##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM91448490v1 #!genome-build-accession NCBI_Assembly:GCF_914484905.1 #!annotation-date 08/30/2025 10:54:38 #!annotation-source NCBI RefSeq GCF_914484905.1-RS_2025_08_30 ##sequence-region NZ_CAJZAO010000001.1 1 23919 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000001.1 RefSeq region 1 23919 . + . ID=NZ_CAJZAO010000001.1:1..23919;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_1 NZ_CAJZAO010000001.1 RefSeq gene 170 1719 . + . ID=gene-LDO50_RS00005;Name=LDO50_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00005;old_locus_tag=BVI1335_10002;partial=true;start_range=.,170 NZ_CAJZAO010000001.1 Protein Homology CDS 170 1719 . + 2 ID=cds-WP_443797693.1;Parent=gene-LDO50_RS00005;Dbxref=GenBank:WP_443797693.1;Name=WP_443797693.1;Ontology_term=GO:0015474,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=autotransporter activity|0015474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883278.1;locus_tag=LDO50_RS00005;partial=true;product=autotransporter family protein;protein_id=WP_443797693.1;start_range=.,170;transl_table=11 NZ_CAJZAO010000001.1 RefSeq gene 1837 2562 . - . ID=gene-LDO50_RS00010;Name=LDO50_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00010;old_locus_tag=BVI1335_10003 NZ_CAJZAO010000001.1 Protein Homology CDS 1837 2562 . - 0 ID=cds-WP_011883277.1;Parent=gene-LDO50_RS00010;Dbxref=GenBank:WP_011883277.1;Name=WP_011883277.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=LDO50_RS00010;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_011883277.1;transl_table=11 NZ_CAJZAO010000001.1 RefSeq gene 2559 3236 . - . ID=gene-LDO50_RS00015;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=LDO50_RS00015;old_locus_tag=BVI1335_10004 NZ_CAJZAO010000001.1 Protein Homology CDS 2559 3236 . - 0 ID=cds-WP_011883276.1;Parent=gene-LDO50_RS00015;Dbxref=GenBank:WP_011883276.1;Name=WP_011883276.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025271.1;locus_tag=LDO50_RS00015;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_011883276.1;transl_table=11 NZ_CAJZAO010000001.1 RefSeq gene 3236 3976 . - . ID=gene-LDO50_RS00020;Name=LDO50_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00020;old_locus_tag=BVI1335_10005 NZ_CAJZAO010000001.1 Protein Homology CDS 3236 3976 . - 0 ID=cds-WP_011883275.1;Parent=gene-LDO50_RS00020;Dbxref=GenBank:WP_011883275.1;Name=WP_011883275.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601464.1;locus_tag=LDO50_RS00020;product=amino acid ABC transporter permease;protein_id=WP_011883275.1;transl_table=11 NZ_CAJZAO010000001.1 RefSeq gene 4061 4954 . - . ID=gene-LDO50_RS00025;Name=LDO50_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00025;old_locus_tag=BVI1335_10006 NZ_CAJZAO010000001.1 Protein Homology CDS 4061 4954 . - 0 ID=cds-WP_011883274.1;Parent=gene-LDO50_RS00025;Dbxref=GenBank:WP_011883274.1;Name=WP_011883274.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889082.1;locus_tag=LDO50_RS00025;product=glutamate/aspartate ABC transporter substrate-binding protein;protein_id=WP_011883274.1;transl_table=11 NZ_CAJZAO010000001.1 RefSeq gene 5207 6493 . - . ID=gene-LDO50_RS00030;Name=LDO50_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00030;old_locus_tag=BVI1335_10007 NZ_CAJZAO010000001.1 Protein Homology CDS 5207 6493 . - 0 ID=cds-WP_011883273.1;Parent=gene-LDO50_RS00030;Dbxref=GenBank:WP_011883273.1;Name=WP_011883273.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898081.1;locus_tag=LDO50_RS00030;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_011883273.1;transl_table=11 NZ_CAJZAO010000001.1 RefSeq gene 7013 7966 . - . ID=gene-LDO50_RS00035;Name=LDO50_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00035;old_locus_tag=BVI1335_10009 NZ_CAJZAO010000001.1 Protein Homology CDS 7013 7966 . - 0 ID=cds-WP_011883272.1;Parent=gene-LDO50_RS00035;Dbxref=GenBank:WP_011883272.1;Name=WP_011883272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413390.1;locus_tag=LDO50_RS00035;product=LysR substrate-binding domain-containing protein;protein_id=WP_011883272.1;transl_table=11 NZ_CAJZAO010000001.1 RefSeq gene 8169 9557 . + . ID=gene-LDO50_RS00040;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=LDO50_RS00040;old_locus_tag=BVI1335_10010 NZ_CAJZAO010000001.1 Protein Homology CDS 8169 9557 . + 0 ID=cds-WP_224019285.1;Parent=gene-LDO50_RS00040;Dbxref=GenBank:WP_224019285.1;Name=WP_224019285.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908754.1;locus_tag=LDO50_RS00040;product=adenylosuccinate lyase;protein_id=WP_224019285.1;transl_table=11 NZ_CAJZAO010000001.1 RefSeq gene 9667 10170 . - . ID=gene-LDO50_RS00045;Name=LDO50_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00045;old_locus_tag=BVI1335_10011 NZ_CAJZAO010000001.1 Protein Homology CDS 9667 10170 . - 0 ID=cds-WP_011883270.1;Parent=gene-LDO50_RS00045;Dbxref=GenBank:WP_011883270.1;Name=WP_011883270.1;Ontology_term=GO:0046177,GO:0005524,GO:0046316;gbkey=CDS;go_function=ATP binding|0005524||IEA,gluconokinase activity|0046316||IEA;go_process=obsolete D-gluconate catabolic process|0046177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753807.1;locus_tag=LDO50_RS00045;product=gluconokinase;protein_id=WP_011883270.1;transl_table=11 NZ_CAJZAO010000001.1 RefSeq gene 10184 11545 . - . ID=gene-LDO50_RS00050;Name=LDO50_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00050;old_locus_tag=BVI1335_10012 NZ_CAJZAO010000001.1 Protein Homology CDS 10184 11545 . - 0 ID=cds-WP_046422617.1;Parent=gene-LDO50_RS00050;Dbxref=GenBank:WP_046422617.1;Name=WP_046422617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600646.1;locus_tag=LDO50_RS00050;product=GntP family permease;protein_id=WP_046422617.1;transl_table=11 NZ_CAJZAO010000001.1 RefSeq gene 11767 12393 . - . ID=gene-LDO50_RS00055;Name=eda;gbkey=Gene;gene=eda;gene_biotype=protein_coding;locus_tag=LDO50_RS00055;old_locus_tag=BVI1335_10013 NZ_CAJZAO010000001.1 Protein Homology CDS 11767 12393 . - 0 ID=cds-WP_011883268.1;Parent=gene-LDO50_RS00055;Dbxref=GenBank:WP_011883268.1;Name=WP_011883268.1;Ontology_term=GO:0009255,GO:0008675,GO:0008700;gbkey=CDS;gene=eda;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA,(R%2CS)-4-hydroxy-2-oxoglutarate aldolase activity|0008700||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760216.1;locus_tag=LDO50_RS00055;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_011883268.1;transl_table=11 NZ_CAJZAO010000001.1 RefSeq gene 12413 14269 . - . ID=gene-LDO50_RS00060;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=LDO50_RS00060;old_locus_tag=BVI1335_10014 NZ_CAJZAO010000001.1 Protein Homology CDS 12413 14269 . - 0 ID=cds-WP_059461819.1;Parent=gene-LDO50_RS00060;Dbxref=GenBank:WP_059461819.1;Name=WP_059461819.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009903961.1;locus_tag=LDO50_RS00060;product=phosphogluconate dehydratase;protein_id=WP_059461819.1;transl_table=11 NZ_CAJZAO010000001.1 RefSeq gene 14565 15413 . + . ID=gene-LDO50_RS00065;Name=LDO50_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00065;old_locus_tag=BVI1335_10015 NZ_CAJZAO010000001.1 Protein Homology CDS 14565 15413 . + 0 ID=cds-WP_011883266.1;Parent=gene-LDO50_RS00065;Dbxref=GenBank:WP_011883266.1;Name=WP_011883266.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476919.1;locus_tag=LDO50_RS00065;product=MurR/RpiR family transcriptional regulator;protein_id=WP_011883266.1;transl_table=11 NZ_CAJZAO010000001.1 RefSeq gene 15501 15923 . - . ID=gene-LDO50_RS00070;Name=LDO50_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00070;old_locus_tag=BVI1335_10016 NZ_CAJZAO010000001.1 Protein Homology CDS 15501 15923 . - 0 ID=cds-WP_014722442.1;Parent=gene-LDO50_RS00070;Dbxref=GenBank:WP_014722442.1;Name=WP_014722442.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483416.1;locus_tag=LDO50_RS00070;product=CopD family protein;protein_id=WP_014722442.1;transl_table=11 NZ_CAJZAO010000001.1 RefSeq gene 15941 17212 . - . ID=gene-LDO50_RS00075;Name=LDO50_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00075;old_locus_tag=BVI1335_10017 NZ_CAJZAO010000001.1 Protein Homology CDS 15941 17212 . - 0 ID=cds-WP_011883264.1;Parent=gene-LDO50_RS00075;Dbxref=GenBank:WP_011883264.1;Name=WP_011883264.1;Ontology_term=GO:0055129,GO:0004350,GO:0016620;gbkey=CDS;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413382.1;locus_tag=LDO50_RS00075;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_011883264.1;transl_table=11 NZ_CAJZAO010000001.1 RefSeq gene 17351 18445 . - . ID=gene-LDO50_RS00080;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=LDO50_RS00080;old_locus_tag=BVI1335_10018 NZ_CAJZAO010000001.1 Protein Homology CDS 17351 18445 . - 0 ID=cds-WP_034194160.1;Parent=gene-LDO50_RS00080;Dbxref=GenBank:WP_034194160.1;Name=WP_034194160.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400342.1;locus_tag=LDO50_RS00080;product=DNA polymerase III subunit delta;protein_id=WP_034194160.1;transl_table=11 NZ_CAJZAO010000001.1 RefSeq gene 18464 19018 . - . ID=gene-LDO50_RS00085;Name=LDO50_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00085;old_locus_tag=BVI1335_10019 NZ_CAJZAO010000001.1 Protein Homology CDS 18464 19018 . - 0 ID=cds-WP_014722440.1;Parent=gene-LDO50_RS00085;Dbxref=GenBank:WP_014722440.1;Name=WP_014722440.1;Ontology_term=GO:0015920,GO:0043165,GO:0001530;gbkey=CDS;go_function=lipopolysaccharide binding|0001530||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765183.1;locus_tag=LDO50_RS00085;product=LPS-assembly lipoprotein LptE;protein_id=WP_014722440.1;transl_table=11 NZ_CAJZAO010000001.1 RefSeq gene 19057 21651 . - . ID=gene-LDO50_RS00090;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=LDO50_RS00090;old_locus_tag=BVI1335_10020 NZ_CAJZAO010000001.1 Protein Homology CDS 19057 21651 . - 0 ID=cds-WP_224019286.1;Parent=gene-LDO50_RS00090;Dbxref=GenBank:WP_224019286.1;Name=WP_224019286.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363082.1;locus_tag=LDO50_RS00090;product=leucine--tRNA ligase;protein_id=WP_224019286.1;transl_table=11 NZ_CAJZAO010000001.1 RefSeq gene 21933 22388 . - . ID=gene-LDO50_RS00095;Name=LDO50_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00095;old_locus_tag=BVI1335_10021 NZ_CAJZAO010000001.1 Protein Homology CDS 21933 22388 . - 0 ID=cds-WP_011883260.1;Parent=gene-LDO50_RS00095;Dbxref=GenBank:WP_011883260.1;Name=WP_011883260.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883260.1;locus_tag=LDO50_RS00095;product=ExbD/TolR family protein;protein_id=WP_011883260.1;transl_table=11 NZ_CAJZAO010000001.1 RefSeq gene 22411 23082 . - . ID=gene-LDO50_RS00100;Name=LDO50_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00100;old_locus_tag=BVI1335_10022 NZ_CAJZAO010000001.1 Protein Homology CDS 22411 23082 . - 0 ID=cds-WP_224019287.1;Parent=gene-LDO50_RS00100;Dbxref=GenBank:WP_224019287.1;Name=WP_224019287.1;Ontology_term=GO:0015031,GO:0015252,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=proton channel activity|0015252||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883259.1;locus_tag=LDO50_RS00100;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_224019287.1;transl_table=11 NZ_CAJZAO010000001.1 RefSeq gene 23102 23635 . - . ID=gene-LDO50_RS00105;Name=dapB;end_range=23635,.;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=LDO50_RS00105;old_locus_tag=BVI1335_10023;partial=true NZ_CAJZAO010000001.1 Protein Homology CDS 23102 23635 . - 0 ID=cds-WP_224023798.1;Parent=gene-LDO50_RS00105;Dbxref=GenBank:WP_224023798.1;Name=WP_224023798.1;Ontology_term=GO:0009089,GO:0008839;end_range=23635,.;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762730.1;locus_tag=LDO50_RS00105;partial=true;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_224023798.1;transl_table=11 NZ_CAJZAO010000001.1 RefSeq pseudogene 23646 23781 . - . ID=gene-LDO50_RS31190;Name=LDO50_RS31190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31190;partial=true;pseudo=true;start_range=.,23646 NZ_CAJZAO010000001.1 Protein Homology CDS 23646 23781 . - 0 ID=cds-LDO50_RS31190;Parent=gene-LDO50_RS31190;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007588549.1;locus_tag=LDO50_RS31190;partial=true;product=4-hydroxy-tetrahydrodipicolinate reductase;pseudo=true;start_range=.,23646;transl_table=11 NZ_CAJZAO010000001.1 RefSeq pseudogene 23848 23919 . - . ID=gene-LDO50_RS00110;Name=LDO50_RS00110;end_range=23919,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS00110;partial=true;pseudo=true NZ_CAJZAO010000001.1 Protein Homology CDS 23848 23919 . - 0 ID=cds-LDO50_RS00110;Parent=gene-LDO50_RS00110;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=23919,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496725.1;locus_tag=LDO50_RS00110;partial=true;product=cell envelope protein SmpA;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000002.1 1 8702 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000002.1 RefSeq region 1 8702 . + . ID=NZ_CAJZAO010000002.1:1..8702;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_10 NZ_CAJZAO010000002.1 RefSeq gene 1 675 . + . ID=gene-LDO50_RS00115;Name=LDO50_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00115;old_locus_tag=BVI1335_100001;partial=true;start_range=.,1 NZ_CAJZAO010000002.1 Protein Homology CDS 1 675 . + 0 ID=cds-WP_224019288.1;Parent=gene-LDO50_RS00115;Dbxref=GenBank:WP_224019288.1;Name=WP_224019288.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883234.1;locus_tag=LDO50_RS00115;partial=true;product=SDR family oxidoreductase;protein_id=WP_224019288.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000002.1 RefSeq gene 787 1782 . + . ID=gene-LDO50_RS00120;Name=LDO50_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00120;old_locus_tag=BVI1335_100002 NZ_CAJZAO010000002.1 Protein Homology CDS 787 1782 . + 0 ID=cds-WP_059455097.1;Parent=gene-LDO50_RS00120;Dbxref=GenBank:WP_059455097.1;Name=WP_059455097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761975.1;locus_tag=LDO50_RS00120;product=arabinose ABC transporter substrate-binding protein;protein_id=WP_059455097.1;transl_table=11 NZ_CAJZAO010000002.1 RefSeq gene 1858 3369 . + . ID=gene-LDO50_RS00125;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=LDO50_RS00125;old_locus_tag=BVI1335_100003 NZ_CAJZAO010000002.1 Protein Homology CDS 1858 3369 . + 0 ID=cds-WP_011883236.1;Parent=gene-LDO50_RS00125;Dbxref=GenBank:WP_011883236.1;Name=WP_011883236.1;Ontology_term=GO:0042882,GO:0005524,GO:0015612,GO:0016020;gbkey=CDS;gene=araG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type L-arabinose transporter activity|0015612||IEA;go_process=L-arabinose transmembrane transport|0042882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350895.1;locus_tag=LDO50_RS00125;product=L-arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_011883236.1;transl_table=11 NZ_CAJZAO010000002.1 RefSeq gene 3449 4465 . + . ID=gene-LDO50_RS00130;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=LDO50_RS00130;old_locus_tag=BVI1335_100004 NZ_CAJZAO010000002.1 Protein Homology CDS 3449 4465 . + 0 ID=cds-WP_224019289.1;Parent=gene-LDO50_RS00130;Dbxref=GenBank:WP_224019289.1;Name=WP_224019289.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=araH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025224.1;locus_tag=LDO50_RS00130;product=L-arabinose ABC transporter permease AraH;protein_id=WP_224019289.1;transl_table=11 NZ_CAJZAO010000002.1 RefSeq gene 4489 5286 . + . ID=gene-LDO50_RS00135;Name=LDO50_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00135;old_locus_tag=BVI1335_100005 NZ_CAJZAO010000002.1 Protein Homology CDS 4489 5286 . + 0 ID=cds-WP_224019290.1;Parent=gene-LDO50_RS00135;Dbxref=GenBank:WP_224019290.1;Name=WP_224019290.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400374.1;locus_tag=LDO50_RS00135;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_224019290.1;transl_table=11 NZ_CAJZAO010000002.1 RefSeq gene 5360 6421 . + . ID=gene-LDO50_RS00140;Name=LDO50_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00140;old_locus_tag=BVI1335_100006 NZ_CAJZAO010000002.1 Protein Homology CDS 5360 6421 . + 0 ID=cds-WP_059740377.1;Parent=gene-LDO50_RS00140;Dbxref=GenBank:WP_059740377.1;Name=WP_059740377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476953.1;locus_tag=LDO50_RS00140;product=aldose 1-epimerase;protein_id=WP_059740377.1;transl_table=11 NZ_CAJZAO010000002.1 RefSeq gene 6461 7288 . + . ID=gene-LDO50_RS00145;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=LDO50_RS00145;old_locus_tag=BVI1335_100007 NZ_CAJZAO010000002.1 Protein Homology CDS 6461 7288 . + 0 ID=cds-WP_011883240.1;Parent=gene-LDO50_RS00145;Dbxref=GenBank:WP_011883240.1;Name=WP_011883240.1;Ontology_term=GO:0006221,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009971072.1;locus_tag=LDO50_RS00145;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_011883240.1;transl_table=11 NZ_CAJZAO010000002.1 RefSeq gene 7564 8064 . - . ID=gene-LDO50_RS00150;Name=LDO50_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00150;old_locus_tag=BVI1335_100008 NZ_CAJZAO010000002.1 Protein Homology CDS 7564 8064 . - 0 ID=cds-WP_011883241.1;Parent=gene-LDO50_RS00150;Dbxref=GenBank:WP_011883241.1;Name=WP_011883241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333528.1;locus_tag=LDO50_RS00150;product=CinA family protein;protein_id=WP_011883241.1;transl_table=11 NZ_CAJZAO010000002.1 RefSeq gene 8096 8641 . - . ID=gene-LDO50_RS00155;Name=LDO50_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00155;old_locus_tag=BVI1335_100010 NZ_CAJZAO010000002.1 Protein Homology CDS 8096 8641 . - 0 ID=cds-WP_034194167.1;Parent=gene-LDO50_RS00155;Dbxref=GenBank:WP_034194167.1;Name=WP_034194167.1;Ontology_term=GO:0006644,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=phospholipid metabolic process|0006644||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415689.1;locus_tag=LDO50_RS00155;product=phosphatidylglycerophosphatase A family protein;protein_id=WP_034194167.1;transl_table=11 ##sequence-region NZ_CAJZAO010000003.1 1 5273 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000003.1 RefSeq region 1 5273 . + . ID=NZ_CAJZAO010000003.1:1..5273;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_100 NZ_CAJZAO010000003.1 RefSeq gene 5 117 . - . ID=gene-LDO50_RS00160;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LDO50_RS00160;old_locus_tag=BVI1335_RRNA4 NZ_CAJZAO010000003.1 cmsearch rRNA 5 117 . - . ID=rna-LDO50_RS00160;Parent=gene-LDO50_RS00160;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO50_RS00160;product=5S ribosomal RNA NZ_CAJZAO010000003.1 cmsearch exon 5 117 . - . ID=exon-LDO50_RS00160-1;Parent=rna-LDO50_RS00160;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO50_RS00160;product=5S ribosomal RNA NZ_CAJZAO010000003.1 RefSeq gene 272 3153 . - . ID=gene-LDO50_RS00165;Name=LDO50_RS00165;gbkey=Gene;gene_biotype=rRNA;locus_tag=LDO50_RS00165;old_locus_tag=BVI1335_RRNA2 NZ_CAJZAO010000003.1 cmsearch rRNA 272 3153 . - . ID=rna-LDO50_RS00165;Parent=gene-LDO50_RS00165;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO50_RS00165;product=23S ribosomal RNA NZ_CAJZAO010000003.1 cmsearch exon 272 3153 . - . ID=exon-LDO50_RS00165-1;Parent=rna-LDO50_RS00165;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO50_RS00165;product=23S ribosomal RNA NZ_CAJZAO010000003.1 RefSeq gene 3364 3439 . - . ID=gene-LDO50_RS00170;Name=LDO50_RS00170;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS00170;old_locus_tag=BVI1335_TRNA32 NZ_CAJZAO010000003.1 tRNAscan-SE tRNA 3364 3439 . - . ID=rna-LDO50_RS00170;Parent=gene-LDO50_RS00170;anticodon=(pos:complement(3404..3406));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS00170;product=tRNA-Ala NZ_CAJZAO010000003.1 tRNAscan-SE exon 3364 3439 . - . ID=exon-LDO50_RS00170-1;Parent=rna-LDO50_RS00170;anticodon=(pos:complement(3404..3406));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS00170;product=tRNA-Ala NZ_CAJZAO010000003.1 RefSeq gene 3478 3554 . - . ID=gene-LDO50_RS00175;Name=LDO50_RS00175;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS00175;old_locus_tag=BVI1335_TRNA31 NZ_CAJZAO010000003.1 tRNAscan-SE tRNA 3478 3554 . - . ID=rna-LDO50_RS00175;Parent=gene-LDO50_RS00175;anticodon=(pos:complement(3518..3520));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS00175;product=tRNA-Ile NZ_CAJZAO010000003.1 tRNAscan-SE exon 3478 3554 . - . ID=exon-LDO50_RS00175-1;Parent=rna-LDO50_RS00175;anticodon=(pos:complement(3518..3520));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS00175;product=tRNA-Ile NZ_CAJZAO010000003.1 RefSeq gene 3618 5150 . - . ID=gene-LDO50_RS00180;Name=LDO50_RS00180;gbkey=Gene;gene_biotype=rRNA;locus_tag=LDO50_RS00180;old_locus_tag=BVI1335_RRNA3 NZ_CAJZAO010000003.1 cmsearch rRNA 3618 5150 . - . ID=rna-LDO50_RS00180;Parent=gene-LDO50_RS00180;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO50_RS00180;product=16S ribosomal RNA NZ_CAJZAO010000003.1 cmsearch exon 3618 5150 . - . ID=exon-LDO50_RS00180-1;Parent=rna-LDO50_RS00180;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO50_RS00180;product=16S ribosomal RNA ##sequence-region NZ_CAJZAO010000004.1 1 98568 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000004.1 RefSeq region 1 98568 . + . ID=NZ_CAJZAO010000004.1:1..98568;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_101 NZ_CAJZAO010000004.1 RefSeq gene 1 458 . + . ID=gene-LDO50_RS00185;Name=LDO50_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00185;old_locus_tag=BVI1335_1010001;partial=true;start_range=.,1 NZ_CAJZAO010000004.1 Protein Homology CDS 1 458 . + 2 ID=cds-WP_224019291.1;Parent=gene-LDO50_RS00185;Dbxref=GenBank:WP_224019291.1;Name=WP_224019291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189239.1;locus_tag=LDO50_RS00185;partial=true;product=aminopeptidase N C-terminal domain-containing protein;protein_id=WP_224019291.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 673 1686 . + . ID=gene-LDO50_RS00190;Name=LDO50_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00190;old_locus_tag=BVI1335_1010002 NZ_CAJZAO010000004.1 Protein Homology CDS 673 1686 . + 0 ID=cds-WP_011883759.1;Parent=gene-LDO50_RS00190;Dbxref=GenBank:WP_011883759.1;Name=WP_011883759.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400763.1;locus_tag=LDO50_RS00190;product=class 1 fructose-bisphosphatase;protein_id=WP_011883759.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 1898 1973 . + . ID=gene-LDO50_RS00195;Name=LDO50_RS00195;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS00195;old_locus_tag=BVI1335_TRNA8 NZ_CAJZAO010000004.1 tRNAscan-SE tRNA 1898 1973 . + . ID=rna-LDO50_RS00195;Parent=gene-LDO50_RS00195;anticodon=(pos:1931..1933);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS00195;product=tRNA-Thr NZ_CAJZAO010000004.1 tRNAscan-SE exon 1898 1973 . + . ID=exon-LDO50_RS00195-1;Parent=rna-LDO50_RS00195;anticodon=(pos:1931..1933);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS00195;product=tRNA-Thr NZ_CAJZAO010000004.1 RefSeq gene 2375 2629 . + . ID=gene-LDO50_RS00200;Name=LDO50_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00200;old_locus_tag=BVI1335_1010004 NZ_CAJZAO010000004.1 Protein Homology CDS 2375 2629 . + 0 ID=cds-WP_006476609.1;Parent=gene-LDO50_RS00200;Dbxref=GenBank:WP_006476609.1;Name=WP_006476609.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897763.1;locus_tag=LDO50_RS00200;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_006476609.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 2715 3200 . - . ID=gene-LDO50_RS00205;Name=LDO50_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00205;old_locus_tag=BVI1335_1010005 NZ_CAJZAO010000004.1 Protein Homology CDS 2715 3200 . - 0 ID=cds-WP_011883757.1;Parent=gene-LDO50_RS00205;Dbxref=GenBank:WP_011883757.1;Name=WP_011883757.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897764.1;locus_tag=LDO50_RS00205;product=TlpA family protein disulfide reductase;protein_id=WP_011883757.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 3197 4474 . - . ID=gene-LDO50_RS00210;Name=LDO50_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00210;old_locus_tag=BVI1335_1010006 NZ_CAJZAO010000004.1 Protein Homology CDS 3197 4474 . - 0 ID=cds-WP_224019292.1;Parent=gene-LDO50_RS00210;Dbxref=GenBank:WP_224019292.1;Name=WP_224019292.1;Ontology_term=GO:0005975,GO:0004308;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897765.1;locus_tag=LDO50_RS00210;product=sialidase family protein;protein_id=WP_224019292.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 4462 6822 . - . ID=gene-LDO50_RS00215;Name=LDO50_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00215;old_locus_tag=BVI1335_1010007 NZ_CAJZAO010000004.1 Protein Homology CDS 4462 6822 . - 0 ID=cds-WP_059896173.1;Parent=gene-LDO50_RS00215;Dbxref=GenBank:WP_059896173.1;Name=WP_059896173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656231.1;locus_tag=LDO50_RS00215;product=TonB-dependent receptor;protein_id=WP_059896173.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 6951 7340 . - . ID=gene-LDO50_RS00220;Name=LDO50_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00220;old_locus_tag=BVI1335_1010008 NZ_CAJZAO010000004.1 Protein Homology CDS 6951 7340 . - 0 ID=cds-WP_224019304.1;Parent=gene-LDO50_RS00220;Dbxref=GenBank:WP_224019304.1;Name=WP_224019304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756196.1;locus_tag=LDO50_RS00220;product=DUF2946 domain-containing protein;protein_id=WP_224019304.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 7540 7686 . + . ID=gene-LDO50_RS00225;Name=LDO50_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00225 NZ_CAJZAO010000004.1 Protein Homology CDS 7540 7686 . + 0 ID=cds-WP_006476612.1;Parent=gene-LDO50_RS00225;Dbxref=GenBank:WP_006476612.1;Name=WP_006476612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010105617.1;locus_tag=LDO50_RS00225;product=hypothetical protein;protein_id=WP_006476612.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 7910 8503 . + . ID=gene-LDO50_RS00230;Name=LDO50_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00230;old_locus_tag=BVI1335_1010010 NZ_CAJZAO010000004.1 Protein Homology CDS 7910 8503 . + 0 ID=cds-WP_011883744.1;Parent=gene-LDO50_RS00230;Dbxref=GenBank:WP_011883744.1;Name=WP_011883744.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476613.1;locus_tag=LDO50_RS00230;product=chorismate mutase;protein_id=WP_011883744.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 8540 9667 . - . ID=gene-LDO50_RS00235;Name=LDO50_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00235;old_locus_tag=BVI1335_1010011 NZ_CAJZAO010000004.1 Protein Homology CDS 8540 9667 . - 0 ID=cds-WP_045579362.1;Parent=gene-LDO50_RS00235;Dbxref=GenBank:WP_045579362.1;Name=WP_045579362.1;Ontology_term=GO:0004527;gbkey=CDS;go_function=exonuclease activity|0004527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496574.1;locus_tag=LDO50_RS00235;product=exonuclease domain-containing protein;protein_id=WP_045579362.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 9828 10031 . - . ID=gene-LDO50_RS00240;Name=LDO50_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00240;old_locus_tag=BVI1335_1010012 NZ_CAJZAO010000004.1 Protein Homology CDS 9828 10031 . - 0 ID=cds-WP_011883742.1;Parent=gene-LDO50_RS00240;Dbxref=GenBank:WP_011883742.1;Name=WP_011883742.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016687461.1;locus_tag=LDO50_RS00240;product=cold-shock protein;protein_id=WP_011883742.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 10423 10683 . + . ID=gene-LDO50_RS00245;Name=LDO50_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00245;old_locus_tag=BVI1335_1010014 NZ_CAJZAO010000004.1 Protein Homology CDS 10423 10683 . + 0 ID=cds-WP_045579363.1;Parent=gene-LDO50_RS00245;Dbxref=GenBank:WP_045579363.1;Name=WP_045579363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722650.1;locus_tag=LDO50_RS00245;product=hypothetical protein;protein_id=WP_045579363.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 11204 12346 . + . ID=gene-LDO50_RS00250;Name=LDO50_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00250;old_locus_tag=BVI1335_1010015 NZ_CAJZAO010000004.1 Protein Homology CDS 11204 12346 . + 0 ID=cds-WP_014722649.1;Parent=gene-LDO50_RS00250;Dbxref=GenBank:WP_014722649.1;Name=WP_014722649.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194869.1;locus_tag=LDO50_RS00250;product=porin;protein_id=WP_014722649.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 12432 12995 . - . ID=gene-LDO50_RS00255;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=LDO50_RS00255;old_locus_tag=BVI1335_1010016 NZ_CAJZAO010000004.1 Protein Homology CDS 12432 12995 . - 0 ID=cds-WP_011883732.1;Parent=gene-LDO50_RS00255;Dbxref=GenBank:WP_011883732.1;Name=WP_011883732.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185709.1;locus_tag=LDO50_RS00255;product=transcription elongation factor GreB;protein_id=WP_011883732.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 13293 15659 . - . ID=gene-LDO50_RS00260;Name=LDO50_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00260;old_locus_tag=BVI1335_1010018 NZ_CAJZAO010000004.1 Protein Homology CDS 13293 15659 . - 0 ID=cds-WP_011883730.1;Parent=gene-LDO50_RS00260;Dbxref=GenBank:WP_011883730.1;Name=WP_011883730.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194871.1;locus_tag=LDO50_RS00260;product=RelA/SpoT family protein;protein_id=WP_011883730.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 15723 15926 . - . ID=gene-LDO50_RS00265;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=LDO50_RS00265;old_locus_tag=BVI1335_1010019 NZ_CAJZAO010000004.1 Protein Homology CDS 15723 15926 . - 0 ID=cds-WP_006025620.1;Parent=gene-LDO50_RS00265;Dbxref=GenBank:WP_006025620.1;Name=WP_006025620.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008921215.1;locus_tag=LDO50_RS00265;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_006025620.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 15985 16668 . - . ID=gene-LDO50_RS00270;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=LDO50_RS00270;old_locus_tag=BVI1335_1010020 NZ_CAJZAO010000004.1 Protein Homology CDS 15985 16668 . - 0 ID=cds-WP_011883728.1;Parent=gene-LDO50_RS00270;Dbxref=GenBank:WP_011883728.1;Name=WP_011883728.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486663.1;locus_tag=LDO50_RS00270;product=guanylate kinase;protein_id=WP_011883728.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 16739 17662 . - . ID=gene-LDO50_RS00275;Name=LDO50_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00275;old_locus_tag=BVI1335_1010021 NZ_CAJZAO010000004.1 Protein Homology CDS 16739 17662 . - 0 ID=cds-WP_011883726.1;Parent=gene-LDO50_RS00275;Dbxref=GenBank:WP_011883726.1;Name=WP_011883726.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333042.1;locus_tag=LDO50_RS00275;product=YicC/YloC family endoribonuclease;protein_id=WP_011883726.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 17837 18577 . + . ID=gene-LDO50_RS00280;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=LDO50_RS00280;old_locus_tag=BVI1335_1010022 NZ_CAJZAO010000004.1 Protein Homology CDS 17837 18577 . + 0 ID=cds-WP_011883725.1;Parent=gene-LDO50_RS00280;Dbxref=GenBank:WP_011883725.1;Name=WP_011883725.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883725.1;locus_tag=LDO50_RS00280;product=ribonuclease PH;protein_id=WP_011883725.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 18570 19199 . + . ID=gene-LDO50_RS00285;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=LDO50_RS00285;old_locus_tag=BVI1335_1010023 NZ_CAJZAO010000004.1 Protein Homology CDS 18570 19199 . + 0 ID=cds-WP_011883723.1;Parent=gene-LDO50_RS00285;Dbxref=GenBank:WP_011883723.1;Name=WP_011883723.1;Ontology_term=GO:0006281,GO:0035870,GO:0036222;gbkey=CDS;gene=rdgB;go_function=dITP diphosphatase activity|0035870||IEA,XTP diphosphatase activity|0036222||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656221.1;locus_tag=LDO50_RS00285;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=WP_011883723.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 19234 20448 . + . ID=gene-LDO50_RS00290;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=LDO50_RS00290;old_locus_tag=BVI1335_1010024 NZ_CAJZAO010000004.1 Protein Homology CDS 19234 20448 . + 0 ID=cds-WP_059475599.1;Parent=gene-LDO50_RS00290;Dbxref=GenBank:WP_059475599.1;Name=WP_059475599.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496579.1;locus_tag=LDO50_RS00290;product=radical SAM family heme chaperone HemW;protein_id=WP_059475599.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 20492 20579 . + . ID=gene-LDO50_RS00295;Name=LDO50_RS00295;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS00295;old_locus_tag=BVI1335_TRNA9 NZ_CAJZAO010000004.1 tRNAscan-SE tRNA 20492 20579 . + . ID=rna-LDO50_RS00295;Parent=gene-LDO50_RS00295;anticodon=(pos:20526..20528);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS00295;product=tRNA-Ser NZ_CAJZAO010000004.1 tRNAscan-SE exon 20492 20579 . + . ID=exon-LDO50_RS00295-1;Parent=rna-LDO50_RS00295;anticodon=(pos:20526..20528);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS00295;product=tRNA-Ser NZ_CAJZAO010000004.1 RefSeq gene 20730 21131 . + . ID=gene-LDO50_RS00300;Name=LDO50_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00300;old_locus_tag=BVI1335_1010025 NZ_CAJZAO010000004.1 Protein Homology CDS 20730 21131 . + 0 ID=cds-WP_011883719.1;Parent=gene-LDO50_RS00300;Dbxref=GenBank:WP_011883719.1;Name=WP_011883719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656219.1;locus_tag=LDO50_RS00300;product=hypothetical protein;protein_id=WP_011883719.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 21322 21615 . + . ID=gene-LDO50_RS00305;Name=LDO50_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00305;old_locus_tag=BVI1335_1010026 NZ_CAJZAO010000004.1 Protein Homology CDS 21322 21615 . + 0 ID=cds-WP_011883717.1;Parent=gene-LDO50_RS00305;Dbxref=GenBank:WP_011883717.1;Name=WP_011883717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400790.1;locus_tag=LDO50_RS00305;product=hypothetical protein;protein_id=WP_011883717.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 21793 22284 . + . ID=gene-LDO50_RS00310;Name=LDO50_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00310;old_locus_tag=BVI1335_1010027 NZ_CAJZAO010000004.1 Protein Homology CDS 21793 22284 . + 0 ID=cds-WP_011883716.1;Parent=gene-LDO50_RS00310;Dbxref=GenBank:WP_011883716.1;Name=WP_011883716.1;Ontology_term=GO:0031992,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=energy transducer activity|0031992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544846.1;locus_tag=LDO50_RS00310;product=energy transducer TonB family protein;protein_id=WP_011883716.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 22573 23883 . + . ID=gene-LDO50_RS00315;Name=LDO50_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00315;old_locus_tag=BVI1335_1010028 NZ_CAJZAO010000004.1 Protein Homology CDS 22573 23883 . + 0 ID=cds-WP_045579505.1;Parent=gene-LDO50_RS00315;Dbxref=GenBank:WP_045579505.1;Name=WP_045579505.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722645.1;locus_tag=LDO50_RS00315;product=MFS transporter;protein_id=WP_045579505.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 23982 24161 . + . ID=gene-LDO50_RS00320;Name=LDO50_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00320;old_locus_tag=BVI1335_1010029 NZ_CAJZAO010000004.1 Protein Homology CDS 23982 24161 . + 0 ID=cds-WP_011883712.1;Parent=gene-LDO50_RS00320;Dbxref=GenBank:WP_011883712.1;Name=WP_011883712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400794.1;locus_tag=LDO50_RS00320;product=hypothetical protein;protein_id=WP_011883712.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 24196 25194 . - . ID=gene-LDO50_RS00325;Name=waaC;gbkey=Gene;gene=waaC;gene_biotype=protein_coding;locus_tag=LDO50_RS00325;old_locus_tag=BVI1335_1010030 NZ_CAJZAO010000004.1 Protein Homology CDS 24196 25194 . - 0 ID=cds-WP_059460715.1;Parent=gene-LDO50_RS00325;Dbxref=GenBank:WP_059460715.1;Name=WP_059460715.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=waaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750840.1;locus_tag=LDO50_RS00325;product=lipopolysaccharide heptosyltransferase I;protein_id=WP_059460715.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 25368 26954 . + . ID=gene-LDO50_RS00330;Name=LDO50_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00330;old_locus_tag=BVI1335_1010031 NZ_CAJZAO010000004.1 Protein Homology CDS 25368 26954 . + 0 ID=cds-WP_059475597.1;Parent=gene-LDO50_RS00330;Dbxref=GenBank:WP_059475597.1;Name=WP_059475597.1;Ontology_term=GO:0006821,GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722643.1;locus_tag=LDO50_RS00330;product=chloride channel protein;protein_id=WP_059475597.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 27071 27472 . - . ID=gene-LDO50_RS00335;Name=LDO50_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00335;old_locus_tag=BVI1335_1010032 NZ_CAJZAO010000004.1 Protein Homology CDS 27071 27472 . - 0 ID=cds-WP_011883705.1;Parent=gene-LDO50_RS00335;Dbxref=GenBank:WP_011883705.1;Name=WP_011883705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883705.1;locus_tag=LDO50_RS00335;product=YXWGXW repeat-containing protein;protein_id=WP_011883705.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 27632 27886 . - . ID=gene-LDO50_RS00340;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=LDO50_RS00340;old_locus_tag=BVI1335_1010033 NZ_CAJZAO010000004.1 Protein Homology CDS 27632 27886 . - 0 ID=cds-WP_006400798.1;Parent=gene-LDO50_RS00340;Dbxref=GenBank:WP_006400798.1;Name=WP_006400798.1;gbkey=CDS;gene=minE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004628536.1;locus_tag=LDO50_RS00340;product=cell division topological specificity factor MinE;protein_id=WP_006400798.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 27899 28714 . - . ID=gene-LDO50_RS00345;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=LDO50_RS00345;old_locus_tag=BVI1335_1010034 NZ_CAJZAO010000004.1 Protein Homology CDS 27899 28714 . - 0 ID=cds-WP_011883701.1;Parent=gene-LDO50_RS00345;Dbxref=GenBank:WP_011883701.1;Name=WP_011883701.1;Ontology_term=GO:0000918,GO:0016887;gbkey=CDS;gene=minD;go_function=ATP hydrolysis activity|0016887||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025606.1;locus_tag=LDO50_RS00345;product=septum site-determining protein MinD;protein_id=WP_011883701.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 28774 29532 . - . ID=gene-LDO50_RS00350;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=LDO50_RS00350;old_locus_tag=BVI1335_1010035 NZ_CAJZAO010000004.1 Protein Homology CDS 28774 29532 . - 0 ID=cds-WP_034194114.1;Parent=gene-LDO50_RS00350;Dbxref=GenBank:WP_034194114.1;Name=WP_034194114.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328092.1;locus_tag=LDO50_RS00350;product=septum site-determining protein MinC;protein_id=WP_034194114.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 29700 30365 . - . ID=gene-LDO50_RS00355;Name=LDO50_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00355;old_locus_tag=BVI1335_1010036 NZ_CAJZAO010000004.1 Protein Homology CDS 29700 30365 . - 0 ID=cds-WP_224019293.1;Parent=gene-LDO50_RS00355;Dbxref=GenBank:WP_224019293.1;Name=WP_224019293.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486671.1;locus_tag=LDO50_RS00355;product=GNAT family N-acetyltransferase;protein_id=WP_224019293.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 30270 30617 . + . ID=gene-LDO50_RS00360;Name=LDO50_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00360 NZ_CAJZAO010000004.1 GeneMarkS-2+ CDS 30270 30617 . + 0 ID=cds-WP_155624948.1;Parent=gene-LDO50_RS00360;Dbxref=GenBank:WP_155624948.1;Name=WP_155624948.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS00360;product=hypothetical protein;protein_id=WP_155624948.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 30898 32058 . + . ID=gene-LDO50_RS00365;Name=LDO50_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00365;old_locus_tag=BVI1335_1010037 NZ_CAJZAO010000004.1 Protein Homology CDS 30898 32058 . + 0 ID=cds-WP_045579368.1;Parent=gene-LDO50_RS00365;Dbxref=GenBank:WP_045579368.1;Name=WP_045579368.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722638.1;locus_tag=LDO50_RS00365;product=alkane 1-monooxygenase;protein_id=WP_045579368.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 32089 33624 . - . ID=gene-LDO50_RS00370;Name=LDO50_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00370;old_locus_tag=BVI1335_1010038 NZ_CAJZAO010000004.1 Protein Homology CDS 32089 33624 . - 0 ID=cds-WP_045579369.1;Parent=gene-LDO50_RS00370;Dbxref=GenBank:WP_045579369.1;Name=WP_045579369.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883695.1;locus_tag=LDO50_RS00370;product=methyl-accepting chemotaxis protein;protein_id=WP_045579369.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 33870 33960 . - . ID=gene-LDO50_RS00375;Name=LDO50_RS00375;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS00375;old_locus_tag=BVI1335_TRNA30 NZ_CAJZAO010000004.1 tRNAscan-SE tRNA 33870 33960 . - . ID=rna-LDO50_RS00375;Parent=gene-LDO50_RS00375;anticodon=(pos:complement(33924..33926));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS00375;product=tRNA-Ser NZ_CAJZAO010000004.1 tRNAscan-SE exon 33870 33960 . - . ID=exon-LDO50_RS00375-1;Parent=rna-LDO50_RS00375;anticodon=(pos:complement(33924..33926));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS00375;product=tRNA-Ser NZ_CAJZAO010000004.1 RefSeq gene 34077 35378 . - . ID=gene-LDO50_RS00380;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=LDO50_RS00380;old_locus_tag=BVI1335_1010039 NZ_CAJZAO010000004.1 Protein Homology CDS 34077 35378 . - 0 ID=cds-WP_014722636.1;Parent=gene-LDO50_RS00380;Dbxref=GenBank:WP_014722636.1;Name=WP_014722636.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904317.1;locus_tag=LDO50_RS00380;product=serine--tRNA ligase;protein_id=WP_014722636.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 35584 35850 . + . ID=gene-LDO50_RS00385;Name=LDO50_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00385;old_locus_tag=BVI1335_1010040 NZ_CAJZAO010000004.1 Protein Homology CDS 35584 35850 . + 0 ID=cds-WP_045579370.1;Parent=gene-LDO50_RS00385;Dbxref=GenBank:WP_045579370.1;Name=WP_045579370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025601.1;locus_tag=LDO50_RS00385;product=DUF2164 domain-containing protein;protein_id=WP_045579370.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 35879 37189 . - . ID=gene-LDO50_RS00390;Name=LDO50_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00390;old_locus_tag=BVI1335_1010041 NZ_CAJZAO010000004.1 Protein Homology CDS 35879 37189 . - 0 ID=cds-WP_011883689.1;Parent=gene-LDO50_RS00390;Dbxref=GenBank:WP_011883689.1;Name=WP_011883689.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333010.1;locus_tag=LDO50_RS00390;product=replication-associated recombination protein A;protein_id=WP_011883689.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 37358 38047 . - . ID=gene-LDO50_RS00395;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=LDO50_RS00395;old_locus_tag=BVI1335_1010042 NZ_CAJZAO010000004.1 Protein Homology CDS 37358 38047 . - 0 ID=cds-WP_011883687.1;Parent=gene-LDO50_RS00395;Dbxref=GenBank:WP_011883687.1;Name=WP_011883687.1;gbkey=CDS;gene=lolA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750827.1;locus_tag=LDO50_RS00395;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_011883687.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 38094 40403 . - . ID=gene-LDO50_RS00400;Name=LDO50_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00400;old_locus_tag=BVI1335_1010043 NZ_CAJZAO010000004.1 Protein Homology CDS 38094 40403 . - 0 ID=cds-WP_011883685.1;Parent=gene-LDO50_RS00400;Dbxref=GenBank:WP_011883685.1;Name=WP_011883685.1;Ontology_term=GO:0007059,GO:0051301,GO:0003677,GO:0005524,GO:0015616;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,DNA translocase activity|0015616||IEA;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186104.1;locus_tag=LDO50_RS00400;product=DNA translocase FtsK;protein_id=WP_011883685.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 40833 41795 . + . ID=gene-LDO50_RS00405;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=LDO50_RS00405;old_locus_tag=BVI1335_1010046 NZ_CAJZAO010000004.1 Protein Homology CDS 40833 41795 . + 0 ID=cds-WP_224019295.1;Parent=gene-LDO50_RS00405;Dbxref=GenBank:WP_224019295.1;Name=WP_224019295.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333007.1;locus_tag=LDO50_RS00405;product=thioredoxin-disulfide reductase;protein_id=WP_224019295.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 41945 42724 . + . ID=gene-LDO50_RS00410;Name=LDO50_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00410;old_locus_tag=BVI1335_1010045 NZ_CAJZAO010000004.1 Protein Homology CDS 41945 42724 . + 0 ID=cds-WP_014722631.1;Parent=gene-LDO50_RS00410;Dbxref=GenBank:WP_014722631.1;Name=WP_014722631.1;Ontology_term=GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897801.1;locus_tag=LDO50_RS00410;product=Smr/MutS family protein;protein_id=WP_014722631.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 42711 43334 . + . ID=gene-LDO50_RS00415;Name=LDO50_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00415;old_locus_tag=BVI1335_1010047 NZ_CAJZAO010000004.1 Protein Homology CDS 42711 43334 . + 0 ID=cds-WP_011883680.1;Parent=gene-LDO50_RS00415;Dbxref=GenBank:WP_011883680.1;Name=WP_011883680.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333005.1;locus_tag=LDO50_RS00415;product=trimeric intracellular cation channel family protein;protein_id=WP_011883680.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 43445 44563 . - . ID=gene-LDO50_RS00420;Name=LDO50_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00420;old_locus_tag=BVI1335_1010048 NZ_CAJZAO010000004.1 Protein Homology CDS 43445 44563 . - 0 ID=cds-WP_011883678.1;Parent=gene-LDO50_RS00420;Dbxref=GenBank:WP_011883678.1;Name=WP_011883678.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440516.1;locus_tag=LDO50_RS00420;product=ABC transporter ATP-binding protein;protein_id=WP_011883678.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 44674 45531 . - . ID=gene-LDO50_RS00425;Name=LDO50_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00425;old_locus_tag=BVI1335_1010049 NZ_CAJZAO010000004.1 Protein Homology CDS 44674 45531 . - 0 ID=cds-WP_224019297.1;Parent=gene-LDO50_RS00425;Dbxref=GenBank:WP_224019297.1;Name=WP_224019297.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764932.1;locus_tag=LDO50_RS00425;product=carbohydrate ABC transporter permease;protein_id=WP_224019297.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 45521 46459 . - . ID=gene-LDO50_RS00430;Name=LDO50_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00430;old_locus_tag=BVI1335_1010050 NZ_CAJZAO010000004.1 Protein Homology CDS 45521 46459 . - 0 ID=cds-WP_011883674.1;Parent=gene-LDO50_RS00430;Dbxref=GenBank:WP_011883674.1;Name=WP_011883674.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025593.1;locus_tag=LDO50_RS00430;product=carbohydrate ABC transporter permease;protein_id=WP_011883674.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 46598 47845 . - . ID=gene-LDO50_RS00435;Name=LDO50_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00435;old_locus_tag=BVI1335_1010051 NZ_CAJZAO010000004.1 Protein Homology CDS 46598 47845 . - 0 ID=cds-WP_011883672.1;Parent=gene-LDO50_RS00435;Dbxref=GenBank:WP_011883672.1;Name=WP_011883672.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185848.1;locus_tag=LDO50_RS00435;product=ABC transporter substrate-binding protein;protein_id=WP_011883672.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 48273 49742 . + . ID=gene-LDO50_RS00440;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=LDO50_RS00440;old_locus_tag=BVI1335_1010052 NZ_CAJZAO010000004.1 Protein Homology CDS 48273 49742 . + 0 ID=cds-WP_011883670.1;Parent=gene-LDO50_RS00440;Dbxref=GenBank:WP_011883670.1;Name=WP_011883670.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213936.1;locus_tag=LDO50_RS00440;product=glucose-6-phosphate dehydrogenase;protein_id=WP_011883670.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 49829 50509 . + . ID=gene-LDO50_RS00445;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=LDO50_RS00445;old_locus_tag=BVI1335_1010054 NZ_CAJZAO010000004.1 Protein Homology CDS 49829 50509 . + 0 ID=cds-WP_176153352.1;Parent=gene-LDO50_RS00445;Dbxref=GenBank:WP_176153352.1;Name=WP_176153352.1;Ontology_term=GO:0005975,GO:0006098,GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=carbohydrate metabolic process|0005975||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722626.1;locus_tag=LDO50_RS00445;product=6-phosphogluconolactonase;protein_id=WP_176153352.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 50487 52415 . + . ID=gene-LDO50_RS00450;Name=LDO50_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00450;old_locus_tag=BVI1335_1010055 NZ_CAJZAO010000004.1 Protein Homology CDS 50487 52415 . + 0 ID=cds-WP_011883666.1;Parent=gene-LDO50_RS00450;Dbxref=GenBank:WP_011883666.1;Name=WP_011883666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410513.1;locus_tag=LDO50_RS00450;product=bifunctional transcriptional regulator/glucokinase;protein_id=WP_011883666.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 52536 53753 . - . ID=gene-LDO50_RS00455;Name=LDO50_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00455;old_locus_tag=BVI1335_1010056 NZ_CAJZAO010000004.1 Protein Homology CDS 52536 53753 . - 0 ID=cds-WP_011883664.1;Parent=gene-LDO50_RS00455;Dbxref=GenBank:WP_011883664.1;Name=WP_011883664.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755083.1;locus_tag=LDO50_RS00455;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_011883664.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 54016 54468 . + . ID=gene-LDO50_RS00460;Name=LDO50_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00460;old_locus_tag=BVI1335_1010057 NZ_CAJZAO010000004.1 Protein Homology CDS 54016 54468 . + 0 ID=cds-WP_011883662.1;Parent=gene-LDO50_RS00460;Dbxref=GenBank:WP_011883662.1;Name=WP_011883662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764938.1;locus_tag=LDO50_RS00460;product=hypothetical protein;protein_id=WP_011883662.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 54692 55975 . + . ID=gene-LDO50_RS00465;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=LDO50_RS00465;old_locus_tag=BVI1335_1010059 NZ_CAJZAO010000004.1 Protein Homology CDS 54692 55975 . + 0 ID=cds-WP_014722624.1;Parent=gene-LDO50_RS00465;Dbxref=GenBank:WP_014722624.1;Name=WP_014722624.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410509.1;locus_tag=LDO50_RS00465;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_014722624.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 55990 57111 . + . ID=gene-LDO50_RS00470;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=LDO50_RS00470;old_locus_tag=BVI1335_1010058 NZ_CAJZAO010000004.1 Protein Homology CDS 55990 57111 . + 0 ID=cds-WP_011883658.1;Parent=gene-LDO50_RS00470;Dbxref=GenBank:WP_011883658.1;Name=WP_011883658.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412307.1;locus_tag=LDO50_RS00470;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_011883658.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 57132 57323 . + . ID=gene-LDO50_RS00475;Name=LDO50_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00475;old_locus_tag=BVI1335_1010060 NZ_CAJZAO010000004.1 GeneMarkS-2+ CDS 57132 57323 . + 0 ID=cds-WP_059668141.1;Parent=gene-LDO50_RS00475;Dbxref=GenBank:WP_059668141.1;Name=WP_059668141.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS00475;product=hypothetical protein;protein_id=WP_059668141.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 57496 58014 . + . ID=gene-LDO50_RS00480;Name=LDO50_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00480;old_locus_tag=BVI1335_1010061 NZ_CAJZAO010000004.1 Protein Homology CDS 57496 58014 . + 0 ID=cds-WP_034194108.1;Parent=gene-LDO50_RS00480;Dbxref=GenBank:WP_034194108.1;Name=WP_034194108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363273.1;locus_tag=LDO50_RS00480;product=DUF1993 domain-containing protein;protein_id=WP_034194108.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 58229 59371 . + . ID=gene-LDO50_RS00485;Name=ribBA;gbkey=Gene;gene=ribBA;gene_biotype=protein_coding;locus_tag=LDO50_RS00485;old_locus_tag=BVI1335_1010062 NZ_CAJZAO010000004.1 Protein Homology CDS 58229 59371 . + 0 ID=cds-WP_011883653.1;Parent=gene-LDO50_RS00485;Dbxref=GenBank:WP_011883653.1;Name=WP_011883653.1;Ontology_term=GO:0003935,GO:0008686;gbkey=CDS;gene=ribBA;go_function=GTP cyclohydrolase II activity|0003935||IEA,3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484241.1;locus_tag=LDO50_RS00485;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=WP_011883653.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 59425 59934 . + . ID=gene-LDO50_RS00490;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=LDO50_RS00490;old_locus_tag=BVI1335_1010063 NZ_CAJZAO010000004.1 Protein Homology CDS 59425 59934 . + 0 ID=cds-WP_011883652.1;Parent=gene-LDO50_RS00490;Dbxref=GenBank:WP_011883652.1;Name=WP_011883652.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186056.1;locus_tag=LDO50_RS00490;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_011883652.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 59931 60368 . + . ID=gene-LDO50_RS00495;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=LDO50_RS00495;old_locus_tag=BVI1335_1010064 NZ_CAJZAO010000004.1 Protein Homology CDS 59931 60368 . + 0 ID=cds-WP_011883649.1;Parent=gene-LDO50_RS00495;Dbxref=GenBank:WP_011883649.1;Name=WP_011883649.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185707.1;locus_tag=LDO50_RS00495;product=transcription antitermination factor NusB;protein_id=WP_011883649.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 60438 61634 . + . ID=gene-LDO50_RS00500;Name=LDO50_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00500;old_locus_tag=BVI1335_1010065 NZ_CAJZAO010000004.1 Protein Homology CDS 60438 61634 . + 0 ID=cds-WP_034194107.1;Parent=gene-LDO50_RS00500;Dbxref=GenBank:WP_034194107.1;Name=WP_034194107.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476663.1;locus_tag=LDO50_RS00500;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_034194107.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 61758 63121 . + . ID=gene-LDO50_RS00505;Name=LDO50_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00505 NZ_CAJZAO010000004.1 Protein Homology CDS 61758 62220 . + 0 ID=cds-WP_106919331.1;Parent=gene-LDO50_RS00505;Dbxref=GenBank:WP_106919331.1;Name=WP_106919331.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612104.1;locus_tag=LDO50_RS00505;product=IS3 family transposase;protein_id=WP_106919331.1;transl_table=11 NZ_CAJZAO010000004.1 Protein Homology CDS 62220 63121 . + 2 ID=cds-WP_106919331.1;Parent=gene-LDO50_RS00505;Dbxref=GenBank:WP_106919331.1;Name=WP_106919331.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612104.1;locus_tag=LDO50_RS00505;product=IS3 family transposase;protein_id=WP_106919331.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 63197 64318 . - . ID=gene-LDO50_RS00510;Name=LDO50_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00510;old_locus_tag=BVI1335_1010068 NZ_CAJZAO010000004.1 Protein Homology CDS 63197 64318 . - 0 ID=cds-WP_011883645.1;Parent=gene-LDO50_RS00510;Dbxref=GenBank:WP_011883645.1;Name=WP_011883645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400829.1;locus_tag=LDO50_RS00510;product=transglycosylase SLT domain-containing protein;protein_id=WP_011883645.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 64915 66471 . + . ID=gene-LDO50_RS00515;Name=LDO50_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00515;old_locus_tag=BVI1335_1010070 NZ_CAJZAO010000004.1 Protein Homology CDS 64915 66471 . + 0 ID=cds-WP_011883644.1;Parent=gene-LDO50_RS00515;Dbxref=GenBank:WP_011883644.1;Name=WP_011883644.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897820.1;locus_tag=LDO50_RS00515;product=UbiD family decarboxylase;protein_id=WP_011883644.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 66530 67198 . + . ID=gene-LDO50_RS00520;Name=LDO50_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00520;old_locus_tag=BVI1335_1010071 NZ_CAJZAO010000004.1 Protein Homology CDS 66530 67198 . + 0 ID=cds-WP_014722614.1;Parent=gene-LDO50_RS00520;Dbxref=GenBank:WP_014722614.1;Name=WP_014722614.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400831.1;locus_tag=LDO50_RS00520;product=LysE family translocator;protein_id=WP_014722614.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 67311 67604 . - . ID=gene-LDO50_RS00525;Name=LDO50_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00525;old_locus_tag=BVI1335_1010072 NZ_CAJZAO010000004.1 Protein Homology CDS 67311 67604 . - 0 ID=cds-WP_014722613.1;Parent=gene-LDO50_RS00525;Dbxref=GenBank:WP_014722613.1;Name=WP_014722613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488565.1;locus_tag=LDO50_RS00525;product=hypothetical protein;protein_id=WP_014722613.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 68120 69049 . + . ID=gene-LDO50_RS00530;Name=LDO50_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00530;old_locus_tag=BVI1335_1010073 NZ_CAJZAO010000004.1 Protein Homology CDS 68120 69049 . + 0 ID=cds-WP_224019298.1;Parent=gene-LDO50_RS00530;Dbxref=GenBank:WP_224019298.1;Name=WP_224019298.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496606.1;locus_tag=LDO50_RS00530;product=Rossmann-like and DUF2520 domain-containing protein;protein_id=WP_224019298.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 69126 69689 . + . ID=gene-LDO50_RS00535;Name=LDO50_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00535;old_locus_tag=BVI1335_1010074 NZ_CAJZAO010000004.1 Protein Homology CDS 69126 69689 . + 0 ID=cds-WP_014722610.1;Parent=gene-LDO50_RS00535;Dbxref=GenBank:WP_014722610.1;Name=WP_014722610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010116661.1;locus_tag=LDO50_RS00535;product=YggT family protein;protein_id=WP_014722610.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 69699 70049 . - . ID=gene-LDO50_RS00540;Name=LDO50_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00540;old_locus_tag=BVI1335_1010075 NZ_CAJZAO010000004.1 Protein Homology CDS 69699 70049 . - 0 ID=cds-WP_011883634.1;Parent=gene-LDO50_RS00540;Dbxref=GenBank:WP_011883634.1;Name=WP_011883634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883634.1;locus_tag=LDO50_RS00540;product=DUF190 domain-containing protein;protein_id=WP_011883634.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 70074 70460 . - . ID=gene-LDO50_RS00545;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=LDO50_RS00545;old_locus_tag=BVI1335_1010076 NZ_CAJZAO010000004.1 Protein Homology CDS 70074 70460 . - 0 ID=cds-WP_045579506.1;Parent=gene-LDO50_RS00545;Dbxref=GenBank:WP_045579506.1;Name=WP_045579506.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522284.1;locus_tag=LDO50_RS00545;product=fluoride efflux transporter CrcB;protein_id=WP_045579506.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 70836 72047 . + . ID=gene-LDO50_RS00550;Name=LDO50_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00550;old_locus_tag=BVI1335_1010077 NZ_CAJZAO010000004.1 Protein Homology CDS 70836 72047 . + 0 ID=cds-WP_224019300.1;Parent=gene-LDO50_RS00550;Dbxref=GenBank:WP_224019300.1;Name=WP_224019300.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476671.1;locus_tag=LDO50_RS00550;product=S53 family peptidase;protein_id=WP_224019300.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 72082 72948 . - . ID=gene-LDO50_RS00555;Name=LDO50_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00555;old_locus_tag=BVI1335_1010078 NZ_CAJZAO010000004.1 Protein Homology CDS 72082 72948 . - 0 ID=cds-WP_034194104.1;Parent=gene-LDO50_RS00555;Dbxref=GenBank:WP_034194104.1;Name=WP_034194104.1;Ontology_term=GO:0008270,GO:0017136,GO:0046872,GO:0070403;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,histone deacetylase activity%2C NAD-dependent|0017136||IEA,metal ion binding|0046872||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351224.1;locus_tag=LDO50_RS00555;product=SIR2 family NAD-dependent protein deacylase;protein_id=WP_034194104.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 73140 73520 . - . ID=gene-LDO50_RS00560;Name=LDO50_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00560;old_locus_tag=BVI1335_1010079 NZ_CAJZAO010000004.1 Protein Homology CDS 73140 73520 . - 0 ID=cds-WP_011883627.1;Parent=gene-LDO50_RS00560;Dbxref=GenBank:WP_011883627.1;Name=WP_011883627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722606.1;locus_tag=LDO50_RS00560;product=NUDIX hydrolase;protein_id=WP_011883627.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 73517 74116 . - . ID=gene-LDO50_RS00565;Name=LDO50_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00565;old_locus_tag=BVI1335_1010080 NZ_CAJZAO010000004.1 Protein Homology CDS 73517 74116 . - 0 ID=cds-WP_011883625.1;Parent=gene-LDO50_RS00565;Dbxref=GenBank:WP_011883625.1;Name=WP_011883625.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883625.1;locus_tag=LDO50_RS00565;product=NUDIX domain-containing protein;protein_id=WP_011883625.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 74198 74953 . + . ID=gene-LDO50_RS00570;Name=LDO50_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00570;old_locus_tag=BVI1335_1010081 NZ_CAJZAO010000004.1 Protein Homology CDS 74198 74953 . + 0 ID=cds-WP_045579508.1;Parent=gene-LDO50_RS00570;Dbxref=GenBank:WP_045579508.1;Name=WP_045579508.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897830.1;locus_tag=LDO50_RS00570;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_045579508.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 75059 75658 . + . ID=gene-LDO50_RS00575;Name=LDO50_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00575;old_locus_tag=BVI1335_1010082 NZ_CAJZAO010000004.1 Protein Homology CDS 75059 75658 . + 0 ID=cds-WP_011883621.1;Parent=gene-LDO50_RS00575;Dbxref=GenBank:WP_011883621.1;Name=WP_011883621.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883621.1;locus_tag=LDO50_RS00575;product=chromate transporter;protein_id=WP_011883621.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 75655 76191 . + . ID=gene-LDO50_RS00580;Name=LDO50_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00580;old_locus_tag=BVI1335_1010083 NZ_CAJZAO010000004.1 Protein Homology CDS 75655 76191 . + 0 ID=cds-WP_014722602.1;Parent=gene-LDO50_RS00580;Dbxref=GenBank:WP_014722602.1;Name=WP_014722602.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722602.1;locus_tag=LDO50_RS00580;product=chromate transporter;protein_id=WP_014722602.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 76530 76805 . + . ID=gene-LDO50_RS00585;Name=LDO50_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00585;old_locus_tag=BVI1335_1010085 NZ_CAJZAO010000004.1 Protein Homology CDS 76530 76805 . + 0 ID=cds-WP_014722601.1;Parent=gene-LDO50_RS00585;Dbxref=GenBank:WP_014722601.1;Name=WP_014722601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722601.1;locus_tag=LDO50_RS00585;product=hypothetical protein;protein_id=WP_014722601.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 76873 77082 . + . ID=gene-LDO50_RS00590;Name=LDO50_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00590;old_locus_tag=BVI1335_1010086 NZ_CAJZAO010000004.1 Protein Homology CDS 76873 77082 . + 0 ID=cds-WP_011883615.1;Parent=gene-LDO50_RS00590;Dbxref=GenBank:WP_011883615.1;Name=WP_011883615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336971.1;locus_tag=LDO50_RS00590;product=hypothetical protein;protein_id=WP_011883615.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 77116 77328 . + . ID=gene-LDO50_RS00595;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=LDO50_RS00595 NZ_CAJZAO010000004.1 Protein Homology CDS 77116 77328 . + 0 ID=cds-WP_011883613.1;Parent=gene-LDO50_RS00595;Dbxref=GenBank:WP_011883613.1;Name=WP_011883613.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202502.1;locus_tag=LDO50_RS00595;product=30S ribosomal protein S21;protein_id=WP_011883613.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 77339 77542 . + . ID=gene-LDO50_RS00600;Name=LDO50_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00600;old_locus_tag=BVI1335_1010088 NZ_CAJZAO010000004.1 Protein Homology CDS 77339 77542 . + 0 ID=cds-WP_014722600.1;Parent=gene-LDO50_RS00600;Dbxref=GenBank:WP_014722600.1;Name=WP_014722600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722600.1;locus_tag=LDO50_RS00600;product=hypothetical protein;protein_id=WP_014722600.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 77611 77955 . - . ID=gene-LDO50_RS00605;Name=LDO50_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00605;old_locus_tag=BVI1335_1010089 NZ_CAJZAO010000004.1 Protein Homology CDS 77611 77955 . - 0 ID=cds-WP_011883612.1;Parent=gene-LDO50_RS00605;Dbxref=GenBank:WP_011883612.1;Name=WP_011883612.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003258412.1;locus_tag=LDO50_RS00605;product=cupin domain-containing protein;protein_id=WP_011883612.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 78275 79354 . - . ID=gene-LDO50_RS00610;Name=LDO50_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00610;old_locus_tag=BVI1335_1010090 NZ_CAJZAO010000004.1 Protein Homology CDS 78275 79354 . - 0 ID=cds-WP_224019301.1;Parent=gene-LDO50_RS00610;Dbxref=GenBank:WP_224019301.1;Name=WP_224019301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883611.1;locus_tag=LDO50_RS00610;product=Imm72 family immunity protein;protein_id=WP_224019301.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 79491 80564 . - . ID=gene-LDO50_RS00615;Name=LDO50_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00615;old_locus_tag=BVI1335_1010091 NZ_CAJZAO010000004.1 Protein Homology CDS 79491 80564 . - 0 ID=cds-WP_224019303.1;Parent=gene-LDO50_RS00615;Dbxref=GenBank:WP_224019303.1;Name=WP_224019303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883609.1;locus_tag=LDO50_RS00615;product=Imm71 family immunity protein;protein_id=WP_224019303.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 80835 80909 . + . ID=gene-LDO50_RS00620;Name=LDO50_RS00620;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS00620;old_locus_tag=BVI1335_TRNA10 NZ_CAJZAO010000004.1 tRNAscan-SE tRNA 80835 80909 . + . ID=rna-LDO50_RS00620;Parent=gene-LDO50_RS00620;anticodon=(pos:80868..80870);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS00620;product=tRNA-Gly NZ_CAJZAO010000004.1 tRNAscan-SE exon 80835 80909 . + . ID=exon-LDO50_RS00620-1;Parent=rna-LDO50_RS00620;anticodon=(pos:80868..80870);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS00620;product=tRNA-Gly NZ_CAJZAO010000004.1 RefSeq gene 81042 81809 . + . ID=gene-LDO50_RS00625;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=LDO50_RS00625;old_locus_tag=BVI1335_1010092 NZ_CAJZAO010000004.1 Protein Homology CDS 81042 81809 . + 0 ID=cds-WP_176044473.1;Parent=gene-LDO50_RS00625;Dbxref=GenBank:WP_176044473.1;Name=WP_176044473.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883607.1;locus_tag=LDO50_RS00625;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_176044473.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 81900 82730 . - . ID=gene-LDO50_RS00630;Name=LDO50_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00630;old_locus_tag=BVI1335_1010093 NZ_CAJZAO010000004.1 Protein Homology CDS 81900 82730 . - 0 ID=cds-WP_060093257.1;Parent=gene-LDO50_RS00630;Dbxref=GenBank:WP_060093257.1;Name=WP_060093257.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488560.1;locus_tag=LDO50_RS00630;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_060093257.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 82809 83390 . - . ID=gene-LDO50_RS00635;Name=LDO50_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00635;old_locus_tag=BVI1335_1010094 NZ_CAJZAO010000004.1 Protein Homology CDS 82809 83390 . - 0 ID=cds-WP_060093255.1;Parent=gene-LDO50_RS00635;Dbxref=GenBank:WP_060093255.1;Name=WP_060093255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400908.1;locus_tag=LDO50_RS00635;product=DUF1439 domain-containing protein;protein_id=WP_060093255.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 83540 83869 . - . ID=gene-LDO50_RS00640;Name=LDO50_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00640 NZ_CAJZAO010000004.1 Protein Homology CDS 83540 83869 . - 0 ID=cds-WP_011883601.1;Parent=gene-LDO50_RS00640;Dbxref=GenBank:WP_011883601.1;Name=WP_011883601.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722593.1;locus_tag=LDO50_RS00640;product=YkgJ family cysteine cluster protein;protein_id=WP_011883601.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 84029 85420 . + . ID=gene-LDO50_RS00645;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=LDO50_RS00645;old_locus_tag=BVI1335_1010096 NZ_CAJZAO010000004.1 Protein Homology CDS 84029 85420 . + 0 ID=cds-WP_014722592.1;Parent=gene-LDO50_RS00645;Dbxref=GenBank:WP_014722592.1;Name=WP_014722592.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363257.1;locus_tag=LDO50_RS00645;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_014722592.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 85492 85749 . + . ID=gene-LDO50_RS00650;Name=LDO50_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00650;old_locus_tag=BVI1335_1010097 NZ_CAJZAO010000004.1 Protein Homology CDS 85492 85749 . + 0 ID=cds-WP_011883598.1;Parent=gene-LDO50_RS00650;Dbxref=GenBank:WP_011883598.1;Name=WP_011883598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883598.1;locus_tag=LDO50_RS00650;product=hypothetical protein;protein_id=WP_011883598.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 85854 86510 . + . ID=gene-LDO50_RS00655;Name=LDO50_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00655;old_locus_tag=BVI1335_1010098 NZ_CAJZAO010000004.1 Protein Homology CDS 85854 86510 . + 0 ID=cds-WP_014722591.1;Parent=gene-LDO50_RS00655;Dbxref=GenBank:WP_014722591.1;Name=WP_014722591.1;Ontology_term=GO:0030091,GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein repair|0030091||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332930.1;locus_tag=LDO50_RS00655;product=protein-L-isoaspartate O-methyltransferase family protein;protein_id=WP_014722591.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 86525 86848 . + . ID=gene-LDO50_RS00660;Name=LDO50_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00660;old_locus_tag=BVI1335_1010099 NZ_CAJZAO010000004.1 Protein Homology CDS 86525 86848 . + 0 ID=cds-WP_014722590.1;Parent=gene-LDO50_RS00660;Dbxref=GenBank:WP_014722590.1;Name=WP_014722590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091617.1;locus_tag=LDO50_RS00660;product=rhodanese-like domain-containing protein;protein_id=WP_014722590.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 87240 88547 . + . ID=gene-LDO50_RS00665;Name=urtA;gbkey=Gene;gene=urtA;gene_biotype=protein_coding;locus_tag=LDO50_RS00665;old_locus_tag=BVI1335_1010100 NZ_CAJZAO010000004.1 Protein Homology CDS 87240 88547 . + 0 ID=cds-WP_011883592.1;Parent=gene-LDO50_RS00665;Dbxref=GenBank:WP_011883592.1;Name=WP_011883592.1;Ontology_term=GO:0015840,GO:0033219,GO:0033221,GO:0030288,GO:0055052;gbkey=CDS;gene=urtA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=urea binding|0033219||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476693.1;locus_tag=LDO50_RS00665;product=urea ABC transporter substrate-binding protein;protein_id=WP_011883592.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 88717 90336 . + . ID=gene-LDO50_RS00670;Name=urtB;gbkey=Gene;gene=urtB;gene_biotype=protein_coding;locus_tag=LDO50_RS00670;old_locus_tag=BVI1335_1010101 NZ_CAJZAO010000004.1 Protein Homology CDS 88717 90336 . + 0 ID=cds-WP_175995255.1;Parent=gene-LDO50_RS00670;Dbxref=GenBank:WP_175995255.1;Name=WP_175995255.1;Ontology_term=GO:0015840,GO:0033221,GO:0005886,GO:0055052;gbkey=CDS;gene=urtB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488541.1;locus_tag=LDO50_RS00670;product=urea ABC transporter permease subunit UrtB;protein_id=WP_175995255.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 90421 91435 . + . ID=gene-LDO50_RS00675;Name=urtC;gbkey=Gene;gene=urtC;gene_biotype=protein_coding;locus_tag=LDO50_RS00675;old_locus_tag=BVI1335_1010103;partial=true;start_range=.,90421 NZ_CAJZAO010000004.1 Protein Homology CDS 90421 91435 . + 1 ID=cds-WP_443797694.1;Parent=gene-LDO50_RS00675;Dbxref=GenBank:WP_443797694.1;Name=WP_443797694.1;Ontology_term=GO:0015840,GO:0033221,GO:0005886,GO:0055052;gbkey=CDS;gene=urtC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656160.1;locus_tag=LDO50_RS00675;partial=true;product=urea ABC transporter permease subunit UrtC;protein_id=WP_443797694.1;start_range=.,90421;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 91432 92289 . + . ID=gene-LDO50_RS00680;Name=urtD;gbkey=Gene;gene=urtD;gene_biotype=protein_coding;locus_tag=LDO50_RS00680;old_locus_tag=BVI1335_1010104 NZ_CAJZAO010000004.1 Protein Homology CDS 91432 92289 . + 0 ID=cds-WP_011883587.1;Parent=gene-LDO50_RS00680;Dbxref=GenBank:WP_011883587.1;Name=WP_011883587.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtD;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406305.1;locus_tag=LDO50_RS00680;product=urea ABC transporter ATP-binding protein UrtD;protein_id=WP_011883587.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 92294 92986 . + . ID=gene-LDO50_RS00685;Name=urtE;gbkey=Gene;gene=urtE;gene_biotype=protein_coding;locus_tag=LDO50_RS00685;old_locus_tag=BVI1335_1010105 NZ_CAJZAO010000004.1 Protein Homology CDS 92294 92986 . + 0 ID=cds-WP_011883585.1;Parent=gene-LDO50_RS00685;Dbxref=GenBank:WP_011883585.1;Name=WP_011883585.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtE;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332923.1;locus_tag=LDO50_RS00685;product=urea ABC transporter ATP-binding subunit UrtE;protein_id=WP_011883585.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 93096 93971 . + . ID=gene-LDO50_RS00690;Name=LDO50_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00690;old_locus_tag=BVI1335_1010106 NZ_CAJZAO010000004.1 Protein Homology CDS 93096 93971 . + 0 ID=cds-WP_059566939.1;Parent=gene-LDO50_RS00690;Dbxref=GenBank:WP_059566939.1;Name=WP_059566939.1;Ontology_term=GO:0008152,GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758742.1;locus_tag=LDO50_RS00690;product=urease accessory protein UreD;protein_id=WP_059566939.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 94205 94507 . + . ID=gene-LDO50_RS00695;Name=ureA;gbkey=Gene;gene=ureA;gene_biotype=protein_coding;locus_tag=LDO50_RS00695;old_locus_tag=BVI1335_1010109 NZ_CAJZAO010000004.1 Protein Homology CDS 94205 94507 . + 0 ID=cds-WP_006406310.1;Parent=gene-LDO50_RS00695;Dbxref=GenBank:WP_006406310.1;Name=WP_006406310.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureA;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008923043.1;locus_tag=LDO50_RS00695;product=urease subunit gamma;protein_id=WP_006406310.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 94522 94827 . + . ID=gene-LDO50_RS00700;Name=LDO50_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00700;old_locus_tag=BVI1335_1010108 NZ_CAJZAO010000004.1 Protein Homology CDS 94522 94827 . + 0 ID=cds-WP_011883582.1;Parent=gene-LDO50_RS00700;Dbxref=GenBank:WP_011883582.1;Name=WP_011883582.1;Ontology_term=GO:0043419,GO:0035550;gbkey=CDS;go_component=urease complex|0035550||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332918.1;locus_tag=LDO50_RS00700;product=urease subunit beta;protein_id=WP_011883582.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 94856 96562 . + . ID=gene-LDO50_RS00705;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=LDO50_RS00705;old_locus_tag=BVI1335_1010110 NZ_CAJZAO010000004.1 Protein Homology CDS 94856 96562 . + 0 ID=cds-WP_014722585.1;Parent=gene-LDO50_RS00705;Dbxref=GenBank:WP_014722585.1;Name=WP_014722585.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758739.1;locus_tag=LDO50_RS00705;product=urease subunit alpha;protein_id=WP_014722585.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 96580 97188 . + . ID=gene-LDO50_RS00710;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=LDO50_RS00710;old_locus_tag=BVI1335_1010111 NZ_CAJZAO010000004.1 Protein Homology CDS 96580 97188 . + 0 ID=cds-WP_014722584.1;Parent=gene-LDO50_RS00710;Dbxref=GenBank:WP_014722584.1;Name=WP_014722584.1;Ontology_term=GO:0019627,GO:0016151;gbkey=CDS;gene=ureE;go_function=nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752111.1;locus_tag=LDO50_RS00710;product=urease accessory protein UreE;protein_id=WP_014722584.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 97175 97855 . + . ID=gene-LDO50_RS00715;Name=LDO50_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00715;old_locus_tag=BVI1335_1010112 NZ_CAJZAO010000004.1 Protein Homology CDS 97175 97855 . + 0 ID=cds-WP_011883576.1;Parent=gene-LDO50_RS00715;Dbxref=GenBank:WP_011883576.1;Name=WP_011883576.1;Ontology_term=GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601275.1;locus_tag=LDO50_RS00715;product=urease accessory protein UreF;protein_id=WP_011883576.1;transl_table=11 NZ_CAJZAO010000004.1 RefSeq gene 97872 98519 . + . ID=gene-LDO50_RS00720;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=LDO50_RS00720;old_locus_tag=BVI1335_1010113 NZ_CAJZAO010000004.1 Protein Homology CDS 97872 98519 . + 0 ID=cds-WP_014722583.1;Parent=gene-LDO50_RS00720;Dbxref=GenBank:WP_014722583.1;Name=WP_014722583.1;Ontology_term=GO:0019627,GO:0003924,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=GTPase activity|0003924||IEA,metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656154.1;locus_tag=LDO50_RS00720;product=urease accessory protein UreG;protein_id=WP_014722583.1;transl_table=11 ##sequence-region NZ_CAJZAO010000005.1 1 37107 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000005.1 RefSeq region 1 37107 . + . ID=NZ_CAJZAO010000005.1:1..37107;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_102 NZ_CAJZAO010000005.1 RefSeq gene 1 1217 . - . ID=gene-LDO50_RS00725;Name=LDO50_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00725;partial=true;start_range=.,1 NZ_CAJZAO010000005.1 Protein Homology CDS 1 1217 . - 0 ID=cds-WP_224019307.1;Parent=gene-LDO50_RS00725;Dbxref=GenBank:WP_224019307.1;Name=WP_224019307.1;Ontology_term=GO:0009306,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752230.1;locus_tag=LDO50_RS00725;partial=true;product=GspE/PulE family protein;protein_id=WP_224019307.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 1300 2586 . - . ID=gene-LDO50_RS00730;Name=LDO50_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00730;old_locus_tag=BVI1335_1020002 NZ_CAJZAO010000005.1 Protein Homology CDS 1300 2586 . - 0 ID=cds-WP_011883195.1;Parent=gene-LDO50_RS00730;Dbxref=GenBank:WP_011883195.1;Name=WP_011883195.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883195.1;locus_tag=LDO50_RS00730;product=HlyC/CorC family transporter;protein_id=WP_011883195.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 2941 4386 . - . ID=gene-LDO50_RS00735;Name=LDO50_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00735;old_locus_tag=BVI1335_1020004 NZ_CAJZAO010000005.1 Protein Homology CDS 2941 4386 . - 0 ID=cds-WP_014722403.1;Parent=gene-LDO50_RS00735;Dbxref=GenBank:WP_014722403.1;Name=WP_014722403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883196.1;locus_tag=LDO50_RS00735;product=GSCFA domain-containing protein;protein_id=WP_014722403.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 4845 4921 . - . ID=gene-LDO50_RS00740;Name=LDO50_RS00740;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS00740;old_locus_tag=BVI1335_TRNA29 NZ_CAJZAO010000005.1 tRNAscan-SE tRNA 4845 4921 . - . ID=rna-LDO50_RS00740;Parent=gene-LDO50_RS00740;anticodon=(pos:complement(4885..4887));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS00740;product=tRNA-Pro NZ_CAJZAO010000005.1 tRNAscan-SE exon 4845 4921 . - . ID=exon-LDO50_RS00740-1;Parent=rna-LDO50_RS00740;anticodon=(pos:complement(4885..4887));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS00740;product=tRNA-Pro NZ_CAJZAO010000005.1 RefSeq gene 5073 6068 . - . ID=gene-LDO50_RS00745;Name=LDO50_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00745;old_locus_tag=BVI1335_1020006 NZ_CAJZAO010000005.1 Protein Homology CDS 5073 6068 . - 0 ID=cds-WP_034194180.1;Parent=gene-LDO50_RS00745;Dbxref=GenBank:WP_034194180.1;Name=WP_034194180.1;Ontology_term=GO:0008299;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091260.1;locus_tag=LDO50_RS00745;product=polyprenyl synthetase family protein;protein_id=WP_034194180.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 6279 6590 . + . ID=gene-LDO50_RS00750;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=LDO50_RS00750;old_locus_tag=BVI1335_1020007 NZ_CAJZAO010000005.1 Protein Homology CDS 6279 6590 . + 0 ID=cds-WP_006025184.1;Parent=gene-LDO50_RS00750;Dbxref=GenBank:WP_006025184.1;Name=WP_006025184.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011902040.1;locus_tag=LDO50_RS00750;product=50S ribosomal protein L21;protein_id=WP_006025184.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 6615 6878 . + . ID=gene-LDO50_RS00755;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=LDO50_RS00755;old_locus_tag=BVI1335_1020008 NZ_CAJZAO010000005.1 Protein Homology CDS 6615 6878 . + 0 ID=cds-WP_006476999.1;Parent=gene-LDO50_RS00755;Dbxref=GenBank:WP_006476999.1;Name=WP_006476999.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194025.1;locus_tag=LDO50_RS00755;product=50S ribosomal protein L27;protein_id=WP_006476999.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 7064 8176 . + . ID=gene-LDO50_RS00760;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=LDO50_RS00760;old_locus_tag=BVI1335_1020009 NZ_CAJZAO010000005.1 Protein Homology CDS 7064 8176 . + 0 ID=cds-WP_011883198.1;Parent=gene-LDO50_RS00760;Dbxref=GenBank:WP_011883198.1;Name=WP_011883198.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400418.1;locus_tag=LDO50_RS00760;product=Obg family GTPase CgtA;protein_id=WP_011883198.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 8266 9384 . + . ID=gene-LDO50_RS00765;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=LDO50_RS00765;old_locus_tag=BVI1335_1020010 NZ_CAJZAO010000005.1 Protein Homology CDS 8266 9384 . + 0 ID=cds-WP_011883199.1;Parent=gene-LDO50_RS00765;Dbxref=GenBank:WP_011883199.1;Name=WP_011883199.1;Ontology_term=GO:0055129,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013340556.1;locus_tag=LDO50_RS00765;product=glutamate 5-kinase;protein_id=WP_011883199.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 9487 10095 . - . ID=gene-LDO50_RS00770;Name=LDO50_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00770;old_locus_tag=BVI1335_1020011 NZ_CAJZAO010000005.1 Protein Homology CDS 9487 10095 . - 0 ID=cds-WP_011883200.1;Parent=gene-LDO50_RS00770;Dbxref=GenBank:WP_011883200.1;Name=WP_011883200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400416.1;locus_tag=LDO50_RS00770;product=CNP1-like family protein;protein_id=WP_011883200.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 10109 10756 . - . ID=gene-LDO50_RS00775;Name=LDO50_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00775;old_locus_tag=BVI1335_1020012 NZ_CAJZAO010000005.1 Protein Homology CDS 10109 10756 . - 0 ID=cds-WP_011883201.1;Parent=gene-LDO50_RS00775;Dbxref=GenBank:WP_011883201.1;Name=WP_011883201.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350862.1;locus_tag=LDO50_RS00775;product=RNA pyrophosphohydrolase;protein_id=WP_011883201.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 10973 12709 . + . ID=gene-LDO50_RS00780;Name=LDO50_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00780;old_locus_tag=BVI1335_1020013 NZ_CAJZAO010000005.1 Protein Homology CDS 10973 12709 . + 0 ID=cds-WP_011883202.1;Parent=gene-LDO50_RS00780;Dbxref=GenBank:WP_011883202.1;Name=WP_011883202.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA deacylase activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400413.1;locus_tag=LDO50_RS00780;product=proline--tRNA ligase;protein_id=WP_011883202.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 12731 13333 . + . ID=gene-LDO50_RS00785;Name=LDO50_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00785;old_locus_tag=BVI1335_1020014 NZ_CAJZAO010000005.1 Protein Homology CDS 12731 13333 . + 0 ID=cds-WP_011883203.1;Parent=gene-LDO50_RS00785;Dbxref=GenBank:WP_011883203.1;Name=WP_011883203.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194061.1;locus_tag=LDO50_RS00785;product=MarC family protein;protein_id=WP_011883203.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 13411 13962 . - . ID=gene-LDO50_RS00790;Name=LDO50_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00790;old_locus_tag=BVI1335_1020015 NZ_CAJZAO010000005.1 Protein Homology CDS 13411 13962 . - 0 ID=cds-WP_011883204.1;Parent=gene-LDO50_RS00790;Dbxref=GenBank:WP_011883204.1;Name=WP_011883204.1;Ontology_term=GO:0009116;gbkey=CDS;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025192.1;locus_tag=LDO50_RS00790;product=hypoxanthine-guanine phosphoribosyltransferase;protein_id=WP_011883204.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 14060 15427 . - . ID=gene-LDO50_RS00795;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=LDO50_RS00795;old_locus_tag=BVI1335_1020016 NZ_CAJZAO010000005.1 Protein Homology CDS 14060 15427 . - 0 ID=cds-WP_011883205.1;Parent=gene-LDO50_RS00795;Dbxref=GenBank:WP_011883205.1;Name=WP_011883205.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194338.1;locus_tag=LDO50_RS00795;product=signal recognition particle protein;protein_id=WP_011883205.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 15518 16411 . + . ID=gene-LDO50_RS00800;Name=LDO50_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00800;old_locus_tag=BVI1335_1020017 NZ_CAJZAO010000005.1 Protein Homology CDS 15518 16411 . + 0 ID=cds-WP_224019308.1;Parent=gene-LDO50_RS00800;Dbxref=GenBank:WP_224019308.1;Name=WP_224019308.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538773.1;locus_tag=LDO50_RS00800;product=cytochrome C assembly family protein;protein_id=WP_224019308.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 16425 16721 . + . ID=gene-LDO50_RS00805;Name=LDO50_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00805;old_locus_tag=BVI1335_1020018 NZ_CAJZAO010000005.1 Protein Homology CDS 16425 16721 . + 0 ID=cds-WP_011883207.1;Parent=gene-LDO50_RS00805;Dbxref=GenBank:WP_011883207.1;Name=WP_011883207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491491.1;locus_tag=LDO50_RS00805;product=PP0621 family protein;protein_id=WP_011883207.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 16732 17322 . + . ID=gene-LDO50_RS00810;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=LDO50_RS00810;old_locus_tag=BVI1335_1020019 NZ_CAJZAO010000005.1 Protein Homology CDS 16732 17322 . + 0 ID=cds-WP_212172479.1;Parent=gene-LDO50_RS00810;Dbxref=GenBank:WP_212172479.1;Name=WP_212172479.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025196.1;locus_tag=LDO50_RS00810;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_212172479.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 17786 20776 . + . ID=gene-LDO50_RS00815;Name=LDO50_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00815;old_locus_tag=BVI1335_1020021 NZ_CAJZAO010000005.1 Protein Homology CDS 17786 20776 . + 0 ID=cds-WP_011883209.1;Parent=gene-LDO50_RS00815;Dbxref=GenBank:WP_011883209.1;Name=WP_011883209.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544523.1;locus_tag=LDO50_RS00815;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_011883209.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 21139 22350 . + . ID=gene-LDO50_RS00820;Name=LDO50_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00820;old_locus_tag=BVI1335_1020022 NZ_CAJZAO010000005.1 Protein Homology CDS 21139 22350 . + 0 ID=cds-WP_011883210.1;Parent=gene-LDO50_RS00820;Dbxref=GenBank:WP_011883210.1;Name=WP_011883210.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194129.1;locus_tag=LDO50_RS00820;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_011883210.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 22433 22759 . + . ID=gene-LDO50_RS00825;Name=LDO50_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00825;old_locus_tag=BVI1335_1020023 NZ_CAJZAO010000005.1 Protein Homology CDS 22433 22759 . + 0 ID=cds-WP_081056201.1;Parent=gene-LDO50_RS00825;Dbxref=GenBank:WP_081056201.1;Name=WP_081056201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091277.1;locus_tag=LDO50_RS00825;product=hypothetical protein;protein_id=WP_081056201.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 22788 23489 . + . ID=gene-LDO50_RS00830;Name=LDO50_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00830;old_locus_tag=BVI1335_1020024 NZ_CAJZAO010000005.1 Protein Homology CDS 22788 23489 . + 0 ID=cds-WP_011883212.1;Parent=gene-LDO50_RS00830;Dbxref=GenBank:WP_011883212.1;Name=WP_011883212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655917.1;locus_tag=LDO50_RS00830;product=histone H1-like DNA-binding protein;protein_id=WP_011883212.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 23707 24180 . - . ID=gene-LDO50_RS00835;Name=LDO50_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00835;old_locus_tag=BVI1335_1020025 NZ_CAJZAO010000005.1 Protein Homology CDS 23707 24180 . - 0 ID=cds-WP_011883213.1;Parent=gene-LDO50_RS00835;Dbxref=GenBank:WP_011883213.1;Name=WP_011883213.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601283.1;locus_tag=LDO50_RS00835;product=glycine zipper 2TM domain-containing protein;protein_id=WP_011883213.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 24200 25138 . - . ID=gene-LDO50_RS00840;Name=LDO50_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00840;old_locus_tag=BVI1335_1020026 NZ_CAJZAO010000005.1 Protein Homology CDS 24200 25138 . - 0 ID=cds-WP_011883214.1;Parent=gene-LDO50_RS00840;Dbxref=GenBank:WP_011883214.1;Name=WP_011883214.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602176.1;locus_tag=LDO50_RS00840;product=carbohydrate kinase family protein;protein_id=WP_011883214.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 25233 25736 . - . ID=gene-LDO50_RS00845;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=LDO50_RS00845;old_locus_tag=BVI1335_1020027 NZ_CAJZAO010000005.1 Protein Homology CDS 25233 25736 . - 0 ID=cds-WP_045579408.1;Parent=gene-LDO50_RS00845;Dbxref=GenBank:WP_045579408.1;Name=WP_045579408.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765230.1;locus_tag=LDO50_RS00845;product=thiol peroxidase;protein_id=WP_045579408.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 25808 27574 . - . ID=gene-LDO50_RS00850;Name=LDO50_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00850;old_locus_tag=BVI1335_1020028 NZ_CAJZAO010000005.1 Protein Homology CDS 25808 27574 . - 0 ID=cds-WP_224019309.1;Parent=gene-LDO50_RS00850;Dbxref=GenBank:WP_224019309.1;Name=WP_224019309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722415.1;locus_tag=LDO50_RS00850;product=DUF3426 domain-containing protein;protein_id=WP_224019309.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 27620 28522 . - . ID=gene-LDO50_RS00855;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=LDO50_RS00855;old_locus_tag=BVI1335_1020029 NZ_CAJZAO010000005.1 Protein Homology CDS 27620 28522 . - 0 ID=cds-WP_011883217.1;Parent=gene-LDO50_RS00855;Dbxref=GenBank:WP_011883217.1;Name=WP_011883217.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490720.1;locus_tag=LDO50_RS00855;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_011883217.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 28525 29892 . - . ID=gene-LDO50_RS00860;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=LDO50_RS00860;old_locus_tag=BVI1335_1020030 NZ_CAJZAO010000005.1 Protein Homology CDS 28525 29892 . - 0 ID=cds-WP_011883218.1;Parent=gene-LDO50_RS00860;Dbxref=GenBank:WP_011883218.1;Name=WP_011883218.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017777083.1;locus_tag=LDO50_RS00860;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_011883218.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 29977 30450 . - . ID=gene-LDO50_RS00865;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=LDO50_RS00865;old_locus_tag=BVI1335_1020031 NZ_CAJZAO010000005.1 Protein Homology CDS 29977 30450 . - 0 ID=cds-WP_011883219.1;Parent=gene-LDO50_RS00865;Dbxref=GenBank:WP_011883219.1;Name=WP_011883219.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009888964.1;locus_tag=LDO50_RS00865;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_011883219.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 30515 30967 . - . ID=gene-LDO50_RS00870;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=LDO50_RS00870;old_locus_tag=BVI1335_1020032 NZ_CAJZAO010000005.1 Protein Homology CDS 30515 30967 . - 0 ID=cds-WP_034194178.1;Parent=gene-LDO50_RS00870;Dbxref=GenBank:WP_034194178.1;Name=WP_034194178.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756005.1;locus_tag=LDO50_RS00870;product=type II 3-dehydroquinate dehydratase;protein_id=WP_034194178.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 31162 31743 . - . ID=gene-LDO50_RS00875;Name=LDO50_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00875;old_locus_tag=BVI1335_1020033 NZ_CAJZAO010000005.1 Protein Homology CDS 31162 31743 . - 0 ID=cds-WP_224019310.1;Parent=gene-LDO50_RS00875;Dbxref=GenBank:WP_224019310.1;Name=WP_224019310.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496749.1;locus_tag=LDO50_RS00875;product=TlpA family protein disulfide reductase;protein_id=WP_224019310.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 31751 32395 . - . ID=gene-LDO50_RS00880;Name=LDO50_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00880;old_locus_tag=BVI1335_1020035 NZ_CAJZAO010000005.1 Protein Homology CDS 31751 32395 . - 0 ID=cds-WP_014722418.1;Parent=gene-LDO50_RS00880;Dbxref=GenBank:WP_014722418.1;Name=WP_014722418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214153.1;locus_tag=LDO50_RS00880;product=UDP-N-acetylmuramate--alanine ligase;protein_id=WP_014722418.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 32618 34003 . + . ID=gene-LDO50_RS00885;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=LDO50_RS00885;old_locus_tag=BVI1335_1020034 NZ_CAJZAO010000005.1 Protein Homology CDS 32618 34003 . + 0 ID=cds-WP_034194176.1;Parent=gene-LDO50_RS00885;Dbxref=GenBank:WP_034194176.1;Name=WP_034194176.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655924.1;locus_tag=LDO50_RS00885;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_034194176.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 34000 34569 . + . ID=gene-LDO50_RS00890;Name=LDO50_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00890;old_locus_tag=BVI1335_1020036 NZ_CAJZAO010000005.1 Protein Homology CDS 34000 34569 . + 0 ID=cds-WP_045578541.1;Parent=gene-LDO50_RS00890;Dbxref=GenBank:WP_045578541.1;Name=WP_045578541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350884.1;locus_tag=LDO50_RS00890;product=YqiA/YcfP family alpha/beta fold hydrolase;protein_id=WP_045578541.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq gene 34651 36759 . + . ID=gene-LDO50_RS00895;Name=LDO50_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00895;old_locus_tag=BVI1335_1020037 NZ_CAJZAO010000005.1 Protein Homology CDS 34651 36759 . + 0 ID=cds-WP_059735994.1;Parent=gene-LDO50_RS00895;Dbxref=GenBank:WP_059735994.1;Name=WP_059735994.1;Ontology_term=GO:0003723,GO:0004540;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363053.1;locus_tag=LDO50_RS00895;product=RNB domain-containing ribonuclease;protein_id=WP_059735994.1;transl_table=11 NZ_CAJZAO010000005.1 RefSeq pseudogene 36756 37107 . + . ID=gene-LDO50_RS00900;Name=aroE;end_range=37107,.;gbkey=Gene;gene=aroE;gene_biotype=pseudogene;locus_tag=LDO50_RS00900;partial=true;pseudo=true NZ_CAJZAO010000005.1 Protein Homology CDS 36756 37107 . + 0 ID=cds-LDO50_RS00900;Parent=gene-LDO50_RS00900;Note=AroE%3B catalyzes the conversion of shikimate to 3-dehydroshikimate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=37107,.;gbkey=CDS;gene=aroE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214150.1;locus_tag=LDO50_RS00900;partial=true;product=shikimate dehydrogenase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000006.1 1 63758 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000006.1 RefSeq region 1 63758 . + . ID=NZ_CAJZAO010000006.1:1..63758;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_103 NZ_CAJZAO010000006.1 RefSeq gene 851 1933 . - . ID=gene-LDO50_RS00905;Name=LDO50_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00905;old_locus_tag=BVI1335_1030003 NZ_CAJZAO010000006.1 Protein Homology CDS 851 1933 . - 0 ID=cds-WP_060091853.1;Parent=gene-LDO50_RS00905;Dbxref=GenBank:WP_060091853.1;Name=WP_060091853.1;Ontology_term=GO:0005525;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013391034.1;locus_tag=LDO50_RS00905;product=YcjF family protein;protein_id=WP_060091853.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 2040 2255 . - . ID=gene-LDO50_RS00910;Name=LDO50_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00910;old_locus_tag=BVI1335_1030004 NZ_CAJZAO010000006.1 GeneMarkS-2+ CDS 2040 2255 . - 0 ID=cds-WP_145758058.1;Parent=gene-LDO50_RS00910;Dbxref=GenBank:WP_145758058.1;Name=WP_145758058.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS00910;product=hypothetical protein;protein_id=WP_145758058.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 2284 3891 . - . ID=gene-LDO50_RS00915;Name=LDO50_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00915;old_locus_tag=BVI1335_1030005 NZ_CAJZAO010000006.1 Protein Homology CDS 2284 3891 . - 0 ID=cds-WP_081071049.1;Parent=gene-LDO50_RS00915;Dbxref=GenBank:WP_081071049.1;Name=WP_081071049.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021352.6;locus_tag=LDO50_RS00915;product=DUF2357 domain-containing protein;protein_id=WP_081071049.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 3888 6134 . - . ID=gene-LDO50_RS00920;Name=LDO50_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00920;old_locus_tag=BVI1335_1030007 NZ_CAJZAO010000006.1 GeneMarkS-2+ CDS 3888 6134 . - 0 ID=cds-WP_155632579.1;Parent=gene-LDO50_RS00920;Dbxref=GenBank:WP_155632579.1;Name=WP_155632579.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS00920;product=McrB family protein;protein_id=WP_155632579.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 6841 7470 . - . ID=gene-LDO50_RS00925;Name=LDO50_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00925;old_locus_tag=BVI1335_1030009 NZ_CAJZAO010000006.1 GeneMarkS-2+ CDS 6841 7470 . - 0 ID=cds-WP_060091843.1;Parent=gene-LDO50_RS00925;Dbxref=GenBank:WP_060091843.1;Name=WP_060091843.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS00925;product=hypothetical protein;protein_id=WP_060091843.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 7675 8232 . - . ID=gene-LDO50_RS00930;Name=LDO50_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00930;old_locus_tag=BVI1335_1030011 NZ_CAJZAO010000006.1 GeneMarkS-2+ CDS 7675 8232 . - 0 ID=cds-WP_154234254.1;Parent=gene-LDO50_RS00930;Dbxref=GenBank:WP_154234254.1;Name=WP_154234254.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS00930;product=hypothetical protein;protein_id=WP_154234254.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 8477 8689 . + . ID=gene-LDO50_RS31020;Name=LDO50_RS31020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31020 NZ_CAJZAO010000006.1 Protein Homology CDS 8477 8689 . + 0 ID=cds-WP_081071048.1;Parent=gene-LDO50_RS31020;Dbxref=GenBank:WP_081071048.1;Name=WP_081071048.1;Ontology_term=GO:0001558,GO:0003677,GO:0003700,GO:0097351;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of cell growth|0001558||IEA;inference=COORDINATES: protein motif:HMM:NF015947.6;locus_tag=LDO50_RS31020;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_081071048.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 8893 9186 . + . ID=gene-LDO50_RS00935;Name=LDO50_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00935;old_locus_tag=BVI1335_1030013 NZ_CAJZAO010000006.1 Protein Homology CDS 8893 9186 . + 0 ID=cds-WP_060091889.1;Parent=gene-LDO50_RS00935;Dbxref=GenBank:WP_060091889.1;Name=WP_060091889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009519025.1;locus_tag=LDO50_RS00935;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_060091889.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 9305 10138 . - . ID=gene-LDO50_RS00940;Name=LDO50_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00940;old_locus_tag=BVI1335_1030014 NZ_CAJZAO010000006.1 GeneMarkS-2+ CDS 9305 10138 . - 0 ID=cds-WP_060091841.1;Parent=gene-LDO50_RS00940;Dbxref=GenBank:WP_060091841.1;Name=WP_060091841.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS00940;product=hypothetical protein;protein_id=WP_060091841.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 10487 11233 . + . ID=gene-LDO50_RS00945;Name=LDO50_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00945;old_locus_tag=BVI1335_1030015 NZ_CAJZAO010000006.1 Protein Homology CDS 10487 11233 . + 0 ID=cds-WP_060091838.1;Parent=gene-LDO50_RS00945;Dbxref=GenBank:WP_060091838.1;Name=WP_060091838.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037888.6;locus_tag=LDO50_RS00945;product=AbiU2 domain-containing protein;protein_id=WP_060091838.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 11304 11741 . + . ID=gene-LDO50_RS00950;Name=LDO50_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00950;old_locus_tag=BVI1335_1030017 NZ_CAJZAO010000006.1 Protein Homology CDS 11304 11741 . + 0 ID=cds-WP_050457205.1;Parent=gene-LDO50_RS00950;Dbxref=GenBank:WP_050457205.1;Name=WP_050457205.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045115.3;locus_tag=LDO50_RS00950;product=hypothetical protein;protein_id=WP_050457205.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 11884 12975 . - . ID=gene-LDO50_RS00955;Name=LDO50_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00955;old_locus_tag=BVI1335_1030018 NZ_CAJZAO010000006.1 Protein Homology CDS 11884 12975 . - 0 ID=cds-WP_081071047.1;Parent=gene-LDO50_RS00955;Dbxref=GenBank:WP_081071047.1;Name=WP_081071047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011871612.1;locus_tag=LDO50_RS00955;product=hypothetical protein;protein_id=WP_081071047.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 13255 13401 . - . ID=gene-LDO50_RS00960;Name=LDO50_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00960;old_locus_tag=BVI1335_1030019 NZ_CAJZAO010000006.1 GeneMarkS-2+ CDS 13255 13401 . - 0 ID=cds-WP_155632578.1;Parent=gene-LDO50_RS00960;Dbxref=GenBank:WP_155632578.1;Name=WP_155632578.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS00960;product=hypothetical protein;protein_id=WP_155632578.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 14096 14506 . - . ID=gene-LDO50_RS00965;Name=LDO50_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00965;old_locus_tag=BVI1335_1030022 NZ_CAJZAO010000006.1 GeneMarkS-2+ CDS 14096 14506 . - 0 ID=cds-WP_224019311.1;Parent=gene-LDO50_RS00965;Dbxref=GenBank:WP_224019311.1;Name=WP_224019311.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS00965;product=hypothetical protein;protein_id=WP_224019311.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 14507 14767 . - . ID=gene-LDO50_RS00970;Name=LDO50_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00970;old_locus_tag=BVI1335_1030023 NZ_CAJZAO010000006.1 GeneMarkS-2+ CDS 14507 14767 . - 0 ID=cds-WP_230943694.1;Parent=gene-LDO50_RS00970;Dbxref=GenBank:WP_230943694.1;Name=WP_230943694.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS00970;product=hypothetical protein;protein_id=WP_230943694.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 14991 17375 . - . ID=gene-LDO50_RS00975;Name=LDO50_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00975;old_locus_tag=BVI1335_1030024 NZ_CAJZAO010000006.1 Protein Homology CDS 14991 17375 . - 0 ID=cds-WP_175935952.1;Parent=gene-LDO50_RS00975;Dbxref=GenBank:WP_175935952.1;Name=WP_175935952.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024565.6;locus_tag=LDO50_RS00975;product=AAA family ATPase;protein_id=WP_175935952.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 17347 17529 . - . ID=gene-LDO50_RS00980;Name=LDO50_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00980 NZ_CAJZAO010000006.1 GeneMarkS-2+ CDS 17347 17529 . - 0 ID=cds-WP_166677048.1;Parent=gene-LDO50_RS00980;Dbxref=GenBank:WP_166677048.1;Name=WP_166677048.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS00980;product=hypothetical protein;protein_id=WP_166677048.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 17544 23474 . - . ID=gene-LDO50_RS00985;Name=LDO50_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00985;old_locus_tag=BVI1335_1030025 NZ_CAJZAO010000006.1 Protein Homology CDS 17544 23474 . - 0 ID=cds-WP_224019313.1;Parent=gene-LDO50_RS00985;Dbxref=GenBank:WP_224019313.1;Name=WP_224019313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013205337.1;locus_tag=LDO50_RS00985;product=DUF3320 domain-containing protein;protein_id=WP_224019313.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 24461 24721 . - . ID=gene-LDO50_RS00990;Name=LDO50_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00990;old_locus_tag=BVI1335_1030026 NZ_CAJZAO010000006.1 Protein Homology CDS 24461 24721 . - 0 ID=cds-WP_038742734.1;Parent=gene-LDO50_RS00990;Dbxref=GenBank:WP_038742734.1;Name=WP_038742734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009935573.1;locus_tag=LDO50_RS00990;product=DUF6471 domain-containing protein;protein_id=WP_038742734.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 24858 27563 . + . ID=gene-LDO50_RS00995;Name=LDO50_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS00995;old_locus_tag=BVI1335_1030027 NZ_CAJZAO010000006.1 Protein Homology CDS 24858 27563 . + 0 ID=cds-WP_060091827.1;Parent=gene-LDO50_RS00995;Dbxref=GenBank:WP_060091827.1;Name=WP_060091827.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881657.1;locus_tag=LDO50_RS00995;product=DDE-type integrase/transposase/recombinase;protein_id=WP_060091827.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 27572 28609 . + . ID=gene-LDO50_RS01000;Name=LDO50_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01000;old_locus_tag=BVI1335_1030028 NZ_CAJZAO010000006.1 Protein Homology CDS 27572 28609 . + 0 ID=cds-WP_060091825.1;Parent=gene-LDO50_RS01000;Dbxref=GenBank:WP_060091825.1;Name=WP_060091825.1;Ontology_term=GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012430539.1;locus_tag=LDO50_RS01000;product=AAA family ATPase;protein_id=WP_060091825.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 28606 29904 . + . ID=gene-LDO50_RS01005;Name=LDO50_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01005;old_locus_tag=BVI1335_1030029 NZ_CAJZAO010000006.1 Protein Homology CDS 28606 29904 . + 0 ID=cds-WP_060091823.1;Parent=gene-LDO50_RS01005;Dbxref=GenBank:WP_060091823.1;Name=WP_060091823.1;Ontology_term=GO:0015074,GO:0032196;gbkey=CDS;go_process=DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877615.1;locus_tag=LDO50_RS01005;product=TniQ family protein;protein_id=WP_060091823.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 30119 30197 . - . ID=gene-LDO50_RS01010;Name=LDO50_RS01010;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS01010;old_locus_tag=BVI1335_TRNA28 NZ_CAJZAO010000006.1 tRNAscan-SE tRNA 30119 30197 . - . ID=rna-LDO50_RS01010;Parent=gene-LDO50_RS01010;anticodon=(pos:complement(30159..30161));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS01010;product=tRNA-Ile NZ_CAJZAO010000006.1 tRNAscan-SE exon 30119 30197 . - . ID=exon-LDO50_RS01010-1;Parent=rna-LDO50_RS01010;anticodon=(pos:complement(30159..30161));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS01010;product=tRNA-Ile NZ_CAJZAO010000006.1 RefSeq gene 30337 32766 . - . ID=gene-LDO50_RS01015;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=LDO50_RS01015;old_locus_tag=BVI1335_1030030 NZ_CAJZAO010000006.1 Protein Homology CDS 30337 32766 . - 0 ID=cds-WP_072465298.1;Parent=gene-LDO50_RS01015;Dbxref=GenBank:WP_072465298.1;Name=WP_072465298.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658300.1;locus_tag=LDO50_RS01015;product=RNA polymerase sigma factor RpoD;protein_id=WP_072465298.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 32855 34726 . - . ID=gene-LDO50_RS01020;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=LDO50_RS01020;old_locus_tag=BVI1335_1030032 NZ_CAJZAO010000006.1 Protein Homology CDS 32855 34726 . - 0 ID=cds-WP_014724700.1;Parent=gene-LDO50_RS01020;Dbxref=GenBank:WP_014724700.1;Name=WP_014724700.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765502.1;locus_tag=LDO50_RS01020;product=DNA primase;protein_id=WP_014724700.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 34800 35246 . - . ID=gene-LDO50_RS01025;Name=LDO50_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01025;old_locus_tag=BVI1335_1030033 NZ_CAJZAO010000006.1 Protein Homology CDS 34800 35246 . - 0 ID=cds-WP_011881593.1;Parent=gene-LDO50_RS01025;Dbxref=GenBank:WP_011881593.1;Name=WP_011881593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881593.1;locus_tag=LDO50_RS01025;product=GatB/YqeY domain-containing protein;protein_id=WP_011881593.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 35432 35644 . - . ID=gene-LDO50_RS01030;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=LDO50_RS01030;old_locus_tag=BVI1335_1030034 NZ_CAJZAO010000006.1 Protein Homology CDS 35432 35644 . - 0 ID=cds-WP_006479415.1;Parent=gene-LDO50_RS01030;Dbxref=GenBank:WP_006479415.1;Name=WP_006479415.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011903537.1;locus_tag=LDO50_RS01030;product=30S ribosomal protein S21;protein_id=WP_006479415.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 35750 37099 . - . ID=gene-LDO50_RS01035;Name=LDO50_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01035;old_locus_tag=BVI1335_1030035 NZ_CAJZAO010000006.1 Protein Homology CDS 35750 37099 . - 0 ID=cds-WP_264169100.1;Parent=gene-LDO50_RS01035;Dbxref=GenBank:WP_264169100.1;Name=WP_264169100.1;Ontology_term=GO:0000166,GO:0050660,GO:0050661;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027812.1;locus_tag=LDO50_RS01035;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_264169100.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 37098 38138 . + . ID=gene-LDO50_RS01040;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=LDO50_RS01040;old_locus_tag=BVI1335_1030036 NZ_CAJZAO010000006.1 Protein Homology CDS 37098 38138 . + 0 ID=cds-WP_046424661.1;Parent=gene-LDO50_RS01040;Dbxref=GenBank:WP_046424661.1;Name=WP_046424661.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027813.1;locus_tag=LDO50_RS01040;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_046424661.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 38272 39081 . - . ID=gene-LDO50_RS01045;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=LDO50_RS01045;old_locus_tag=BVI1335_1030037 NZ_CAJZAO010000006.1 Protein Homology CDS 38272 39081 . - 0 ID=cds-WP_011881590.1;Parent=gene-LDO50_RS01045;Dbxref=GenBank:WP_011881590.1;Name=WP_011881590.1;Ontology_term=GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760425.1;locus_tag=LDO50_RS01045;product=GTP cyclohydrolase FolE2;protein_id=WP_011881590.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 39204 41108 . - . ID=gene-LDO50_RS01050;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=LDO50_RS01050;old_locus_tag=BVI1335_1030038 NZ_CAJZAO010000006.1 Protein Homology CDS 39204 41108 . - 0 ID=cds-WP_014724697.1;Parent=gene-LDO50_RS01050;Dbxref=GenBank:WP_014724697.1;Name=WP_014724697.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338492.1;locus_tag=LDO50_RS01050;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_014724697.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 41189 42073 . - . ID=gene-LDO50_RS01055;Name=LDO50_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01055;old_locus_tag=BVI1335_1030039 NZ_CAJZAO010000006.1 Protein Homology CDS 41189 42073 . - 0 ID=cds-WP_011881588.1;Parent=gene-LDO50_RS01055;Dbxref=GenBank:WP_011881588.1;Name=WP_011881588.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486453.1;locus_tag=LDO50_RS01055;product=polyprenyl synthetase family protein;protein_id=WP_011881588.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 42070 42363 . - . ID=gene-LDO50_RS01060;Name=LDO50_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01060;old_locus_tag=BVI1335_1030040 NZ_CAJZAO010000006.1 Protein Homology CDS 42070 42363 . - 0 ID=cds-WP_011881587.1;Parent=gene-LDO50_RS01060;Dbxref=GenBank:WP_011881587.1;Name=WP_011881587.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399451.1;locus_tag=LDO50_RS01060;product=exodeoxyribonuclease VII small subunit;protein_id=WP_011881587.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 42634 43740 . + . ID=gene-LDO50_RS01065;Name=LDO50_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01065;old_locus_tag=BVI1335_1030041 NZ_CAJZAO010000006.1 Protein Homology CDS 42634 43740 . + 0 ID=cds-WP_011881585.1;Parent=gene-LDO50_RS01065;Dbxref=GenBank:WP_011881585.1;Name=WP_011881585.1;Ontology_term=GO:0005506,GO:0016705,GO:0051537;gbkey=CDS;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486437.1;locus_tag=LDO50_RS01065;product=aromatic ring-hydroxylating oxygenase subunit alpha;protein_id=WP_011881585.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 43858 44727 . + . ID=gene-LDO50_RS01070;Name=LDO50_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01070;old_locus_tag=BVI1335_1030042 NZ_CAJZAO010000006.1 Protein Homology CDS 43858 44727 . + 0 ID=cds-WP_014724694.1;Parent=gene-LDO50_RS01070;Dbxref=GenBank:WP_014724694.1;Name=WP_014724694.1;Ontology_term=GO:0000098,GO:0016783;gbkey=CDS;go_function=sulfurtransferase activity|0016783||IEA;go_process=sulfur amino acid catabolic process|0000098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529026.1;locus_tag=LDO50_RS01070;product=sulfurtransferase;protein_id=WP_014724694.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 44777 45652 . - . ID=gene-LDO50_RS01075;Name=LDO50_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01075;old_locus_tag=BVI1335_1030043 NZ_CAJZAO010000006.1 Protein Homology CDS 44777 45652 . - 0 ID=cds-WP_014724693.1;Parent=gene-LDO50_RS01075;Dbxref=GenBank:WP_014724693.1;Name=WP_014724693.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414604.1;locus_tag=LDO50_RS01075;product=dienelactone hydrolase family protein;protein_id=WP_014724693.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 46016 47350 . - . ID=gene-LDO50_RS01080;Name=LDO50_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01080;old_locus_tag=BVI1335_1030044 NZ_CAJZAO010000006.1 Protein Homology CDS 46016 47350 . - 0 ID=cds-WP_046424659.1;Parent=gene-LDO50_RS01080;Dbxref=GenBank:WP_046424659.1;Name=WP_046424659.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190401.1;locus_tag=LDO50_RS01080;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_046424659.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 47629 50382 . - . ID=gene-LDO50_RS01085;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=LDO50_RS01085;old_locus_tag=BVI1335_1030045 NZ_CAJZAO010000006.1 Protein Homology CDS 47629 50382 . - 0 ID=cds-WP_034194991.1;Parent=gene-LDO50_RS01085;Dbxref=GenBank:WP_034194991.1;Name=WP_034194991.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761695.1;locus_tag=LDO50_RS01085;product=DNA polymerase I;protein_id=WP_034194991.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 50384 51142 . + . ID=gene-LDO50_RS01090;Name=LDO50_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01090;old_locus_tag=BVI1335_1030046 NZ_CAJZAO010000006.1 Protein Homology CDS 50384 51142 . + 0 ID=cds-WP_011881579.1;Parent=gene-LDO50_RS01090;Dbxref=GenBank:WP_011881579.1;Name=WP_011881579.1;Ontology_term=GO:0009691,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881579.1;locus_tag=LDO50_RS01090;product=TIGR00730 family Rossman fold protein;protein_id=WP_011881579.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 51525 51803 . + . ID=gene-LDO50_RS01095;Name=LDO50_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01095;old_locus_tag=BVI1335_1030047 NZ_CAJZAO010000006.1 Protein Homology CDS 51525 51803 . + 0 ID=cds-WP_011881578.1;Parent=gene-LDO50_RS01095;Dbxref=GenBank:WP_011881578.1;Name=WP_011881578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900025.1;locus_tag=LDO50_RS01095;product=hypothetical protein;protein_id=WP_011881578.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 51920 53446 . - . ID=gene-LDO50_RS01100;Name=LDO50_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01100;old_locus_tag=BVI1335_1030048 NZ_CAJZAO010000006.1 Protein Homology CDS 51920 53446 . - 0 ID=cds-WP_014724651.1;Parent=gene-LDO50_RS01100;Dbxref=GenBank:WP_014724651.1;Name=WP_014724651.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529041.1;locus_tag=LDO50_RS01100;product=AMP nucleosidase;protein_id=WP_014724651.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 53588 53992 . + . ID=gene-LDO50_RS01105;Name=LDO50_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01105;old_locus_tag=BVI1335_1030049 NZ_CAJZAO010000006.1 Protein Homology CDS 53588 53992 . + 0 ID=cds-WP_011881576.1;Parent=gene-LDO50_RS01105;Dbxref=GenBank:WP_011881576.1;Name=WP_011881576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010110125.1;locus_tag=LDO50_RS01105;product=hypothetical protein;protein_id=WP_011881576.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 54095 55093 . + . ID=gene-LDO50_RS01110;Name=LDO50_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01110;old_locus_tag=BVI1335_1030050 NZ_CAJZAO010000006.1 Protein Homology CDS 54095 55093 . + 0 ID=cds-WP_224019315.1;Parent=gene-LDO50_RS01110;Dbxref=GenBank:WP_224019315.1;Name=WP_224019315.1;Ontology_term=GO:0009088,GO:0004413;gbkey=CDS;go_function=homoserine kinase activity|0004413||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254414.1;locus_tag=LDO50_RS01110;product=homoserine kinase;protein_id=WP_224019315.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 55084 55893 . + . ID=gene-LDO50_RS01115;Name=LDO50_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01115;old_locus_tag=BVI1335_1030052 NZ_CAJZAO010000006.1 Protein Homology CDS 55084 55893 . + 0 ID=cds-WP_011881574.1;Parent=gene-LDO50_RS01115;Dbxref=GenBank:WP_011881574.1;Name=WP_011881574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496010.1;locus_tag=LDO50_RS01115;product=BPSS1780 family membrane protein;protein_id=WP_011881574.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 56055 56507 . + . ID=gene-LDO50_RS01120;Name=LDO50_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01120;old_locus_tag=BVI1335_1030051 NZ_CAJZAO010000006.1 Protein Homology CDS 56055 56507 . + 0 ID=cds-WP_014724649.1;Parent=gene-LDO50_RS01120;Dbxref=GenBank:WP_014724649.1;Name=WP_014724649.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724649.1;locus_tag=LDO50_RS01120;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_014724649.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 56657 57076 . + . ID=gene-LDO50_RS01125;Name=LDO50_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01125;old_locus_tag=BVI1335_1030053 NZ_CAJZAO010000006.1 Protein Homology CDS 56657 57076 . + 0 ID=cds-WP_014724648.1;Parent=gene-LDO50_RS01125;Dbxref=GenBank:WP_014724648.1;Name=WP_014724648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900033.1;locus_tag=LDO50_RS01125;product=organic hydroperoxide resistance protein;protein_id=WP_014724648.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 57188 57364 . - . ID=gene-LDO50_RS01130;Name=LDO50_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01130;old_locus_tag=BVI1335_1030054 NZ_CAJZAO010000006.1 Protein Homology CDS 57188 57364 . - 0 ID=cds-WP_011881571.1;Parent=gene-LDO50_RS01130;Dbxref=GenBank:WP_011881571.1;Name=WP_011881571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548159.1;locus_tag=LDO50_RS01130;product=DUF3563 family protein;protein_id=WP_011881571.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 57446 58555 . - . ID=gene-LDO50_RS01135;Name=LDO50_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01135;old_locus_tag=BVI1335_1030055 NZ_CAJZAO010000006.1 Protein Homology CDS 57446 58555 . - 0 ID=cds-WP_045578180.1;Parent=gene-LDO50_RS01135;Dbxref=GenBank:WP_045578180.1;Name=WP_045578180.1;Ontology_term=GO:0050526;gbkey=CDS;go_function=poly(3-hydroxybutyrate) depolymerase activity|0050526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658279.1;locus_tag=LDO50_RS01135;product=extracellular catalytic domain type 1 short-chain-length polyhydroxyalkanoate depolymerase;protein_id=WP_045578180.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 58804 59499 . + . ID=gene-LDO50_RS01140;Name=LDO50_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01140;old_locus_tag=BVI1335_1030057 NZ_CAJZAO010000006.1 Protein Homology CDS 58804 59499 . + 0 ID=cds-WP_014724646.1;Parent=gene-LDO50_RS01140;Dbxref=GenBank:WP_014724646.1;Name=WP_014724646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765478.1;locus_tag=LDO50_RS01140;product=phosphatase PAP2 family protein;protein_id=WP_014724646.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 59638 60435 . + . ID=gene-LDO50_RS01145;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=LDO50_RS01145;old_locus_tag=BVI1335_1030058 NZ_CAJZAO010000006.1 Protein Homology CDS 59638 60435 . + 0 ID=cds-WP_059890278.1;Parent=gene-LDO50_RS01145;Dbxref=GenBank:WP_059890278.1;Name=WP_059890278.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753392.1;locus_tag=LDO50_RS01145;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_059890278.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 60446 61123 . + . ID=gene-LDO50_RS01150;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=LDO50_RS01150;old_locus_tag=BVI1335_1030059 NZ_CAJZAO010000006.1 Protein Homology CDS 60446 61123 . + 0 ID=cds-WP_041494272.1;Parent=gene-LDO50_RS01150;Dbxref=GenBank:WP_041494272.1;Name=WP_041494272.1;Ontology_term=GO:0015689,GO:0015412,GO:0005886,GO:0055052;gbkey=CDS;gene=modB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479455.1;locus_tag=LDO50_RS01150;product=molybdate ABC transporter permease subunit;protein_id=WP_041494272.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 61206 61907 . + . ID=gene-LDO50_RS01155;Name=LDO50_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01155;old_locus_tag=BVI1335_1030060 NZ_CAJZAO010000006.1 Protein Homology CDS 61206 61907 . + 0 ID=cds-WP_034194985.1;Parent=gene-LDO50_RS01155;Dbxref=GenBank:WP_034194985.1;Name=WP_034194985.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486467.1;locus_tag=LDO50_RS01155;product=ATP-binding cassette domain-containing protein;protein_id=WP_034194985.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 62148 62288 . - . ID=gene-LDO50_RS01160;Name=LDO50_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01160 NZ_CAJZAO010000006.1 Protein Homology CDS 62148 62288 . - 0 ID=cds-WP_081053495.1;Parent=gene-LDO50_RS01160;Dbxref=GenBank:WP_081053495.1;Name=WP_081053495.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015424.6;locus_tag=LDO50_RS01160;product=TOBE domain-containing protein;protein_id=WP_081053495.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 62305 63156 . - . ID=gene-LDO50_RS01165;Name=LDO50_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01165;old_locus_tag=BVI1335_1030061 NZ_CAJZAO010000006.1 Protein Homology CDS 62305 63156 . - 0 ID=cds-WP_034194984.1;Parent=gene-LDO50_RS01165;Dbxref=GenBank:WP_034194984.1;Name=WP_034194984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365619.1;locus_tag=LDO50_RS01165;product=TOBE domain-containing protein;protein_id=WP_034194984.1;transl_table=11 NZ_CAJZAO010000006.1 RefSeq gene 63222 63758 . - . ID=gene-LDO50_RS01170;Name=LDO50_RS01170;end_range=63758,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01170;old_locus_tag=BVI1335_1030062;partial=true NZ_CAJZAO010000006.1 Protein Homology CDS 63222 63758 . - 0 ID=cds-WP_224019316.1;Parent=gene-LDO50_RS01170;Dbxref=GenBank:WP_224019316.1;Name=WP_224019316.1;end_range=63758,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761231.1;locus_tag=LDO50_RS01170;partial=true;product=CHAD domain-containing protein;protein_id=WP_224019316.1;transl_table=11 ##sequence-region NZ_CAJZAO010000007.1 1 59119 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000007.1 RefSeq region 1 59119 . + . ID=NZ_CAJZAO010000007.1:1..59119;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_104 NZ_CAJZAO010000007.1 RefSeq pseudogene 1 627 . + . ID=gene-LDO50_RS01175;Name=LDO50_RS01175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS01175;old_locus_tag=BVI1335_1040001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000007.1 Protein Homology CDS 1 627 . + 0 ID=cds-LDO50_RS01175;Parent=gene-LDO50_RS01175;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336984.1;locus_tag=LDO50_RS01175;partial=true;product=excinuclease ABC subunit UvrA;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 835 1284 . - . ID=gene-LDO50_RS01180;Name=LDO50_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01180;old_locus_tag=BVI1335_1040003 NZ_CAJZAO010000007.1 Protein Homology CDS 835 1284 . - 0 ID=cds-WP_124260142.1;Parent=gene-LDO50_RS01180;Dbxref=GenBank:WP_124260142.1;Name=WP_124260142.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880551.1;locus_tag=LDO50_RS01180;product=GtrA family protein;protein_id=WP_124260142.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 1281 2789 . - . ID=gene-LDO50_RS01185;Name=LDO50_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01185;old_locus_tag=BVI1335_1040004 NZ_CAJZAO010000007.1 Protein Homology CDS 1281 2789 . - 0 ID=cds-WP_124260143.1;Parent=gene-LDO50_RS01185;Dbxref=GenBank:WP_124260143.1;Name=WP_124260143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880550.1;locus_tag=LDO50_RS01185;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_124260143.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 2891 4927 . - . ID=gene-LDO50_RS01190;Name=LDO50_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01190;old_locus_tag=BVI1335_1040005 NZ_CAJZAO010000007.1 Protein Homology CDS 2891 4927 . - 0 ID=cds-WP_059461684.1;Parent=gene-LDO50_RS01190;Dbxref=GenBank:WP_059461684.1;Name=WP_059461684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726193.1;locus_tag=LDO50_RS01190;product=hypothetical protein;protein_id=WP_059461684.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 5102 5710 . - . ID=gene-LDO50_RS01195;Name=LDO50_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01195 NZ_CAJZAO010000007.1 GeneMarkS-2+ CDS 5102 5710 . - 0 ID=cds-WP_124260144.1;Parent=gene-LDO50_RS01195;Dbxref=GenBank:WP_124260144.1;Name=WP_124260144.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS01195;product=hypothetical protein;protein_id=WP_124260144.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 5879 6784 . - . ID=gene-LDO50_RS01200;Name=LDO50_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01200;old_locus_tag=BVI1335_1040007 NZ_CAJZAO010000007.1 Protein Homology CDS 5879 6784 . - 0 ID=cds-WP_011880547.1;Parent=gene-LDO50_RS01200;Dbxref=GenBank:WP_011880547.1;Name=WP_011880547.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337044.1;locus_tag=LDO50_RS01200;product=LysR family transcriptional regulator;protein_id=WP_011880547.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 6905 7498 . + . ID=gene-LDO50_RS01205;Name=LDO50_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01205;old_locus_tag=BVI1335_1040008 NZ_CAJZAO010000007.1 Protein Homology CDS 6905 7498 . + 0 ID=cds-WP_059461681.1;Parent=gene-LDO50_RS01205;Dbxref=GenBank:WP_059461681.1;Name=WP_059461681.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366281.1;locus_tag=LDO50_RS01205;product=flavodoxin family protein;protein_id=WP_059461681.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 7571 8626 . + . ID=gene-LDO50_RS01210;Name=LDO50_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01210;old_locus_tag=BVI1335_1040009 NZ_CAJZAO010000007.1 Protein Homology CDS 7571 8626 . + 0 ID=cds-WP_059461680.1;Parent=gene-LDO50_RS01210;Dbxref=GenBank:WP_059461680.1;Name=WP_059461680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549240.1;locus_tag=LDO50_RS01210;product=aldo/keto reductase;protein_id=WP_059461680.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 8696 9424 . - . ID=gene-LDO50_RS01215;Name=LDO50_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01215;old_locus_tag=BVI1335_1040010 NZ_CAJZAO010000007.1 Protein Homology CDS 8696 9424 . - 0 ID=cds-WP_011880544.1;Parent=gene-LDO50_RS01215;Dbxref=GenBank:WP_011880544.1;Name=WP_011880544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880544.1;locus_tag=LDO50_RS01215;product=ABC transporter substrate-binding protein;protein_id=WP_011880544.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 9570 9863 . - . ID=gene-LDO50_RS01220;Name=LDO50_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01220;old_locus_tag=BVI1335_1040011 NZ_CAJZAO010000007.1 Protein Homology CDS 9570 9863 . - 0 ID=cds-WP_011880543.1;Parent=gene-LDO50_RS01220;Dbxref=GenBank:WP_011880543.1;Name=WP_011880543.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726186.1;locus_tag=LDO50_RS01220;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_011880543.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 10069 11514 . + . ID=gene-LDO50_RS01225;Name=LDO50_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01225;old_locus_tag=BVI1335_1040012 NZ_CAJZAO010000007.1 Protein Homology CDS 10069 11514 . + 0 ID=cds-WP_059461679.1;Parent=gene-LDO50_RS01225;Dbxref=GenBank:WP_059461679.1;Name=WP_059461679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485550.1;locus_tag=LDO50_RS01225;product=HD domain-containing phosphohydrolase;protein_id=WP_059461679.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 11581 13353 . + . ID=gene-LDO50_RS01230;Name=LDO50_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01230;old_locus_tag=BVI1335_1040013 NZ_CAJZAO010000007.1 Protein Homology CDS 11581 13353 . + 0 ID=cds-WP_011880541.1;Parent=gene-LDO50_RS01230;Dbxref=GenBank:WP_011880541.1;Name=WP_011880541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880541.1;locus_tag=LDO50_RS01230;product=histidine kinase;protein_id=WP_011880541.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 13376 14452 . - . ID=gene-LDO50_RS01235;Name=LDO50_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01235;old_locus_tag=BVI1335_1040014 NZ_CAJZAO010000007.1 Protein Homology CDS 13376 14452 . - 0 ID=cds-WP_043292697.1;Parent=gene-LDO50_RS01235;Dbxref=GenBank:WP_043292697.1;Name=WP_043292697.1;Ontology_term=GO:0050526;gbkey=CDS;go_function=poly(3-hydroxybutyrate) depolymerase activity|0050526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753340.1;locus_tag=LDO50_RS01235;product=extracellular catalytic domain type 1 short-chain-length polyhydroxyalkanoate depolymerase;protein_id=WP_043292697.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 14791 15174 . - . ID=gene-LDO50_RS01240;Name=LDO50_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01240;old_locus_tag=BVI1335_1040015 NZ_CAJZAO010000007.1 Protein Homology CDS 14791 15174 . - 0 ID=cds-WP_011880539.1;Parent=gene-LDO50_RS01240;Dbxref=GenBank:WP_011880539.1;Name=WP_011880539.1;Ontology_term=GO:0000271,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661156.1;locus_tag=LDO50_RS01240;product=GtrA family protein;protein_id=WP_011880539.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 15191 16234 . - . ID=gene-LDO50_RS01245;Name=LDO50_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01245;old_locus_tag=BVI1335_1040016 NZ_CAJZAO010000007.1 Protein Homology CDS 15191 16234 . - 0 ID=cds-WP_011880538.1;Parent=gene-LDO50_RS01245;Dbxref=GenBank:WP_011880538.1;Name=WP_011880538.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004548396.1;locus_tag=LDO50_RS01245;product=glycosyltransferase family 2 protein;protein_id=WP_011880538.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 16259 17638 . - . ID=gene-LDO50_RS01250;Name=LDO50_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01250;old_locus_tag=BVI1335_1040017 NZ_CAJZAO010000007.1 Protein Homology CDS 16259 17638 . - 0 ID=cds-WP_011880537.1;Parent=gene-LDO50_RS01250;Dbxref=GenBank:WP_011880537.1;Name=WP_011880537.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336897.1;locus_tag=LDO50_RS01250;product=glycosyltransferase family 87 protein;protein_id=WP_011880537.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 17635 18873 . - . ID=gene-LDO50_RS01255;Name=LDO50_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01255;old_locus_tag=BVI1335_1040018 NZ_CAJZAO010000007.1 Protein Homology CDS 17635 18873 . - 0 ID=cds-WP_011880536.1;Parent=gene-LDO50_RS01255;Dbxref=GenBank:WP_011880536.1;Name=WP_011880536.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753344.1;locus_tag=LDO50_RS01255;product=glycosyltransferase family 87 protein;protein_id=WP_011880536.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 19913 20095 . + . ID=gene-LDO50_RS01260;Name=LDO50_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01260;old_locus_tag=BVI1335_1040019 NZ_CAJZAO010000007.1 Protein Homology CDS 19913 20095 . + 0 ID=cds-WP_011880534.1;Parent=gene-LDO50_RS01260;Dbxref=GenBank:WP_011880534.1;Name=WP_011880534.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372332.1;locus_tag=LDO50_RS01260;product=Flp family type IVb pilin;protein_id=WP_011880534.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 20266 20472 . + . ID=gene-LDO50_RS01265;Name=LDO50_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01265;old_locus_tag=BVI1335_1040020 NZ_CAJZAO010000007.1 Protein Homology CDS 20266 20472 . + 0 ID=cds-WP_011880533.1;Parent=gene-LDO50_RS01265;Dbxref=GenBank:WP_011880533.1;Name=WP_011880533.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880533.1;locus_tag=LDO50_RS01265;product=Flp family type IVb pilin;protein_id=WP_011880533.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 20504 21043 . + . ID=gene-LDO50_RS01270;Name=LDO50_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01270;old_locus_tag=BVI1335_1040022 NZ_CAJZAO010000007.1 Protein Homology CDS 20504 21043 . + 0 ID=cds-WP_011880532.1;Parent=gene-LDO50_RS01270;Dbxref=GenBank:WP_011880532.1;Name=WP_011880532.1;Ontology_term=GO:0006508,GO:0004190;gbkey=CDS;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549057.1;locus_tag=LDO50_RS01270;product=A24 family peptidase;protein_id=WP_011880532.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 21076 22476 . + . ID=gene-LDO50_RS01275;Name=LDO50_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01275;old_locus_tag=BVI1335_1040021 NZ_CAJZAO010000007.1 Protein Homology CDS 21076 22476 . + 0 ID=cds-WP_011880531.1;Parent=gene-LDO50_RS01275;Dbxref=GenBank:WP_011880531.1;Name=WP_011880531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498089.1;locus_tag=LDO50_RS01275;product=ATP-binding protein;protein_id=WP_011880531.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 22512 23357 . + . ID=gene-LDO50_RS01280;Name=cpaB;gbkey=Gene;gene=cpaB;gene_biotype=protein_coding;locus_tag=LDO50_RS01280;old_locus_tag=BVI1335_1040023 NZ_CAJZAO010000007.1 Protein Homology CDS 22512 23357 . + 0 ID=cds-WP_011880530.1;Parent=gene-LDO50_RS01280;Dbxref=GenBank:WP_011880530.1;Name=WP_011880530.1;gbkey=CDS;gene=cpaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603420.1;locus_tag=LDO50_RS01280;product=Flp pilus assembly protein CpaB;protein_id=WP_011880530.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 23470 25653 . + . ID=gene-LDO50_RS01285;Name=LDO50_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01285;old_locus_tag=BVI1335_1040024 NZ_CAJZAO010000007.1 Protein Homology CDS 23470 25653 . + 0 ID=cds-WP_372586076.1;Parent=gene-LDO50_RS01285;Dbxref=GenBank:WP_372586076.1;Name=WP_372586076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853903.1;locus_tag=LDO50_RS01285;product=type II and III secretion system protein family protein;protein_id=WP_372586076.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 25833 26861 . + . ID=gene-LDO50_RS01290;Name=LDO50_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01290;old_locus_tag=BVI1335_1040026 NZ_CAJZAO010000007.1 Protein Homology CDS 25833 26861 . + 0 ID=cds-WP_034193982.1;Parent=gene-LDO50_RS01290;Dbxref=GenBank:WP_034193982.1;Name=WP_034193982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753612.1;locus_tag=LDO50_RS01290;product=transporter;protein_id=WP_034193982.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 26977 29145 . - . ID=gene-LDO50_RS01295;Name=LDO50_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01295;old_locus_tag=BVI1335_1040028 NZ_CAJZAO010000007.1 Protein Homology CDS 26977 29145 . - 0 ID=cds-WP_224019317.1;Parent=gene-LDO50_RS01295;Dbxref=GenBank:WP_224019317.1;Name=WP_224019317.1;Ontology_term=GO:0006508,GO:0008233,GO:0008235,GO:0008270,GO:0046872;gbkey=CDS;go_function=peptidase activity|0008233||IEA,metalloexopeptidase activity|0008235||IEA,zinc ion binding|0008270||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411754.1;locus_tag=LDO50_RS01295;product=M1 family metallopeptidase;protein_id=WP_224019317.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 29791 30285 . + . ID=gene-LDO50_RS01300;Name=LDO50_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01300;old_locus_tag=BVI1335_1040031 NZ_CAJZAO010000007.1 Protein Homology CDS 29791 30285 . + 0 ID=cds-WP_011883121.1;Parent=gene-LDO50_RS01300;Dbxref=GenBank:WP_011883121.1;Name=WP_011883121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362981.1;locus_tag=LDO50_RS01300;product=LEA type 2 family protein;protein_id=WP_011883121.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 30384 31517 . + . ID=gene-LDO50_RS01305;Name=LDO50_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01305;old_locus_tag=BVI1335_1040030 NZ_CAJZAO010000007.1 Protein Homology CDS 30384 31517 . + 0 ID=cds-WP_034193980.1;Parent=gene-LDO50_RS01305;Dbxref=GenBank:WP_034193980.1;Name=WP_034193980.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898242.1;locus_tag=LDO50_RS01305;product=methyltransferase;protein_id=WP_034193980.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 31607 32497 . + . ID=gene-LDO50_RS01310;Name=LDO50_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01310;old_locus_tag=BVI1335_1040032 NZ_CAJZAO010000007.1 Protein Homology CDS 31607 32497 . + 0 ID=cds-WP_011883123.1;Parent=gene-LDO50_RS01310;Dbxref=GenBank:WP_011883123.1;Name=WP_011883123.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400515.1;locus_tag=LDO50_RS01310;product=class I SAM-dependent methyltransferase;protein_id=WP_011883123.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 32562 33143 . - . ID=gene-LDO50_RS01315;Name=LDO50_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01315;old_locus_tag=BVI1335_1040033 NZ_CAJZAO010000007.1 Protein Homology CDS 32562 33143 . - 0 ID=cds-WP_059475570.1;Parent=gene-LDO50_RS01315;Dbxref=GenBank:WP_059475570.1;Name=WP_059475570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333668.1;locus_tag=LDO50_RS01315;product=DUF1415 domain-containing protein;protein_id=WP_059475570.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 33226 33849 . - . ID=gene-LDO50_RS01320;Name=LDO50_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01320;old_locus_tag=BVI1335_1040035 NZ_CAJZAO010000007.1 Protein Homology CDS 33226 33849 . - 0 ID=cds-WP_059475560.1;Parent=gene-LDO50_RS01320;Dbxref=GenBank:WP_059475560.1;Name=WP_059475560.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214227.1;locus_tag=LDO50_RS01320;product=TetR/AcrR family transcriptional regulator;protein_id=WP_059475560.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 34067 35353 . + . ID=gene-LDO50_RS01325;Name=LDO50_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01325;old_locus_tag=BVI1335_1040037 NZ_CAJZAO010000007.1 Protein Homology CDS 34067 35353 . + 0 ID=cds-WP_011883126.1;Parent=gene-LDO50_RS01325;Dbxref=GenBank:WP_011883126.1;Name=WP_011883126.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883126.1;locus_tag=LDO50_RS01325;product=MFS transporter;protein_id=WP_011883126.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 35758 36363 . + . ID=gene-LDO50_RS01330;Name=LDO50_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01330;old_locus_tag=BVI1335_1040036 NZ_CAJZAO010000007.1 Protein Homology CDS 35758 36363 . + 0 ID=cds-WP_014722357.1;Parent=gene-LDO50_RS01330;Dbxref=GenBank:WP_014722357.1;Name=WP_014722357.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350786.1;locus_tag=LDO50_RS01330;product=nitroreductase family protein;protein_id=WP_014722357.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 36644 37894 . + . ID=gene-LDO50_RS01335;Name=LDO50_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01335;old_locus_tag=BVI1335_1040038 NZ_CAJZAO010000007.1 Protein Homology CDS 36644 37894 . + 0 ID=cds-WP_224019318.1;Parent=gene-LDO50_RS01335;Dbxref=GenBank:WP_224019318.1;Name=WP_224019318.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414128.1;locus_tag=LDO50_RS01335;product=Hsp70 family protein;protein_id=WP_224019318.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 38017 38220 . - . ID=gene-LDO50_RS01340;Name=LDO50_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01340;old_locus_tag=BVI1335_1040039 NZ_CAJZAO010000007.1 Protein Homology CDS 38017 38220 . - 0 ID=cds-WP_006477070.1;Parent=gene-LDO50_RS01340;Dbxref=GenBank:WP_006477070.1;Name=WP_006477070.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196837.1;locus_tag=LDO50_RS01340;product=cold-shock protein;protein_id=WP_006477070.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 38640 40238 . + . ID=gene-LDO50_RS01345;Name=LDO50_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01345;old_locus_tag=BVI1335_1040040 NZ_CAJZAO010000007.1 Protein Homology CDS 38640 40238 . + 0 ID=cds-WP_011883129.1;Parent=gene-LDO50_RS01345;Dbxref=GenBank:WP_011883129.1;Name=WP_011883129.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186824.1;locus_tag=LDO50_RS01345;product=APC family permease;protein_id=WP_011883129.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 40345 41136 . - . ID=gene-LDO50_RS01350;Name=LDO50_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01350;old_locus_tag=BVI1335_1040041 NZ_CAJZAO010000007.1 Protein Homology CDS 40345 41136 . - 0 ID=cds-WP_011883130.1;Parent=gene-LDO50_RS01350;Dbxref=GenBank:WP_011883130.1;Name=WP_011883130.1;Ontology_term=GO:0008270,GO:0016701,GO:0046872,GO:0051213;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen|0016701||IEA,metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362990.1;locus_tag=LDO50_RS01350;product=DODA-type extradiol aromatic ring-opening family dioxygenase;protein_id=WP_011883130.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 41361 41957 . - . ID=gene-LDO50_RS01355;Name=LDO50_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01355;old_locus_tag=BVI1335_1040042 NZ_CAJZAO010000007.1 Protein Homology CDS 41361 41957 . - 0 ID=cds-WP_011883131.1;Parent=gene-LDO50_RS01355;Dbxref=GenBank:WP_011883131.1;Name=WP_011883131.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327818.1;locus_tag=LDO50_RS01355;product=UbiX family flavin prenyltransferase;protein_id=WP_011883131.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 41970 42281 . - . ID=gene-LDO50_RS01360;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=LDO50_RS01360;old_locus_tag=BVI1335_1040043 NZ_CAJZAO010000007.1 Protein Homology CDS 41970 42281 . - 0 ID=cds-WP_011883132.1;Parent=gene-LDO50_RS01360;Dbxref=GenBank:WP_011883132.1;Name=WP_011883132.1;Ontology_term=GO:0009055;gbkey=CDS;gene=grxD;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018420101.1;locus_tag=LDO50_RS01360;product=Grx4 family monothiol glutaredoxin;protein_id=WP_011883132.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 42349 43191 . - . ID=gene-LDO50_RS01365;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=LDO50_RS01365;old_locus_tag=BVI1335_1040044 NZ_CAJZAO010000007.1 Protein Homology CDS 42349 43191 . - 0 ID=cds-WP_011883133.1;Parent=gene-LDO50_RS01365;Dbxref=GenBank:WP_011883133.1;Name=WP_011883133.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350792.1;locus_tag=LDO50_RS01365;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_011883133.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 43199 44281 . - . ID=gene-LDO50_RS01370;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=LDO50_RS01370;old_locus_tag=BVI1335_1040045 NZ_CAJZAO010000007.1 Protein Homology CDS 43199 44281 . - 0 ID=cds-WP_014722360.1;Parent=gene-LDO50_RS01370;Dbxref=GenBank:WP_014722360.1;Name=WP_014722360.1;Ontology_term=GO:0006415,GO:0016149;gbkey=CDS;gene=prfA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883134.1;locus_tag=LDO50_RS01370;product=peptide chain release factor 1;protein_id=WP_014722360.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 44362 45660 . - . ID=gene-LDO50_RS01375;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=LDO50_RS01375;old_locus_tag=BVI1335_1040046 NZ_CAJZAO010000007.1 Protein Homology CDS 44362 45660 . - 0 ID=cds-WP_011883135.1;Parent=gene-LDO50_RS01375;Dbxref=GenBank:WP_011883135.1;Name=WP_011883135.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214219.1;locus_tag=LDO50_RS01375;product=glutamyl-tRNA reductase;protein_id=WP_011883135.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 45732 46448 . - . ID=gene-LDO50_RS01380;Name=LDO50_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01380;old_locus_tag=BVI1335_1040047 NZ_CAJZAO010000007.1 Protein Homology CDS 45732 46448 . - 0 ID=cds-WP_011883136.1;Parent=gene-LDO50_RS01380;Dbxref=GenBank:WP_011883136.1;Name=WP_011883136.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883136.1;locus_tag=LDO50_RS01380;product=response regulator transcription factor;protein_id=WP_011883136.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 46625 46879 . + . ID=gene-LDO50_RS01385;Name=LDO50_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01385;old_locus_tag=BVI1335_1040048 NZ_CAJZAO010000007.1 Protein Homology CDS 46625 46879 . + 0 ID=cds-WP_011883137.1;Parent=gene-LDO50_RS01385;Dbxref=GenBank:WP_011883137.1;Name=WP_011883137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883137.1;locus_tag=LDO50_RS01385;product=hypothetical protein;protein_id=WP_011883137.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 46898 48712 . + . ID=gene-LDO50_RS01390;Name=LDO50_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01390;old_locus_tag=BVI1335_1040049 NZ_CAJZAO010000007.1 Protein Homology CDS 46898 48712 . + 0 ID=cds-WP_011883138.1;Parent=gene-LDO50_RS01390;Dbxref=GenBank:WP_011883138.1;Name=WP_011883138.1;Ontology_term=GO:0006508,GO:0004177,GO:0046872,GO:0070006,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aminopeptidase activity|0004177||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106698.1;locus_tag=LDO50_RS01390;product=aminopeptidase P family protein;protein_id=WP_011883138.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 48787 49338 . + . ID=gene-LDO50_RS01395;Name=LDO50_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01395;old_locus_tag=BVI1335_1040050 NZ_CAJZAO010000007.1 Protein Homology CDS 48787 49338 . + 0 ID=cds-WP_014722362.1;Parent=gene-LDO50_RS01395;Dbxref=GenBank:WP_014722362.1;Name=WP_014722362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758496.1;locus_tag=LDO50_RS01395;product=isochorismatase family protein;protein_id=WP_014722362.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 49335 49958 . + . ID=gene-LDO50_RS01400;Name=LDO50_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01400;old_locus_tag=BVI1335_1040051 NZ_CAJZAO010000007.1 Protein Homology CDS 49335 49958 . + 0 ID=cds-WP_224019319.1;Parent=gene-LDO50_RS01400;Dbxref=GenBank:WP_224019319.1;Name=WP_224019319.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883140.1;locus_tag=LDO50_RS01400;product=HAD family hydrolase;protein_id=WP_224019319.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 50090 51757 . - . ID=gene-LDO50_RS01405;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=LDO50_RS01405;old_locus_tag=BVI1335_1040052 NZ_CAJZAO010000007.1 Protein Homology CDS 50090 51757 . - 0 ID=cds-WP_014722364.1;Parent=gene-LDO50_RS01405;Dbxref=GenBank:WP_014722364.1;Name=WP_014722364.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186903.1;locus_tag=LDO50_RS01405;product=energy-dependent translational throttle protein EttA;protein_id=WP_014722364.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 51945 52253 . - . ID=gene-LDO50_RS01410;Name=LDO50_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01410;old_locus_tag=BVI1335_1040054 NZ_CAJZAO010000007.1 Protein Homology CDS 51945 52253 . - 0 ID=cds-WP_045578559.1;Parent=gene-LDO50_RS01410;Dbxref=GenBank:WP_045578559.1;Name=WP_045578559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494399.1;locus_tag=LDO50_RS01410;product=DUF3761 domain-containing protein;protein_id=WP_045578559.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 52827 54218 . + . ID=gene-LDO50_RS01415;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=LDO50_RS01415;old_locus_tag=BVI1335_1040055 NZ_CAJZAO010000007.1 Protein Homology CDS 52827 54218 . + 0 ID=cds-WP_034193975.1;Parent=gene-LDO50_RS01415;Dbxref=GenBank:WP_034193975.1;Name=WP_034193975.1;Ontology_term=GO:0015812,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=gamma-aminobutyric acid transport|0015812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477053.1;locus_tag=LDO50_RS01415;product=GABA permease;protein_id=WP_034193975.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 54370 55464 . - . ID=gene-LDO50_RS01420;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=LDO50_RS01420;old_locus_tag=BVI1335_1040056 NZ_CAJZAO010000007.1 Protein Homology CDS 54370 55464 . - 0 ID=cds-WP_212173779.1;Parent=gene-LDO50_RS01420;Dbxref=GenBank:WP_212173779.1;Name=WP_212173779.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477050.1;locus_tag=LDO50_RS01420;product=redox-regulated ATPase YchF;protein_id=WP_212173779.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 55713 56891 . + . ID=gene-LDO50_RS01425;Name=LDO50_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01425;old_locus_tag=BVI1335_1040057 NZ_CAJZAO010000007.1 Protein Homology CDS 55713 56891 . + 0 ID=cds-WP_011883145.1;Parent=gene-LDO50_RS01425;Dbxref=GenBank:WP_011883145.1;Name=WP_011883145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214205.1;locus_tag=LDO50_RS01425;product=UbiH/UbiF family hydroxylase;protein_id=WP_011883145.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 56982 57710 . + . ID=gene-LDO50_RS01430;Name=LDO50_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01430;old_locus_tag=BVI1335_1040058 NZ_CAJZAO010000007.1 Protein Homology CDS 56982 57710 . + 0 ID=cds-WP_034193974.1;Parent=gene-LDO50_RS01430;Dbxref=GenBank:WP_034193974.1;Name=WP_034193974.1;Ontology_term=GO:0003756;gbkey=CDS;go_function=protein disulfide isomerase activity|0003756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758486.1;locus_tag=LDO50_RS01430;product=DsbC family protein;protein_id=WP_034193974.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 57837 58422 . + . ID=gene-LDO50_RS31195;Name=LDO50_RS31195;end_range=58422,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31195;old_locus_tag=BVI1335_1040059;partial=true NZ_CAJZAO010000007.1 Protein Homology CDS 57837 58422 . + 0 ID=cds-WP_443797695.1;Parent=gene-LDO50_RS31195;Dbxref=GenBank:WP_443797695.1;Name=WP_443797695.1;end_range=58422,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350810.1;locus_tag=LDO50_RS31195;partial=true;product=M61 family metallopeptidase;protein_id=WP_443797695.1;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 58433 58805 . + . ID=gene-LDO50_RS31200;Name=LDO50_RS31200;end_range=58805,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31200;old_locus_tag=BVI1335_1040060;partial=true;start_range=.,58433 NZ_CAJZAO010000007.1 Protein Homology CDS 58433 58805 . + 1 ID=cds-WP_443797696.1;Parent=gene-LDO50_RS31200;Dbxref=GenBank:WP_443797696.1;Name=WP_443797696.1;end_range=58805,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004555453.1;locus_tag=LDO50_RS31200;partial=true;product=M61 family metallopeptidase;protein_id=WP_443797696.1;start_range=.,58433;transl_table=11 NZ_CAJZAO010000007.1 RefSeq gene 58816 59119 . + . ID=gene-LDO50_RS31025;Name=LDO50_RS31025;end_range=59119,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31025;partial=true;start_range=.,58816 NZ_CAJZAO010000007.1 Protein Homology CDS 58816 59119 . + 0 ID=cds-WP_443797697.1;Parent=gene-LDO50_RS31025;Dbxref=GenBank:WP_443797697.1;Name=WP_443797697.1;end_range=59119,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350810.1;locus_tag=LDO50_RS31025;partial=true;product=M61 family metallopeptidase;protein_id=WP_443797697.1;start_range=.,58816;transl_table=11 ##sequence-region NZ_CAJZAO010000008.1 1 24053 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000008.1 RefSeq region 1 24053 . + . ID=NZ_CAJZAO010000008.1:1..24053;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_105 NZ_CAJZAO010000008.1 RefSeq gene 1 716 . + . ID=gene-LDO50_RS01440;Name=LDO50_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01440;old_locus_tag=BVI1335_1050001;partial=true;start_range=.,1 NZ_CAJZAO010000008.1 Protein Homology CDS 1 716 . + 2 ID=cds-WP_224019320.1;Parent=gene-LDO50_RS01440;Dbxref=GenBank:WP_224019320.1;Name=WP_224019320.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882705.1;locus_tag=LDO50_RS01440;partial=true;product=cytochrome P450;protein_id=WP_224019320.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000008.1 RefSeq gene 726 1052 . - . ID=gene-LDO50_RS01445;Name=LDO50_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01445;old_locus_tag=BVI1335_1050002 NZ_CAJZAO010000008.1 Protein Homology CDS 726 1052 . - 0 ID=cds-WP_011882704.1;Parent=gene-LDO50_RS01445;Dbxref=GenBank:WP_011882704.1;Name=WP_011882704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027681.1;locus_tag=LDO50_RS01445;product=superinfection immunity protein;protein_id=WP_011882704.1;transl_table=11 NZ_CAJZAO010000008.1 RefSeq gene 1154 1573 . - . ID=gene-LDO50_RS01450;Name=LDO50_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01450;old_locus_tag=BVI1335_1050003 NZ_CAJZAO010000008.1 Protein Homology CDS 1154 1573 . - 0 ID=cds-WP_041494226.1;Parent=gene-LDO50_RS01450;Dbxref=GenBank:WP_041494226.1;Name=WP_041494226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882703.1;locus_tag=LDO50_RS01450;product=rhodanese-like domain-containing protein;protein_id=WP_041494226.1;transl_table=11 NZ_CAJZAO010000008.1 RefSeq gene 1685 2659 . + . ID=gene-LDO50_RS01455;Name=ftrA;gbkey=Gene;gene=ftrA;gene_biotype=protein_coding;locus_tag=LDO50_RS01455;old_locus_tag=BVI1335_1050004 NZ_CAJZAO010000008.1 Protein Homology CDS 1685 2659 . + 0 ID=cds-WP_011882702.1;Parent=gene-LDO50_RS01455;Dbxref=GenBank:WP_011882702.1;Name=WP_011882702.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=ftrA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882702.1;locus_tag=LDO50_RS01455;product=transcriptional regulator FtrA;protein_id=WP_011882702.1;transl_table=11 NZ_CAJZAO010000008.1 RefSeq gene 2821 3555 . + . ID=gene-LDO50_RS01460;Name=LDO50_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01460;old_locus_tag=BVI1335_1050005 NZ_CAJZAO010000008.1 Protein Homology CDS 2821 3555 . + 0 ID=cds-WP_059897060.1;Parent=gene-LDO50_RS01460;Dbxref=GenBank:WP_059897060.1;Name=WP_059897060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758161.1;locus_tag=LDO50_RS01460;product=hypothetical protein;protein_id=WP_059897060.1;transl_table=11 NZ_CAJZAO010000008.1 RefSeq gene 3631 5970 . - . ID=gene-LDO50_RS01465;Name=LDO50_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01465;old_locus_tag=BVI1335_1050006 NZ_CAJZAO010000008.1 Protein Homology CDS 3631 5970 . - 0 ID=cds-WP_014725479.1;Parent=gene-LDO50_RS01465;Dbxref=GenBank:WP_014725479.1;Name=WP_014725479.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659330.1;locus_tag=LDO50_RS01465;product=Orn/Lys/Arg decarboxylase N-terminal domain-containing protein;protein_id=WP_014725479.1;transl_table=11 NZ_CAJZAO010000008.1 RefSeq gene 5974 7500 . - . ID=gene-LDO50_RS01470;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=LDO50_RS01470;old_locus_tag=BVI1335_1050007 NZ_CAJZAO010000008.1 Protein Homology CDS 5974 7500 . - 0 ID=cds-WP_059474701.1;Parent=gene-LDO50_RS01470;Dbxref=GenBank:WP_059474701.1;Name=WP_059474701.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366594.1;locus_tag=LDO50_RS01470;product=arginine/agmatine antiporter;protein_id=WP_059474701.1;transl_table=11 NZ_CAJZAO010000008.1 RefSeq gene 7394 7642 . + . ID=gene-LDO50_RS01475;Name=LDO50_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01475 NZ_CAJZAO010000008.1 GeneMarkS-2+ CDS 7394 7642 . + 0 ID=cds-WP_162471376.1;Parent=gene-LDO50_RS01475;Dbxref=GenBank:WP_162471376.1;Name=WP_162471376.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS01475;product=hypothetical protein;protein_id=WP_162471376.1;transl_table=11 NZ_CAJZAO010000008.1 RefSeq gene 8001 9455 . + . ID=gene-LDO50_RS01480;Name=LDO50_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01480;old_locus_tag=BVI1335_1050008 NZ_CAJZAO010000008.1 Protein Homology CDS 8001 9455 . + 0 ID=cds-WP_011882698.1;Parent=gene-LDO50_RS01480;Dbxref=GenBank:WP_011882698.1;Name=WP_011882698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757485.1;locus_tag=LDO50_RS01480;product=M20 family metallopeptidase;protein_id=WP_011882698.1;transl_table=11 NZ_CAJZAO010000008.1 RefSeq gene 9511 10620 . + . ID=gene-LDO50_RS01485;Name=LDO50_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01485;old_locus_tag=BVI1335_1050010 NZ_CAJZAO010000008.1 Protein Homology CDS 9511 10620 . + 0 ID=cds-WP_045577778.1;Parent=gene-LDO50_RS01485;Dbxref=GenBank:WP_045577778.1;Name=WP_045577778.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547244.1;locus_tag=LDO50_RS01485;product=malate/lactate/ureidoglycolate dehydrogenase;protein_id=WP_045577778.1;transl_table=11 NZ_CAJZAO010000008.1 RefSeq gene 10700 11143 . + . ID=gene-LDO50_RS01490;Name=LDO50_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01490;old_locus_tag=BVI1335_1050011 NZ_CAJZAO010000008.1 Protein Homology CDS 10700 11143 . + 0 ID=cds-WP_224019321.1;Parent=gene-LDO50_RS01490;Dbxref=GenBank:WP_224019321.1;Name=WP_224019321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490858.1;locus_tag=LDO50_RS01490;product=TfoX/Sxy family protein;protein_id=WP_224019321.1;transl_table=11 NZ_CAJZAO010000008.1 RefSeq gene 11526 12104 . + . ID=gene-LDO50_RS01495;Name=LDO50_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01495;old_locus_tag=BVI1335_1050012 NZ_CAJZAO010000008.1 Protein Homology CDS 11526 12104 . + 0 ID=cds-WP_011882695.1;Parent=gene-LDO50_RS01495;Dbxref=GenBank:WP_011882695.1;Name=WP_011882695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354393.1;locus_tag=LDO50_RS01495;product=NnrU family protein;protein_id=WP_011882695.1;transl_table=11 NZ_CAJZAO010000008.1 RefSeq gene 12311 13048 . - . ID=gene-LDO50_RS01500;Name=LDO50_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01500;old_locus_tag=BVI1335_1050013 NZ_CAJZAO010000008.1 Protein Homology CDS 12311 13048 . - 0 ID=cds-WP_011882694.1;Parent=gene-LDO50_RS01500;Dbxref=GenBank:WP_011882694.1;Name=WP_011882694.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490854.1;locus_tag=LDO50_RS01500;product=sulfite exporter TauE/SafE family protein;protein_id=WP_011882694.1;transl_table=11 NZ_CAJZAO010000008.1 RefSeq gene 13298 13873 . - . ID=gene-LDO50_RS01505;Name=LDO50_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01505;old_locus_tag=BVI1335_1050015 NZ_CAJZAO010000008.1 Protein Homology CDS 13298 13873 . - 0 ID=cds-WP_060042542.1;Parent=gene-LDO50_RS01505;Dbxref=GenBank:WP_060042542.1;Name=WP_060042542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548547.1;locus_tag=LDO50_RS01505;product=DUF488 domain-containing protein;protein_id=WP_060042542.1;transl_table=11 NZ_CAJZAO010000008.1 RefSeq gene 13870 14097 . - . ID=gene-LDO50_RS01510;Name=LDO50_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01510;old_locus_tag=BVI1335_1050016 NZ_CAJZAO010000008.1 Protein Homology CDS 13870 14097 . - 0 ID=cds-WP_060042543.1;Parent=gene-LDO50_RS01510;Dbxref=GenBank:WP_060042543.1;Name=WP_060042543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725472.1;locus_tag=LDO50_RS01510;product=DUF2945 domain-containing protein;protein_id=WP_060042543.1;transl_table=11 NZ_CAJZAO010000008.1 RefSeq gene 14892 15182 . + . ID=gene-LDO50_RS01515;Name=LDO50_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01515;old_locus_tag=BVI1335_1050018 NZ_CAJZAO010000008.1 Protein Homology CDS 14892 15182 . + 0 ID=cds-WP_081054192.1;Parent=gene-LDO50_RS01515;Dbxref=GenBank:WP_081054192.1;Name=WP_081054192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548544.1;locus_tag=LDO50_RS01515;product=DUF4148 domain-containing protein;protein_id=WP_081054192.1;transl_table=11 NZ_CAJZAO010000008.1 RefSeq gene 15258 16430 . - . ID=gene-LDO50_RS01520;Name=LDO50_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01520;old_locus_tag=BVI1335_1050019 NZ_CAJZAO010000008.1 Protein Homology CDS 15258 16430 . - 0 ID=cds-WP_041494224.1;Parent=gene-LDO50_RS01520;Dbxref=GenBank:WP_041494224.1;Name=WP_041494224.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548543.1;locus_tag=LDO50_RS01520;product=porin;protein_id=WP_041494224.1;transl_table=11 NZ_CAJZAO010000008.1 RefSeq gene 16505 17854 . - . ID=gene-LDO50_RS01525;Name=LDO50_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01525;old_locus_tag=BVI1335_1050020 NZ_CAJZAO010000008.1 Protein Homology CDS 16505 17854 . - 0 ID=cds-WP_060042545.1;Parent=gene-LDO50_RS01525;Dbxref=GenBank:WP_060042545.1;Name=WP_060042545.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882689.1;locus_tag=LDO50_RS01525;product=MFS transporter;protein_id=WP_060042545.1;transl_table=11 NZ_CAJZAO010000008.1 RefSeq gene 18563 19540 . + . ID=gene-LDO50_RS01530;Name=LDO50_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01530;old_locus_tag=BVI1335_1050021 NZ_CAJZAO010000008.1 Protein Homology CDS 18563 19540 . + 0 ID=cds-WP_011548540.1;Parent=gene-LDO50_RS01530;Dbxref=GenBank:WP_011548540.1;Name=WP_011548540.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548540.1;locus_tag=LDO50_RS01530;product=AraC family transcriptional regulator;protein_id=WP_011548540.1;transl_table=11 NZ_CAJZAO010000008.1 RefSeq gene 19756 22470 . + . ID=gene-LDO50_RS01535;Name=mdeB;gbkey=Gene;gene=mdeB;gene_biotype=protein_coding;locus_tag=LDO50_RS01535;old_locus_tag=BVI1335_1050022 NZ_CAJZAO010000008.1 Protein Homology CDS 19756 22470 . + 0 ID=cds-WP_060042547.1;Parent=gene-LDO50_RS01535;Dbxref=GenBank:WP_060042547.1;Name=WP_060042547.1;Ontology_term=GO:0016491;gbkey=CDS;gene=mdeB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882686.1;locus_tag=LDO50_RS01535;product=alpha-ketoglutarate dehydrogenase;protein_id=WP_060042547.1;transl_table=11 NZ_CAJZAO010000008.1 RefSeq gene 22633 23588 . + . ID=gene-LDO50_RS01540;Name=LDO50_RS01540;end_range=23588,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01540;old_locus_tag=BVI1335_1050023;partial=true NZ_CAJZAO010000008.1 Protein Homology CDS 22633 23588 . + 0 ID=cds-WP_443797698.1;Parent=gene-LDO50_RS01540;Dbxref=GenBank:WP_443797698.1;Name=WP_443797698.1;Ontology_term=GO:0016746;end_range=23588,.;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882685.1;locus_tag=LDO50_RS01540;partial=true;product=2-oxo acid dehydrogenase subunit E2;protein_id=WP_443797698.1;transl_table=11 NZ_CAJZAO010000008.1 RefSeq gene 23799 24053 . + . ID=gene-LDO50_RS01545;Name=LDO50_RS01545;end_range=24053,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01545;partial=true NZ_CAJZAO010000008.1 Protein Homology CDS 23799 24053 . + 0 ID=cds-WP_224019322.1;Parent=gene-LDO50_RS01545;Dbxref=GenBank:WP_224019322.1;Name=WP_224019322.1;end_range=24053,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213072.1;locus_tag=LDO50_RS01545;partial=true;product=biotin/lipoyl-containing protein;protein_id=WP_224019322.1;transl_table=11 ##sequence-region NZ_CAJZAO010000009.1 1 45569 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000009.1 RefSeq region 1 45569 . + . ID=NZ_CAJZAO010000009.1:1..45569;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_106 NZ_CAJZAO010000009.1 RefSeq gene 1 967 . - . ID=gene-LDO50_RS01550;Name=LDO50_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01550;partial=true;start_range=.,1 NZ_CAJZAO010000009.1 Protein Homology CDS 1 967 . - 0 ID=cds-WP_224019326.1;Parent=gene-LDO50_RS01550;Dbxref=GenBank:WP_224019326.1;Name=WP_224019326.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754236.1;locus_tag=LDO50_RS01550;partial=true;product=ABC transporter permease;protein_id=WP_224019326.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 1075 1692 . - . ID=gene-LDO50_RS01555;Name=LDO50_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01555;old_locus_tag=BVI1335_1060002 NZ_CAJZAO010000009.1 Protein Homology CDS 1075 1692 . - 0 ID=cds-WP_011885563.1;Parent=gene-LDO50_RS01555;Dbxref=GenBank:WP_011885563.1;Name=WP_011885563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009980272.1;locus_tag=LDO50_RS01555;product=DUF4126 domain-containing protein;protein_id=WP_011885563.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 1918 2238 . - . ID=gene-LDO50_RS01560;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=LDO50_RS01560;old_locus_tag=BVI1335_1060003 NZ_CAJZAO010000009.1 Protein Homology CDS 1918 2238 . - 0 ID=cds-WP_011885564.1;Parent=gene-LDO50_RS01560;Dbxref=GenBank:WP_011885564.1;Name=WP_011885564.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896472.1;locus_tag=LDO50_RS01560;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_011885564.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 2442 2720 . - . ID=gene-LDO50_RS01565;Name=LDO50_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01565;old_locus_tag=BVI1335_1060004 NZ_CAJZAO010000009.1 Protein Homology CDS 2442 2720 . - 0 ID=cds-WP_011885565.1;Parent=gene-LDO50_RS01565;Dbxref=GenBank:WP_011885565.1;Name=WP_011885565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483516.1;locus_tag=LDO50_RS01565;product=putative hemolysin;protein_id=WP_011885565.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 2820 3518 . - . ID=gene-LDO50_RS01570;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=LDO50_RS01570;old_locus_tag=BVI1335_1060005 NZ_CAJZAO010000009.1 Protein Homology CDS 2820 3518 . - 0 ID=cds-WP_011885566.1;Parent=gene-LDO50_RS01570;Dbxref=GenBank:WP_011885566.1;Name=WP_011885566.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752204.1;locus_tag=LDO50_RS01570;product=two-component system response regulator KdpE;protein_id=WP_011885566.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 3511 6567 . - . ID=gene-LDO50_RS01575;Name=LDO50_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01575;old_locus_tag=BVI1335_1060006 NZ_CAJZAO010000009.1 Protein Homology CDS 3511 6567 . - 0 ID=cds-WP_224019324.1;Parent=gene-LDO50_RS01575;Dbxref=GenBank:WP_224019324.1;Name=WP_224019324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885567.1;locus_tag=LDO50_RS01575;product=sensor histidine kinase;protein_id=WP_224019324.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 6791 7372 . - . ID=gene-LDO50_RS01580;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=LDO50_RS01580;old_locus_tag=BVI1335_1060007 NZ_CAJZAO010000009.1 Protein Homology CDS 6791 7372 . - 0 ID=cds-WP_014723380.1;Parent=gene-LDO50_RS01580;Dbxref=GenBank:WP_014723380.1;Name=WP_014723380.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102455.1;locus_tag=LDO50_RS01580;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_014723380.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 7398 9482 . - . ID=gene-LDO50_RS01585;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=LDO50_RS01585;old_locus_tag=BVI1335_1060008 NZ_CAJZAO010000009.1 Protein Homology CDS 7398 9482 . - 0 ID=cds-WP_041493868.1;Parent=gene-LDO50_RS01585;Dbxref=GenBank:WP_041493868.1;Name=WP_041493868.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352735.1;locus_tag=LDO50_RS01585;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_041493868.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 9535 11340 . - . ID=gene-LDO50_RS01590;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=LDO50_RS01590;old_locus_tag=BVI1335_1060009 NZ_CAJZAO010000009.1 Protein Homology CDS 9535 11340 . - 0 ID=cds-WP_034194054.1;Parent=gene-LDO50_RS01590;Dbxref=GenBank:WP_034194054.1;Name=WP_034194054.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352736.1;locus_tag=LDO50_RS01590;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_034194054.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 11337 11429 . - . ID=gene-LDO50_RS01595;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=LDO50_RS01595 NZ_CAJZAO010000009.1 Protein Homology CDS 11337 11429 . - 0 ID=cds-WP_006752209.1;Parent=gene-LDO50_RS01595;Dbxref=GenBank:WP_006752209.1;Name=WP_006752209.1;Ontology_term=GO:0006813,GO:0043462,GO:0031004;gbkey=CDS;gene=kdpF;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_process=potassium ion transport|0006813||IEA,regulation of ATP-dependent activity|0043462||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331558.1;locus_tag=LDO50_RS01595;product=K(+)-transporting ATPase subunit F;protein_id=WP_006752209.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 11786 12760 . - . ID=gene-LDO50_RS01600;Name=LDO50_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01600;old_locus_tag=BVI1335_1060011 NZ_CAJZAO010000009.1 Protein Homology CDS 11786 12760 . - 0 ID=cds-WP_046424383.1;Parent=gene-LDO50_RS01600;Dbxref=GenBank:WP_046424383.1;Name=WP_046424383.1;Ontology_term=GO:0003960,GO:0070402;gbkey=CDS;go_function=quinone reductase (NADPH) activity|0003960||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405597.1;locus_tag=LDO50_RS01600;product=quinone oxidoreductase family protein;protein_id=WP_046424383.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 12955 13347 . - . ID=gene-LDO50_RS01605;Name=LDO50_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01605;old_locus_tag=BVI1335_1060012 NZ_CAJZAO010000009.1 Protein Homology CDS 12955 13347 . - 0 ID=cds-WP_014723386.1;Parent=gene-LDO50_RS01605;Dbxref=GenBank:WP_014723386.1;Name=WP_014723386.1;Ontology_term=GO:0019242,GO:0008929;gbkey=CDS;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752212.1;locus_tag=LDO50_RS01605;product=methylglyoxal synthase;protein_id=WP_014723386.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 13400 14179 . - . ID=gene-LDO50_RS01610;Name=LDO50_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01610;old_locus_tag=BVI1335_1060013 NZ_CAJZAO010000009.1 Protein Homology CDS 13400 14179 . - 0 ID=cds-WP_041493976.1;Parent=gene-LDO50_RS01610;Dbxref=GenBank:WP_041493976.1;Name=WP_041493976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892270.1;locus_tag=LDO50_RS01610;product=SDR family oxidoreductase;protein_id=WP_041493976.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 14407 15057 . + . ID=gene-LDO50_RS01615;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=LDO50_RS01615;old_locus_tag=BVI1335_1060014 NZ_CAJZAO010000009.1 Protein Homology CDS 14407 15057 . + 0 ID=cds-WP_011885574.1;Parent=gene-LDO50_RS01615;Dbxref=GenBank:WP_011885574.1;Name=WP_011885574.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091140.1;locus_tag=LDO50_RS01615;product=uracil phosphoribosyltransferase;protein_id=WP_011885574.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 15261 15989 . + . ID=gene-LDO50_RS01620;Name=LDO50_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01620;old_locus_tag=BVI1335_1060015 NZ_CAJZAO010000009.1 Protein Homology CDS 15261 15989 . + 0 ID=cds-WP_059461278.1;Parent=gene-LDO50_RS01620;Dbxref=GenBank:WP_059461278.1;Name=WP_059461278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091139.1;locus_tag=LDO50_RS01620;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_059461278.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 16095 17372 . + . ID=gene-LDO50_RS01625;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=LDO50_RS01625;old_locus_tag=BVI1335_1060016 NZ_CAJZAO010000009.1 Protein Homology CDS 16095 17372 . + 0 ID=cds-WP_011885576.1;Parent=gene-LDO50_RS01625;Dbxref=GenBank:WP_011885576.1;Name=WP_011885576.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657519.1;locus_tag=LDO50_RS01625;product=phosphoribosylamine--glycine ligase;protein_id=WP_011885576.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 17491 18411 . + . ID=gene-LDO50_RS01630;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=LDO50_RS01630;old_locus_tag=BVI1335_1060017 NZ_CAJZAO010000009.1 Protein Homology CDS 17491 18411 . + 0 ID=cds-WP_014723389.1;Parent=gene-LDO50_RS01630;Dbxref=GenBank:WP_014723389.1;Name=WP_014723389.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405601.1;locus_tag=LDO50_RS01630;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_014723389.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 18505 19161 . + . ID=gene-LDO50_RS01635;Name=LDO50_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01635;old_locus_tag=BVI1335_1060018 NZ_CAJZAO010000009.1 Protein Homology CDS 18505 19161 . + 0 ID=cds-WP_230681357.1;Parent=gene-LDO50_RS01635;Dbxref=GenBank:WP_230681357.1;Name=WP_230681357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352744.1;locus_tag=LDO50_RS01635;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_230681357.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 19166 19612 . + . ID=gene-LDO50_RS01640;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=LDO50_RS01640;old_locus_tag=BVI1335_1060019 NZ_CAJZAO010000009.1 Protein Homology CDS 19166 19612 . + 0 ID=cds-WP_011885579.1;Parent=gene-LDO50_RS01640;Dbxref=GenBank:WP_011885579.1;Name=WP_011885579.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398740.1;locus_tag=LDO50_RS01640;product=ribosome silencing factor;protein_id=WP_011885579.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 19632 20102 . + . ID=gene-LDO50_RS01645;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=LDO50_RS01645;old_locus_tag=BVI1335_1060020 NZ_CAJZAO010000009.1 Protein Homology CDS 19632 20102 . + 0 ID=cds-WP_011885580.1;Parent=gene-LDO50_RS01645;Dbxref=GenBank:WP_011885580.1;Name=WP_011885580.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352746.1;locus_tag=LDO50_RS01645;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_011885580.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 20154 20786 . + . ID=gene-LDO50_RS01650;Name=LDO50_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01650;old_locus_tag=BVI1335_1060021 NZ_CAJZAO010000009.1 Protein Homology CDS 20154 20786 . + 0 ID=cds-WP_011885581.1;Parent=gene-LDO50_RS01650;Dbxref=GenBank:WP_011885581.1;Name=WP_011885581.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352747.1;locus_tag=LDO50_RS01650;product=Maf family protein;protein_id=WP_011885581.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 20795 22264 . + . ID=gene-LDO50_RS01655;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=LDO50_RS01655;old_locus_tag=BVI1335_1060022 NZ_CAJZAO010000009.1 Protein Homology CDS 20795 22264 . + 0 ID=cds-WP_011885582.1;Parent=gene-LDO50_RS01655;Dbxref=GenBank:WP_011885582.1;Name=WP_011885582.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545847.1;locus_tag=LDO50_RS01655;product=ribonuclease G;protein_id=WP_011885582.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 22310 22924 . - . ID=gene-LDO50_RS01660;Name=LDO50_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01660;old_locus_tag=BVI1335_1060024 NZ_CAJZAO010000009.1 Protein Homology CDS 22310 22924 . - 0 ID=cds-WP_034194050.1;Parent=gene-LDO50_RS01660;Dbxref=GenBank:WP_034194050.1;Name=WP_034194050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885583.1;locus_tag=LDO50_RS01660;product=pentapeptide repeat-containing protein;protein_id=WP_034194050.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 22932 23540 . + . ID=gene-LDO50_RS01665;Name=LDO50_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01665;old_locus_tag=BVI1335_1060025 NZ_CAJZAO010000009.1 Protein Homology CDS 22932 23540 . + 0 ID=cds-WP_175898939.1;Parent=gene-LDO50_RS01665;Dbxref=GenBank:WP_175898939.1;Name=WP_175898939.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: protein motif:HMM:NF017315.6;locus_tag=LDO50_RS01665;product=PAAR domain-containing protein;protein_id=WP_175898939.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 23649 24320 . + . ID=gene-LDO50_RS01670;Name=LDO50_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01670;old_locus_tag=BVI1335_1060027 NZ_CAJZAO010000009.1 Protein Homology CDS 23649 24320 . + 0 ID=cds-WP_034194049.1;Parent=gene-LDO50_RS01670;Dbxref=GenBank:WP_034194049.1;Name=WP_034194049.1;Ontology_term=GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885585.1;locus_tag=LDO50_RS01670;product=M35 family metallo-endopeptidase;protein_id=WP_034194049.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 24313 24723 . + . ID=gene-LDO50_RS01675;Name=LDO50_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01675 NZ_CAJZAO010000009.1 Protein Homology CDS 24313 24723 . + 0 ID=cds-WP_011885586.1;Parent=gene-LDO50_RS01675;Dbxref=GenBank:WP_011885586.1;Name=WP_011885586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885586.1;locus_tag=LDO50_RS01675;product=hypothetical protein;protein_id=WP_011885586.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 24990 25325 . + . ID=gene-LDO50_RS01680;Name=LDO50_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01680;old_locus_tag=BVI1335_1060029 NZ_CAJZAO010000009.1 Protein Homology CDS 24990 25325 . + 0 ID=cds-WP_011885587.1;Parent=gene-LDO50_RS01680;Dbxref=GenBank:WP_011885587.1;Name=WP_011885587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478219.1;locus_tag=LDO50_RS01680;product=YggL family protein;protein_id=WP_011885587.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 25593 26555 . + . ID=gene-LDO50_RS01685;Name=LDO50_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01685;old_locus_tag=BVI1335_1060031 NZ_CAJZAO010000009.1 Protein Homology CDS 25593 26555 . + 0 ID=cds-WP_045578912.1;Parent=gene-LDO50_RS01685;Dbxref=GenBank:WP_045578912.1;Name=WP_045578912.1;Ontology_term=GO:0019684,GO:0009055;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;go_process=photosynthesis%2C light reaction|0019684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415303.1;locus_tag=LDO50_RS01685;product=PRC-barrel domain-containing protein;protein_id=WP_045578912.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 26552 27820 . + . ID=gene-LDO50_RS01690;Name=LDO50_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01690;old_locus_tag=BVI1335_1060032 NZ_CAJZAO010000009.1 Protein Homology CDS 26552 27820 . + 0 ID=cds-WP_059668663.1;Parent=gene-LDO50_RS01690;Dbxref=GenBank:WP_059668663.1;Name=WP_059668663.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761058.1;locus_tag=LDO50_RS01690;product=MFS transporter;protein_id=WP_059668663.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 27858 28421 . + . ID=gene-LDO50_RS01695;Name=LDO50_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01695;old_locus_tag=BVI1335_1060033 NZ_CAJZAO010000009.1 Protein Homology CDS 27858 28421 . + 0 ID=cds-WP_011885590.1;Parent=gene-LDO50_RS01695;Dbxref=GenBank:WP_011885590.1;Name=WP_011885590.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723395.1;locus_tag=LDO50_RS01695;product=FUSC family protein;protein_id=WP_011885590.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 28496 28888 . - . ID=gene-LDO50_RS01700;Name=LDO50_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01700;old_locus_tag=BVI1335_1060034 NZ_CAJZAO010000009.1 Protein Homology CDS 28496 28888 . - 0 ID=cds-WP_034194046.1;Parent=gene-LDO50_RS01700;Dbxref=GenBank:WP_034194046.1;Name=WP_034194046.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545850.1;locus_tag=LDO50_RS01700;product=RcnB family protein;protein_id=WP_034194046.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 28990 30741 . - . ID=gene-LDO50_RS01705;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=LDO50_RS01705;old_locus_tag=BVI1335_1060035 NZ_CAJZAO010000009.1 Protein Homology CDS 28990 30741 . - 0 ID=cds-WP_034194045.1;Parent=gene-LDO50_RS01705;Dbxref=GenBank:WP_034194045.1;Name=WP_034194045.1;Ontology_term=GO:0006869,GO:0005319,GO:0005524,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=lipid transporter activity|0005319||IEA,ATP binding|0005524||IEA;go_process=lipid transport|0006869||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896445.1;locus_tag=LDO50_RS01705;product=lipid A export permease/ATP-binding protein MsbA;protein_id=WP_034194045.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 30949 31701 . + . ID=gene-LDO50_RS01710;Name=LDO50_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01710;old_locus_tag=BVI1335_1060037 NZ_CAJZAO010000009.1 Protein Homology CDS 30949 31701 . + 0 ID=cds-WP_011885593.1;Parent=gene-LDO50_RS01710;Dbxref=GenBank:WP_011885593.1;Name=WP_011885593.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364356.1;locus_tag=LDO50_RS01710;product=glycosyltransferase family 2 protein;protein_id=WP_011885593.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 31838 32680 . + . ID=gene-LDO50_RS01715;Name=LDO50_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01715;old_locus_tag=BVI1335_1060038 NZ_CAJZAO010000009.1 Protein Homology CDS 31838 32680 . + 0 ID=cds-WP_011885594.1;Parent=gene-LDO50_RS01715;Dbxref=GenBank:WP_011885594.1;Name=WP_011885594.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409051.1;locus_tag=LDO50_RS01715;product=glycosyltransferase family 2 protein;protein_id=WP_011885594.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 32812 34095 . + . ID=gene-LDO50_RS01720;Name=LDO50_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01720;old_locus_tag=BVI1335_1060039 NZ_CAJZAO010000009.1 Protein Homology CDS 32812 34095 . + 0 ID=cds-WP_011885595.1;Parent=gene-LDO50_RS01720;Dbxref=GenBank:WP_011885595.1;Name=WP_011885595.1;Ontology_term=GO:0009103,GO:0008754,GO:0008755,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=O-antigen ligase activity|0008754||IEA,O antigen polymerase activity|0008755||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657533.1;locus_tag=LDO50_RS01720;product=O-antigen ligase family protein;protein_id=WP_011885595.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 34219 35397 . - . ID=gene-LDO50_RS01725;Name=LDO50_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01725;old_locus_tag=BVI1335_1060041 NZ_CAJZAO010000009.1 Protein Homology CDS 34219 35397 . - 0 ID=cds-WP_043291396.1;Parent=gene-LDO50_RS01725;Dbxref=GenBank:WP_043291396.1;Name=WP_043291396.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328936.1;locus_tag=LDO50_RS01725;product=glycosyltransferase family 9 protein;protein_id=WP_043291396.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 35681 36769 . - . ID=gene-LDO50_RS01730;Name=LDO50_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01730;old_locus_tag=BVI1335_1060042 NZ_CAJZAO010000009.1 Protein Homology CDS 35681 36769 . - 0 ID=cds-WP_046424404.1;Parent=gene-LDO50_RS01730;Dbxref=GenBank:WP_046424404.1;Name=WP_046424404.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478209.1;locus_tag=LDO50_RS01730;product=glycosyltransferase family 9 protein;protein_id=WP_046424404.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 36999 40532 . - . ID=gene-LDO50_RS01735;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=LDO50_RS01735;old_locus_tag=BVI1335_1060043 NZ_CAJZAO010000009.1 Protein Homology CDS 36999 40532 . - 0 ID=cds-WP_224019325.1;Parent=gene-LDO50_RS01735;Dbxref=GenBank:WP_224019325.1;Name=WP_224019325.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892329.1;locus_tag=LDO50_RS01735;product=DNA polymerase III subunit alpha;protein_id=WP_224019325.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 40757 41611 . + . ID=gene-LDO50_RS01740;Name=LDO50_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01740;old_locus_tag=BVI1335_1060044 NZ_CAJZAO010000009.1 Protein Homology CDS 40757 41611 . + 0 ID=cds-WP_034194039.1;Parent=gene-LDO50_RS01740;Dbxref=GenBank:WP_034194039.1;Name=WP_034194039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758622.1;locus_tag=LDO50_RS01740;product=sulfurtransferase;protein_id=WP_034194039.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 41634 42527 . + . ID=gene-LDO50_RS01745;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=LDO50_RS01745;old_locus_tag=BVI1335_1060045 NZ_CAJZAO010000009.1 Protein Homology CDS 41634 42527 . + 0 ID=cds-WP_011885600.1;Parent=gene-LDO50_RS01745;Dbxref=GenBank:WP_011885600.1;Name=WP_011885600.1;Ontology_term=GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723401.1;locus_tag=LDO50_RS01745;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_011885600.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 42844 44382 . - . ID=gene-LDO50_RS01750;Name=LDO50_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01750;old_locus_tag=BVI1335_1060046 NZ_CAJZAO010000009.1 Protein Homology CDS 42844 44382 . - 0 ID=cds-WP_011885601.1;Parent=gene-LDO50_RS01750;Dbxref=GenBank:WP_011885601.1;Name=WP_011885601.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545860.1;locus_tag=LDO50_RS01750;product=DEAD/DEAH box helicase;protein_id=WP_011885601.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 44925 45317 . - . ID=gene-LDO50_RS01755;Name=LDO50_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01755;old_locus_tag=BVI1335_1060047 NZ_CAJZAO010000009.1 Protein Homology CDS 44925 45317 . - 0 ID=cds-WP_011885602.1;Parent=gene-LDO50_RS01755;Dbxref=GenBank:WP_011885602.1;Name=WP_011885602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415292.1;locus_tag=LDO50_RS01755;product=MliC family protein;protein_id=WP_011885602.1;transl_table=11 NZ_CAJZAO010000009.1 RefSeq gene 45404 45568 . - . ID=gene-LDO50_RS30955;Name=LDO50_RS30955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30955 NZ_CAJZAO010000009.1 Protein Homology CDS 45404 45568 . - 0 ID=cds-WP_308117481.1;Parent=gene-LDO50_RS30955;Dbxref=GenBank:WP_308117481.1;Name=WP_308117481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545862.1;locus_tag=LDO50_RS30955;product=DUF6726 family protein;protein_id=WP_308117481.1;transl_table=11 ##sequence-region NZ_CAJZAO010000010.1 1 5864 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000010.1 RefSeq region 1 5864 . + . ID=NZ_CAJZAO010000010.1:1..5864;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_107 NZ_CAJZAO010000010.1 RefSeq pseudogene 1 558 . - . ID=gene-LDO50_RS01760;Name=LDO50_RS01760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS01760;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000010.1 Protein Homology CDS 1 558 . - 0 ID=cds-LDO50_RS01760;Parent=gene-LDO50_RS01760;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328857.1;locus_tag=LDO50_RS01760;partial=true;product=acetyltransferase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000010.1 RefSeq gene 1036 2085 . + . ID=gene-LDO50_RS01765;Name=LDO50_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01765;old_locus_tag=BVI1335_1070003 NZ_CAJZAO010000010.1 Protein Homology CDS 1036 2085 . + 0 ID=cds-WP_224019327.1;Parent=gene-LDO50_RS01765;Dbxref=GenBank:WP_224019327.1;Name=WP_224019327.1;Ontology_term=GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407949.1;locus_tag=LDO50_RS01765;product=lactonase family protein;protein_id=WP_224019327.1;transl_table=11 NZ_CAJZAO010000010.1 RefSeq gene 2123 3160 . - . ID=gene-LDO50_RS01770;Name=LDO50_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01770;old_locus_tag=BVI1335_1070004 NZ_CAJZAO010000010.1 Protein Homology CDS 2123 3160 . - 0 ID=cds-WP_224019329.1;Parent=gene-LDO50_RS01770;Dbxref=GenBank:WP_224019329.1;Name=WP_224019329.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896560.1;locus_tag=LDO50_RS01770;product=AraC family transcriptional regulator;protein_id=WP_224019329.1;transl_table=11 NZ_CAJZAO010000010.1 RefSeq gene 3401 4513 . + . ID=gene-LDO50_RS01775;Name=LDO50_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01775;old_locus_tag=BVI1335_1070005 NZ_CAJZAO010000010.1 Protein Homology CDS 3401 4513 . + 0 ID=cds-WP_224019330.1;Parent=gene-LDO50_RS01775;Dbxref=GenBank:WP_224019330.1;Name=WP_224019330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694329.1;locus_tag=LDO50_RS01775;product=fatty acid desaturase;protein_id=WP_224019330.1;transl_table=11 NZ_CAJZAO010000010.1 RefSeq gene 4535 5155 . - . ID=gene-LDO50_RS01780;Name=LDO50_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01780;old_locus_tag=BVI1335_1070006 NZ_CAJZAO010000010.1 Protein Homology CDS 4535 5155 . - 0 ID=cds-WP_011885461.1;Parent=gene-LDO50_RS01780;Dbxref=GenBank:WP_011885461.1;Name=WP_011885461.1;Ontology_term=GO:0016311,GO:0016791,GO:0046872;gbkey=CDS;go_function=phosphatase activity|0016791||IEA,metal ion binding|0046872||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876326.1;locus_tag=LDO50_RS01780;product=HAD family hydrolase;protein_id=WP_011885461.1;transl_table=11 NZ_CAJZAO010000010.1 RefSeq pseudogene 5350 5641 . - . ID=gene-LDO50_RS31205;Name=LDO50_RS31205;end_range=5641,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31205;old_locus_tag=BVI1335_1070008;partial=true;pseudo=true NZ_CAJZAO010000010.1 Protein Homology CDS 5350 5641 . - 1 ID=cds-LDO50_RS31205;Parent=gene-LDO50_RS31205;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5641,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497779.1;locus_tag=LDO50_RS31205;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CAJZAO010000010.1 RefSeq pseudogene 5652 5864 . - . ID=gene-LDO50_RS31210;Name=LDO50_RS31210;end_range=5864,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31210;old_locus_tag=BVI1335_1070009;partial=true;pseudo=true;start_range=.,5652 NZ_CAJZAO010000010.1 Protein Homology CDS 5652 5864 . - 2 ID=cds-LDO50_RS31210;Parent=gene-LDO50_RS31210;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=5864,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497779.1;locus_tag=LDO50_RS31210;partial=true;product=hypothetical protein;pseudo=true;start_range=.,5652;transl_table=11 ##sequence-region NZ_CAJZAO010000011.1 1 3621 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000011.1 RefSeq region 1 3621 . + . ID=NZ_CAJZAO010000011.1:1..3621;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_108 NZ_CAJZAO010000011.1 RefSeq pseudogene 1 139 . - . ID=gene-LDO50_RS01790;Name=LDO50_RS01790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS01790;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000011.1 Protein Homology CDS 1 139 . - 0 ID=cds-LDO50_RS01790;Parent=gene-LDO50_RS01790;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495565.1;locus_tag=LDO50_RS01790;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000011.1 RefSeq gene 252 1016 . + . ID=gene-LDO50_RS01795;Name=LDO50_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01795;old_locus_tag=BVI1335_1080002 NZ_CAJZAO010000011.1 Protein Homology CDS 252 1016 . + 0 ID=cds-WP_224019332.1;Parent=gene-LDO50_RS01795;Dbxref=GenBank:WP_224019332.1;Name=WP_224019332.1;Ontology_term=GO:0015035,GO:0015036;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA,disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885120.1;locus_tag=LDO50_RS01795;product=DUF899 domain-containing protein;protein_id=WP_224019332.1;transl_table=11 NZ_CAJZAO010000011.1 RefSeq pseudogene 1032 1352 . + . ID=gene-LDO50_RS01800;Name=LDO50_RS01800;end_range=1352,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS01800;old_locus_tag=BVI1335_1080004;partial=true;pseudo=true NZ_CAJZAO010000011.1 Protein Homology CDS 1032 1352 . + 0 ID=cds-LDO50_RS01800;Parent=gene-LDO50_RS01800;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1352,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885119.1;locus_tag=LDO50_RS01800;partial=true;product=DUF2182 domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAO010000011.1 RefSeq gene 1634 3094 . + . ID=gene-LDO50_RS01805;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=LDO50_RS01805;old_locus_tag=BVI1335_1080005 NZ_CAJZAO010000011.1 Protein Homology CDS 1634 3094 . + 0 ID=cds-WP_011885118.1;Parent=gene-LDO50_RS01805;Dbxref=GenBank:WP_011885118.1;Name=WP_011885118.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065652.1;locus_tag=LDO50_RS01805;product=IMP dehydrogenase;protein_id=WP_011885118.1;transl_table=11 NZ_CAJZAO010000011.1 RefSeq pseudogene 3101 3621 . + . ID=gene-LDO50_RS01810;Name=LDO50_RS01810;end_range=3621,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS01810;partial=true;pseudo=true NZ_CAJZAO010000011.1 Protein Homology CDS 3101 3621 . + 0 ID=cds-LDO50_RS01810;Parent=gene-LDO50_RS01810;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=3621,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004539969.1;locus_tag=LDO50_RS01810;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000012.1 1 5152 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000012.1 RefSeq region 1 5152 . + . ID=NZ_CAJZAO010000012.1:1..5152;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_109 NZ_CAJZAO010000012.1 RefSeq gene 1 969 . - . ID=gene-LDO50_RS01815;Name=LDO50_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01815;partial=true;start_range=.,1 NZ_CAJZAO010000012.1 Protein Homology CDS 1 969 . - 0 ID=cds-WP_224019334.1;Parent=gene-LDO50_RS01815;Dbxref=GenBank:WP_224019334.1;Name=WP_224019334.1;Ontology_term=GO:0006465,GO:0006508,GO:0008236,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type peptidase activity|0008236||IEA;go_process=signal peptide processing|0006465||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554228.1;locus_tag=LDO50_RS01815;partial=true;product=S49 family peptidase;protein_id=WP_224019334.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000012.1 RefSeq gene 994 1401 . - . ID=gene-LDO50_RS01820;Name=LDO50_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01820;old_locus_tag=BVI1335_1090002 NZ_CAJZAO010000012.1 Protein Homology CDS 994 1401 . - 0 ID=cds-WP_011883935.1;Parent=gene-LDO50_RS01820;Dbxref=GenBank:WP_011883935.1;Name=WP_011883935.1;Ontology_term=GO:0046872,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493745.1;locus_tag=LDO50_RS01820;product=Rieske (2Fe-2S) protein;protein_id=WP_011883935.1;transl_table=11 NZ_CAJZAO010000012.1 RefSeq gene 1398 2057 . - . ID=gene-LDO50_RS01825;Name=LDO50_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01825;old_locus_tag=BVI1335_1090003 NZ_CAJZAO010000012.1 Protein Homology CDS 1398 2057 . - 0 ID=cds-WP_011883934.1;Parent=gene-LDO50_RS01825;Dbxref=GenBank:WP_011883934.1;Name=WP_011883934.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904464.1;locus_tag=LDO50_RS01825;product=HAD-IA family hydrolase;protein_id=WP_011883934.1;transl_table=11 NZ_CAJZAO010000012.1 RefSeq gene 2063 3067 . - . ID=gene-LDO50_RS01830;Name=LDO50_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01830;old_locus_tag=BVI1335_1090004 NZ_CAJZAO010000012.1 Protein Homology CDS 2063 3067 . - 0 ID=cds-WP_034194222.1;Parent=gene-LDO50_RS01830;Dbxref=GenBank:WP_034194222.1;Name=WP_034194222.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467543.1;locus_tag=LDO50_RS01830;product=RluA family pseudouridine synthase;protein_id=WP_034194222.1;transl_table=11 NZ_CAJZAO010000012.1 RefSeq gene 3793 5152 . + . ID=gene-LDO50_RS01835;Name=LDO50_RS01835;end_range=5152,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01835;partial=true NZ_CAJZAO010000012.1 Protein Homology CDS 3793 5152 . + 0 ID=cds-WP_224019335.1;Parent=gene-LDO50_RS01835;Dbxref=GenBank:WP_224019335.1;Name=WP_224019335.1;Ontology_term=GO:0006396,GO:0006397,GO:0003723,GO:0004519,GO:0004540,GO:0046872;end_range=5152,.;gbkey=CDS;go_function=RNA binding|0003723||IEA,endonuclease activity|0004519||IEA,RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=RNA processing|0006396||IEA,mRNA processing|0006397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408131.1;locus_tag=LDO50_RS01835;partial=true;product=Rne/Rng family ribonuclease;protein_id=WP_224019335.1;transl_table=11 ##sequence-region NZ_CAJZAO010000013.1 1 78983 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000013.1 RefSeq region 1 78983 . + . ID=NZ_CAJZAO010000013.1:1..78983;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_11 NZ_CAJZAO010000013.1 RefSeq gene 1 392 . - . ID=gene-LDO50_RS31215;Name=LDO50_RS31215;end_range=392,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31215;partial=true;start_range=.,1 NZ_CAJZAO010000013.1 Protein Homology CDS 1 392 . - 2 ID=cds-WP_443797699.1;Parent=gene-LDO50_RS31215;Dbxref=GenBank:WP_443797699.1;Name=WP_443797699.1;end_range=392,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725946.1;locus_tag=LDO50_RS31215;partial=true;product=hypothetical protein;protein_id=WP_443797699.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 403 2286 . - . ID=gene-LDO50_RS01840;Name=LDO50_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01840;partial=true;start_range=.,403 NZ_CAJZAO010000013.1 Protein Homology CDS 403 2286 . - 0 ID=cds-WP_443797700.1;Parent=gene-LDO50_RS01840;Dbxref=GenBank:WP_443797700.1;Name=WP_443797700.1;Ontology_term=GO:0006633,GO:0030639,GO:0034081;gbkey=CDS;go_component=polyketide synthase complex|0034081||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725946.1;locus_tag=LDO50_RS01840;partial=true;product=type I polyketide synthase;protein_id=WP_443797700.1;start_range=.,403;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 2283 5615 . - . ID=gene-LDO50_RS01845;Name=LDO50_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01845;old_locus_tag=BVI1335_110003 NZ_CAJZAO010000013.1 Protein Homology CDS 2283 5615 . - 0 ID=cds-WP_059548446.1;Parent=gene-LDO50_RS01845;Dbxref=GenBank:WP_059548446.1;Name=WP_059548446.1;Ontology_term=GO:0030639,GO:0016218,GO:0016836,GO:0031177,GO:0034081;gbkey=CDS;go_component=polyketide synthase complex|0034081||IEA;go_function=polyketide synthase activity|0016218||IEA,hydro-lyase activity|0016836||IEA,phosphopantetheine binding|0031177||IEA;go_process=polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661347.1;locus_tag=LDO50_RS01845;product=type I polyketide synthase;protein_id=WP_059548446.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 5612 10024 . - . ID=gene-LDO50_RS01850;Name=LDO50_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01850;old_locus_tag=BVI1335_110004 NZ_CAJZAO010000013.1 Protein Homology CDS 5612 10024 . - 0 ID=cds-WP_224019337.1;Parent=gene-LDO50_RS01850;Dbxref=GenBank:WP_224019337.1;Name=WP_224019337.1;Ontology_term=GO:0006631,GO:0030639,GO:0016218,GO:0016836,GO:0016874,GO:0031177,GO:0034081;gbkey=CDS;go_component=polyketide synthase complex|0034081||IEA;go_function=polyketide synthase activity|0016218||IEA,hydro-lyase activity|0016836||IEA,ligase activity|0016874||IEA,phosphopantetheine binding|0031177||IEA;go_process=fatty acid metabolic process|0006631||IEA,polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759079.1;locus_tag=LDO50_RS01850;product=hybrid fatty acyl-AMP ligase/type I polyketide synthase;protein_id=WP_224019337.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 10193 11203 . - . ID=gene-LDO50_RS01855;Name=LDO50_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01855;old_locus_tag=BVI1335_110005 NZ_CAJZAO010000013.1 Protein Homology CDS 10193 11203 . - 0 ID=cds-WP_059457584.1;Parent=gene-LDO50_RS01855;Dbxref=GenBank:WP_059457584.1;Name=WP_059457584.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725943.1;locus_tag=LDO50_RS01855;product=TauD/TfdA family dioxygenase;protein_id=WP_059457584.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 11269 12579 . - . ID=gene-LDO50_RS01860;Name=LDO50_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01860;old_locus_tag=BVI1335_110006 NZ_CAJZAO010000013.1 Protein Homology CDS 11269 12579 . - 0 ID=cds-WP_224019341.1;Parent=gene-LDO50_RS01860;Dbxref=GenBank:WP_224019341.1;Name=WP_224019341.1;Ontology_term=GO:0019491,GO:0008483;gbkey=CDS;go_function=transaminase activity|0008483||IEA;go_process=ectoine biosynthetic process|0019491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759077.1;locus_tag=LDO50_RS01860;product=diaminobutyrate--2-oxoglutarate transaminase family protein;protein_id=WP_224019341.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 12787 13737 . - . ID=gene-LDO50_RS01865;Name=LDO50_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01865;old_locus_tag=BVI1335_110007 NZ_CAJZAO010000013.1 Protein Homology CDS 12787 13737 . - 0 ID=cds-WP_014725941.1;Parent=gene-LDO50_RS01865;Dbxref=GenBank:WP_014725941.1;Name=WP_014725941.1;Ontology_term=GO:0042732,GO:0048040,GO:0070403;gbkey=CDS;go_function=UDP-glucuronate decarboxylase activity|0048040||IEA,NAD+ binding|0070403||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725941.1;locus_tag=LDO50_RS01865;product=UDP-glucuronic acid decarboxylase family protein;protein_id=WP_014725941.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 13838 14548 . - . ID=gene-LDO50_RS01870;Name=LDO50_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01870;old_locus_tag=BVI1335_110008 NZ_CAJZAO010000013.1 Protein Homology CDS 13838 14548 . - 0 ID=cds-WP_224019343.1;Parent=gene-LDO50_RS01870;Dbxref=GenBank:WP_224019343.1;Name=WP_224019343.1;Ontology_term=GO:0009058;gbkey=CDS;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725940.1;locus_tag=LDO50_RS01870;product=thioesterase II family protein;protein_id=WP_224019343.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 15143 16042 . - . ID=gene-LDO50_RS01875;Name=LDO50_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01875;old_locus_tag=BVI1335_110009 NZ_CAJZAO010000013.1 Protein Homology CDS 15143 16042 . - 0 ID=cds-WP_224019345.1;Parent=gene-LDO50_RS01875;Dbxref=GenBank:WP_224019345.1;Name=WP_224019345.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF015431.6;locus_tag=LDO50_RS01875;product=LysR family transcriptional regulator;protein_id=WP_224019345.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 16139 17131 . - . ID=gene-LDO50_RS01880;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=LDO50_RS01880;old_locus_tag=BVI1335_110010 NZ_CAJZAO010000013.1 Protein Homology CDS 16139 17131 . - 0 ID=cds-WP_046422800.1;Parent=gene-LDO50_RS01880;Dbxref=GenBank:WP_046422800.1;Name=WP_046422800.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012428191.1;locus_tag=LDO50_RS01880;product=agmatinase;protein_id=WP_046422800.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 17626 18483 . + . ID=gene-LDO50_RS01885;Name=LDO50_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01885;old_locus_tag=BVI1335_110011 NZ_CAJZAO010000013.1 Protein Homology CDS 17626 18483 . + 0 ID=cds-WP_224019347.1;Parent=gene-LDO50_RS01885;Dbxref=GenBank:WP_224019347.1;Name=WP_224019347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007749287.1;locus_tag=LDO50_RS01885;product=transporter substrate-binding domain-containing protein;protein_id=WP_224019347.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 18535 19197 . + . ID=gene-LDO50_RS01890;Name=LDO50_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01890;old_locus_tag=BVI1335_110013 NZ_CAJZAO010000013.1 Protein Homology CDS 18535 19197 . + 0 ID=cds-WP_224019348.1;Parent=gene-LDO50_RS01890;Dbxref=GenBank:WP_224019348.1;Name=WP_224019348.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007583854.1;locus_tag=LDO50_RS01890;product=amino acid ABC transporter permease;protein_id=WP_224019348.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 19219 19872 . + . ID=gene-LDO50_RS01895;Name=LDO50_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01895;old_locus_tag=BVI1335_110014 NZ_CAJZAO010000013.1 Protein Homology CDS 19219 19872 . + 0 ID=cds-WP_224019350.1;Parent=gene-LDO50_RS01895;Dbxref=GenBank:WP_224019350.1;Name=WP_224019350.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028110.1;locus_tag=LDO50_RS01895;product=amino acid ABC transporter permease;protein_id=WP_224019350.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 19869 20693 . + . ID=gene-LDO50_RS01900;Name=LDO50_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01900;old_locus_tag=BVI1335_110012 NZ_CAJZAO010000013.1 Protein Homology CDS 19869 20693 . + 0 ID=cds-WP_290370667.1;Parent=gene-LDO50_RS01900;Dbxref=GenBank:WP_290370667.1;Name=WP_290370667.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012405305.1;locus_tag=LDO50_RS01900;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_290370667.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 20888 21193 . - . ID=gene-LDO50_RS01905;Name=LDO50_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01905;old_locus_tag=BVI1335_110015 NZ_CAJZAO010000013.1 Protein Homology CDS 20888 21193 . - 0 ID=cds-WP_046422790.1;Parent=gene-LDO50_RS01905;Dbxref=GenBank:WP_046422790.1;Name=WP_046422790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478802.1;locus_tag=LDO50_RS01905;product=DUF4148 domain-containing protein;protein_id=WP_046422790.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 21471 21683 . + . ID=gene-LDO50_RS01910;Name=LDO50_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01910;old_locus_tag=BVI1335_110016 NZ_CAJZAO010000013.1 Protein Homology CDS 21471 21683 . + 0 ID=cds-WP_059454687.1;Parent=gene-LDO50_RS01910;Dbxref=GenBank:WP_059454687.1;Name=WP_059454687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547495.1;locus_tag=LDO50_RS01910;product=hypothetical protein;protein_id=WP_059454687.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 22015 22692 . + . ID=gene-LDO50_RS01915;Name=LDO50_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01915;old_locus_tag=BVI1335_110017 NZ_CAJZAO010000013.1 Protein Homology CDS 22015 22692 . + 0 ID=cds-WP_046422786.1;Parent=gene-LDO50_RS01915;Dbxref=GenBank:WP_046422786.1;Name=WP_046422786.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877212.1;locus_tag=LDO50_RS01915;product=response regulator transcription factor;protein_id=WP_046422786.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 22807 24102 . + . ID=gene-LDO50_RS01920;Name=LDO50_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01920;old_locus_tag=BVI1335_110018 NZ_CAJZAO010000013.1 Protein Homology CDS 22807 24102 . + 0 ID=cds-WP_224019370.1;Parent=gene-LDO50_RS01920;Dbxref=GenBank:WP_224019370.1;Name=WP_224019370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478444.1;locus_tag=LDO50_RS01920;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_224019370.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 24161 24844 . + . ID=gene-LDO50_RS01925;Name=LDO50_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01925;old_locus_tag=BVI1335_110019 NZ_CAJZAO010000013.1 Protein Homology CDS 24161 24844 . + 0 ID=cds-WP_059454685.1;Parent=gene-LDO50_RS01925;Dbxref=GenBank:WP_059454685.1;Name=WP_059454685.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339832.1;locus_tag=LDO50_RS01925;product=response regulator transcription factor;protein_id=WP_059454685.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 24919 25179 . - . ID=gene-LDO50_RS01930;Name=LDO50_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01930;old_locus_tag=BVI1335_110020 NZ_CAJZAO010000013.1 GeneMarkS-2+ CDS 24919 25179 . - 0 ID=cds-WP_059457571.1;Parent=gene-LDO50_RS01930;Dbxref=GenBank:WP_059457571.1;Name=WP_059457571.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS01930;product=hypothetical protein;protein_id=WP_059457571.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 25185 25457 . - . ID=gene-LDO50_RS01935;Name=LDO50_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01935;old_locus_tag=BVI1335_110021 NZ_CAJZAO010000013.1 Protein Homology CDS 25185 25457 . - 0 ID=cds-WP_224019351.1;Parent=gene-LDO50_RS01935;Dbxref=GenBank:WP_224019351.1;Name=WP_224019351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547500.1;locus_tag=LDO50_RS01935;product=DUF4148 domain-containing protein;protein_id=WP_224019351.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 25771 26946 . + . ID=gene-LDO50_RS01940;Name=LDO50_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01940;old_locus_tag=BVI1335_110022 NZ_CAJZAO010000013.1 Protein Homology CDS 25771 26946 . + 0 ID=cds-WP_224019353.1;Parent=gene-LDO50_RS01940;Dbxref=GenBank:WP_224019353.1;Name=WP_224019353.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339835.1;locus_tag=LDO50_RS01940;product=porin;protein_id=WP_224019353.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 27033 28487 . - . ID=gene-LDO50_RS01945;Name=LDO50_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01945;old_locus_tag=BVI1335_110023 NZ_CAJZAO010000013.1 Protein Homology CDS 27033 28487 . - 0 ID=cds-WP_224019354.1;Parent=gene-LDO50_RS01945;Dbxref=GenBank:WP_224019354.1;Name=WP_224019354.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007178858.1;locus_tag=LDO50_RS01945;product=efflux transporter outer membrane subunit;protein_id=WP_224019354.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 28480 29685 . - . ID=gene-LDO50_RS01950;Name=LDO50_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01950;old_locus_tag=BVI1335_110024 NZ_CAJZAO010000013.1 Protein Homology CDS 28480 29685 . - 0 ID=cds-WP_059457567.1;Parent=gene-LDO50_RS01950;Dbxref=GenBank:WP_059457567.1;Name=WP_059457567.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478808.1;locus_tag=LDO50_RS01950;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_059457567.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 29675 32929 . - . ID=gene-LDO50_RS01955;Name=LDO50_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01955;old_locus_tag=BVI1335_110025 NZ_CAJZAO010000013.1 Protein Homology CDS 29675 32929 . - 0 ID=cds-WP_059461604.1;Parent=gene-LDO50_RS01955;Dbxref=GenBank:WP_059461604.1;Name=WP_059461604.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699621.1;locus_tag=LDO50_RS01955;product=efflux RND transporter permease subunit;protein_id=WP_059461604.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 33087 33761 . - . ID=gene-LDO50_RS01960;Name=LDO50_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01960;old_locus_tag=BVI1335_110026 NZ_CAJZAO010000013.1 Protein Homology CDS 33087 33761 . - 0 ID=cds-WP_046422774.1;Parent=gene-LDO50_RS01960;Dbxref=GenBank:WP_046422774.1;Name=WP_046422774.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478810.1;locus_tag=LDO50_RS01960;product=response regulator transcription factor;protein_id=WP_046422774.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 33784 34707 . - . ID=gene-LDO50_RS01965;Name=LDO50_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01965;old_locus_tag=BVI1335_110027 NZ_CAJZAO010000013.1 Protein Homology CDS 33784 34707 . - 0 ID=cds-WP_046422772.1;Parent=gene-LDO50_RS01965;Dbxref=GenBank:WP_046422772.1;Name=WP_046422772.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423798.1;locus_tag=LDO50_RS01965;product=LysR family transcriptional regulator;protein_id=WP_046422772.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 35038 35412 . + . ID=gene-LDO50_RS01970;Name=LDO50_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01970;old_locus_tag=BVI1335_110028 NZ_CAJZAO010000013.1 Protein Homology CDS 35038 35412 . + 0 ID=cds-WP_046422771.1;Parent=gene-LDO50_RS01970;Dbxref=GenBank:WP_046422771.1;Name=WP_046422771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547507.1;locus_tag=LDO50_RS01970;product=hypothetical protein;protein_id=WP_046422771.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 35561 36649 . - . ID=gene-LDO50_RS01975;Name=LDO50_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01975;old_locus_tag=BVI1335_110029 NZ_CAJZAO010000013.1 Protein Homology CDS 35561 36649 . - 0 ID=cds-WP_224019371.1;Parent=gene-LDO50_RS01975;Dbxref=GenBank:WP_224019371.1;Name=WP_224019371.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009902355.1;locus_tag=LDO50_RS01975;product=porin;protein_id=WP_224019371.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 37300 38706 . + . ID=gene-LDO50_RS01980;Name=LDO50_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01980;old_locus_tag=BVI1335_110030 NZ_CAJZAO010000013.1 Protein Homology CDS 37300 38706 . + 0 ID=cds-WP_059461602.1;Parent=gene-LDO50_RS01980;Dbxref=GenBank:WP_059461602.1;Name=WP_059461602.1;Ontology_term=GO:0006935;gbkey=CDS;go_process=chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339489.1;locus_tag=LDO50_RS01980;product=methyl-accepting chemotaxis protein;protein_id=WP_059461602.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 39301 39774 . + . ID=gene-LDO50_RS01985;Name=LDO50_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01985;old_locus_tag=BVI1335_110033 NZ_CAJZAO010000013.1 Protein Homology CDS 39301 39774 . + 0 ID=cds-WP_059577309.1;Parent=gene-LDO50_RS01985;Dbxref=GenBank:WP_059577309.1;Name=WP_059577309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352010.1;locus_tag=LDO50_RS01985;product=cupin domain-containing protein;protein_id=WP_059577309.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 39913 41073 . + . ID=gene-LDO50_RS01990;Name=LDO50_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01990;old_locus_tag=BVI1335_110034 NZ_CAJZAO010000013.1 Protein Homology CDS 39913 41073 . + 0 ID=cds-WP_034193953.1;Parent=gene-LDO50_RS01990;Dbxref=GenBank:WP_034193953.1;Name=WP_034193953.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011872570.1;locus_tag=LDO50_RS01990;product=IS30 family transposase;protein_id=WP_034193953.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 41181 41561 . + . ID=gene-LDO50_RS01995;Name=LDO50_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS01995;old_locus_tag=BVI1335_110035 NZ_CAJZAO010000013.1 Protein Homology CDS 41181 41561 . + 0 ID=cds-WP_059457562.1;Parent=gene-LDO50_RS01995;Dbxref=GenBank:WP_059457562.1;Name=WP_059457562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881461.1;locus_tag=LDO50_RS01995;product=hypothetical protein;protein_id=WP_059457562.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 41799 42059 . - . ID=gene-LDO50_RS02000;Name=LDO50_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02000;old_locus_tag=BVI1335_110036 NZ_CAJZAO010000013.1 GeneMarkS-2+ CDS 41799 42059 . - 0 ID=cds-WP_059581853.1;Parent=gene-LDO50_RS02000;Dbxref=GenBank:WP_059581853.1;Name=WP_059581853.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS02000;product=hypothetical protein;protein_id=WP_059581853.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 42144 43589 . + . ID=gene-LDO50_RS02005;Name=LDO50_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02005;old_locus_tag=BVI1335_110037 NZ_CAJZAO010000013.1 Protein Homology CDS 42144 43589 . + 0 ID=cds-WP_224019355.1;Parent=gene-LDO50_RS02005;Dbxref=GenBank:WP_224019355.1;Name=WP_224019355.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094623.1;locus_tag=LDO50_RS02005;product=IS1182 family transposase;protein_id=WP_224019355.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 43858 44859 . - . ID=gene-LDO50_RS02010;Name=LDO50_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02010;old_locus_tag=BVI1335_110038 NZ_CAJZAO010000013.1 Protein Homology CDS 43858 44859 . - 0 ID=cds-WP_224019356.1;Parent=gene-LDO50_RS02010;Dbxref=GenBank:WP_224019356.1;Name=WP_224019356.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423095.1;locus_tag=LDO50_RS02010;product=questin oxidase family protein;protein_id=WP_224019356.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 44945 45421 . + . ID=gene-LDO50_RS02015;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=LDO50_RS02015;old_locus_tag=BVI1335_110040 NZ_CAJZAO010000013.1 Protein Homology CDS 44945 45421 . + 0 ID=cds-WP_081052827.1;Parent=gene-LDO50_RS02015;Dbxref=GenBank:WP_081052827.1;Name=WP_081052827.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876237.1;locus_tag=LDO50_RS02015;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_081052827.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 45443 46153 . - . ID=gene-LDO50_RS02020;Name=LDO50_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02020;old_locus_tag=BVI1335_110041 NZ_CAJZAO010000013.1 Protein Homology CDS 45443 46153 . - 0 ID=cds-WP_059454675.1;Parent=gene-LDO50_RS02020;Dbxref=GenBank:WP_059454675.1;Name=WP_059454675.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480413.1;locus_tag=LDO50_RS02020;product=IclR family transcriptional regulator;protein_id=WP_059454675.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 46319 47017 . + . ID=gene-LDO50_RS02025;Name=LDO50_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02025;old_locus_tag=BVI1335_110043 NZ_CAJZAO010000013.1 Protein Homology CDS 46319 47017 . + 0 ID=cds-WP_224019357.1;Parent=gene-LDO50_RS02025;Dbxref=GenBank:WP_224019357.1;Name=WP_224019357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494199.1;locus_tag=LDO50_RS02025;product=RraA family protein;protein_id=WP_224019357.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 47017 47964 . + . ID=gene-LDO50_RS02030;Name=LDO50_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02030;old_locus_tag=BVI1335_110042 NZ_CAJZAO010000013.1 Protein Homology CDS 47017 47964 . + 0 ID=cds-WP_059701506.1;Parent=gene-LDO50_RS02030;Dbxref=GenBank:WP_059701506.1;Name=WP_059701506.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406183.1;locus_tag=LDO50_RS02030;product=hydroxyacid dehydrogenase;protein_id=WP_059701506.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 47986 48915 . + . ID=gene-LDO50_RS02035;Name=LDO50_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02035;old_locus_tag=BVI1335_110044 NZ_CAJZAO010000013.1 Protein Homology CDS 47986 48915 . + 0 ID=cds-WP_224019360.1;Parent=gene-LDO50_RS02035;Dbxref=GenBank:WP_224019360.1;Name=WP_224019360.1;Ontology_term=GO:0005515,GO:0016787,GO:0046872;gbkey=CDS;go_function=protein binding|0005515||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414539.1;locus_tag=LDO50_RS02035;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_224019360.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 49001 50380 . + . ID=gene-LDO50_RS02040;Name=LDO50_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02040;old_locus_tag=BVI1335_110045 NZ_CAJZAO010000013.1 Protein Homology CDS 49001 50380 . + 0 ID=cds-WP_059621611.1;Parent=gene-LDO50_RS02040;Dbxref=GenBank:WP_059621611.1;Name=WP_059621611.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406185.1;locus_tag=LDO50_RS02040;product=MFS transporter;protein_id=WP_059621611.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 50425 51576 . + . ID=gene-LDO50_RS02045;Name=LDO50_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02045;old_locus_tag=BVI1335_110046 NZ_CAJZAO010000013.1 Protein Homology CDS 50425 51576 . + 0 ID=cds-WP_059582553.1;Parent=gene-LDO50_RS02045;Dbxref=GenBank:WP_059582553.1;Name=WP_059582553.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339319.1;locus_tag=LDO50_RS02045;product=porin;protein_id=WP_059582553.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 51587 52633 . + . ID=gene-LDO50_RS02050;Name=LDO50_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02050;old_locus_tag=BVI1335_110047 NZ_CAJZAO010000013.1 Protein Homology CDS 51587 52633 . + 0 ID=cds-WP_140994332.1;Parent=gene-LDO50_RS02050;Dbxref=GenBank:WP_140994332.1;Name=WP_140994332.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549027.1;locus_tag=LDO50_RS02050;product=amidohydrolase family protein;protein_id=WP_140994332.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 52630 53910 . + . ID=gene-LDO50_RS02055;Name=LDO50_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02055;old_locus_tag=BVI1335_110048 NZ_CAJZAO010000013.1 Protein Homology CDS 52630 53910 . + 0 ID=cds-WP_224019361.1;Parent=gene-LDO50_RS02055;Dbxref=GenBank:WP_224019361.1;Name=WP_224019361.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217357.1;locus_tag=LDO50_RS02055;product=MFS transporter;protein_id=WP_224019361.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 53907 55145 . + . ID=gene-LDO50_RS02060;Name=LDO50_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02060;old_locus_tag=BVI1335_110049 NZ_CAJZAO010000013.1 Protein Homology CDS 53907 55145 . + 0 ID=cds-WP_224019362.1;Parent=gene-LDO50_RS02060;Dbxref=GenBank:WP_224019362.1;Name=WP_224019362.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339322.1;locus_tag=LDO50_RS02060;product=MFS transporter;protein_id=WP_224019362.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 55156 56478 . + . ID=gene-LDO50_RS02065;Name=LDO50_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02065;old_locus_tag=BVI1335_110050 NZ_CAJZAO010000013.1 Protein Homology CDS 55156 56478 . + 0 ID=cds-WP_046422743.1;Parent=gene-LDO50_RS02065;Dbxref=GenBank:WP_046422743.1;Name=WP_046422743.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549030.1;locus_tag=LDO50_RS02065;product=MFS transporter;protein_id=WP_046422743.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 56481 57413 . + . ID=gene-LDO50_RS02070;Name=LDO50_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02070;old_locus_tag=BVI1335_110051 NZ_CAJZAO010000013.1 Protein Homology CDS 56481 57413 . + 0 ID=cds-WP_059454667.1;Parent=gene-LDO50_RS02070;Dbxref=GenBank:WP_059454667.1;Name=WP_059454667.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406191.1;locus_tag=LDO50_RS02070;product=amidohydrolase family protein;protein_id=WP_059454667.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq pseudogene 57490 58019 . - . ID=gene-LDO50_RS02075;Name=LDO50_RS02075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS02075;old_locus_tag=BVI1335_110053;partial=true;pseudo=true;start_range=.,57490 NZ_CAJZAO010000013.1 Protein Homology CDS 57490 58019 . - 0 ID=cds-LDO50_RS02075;Parent=gene-LDO50_RS02075;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_126354034.1;locus_tag=LDO50_RS02075;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,57490;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 58353 60143 . + . ID=gene-LDO50_RS02080;Name=LDO50_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02080;old_locus_tag=BVI1335_110055 NZ_CAJZAO010000013.1 Protein Homology CDS 58353 60143 . + 0 ID=cds-WP_059548302.1;Parent=gene-LDO50_RS02080;Dbxref=GenBank:WP_059548302.1;Name=WP_059548302.1;Ontology_term=GO:0016491,GO:0020037,GO:0046872,GO:0050311,GO:0051536,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA,sulfite reductase (ferredoxin) activity|0050311||IEA,iron-sulfur cluster binding|0051536||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880194.1;locus_tag=LDO50_RS02080;product=nitrite/sulfite reductase;protein_id=WP_059548302.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 60140 60547 . + . ID=gene-LDO50_RS02085;Name=LDO50_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02085;old_locus_tag=BVI1335_110056 NZ_CAJZAO010000013.1 Protein Homology CDS 60140 60547 . + 0 ID=cds-WP_059454665.1;Parent=gene-LDO50_RS02085;Dbxref=GenBank:WP_059454665.1;Name=WP_059454665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880193.1;locus_tag=LDO50_RS02085;product=DUF934 domain-containing protein;protein_id=WP_059454665.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 60671 61093 . + . ID=gene-LDO50_RS02090;Name=LDO50_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02090 NZ_CAJZAO010000013.1 Protein Homology CDS 60671 61093 . + 0 ID=cds-WP_253074453.1;Parent=gene-LDO50_RS02090;Dbxref=GenBank:WP_253074453.1;Name=WP_253074453.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014376.6;locus_tag=LDO50_RS02090;product=hypothetical protein;protein_id=WP_253074453.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 61664 62323 . + . ID=gene-LDO50_RS02100;Name=LDO50_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02100;old_locus_tag=BVI1335_110059 NZ_CAJZAO010000013.1 Protein Homology CDS 61664 62323 . + 0 ID=cds-WP_059457757.1;Parent=gene-LDO50_RS02100;Dbxref=GenBank:WP_059457757.1;Name=WP_059457757.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761771.1;locus_tag=LDO50_RS02100;product=carbonic anhydrase;protein_id=WP_059457757.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 62385 62855 . + . ID=gene-LDO50_RS02105;Name=cynS;gbkey=Gene;gene=cynS;gene_biotype=protein_coding;locus_tag=LDO50_RS02105;old_locus_tag=BVI1335_110060 NZ_CAJZAO010000013.1 Protein Homology CDS 62385 62855 . + 0 ID=cds-WP_059457549.1;Parent=gene-LDO50_RS02105;Dbxref=GenBank:WP_059457549.1;Name=WP_059457549.1;Ontology_term=GO:0006082,GO:0008824;gbkey=CDS;gene=cynS;go_function=cyanate hydratase activity|0008824||IEA;go_process=organic acid metabolic process|0006082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020204195.1;locus_tag=LDO50_RS02105;product=cyanase;protein_id=WP_059457549.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 63001 63480 . + . ID=gene-LDO50_RS02110;Name=LDO50_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02110;old_locus_tag=BVI1335_110061 NZ_CAJZAO010000013.1 Protein Homology CDS 63001 63480 . + 0 ID=cds-WP_046424764.1;Parent=gene-LDO50_RS02110;Dbxref=GenBank:WP_046424764.1;Name=WP_046424764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018437286.1;locus_tag=LDO50_RS02110;product=nuclear transport factor 2 family protein;protein_id=WP_046424764.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 63911 64168 . + . ID=gene-LDO50_RS02115;Name=LDO50_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02115;old_locus_tag=BVI1335_110064 NZ_CAJZAO010000013.1 Protein Homology CDS 63911 64168 . + 0 ID=cds-WP_059493832.1;Parent=gene-LDO50_RS02115;Dbxref=GenBank:WP_059493832.1;Name=WP_059493832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880172.1;locus_tag=LDO50_RS02115;product=hypothetical protein;protein_id=WP_059493832.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 64591 65478 . - . ID=gene-LDO50_RS02120;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=LDO50_RS02120;old_locus_tag=BVI1335_110065 NZ_CAJZAO010000013.1 Protein Homology CDS 64591 65478 . - 0 ID=cds-WP_059457756.1;Parent=gene-LDO50_RS02120;Dbxref=GenBank:WP_059457756.1;Name=WP_059457756.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cynR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372076.1;locus_tag=LDO50_RS02120;product=transcriptional regulator CynR;protein_id=WP_059457756.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 66287 66775 . - . ID=gene-LDO50_RS02130;Name=LDO50_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02130;old_locus_tag=BVI1335_110066 NZ_CAJZAO010000013.1 Protein Homology CDS 66287 66775 . - 0 ID=cds-WP_059493830.1;Parent=gene-LDO50_RS02130;Dbxref=GenBank:WP_059493830.1;Name=WP_059493830.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732893.1;locus_tag=LDO50_RS02130;product=GNAT family N-acetyltransferase;protein_id=WP_059493830.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 66772 67041 . - . ID=gene-LDO50_RS02135;Name=LDO50_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02135;old_locus_tag=BVI1335_110067 NZ_CAJZAO010000013.1 Protein Homology CDS 66772 67041 . - 0 ID=cds-WP_059457546.1;Parent=gene-LDO50_RS02135;Dbxref=GenBank:WP_059457546.1;Name=WP_059457546.1;Ontology_term=GO:0006355,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424109.1;locus_tag=LDO50_RS02135;product=type II toxin-antitoxin system TacA family antitoxin;protein_id=WP_059457546.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 67437 68003 . - . ID=gene-LDO50_RS02140;Name=LDO50_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02140;old_locus_tag=BVI1335_110068 NZ_CAJZAO010000013.1 Protein Homology CDS 67437 68003 . - 0 ID=cds-WP_060715418.1;Parent=gene-LDO50_RS02140;Dbxref=GenBank:WP_060715418.1;Name=WP_060715418.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019498.6;locus_tag=LDO50_RS02140;product=cupin domain-containing protein;protein_id=WP_060715418.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 68037 68543 . - . ID=gene-LDO50_RS02145;Name=LDO50_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02145;old_locus_tag=BVI1335_110069 NZ_CAJZAO010000013.1 Protein Homology CDS 68037 68543 . - 0 ID=cds-WP_081052188.1;Parent=gene-LDO50_RS02145;Dbxref=GenBank:WP_081052188.1;Name=WP_081052188.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF014609.6;locus_tag=LDO50_RS02145;product=PhzF family phenazine biosynthesis protein;protein_id=WP_081052188.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 68569 68724 . + . ID=gene-LDO50_RS02150;Name=LDO50_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02150 NZ_CAJZAO010000013.1 GeneMarkS-2+ CDS 68569 68724 . + 0 ID=cds-WP_224019363.1;Parent=gene-LDO50_RS02150;Dbxref=GenBank:WP_224019363.1;Name=WP_224019363.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS02150;product=hypothetical protein;protein_id=WP_224019363.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 68691 69506 . - . ID=gene-LDO50_RS02155;Name=LDO50_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02155;old_locus_tag=BVI1335_110071 NZ_CAJZAO010000013.1 Protein Homology CDS 68691 69506 . - 0 ID=cds-WP_224019364.1;Parent=gene-LDO50_RS02155;Dbxref=GenBank:WP_224019364.1;Name=WP_224019364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725879.1;locus_tag=LDO50_RS02155;product=TOBE domain-containing protein;protein_id=WP_224019364.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 69519 70298 . - . ID=gene-LDO50_RS02160;Name=LDO50_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02160;old_locus_tag=BVI1335_110072 NZ_CAJZAO010000013.1 Protein Homology CDS 69519 70298 . - 0 ID=cds-WP_224019365.1;Parent=gene-LDO50_RS02160;Dbxref=GenBank:WP_224019365.1;Name=WP_224019365.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725878.1;locus_tag=LDO50_RS02160;product=ATP-binding cassette domain-containing protein;protein_id=WP_224019365.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 70311 71063 . - . ID=gene-LDO50_RS02165;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=LDO50_RS02165;old_locus_tag=BVI1335_110073 NZ_CAJZAO010000013.1 Protein Homology CDS 70311 71063 . - 0 ID=cds-WP_059493826.1;Parent=gene-LDO50_RS02165;Dbxref=GenBank:WP_059493826.1;Name=WP_059493826.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880162.1;locus_tag=LDO50_RS02165;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_059493826.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 71079 71753 . - . ID=gene-LDO50_RS02170;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=LDO50_RS02170;old_locus_tag=BVI1335_110074 NZ_CAJZAO010000013.1 Protein Homology CDS 71079 71753 . - 0 ID=cds-WP_059493824.1;Parent=gene-LDO50_RS02170;Dbxref=GenBank:WP_059493824.1;Name=WP_059493824.1;Ontology_term=GO:0015689,GO:0015412,GO:0005886,GO:0055052;gbkey=CDS;gene=modB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725876.1;locus_tag=LDO50_RS02170;product=molybdate ABC transporter permease subunit;protein_id=WP_059493824.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 72100 72642 . - . ID=gene-LDO50_RS02175;Name=LDO50_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02175;old_locus_tag=BVI1335_110075 NZ_CAJZAO010000013.1 Protein Homology CDS 72100 72642 . - 0 ID=cds-WP_046424777.1;Parent=gene-LDO50_RS02175;Dbxref=GenBank:WP_046424777.1;Name=WP_046424777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725875.1;locus_tag=LDO50_RS02175;product=DUF2325 domain-containing protein;protein_id=WP_046424777.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 72645 73262 . - . ID=gene-LDO50_RS02180;Name=LDO50_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02180;old_locus_tag=BVI1335_110076 NZ_CAJZAO010000013.1 Protein Homology CDS 72645 73262 . - 0 ID=cds-WP_052747048.1;Parent=gene-LDO50_RS02180;Dbxref=GenBank:WP_052747048.1;Name=WP_052747048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725874.1;locus_tag=LDO50_RS02180;product=oxygen-binding protein;protein_id=WP_052747048.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 73362 73949 . - . ID=gene-LDO50_RS02185;Name=LDO50_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02185;old_locus_tag=BVI1335_110077 NZ_CAJZAO010000013.1 Protein Homology CDS 73362 73949 . - 0 ID=cds-WP_046424779.1;Parent=gene-LDO50_RS02185;Dbxref=GenBank:WP_046424779.1;Name=WP_046424779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725873.1;locus_tag=LDO50_RS02185;product=nitrogen fixation protein NifQ;protein_id=WP_046424779.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 73964 74272 . - . ID=gene-LDO50_RS02190;Name=fdxB;gbkey=Gene;gene=fdxB;gene_biotype=protein_coding;locus_tag=LDO50_RS02190;old_locus_tag=BVI1335_110078 NZ_CAJZAO010000013.1 Protein Homology CDS 73964 74272 . - 0 ID=cds-WP_011880156.1;Parent=gene-LDO50_RS02190;Dbxref=GenBank:WP_011880156.1;Name=WP_011880156.1;gbkey=CDS;gene=fdxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880156.1;locus_tag=LDO50_RS02190;product=ferredoxin III%2C nif-specific;protein_id=WP_011880156.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 74289 74480 . - . ID=gene-LDO50_RS02195;Name=LDO50_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02195;old_locus_tag=BVI1335_110079 NZ_CAJZAO010000013.1 Protein Homology CDS 74289 74480 . - 0 ID=cds-WP_011880155.1;Parent=gene-LDO50_RS02195;Dbxref=GenBank:WP_011880155.1;Name=WP_011880155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880155.1;locus_tag=LDO50_RS02195;product=CCE_0567 family metalloprotein;protein_id=WP_011880155.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 74504 74995 . - . ID=gene-LDO50_RS02200;Name=LDO50_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02200;old_locus_tag=BVI1335_110080 NZ_CAJZAO010000013.1 Protein Homology CDS 74504 74995 . - 0 ID=cds-WP_014725872.1;Parent=gene-LDO50_RS02200;Dbxref=GenBank:WP_014725872.1;Name=WP_014725872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725872.1;locus_tag=LDO50_RS02200;product=NifX-associated nitrogen fixation protein;protein_id=WP_014725872.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 74988 75404 . - . ID=gene-LDO50_RS02205;Name=nifX;gbkey=Gene;gene=nifX;gene_biotype=protein_coding;locus_tag=LDO50_RS02205;old_locus_tag=BVI1335_110081 NZ_CAJZAO010000013.1 Protein Homology CDS 74988 75404 . - 0 ID=cds-WP_011880153.1;Parent=gene-LDO50_RS02205;Dbxref=GenBank:WP_011880153.1;Name=WP_011880153.1;Ontology_term=GO:0009399,GO:0051540;gbkey=CDS;gene=nifX;go_function=metal cluster binding|0051540||IEA;go_process=nitrogen fixation|0009399||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880153.1;locus_tag=LDO50_RS02205;product=nitrogen fixation protein NifX;protein_id=WP_011880153.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 75401 76813 . - . ID=gene-LDO50_RS02210;Name=nifN;gbkey=Gene;gene=nifN;gene_biotype=protein_coding;locus_tag=LDO50_RS02210;old_locus_tag=BVI1335_110082 NZ_CAJZAO010000013.1 Protein Homology CDS 75401 76813 . - 0 ID=cds-WP_224019366.1;Parent=gene-LDO50_RS02210;Dbxref=GenBank:WP_224019366.1;Name=WP_224019366.1;Ontology_term=GO:0009399,GO:0065003;gbkey=CDS;gene=nifN;go_process=nitrogen fixation|0009399||IEA,protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725871.1;locus_tag=LDO50_RS02210;product=nitrogenase iron-molybdenum cofactor biosynthesis protein NifN;protein_id=WP_224019366.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 76834 78327 . - . ID=gene-LDO50_RS02215;Name=nifE;gbkey=Gene;gene=nifE;gene_biotype=protein_coding;locus_tag=LDO50_RS02215;old_locus_tag=BVI1335_110083 NZ_CAJZAO010000013.1 Protein Homology CDS 76834 78327 . - 0 ID=cds-WP_224019367.1;Parent=gene-LDO50_RS02215;Dbxref=GenBank:WP_224019367.1;Name=WP_224019367.1;Ontology_term=GO:0009399,GO:0065003;gbkey=CDS;gene=nifE;go_process=nitrogen fixation|0009399||IEA,protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880151.1;locus_tag=LDO50_RS02215;product=nitrogenase iron-molybdenum cofactor biosynthesis protein NifE;protein_id=WP_224019367.1;transl_table=11 NZ_CAJZAO010000013.1 RefSeq gene 78634 78983 . - . ID=gene-LDO50_RS02220;Name=LDO50_RS02220;end_range=78983,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02220;old_locus_tag=BVI1335_110084;partial=true NZ_CAJZAO010000013.1 Protein Homology CDS 78634 78983 . - 2 ID=cds-WP_224019368.1;Parent=gene-LDO50_RS02220;Dbxref=GenBank:WP_224019368.1;Name=WP_224019368.1;end_range=78983,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880150.1;locus_tag=LDO50_RS02220;partial=true;product=hypothetical protein;protein_id=WP_224019368.1;transl_table=11 ##sequence-region NZ_CAJZAO010000014.1 1 24855 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000014.1 RefSeq region 1 24855 . + . ID=NZ_CAJZAO010000014.1:1..24855;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_110 NZ_CAJZAO010000014.1 RefSeq pseudogene 1 290 . - . ID=gene-LDO50_RS02225;Name=LDO50_RS02225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS02225;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000014.1 Protein Homology CDS 1 290 . - 0 ID=cds-LDO50_RS02225;Parent=gene-LDO50_RS02225;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724524.1;locus_tag=LDO50_RS02225;partial=true;product=secretion protein HylD;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000014.1 RefSeq gene 295 1068 . - . ID=gene-LDO50_RS02230;Name=LDO50_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02230;old_locus_tag=BVI1335_1100002 NZ_CAJZAO010000014.1 Protein Homology CDS 295 1068 . - 0 ID=cds-WP_014724525.1;Parent=gene-LDO50_RS02230;Dbxref=GenBank:WP_014724525.1;Name=WP_014724525.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724525.1;locus_tag=LDO50_RS02230;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_014724525.1;transl_table=11 NZ_CAJZAO010000014.1 RefSeq gene 1065 2714 . - . ID=gene-LDO50_RS02235;Name=LDO50_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02235;old_locus_tag=BVI1335_1100003 NZ_CAJZAO010000014.1 Protein Homology CDS 1065 2714 . - 0 ID=cds-WP_069224534.1;Parent=gene-LDO50_RS02235;Dbxref=GenBank:WP_069224534.1;Name=WP_069224534.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690164.1;locus_tag=LDO50_RS02235;product=TolC family protein;protein_id=WP_069224534.1;transl_table=11 NZ_CAJZAO010000014.1 RefSeq gene 2711 4046 . - . ID=gene-LDO50_RS31220;Name=LDO50_RS31220;end_range=4046,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31220;old_locus_tag=BVI1335_1100004;partial=true NZ_CAJZAO010000014.1 Protein Homology CDS 2711 4046 . - 1 ID=cds-WP_443797701.1;Parent=gene-LDO50_RS31220;Dbxref=GenBank:WP_443797701.1;Name=WP_443797701.1;end_range=4046,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724527.1;locus_tag=LDO50_RS31220;partial=true;product=putative Ig domain-containing protein;protein_id=WP_443797701.1;transl_table=11 NZ_CAJZAO010000014.1 RefSeq gene 4733 9741 . - . ID=gene-LDO50_RS02240;Name=LDO50_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02240;old_locus_tag=BVI1335_1100006;partial=true;start_range=.,4733 NZ_CAJZAO010000014.1 Protein Homology CDS 4733 9741 . - 0 ID=cds-WP_224019375.1;Parent=gene-LDO50_RS02240;Dbxref=GenBank:WP_224019375.1;Name=WP_224019375.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025611.6;locus_tag=LDO50_RS02240;partial=true;product=DUF4347 domain-containing protein;protein_id=WP_224019375.1;start_range=.,4733;transl_table=11 NZ_CAJZAO010000014.1 RefSeq gene 10233 10448 . - . ID=gene-LDO50_RS02250;Name=LDO50_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02250;old_locus_tag=BVI1335_1100008 NZ_CAJZAO010000014.1 GeneMarkS-2+ CDS 10233 10448 . - 0 ID=cds-WP_155625245.1;Parent=gene-LDO50_RS02250;Dbxref=GenBank:WP_155625245.1;Name=WP_155625245.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS02250;product=hypothetical protein;protein_id=WP_155625245.1;transl_table=11 NZ_CAJZAO010000014.1 RefSeq gene 10587 10946 . + . ID=gene-LDO50_RS02255;Name=LDO50_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02255;old_locus_tag=BVI1335_1100009 NZ_CAJZAO010000014.1 GeneMarkS-2+ CDS 10587 10946 . + 0 ID=cds-WP_224019376.1;Parent=gene-LDO50_RS02255;Dbxref=GenBank:WP_224019376.1;Name=WP_224019376.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS02255;product=hypothetical protein;protein_id=WP_224019376.1;transl_table=11 NZ_CAJZAO010000014.1 RefSeq gene 11010 12305 . - . ID=gene-LDO50_RS02260;Name=LDO50_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02260;old_locus_tag=BVI1335_1100010 NZ_CAJZAO010000014.1 Protein Homology CDS 11010 12305 . - 0 ID=cds-WP_059895336.1;Parent=gene-LDO50_RS02260;Dbxref=GenBank:WP_059895336.1;Name=WP_059895336.1;Ontology_term=GO:0019346,GO:0016765,GO:0030170;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188263.1;locus_tag=LDO50_RS02260;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein;protein_id=WP_059895336.1;transl_table=11 NZ_CAJZAO010000014.1 RefSeq gene 12470 13231 . - . ID=gene-LDO50_RS02265;Name=LDO50_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02265;old_locus_tag=BVI1335_1100011 NZ_CAJZAO010000014.1 Protein Homology CDS 12470 13231 . - 0 ID=cds-WP_081350615.1;Parent=gene-LDO50_RS02265;Dbxref=GenBank:WP_081350615.1;Name=WP_081350615.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766900.1;locus_tag=LDO50_RS02265;product=class I SAM-dependent methyltransferase;protein_id=WP_081350615.1;transl_table=11 NZ_CAJZAO010000014.1 RefSeq gene 13246 13872 . - . ID=gene-LDO50_RS02270;Name=LDO50_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02270;old_locus_tag=BVI1335_1100012 NZ_CAJZAO010000014.1 Protein Homology CDS 13246 13872 . - 0 ID=cds-WP_014724530.1;Parent=gene-LDO50_RS02270;Dbxref=GenBank:WP_014724530.1;Name=WP_014724530.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355998.1;locus_tag=LDO50_RS02270;product=LysE family translocator;protein_id=WP_014724530.1;transl_table=11 NZ_CAJZAO010000014.1 RefSeq gene 14927 16423 . - . ID=gene-LDO50_RS02275;Name=LDO50_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02275;old_locus_tag=BVI1335_1100014 NZ_CAJZAO010000014.1 Protein Homology CDS 14927 16423 . - 0 ID=cds-WP_224019377.1;Parent=gene-LDO50_RS02275;Dbxref=GenBank:WP_224019377.1;Name=WP_224019377.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724532.1;locus_tag=LDO50_RS02275;product=GMC family oxidoreductase;protein_id=WP_224019377.1;transl_table=11 NZ_CAJZAO010000014.1 RefSeq gene 16461 17948 . - . ID=gene-LDO50_RS02280;Name=LDO50_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02280;old_locus_tag=BVI1335_1100015 NZ_CAJZAO010000014.1 Protein Homology CDS 16461 17948 . - 0 ID=cds-WP_224019378.1;Parent=gene-LDO50_RS02280;Dbxref=GenBank:WP_224019378.1;Name=WP_224019378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724533.1;locus_tag=LDO50_RS02280;product=hypothetical protein;protein_id=WP_224019378.1;transl_table=11 NZ_CAJZAO010000014.1 RefSeq gene 17957 18952 . - . ID=gene-LDO50_RS02285;Name=LDO50_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02285;old_locus_tag=BVI1335_1100016 NZ_CAJZAO010000014.1 Protein Homology CDS 17957 18952 . - 0 ID=cds-WP_224019380.1;Parent=gene-LDO50_RS02285;Dbxref=GenBank:WP_224019380.1;Name=WP_224019380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724534.1;locus_tag=LDO50_RS02285;product=iron-containing redox enzyme family protein;protein_id=WP_224019380.1;transl_table=11 NZ_CAJZAO010000014.1 RefSeq gene 18963 19928 . - . ID=gene-LDO50_RS02290;Name=LDO50_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02290;old_locus_tag=BVI1335_1100017 NZ_CAJZAO010000014.1 Protein Homology CDS 18963 19928 . - 0 ID=cds-WP_045578223.1;Parent=gene-LDO50_RS02290;Dbxref=GenBank:WP_045578223.1;Name=WP_045578223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018437909.1;locus_tag=LDO50_RS02290;product=iron-containing redox enzyme family protein;protein_id=WP_045578223.1;transl_table=11 NZ_CAJZAO010000014.1 RefSeq gene 20005 20184 . - . ID=gene-LDO50_RS02295;Name=LDO50_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02295;old_locus_tag=BVI1335_1100018 NZ_CAJZAO010000014.1 Protein Homology CDS 20005 20184 . - 0 ID=cds-WP_034194930.1;Parent=gene-LDO50_RS02295;Dbxref=GenBank:WP_034194930.1;Name=WP_034194930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018437908.1;locus_tag=LDO50_RS02295;product=hypothetical protein;protein_id=WP_034194930.1;transl_table=11 NZ_CAJZAO010000014.1 RefSeq gene 20329 20535 . - . ID=gene-LDO50_RS02300;Name=LDO50_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02300;old_locus_tag=BVI1335_1100019 NZ_CAJZAO010000014.1 Protein Homology CDS 20329 20535 . - 0 ID=cds-WP_224019383.1;Parent=gene-LDO50_RS02300;Dbxref=GenBank:WP_224019383.1;Name=WP_224019383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332137.1;locus_tag=LDO50_RS02300;product=hypothetical protein;protein_id=WP_224019383.1;transl_table=11 NZ_CAJZAO010000014.1 RefSeq gene 20882 21889 . + . ID=gene-LDO50_RS02305;Name=LDO50_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02305;old_locus_tag=BVI1335_1100021 NZ_CAJZAO010000014.1 Protein Homology CDS 20882 21889 . + 0 ID=cds-WP_045578222.1;Parent=gene-LDO50_RS02305;Dbxref=GenBank:WP_045578222.1;Name=WP_045578222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724538.1;locus_tag=LDO50_RS02305;product=iron-containing redox enzyme family protein;protein_id=WP_045578222.1;transl_table=11 NZ_CAJZAO010000014.1 RefSeq gene 22158 23495 . - . ID=gene-LDO50_RS02310;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=LDO50_RS02310;old_locus_tag=BVI1335_1100023 NZ_CAJZAO010000014.1 Protein Homology CDS 22158 23495 . - 0 ID=cds-WP_045578221.1;Parent=gene-LDO50_RS02310;Dbxref=GenBank:WP_045578221.1;Name=WP_045578221.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881448.1;locus_tag=LDO50_RS02310;product=argininosuccinate synthase;protein_id=WP_045578221.1;transl_table=11 NZ_CAJZAO010000014.1 RefSeq gene 23825 24654 . - . ID=gene-LDO50_RS02315;Name=LDO50_RS02315;end_range=24654,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02315;old_locus_tag=BVI1335_1100024;partial=true NZ_CAJZAO010000014.1 Protein Homology CDS 23825 24654 . - 2 ID=cds-WP_443797702.1;Parent=gene-LDO50_RS02315;Dbxref=GenBank:WP_443797702.1;Name=WP_443797702.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;end_range=24654,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202241.1;locus_tag=LDO50_RS02315;partial=true;product=FUSC family protein;protein_id=WP_443797702.1;transl_table=11 NZ_CAJZAO010000014.1 RefSeq pseudogene 24665 24795 . - . ID=gene-LDO50_RS31225;Name=LDO50_RS31225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31225;old_locus_tag=BVI1335_1100025;partial=true;pseudo=true;start_range=.,24665 NZ_CAJZAO010000014.1 Protein Homology CDS 24665 24795 . - 0 ID=cds-LDO50_RS31225;Parent=gene-LDO50_RS31225;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202241.1;locus_tag=LDO50_RS31225;partial=true;product=FUSC family protein;pseudo=true;start_range=.,24665;transl_table=11 ##sequence-region NZ_CAJZAO010000015.1 1 12632 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000015.1 RefSeq region 1 12632 . + . ID=NZ_CAJZAO010000015.1:1..12632;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_111 NZ_CAJZAO010000015.1 RefSeq pseudogene 1 171 . - . ID=gene-LDO50_RS31230;Name=LDO50_RS31230;end_range=171,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31230;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000015.1 Protein Homology CDS 1 171 . - 1 ID=cds-LDO50_RS31230;Parent=gene-LDO50_RS31230;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=171,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482807.1;locus_tag=LDO50_RS31230;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000015.1 RefSeq gene 182 458 . - . ID=gene-LDO50_RS31235;Name=LDO50_RS31235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31235;old_locus_tag=BVI1335_1110002;partial=true;start_range=.,182 NZ_CAJZAO010000015.1 Protein Homology CDS 182 458 . - 0 ID=cds-WP_224024852.1;Parent=gene-LDO50_RS31235;Dbxref=GenBank:WP_224024852.1;Name=WP_224024852.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482807.1;locus_tag=LDO50_RS31235;partial=true;product=GNAT family N-acetyltransferase;protein_id=WP_224024852.1;start_range=.,182;transl_table=11 NZ_CAJZAO010000015.1 RefSeq gene 673 861 . + . ID=gene-LDO50_RS02325;Name=LDO50_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02325;old_locus_tag=BVI1335_1110003 NZ_CAJZAO010000015.1 GeneMarkS-2+ CDS 673 861 . + 0 ID=cds-WP_124260061.1;Parent=gene-LDO50_RS02325;Dbxref=GenBank:WP_124260061.1;Name=WP_124260061.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS02325;product=hypothetical protein;protein_id=WP_124260061.1;transl_table=11 NZ_CAJZAO010000015.1 RefSeq gene 927 1595 . + . ID=gene-LDO50_RS02330;Name=LDO50_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02330;old_locus_tag=BVI1335_1110004 NZ_CAJZAO010000015.1 Protein Homology CDS 927 1595 . + 0 ID=cds-WP_059456695.1;Parent=gene-LDO50_RS02330;Dbxref=GenBank:WP_059456695.1;Name=WP_059456695.1;Ontology_term=GO:0019120;gbkey=CDS;go_function=hydrolase activity%2C acting on acid halide bonds%2C in C-halide compounds|0019120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549842.1;locus_tag=LDO50_RS02330;product=haloacid dehalogenase type II;protein_id=WP_059456695.1;transl_table=11 NZ_CAJZAO010000015.1 RefSeq gene 1764 3302 . + . ID=gene-LDO50_RS02335;Name=LDO50_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02335;old_locus_tag=BVI1335_1110005 NZ_CAJZAO010000015.1 Protein Homology CDS 1764 3302 . + 0 ID=cds-WP_059548679.1;Parent=gene-LDO50_RS02335;Dbxref=GenBank:WP_059548679.1;Name=WP_059548679.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762108.1;locus_tag=LDO50_RS02335;product=methyl-accepting chemotaxis protein;protein_id=WP_059548679.1;transl_table=11 NZ_CAJZAO010000015.1 RefSeq gene 3286 3516 . - . ID=gene-LDO50_RS02340;Name=LDO50_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02340;old_locus_tag=BVI1335_1110006 NZ_CAJZAO010000015.1 GeneMarkS-2+ CDS 3286 3516 . - 0 ID=cds-WP_059548682.1;Parent=gene-LDO50_RS02340;Dbxref=GenBank:WP_059548682.1;Name=WP_059548682.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS02340;product=hypothetical protein;protein_id=WP_059548682.1;transl_table=11 NZ_CAJZAO010000015.1 RefSeq gene 3747 5639 . + . ID=gene-LDO50_RS02345;Name=LDO50_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02345;old_locus_tag=BVI1335_1110007 NZ_CAJZAO010000015.1 Protein Homology CDS 3747 5639 . + 0 ID=cds-WP_059457700.1;Parent=gene-LDO50_RS02345;Dbxref=GenBank:WP_059457700.1;Name=WP_059457700.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880478.1;locus_tag=LDO50_RS02345;product=methyl-accepting chemotaxis protein;protein_id=WP_059457700.1;transl_table=11 NZ_CAJZAO010000015.1 RefSeq pseudogene 5750 6096 . - . ID=gene-LDO50_RS02350;Name=LDO50_RS02350;end_range=6096,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS02350;old_locus_tag=BVI1335_1110008;partial=true;pseudo=true NZ_CAJZAO010000015.1 Protein Homology CDS 5750 6096 . - 0 ID=cds-LDO50_RS02350;Parent=gene-LDO50_RS02350;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=6096,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013591152.1;locus_tag=LDO50_RS02350;partial=true;product=PLP-dependent aminotransferase family protein;pseudo=true;transl_table=11 NZ_CAJZAO010000015.1 RefSeq gene 6657 8243 . + . ID=gene-LDO50_RS02355;Name=LDO50_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02355;old_locus_tag=BVI1335_1110010 NZ_CAJZAO010000015.1 Protein Homology CDS 6657 8243 . + 0 ID=cds-WP_059548687.1;Parent=gene-LDO50_RS02355;Dbxref=GenBank:WP_059548687.1;Name=WP_059548687.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661225.1;locus_tag=LDO50_RS02355;product=ABC transporter substrate-binding protein;protein_id=WP_059548687.1;transl_table=11 NZ_CAJZAO010000015.1 RefSeq gene 8323 9276 . + . ID=gene-LDO50_RS02360;Name=LDO50_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02360;old_locus_tag=BVI1335_1110011 NZ_CAJZAO010000015.1 Protein Homology CDS 8323 9276 . + 0 ID=cds-WP_011880472.1;Parent=gene-LDO50_RS02360;Dbxref=GenBank:WP_011880472.1;Name=WP_011880472.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335753.1;locus_tag=LDO50_RS02360;product=ABC transporter permease;protein_id=WP_011880472.1;transl_table=11 NZ_CAJZAO010000015.1 RefSeq gene 9306 10262 . + . ID=gene-LDO50_RS02365;Name=LDO50_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02365;old_locus_tag=BVI1335_1110012 NZ_CAJZAO010000015.1 Protein Homology CDS 9306 10262 . + 0 ID=cds-WP_014726135.1;Parent=gene-LDO50_RS02365;Dbxref=GenBank:WP_014726135.1;Name=WP_014726135.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726135.1;locus_tag=LDO50_RS02365;product=ABC transporter permease;protein_id=WP_014726135.1;transl_table=11 NZ_CAJZAO010000015.1 RefSeq gene 10262 11626 . + . ID=gene-LDO50_RS31030;Name=LDO50_RS31030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31030;old_locus_tag=BVI1335_1110013 NZ_CAJZAO010000015.1 Protein Homology CDS 10262 11626 . + 0 ID=cds-WP_372586077.1;Parent=gene-LDO50_RS31030;Dbxref=GenBank:WP_372586077.1;Name=WP_372586077.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006049132.1;locus_tag=LDO50_RS31030;product=ATP-binding cassette domain-containing protein;protein_id=WP_372586077.1;transl_table=11 NZ_CAJZAO010000015.1 RefSeq gene 11633 12199 . + . ID=gene-LDO50_RS02380;Name=LDO50_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02380;old_locus_tag=BVI1335_1110014 NZ_CAJZAO010000015.1 Protein Homology CDS 11633 12199 . + 0 ID=cds-WP_011882516.1;Parent=gene-LDO50_RS02380;Dbxref=GenBank:WP_011882516.1;Name=WP_011882516.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882516.1;locus_tag=LDO50_RS02380;product=RNA polymerase sigma factor;protein_id=WP_011882516.1;transl_table=11 NZ_CAJZAO010000015.1 RefSeq gene 12208 12632 . + . ID=gene-LDO50_RS02385;Name=LDO50_RS02385;end_range=12632,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02385;partial=true NZ_CAJZAO010000015.1 Protein Homology CDS 12208 12632 . + 0 ID=cds-WP_224019384.1;Parent=gene-LDO50_RS02385;Dbxref=GenBank:WP_224019384.1;Name=WP_224019384.1;end_range=12632,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882515.1;locus_tag=LDO50_RS02385;partial=true;product=DUF4880 domain-containing protein;protein_id=WP_224019384.1;transl_table=11 ##sequence-region NZ_CAJZAO010000016.1 1 13911 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000016.1 RefSeq region 1 13911 . + . ID=NZ_CAJZAO010000016.1:1..13911;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_112 NZ_CAJZAO010000016.1 RefSeq pseudogene 210 294 . + . ID=gene-LDO50_RS31240;Name=LDO50_RS31240;end_range=294,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31240;partial=true;pseudo=true NZ_CAJZAO010000016.1 Protein Homology CDS 210 294 . + 0 ID=cds-LDO50_RS31240;Parent=gene-LDO50_RS31240;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=294,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011486442.1;locus_tag=LDO50_RS31240;partial=true;product=peptide deformylase;pseudo=true;transl_table=11 NZ_CAJZAO010000016.1 RefSeq gene 305 535 . + . ID=gene-LDO50_RS02390;Name=LDO50_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02390;old_locus_tag=BVI1335_1120002;partial=true;start_range=.,305 NZ_CAJZAO010000016.1 Protein Homology CDS 305 535 . + 0 ID=cds-WP_443797703.1;Parent=gene-LDO50_RS02390;Dbxref=GenBank:WP_443797703.1;Name=WP_443797703.1;Ontology_term=GO:0042586;gbkey=CDS;go_function=peptide deformylase activity|0042586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100727.1;locus_tag=LDO50_RS02390;partial=true;product=peptide deformylase;protein_id=WP_443797703.1;start_range=.,305;transl_table=11 NZ_CAJZAO010000016.1 RefSeq gene 568 1551 . + . ID=gene-LDO50_RS02395;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=LDO50_RS02395;old_locus_tag=BVI1335_1120003 NZ_CAJZAO010000016.1 Protein Homology CDS 568 1551 . + 0 ID=cds-WP_059474633.1;Parent=gene-LDO50_RS02395;Dbxref=GenBank:WP_059474633.1;Name=WP_059474633.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100729.1;locus_tag=LDO50_RS02395;product=methionyl-tRNA formyltransferase;protein_id=WP_059474633.1;transl_table=11 NZ_CAJZAO010000016.1 RefSeq gene 1662 2303 . + . ID=gene-LDO50_RS02400;Name=LDO50_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02400;old_locus_tag=BVI1335_1120005 NZ_CAJZAO010000016.1 Protein Homology CDS 1662 2303 . + 0 ID=cds-WP_059474632.1;Parent=gene-LDO50_RS02400;Dbxref=GenBank:WP_059474632.1;Name=WP_059474632.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414433.1;locus_tag=LDO50_RS02400;product=LysE family translocator;protein_id=WP_059474632.1;transl_table=11 NZ_CAJZAO010000016.1 RefSeq gene 2402 3259 . + . ID=gene-LDO50_RS02405;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=LDO50_RS02405;old_locus_tag=BVI1335_1120006 NZ_CAJZAO010000016.1 Protein Homology CDS 2402 3259 . + 0 ID=cds-WP_011886430.1;Parent=gene-LDO50_RS02405;Dbxref=GenBank:WP_011886430.1;Name=WP_011886430.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007581962.1;locus_tag=LDO50_RS02405;product=zinc metalloprotease HtpX;protein_id=WP_011886430.1;transl_table=11 NZ_CAJZAO010000016.1 RefSeq gene 3475 4863 . + . ID=gene-LDO50_RS02410;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=LDO50_RS02410;old_locus_tag=BVI1335_1120007 NZ_CAJZAO010000016.1 Protein Homology CDS 3475 4863 . + 0 ID=cds-WP_034192454.1;Parent=gene-LDO50_RS02410;Dbxref=GenBank:WP_034192454.1;Name=WP_034192454.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750072.1;locus_tag=LDO50_RS02410;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_034192454.1;transl_table=11 NZ_CAJZAO010000016.1 RefSeq gene 4860 5450 . + . ID=gene-LDO50_RS02415;Name=LDO50_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02415;old_locus_tag=BVI1335_1120008 NZ_CAJZAO010000016.1 Protein Homology CDS 4860 5450 . + 0 ID=cds-WP_011886428.1;Parent=gene-LDO50_RS02415;Dbxref=GenBank:WP_011886428.1;Name=WP_011886428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553747.1;locus_tag=LDO50_RS02415;product=DUF4390 domain-containing protein;protein_id=WP_011886428.1;transl_table=11 NZ_CAJZAO010000016.1 RefSeq gene 5440 7854 . + . ID=gene-LDO50_RS02420;Name=esaS;gbkey=Gene;gene=esaS;gene_biotype=protein_coding;locus_tag=LDO50_RS02420;old_locus_tag=BVI1335_1120009 NZ_CAJZAO010000016.1 Protein Homology CDS 5440 7854 . + 0 ID=cds-WP_011886427.1;Parent=gene-LDO50_RS02420;Dbxref=GenBank:WP_011886427.1;Name=WP_011886427.1;Note=Enhanced Sensitivity to Antibiotics Sensor;gbkey=CDS;gene=esaS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353567.1;locus_tag=LDO50_RS02420;product=sensor histidine kinase EsaS;protein_id=WP_011886427.1;transl_table=11 NZ_CAJZAO010000016.1 RefSeq gene 7855 8556 . + . ID=gene-LDO50_RS02425;Name=esaR;gbkey=Gene;gene=esaR;gene_biotype=protein_coding;locus_tag=LDO50_RS02425;old_locus_tag=BVI1335_1120010 NZ_CAJZAO010000016.1 Protein Homology CDS 7855 8556 . + 0 ID=cds-WP_059474631.1;Parent=gene-LDO50_RS02425;Dbxref=GenBank:WP_059474631.1;Name=WP_059474631.1;gbkey=CDS;gene=esaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009935896.1;locus_tag=LDO50_RS02425;product=response regulator transcription factor EsaR;protein_id=WP_059474631.1;transl_table=11 NZ_CAJZAO010000016.1 RefSeq gene 8618 8693 . + . ID=gene-LDO50_RS02430;Name=LDO50_RS02430;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS02430;old_locus_tag=BVI1335_TRNA11 NZ_CAJZAO010000016.1 tRNAscan-SE tRNA 8618 8693 . + . ID=rna-LDO50_RS02430;Parent=gene-LDO50_RS02430;anticodon=(pos:8651..8653);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS02430;product=tRNA-Phe NZ_CAJZAO010000016.1 tRNAscan-SE exon 8618 8693 . + . ID=exon-LDO50_RS02430-1;Parent=rna-LDO50_RS02430;anticodon=(pos:8651..8653);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS02430;product=tRNA-Phe NZ_CAJZAO010000016.1 RefSeq gene 9045 9779 . + . ID=gene-LDO50_RS02435;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=LDO50_RS02435;old_locus_tag=BVI1335_1120012 NZ_CAJZAO010000016.1 Protein Homology CDS 9045 9779 . + 0 ID=cds-WP_011886353.1;Parent=gene-LDO50_RS02435;Dbxref=GenBank:WP_011886353.1;Name=WP_011886353.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407218.1;locus_tag=LDO50_RS02435;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_011886353.1;transl_table=11 NZ_CAJZAO010000016.1 RefSeq gene 9855 10487 . + . ID=gene-LDO50_RS02440;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=LDO50_RS02440;old_locus_tag=BVI1335_1120013 NZ_CAJZAO010000016.1 Protein Homology CDS 9855 10487 . + 0 ID=cds-WP_011886352.1;Parent=gene-LDO50_RS02440;Dbxref=GenBank:WP_011886352.1;Name=WP_011886352.1;Ontology_term=GO:0006400,GO:0008616,GO:0046872,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007733358.1;locus_tag=LDO50_RS02440;product=7-carboxy-7-deazaguanine synthase;protein_id=WP_011886352.1;transl_table=11 NZ_CAJZAO010000016.1 RefSeq gene 10506 10958 . + . ID=gene-LDO50_RS02445;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=LDO50_RS02445;old_locus_tag=BVI1335_1120014 NZ_CAJZAO010000016.1 Protein Homology CDS 10506 10958 . + 0 ID=cds-WP_011886351.1;Parent=gene-LDO50_RS02445;Dbxref=GenBank:WP_011886351.1;Name=WP_011886351.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482561.1;locus_tag=LDO50_RS02445;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_011886351.1;transl_table=11 NZ_CAJZAO010000016.1 RefSeq gene 11287 12072 . + . ID=gene-LDO50_RS02450;Name=LDO50_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02450;old_locus_tag=BVI1335_1120015 NZ_CAJZAO010000016.1 Protein Homology CDS 11287 12072 . + 0 ID=cds-WP_011886350.1;Parent=gene-LDO50_RS02450;Dbxref=GenBank:WP_011886350.1;Name=WP_011886350.1;Ontology_term=GO:0016830,GO:0046872;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334622.1;locus_tag=LDO50_RS02450;product=HpcH/HpaI aldolase family protein;protein_id=WP_011886350.1;transl_table=11 NZ_CAJZAO010000016.1 RefSeq gene 12207 12923 . + . ID=gene-LDO50_RS02455;Name=LDO50_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02455;old_locus_tag=BVI1335_1120016 NZ_CAJZAO010000016.1 Protein Homology CDS 12207 12923 . + 0 ID=cds-WP_045578683.1;Parent=gene-LDO50_RS02455;Dbxref=GenBank:WP_045578683.1;Name=WP_045578683.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723863.1;locus_tag=LDO50_RS02455;product=tetratricopeptide repeat protein;protein_id=WP_045578683.1;transl_table=11 NZ_CAJZAO010000016.1 RefSeq gene 13023 13911 . - . ID=gene-LDO50_RS02460;Name=rodA;end_range=13911,.;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=LDO50_RS02460;old_locus_tag=BVI1335_1120017;partial=true NZ_CAJZAO010000016.1 Protein Homology CDS 13023 13911 . - 1 ID=cds-WP_224019387.1;Parent=gene-LDO50_RS02460;Dbxref=GenBank:WP_224019387.1;Name=WP_224019387.1;Ontology_term=GO:0008360,GO:0016020;end_range=13911,.;gbkey=CDS;gene=rodA;go_component=membrane|0016020||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525857.1;locus_tag=LDO50_RS02460;partial=true;product=rod shape-determining protein RodA;protein_id=WP_224019387.1;transl_table=11 ##sequence-region NZ_CAJZAO010000017.1 1 4319 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000017.1 RefSeq region 1 4319 . + . ID=NZ_CAJZAO010000017.1:1..4319;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_113 NZ_CAJZAO010000017.1 RefSeq gene 137 427 . - . ID=gene-LDO50_RS02465;Name=LDO50_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02465;old_locus_tag=BVI1335_1130001 NZ_CAJZAO010000017.1 Protein Homology CDS 137 427 . - 0 ID=cds-WP_011886093.1;Parent=gene-LDO50_RS02465;Dbxref=GenBank:WP_011886093.1;Name=WP_011886093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329263.1;locus_tag=LDO50_RS02465;product=YciI family protein;protein_id=WP_011886093.1;transl_table=11 NZ_CAJZAO010000017.1 RefSeq gene 628 2092 . + . ID=gene-LDO50_RS02470;Name=LDO50_RS02470;end_range=2092,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02470;old_locus_tag=BVI1335_1130002;partial=true NZ_CAJZAO010000017.1 Protein Homology CDS 628 2092 . + 0 ID=cds-WP_443797704.1;Parent=gene-LDO50_RS02470;Dbxref=GenBank:WP_443797704.1;Name=WP_443797704.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;end_range=2092,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657996.1;locus_tag=LDO50_RS02470;partial=true;product=methyl-accepting chemotaxis protein;protein_id=WP_443797704.1;transl_table=11 NZ_CAJZAO010000017.1 RefSeq gene 2408 3223 . + . ID=gene-LDO50_RS02475;Name=LDO50_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02475;old_locus_tag=BVI1335_1130003 NZ_CAJZAO010000017.1 Protein Homology CDS 2408 3223 . + 0 ID=cds-WP_011886091.1;Parent=gene-LDO50_RS02475;Dbxref=GenBank:WP_011886091.1;Name=WP_011886091.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763338.1;locus_tag=LDO50_RS02475;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_011886091.1;transl_table=11 NZ_CAJZAO010000017.1 RefSeq gene 3428 4135 . + . ID=gene-LDO50_RS02480;Name=imuA;gbkey=Gene;gene=imuA;gene_biotype=protein_coding;locus_tag=LDO50_RS02480;old_locus_tag=BVI1335_1130004 NZ_CAJZAO010000017.1 Protein Homology CDS 3428 4135 . + 0 ID=cds-WP_011886090.1;Parent=gene-LDO50_RS02480;Dbxref=GenBank:WP_011886090.1;Name=WP_011886090.1;Ontology_term=GO:0009432,GO:0051782;gbkey=CDS;gene=imuA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195290.1;locus_tag=LDO50_RS02480;product=translesion DNA synthesis-associated protein ImuA;protein_id=WP_011886090.1;transl_table=11 NZ_CAJZAO010000017.1 RefSeq pseudogene 4068 4319 . + . ID=gene-LDO50_RS02485;Name=LDO50_RS02485;end_range=4319,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS02485;partial=true;pseudo=true NZ_CAJZAO010000017.1 Protein Homology CDS 4068 4319 . + 0 ID=cds-LDO50_RS02485;Parent=gene-LDO50_RS02485;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4319,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011807615.1;locus_tag=LDO50_RS02485;partial=true;product=DNA polymerase Y family protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000018.1 1 65792 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000018.1 RefSeq region 1 65792 . + . ID=NZ_CAJZAO010000018.1:1..65792;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_114 NZ_CAJZAO010000018.1 RefSeq gene 1 391 . - . ID=gene-LDO50_RS02490;Name=LDO50_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02490;partial=true;start_range=.,1 NZ_CAJZAO010000018.1 Protein Homology CDS 1 391 . - 0 ID=cds-WP_224019388.1;Parent=gene-LDO50_RS02490;Dbxref=GenBank:WP_224019388.1;Name=WP_224019388.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332641.1;locus_tag=LDO50_RS02490;partial=true;product=MFS transporter;protein_id=WP_224019388.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 944 1276 . + . ID=gene-LDO50_RS02495;Name=LDO50_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02495;old_locus_tag=BVI1335_1140002 NZ_CAJZAO010000018.1 Protein Homology CDS 944 1276 . + 0 ID=cds-WP_011884266.1;Parent=gene-LDO50_RS02495;Dbxref=GenBank:WP_011884266.1;Name=WP_011884266.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656489.1;locus_tag=LDO50_RS02495;product=YnfA family protein;protein_id=WP_011884266.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 1311 2045 . - . ID=gene-LDO50_RS02500;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=LDO50_RS02500;old_locus_tag=BVI1335_1140003 NZ_CAJZAO010000018.1 Protein Homology CDS 1311 2045 . - 0 ID=cds-WP_011884267.1;Parent=gene-LDO50_RS02500;Dbxref=GenBank:WP_011884267.1;Name=WP_011884267.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656490.1;locus_tag=LDO50_RS02500;product=DNA polymerase III subunit epsilon;protein_id=WP_011884267.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 2084 2527 . - . ID=gene-LDO50_RS02505;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=LDO50_RS02505;old_locus_tag=BVI1335_1140004 NZ_CAJZAO010000018.1 Protein Homology CDS 2084 2527 . - 0 ID=cds-WP_011884268.1;Parent=gene-LDO50_RS02505;Dbxref=GenBank:WP_011884268.1;Name=WP_011884268.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764660.1;locus_tag=LDO50_RS02505;product=ribonuclease HI;protein_id=WP_011884268.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 2524 3336 . - . ID=gene-LDO50_RS02510;Name=LDO50_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02510;old_locus_tag=BVI1335_1140005 NZ_CAJZAO010000018.1 Protein Homology CDS 2524 3336 . - 0 ID=cds-WP_011884269.1;Parent=gene-LDO50_RS02510;Dbxref=GenBank:WP_011884269.1;Name=WP_011884269.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004556858.1;locus_tag=LDO50_RS02510;product=class I SAM-dependent methyltransferase;protein_id=WP_011884269.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 3355 4161 . + . ID=gene-LDO50_RS02515;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=LDO50_RS02515;old_locus_tag=BVI1335_1140006 NZ_CAJZAO010000018.1 Protein Homology CDS 3355 4161 . + 0 ID=cds-WP_011884270.1;Parent=gene-LDO50_RS02515;Dbxref=GenBank:WP_011884270.1;Name=WP_011884270.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600438.1;locus_tag=LDO50_RS02515;product=hydroxyacylglutathione hydrolase;protein_id=WP_011884270.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 4313 5884 . + . ID=gene-LDO50_RS02520;Name=LDO50_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02520;old_locus_tag=BVI1335_1140007 NZ_CAJZAO010000018.1 Protein Homology CDS 4313 5884 . + 0 ID=cds-WP_011884271.1;Parent=gene-LDO50_RS02520;Dbxref=GenBank:WP_011884271.1;Name=WP_011884271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694247.1;locus_tag=LDO50_RS02520;product=transglycosylase SLT domain-containing protein;protein_id=WP_011884271.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 6063 7295 . + . ID=gene-LDO50_RS02525;Name=LDO50_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02525;old_locus_tag=BVI1335_1140008 NZ_CAJZAO010000018.1 Protein Homology CDS 6063 7295 . + 0 ID=cds-WP_045579269.1;Parent=gene-LDO50_RS02525;Dbxref=GenBank:WP_045579269.1;Name=WP_045579269.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897435.1;locus_tag=LDO50_RS02525;product=MFS transporter;protein_id=WP_045579269.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 7655 8800 . + . ID=gene-LDO50_RS02530;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=LDO50_RS02530;old_locus_tag=BVI1335_1140011 NZ_CAJZAO010000018.1 Protein Homology CDS 7655 8800 . + 0 ID=cds-WP_011884273.1;Parent=gene-LDO50_RS02530;Dbxref=GenBank:WP_011884273.1;Name=WP_011884273.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697358.1;locus_tag=LDO50_RS02530;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_011884273.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 8847 9527 . + . ID=gene-LDO50_RS02535;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=LDO50_RS02535;old_locus_tag=BVI1335_1140012 NZ_CAJZAO010000018.1 Protein Homology CDS 8847 9527 . + 0 ID=cds-WP_059462292.1;Parent=gene-LDO50_RS02535;Dbxref=GenBank:WP_059462292.1;Name=WP_059462292.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192135.1;locus_tag=LDO50_RS02535;product=leucine efflux protein LeuE;protein_id=WP_059462292.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 9577 12831 . + . ID=gene-LDO50_RS02540;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=LDO50_RS02540;old_locus_tag=BVI1335_1140013 NZ_CAJZAO010000018.1 Protein Homology CDS 9577 12831 . + 0 ID=cds-WP_011884275.1;Parent=gene-LDO50_RS02540;Dbxref=GenBank:WP_011884275.1;Name=WP_011884275.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193866.1;locus_tag=LDO50_RS02540;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_011884275.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 12950 13426 . + . ID=gene-LDO50_RS02545;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=LDO50_RS02545;old_locus_tag=BVI1335_1140014 NZ_CAJZAO010000018.1 Protein Homology CDS 12950 13426 . + 0 ID=cds-WP_011884276.1;Parent=gene-LDO50_RS02545;Dbxref=GenBank:WP_011884276.1;Name=WP_011884276.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534614.1;locus_tag=LDO50_RS02545;product=transcription elongation factor GreA;protein_id=WP_011884276.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 13441 13899 . + . ID=gene-LDO50_RS02550;Name=LDO50_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02550;old_locus_tag=BVI1335_1140015 NZ_CAJZAO010000018.1 Protein Homology CDS 13441 13899 . + 0 ID=cds-WP_011884277.1;Parent=gene-LDO50_RS02550;Dbxref=GenBank:WP_011884277.1;Name=WP_011884277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213687.1;locus_tag=LDO50_RS02550;product=DUF4149 domain-containing protein;protein_id=WP_011884277.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 13957 14481 . - . ID=gene-LDO50_RS02555;Name=LDO50_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02555;old_locus_tag=BVI1335_1140017 NZ_CAJZAO010000018.1 Protein Homology CDS 13957 14481 . - 0 ID=cds-WP_011884278.1;Parent=gene-LDO50_RS02555;Dbxref=GenBank:WP_011884278.1;Name=WP_011884278.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363551.1;locus_tag=LDO50_RS02555;product=YhbY family RNA-binding protein;protein_id=WP_011884278.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 14675 15337 . + . ID=gene-LDO50_RS02560;Name=LDO50_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02560;old_locus_tag=BVI1335_1140018 NZ_CAJZAO010000018.1 Protein Homology CDS 14675 15337 . + 0 ID=cds-WP_011884279.1;Parent=gene-LDO50_RS02560;Dbxref=GenBank:WP_011884279.1;Name=WP_011884279.1;Ontology_term=GO:0001510,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009911930.1;locus_tag=LDO50_RS02560;product=RlmE family RNA methyltransferase;protein_id=WP_011884279.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 15504 17399 . + . ID=gene-LDO50_RS02565;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=LDO50_RS02565;old_locus_tag=BVI1335_1140020 NZ_CAJZAO010000018.1 Protein Homology CDS 15504 17399 . + 0 ID=cds-WP_011884280.1;Parent=gene-LDO50_RS02565;Dbxref=GenBank:WP_011884280.1;Name=WP_011884280.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656500.1;locus_tag=LDO50_RS02565;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_011884280.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 17476 18369 . + . ID=gene-LDO50_RS02570;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=LDO50_RS02570;old_locus_tag=BVI1335_1140022 NZ_CAJZAO010000018.1 Protein Homology CDS 17476 18369 . + 0 ID=cds-WP_034193246.1;Parent=gene-LDO50_RS02570;Dbxref=GenBank:WP_034193246.1;Name=WP_034193246.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405091.1;locus_tag=LDO50_RS02570;product=dihydropteroate synthase;protein_id=WP_034193246.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 18406 19761 . + . ID=gene-LDO50_RS02575;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=LDO50_RS02575;old_locus_tag=BVI1335_1140023 NZ_CAJZAO010000018.1 Protein Homology CDS 18406 19761 . + 0 ID=cds-WP_224019390.1;Parent=gene-LDO50_RS02575;Dbxref=GenBank:WP_224019390.1;Name=WP_224019390.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004542480.1;locus_tag=LDO50_RS02575;product=phosphoglucosamine mutase;protein_id=WP_224019390.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 20208 21242 . + . ID=gene-LDO50_RS02580;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=LDO50_RS02580;old_locus_tag=BVI1335_1140025 NZ_CAJZAO010000018.1 Protein Homology CDS 20208 21242 . + 0 ID=cds-WP_014722815.1;Parent=gene-LDO50_RS02580;Dbxref=GenBank:WP_014722815.1;Name=WP_014722815.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363555.1;locus_tag=LDO50_RS02580;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_014722815.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 21338 22324 . + . ID=gene-LDO50_RS02585;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=LDO50_RS02585;old_locus_tag=BVI1335_1140026 NZ_CAJZAO010000018.1 Protein Homology CDS 21338 22324 . + 0 ID=cds-WP_069246201.1;Parent=gene-LDO50_RS02585;Dbxref=GenBank:WP_069246201.1;Name=WP_069246201.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417346.1;locus_tag=LDO50_RS02585;product=phosphate ABC transporter permease PstC;protein_id=WP_069246201.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 22321 23214 . + . ID=gene-LDO50_RS02590;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=LDO50_RS02590;old_locus_tag=BVI1335_1140027 NZ_CAJZAO010000018.1 Protein Homology CDS 22321 23214 . + 0 ID=cds-WP_011884285.1;Parent=gene-LDO50_RS02590;Dbxref=GenBank:WP_011884285.1;Name=WP_011884285.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906011.1;locus_tag=LDO50_RS02590;product=phosphate ABC transporter permease PstA;protein_id=WP_011884285.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 23230 24078 . + . ID=gene-LDO50_RS02595;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=LDO50_RS02595;old_locus_tag=BVI1335_1140029 NZ_CAJZAO010000018.1 Protein Homology CDS 23230 24078 . + 0 ID=cds-WP_011884286.1;Parent=gene-LDO50_RS02595;Dbxref=GenBank:WP_011884286.1;Name=WP_011884286.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401039.1;locus_tag=LDO50_RS02595;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_011884286.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 24097 24801 . + . ID=gene-LDO50_RS02600;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=LDO50_RS02600;old_locus_tag=BVI1335_1140030 NZ_CAJZAO010000018.1 Protein Homology CDS 24097 24801 . + 0 ID=cds-WP_011884287.1;Parent=gene-LDO50_RS02600;Dbxref=GenBank:WP_011884287.1;Name=WP_011884287.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351613.1;locus_tag=LDO50_RS02600;product=phosphate signaling complex protein PhoU;protein_id=WP_011884287.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 24833 25534 . + . ID=gene-LDO50_RS02605;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=LDO50_RS02605;old_locus_tag=BVI1335_1140031 NZ_CAJZAO010000018.1 Protein Homology CDS 24833 25534 . + 0 ID=cds-WP_006750313.1;Parent=gene-LDO50_RS02605;Dbxref=GenBank:WP_006750313.1;Name=WP_006750313.1;Ontology_term=GO:0000160,GO:0006355,GO:0006817,GO:0000156,GO:0003677;gbkey=CDS;gene=phoB;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332664.1;locus_tag=LDO50_RS02605;product=phosphate regulon transcriptional regulator PhoB;protein_id=WP_006750313.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 25592 26911 . + . ID=gene-LDO50_RS02610;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=LDO50_RS02610;old_locus_tag=BVI1335_1140032 NZ_CAJZAO010000018.1 Protein Homology CDS 25592 26911 . + 0 ID=cds-WP_011884288.1;Parent=gene-LDO50_RS02610;Dbxref=GenBank:WP_011884288.1;Name=WP_011884288.1;Ontology_term=GO:0000160,GO:0006796,GO:0006817,GO:0000155;gbkey=CDS;gene=phoR;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphate-containing compound metabolic process|0006796||IEA,phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332665.1;locus_tag=LDO50_RS02610;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_011884288.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 27029 29092 . - . ID=gene-LDO50_RS02615;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=LDO50_RS02615;old_locus_tag=BVI1335_1140033 NZ_CAJZAO010000018.1 Protein Homology CDS 27029 29092 . - 0 ID=cds-WP_011884289.1;Parent=gene-LDO50_RS02615;Dbxref=GenBank:WP_011884289.1;Name=WP_011884289.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041492798.1;locus_tag=LDO50_RS02615;product=polyphosphate kinase 1;protein_id=WP_011884289.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 29376 30890 . + . ID=gene-LDO50_RS02620;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=LDO50_RS02620;old_locus_tag=BVI1335_1140035 NZ_CAJZAO010000018.1 Protein Homology CDS 29376 30890 . + 0 ID=cds-WP_011884290.1;Parent=gene-LDO50_RS02620;Dbxref=GenBank:WP_011884290.1;Name=WP_011884290.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009970405.1;locus_tag=LDO50_RS02620;product=exopolyphosphatase;protein_id=WP_011884290.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 30963 31397 . - . ID=gene-LDO50_RS02625;Name=LDO50_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02625;old_locus_tag=BVI1335_1140036 NZ_CAJZAO010000018.1 Protein Homology CDS 30963 31397 . - 0 ID=cds-WP_011884291.1;Parent=gene-LDO50_RS02625;Dbxref=GenBank:WP_011884291.1;Name=WP_011884291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884291.1;locus_tag=LDO50_RS02625;product=hypothetical protein;protein_id=WP_011884291.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 31540 31616 . - . ID=gene-LDO50_RS02630;Name=LDO50_RS02630;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS02630;old_locus_tag=BVI1335_TRNA27 NZ_CAJZAO010000018.1 tRNAscan-SE tRNA 31540 31616 . - . ID=rna-LDO50_RS02630;Parent=gene-LDO50_RS02630;anticodon=(pos:complement(31580..31582));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS02630;product=tRNA-Pro NZ_CAJZAO010000018.1 tRNAscan-SE exon 31540 31616 . - . ID=exon-LDO50_RS02630-1;Parent=rna-LDO50_RS02630;anticodon=(pos:complement(31580..31582));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS02630;product=tRNA-Pro NZ_CAJZAO010000018.1 RefSeq gene 31778 32239 . + . ID=gene-LDO50_RS02635;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=LDO50_RS02635;old_locus_tag=BVI1335_1140037 NZ_CAJZAO010000018.1 Protein Homology CDS 31778 32239 . + 0 ID=cds-WP_011884302.1;Parent=gene-LDO50_RS02635;Dbxref=GenBank:WP_011884302.1;Name=WP_011884302.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: protein motif:HMM:TIGR00249.1;locus_tag=LDO50_RS02635;product=phosphohistidine phosphatase SixA;protein_id=WP_011884302.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 32400 33206 . + . ID=gene-LDO50_RS02640;Name=LDO50_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02640;old_locus_tag=BVI1335_1140038 NZ_CAJZAO010000018.1 Protein Homology CDS 32400 33206 . + 0 ID=cds-WP_011884303.1;Parent=gene-LDO50_RS02640;Dbxref=GenBank:WP_011884303.1;Name=WP_011884303.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092640.1;locus_tag=LDO50_RS02640;product=GNAT family N-acetyltransferase;protein_id=WP_011884303.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 33383 33553 . - . ID=gene-LDO50_RS02645;Name=LDO50_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02645;old_locus_tag=BVI1335_1140039 NZ_CAJZAO010000018.1 Protein Homology CDS 33383 33553 . - 0 ID=cds-WP_011884304.1;Parent=gene-LDO50_RS02645;Dbxref=GenBank:WP_011884304.1;Name=WP_011884304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191316.1;locus_tag=LDO50_RS02645;product=hypothetical protein;protein_id=WP_011884304.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 33689 33874 . + . ID=gene-LDO50_RS02650;Name=LDO50_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02650;old_locus_tag=BVI1335_1140040 NZ_CAJZAO010000018.1 Protein Homology CDS 33689 33874 . + 0 ID=cds-WP_011884305.1;Parent=gene-LDO50_RS02650;Dbxref=GenBank:WP_011884305.1;Name=WP_011884305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884305.1;locus_tag=LDO50_RS02650;product=hypothetical protein;protein_id=WP_011884305.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 33891 35261 . - . ID=gene-LDO50_RS02655;Name=LDO50_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02655;old_locus_tag=BVI1335_1140041 NZ_CAJZAO010000018.1 Protein Homology CDS 33891 35261 . - 0 ID=cds-WP_045579265.1;Parent=gene-LDO50_RS02655;Dbxref=GenBank:WP_045579265.1;Name=WP_045579265.1;Ontology_term=GO:0006855,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884306.1;locus_tag=LDO50_RS02655;product=MATE family efflux transporter;protein_id=WP_045579265.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 35272 35595 . - . ID=gene-LDO50_RS02660;Name=LDO50_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02660;old_locus_tag=BVI1335_1140042 NZ_CAJZAO010000018.1 Protein Homology CDS 35272 35595 . - 0 ID=cds-WP_034193252.1;Parent=gene-LDO50_RS02660;Dbxref=GenBank:WP_034193252.1;Name=WP_034193252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405071.1;locus_tag=LDO50_RS02660;product=DUF2288 domain-containing protein;protein_id=WP_034193252.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 36445 37143 . - . ID=gene-LDO50_RS02665;Name=LDO50_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02665;old_locus_tag=BVI1335_1140045 NZ_CAJZAO010000018.1 Protein Homology CDS 36445 37143 . - 0 ID=cds-WP_014722823.1;Parent=gene-LDO50_RS02665;Dbxref=GenBank:WP_014722823.1;Name=WP_014722823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417339.1;locus_tag=LDO50_RS02665;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_014722823.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 37274 38188 . - . ID=gene-LDO50_RS02670;Name=LDO50_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02670;old_locus_tag=BVI1335_1140046 NZ_CAJZAO010000018.1 Protein Homology CDS 37274 38188 . - 0 ID=cds-WP_059475295.1;Parent=gene-LDO50_RS02670;Dbxref=GenBank:WP_059475295.1;Name=WP_059475295.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545101.1;locus_tag=LDO50_RS02670;product=aldose epimerase family protein;protein_id=WP_059475295.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 38671 39501 . + . ID=gene-LDO50_RS02675;Name=LDO50_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02675;old_locus_tag=BVI1335_1140047 NZ_CAJZAO010000018.1 Protein Homology CDS 38671 39501 . + 0 ID=cds-WP_011884310.1;Parent=gene-LDO50_RS02675;Dbxref=GenBank:WP_011884310.1;Name=WP_011884310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545102.1;locus_tag=LDO50_RS02675;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_011884310.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 39681 39757 . + . ID=gene-LDO50_RS02680;Name=LDO50_RS02680;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS02680;old_locus_tag=BVI1335_TRNA12 NZ_CAJZAO010000018.1 tRNAscan-SE tRNA 39681 39757 . + . ID=rna-LDO50_RS02680;Parent=gene-LDO50_RS02680;anticodon=(pos:39715..39717);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS02680;product=tRNA-Arg NZ_CAJZAO010000018.1 tRNAscan-SE exon 39681 39757 . + . ID=exon-LDO50_RS02680-1;Parent=rna-LDO50_RS02680;anticodon=(pos:39715..39717);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS02680;product=tRNA-Arg NZ_CAJZAO010000018.1 RefSeq gene 40159 40743 . - . ID=gene-LDO50_RS02685;Name=LDO50_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02685;old_locus_tag=BVI1335_1140049 NZ_CAJZAO010000018.1 Protein Homology CDS 40159 40743 . - 0 ID=cds-WP_224019392.1;Parent=gene-LDO50_RS02685;Dbxref=GenBank:WP_224019392.1;Name=WP_224019392.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884359.1;locus_tag=LDO50_RS02685;product=helix-turn-helix domain-containing protein;protein_id=WP_224019392.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 41142 42203 . + . ID=gene-LDO50_RS02690;Name=LDO50_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02690;old_locus_tag=BVI1335_1140050 NZ_CAJZAO010000018.1 Protein Homology CDS 41142 42203 . + 0 ID=cds-WP_069224080.1;Parent=gene-LDO50_RS02690;Dbxref=GenBank:WP_069224080.1;Name=WP_069224080.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722826.1;locus_tag=LDO50_RS02690;product=helix-turn-helix transcriptional regulator;protein_id=WP_069224080.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 42293 42835 . - . ID=gene-LDO50_RS02695;Name=LDO50_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02695;old_locus_tag=BVI1335_1140051 NZ_CAJZAO010000018.1 Protein Homology CDS 42293 42835 . - 0 ID=cds-WP_224019393.1;Parent=gene-LDO50_RS02695;Dbxref=GenBank:WP_224019393.1;Name=WP_224019393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884361.1;locus_tag=LDO50_RS02695;product=hypothetical protein;protein_id=WP_224019393.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 43035 44318 . - . ID=gene-LDO50_RS02700;Name=LDO50_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02700;old_locus_tag=BVI1335_1140052 NZ_CAJZAO010000018.1 Protein Homology CDS 43035 44318 . - 0 ID=cds-WP_224019394.1;Parent=gene-LDO50_RS02700;Dbxref=GenBank:WP_224019394.1;Name=WP_224019394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884362.1;locus_tag=LDO50_RS02700;product=ATP-binding protein;protein_id=WP_224019394.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 44319 45047 . - . ID=gene-LDO50_RS02705;Name=LDO50_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02705;old_locus_tag=BVI1335_1140053 NZ_CAJZAO010000018.1 Protein Homology CDS 44319 45047 . - 0 ID=cds-WP_011884363.1;Parent=gene-LDO50_RS02705;Dbxref=GenBank:WP_011884363.1;Name=WP_011884363.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523775.1;locus_tag=LDO50_RS02705;product=response regulator;protein_id=WP_011884363.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 45290 46036 . + . ID=gene-LDO50_RS02710;Name=LDO50_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02710;old_locus_tag=BVI1335_1140054 NZ_CAJZAO010000018.1 Protein Homology CDS 45290 46036 . + 0 ID=cds-WP_176321527.1;Parent=gene-LDO50_RS02710;Dbxref=GenBank:WP_176321527.1;Name=WP_176321527.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897364.1;locus_tag=LDO50_RS02710;product=MipA/OmpV family protein;protein_id=WP_176321527.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 46130 46465 . + . ID=gene-LDO50_RS02715;Name=LDO50_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02715;old_locus_tag=BVI1335_1140055 NZ_CAJZAO010000018.1 Protein Homology CDS 46130 46465 . + 0 ID=cds-WP_224019395.1;Parent=gene-LDO50_RS02715;Dbxref=GenBank:WP_224019395.1;Name=WP_224019395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492516.1;locus_tag=LDO50_RS02715;product=hypothetical protein;protein_id=WP_224019395.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 46542 47741 . - . ID=gene-LDO50_RS02720;Name=LDO50_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02720;old_locus_tag=BVI1335_1140057 NZ_CAJZAO010000018.1 Protein Homology CDS 46542 47741 . - 0 ID=cds-WP_043290980.1;Parent=gene-LDO50_RS02720;Dbxref=GenBank:WP_043290980.1;Name=WP_043290980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490616.1;locus_tag=LDO50_RS02720;product=lytic transglycosylase domain-containing protein;protein_id=WP_043290980.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 48157 49317 . - . ID=gene-LDO50_RS02725;Name=LDO50_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02725;old_locus_tag=BVI1335_1140059 NZ_CAJZAO010000018.1 Protein Homology CDS 48157 49317 . - 0 ID=cds-WP_224019396.1;Parent=gene-LDO50_RS02725;Dbxref=GenBank:WP_224019396.1;Name=WP_224019396.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884367.1;locus_tag=LDO50_RS02725;product=porin;protein_id=WP_224019396.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq pseudogene 49719 50428 . + . ID=gene-LDO50_RS02730;Name=LDO50_RS02730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS02730;pseudo=true NZ_CAJZAO010000018.1 Protein Homology CDS 49719 50428 . + 0 ID=cds-LDO50_RS02730;Parent=gene-LDO50_RS02730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481846.1;locus_tag=LDO50_RS02730;product=topoisomerase IV;pseudo=true;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 50483 51412 . - . ID=gene-LDO50_RS02735;Name=LDO50_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02735;old_locus_tag=BVI1335_1140062 NZ_CAJZAO010000018.1 Protein Homology CDS 50483 51412 . - 0 ID=cds-WP_011884369.1;Parent=gene-LDO50_RS02735;Dbxref=GenBank:WP_011884369.1;Name=WP_011884369.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332728.1;locus_tag=LDO50_RS02735;product=phosphatidate cytidylyltransferase;protein_id=WP_011884369.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 51449 52081 . - . ID=gene-LDO50_RS02740;Name=LDO50_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02740;old_locus_tag=BVI1335_1140063 NZ_CAJZAO010000018.1 Protein Homology CDS 51449 52081 . - 0 ID=cds-WP_011884370.1;Parent=gene-LDO50_RS02740;Dbxref=GenBank:WP_011884370.1;Name=WP_011884370.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481857.1;locus_tag=LDO50_RS02740;product=lysophospholipid acyltransferase family protein;protein_id=WP_011884370.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 52074 52454 . + . ID=gene-LDO50_RS02745;Name=LDO50_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02745 NZ_CAJZAO010000018.1 GeneMarkS-2+ CDS 52074 52454 . + 0 ID=cds-WP_155625344.1;Parent=gene-LDO50_RS02745;Dbxref=GenBank:WP_155625344.1;Name=WP_155625344.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS02745;product=hypothetical protein;protein_id=WP_155625344.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 52534 53139 . + . ID=gene-LDO50_RS02750;Name=LDO50_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02750;old_locus_tag=BVI1335_1140064 NZ_CAJZAO010000018.1 Protein Homology CDS 52534 53139 . + 0 ID=cds-WP_045579248.1;Parent=gene-LDO50_RS02750;Dbxref=GenBank:WP_045579248.1;Name=WP_045579248.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332730.1;locus_tag=LDO50_RS02750;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_045579248.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 53230 54999 . + . ID=gene-LDO50_RS02755;Name=LDO50_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02755;old_locus_tag=BVI1335_1140065 NZ_CAJZAO010000018.1 Protein Homology CDS 53230 54999 . + 0 ID=cds-WP_045579247.1;Parent=gene-LDO50_RS02755;Dbxref=GenBank:WP_045579247.1;Name=WP_045579247.1;Ontology_term=GO:0008168,GO:0016787,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,hydrolase activity|0016787||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884372.1;locus_tag=LDO50_RS02755;product=bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase;protein_id=WP_045579247.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 54996 55967 . + . ID=gene-LDO50_RS02760;Name=LDO50_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02760;old_locus_tag=BVI1335_1140066 NZ_CAJZAO010000018.1 Protein Homology CDS 54996 55967 . + 0 ID=cds-WP_224019397.1;Parent=gene-LDO50_RS02760;Dbxref=GenBank:WP_224019397.1;Name=WP_224019397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006156282.1;locus_tag=LDO50_RS02760;product=phosphatase PAP2 family protein;protein_id=WP_224019397.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 56099 57601 . + . ID=gene-LDO50_RS02765;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=LDO50_RS02765;old_locus_tag=BVI1335_1140067 NZ_CAJZAO010000018.1 Protein Homology CDS 56099 57601 . + 0 ID=cds-WP_034192688.1;Parent=gene-LDO50_RS02765;Dbxref=GenBank:WP_034192688.1;Name=WP_034192688.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896124.1;locus_tag=LDO50_RS02765;product=glycerol kinase GlpK;protein_id=WP_034192688.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 57694 58410 . + . ID=gene-LDO50_RS02770;Name=LDO50_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02770;old_locus_tag=BVI1335_1140068 NZ_CAJZAO010000018.1 Protein Homology CDS 57694 58410 . + 0 ID=cds-WP_011885954.1;Parent=gene-LDO50_RS02770;Dbxref=GenBank:WP_011885954.1;Name=WP_011885954.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757965.1;locus_tag=LDO50_RS02770;product=MIP/aquaporin family protein;protein_id=WP_011885954.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 58780 59466 . + . ID=gene-LDO50_RS02775;Name=LDO50_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02775;old_locus_tag=BVI1335_1140069 NZ_CAJZAO010000018.1 Protein Homology CDS 58780 59466 . + 0 ID=cds-WP_011885955.1;Parent=gene-LDO50_RS02775;Dbxref=GenBank:WP_011885955.1;Name=WP_011885955.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526142.1;locus_tag=LDO50_RS02775;product=HAD family hydrolase;protein_id=WP_011885955.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 59555 60265 . - . ID=gene-LDO50_RS02780;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=LDO50_RS02780;old_locus_tag=BVI1335_1140071 NZ_CAJZAO010000018.1 Protein Homology CDS 59555 60265 . - 0 ID=cds-WP_060091508.1;Parent=gene-LDO50_RS02780;Dbxref=GenBank:WP_060091508.1;Name=WP_060091508.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489272.1;locus_tag=LDO50_RS02780;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_060091508.1;transl_table=11 NZ_CAJZAO010000018.1 cmsearch riboswitch 60384 60532 . - . ID=id-NZ_CAJZAO010000018.1:60384..60532;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAO010000018.1 RefSeq gene 60697 61389 . - . ID=gene-LDO50_RS02785;Name=LDO50_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02785;old_locus_tag=BVI1335_1140072 NZ_CAJZAO010000018.1 Protein Homology CDS 60697 61389 . - 0 ID=cds-WP_011885957.1;Parent=gene-LDO50_RS02785;Dbxref=GenBank:WP_011885957.1;Name=WP_011885957.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885957.1;locus_tag=LDO50_RS02785;product=helix-turn-helix domain-containing protein;protein_id=WP_011885957.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 61794 63167 . + . ID=gene-LDO50_RS02790;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=LDO50_RS02790;old_locus_tag=BVI1335_1140073 NZ_CAJZAO010000018.1 Protein Homology CDS 61794 63167 . + 0 ID=cds-WP_059549201.1;Parent=gene-LDO50_RS02790;Dbxref=GenBank:WP_059549201.1;Name=WP_059549201.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896118.1;locus_tag=LDO50_RS02790;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_059549201.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 63201 64247 . + . ID=gene-LDO50_RS02795;Name=LDO50_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02795;old_locus_tag=BVI1335_1140074 NZ_CAJZAO010000018.1 Protein Homology CDS 63201 64247 . + 0 ID=cds-WP_011885959.1;Parent=gene-LDO50_RS02795;Dbxref=GenBank:WP_011885959.1;Name=WP_011885959.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885959.1;locus_tag=LDO50_RS02795;product=PhoH family protein;protein_id=WP_011885959.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 64420 65196 . + . ID=gene-LDO50_RS02800;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=LDO50_RS02800;old_locus_tag=BVI1335_1140075 NZ_CAJZAO010000018.1 Protein Homology CDS 64420 65196 . + 0 ID=cds-WP_011885960.1;Parent=gene-LDO50_RS02800;Dbxref=GenBank:WP_011885960.1;Name=WP_011885960.1;gbkey=CDS;gene=ybeY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755526.1;locus_tag=LDO50_RS02800;product=rRNA maturation RNase YbeY;protein_id=WP_011885960.1;transl_table=11 NZ_CAJZAO010000018.1 RefSeq gene 65211 65792 . + . ID=gene-LDO50_RS02805;Name=LDO50_RS02805;end_range=65792,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02805;partial=true NZ_CAJZAO010000018.1 Protein Homology CDS 65211 65792 . + 0 ID=cds-WP_224019398.1;Parent=gene-LDO50_RS02805;Dbxref=GenBank:WP_224019398.1;Name=WP_224019398.1;Ontology_term=GO:0006751,GO:0061928;end_range=65792,.;gbkey=CDS;go_function=glutathione specific gamma-glutamylcyclotransferase activity|0061928||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486595.1;locus_tag=LDO50_RS02805;partial=true;product=gamma-glutamylcyclotransferase;protein_id=WP_224019398.1;transl_table=11 ##sequence-region NZ_CAJZAO010000019.1 1 22447 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000019.1 RefSeq region 1 22447 . + . ID=NZ_CAJZAO010000019.1:1..22447;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_115 NZ_CAJZAO010000019.1 RefSeq gene 1 830 . + . ID=gene-LDO50_RS02810;Name=LDO50_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02810;old_locus_tag=BVI1335_1150001;partial=true;start_range=.,1 NZ_CAJZAO010000019.1 Protein Homology CDS 1 830 . + 2 ID=cds-WP_224019399.1;Parent=gene-LDO50_RS02810;Dbxref=GenBank:WP_224019399.1;Name=WP_224019399.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725851.1;locus_tag=LDO50_RS02810;partial=true;product=Hsp70 family protein;protein_id=WP_224019399.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 850 1185 . + . ID=gene-LDO50_RS02815;Name=LDO50_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02815;old_locus_tag=BVI1335_1150002 NZ_CAJZAO010000019.1 Protein Homology CDS 850 1185 . + 0 ID=cds-WP_059457526.1;Parent=gene-LDO50_RS02815;Dbxref=GenBank:WP_059457526.1;Name=WP_059457526.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880119.1;locus_tag=LDO50_RS02815;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_059457526.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 1493 2629 . + . ID=gene-LDO50_RS02820;Name=nifV;gbkey=Gene;gene=nifV;gene_biotype=protein_coding;locus_tag=LDO50_RS02820;old_locus_tag=BVI1335_1150003 NZ_CAJZAO010000019.1 Protein Homology CDS 1493 2629 . + 0 ID=cds-WP_224019400.1;Parent=gene-LDO50_RS02820;Dbxref=GenBank:WP_224019400.1;Name=WP_224019400.1;Ontology_term=GO:0004410;gbkey=CDS;gene=nifV;go_function=homocitrate synthase activity|0004410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018423206.1;locus_tag=LDO50_RS02820;product=homocitrate synthase;protein_id=WP_224019400.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 2626 3420 . + . ID=gene-LDO50_RS02825;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=LDO50_RS02825;old_locus_tag=BVI1335_1150004 NZ_CAJZAO010000019.1 Protein Homology CDS 2626 3420 . + 0 ID=cds-WP_043292770.1;Parent=gene-LDO50_RS02825;Dbxref=GenBank:WP_043292770.1;Name=WP_043292770.1;Ontology_term=GO:0006535,GO:0009001,GO:0005737;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||IEA;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725848.1;locus_tag=LDO50_RS02825;product=serine O-acetyltransferase;protein_id=WP_043292770.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 3427 3765 . + . ID=gene-LDO50_RS02830;Name=nifW;gbkey=Gene;gene=nifW;gene_biotype=protein_coding;locus_tag=LDO50_RS02830;old_locus_tag=BVI1335_1150006 NZ_CAJZAO010000019.1 Protein Homology CDS 3427 3765 . + 0 ID=cds-WP_014725847.1;Parent=gene-LDO50_RS02830;Dbxref=GenBank:WP_014725847.1;Name=WP_014725847.1;gbkey=CDS;gene=nifW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725847.1;locus_tag=LDO50_RS02830;product=nitrogenase stabilizing/protective protein NifW;protein_id=WP_014725847.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 3780 4628 . + . ID=gene-LDO50_RS02835;Name=LDO50_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02835;old_locus_tag=BVI1335_1150005 NZ_CAJZAO010000019.1 Protein Homology CDS 3780 4628 . + 0 ID=cds-WP_014725846.1;Parent=gene-LDO50_RS02835;Dbxref=GenBank:WP_014725846.1;Name=WP_014725846.1;Ontology_term=GO:0009055;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725846.1;locus_tag=LDO50_RS02835;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_014725846.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 4625 5731 . + . ID=gene-LDO50_RS02840;Name=LDO50_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02840;old_locus_tag=BVI1335_1150007 NZ_CAJZAO010000019.1 Protein Homology CDS 4625 5731 . + 0 ID=cds-WP_224019401.1;Parent=gene-LDO50_RS02840;Dbxref=GenBank:WP_224019401.1;Name=WP_224019401.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880114.1;locus_tag=LDO50_RS02840;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_224019401.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 5743 7053 . + . ID=gene-LDO50_RS02845;Name=LDO50_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02845;old_locus_tag=BVI1335_1150008 NZ_CAJZAO010000019.1 Protein Homology CDS 5743 7053 . + 0 ID=cds-WP_011880113.1;Parent=gene-LDO50_RS02845;Dbxref=GenBank:WP_011880113.1;Name=WP_011880113.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880113.1;locus_tag=LDO50_RS02845;product=FAD-dependent monooxygenase;protein_id=WP_011880113.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 7050 7349 . + . ID=gene-LDO50_RS02850;Name=LDO50_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02850;old_locus_tag=BVI1335_1150009 NZ_CAJZAO010000019.1 Protein Homology CDS 7050 7349 . + 0 ID=cds-WP_011880112.1;Parent=gene-LDO50_RS02850;Dbxref=GenBank:WP_011880112.1;Name=WP_011880112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018423212.1;locus_tag=LDO50_RS02850;product=ferredoxin family protein;protein_id=WP_011880112.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 7365 7691 . + . ID=gene-LDO50_RS02855;Name=LDO50_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02855;old_locus_tag=BVI1335_1150011 NZ_CAJZAO010000019.1 Protein Homology CDS 7365 7691 . + 0 ID=cds-WP_014725844.1;Parent=gene-LDO50_RS02855;Dbxref=GenBank:WP_014725844.1;Name=WP_014725844.1;Ontology_term=GO:0009055,GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880111.1;locus_tag=LDO50_RS02855;product=(2Fe-2S) ferredoxin domain-containing protein;protein_id=WP_014725844.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 7688 8173 . + . ID=gene-LDO50_RS02860;Name=LDO50_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02860;old_locus_tag=BVI1335_1150010 NZ_CAJZAO010000019.1 Protein Homology CDS 7688 8173 . + 0 ID=cds-WP_046424830.1;Parent=gene-LDO50_RS02860;Dbxref=GenBank:WP_046424830.1;Name=WP_046424830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018423241.1;locus_tag=LDO50_RS02860;product=hypothetical protein;protein_id=WP_046424830.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 8311 8757 . + . ID=gene-LDO50_RS02865;Name=LDO50_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02865;old_locus_tag=BVI1335_1150012 NZ_CAJZAO010000019.1 Protein Homology CDS 8311 8757 . + 0 ID=cds-WP_224019402.1;Parent=gene-LDO50_RS02865;Dbxref=GenBank:WP_224019402.1;Name=WP_224019402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880109.1;locus_tag=LDO50_RS02865;product=Fis family transcriptional regulator;protein_id=WP_224019402.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 8793 10193 . - . ID=gene-LDO50_RS02870;Name=LDO50_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02870;old_locus_tag=BVI1335_1150013 NZ_CAJZAO010000019.1 Protein Homology CDS 8793 10193 . - 0 ID=cds-WP_224019403.1;Parent=gene-LDO50_RS02870;Dbxref=GenBank:WP_224019403.1;Name=WP_224019403.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725842.1;locus_tag=LDO50_RS02870;product=sensor histidine kinase;protein_id=WP_224019403.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 10171 10902 . - . ID=gene-LDO50_RS02875;Name=LDO50_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02875;old_locus_tag=BVI1335_1150014 NZ_CAJZAO010000019.1 Protein Homology CDS 10171 10902 . - 0 ID=cds-WP_059493793.1;Parent=gene-LDO50_RS02875;Dbxref=GenBank:WP_059493793.1;Name=WP_059493793.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880107.1;locus_tag=LDO50_RS02875;product=response regulator transcription factor;protein_id=WP_059493793.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 10877 11500 . - . ID=gene-LDO50_RS02880;Name=LDO50_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02880;old_locus_tag=BVI1335_1150015 NZ_CAJZAO010000019.1 Protein Homology CDS 10877 11500 . - 0 ID=cds-WP_059493791.1;Parent=gene-LDO50_RS02880;Dbxref=GenBank:WP_059493791.1;Name=WP_059493791.1;Ontology_term=GO:0009055,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880106.1;locus_tag=LDO50_RS02880;product=cytochrome b/b6 domain-containing protein;protein_id=WP_059493791.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 11503 11787 . - . ID=gene-LDO50_RS02885;Name=LDO50_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02885;old_locus_tag=BVI1335_1150016 NZ_CAJZAO010000019.1 Protein Homology CDS 11503 11787 . - 0 ID=cds-WP_059454633.1;Parent=gene-LDO50_RS02885;Dbxref=GenBank:WP_059454633.1;Name=WP_059454633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880105.1;locus_tag=LDO50_RS02885;product=PepSY domain-containing protein;protein_id=WP_059454633.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 12007 12486 . + . ID=gene-LDO50_RS02890;Name=LDO50_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02890;old_locus_tag=BVI1335_1150017 NZ_CAJZAO010000019.1 Protein Homology CDS 12007 12486 . + 0 ID=cds-WP_014725839.1;Parent=gene-LDO50_RS02890;Dbxref=GenBank:WP_014725839.1;Name=WP_014725839.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880104.1;locus_tag=LDO50_RS02890;product=rubrerythrin family protein;protein_id=WP_014725839.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 12596 13888 . - . ID=gene-LDO50_RS02895;Name=LDO50_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02895;old_locus_tag=BVI1335_1150018 NZ_CAJZAO010000019.1 Protein Homology CDS 12596 13888 . - 0 ID=cds-WP_224019404.1;Parent=gene-LDO50_RS02895;Dbxref=GenBank:WP_224019404.1;Name=WP_224019404.1;Ontology_term=GO:0000166,GO:0016491,GO:0071949;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880103.1;locus_tag=LDO50_RS02895;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_224019404.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 13998 14717 . + . ID=gene-LDO50_RS02900;Name=LDO50_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02900;old_locus_tag=BVI1335_1150019 NZ_CAJZAO010000019.1 Protein Homology CDS 13998 14717 . + 0 ID=cds-WP_046424847.1;Parent=gene-LDO50_RS02900;Dbxref=GenBank:WP_046424847.1;Name=WP_046424847.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403731.1;locus_tag=LDO50_RS02900;product=class I SAM-dependent methyltransferase;protein_id=WP_046424847.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 14764 15198 . - . ID=gene-LDO50_RS02905;Name=LDO50_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02905;old_locus_tag=BVI1335_1150020 NZ_CAJZAO010000019.1 Protein Homology CDS 14764 15198 . - 0 ID=cds-WP_059454629.1;Parent=gene-LDO50_RS02905;Dbxref=GenBank:WP_059454629.1;Name=WP_059454629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658634.1;locus_tag=LDO50_RS02905;product=hypothetical protein;protein_id=WP_059454629.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 15209 15634 . - . ID=gene-LDO50_RS02910;Name=LDO50_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02910;old_locus_tag=BVI1335_1150021 NZ_CAJZAO010000019.1 Protein Homology CDS 15209 15634 . - 0 ID=cds-WP_059548263.1;Parent=gene-LDO50_RS02910;Dbxref=GenBank:WP_059548263.1;Name=WP_059548263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403733.1;locus_tag=LDO50_RS02910;product=hypothetical protein;protein_id=WP_059548263.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 15667 16890 . - . ID=gene-LDO50_RS02915;Name=LDO50_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02915;old_locus_tag=BVI1335_1150022 NZ_CAJZAO010000019.1 Protein Homology CDS 15667 16890 . - 0 ID=cds-WP_059454627.1;Parent=gene-LDO50_RS02915;Dbxref=GenBank:WP_059454627.1;Name=WP_059454627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880099.1;locus_tag=LDO50_RS02915;product=beta-ketoacyl synthase N-terminal-like domain-containing protein;protein_id=WP_059454627.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 16887 18116 . - . ID=gene-LDO50_RS02920;Name=LDO50_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02920;old_locus_tag=BVI1335_1150023 NZ_CAJZAO010000019.1 Protein Homology CDS 16887 18116 . - 0 ID=cds-WP_224019405.1;Parent=gene-LDO50_RS02920;Dbxref=GenBank:WP_224019405.1;Name=WP_224019405.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880098.1;locus_tag=LDO50_RS02920;product=beta-ketoacyl-ACP synthase;protein_id=WP_224019405.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 18116 18841 . - . ID=gene-LDO50_RS02925;Name=LDO50_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02925;old_locus_tag=BVI1335_1150024 NZ_CAJZAO010000019.1 Protein Homology CDS 18116 18841 . - 0 ID=cds-WP_046424858.1;Parent=gene-LDO50_RS02925;Dbxref=GenBank:WP_046424858.1;Name=WP_046424858.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658630.1;locus_tag=LDO50_RS02925;product=3-ketoacyl-ACP reductase FabG2;protein_id=WP_046424858.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 18838 19341 . - . ID=gene-LDO50_RS02930;Name=LDO50_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02930;old_locus_tag=BVI1335_1150025 NZ_CAJZAO010000019.1 Protein Homology CDS 18838 19341 . - 0 ID=cds-WP_046424860.1;Parent=gene-LDO50_RS02930;Dbxref=GenBank:WP_046424860.1;Name=WP_046424860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880096.1;locus_tag=LDO50_RS02930;product=hotdog family protein;protein_id=WP_046424860.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 19343 20051 . - . ID=gene-LDO50_RS02935;Name=LDO50_RS02935;end_range=20051,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02935;old_locus_tag=BVI1335_1150026;partial=true NZ_CAJZAO010000019.1 Protein Homology CDS 19343 20051 . - 1 ID=cds-WP_443797705.1;Parent=gene-LDO50_RS02935;Dbxref=GenBank:WP_443797705.1;Name=WP_443797705.1;end_range=20051,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415747.1;locus_tag=LDO50_RS02935;partial=true;product=beta-ketoacyl synthase N-terminal-like domain-containing protein;protein_id=WP_443797705.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq pseudogene 20062 20303 . - . ID=gene-LDO50_RS31245;Name=LDO50_RS31245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31245;partial=true;pseudo=true;start_range=.,20062 NZ_CAJZAO010000019.1 Protein Homology CDS 20062 20303 . - 0 ID=cds-LDO50_RS31245;Parent=gene-LDO50_RS31245;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415747.1;locus_tag=LDO50_RS31245;partial=true;product=beta-ketoacyl-[acyl-carrier-protein] synthase II;pseudo=true;start_range=.,20062;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 20300 22245 . - . ID=gene-LDO50_RS02940;Name=LDO50_RS02940;end_range=22245,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02940;old_locus_tag=BVI1335_1150028;partial=true NZ_CAJZAO010000019.1 Protein Homology CDS 20300 22245 . - 2 ID=cds-WP_443797706.1;Parent=gene-LDO50_RS02940;Dbxref=GenBank:WP_443797706.1;Name=WP_443797706.1;Ontology_term=GO:0016020;end_range=22245,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402442.1;locus_tag=LDO50_RS02940;partial=true;product=MMPL family transporter;protein_id=WP_443797706.1;transl_table=11 NZ_CAJZAO010000019.1 RefSeq gene 22256 22447 . - . ID=gene-LDO50_RS31250;Name=LDO50_RS31250;end_range=22447,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31250;old_locus_tag=BVI1335_1150029;partial=true;start_range=.,22256 NZ_CAJZAO010000019.1 Protein Homology CDS 22256 22447 . - 1 ID=cds-WP_443797707.1;Parent=gene-LDO50_RS31250;Dbxref=GenBank:WP_443797707.1;Name=WP_443797707.1;end_range=22447,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069025.1;locus_tag=LDO50_RS31250;partial=true;product=hypothetical protein;protein_id=WP_443797707.1;start_range=.,22256;transl_table=11 ##sequence-region NZ_CAJZAO010000020.1 1 22940 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000020.1 RefSeq region 1 22940 . + . ID=NZ_CAJZAO010000020.1:1..22940;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_116 NZ_CAJZAO010000020.1 RefSeq gene 268 585 . + . ID=gene-LDO50_RS02945;Name=LDO50_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02945;old_locus_tag=BVI1335_1160001 NZ_CAJZAO010000020.1 Protein Homology CDS 268 585 . + 0 ID=cds-WP_059459469.1;Parent=gene-LDO50_RS02945;Dbxref=GenBank:WP_059459469.1;Name=WP_059459469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546583.1;locus_tag=LDO50_RS02945;product=DUF7716 domain-containing protein;protein_id=WP_059459469.1;transl_table=11 NZ_CAJZAO010000020.1 RefSeq gene 673 1455 . - . ID=gene-LDO50_RS02950;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=LDO50_RS02950;old_locus_tag=BVI1335_1160002 NZ_CAJZAO010000020.1 Protein Homology CDS 673 1455 . - 0 ID=cds-WP_011883100.1;Parent=gene-LDO50_RS02950;Dbxref=GenBank:WP_011883100.1;Name=WP_011883100.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106837.1;locus_tag=LDO50_RS02950;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_011883100.1;transl_table=11 NZ_CAJZAO010000020.1 RefSeq gene 1452 2798 . - . ID=gene-LDO50_RS02955;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=LDO50_RS02955;old_locus_tag=BVI1335_1160003 NZ_CAJZAO010000020.1 Protein Homology CDS 1452 2798 . - 0 ID=cds-WP_011883101.1;Parent=gene-LDO50_RS02955;Dbxref=GenBank:WP_011883101.1;Name=WP_011883101.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409507.1;locus_tag=LDO50_RS02955;product=type VI secretion system baseplate subunit TssK;protein_id=WP_011883101.1;transl_table=11 NZ_CAJZAO010000020.1 RefSeq gene 2901 3500 . - . ID=gene-LDO50_RS02960;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=LDO50_RS02960;old_locus_tag=BVI1335_1160004 NZ_CAJZAO010000020.1 Protein Homology CDS 2901 3500 . - 0 ID=cds-WP_172820452.1;Parent=gene-LDO50_RS02960;Dbxref=GenBank:WP_172820452.1;Name=WP_172820452.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910489.1;locus_tag=LDO50_RS02960;product=type VI secretion system lipoprotein TssJ;protein_id=WP_172820452.1;transl_table=11 NZ_CAJZAO010000020.1 RefSeq gene 3888 4523 . + . ID=gene-LDO50_RS02965;Name=LDO50_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02965;old_locus_tag=BVI1335_1160005 NZ_CAJZAO010000020.1 Protein Homology CDS 3888 4523 . + 0 ID=cds-WP_011883103.1;Parent=gene-LDO50_RS02965;Dbxref=GenBank:WP_011883103.1;Name=WP_011883103.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883103.1;locus_tag=LDO50_RS02965;product=tetratricopeptide repeat protein;protein_id=WP_011883103.1;transl_table=11 NZ_CAJZAO010000020.1 RefSeq gene 4578 5093 . + . ID=gene-LDO50_RS02970;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=LDO50_RS02970;old_locus_tag=BVI1335_1160006 NZ_CAJZAO010000020.1 Protein Homology CDS 4578 5093 . + 0 ID=cds-WP_011883104.1;Parent=gene-LDO50_RS02970;Dbxref=GenBank:WP_011883104.1;Name=WP_011883104.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106779.1;locus_tag=LDO50_RS02970;product=type VI secretion system contractile sheath small subunit;protein_id=WP_011883104.1;transl_table=11 NZ_CAJZAO010000020.1 RefSeq gene 5109 6599 . + . ID=gene-LDO50_RS02975;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=LDO50_RS02975;old_locus_tag=BVI1335_1160007 NZ_CAJZAO010000020.1 Protein Homology CDS 5109 6599 . + 0 ID=cds-WP_011883105.1;Parent=gene-LDO50_RS02975;Dbxref=GenBank:WP_011883105.1;Name=WP_011883105.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012426790.1;locus_tag=LDO50_RS02975;product=type VI secretion system contractile sheath large subunit;protein_id=WP_011883105.1;transl_table=11 NZ_CAJZAO010000020.1 RefSeq gene 6670 7173 . + . ID=gene-LDO50_RS02980;Name=LDO50_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS02980;old_locus_tag=BVI1335_1160008 NZ_CAJZAO010000020.1 Protein Homology CDS 6670 7173 . + 0 ID=cds-WP_011883106.1;Parent=gene-LDO50_RS02980;Dbxref=GenBank:WP_011883106.1;Name=WP_011883106.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883106.1;locus_tag=LDO50_RS02980;product=Hcp family type VI secretion system effector;protein_id=WP_011883106.1;transl_table=11 NZ_CAJZAO010000020.1 RefSeq gene 7236 7721 . + . ID=gene-LDO50_RS02985;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=LDO50_RS02985;old_locus_tag=BVI1335_1160009 NZ_CAJZAO010000020.1 Protein Homology CDS 7236 7721 . + 0 ID=cds-WP_011883107.1;Parent=gene-LDO50_RS02985;Dbxref=GenBank:WP_011883107.1;Name=WP_011883107.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883107.1;locus_tag=LDO50_RS02985;product=type VI secretion system baseplate subunit TssE;protein_id=WP_011883107.1;transl_table=11 NZ_CAJZAO010000020.1 RefSeq gene 7799 9634 . + . ID=gene-LDO50_RS02990;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LDO50_RS02990;old_locus_tag=BVI1335_1160010 NZ_CAJZAO010000020.1 Protein Homology CDS 7799 9634 . + 0 ID=cds-WP_224019406.1;Parent=gene-LDO50_RS02990;Dbxref=GenBank:WP_224019406.1;Name=WP_224019406.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484396.1;locus_tag=LDO50_RS02990;product=type VI secretion system baseplate subunit TssF;protein_id=WP_224019406.1;transl_table=11 NZ_CAJZAO010000020.1 RefSeq gene 9598 10698 . + . ID=gene-LDO50_RS02995;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=LDO50_RS02995;old_locus_tag=BVI1335_1160011 NZ_CAJZAO010000020.1 Protein Homology CDS 9598 10698 . + 0 ID=cds-WP_011883109.1;Parent=gene-LDO50_RS02995;Dbxref=GenBank:WP_011883109.1;Name=WP_011883109.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010096521.1;locus_tag=LDO50_RS02995;product=type VI secretion system baseplate subunit TssG;protein_id=WP_011883109.1;transl_table=11 NZ_CAJZAO010000020.1 RefSeq gene 10737 13409 . + . ID=gene-LDO50_RS03000;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=LDO50_RS03000;old_locus_tag=BVI1335_1160012 NZ_CAJZAO010000020.1 Protein Homology CDS 10737 13409 . + 0 ID=cds-WP_014722343.1;Parent=gene-LDO50_RS03000;Dbxref=GenBank:WP_014722343.1;Name=WP_014722343.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009967199.1;locus_tag=LDO50_RS03000;product=type VI secretion system ATPase TssH;protein_id=WP_014722343.1;transl_table=11 NZ_CAJZAO010000020.1 RefSeq gene 13449 14570 . + . ID=gene-LDO50_RS03005;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=LDO50_RS03005;old_locus_tag=BVI1335_1160013 NZ_CAJZAO010000020.1 Protein Homology CDS 13449 14570 . + 0 ID=cds-WP_014722344.1;Parent=gene-LDO50_RS03005;Dbxref=GenBank:WP_014722344.1;Name=WP_014722344.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350763.1;locus_tag=LDO50_RS03005;product=type VI secretion system protein TssA;protein_id=WP_014722344.1;transl_table=11 NZ_CAJZAO010000020.1 RefSeq gene 14770 15345 . - . ID=gene-LDO50_RS03010;Name=LDO50_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03010;old_locus_tag=BVI1335_1160014 NZ_CAJZAO010000020.1 Protein Homology CDS 14770 15345 . - 0 ID=cds-WP_059567665.1;Parent=gene-LDO50_RS03010;Dbxref=GenBank:WP_059567665.1;Name=WP_059567665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722345.1;locus_tag=LDO50_RS03010;product=hypothetical protein;protein_id=WP_059567665.1;transl_table=11 NZ_CAJZAO010000020.1 RefSeq gene 15487 16446 . - . ID=gene-LDO50_RS03015;Name=LDO50_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03015;old_locus_tag=BVI1335_1160015 NZ_CAJZAO010000020.1 Protein Homology CDS 15487 16446 . - 0 ID=cds-WP_014722347.1;Parent=gene-LDO50_RS03015;Dbxref=GenBank:WP_014722347.1;Name=WP_014722347.1;Ontology_term=GO:0015288,GO:0042834,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757145.1;locus_tag=LDO50_RS03015;product=OmpA family protein;protein_id=WP_014722347.1;transl_table=11 NZ_CAJZAO010000020.1 RefSeq gene 16451 17440 . - . ID=gene-LDO50_RS03020;Name=tagF;gbkey=Gene;gene=tagF;gene_biotype=protein_coding;locus_tag=LDO50_RS03020;old_locus_tag=BVI1335_1160016 NZ_CAJZAO010000020.1 Protein Homology CDS 16451 17440 . - 0 ID=cds-WP_011883114.1;Parent=gene-LDO50_RS03020;Dbxref=GenBank:WP_011883114.1;Name=WP_011883114.1;gbkey=CDS;gene=tagF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483243.1;locus_tag=LDO50_RS03020;product=type VI secretion system-associated protein TagF;protein_id=WP_011883114.1;transl_table=11 NZ_CAJZAO010000020.1 RefSeq gene 17437 21378 . - . ID=gene-LDO50_RS03025;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=LDO50_RS03025;old_locus_tag=BVI1335_1160017 NZ_CAJZAO010000020.1 Protein Homology CDS 17437 21378 . - 0 ID=cds-WP_011883115.1;Parent=gene-LDO50_RS03025;Dbxref=GenBank:WP_011883115.1;Name=WP_011883115.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssM;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655832.1;locus_tag=LDO50_RS03025;product=type VI secretion system membrane subunit TssM;protein_id=WP_011883115.1;transl_table=11 NZ_CAJZAO010000020.1 RefSeq gene 21680 22525 . - . ID=gene-LDO50_RS03030;Name=LDO50_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03030;old_locus_tag=BVI1335_1160018 NZ_CAJZAO010000020.1 Protein Homology CDS 21680 22525 . - 0 ID=cds-WP_014722348.1;Parent=gene-LDO50_RS03030;Dbxref=GenBank:WP_014722348.1;Name=WP_014722348.1;Ontology_term=GO:0071554,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=cell wall organization or biogenesis|0071554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898247.1;locus_tag=LDO50_RS03030;product=M15 family metallopeptidase;protein_id=WP_014722348.1;transl_table=11 NZ_CAJZAO010000020.1 RefSeq pseudogene 22647 22940 . + . ID=gene-LDO50_RS03035;Name=LDO50_RS03035;end_range=22940,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS03035;partial=true;pseudo=true NZ_CAJZAO010000020.1 Protein Homology CDS 22647 22940 . + 0 ID=cds-LDO50_RS03035;Parent=gene-LDO50_RS03035;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=22940,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494415.1;locus_tag=LDO50_RS03035;partial=true;product=phage tail protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000021.1 1 17225 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000021.1 RefSeq region 1 17225 . + . ID=NZ_CAJZAO010000021.1:1..17225;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_117 NZ_CAJZAO010000021.1 RefSeq gene 1 235 . + . ID=gene-LDO50_RS03040;Name=LDO50_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03040;old_locus_tag=BVI1335_1170001;partial=true;start_range=.,1 NZ_CAJZAO010000021.1 Protein Homology CDS 1 235 . + 1 ID=cds-WP_290370671.1;Parent=gene-LDO50_RS03040;Dbxref=GenBank:WP_290370671.1;Name=WP_290370671.1;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880483.1;locus_tag=LDO50_RS03040;partial=true;product=NAD(P)-dependent oxidoreductase;protein_id=WP_290370671.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000021.1 RefSeq gene 394 1794 . + . ID=gene-LDO50_RS03045;Name=LDO50_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03045;old_locus_tag=BVI1335_1170002 NZ_CAJZAO010000021.1 Protein Homology CDS 394 1794 . + 0 ID=cds-WP_059548671.1;Parent=gene-LDO50_RS03045;Dbxref=GenBank:WP_059548671.1;Name=WP_059548671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749695.1;locus_tag=LDO50_RS03045;product=aspartate aminotransferase family protein;protein_id=WP_059548671.1;transl_table=11 NZ_CAJZAO010000021.1 RefSeq gene 1881 2372 . + . ID=gene-LDO50_RS03050;Name=LDO50_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03050;old_locus_tag=BVI1335_1170003 NZ_CAJZAO010000021.1 Protein Homology CDS 1881 2372 . + 0 ID=cds-WP_011880485.1;Parent=gene-LDO50_RS03050;Dbxref=GenBank:WP_011880485.1;Name=WP_011880485.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880485.1;locus_tag=LDO50_RS03050;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011880485.1;transl_table=11 NZ_CAJZAO010000021.1 RefSeq gene 2479 3951 . + . ID=gene-LDO50_RS03055;Name=LDO50_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03055;old_locus_tag=BVI1335_1170004 NZ_CAJZAO010000021.1 Protein Homology CDS 2479 3951 . + 0 ID=cds-WP_034193630.1;Parent=gene-LDO50_RS03055;Dbxref=GenBank:WP_034193630.1;Name=WP_034193630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100339.1;locus_tag=LDO50_RS03055;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_034193630.1;transl_table=11 NZ_CAJZAO010000021.1 RefSeq gene 4188 5708 . + . ID=gene-LDO50_RS03060;Name=LDO50_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03060;old_locus_tag=BVI1335_1170005 NZ_CAJZAO010000021.1 Protein Homology CDS 4188 5708 . + 0 ID=cds-WP_059463233.1;Parent=gene-LDO50_RS03060;Dbxref=GenBank:WP_059463233.1;Name=WP_059463233.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749692.1;locus_tag=LDO50_RS03060;product=GGDEF domain-containing protein;protein_id=WP_059463233.1;transl_table=11 NZ_CAJZAO010000021.1 RefSeq gene 5834 7420 . + . ID=gene-LDO50_RS03065;Name=LDO50_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03065;old_locus_tag=BVI1335_1170006 NZ_CAJZAO010000021.1 Protein Homology CDS 5834 7420 . + 0 ID=cds-WP_224019408.1;Parent=gene-LDO50_RS03065;Dbxref=GenBank:WP_224019408.1;Name=WP_224019408.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549858.1;locus_tag=LDO50_RS03065;product=methyl-accepting chemotaxis protein;protein_id=WP_224019408.1;transl_table=11 NZ_CAJZAO010000021.1 RefSeq gene 7601 9559 . + . ID=gene-LDO50_RS03070;Name=LDO50_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03070;old_locus_tag=BVI1335_1170007 NZ_CAJZAO010000021.1 Protein Homology CDS 7601 9559 . + 0 ID=cds-WP_059457707.1;Parent=gene-LDO50_RS03070;Dbxref=GenBank:WP_059457707.1;Name=WP_059457707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372385.1;locus_tag=LDO50_RS03070;product=phosphatase PAP2 family protein;protein_id=WP_059457707.1;transl_table=11 NZ_CAJZAO010000021.1 RefSeq gene 9646 10428 . - . ID=gene-LDO50_RS03075;Name=LDO50_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03075;old_locus_tag=BVI1335_1170008 NZ_CAJZAO010000021.1 Protein Homology CDS 9646 10428 . - 0 ID=cds-WP_059548665.1;Parent=gene-LDO50_RS03075;Dbxref=GenBank:WP_059548665.1;Name=WP_059548665.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372384.1;locus_tag=LDO50_RS03075;product=substrate-binding domain-containing protein;protein_id=WP_059548665.1;transl_table=11 NZ_CAJZAO010000021.1 RefSeq gene 10578 11384 . + . ID=gene-LDO50_RS03080;Name=LDO50_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03080;old_locus_tag=BVI1335_1170009 NZ_CAJZAO010000021.1 Protein Homology CDS 10578 11384 . + 0 ID=cds-WP_059548749.1;Parent=gene-LDO50_RS03080;Dbxref=GenBank:WP_059548749.1;Name=WP_059548749.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372383.1;locus_tag=LDO50_RS03080;product=IclR family transcriptional regulator;protein_id=WP_059548749.1;transl_table=11 NZ_CAJZAO010000021.1 RefSeq gene 11412 12743 . - . ID=gene-LDO50_RS03085;Name=LDO50_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03085;old_locus_tag=BVI1335_1170010 NZ_CAJZAO010000021.1 Protein Homology CDS 11412 12743 . - 0 ID=cds-WP_059696820.1;Parent=gene-LDO50_RS03085;Dbxref=GenBank:WP_059696820.1;Name=WP_059696820.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372382.1;locus_tag=LDO50_RS03085;product=MFS transporter;protein_id=WP_059696820.1;transl_table=11 NZ_CAJZAO010000021.1 RefSeq gene 13016 13792 . + . ID=gene-LDO50_RS03090;Name=LDO50_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03090;old_locus_tag=BVI1335_1170011 NZ_CAJZAO010000021.1 Protein Homology CDS 13016 13792 . + 0 ID=cds-WP_059548660.1;Parent=gene-LDO50_RS03090;Dbxref=GenBank:WP_059548660.1;Name=WP_059548660.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749687.1;locus_tag=LDO50_RS03090;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_059548660.1;transl_table=11 NZ_CAJZAO010000021.1 RefSeq gene 13812 15911 . + . ID=gene-LDO50_RS03095;Name=LDO50_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03095;old_locus_tag=BVI1335_1170012 NZ_CAJZAO010000021.1 Protein Homology CDS 13812 15911 . + 0 ID=cds-WP_059548658.1;Parent=gene-LDO50_RS03095;Dbxref=GenBank:WP_059548658.1;Name=WP_059548658.1;Ontology_term=GO:0005524,GO:0043758,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,acetate-CoA ligase (ADP-forming) activity|0043758||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372380.1;locus_tag=LDO50_RS03095;product=acetate--CoA ligase family protein;protein_id=WP_059548658.1;transl_table=11 NZ_CAJZAO010000021.1 RefSeq gene 15981 16940 . + . ID=gene-LDO50_RS03100;Name=LDO50_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03100;old_locus_tag=BVI1335_1170013 NZ_CAJZAO010000021.1 Protein Homology CDS 15981 16940 . + 0 ID=cds-WP_059548656.1;Parent=gene-LDO50_RS03100;Dbxref=GenBank:WP_059548656.1;Name=WP_059548656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726147.1;locus_tag=LDO50_RS03100;product=DUF72 domain-containing protein;protein_id=WP_059548656.1;transl_table=11 NZ_CAJZAO010000021.1 RefSeq pseudogene 17058 17225 . - . ID=gene-LDO50_RS03105;Name=LDO50_RS03105;end_range=17225,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS03105;old_locus_tag=BVI1335_1170015;partial=true;pseudo=true;start_range=.,17058 NZ_CAJZAO010000021.1 Protein Homology CDS 17058 17225 . - 2 ID=cds-LDO50_RS03105;Parent=gene-LDO50_RS03105;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=17225,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880492.1;locus_tag=LDO50_RS03105;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,17058;transl_table=11 ##sequence-region NZ_CAJZAO010000022.1 1 14656 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000022.1 RefSeq region 1 14656 . + . ID=NZ_CAJZAO010000022.1:1..14656;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_118 NZ_CAJZAO010000022.1 RefSeq gene 1 1308 . + . ID=gene-LDO50_RS03110;Name=LDO50_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03110;old_locus_tag=BVI1335_1180002;partial=true;start_range=.,1 NZ_CAJZAO010000022.1 Protein Homology CDS 1 1308 . + 0 ID=cds-WP_224019410.1;Parent=gene-LDO50_RS03110;Dbxref=GenBank:WP_224019410.1;Name=WP_224019410.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879967.1;locus_tag=LDO50_RS03110;partial=true;product=c-type cytochrome;protein_id=WP_224019410.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000022.1 RefSeq gene 1637 2035 . - . ID=gene-LDO50_RS03115;Name=LDO50_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03115;old_locus_tag=BVI1335_1180004 NZ_CAJZAO010000022.1 Protein Homology CDS 1637 2035 . - 0 ID=cds-WP_224019412.1;Parent=gene-LDO50_RS03115;Dbxref=GenBank:WP_224019412.1;Name=WP_224019412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407856.1;locus_tag=LDO50_RS03115;product=RidA family protein;protein_id=WP_224019412.1;transl_table=11 NZ_CAJZAO010000022.1 RefSeq gene 2139 2915 . - . ID=gene-LDO50_RS03120;Name=benD;gbkey=Gene;gene=benD;gene_biotype=protein_coding;locus_tag=LDO50_RS03120;old_locus_tag=BVI1335_1180005 NZ_CAJZAO010000022.1 Protein Homology CDS 2139 2915 . - 0 ID=cds-WP_011879965.1;Parent=gene-LDO50_RS03120;Dbxref=GenBank:WP_011879965.1;Name=WP_011879965.1;gbkey=CDS;gene=benD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336679.1;locus_tag=LDO50_RS03120;product=benzoate diol dehydrogenase BenD;protein_id=WP_011879965.1;transl_table=11 NZ_CAJZAO010000022.1 RefSeq gene 2912 3934 . - . ID=gene-LDO50_RS03125;Name=benC;gbkey=Gene;gene=benC;gene_biotype=protein_coding;locus_tag=LDO50_RS03125;old_locus_tag=BVI1335_1180006 NZ_CAJZAO010000022.1 Protein Homology CDS 2912 3934 . - 0 ID=cds-WP_224019413.1;Parent=gene-LDO50_RS03125;Dbxref=GenBank:WP_224019413.1;Name=WP_224019413.1;gbkey=CDS;gene=benC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485361.1;locus_tag=LDO50_RS03125;product=benzoate 1%2C2-dioxygenase electron transfer component BenC;protein_id=WP_224019413.1;transl_table=11 NZ_CAJZAO010000022.1 RefSeq gene 3973 4461 . - . ID=gene-LDO50_RS03130;Name=benB;gbkey=Gene;gene=benB;gene_biotype=protein_coding;locus_tag=LDO50_RS03130;old_locus_tag=BVI1335_1180007 NZ_CAJZAO010000022.1 Protein Homology CDS 3973 4461 . - 0 ID=cds-WP_011879963.1;Parent=gene-LDO50_RS03130;Dbxref=GenBank:WP_011879963.1;Name=WP_011879963.1;Ontology_term=GO:0008152;gbkey=CDS;gene=benB;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011695017.1;locus_tag=LDO50_RS03130;product=benzoate 1%2C2-dioxygenase small subunit;protein_id=WP_011879963.1;transl_table=11 NZ_CAJZAO010000022.1 RefSeq gene 4458 5816 . - . ID=gene-LDO50_RS03135;Name=LDO50_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03135;old_locus_tag=BVI1335_1180008 NZ_CAJZAO010000022.1 Protein Homology CDS 4458 5816 . - 0 ID=cds-WP_224019415.1;Parent=gene-LDO50_RS03135;Dbxref=GenBank:WP_224019415.1;Name=WP_224019415.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661450.1;locus_tag=LDO50_RS03135;product=Rieske 2Fe-2S domain-containing protein;protein_id=WP_224019415.1;transl_table=11 NZ_CAJZAO010000022.1 RefSeq gene 5928 6869 . - . ID=gene-LDO50_RS03140;Name=catA;gbkey=Gene;gene=catA;gene_biotype=protein_coding;locus_tag=LDO50_RS03140;old_locus_tag=BVI1335_1180009 NZ_CAJZAO010000022.1 Protein Homology CDS 5928 6869 . - 0 ID=cds-WP_224019417.1;Parent=gene-LDO50_RS03140;Dbxref=GenBank:WP_224019417.1;Name=WP_224019417.1;Ontology_term=GO:0019615,GO:0005506,GO:0018576;gbkey=CDS;gene=catA;go_function=iron ion binding|0005506||IEA,catechol 1%2C2-dioxygenase activity|0018576||IEA;go_process=catechol catabolic process%2C ortho-cleavage|0019615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485382.1;locus_tag=LDO50_RS03140;product=catechol 1%2C2-dioxygenase;protein_id=WP_224019417.1;transl_table=11 NZ_CAJZAO010000022.1 RefSeq gene 7822 9006 . - . ID=gene-LDO50_RS03145;Name=LDO50_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03145;old_locus_tag=BVI1335_1180010 NZ_CAJZAO010000022.1 Protein Homology CDS 7822 9006 . - 0 ID=cds-WP_059495780.1;Parent=gene-LDO50_RS03145;Dbxref=GenBank:WP_059495780.1;Name=WP_059495780.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758807.1;locus_tag=LDO50_RS03145;product=sugar transporter;protein_id=WP_059495780.1;transl_table=11 NZ_CAJZAO010000022.1 RefSeq gene 9234 9908 . + . ID=gene-LDO50_RS03150;Name=LDO50_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03150;old_locus_tag=BVI1335_1180011 NZ_CAJZAO010000022.1 Protein Homology CDS 9234 9908 . + 0 ID=cds-WP_011879959.1;Parent=gene-LDO50_RS03150;Dbxref=GenBank:WP_011879959.1;Name=WP_011879959.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008347718.1;locus_tag=LDO50_RS03150;product=HAD family hydrolase;protein_id=WP_011879959.1;transl_table=11 NZ_CAJZAO010000022.1 RefSeq gene 10191 10898 . - . ID=gene-LDO50_RS03155;Name=LDO50_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03155;old_locus_tag=BVI1335_1180012 NZ_CAJZAO010000022.1 Protein Homology CDS 10191 10898 . - 0 ID=cds-WP_034192825.1;Parent=gene-LDO50_RS03155;Dbxref=GenBank:WP_034192825.1;Name=WP_034192825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009961057.1;locus_tag=LDO50_RS03155;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=WP_034192825.1;transl_table=11 NZ_CAJZAO010000022.1 RefSeq gene 11028 11270 . - . ID=gene-LDO50_RS03160;Name=LDO50_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03160;old_locus_tag=BVI1335_1180013 NZ_CAJZAO010000022.1 Protein Homology CDS 11028 11270 . - 0 ID=cds-WP_011879957.1;Parent=gene-LDO50_RS03160;Dbxref=GenBank:WP_011879957.1;Name=WP_011879957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372628.1;locus_tag=LDO50_RS03160;product=DUF6566 family protein;protein_id=WP_011879957.1;transl_table=11 NZ_CAJZAO010000022.1 RefSeq gene 11448 12149 . + . ID=gene-LDO50_RS03165;Name=LDO50_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03165;old_locus_tag=BVI1335_1180015 NZ_CAJZAO010000022.1 Protein Homology CDS 11448 12149 . + 0 ID=cds-WP_011879956.1;Parent=gene-LDO50_RS03165;Dbxref=GenBank:WP_011879956.1;Name=WP_011879956.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405126.1;locus_tag=LDO50_RS03165;product=MgtC/SapB family protein;protein_id=WP_011879956.1;transl_table=11 NZ_CAJZAO010000022.1 RefSeq gene 12146 12484 . + . ID=gene-LDO50_RS03170;Name=LDO50_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03170;old_locus_tag=BVI1335_1180016 NZ_CAJZAO010000022.1 Protein Homology CDS 12146 12484 . + 0 ID=cds-WP_045579607.1;Parent=gene-LDO50_RS03170;Dbxref=GenBank:WP_045579607.1;Name=WP_045579607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405125.1;locus_tag=LDO50_RS03170;product=hypothetical protein;protein_id=WP_045579607.1;transl_table=11 NZ_CAJZAO010000022.1 RefSeq gene 12481 14656 . + . ID=gene-LDO50_RS03175;Name=LDO50_RS03175;end_range=14656,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03175;partial=true NZ_CAJZAO010000022.1 Protein Homology CDS 12481 14656 . + 0 ID=cds-WP_224019418.1;Parent=gene-LDO50_RS03175;Dbxref=GenBank:WP_224019418.1;Name=WP_224019418.1;end_range=14656,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336639.1;locus_tag=LDO50_RS03175;partial=true;product=VTT domain-containing protein;protein_id=WP_224019418.1;transl_table=11 ##sequence-region NZ_CAJZAO010000023.1 1 43509 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000023.1 RefSeq region 1 43509 . + . ID=NZ_CAJZAO010000023.1:1..43509;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_119 NZ_CAJZAO010000023.1 RefSeq gene 1 1814 . - . ID=gene-LDO50_RS03180;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LDO50_RS03180;partial=true;start_range=.,1 NZ_CAJZAO010000023.1 Protein Homology CDS 1 1814 . - 0 ID=cds-WP_224019419.1;Parent=gene-LDO50_RS03180;Dbxref=GenBank:WP_224019419.1;Name=WP_224019419.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759227.1;locus_tag=LDO50_RS03180;partial=true;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_224019419.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 1906 2394 . - . ID=gene-LDO50_RS03185;Name=LDO50_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03185;old_locus_tag=BVI1335_1190002 NZ_CAJZAO010000023.1 Protein Homology CDS 1906 2394 . - 0 ID=cds-WP_014725096.1;Parent=gene-LDO50_RS03185;Dbxref=GenBank:WP_014725096.1;Name=WP_014725096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899671.1;locus_tag=LDO50_RS03185;product=hypothetical protein;protein_id=WP_014725096.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 2372 3643 . - . ID=gene-LDO50_RS03190;Name=pgaC;gbkey=Gene;gene=pgaC;gene_biotype=protein_coding;locus_tag=LDO50_RS03190;old_locus_tag=BVI1335_1190003 NZ_CAJZAO010000023.1 Protein Homology CDS 2372 3643 . - 0 ID=cds-WP_011881951.1;Parent=gene-LDO50_RS03190;Dbxref=GenBank:WP_011881951.1;Name=WP_011881951.1;Ontology_term=GO:0042710,GO:0008375;gbkey=CDS;gene=pgaC;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=biofilm formation|0042710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217189.1;locus_tag=LDO50_RS03190;product=poly-beta-1%2C6-N-acetyl-D-glucosamine synthase;protein_id=WP_011881951.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 3640 5733 . - . ID=gene-LDO50_RS03195;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=LDO50_RS03195;old_locus_tag=BVI1335_1190004 NZ_CAJZAO010000023.1 Protein Homology CDS 3640 5733 . - 0 ID=cds-WP_045578116.1;Parent=gene-LDO50_RS03195;Dbxref=GenBank:WP_045578116.1;Name=WP_045578116.1;Ontology_term=GO:0000271,GO:0019213;gbkey=CDS;gene=pgaB;go_function=deacetylase activity|0019213||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753607.1;locus_tag=LDO50_RS03195;product=poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB;protein_id=WP_045578116.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 5749 8553 . - . ID=gene-LDO50_RS03200;Name=pgaA;gbkey=Gene;gene=pgaA;gene_biotype=protein_coding;locus_tag=LDO50_RS03200;old_locus_tag=BVI1335_1190005 NZ_CAJZAO010000023.1 Protein Homology CDS 5749 8553 . - 0 ID=cds-WP_224019420.1;Parent=gene-LDO50_RS03200;Dbxref=GenBank:WP_224019420.1;Name=WP_224019420.1;Ontology_term=GO:1901515,GO:0009279;gbkey=CDS;gene=pgaA;go_component=cell outer membrane|0009279||IEA;go_function=poly-beta-1%2C6-N-acetyl-D-glucosamine transmembrane transporter activity|1901515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725094.1;locus_tag=LDO50_RS03200;product=poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA;protein_id=WP_224019420.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 8656 9420 . - . ID=gene-LDO50_RS03205;Name=LDO50_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03205;old_locus_tag=BVI1335_1190006 NZ_CAJZAO010000023.1 Protein Homology CDS 8656 9420 . - 0 ID=cds-WP_059559445.1;Parent=gene-LDO50_RS03205;Dbxref=GenBank:WP_059559445.1;Name=WP_059559445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881954.1;locus_tag=LDO50_RS03205;product=hypothetical protein;protein_id=WP_059559445.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 9483 9914 . - . ID=gene-LDO50_RS03210;Name=LDO50_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03210;old_locus_tag=BVI1335_1190007 NZ_CAJZAO010000023.1 Protein Homology CDS 9483 9914 . - 0 ID=cds-WP_034193832.1;Parent=gene-LDO50_RS03210;Dbxref=GenBank:WP_034193832.1;Name=WP_034193832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725092.1;locus_tag=LDO50_RS03210;product=hypothetical protein;protein_id=WP_034193832.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 10248 10637 . + . ID=gene-LDO50_RS03215;Name=LDO50_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03215;old_locus_tag=BVI1335_1190008 NZ_CAJZAO010000023.1 GeneMarkS-2+ CDS 10248 10637 . + 0 ID=cds-WP_155772575.1;Parent=gene-LDO50_RS03215;Dbxref=GenBank:WP_155772575.1;Name=WP_155772575.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS03215;product=hypothetical protein;protein_id=WP_155772575.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 10580 11572 . - . ID=gene-LDO50_RS03220;Name=LDO50_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03220;old_locus_tag=BVI1335_1190009 NZ_CAJZAO010000023.1 Protein Homology CDS 10580 11572 . - 0 ID=cds-WP_034193833.1;Parent=gene-LDO50_RS03220;Dbxref=GenBank:WP_034193833.1;Name=WP_034193833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725091.1;locus_tag=LDO50_RS03220;product=LysR substrate-binding domain-containing protein;protein_id=WP_034193833.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 12147 13562 . + . ID=gene-LDO50_RS03225;Name=LDO50_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03225;old_locus_tag=BVI1335_1190010 NZ_CAJZAO010000023.1 Protein Homology CDS 12147 13562 . + 0 ID=cds-WP_011881958.1;Parent=gene-LDO50_RS03225;Dbxref=GenBank:WP_011881958.1;Name=WP_011881958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877418.1;locus_tag=LDO50_RS03225;product=circularly permuted type 2 ATP-grasp protein;protein_id=WP_011881958.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 13631 14572 . + . ID=gene-LDO50_RS03230;Name=LDO50_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03230;old_locus_tag=BVI1335_1190011 NZ_CAJZAO010000023.1 Protein Homology CDS 13631 14572 . + 0 ID=cds-WP_059694840.1;Parent=gene-LDO50_RS03230;Dbxref=GenBank:WP_059694840.1;Name=WP_059694840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010108140.1;locus_tag=LDO50_RS03230;product=alpha-E domain-containing protein;protein_id=WP_059694840.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 14581 15555 . + . ID=gene-LDO50_RS03235;Name=LDO50_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03235;old_locus_tag=BVI1335_1190012 NZ_CAJZAO010000023.1 Protein Homology CDS 14581 15555 . + 0 ID=cds-WP_011881960.1;Parent=gene-LDO50_RS03235;Dbxref=GenBank:WP_011881960.1;Name=WP_011881960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403405.1;locus_tag=LDO50_RS03235;product=transglutaminase family protein;protein_id=WP_011881960.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 15649 19086 . + . ID=gene-LDO50_RS03240;Name=LDO50_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03240;old_locus_tag=BVI1335_1190013 NZ_CAJZAO010000023.1 Protein Homology CDS 15649 19086 . + 0 ID=cds-WP_069263542.1;Parent=gene-LDO50_RS03240;Dbxref=GenBank:WP_069263542.1;Name=WP_069263542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495081.1;locus_tag=LDO50_RS03240;product=transglutaminase family protein;protein_id=WP_069263542.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 19297 21900 . + . ID=gene-LDO50_RS03245;Name=LDO50_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03245;old_locus_tag=BVI1335_1190014 NZ_CAJZAO010000023.1 Protein Homology CDS 19297 21900 . + 0 ID=cds-WP_059889139.1;Parent=gene-LDO50_RS03245;Dbxref=GenBank:WP_059889139.1;Name=WP_059889139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355530.1;locus_tag=LDO50_RS03245;product=circularly permuted type 2 ATP-grasp protein;protein_id=WP_059889139.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 21894 22985 . + . ID=gene-LDO50_RS03250;Name=LDO50_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03250;old_locus_tag=BVI1335_1190015 NZ_CAJZAO010000023.1 Protein Homology CDS 21894 22985 . + 0 ID=cds-WP_011881963.1;Parent=gene-LDO50_RS03250;Dbxref=GenBank:WP_011881963.1;Name=WP_011881963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658548.1;locus_tag=LDO50_RS03250;product=transglutaminase family protein;protein_id=WP_011881963.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 23171 23443 . + . ID=gene-LDO50_RS03255;Name=LDO50_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03255;old_locus_tag=BVI1335_1190016 NZ_CAJZAO010000023.1 Protein Homology CDS 23171 23443 . + 0 ID=cds-WP_011881964.1;Parent=gene-LDO50_RS03255;Dbxref=GenBank:WP_011881964.1;Name=WP_011881964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365826.1;locus_tag=LDO50_RS03255;product=hypothetical protein;protein_id=WP_011881964.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 23484 24416 . - . ID=gene-LDO50_RS03260;Name=pip;gbkey=Gene;gene=pip;gene_biotype=protein_coding;locus_tag=LDO50_RS03260;old_locus_tag=BVI1335_1190017 NZ_CAJZAO010000023.1 Protein Homology CDS 23484 24416 . - 0 ID=cds-WP_011881965.1;Parent=gene-LDO50_RS03260;Dbxref=GenBank:WP_011881965.1;Name=WP_011881965.1;Ontology_term=GO:0030163,GO:0004177,GO:0005737;gbkey=CDS;gene=pip;go_component=cytoplasm|0005737||IEA;go_function=aminopeptidase activity|0004177||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899657.1;locus_tag=LDO50_RS03260;product=prolyl aminopeptidase;protein_id=WP_011881965.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 24938 25513 . - . ID=gene-LDO50_RS03265;Name=LDO50_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03265;old_locus_tag=BVI1335_1190019 NZ_CAJZAO010000023.1 Protein Homology CDS 24938 25513 . - 0 ID=cds-WP_011881966.1;Parent=gene-LDO50_RS03265;Dbxref=GenBank:WP_011881966.1;Name=WP_011881966.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881966.1;locus_tag=LDO50_RS03265;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011881966.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 25650 26333 . + . ID=gene-LDO50_RS03270;Name=LDO50_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03270;old_locus_tag=BVI1335_1190020 NZ_CAJZAO010000023.1 Protein Homology CDS 25650 26333 . + 0 ID=cds-WP_212171666.1;Parent=gene-LDO50_RS03270;Dbxref=GenBank:WP_212171666.1;Name=WP_212171666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725086.1;locus_tag=LDO50_RS03270;product=glutathione S-transferase;protein_id=WP_212171666.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 26683 28446 . - . ID=gene-LDO50_RS03275;Name=arsA;gbkey=Gene;gene=arsA;gene_biotype=protein_coding;locus_tag=LDO50_RS03275;old_locus_tag=BVI1335_1190021 NZ_CAJZAO010000023.1 Protein Homology CDS 26683 28446 . - 0 ID=cds-WP_126220810.1;Parent=gene-LDO50_RS03275;Dbxref=GenBank:WP_126220810.1;Name=WP_126220810.1;Ontology_term=GO:0071722,GO:0005524,GO:0015446,GO:0016887;gbkey=CDS;gene=arsA;go_function=ATP binding|0005524||IEA,ATPase-coupled arsenite transmembrane transporter activity|0015446||IEA,ATP hydrolysis activity|0016887||IEA;go_process=detoxification of arsenic-containing substance|0071722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725085.1;locus_tag=LDO50_RS03275;product=arsenical pump-driving ATPase;protein_id=WP_126220810.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 28456 29301 . - . ID=gene-LDO50_RS31035;Name=arsD;gbkey=Gene;gene=arsD;gene_biotype=protein_coding;locus_tag=LDO50_RS31035;old_locus_tag=BVI1335_1190022 NZ_CAJZAO010000023.1 Protein Homology CDS 28456 29301 . - 0 ID=cds-WP_014725084.1;Parent=gene-LDO50_RS31035;Dbxref=GenBank:WP_014725084.1;Name=WP_014725084.1;Ontology_term=GO:0046685,GO:0003677;gbkey=CDS;gene=arsD;go_function=DNA binding|0003677||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881969.1;locus_tag=LDO50_RS31035;product=arsenite efflux transporter metallochaperone ArsD;protein_id=WP_014725084.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 29437 30516 . - . ID=gene-LDO50_RS03290;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=LDO50_RS03290;old_locus_tag=BVI1335_1190023 NZ_CAJZAO010000023.1 Protein Homology CDS 29437 30516 . - 0 ID=cds-WP_014725082.1;Parent=gene-LDO50_RS03290;Dbxref=GenBank:WP_014725082.1;Name=WP_014725082.1;Ontology_term=GO:0015700,GO:0046685,GO:0008490,GO:0015103,GO:0015297,GO:0016020;gbkey=CDS;gene=arsB;go_component=membrane|0016020||IEA;go_function=arsenite secondary active transmembrane transporter activity|0008490||IEA,inorganic anion transmembrane transporter activity|0015103||IEA,antiporter activity|0015297||IEA;go_process=arsenite transport|0015700||IEA,response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725082.1;locus_tag=LDO50_RS03290;product=ACR3 family arsenite efflux transporter;protein_id=WP_014725082.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 30540 31037 . - . ID=gene-LDO50_RS03295;Name=LDO50_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03295;old_locus_tag=BVI1335_1190024 NZ_CAJZAO010000023.1 Protein Homology CDS 30540 31037 . - 0 ID=cds-WP_011881971.1;Parent=gene-LDO50_RS03295;Dbxref=GenBank:WP_011881971.1;Name=WP_011881971.1;Ontology_term=GO:0046685,GO:0004725,GO:0030612;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA,arsenate reductase (thioredoxin) activity|0030612||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881971.1;locus_tag=LDO50_RS03295;product=arsenate reductase ArsC;protein_id=WP_011881971.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 31155 31478 . - . ID=gene-LDO50_RS03300;Name=LDO50_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03300;old_locus_tag=BVI1335_1190025 NZ_CAJZAO010000023.1 Protein Homology CDS 31155 31478 . - 0 ID=cds-WP_014725081.1;Parent=gene-LDO50_RS03300;Dbxref=GenBank:WP_014725081.1;Name=WP_014725081.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725081.1;locus_tag=LDO50_RS03300;product=ArsR/SmtB family transcription factor;protein_id=WP_014725081.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 31610 32674 . - . ID=gene-LDO50_RS03305;Name=LDO50_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03305;old_locus_tag=BVI1335_1190026 NZ_CAJZAO010000023.1 Protein Homology CDS 31610 32674 . - 0 ID=cds-WP_034193839.1;Parent=gene-LDO50_RS03305;Dbxref=GenBank:WP_034193839.1;Name=WP_034193839.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187270.1;locus_tag=LDO50_RS03305;product=2-aminoethylphosphonate aminotransferase;protein_id=WP_034193839.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 32674 33855 . - . ID=gene-LDO50_RS03310;Name=aepY;gbkey=Gene;gene=aepY;gene_biotype=protein_coding;locus_tag=LDO50_RS03310;old_locus_tag=BVI1335_1190027 NZ_CAJZAO010000023.1 Protein Homology CDS 32674 33855 . - 0 ID=cds-WP_224019421.1;Parent=gene-LDO50_RS03310;Dbxref=GenBank:WP_224019421.1;Name=WP_224019421.1;Ontology_term=GO:0032923,GO:0033980;gbkey=CDS;gene=aepY;go_function=phosphonopyruvate decarboxylase activity|0033980||IEA;go_process=organic phosphonate biosynthetic process|0032923||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760251.1;locus_tag=LDO50_RS03310;product=phosphonopyruvate decarboxylase;protein_id=WP_224019421.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 33852 35537 . - . ID=gene-LDO50_RS03315;Name=aepX;gbkey=Gene;gene=aepX;gene_biotype=protein_coding;locus_tag=LDO50_RS03315;old_locus_tag=BVI1335_1190028 NZ_CAJZAO010000023.1 Protein Homology CDS 33852 35537 . - 0 ID=cds-WP_045578108.1;Parent=gene-LDO50_RS03315;Dbxref=GenBank:WP_045578108.1;Name=WP_045578108.1;Ontology_term=GO:0019634,GO:0050188;gbkey=CDS;gene=aepX;go_function=phosphoenolpyruvate mutase activity|0050188||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004542643.1;locus_tag=LDO50_RS03315;product=phosphoenolpyruvate mutase;protein_id=WP_045578108.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 35534 36301 . - . ID=gene-LDO50_RS03320;Name=LDO50_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03320;old_locus_tag=BVI1335_1190029 NZ_CAJZAO010000023.1 Protein Homology CDS 35534 36301 . - 0 ID=cds-WP_011881976.1;Parent=gene-LDO50_RS03320;Dbxref=GenBank:WP_011881976.1;Name=WP_011881976.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603691.1;locus_tag=LDO50_RS03320;product=phosphocholine cytidylyltransferase family protein;protein_id=WP_011881976.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 36337 37338 . - . ID=gene-LDO50_RS03325;Name=LDO50_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03325;old_locus_tag=BVI1335_1190030 NZ_CAJZAO010000023.1 Protein Homology CDS 36337 37338 . - 0 ID=cds-WP_011881977.1;Parent=gene-LDO50_RS03325;Dbxref=GenBank:WP_011881977.1;Name=WP_011881977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399831.1;locus_tag=LDO50_RS03325;product=HpnL family protein;protein_id=WP_011881977.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 37335 38144 . - . ID=gene-LDO50_RS03330;Name=LDO50_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03330;old_locus_tag=BVI1335_1190031 NZ_CAJZAO010000023.1 Protein Homology CDS 37335 38144 . - 0 ID=cds-WP_224019422.1;Parent=gene-LDO50_RS03330;Dbxref=GenBank:WP_224019422.1;Name=WP_224019422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694707.1;locus_tag=LDO50_RS03330;product=HalD/BesD family halogenase;protein_id=WP_224019422.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 38141 38896 . - . ID=gene-LDO50_RS03335;Name=LDO50_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03335;old_locus_tag=BVI1335_1190032 NZ_CAJZAO010000023.1 Protein Homology CDS 38141 38896 . - 0 ID=cds-WP_011881979.1;Parent=gene-LDO50_RS03335;Dbxref=GenBank:WP_011881979.1;Name=WP_011881979.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603979.1;locus_tag=LDO50_RS03335;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_011881979.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 39542 41056 . + . ID=gene-LDO50_RS03340;Name=LDO50_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03340;old_locus_tag=BVI1335_1190033 NZ_CAJZAO010000023.1 Protein Homology CDS 39542 41056 . + 0 ID=cds-WP_011881980.1;Parent=gene-LDO50_RS03340;Dbxref=GenBank:WP_011881980.1;Name=WP_011881980.1;Ontology_term=GO:0006083,GO:0006084,GO:0008775;gbkey=CDS;go_function=acetate CoA-transferase activity|0008775||IEA;go_process=acetate metabolic process|0006083||IEA,acetyl-CoA metabolic process|0006084||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217176.1;locus_tag=LDO50_RS03340;product=acetyl-CoA hydrolase/transferase family protein;protein_id=WP_011881980.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 41250 41675 . + . ID=gene-LDO50_RS03345;Name=LDO50_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03345;old_locus_tag=BVI1335_1190035 NZ_CAJZAO010000023.1 Protein Homology CDS 41250 41675 . + 0 ID=cds-WP_011881981.1;Parent=gene-LDO50_RS03345;Dbxref=GenBank:WP_011881981.1;Name=WP_011881981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881981.1;locus_tag=LDO50_RS03345;product=helix-turn-helix domain-containing protein;protein_id=WP_011881981.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 41710 42588 . - . ID=gene-LDO50_RS03350;Name=LDO50_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03350;old_locus_tag=BVI1335_1190036 NZ_CAJZAO010000023.1 Protein Homology CDS 41710 42588 . - 0 ID=cds-WP_011881982.1;Parent=gene-LDO50_RS03350;Dbxref=GenBank:WP_011881982.1;Name=WP_011881982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762245.1;locus_tag=LDO50_RS03350;product=helix-hairpin-helix domain-containing protein;protein_id=WP_011881982.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq gene 42779 43339 . - . ID=gene-LDO50_RS03355;Name=LDO50_RS03355;end_range=43339,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03355;old_locus_tag=BVI1335_1190038;partial=true NZ_CAJZAO010000023.1 Protein Homology CDS 42779 43339 . - 0 ID=cds-WP_435520935.1;Parent=gene-LDO50_RS03355;Dbxref=GenBank:WP_435520935.1;Name=WP_435520935.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;end_range=43339,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484701.1;locus_tag=LDO50_RS03355;partial=true;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_435520935.1;transl_table=11 NZ_CAJZAO010000023.1 RefSeq pseudogene 43350 43509 . - . ID=gene-LDO50_RS31255;Name=LDO50_RS31255;end_range=43509,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31255;partial=true;pseudo=true;start_range=.,43350 NZ_CAJZAO010000023.1 Protein Homology CDS 43350 43509 . - 1 ID=cds-LDO50_RS31255;Parent=gene-LDO50_RS31255;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=43509,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881983.1;locus_tag=LDO50_RS31255;partial=true;product=sigma-70 family RNA polymerase sigma factor;pseudo=true;start_range=.,43350;transl_table=11 ##sequence-region NZ_CAJZAO010000024.1 1 104042 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000024.1 RefSeq region 1 104042 . + . ID=NZ_CAJZAO010000024.1:1..104042;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_12 NZ_CAJZAO010000024.1 RefSeq gene 1 391 . - . ID=gene-LDO50_RS03360;Name=LDO50_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03360;partial=true;start_range=.,1 NZ_CAJZAO010000024.1 Protein Homology CDS 1 391 . - 0 ID=cds-WP_224019424.1;Parent=gene-LDO50_RS03360;Dbxref=GenBank:WP_224019424.1;Name=WP_224019424.1;Ontology_term=GO:0010181,GO:0018580;gbkey=CDS;go_function=FMN binding|0010181||IEA,nitronate monooxygenase activity|0018580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404674.1;locus_tag=LDO50_RS03360;partial=true;product=nitronate monooxygenase;protein_id=WP_224019424.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 993 1205 . + . ID=gene-LDO50_RS03365;Name=LDO50_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03365 NZ_CAJZAO010000024.1 Protein Homology CDS 993 1205 . + 0 ID=cds-WP_176043856.1;Parent=gene-LDO50_RS03365;Dbxref=GenBank:WP_176043856.1;Name=WP_176043856.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015862.6;locus_tag=LDO50_RS03365;product=heme-binding protein;protein_id=WP_176043856.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 1202 3376 . + . ID=gene-LDO50_RS03370;Name=LDO50_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03370;old_locus_tag=BVI1335_120005 NZ_CAJZAO010000024.1 Protein Homology CDS 1202 3376 . + 0 ID=cds-WP_224019425.1;Parent=gene-LDO50_RS03370;Dbxref=GenBank:WP_224019425.1;Name=WP_224019425.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548774.1;locus_tag=LDO50_RS03370;product=malate synthase G;protein_id=WP_224019425.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 3821 5383 . + . ID=gene-LDO50_RS03375;Name=LDO50_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03375;old_locus_tag=BVI1335_120006 NZ_CAJZAO010000024.1 Protein Homology CDS 3821 5383 . + 0 ID=cds-WP_059896995.1;Parent=gene-LDO50_RS03375;Dbxref=GenBank:WP_059896995.1;Name=WP_059896995.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367143.1;locus_tag=LDO50_RS03375;product=sensor domain-containing diguanylate cyclase;protein_id=WP_059896995.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 5500 6882 . + . ID=gene-LDO50_RS03380;Name=LDO50_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03380;old_locus_tag=BVI1335_120007 NZ_CAJZAO010000024.1 Protein Homology CDS 5500 6882 . + 0 ID=cds-WP_034193757.1;Parent=gene-LDO50_RS03380;Dbxref=GenBank:WP_034193757.1;Name=WP_034193757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485933.1;locus_tag=LDO50_RS03380;product=cache domain-containing protein;protein_id=WP_034193757.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 6915 7559 . + . ID=gene-LDO50_RS03385;Name=LDO50_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03385;old_locus_tag=BVI1335_120008 NZ_CAJZAO010000024.1 Protein Homology CDS 6915 7559 . + 0 ID=cds-WP_011881156.1;Parent=gene-LDO50_RS03385;Dbxref=GenBank:WP_011881156.1;Name=WP_011881156.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367145.1;locus_tag=LDO50_RS03385;product=response regulator;protein_id=WP_011881156.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 7807 8403 . - . ID=gene-LDO50_RS03390;Name=LDO50_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03390;old_locus_tag=BVI1335_120009 NZ_CAJZAO010000024.1 Protein Homology CDS 7807 8403 . - 0 ID=cds-WP_011881155.1;Parent=gene-LDO50_RS03390;Dbxref=GenBank:WP_011881155.1;Name=WP_011881155.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894421.1;locus_tag=LDO50_RS03390;product=MlaC/ttg2D family ABC transporter substrate-binding protein;protein_id=WP_011881155.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 8732 11365 . + . ID=gene-LDO50_RS03395;Name=LDO50_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03395;old_locus_tag=BVI1335_120010 NZ_CAJZAO010000024.1 Protein Homology CDS 8732 11365 . + 0 ID=cds-WP_059561657.1;Parent=gene-LDO50_RS03395;Dbxref=GenBank:WP_059561657.1;Name=WP_059561657.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330923.1;locus_tag=LDO50_RS03395;product=MMPL family transporter;protein_id=WP_059561657.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 11358 12434 . + . ID=gene-LDO50_RS03400;Name=LDO50_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03400;old_locus_tag=BVI1335_120011 NZ_CAJZAO010000024.1 Protein Homology CDS 11358 12434 . + 0 ID=cds-WP_224019426.1;Parent=gene-LDO50_RS03400;Dbxref=GenBank:WP_224019426.1;Name=WP_224019426.1;Ontology_term=GO:0120010,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=intermembrane phospholipid transfer|0120010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760603.1;locus_tag=LDO50_RS03400;product=MlaA family lipoprotein;protein_id=WP_224019426.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 12669 13832 . - . ID=gene-LDO50_RS03405;Name=LDO50_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03405;old_locus_tag=BVI1335_120013 NZ_CAJZAO010000024.1 Protein Homology CDS 12669 13832 . - 0 ID=cds-WP_045578355.1;Parent=gene-LDO50_RS03405;Dbxref=GenBank:WP_045578355.1;Name=WP_045578355.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881152.1;locus_tag=LDO50_RS03405;product=GGDEF domain-containing protein;protein_id=WP_045578355.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq pseudogene 14020 14614 . - . ID=gene-LDO50_RS03410;Name=LDO50_RS03410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS03410;old_locus_tag=BVI1335_120014;pseudo=true NZ_CAJZAO010000024.1 Protein Homology CDS 14020 14614 . - 0 ID=cds-LDO50_RS03410;Parent=gene-LDO50_RS03410;Note=frameshifted;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397534.1;locus_tag=LDO50_RS03410;product=phosphorylase;pseudo=true;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 14669 16642 . - . ID=gene-LDO50_RS03415;Name=shc;gbkey=Gene;gene=shc;gene_biotype=protein_coding;locus_tag=LDO50_RS03415;old_locus_tag=BVI1335_120015 NZ_CAJZAO010000024.1 Protein Homology CDS 14669 16642 . - 0 ID=cds-WP_034193761.1;Parent=gene-LDO50_RS03415;Dbxref=GenBank:WP_034193761.1;Name=WP_034193761.1;Ontology_term=GO:0019746,GO:0016866,GO:0051007;gbkey=CDS;gene=shc;go_function=intramolecular transferase activity|0016866||IEA,squalene-hopene cyclase activity|0051007||IEA;go_process=hopanoid biosynthetic process|0019746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548765.1;locus_tag=LDO50_RS03415;product=squalene--hopene cyclase;protein_id=WP_034193761.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 16658 17162 . - . ID=gene-LDO50_RS31260;Name=LDO50_RS31260;end_range=17162,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31260;old_locus_tag=BVI1335_120016;partial=true NZ_CAJZAO010000024.1 Protein Homology CDS 16658 17162 . - 1 ID=cds-WP_443797708.1;Parent=gene-LDO50_RS31260;Dbxref=GenBank:WP_443797708.1;Name=WP_443797708.1;Ontology_term=GO:0016491;end_range=17162,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013591250.1;locus_tag=LDO50_RS31260;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_443797708.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 17173 17970 . - . ID=gene-LDO50_RS31265;Name=LDO50_RS31265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31265;old_locus_tag=BVI1335_120017;partial=true;start_range=.,17173 NZ_CAJZAO010000024.1 Protein Homology CDS 17173 17970 . - 0 ID=cds-WP_443797709.1;Parent=gene-LDO50_RS31265;Dbxref=GenBank:WP_443797709.1;Name=WP_443797709.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493654.1;locus_tag=LDO50_RS31265;partial=true;product=hydroxysqualene dehydroxylase;protein_id=WP_443797709.1;start_range=.,17173;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 17975 18823 . - . ID=gene-LDO50_RS03425;Name=hpnD;gbkey=Gene;gene=hpnD;gene_biotype=protein_coding;locus_tag=LDO50_RS03425;old_locus_tag=BVI1335_120018 NZ_CAJZAO010000024.1 Protein Homology CDS 17975 18823 . - 0 ID=cds-WP_014724262.1;Parent=gene-LDO50_RS03425;Dbxref=GenBank:WP_014724262.1;Name=WP_014724262.1;Ontology_term=GO:0016117,GO:0046905;gbkey=CDS;gene=hpnD;go_function=15-cis-phytoene synthase activity|0046905||IEA;go_process=carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404656.1;locus_tag=LDO50_RS03425;product=presqualene diphosphate synthase HpnD;protein_id=WP_014724262.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 19075 19407 . - . ID=gene-LDO50_RS03430;Name=LDO50_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03430;old_locus_tag=BVI1335_120019 NZ_CAJZAO010000024.1 Protein Homology CDS 19075 19407 . - 0 ID=cds-WP_046425783.1;Parent=gene-LDO50_RS03430;Dbxref=GenBank:WP_046425783.1;Name=WP_046425783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766711.1;locus_tag=LDO50_RS03430;product=hypothetical protein;protein_id=WP_046425783.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 19619 20503 . + . ID=gene-LDO50_RS03435;Name=LDO50_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03435;old_locus_tag=BVI1335_120020 NZ_CAJZAO010000024.1 Protein Homology CDS 19619 20503 . + 0 ID=cds-WP_176043860.1;Parent=gene-LDO50_RS03435;Dbxref=GenBank:WP_176043860.1;Name=WP_176043860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766712.1;locus_tag=LDO50_RS03435;product=alpha/beta fold hydrolase;protein_id=WP_176043860.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 20526 21467 . - . ID=gene-LDO50_RS03440;Name=LDO50_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03440;old_locus_tag=BVI1335_120021 NZ_CAJZAO010000024.1 Protein Homology CDS 20526 21467 . - 0 ID=cds-WP_011881145.1;Parent=gene-LDO50_RS03440;Dbxref=GenBank:WP_011881145.1;Name=WP_011881145.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881145.1;locus_tag=LDO50_RS03440;product=GGDEF domain-containing protein;protein_id=WP_011881145.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 21464 22090 . - . ID=gene-LDO50_RS03445;Name=LDO50_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03445;old_locus_tag=BVI1335_120022 NZ_CAJZAO010000024.1 Protein Homology CDS 21464 22090 . - 0 ID=cds-WP_011881144.1;Parent=gene-LDO50_RS03445;Dbxref=GenBank:WP_011881144.1;Name=WP_011881144.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530631.1;locus_tag=LDO50_RS03445;product=chemotaxis protein CheC;protein_id=WP_011881144.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 22083 22451 . - . ID=gene-LDO50_RS03450;Name=LDO50_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03450;old_locus_tag=BVI1335_120023 NZ_CAJZAO010000024.1 Protein Homology CDS 22083 22451 . - 0 ID=cds-WP_011881143.1;Parent=gene-LDO50_RS03450;Dbxref=GenBank:WP_011881143.1;Name=WP_011881143.1;Ontology_term=GO:0000160,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766715.1;locus_tag=LDO50_RS03450;product=response regulator;protein_id=WP_011881143.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 22920 25166 . + . ID=gene-LDO50_RS03455;Name=LDO50_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03455;old_locus_tag=BVI1335_120024 NZ_CAJZAO010000024.1 Protein Homology CDS 22920 25166 . + 0 ID=cds-WP_059476115.1;Parent=gene-LDO50_RS03455;Dbxref=GenBank:WP_059476115.1;Name=WP_059476115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724259.1;locus_tag=LDO50_RS03455;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_059476115.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 25223 25777 . - . ID=gene-LDO50_RS03460;Name=LDO50_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03460;old_locus_tag=BVI1335_120025 NZ_CAJZAO010000024.1 Protein Homology CDS 25223 25777 . - 0 ID=cds-WP_011881141.1;Parent=gene-LDO50_RS03460;Dbxref=GenBank:WP_011881141.1;Name=WP_011881141.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480199.1;locus_tag=LDO50_RS03460;product=NADPH-dependent FMN reductase;protein_id=WP_011881141.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 26140 26736 . + . ID=gene-LDO50_RS03465;Name=LDO50_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03465;old_locus_tag=BVI1335_120027 NZ_CAJZAO010000024.1 Protein Homology CDS 26140 26736 . + 0 ID=cds-WP_011881140.1;Parent=gene-LDO50_RS03465;Dbxref=GenBank:WP_011881140.1;Name=WP_011881140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900709.1;locus_tag=LDO50_RS03465;product=RNA polymerase factor sigma-70;protein_id=WP_011881140.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 26717 26926 . + . ID=gene-LDO50_RS03470;Name=LDO50_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03470;old_locus_tag=BVI1335_120028 NZ_CAJZAO010000024.1 Protein Homology CDS 26717 26926 . + 0 ID=cds-WP_011881139.1;Parent=gene-LDO50_RS03470;Dbxref=GenBank:WP_011881139.1;Name=WP_011881139.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881139.1;locus_tag=LDO50_RS03470;product=zf-HC2 domain-containing protein;protein_id=WP_011881139.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 27111 27467 . - . ID=gene-LDO50_RS03475;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=LDO50_RS03475;old_locus_tag=BVI1335_120029 NZ_CAJZAO010000024.1 Protein Homology CDS 27111 27467 . - 0 ID=cds-WP_014724258.1;Parent=gene-LDO50_RS03475;Dbxref=GenBank:WP_014724258.1;Name=WP_014724258.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724258.1;locus_tag=LDO50_RS03475;product=arsenate reductase (glutaredoxin);protein_id=WP_014724258.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 28530 29192 . + . ID=gene-LDO50_RS03480;Name=parA;gbkey=Gene;gene=parA;gene_biotype=protein_coding;locus_tag=LDO50_RS03480;old_locus_tag=BVI1335_120031 NZ_CAJZAO010000024.1 Protein Homology CDS 28530 29192 . + 0 ID=cds-WP_011881137.1;Parent=gene-LDO50_RS03480;Dbxref=GenBank:WP_011881137.1;Name=WP_011881137.1;gbkey=CDS;gene=parA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900706.1;locus_tag=LDO50_RS03480;product=ParA family partition ATPase;protein_id=WP_011881137.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 29216 30277 . + . ID=gene-LDO50_RS03485;Name=LDO50_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03485;old_locus_tag=BVI1335_120032 NZ_CAJZAO010000024.1 Protein Homology CDS 29216 30277 . + 0 ID=cds-WP_034193767.1;Parent=gene-LDO50_RS03485;Dbxref=GenBank:WP_034193767.1;Name=WP_034193767.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194498.1;locus_tag=LDO50_RS03485;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_034193767.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 30373 31737 . - . ID=gene-LDO50_RS03490;Name=LDO50_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03490;old_locus_tag=BVI1335_120033 NZ_CAJZAO010000024.1 Protein Homology CDS 30373 31737 . - 0 ID=cds-WP_011881135.1;Parent=gene-LDO50_RS03490;Dbxref=GenBank:WP_011881135.1;Name=WP_011881135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397554.1;locus_tag=LDO50_RS03490;product=replication initiation protein;protein_id=WP_011881135.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 33538 34719 . + . ID=gene-LDO50_RS03495;Name=LDO50_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03495;old_locus_tag=BVI1335_120036 NZ_CAJZAO010000024.1 Protein Homology CDS 33538 34719 . + 0 ID=cds-WP_045578359.1;Parent=gene-LDO50_RS03495;Dbxref=GenBank:WP_045578359.1;Name=WP_045578359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751660.1;locus_tag=LDO50_RS03495;product=DNA-binding protein;protein_id=WP_045578359.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 34860 35873 . - . ID=gene-LDO50_RS03500;Name=LDO50_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03500;old_locus_tag=BVI1335_120037 NZ_CAJZAO010000024.1 Protein Homology CDS 34860 35873 . - 0 ID=cds-WP_041494038.1;Parent=gene-LDO50_RS03500;Dbxref=GenBank:WP_041494038.1;Name=WP_041494038.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339070.1;locus_tag=LDO50_RS03500;product=tyrosine-type recombinase/integrase;protein_id=WP_041494038.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 35974 36351 . - . ID=gene-LDO50_RS03505;Name=LDO50_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03505;old_locus_tag=BVI1335_120038 NZ_CAJZAO010000024.1 Protein Homology CDS 35974 36351 . - 0 ID=cds-WP_212163386.1;Parent=gene-LDO50_RS03505;Dbxref=GenBank:WP_212163386.1;Name=WP_212163386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548749.1;locus_tag=LDO50_RS03505;product=DUF2471 family protein;protein_id=WP_212163386.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 36479 37090 . - . ID=gene-LDO50_RS03510;Name=LDO50_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03510;old_locus_tag=BVI1335_120039 NZ_CAJZAO010000024.1 Protein Homology CDS 36479 37090 . - 0 ID=cds-WP_011881131.1;Parent=gene-LDO50_RS03510;Dbxref=GenBank:WP_011881131.1;Name=WP_011881131.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009967364.1;locus_tag=LDO50_RS03510;product=helix-turn-helix domain-containing protein;protein_id=WP_011881131.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 37251 38450 . + . ID=gene-LDO50_RS03515;Name=LDO50_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03515;old_locus_tag=BVI1335_120041 NZ_CAJZAO010000024.1 Protein Homology CDS 37251 38450 . + 0 ID=cds-WP_011881130.1;Parent=gene-LDO50_RS03515;Dbxref=GenBank:WP_011881130.1;Name=WP_011881130.1;Ontology_term=GO:0009058,GO:0008890,GO:0030170;gbkey=CDS;go_function=glycine C-acetyltransferase activity|0008890||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411924.1;locus_tag=LDO50_RS03515;product=glycine C-acetyltransferase;protein_id=WP_011881130.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 38464 39492 . + . ID=gene-LDO50_RS03520;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=LDO50_RS03520;old_locus_tag=BVI1335_120042 NZ_CAJZAO010000024.1 Protein Homology CDS 38464 39492 . + 0 ID=cds-WP_011881129.1;Parent=gene-LDO50_RS03520;Dbxref=GenBank:WP_011881129.1;Name=WP_011881129.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356765.1;locus_tag=LDO50_RS03520;product=L-threonine 3-dehydrogenase;protein_id=WP_011881129.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 40212 40826 . + . ID=gene-LDO50_RS03525;Name=LDO50_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03525;old_locus_tag=BVI1335_120044 NZ_CAJZAO010000024.1 Protein Homology CDS 40212 40826 . + 0 ID=cds-WP_034193771.1;Parent=gene-LDO50_RS03525;Dbxref=GenBank:WP_034193771.1;Name=WP_034193771.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881128.1;locus_tag=LDO50_RS03525;product=TetR/AcrR family transcriptional regulator;protein_id=WP_034193771.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 40886 41365 . + . ID=gene-LDO50_RS03530;Name=LDO50_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03530;old_locus_tag=BVI1335_120047 NZ_CAJZAO010000024.1 Protein Homology CDS 40886 41365 . + 0 ID=cds-WP_011881127.1;Parent=gene-LDO50_RS03530;Dbxref=GenBank:WP_011881127.1;Name=WP_011881127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894511.1;locus_tag=LDO50_RS03530;product=nuclear transport factor 2 family protein;protein_id=WP_011881127.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 41658 42743 . - . ID=gene-LDO50_RS03535;Name=LDO50_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03535;old_locus_tag=BVI1335_120048 NZ_CAJZAO010000024.1 Protein Homology CDS 41658 42743 . - 0 ID=cds-WP_034193772.1;Parent=gene-LDO50_RS03535;Dbxref=GenBank:WP_034193772.1;Name=WP_034193772.1;Ontology_term=GO:0046395,GO:0009027,GO:0051287;gbkey=CDS;go_function=tartrate dehydrogenase activity|0009027||IEA,NAD binding|0051287||IEA;go_process=carboxylic acid catabolic process|0046395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659912.1;locus_tag=LDO50_RS03535;product=tartrate dehydrogenase;protein_id=WP_034193772.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 42862 43785 . + . ID=gene-LDO50_RS03540;Name=LDO50_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03540;old_locus_tag=BVI1335_120049 NZ_CAJZAO010000024.1 Protein Homology CDS 42862 43785 . + 0 ID=cds-WP_011881125.1;Parent=gene-LDO50_RS03540;Dbxref=GenBank:WP_011881125.1;Name=WP_011881125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881125.1;locus_tag=LDO50_RS03540;product=LysR substrate-binding domain-containing protein;protein_id=WP_011881125.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 44002 44949 . - . ID=gene-LDO50_RS03545;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=LDO50_RS03545;old_locus_tag=BVI1335_120050 NZ_CAJZAO010000024.1 Protein Homology CDS 44002 44949 . - 0 ID=cds-WP_034193773.1;Parent=gene-LDO50_RS03545;Dbxref=GenBank:WP_034193773.1;Name=WP_034193773.1;Ontology_term=GO:0006526,GO:0003942,GO:0005737;gbkey=CDS;gene=argC;go_component=cytoplasm|0005737||IEA;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881124.1;locus_tag=LDO50_RS03545;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_034193773.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 45068 45952 . + . ID=gene-LDO50_RS03550;Name=LDO50_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03550;old_locus_tag=BVI1335_120051 NZ_CAJZAO010000024.1 Protein Homology CDS 45068 45952 . + 0 ID=cds-WP_011881123.1;Parent=gene-LDO50_RS03550;Dbxref=GenBank:WP_011881123.1;Name=WP_011881123.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548739.1;locus_tag=LDO50_RS03550;product=LysR family transcriptional regulator;protein_id=WP_011881123.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 46017 46481 . - . ID=gene-LDO50_RS03555;Name=LDO50_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03555;old_locus_tag=BVI1335_120052 NZ_CAJZAO010000024.1 Protein Homology CDS 46017 46481 . - 0 ID=cds-WP_011881122.1;Parent=gene-LDO50_RS03555;Dbxref=GenBank:WP_011881122.1;Name=WP_011881122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751648.1;locus_tag=LDO50_RS03555;product=hypothetical protein;protein_id=WP_011881122.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 46539 47756 . - . ID=gene-LDO50_RS03560;Name=LDO50_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03560;old_locus_tag=BVI1335_120053 NZ_CAJZAO010000024.1 Protein Homology CDS 46539 47756 . - 0 ID=cds-WP_014724249.1;Parent=gene-LDO50_RS03560;Dbxref=GenBank:WP_014724249.1;Name=WP_014724249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194462.1;locus_tag=LDO50_RS03560;product=DUF3734 domain-containing protein;protein_id=WP_014724249.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 47887 48672 . - . ID=gene-LDO50_RS03565;Name=LDO50_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03565;old_locus_tag=BVI1335_120054 NZ_CAJZAO010000024.1 Protein Homology CDS 47887 48672 . - 0 ID=cds-WP_011881120.1;Parent=gene-LDO50_RS03565;Dbxref=GenBank:WP_011881120.1;Name=WP_011881120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604033.1;locus_tag=LDO50_RS03565;product=3-hydroxybutyrate dehydrogenase;protein_id=WP_011881120.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 48726 49466 . - . ID=gene-LDO50_RS03570;Name=LDO50_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03570;old_locus_tag=BVI1335_120055 NZ_CAJZAO010000024.1 Protein Homology CDS 48726 49466 . - 0 ID=cds-WP_014724247.1;Parent=gene-LDO50_RS03570;Dbxref=GenBank:WP_014724247.1;Name=WP_014724247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724247.1;locus_tag=LDO50_RS03570;product=acetoacetate decarboxylase;protein_id=WP_014724247.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 49903 50484 . + . ID=gene-LDO50_RS03575;Name=LDO50_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03575;old_locus_tag=BVI1335_120057 NZ_CAJZAO010000024.1 Protein Homology CDS 49903 50484 . + 0 ID=cds-WP_014724246.1;Parent=gene-LDO50_RS03575;Dbxref=GenBank:WP_014724246.1;Name=WP_014724246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411912.1;locus_tag=LDO50_RS03575;product=undecaprenyl-diphosphatase;protein_id=WP_014724246.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 50522 50746 . - . ID=gene-LDO50_RS03580;Name=LDO50_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03580;old_locus_tag=BVI1335_120058 NZ_CAJZAO010000024.1 Protein Homology CDS 50522 50746 . - 0 ID=cds-WP_224019428.1;Parent=gene-LDO50_RS03580;Dbxref=GenBank:WP_224019428.1;Name=WP_224019428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756670.1;locus_tag=LDO50_RS03580;product=hypothetical protein;protein_id=WP_224019428.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 50864 51697 . - . ID=gene-LDO50_RS03585;Name=LDO50_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03585;old_locus_tag=BVI1335_120059 NZ_CAJZAO010000024.1 Protein Homology CDS 50864 51697 . - 0 ID=cds-WP_011881116.1;Parent=gene-LDO50_RS03585;Dbxref=GenBank:WP_011881116.1;Name=WP_011881116.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724244.1;locus_tag=LDO50_RS03585;product=siderophore-interacting protein;protein_id=WP_011881116.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 51735 52445 . - . ID=gene-LDO50_RS03590;Name=LDO50_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03590;old_locus_tag=BVI1335_120061 NZ_CAJZAO010000024.1 Protein Homology CDS 51735 52445 . - 0 ID=cds-WP_034193433.1;Parent=gene-LDO50_RS03590;Dbxref=GenBank:WP_034193433.1;Name=WP_034193433.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548732.1;locus_tag=LDO50_RS03590;product=PadR family transcriptional regulator;protein_id=WP_034193433.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 53105 53617 . + . ID=gene-LDO50_RS03595;Name=LDO50_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03595;old_locus_tag=BVI1335_120063 NZ_CAJZAO010000024.1 Protein Homology CDS 53105 53617 . + 0 ID=cds-WP_011881114.1;Parent=gene-LDO50_RS03595;Dbxref=GenBank:WP_011881114.1;Name=WP_011881114.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881114.1;locus_tag=LDO50_RS03595;product=fimbrial protein;protein_id=WP_011881114.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 53682 56159 . + . ID=gene-LDO50_RS03600;Name=LDO50_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03600;old_locus_tag=BVI1335_120064 NZ_CAJZAO010000024.1 Protein Homology CDS 53682 56159 . + 0 ID=cds-WP_069246397.1;Parent=gene-LDO50_RS03600;Dbxref=GenBank:WP_069246397.1;Name=WP_069246397.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881113.1;locus_tag=LDO50_RS03600;product=fimbria/pilus outer membrane usher protein;protein_id=WP_069246397.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 56160 56897 . + . ID=gene-LDO50_RS03605;Name=LDO50_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03605;old_locus_tag=BVI1335_120066 NZ_CAJZAO010000024.1 Protein Homology CDS 56160 56897 . + 0 ID=cds-WP_372586078.1;Parent=gene-LDO50_RS03605;Dbxref=GenBank:WP_372586078.1;Name=WP_372586078.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724239.1;locus_tag=LDO50_RS03605;product=fimbrial biogenesis chaperone;protein_id=WP_372586078.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 56894 57931 . + . ID=gene-LDO50_RS03610;Name=LDO50_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03610;old_locus_tag=BVI1335_120065 NZ_CAJZAO010000024.1 Protein Homology CDS 56894 57931 . + 0 ID=cds-WP_060122673.1;Parent=gene-LDO50_RS03610;Dbxref=GenBank:WP_060122673.1;Name=WP_060122673.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881111.1;locus_tag=LDO50_RS03610;product=fimbrial protein;protein_id=WP_060122673.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 58346 59497 . + . ID=gene-LDO50_RS03615;Name=LDO50_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03615;old_locus_tag=BVI1335_120068 NZ_CAJZAO010000024.1 Protein Homology CDS 58346 59497 . + 0 ID=cds-WP_043291983.1;Parent=gene-LDO50_RS03615;Dbxref=GenBank:WP_043291983.1;Name=WP_043291983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724238.1;locus_tag=LDO50_RS03615;product=TDT family transporter;protein_id=WP_043291983.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 59602 60588 . + . ID=gene-LDO50_RS03620;Name=LDO50_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03620;old_locus_tag=BVI1335_120069 NZ_CAJZAO010000024.1 Protein Homology CDS 59602 60588 . + 0 ID=cds-WP_224019427.1;Parent=gene-LDO50_RS03620;Dbxref=GenBank:WP_224019427.1;Name=WP_224019427.1;Ontology_term=GO:0006108,GO:0016615;gbkey=CDS;go_function=malate dehydrogenase activity|0016615||IEA;go_process=malate metabolic process|0006108||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881108.1;locus_tag=LDO50_RS03620;product=malate dehydrogenase;protein_id=WP_224019427.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 60679 61455 . + . ID=gene-LDO50_RS03625;Name=LDO50_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03625;old_locus_tag=BVI1335_120071 NZ_CAJZAO010000024.1 Protein Homology CDS 60679 61455 . + 0 ID=cds-WP_011881107.1;Parent=gene-LDO50_RS03625;Dbxref=GenBank:WP_011881107.1;Name=WP_011881107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724236.1;locus_tag=LDO50_RS03625;product=substrate-binding domain-containing protein;protein_id=WP_011881107.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 62226 63176 . + . ID=gene-LDO50_RS03630;Name=LDO50_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03630;old_locus_tag=BVI1335_120072 NZ_CAJZAO010000024.1 Protein Homology CDS 62226 63176 . + 0 ID=cds-WP_081071311.1;Parent=gene-LDO50_RS03630;Dbxref=GenBank:WP_081071311.1;Name=WP_081071311.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724235.1;locus_tag=LDO50_RS03630;product=helix-turn-helix domain-containing protein;protein_id=WP_081071311.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 63298 63729 . + . ID=gene-LDO50_RS03635;Name=LDO50_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03635;old_locus_tag=BVI1335_120073 NZ_CAJZAO010000024.1 Protein Homology CDS 63298 63729 . + 0 ID=cds-WP_140993157.1;Parent=gene-LDO50_RS03635;Dbxref=GenBank:WP_140993157.1;Name=WP_140993157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405745.1;locus_tag=LDO50_RS03635;product=DUF3331 domain-containing protein;protein_id=WP_140993157.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 63849 64757 . - . ID=gene-LDO50_RS03640;Name=LDO50_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03640;old_locus_tag=BVI1335_120074 NZ_CAJZAO010000024.1 Protein Homology CDS 63849 64757 . - 0 ID=cds-WP_011881104.1;Parent=gene-LDO50_RS03640;Dbxref=GenBank:WP_011881104.1;Name=WP_011881104.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724233.1;locus_tag=LDO50_RS03640;product=LysR family transcriptional regulator;protein_id=WP_011881104.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq pseudogene 64854 65191 . - . ID=gene-LDO50_RS03645;Name=LDO50_RS03645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS03645;old_locus_tag=BVI1335_120075;pseudo=true NZ_CAJZAO010000024.1 Protein Homology CDS 64854 65191 . - 0 ID=cds-LDO50_RS03645;Parent=gene-LDO50_RS03645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757462.1;locus_tag=LDO50_RS03645;product=DUF4148 domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 65297 66286 . - . ID=gene-LDO50_RS03650;Name=LDO50_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03650;old_locus_tag=BVI1335_120076 NZ_CAJZAO010000024.1 Protein Homology CDS 65297 66286 . - 0 ID=cds-WP_011881102.1;Parent=gene-LDO50_RS03650;Dbxref=GenBank:WP_011881102.1;Name=WP_011881102.1;Ontology_term=GO:0006119,GO:0009055,GO:0005886,GO:0070069;gbkey=CDS;go_component=plasma membrane|0005886||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=oxidative phosphorylation|0006119||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012404928.1;locus_tag=LDO50_RS03650;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_011881102.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 66341 67735 . - . ID=gene-LDO50_RS03655;Name=LDO50_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03655;old_locus_tag=BVI1335_120077 NZ_CAJZAO010000024.1 Protein Homology CDS 66341 67735 . - 0 ID=cds-WP_011881101.1;Parent=gene-LDO50_RS03655;Dbxref=GenBank:WP_011881101.1;Name=WP_011881101.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881101.1;locus_tag=LDO50_RS03655;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_011881101.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 67725 70073 . - . ID=gene-LDO50_RS03660;Name=LDO50_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03660;old_locus_tag=BVI1335_120078 NZ_CAJZAO010000024.1 Protein Homology CDS 67725 70073 . - 0 ID=cds-WP_059734644.1;Parent=gene-LDO50_RS03660;Dbxref=GenBank:WP_059734644.1;Name=WP_059734644.1;Ontology_term=GO:0016491,GO:0030151,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724231.1;locus_tag=LDO50_RS03660;product=FdhF/YdeP family oxidoreductase;protein_id=WP_059734644.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 70200 70544 . - . ID=gene-LDO50_RS03665;Name=LDO50_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03665;old_locus_tag=BVI1335_120079 NZ_CAJZAO010000024.1 Protein Homology CDS 70200 70544 . - 0 ID=cds-WP_034193425.1;Parent=gene-LDO50_RS03665;Dbxref=GenBank:WP_034193425.1;Name=WP_034193425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881099.1;locus_tag=LDO50_RS03665;product=hypothetical protein;protein_id=WP_034193425.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 70932 71876 . - . ID=gene-LDO50_RS03670;Name=LDO50_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03670;old_locus_tag=BVI1335_120080 NZ_CAJZAO010000024.1 Protein Homology CDS 70932 71876 . - 0 ID=cds-WP_060044724.1;Parent=gene-LDO50_RS03670;Dbxref=GenBank:WP_060044724.1;Name=WP_060044724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756658.1;locus_tag=LDO50_RS03670;product=aldo/keto reductase;protein_id=WP_060044724.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 72169 72789 . - . ID=gene-LDO50_RS03675;Name=LDO50_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03675;old_locus_tag=BVI1335_120081 NZ_CAJZAO010000024.1 Protein Homology CDS 72169 72789 . - 0 ID=cds-WP_011881096.1;Parent=gene-LDO50_RS03675;Dbxref=GenBank:WP_011881096.1;Name=WP_011881096.1;Ontology_term=GO:0006865,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894570.1;locus_tag=LDO50_RS03675;product=LysE/ArgO family amino acid transporter;protein_id=WP_011881096.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 72894 73787 . + . ID=gene-LDO50_RS03680;Name=LDO50_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03680;old_locus_tag=BVI1335_120082 NZ_CAJZAO010000024.1 Protein Homology CDS 72894 73787 . + 0 ID=cds-WP_059460625.1;Parent=gene-LDO50_RS03680;Dbxref=GenBank:WP_059460625.1;Name=WP_059460625.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028391.1;locus_tag=LDO50_RS03680;product=LysR family transcriptional regulator ArgP;protein_id=WP_059460625.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 73838 74584 . - . ID=gene-LDO50_RS03685;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=LDO50_RS03685;old_locus_tag=BVI1335_120083 NZ_CAJZAO010000024.1 Protein Homology CDS 73838 74584 . - 0 ID=cds-WP_011881094.1;Parent=gene-LDO50_RS03685;Dbxref=GenBank:WP_011881094.1;Name=WP_011881094.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=fnr;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894572.1;locus_tag=LDO50_RS03685;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_011881094.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 74710 75177 . - . ID=gene-LDO50_RS03690;Name=LDO50_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03690;old_locus_tag=BVI1335_120084 NZ_CAJZAO010000024.1 Protein Homology CDS 74710 75177 . - 0 ID=cds-WP_045578369.1;Parent=gene-LDO50_RS03690;Dbxref=GenBank:WP_045578369.1;Name=WP_045578369.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881093.1;locus_tag=LDO50_RS03690;product=universal stress protein;protein_id=WP_045578369.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 75358 75621 . - . ID=gene-LDO50_RS03695;Name=LDO50_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03695;old_locus_tag=BVI1335_120085 NZ_CAJZAO010000024.1 GeneMarkS-2+ CDS 75358 75621 . - 0 ID=cds-WP_011881092.1;Parent=gene-LDO50_RS03695;Dbxref=GenBank:WP_011881092.1;Name=WP_011881092.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS03695;product=hypothetical protein;protein_id=WP_011881092.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 75860 76093 . + . ID=gene-LDO50_RS03700;Name=LDO50_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03700;old_locus_tag=BVI1335_120086 NZ_CAJZAO010000024.1 Protein Homology CDS 75860 76093 . + 0 ID=cds-WP_011659947.1;Parent=gene-LDO50_RS03700;Dbxref=GenBank:WP_011659947.1;Name=WP_011659947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900672.1;locus_tag=LDO50_RS03700;product=hypothetical protein;protein_id=WP_011659947.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 76229 77149 . + . ID=gene-LDO50_RS03705;Name=epsC;gbkey=Gene;gene=epsC;gene_biotype=protein_coding;locus_tag=LDO50_RS03705;old_locus_tag=BVI1335_120087 NZ_CAJZAO010000024.1 Protein Homology CDS 76229 77149 . + 0 ID=cds-WP_034193451.1;Parent=gene-LDO50_RS03705;Dbxref=GenBank:WP_034193451.1;Name=WP_034193451.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=epsC;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756651.1;locus_tag=LDO50_RS03705;product=serine O-acetyltransferase EpsC;protein_id=WP_034193451.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 77335 78138 . - . ID=gene-LDO50_RS03710;Name=LDO50_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03710;old_locus_tag=BVI1335_120088 NZ_CAJZAO010000024.1 Protein Homology CDS 77335 78138 . - 0 ID=cds-WP_011881090.1;Parent=gene-LDO50_RS03710;Dbxref=GenBank:WP_011881090.1;Name=WP_011881090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494586.1;locus_tag=LDO50_RS03710;product=SDR family oxidoreductase;protein_id=WP_011881090.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 78138 78767 . - . ID=gene-LDO50_RS03715;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=LDO50_RS03715;old_locus_tag=BVI1335_120089 NZ_CAJZAO010000024.1 Protein Homology CDS 78138 78767 . - 0 ID=cds-WP_011881089.1;Parent=gene-LDO50_RS03715;Dbxref=GenBank:WP_011881089.1;Name=WP_011881089.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756649.1;locus_tag=LDO50_RS03715;product=GTP cyclohydrolase I FolE;protein_id=WP_011881089.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 78879 79805 . - . ID=gene-LDO50_RS03720;Name=LDO50_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03720;old_locus_tag=BVI1335_120090 NZ_CAJZAO010000024.1 Protein Homology CDS 78879 79805 . - 0 ID=cds-WP_011881088.1;Parent=gene-LDO50_RS03720;Dbxref=GenBank:WP_011881088.1;Name=WP_011881088.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532449.1;locus_tag=LDO50_RS03720;product=LysR family transcriptional regulator;protein_id=WP_011881088.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 79922 81154 . + . ID=gene-LDO50_RS03725;Name=pobA;gbkey=Gene;gene=pobA;gene_biotype=protein_coding;locus_tag=LDO50_RS03725;old_locus_tag=BVI1335_120091 NZ_CAJZAO010000024.1 Protein Homology CDS 79922 81154 . + 0 ID=cds-WP_034193420.1;Parent=gene-LDO50_RS03725;Dbxref=GenBank:WP_034193420.1;Name=WP_034193420.1;Ontology_term=GO:0043639,GO:0018659,GO:0050660;gbkey=CDS;gene=pobA;go_function=4-hydroxybenzoate 3-monooxygenase activity|0018659||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=benzoate catabolic process|0043639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766752.1;locus_tag=LDO50_RS03725;product=4-hydroxybenzoate 3-monooxygenase;protein_id=WP_034193420.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 81297 82010 . + . ID=gene-LDO50_RS03730;Name=LDO50_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03730;old_locus_tag=BVI1335_120092 NZ_CAJZAO010000024.1 Protein Homology CDS 81297 82010 . + 0 ID=cds-WP_011881086.1;Parent=gene-LDO50_RS03730;Dbxref=GenBank:WP_011881086.1;Name=WP_011881086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009945766.1;locus_tag=LDO50_RS03730;product=3-oxoacid CoA-transferase subunit A;protein_id=WP_011881086.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 82079 82735 . + . ID=gene-LDO50_RS03735;Name=LDO50_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03735;old_locus_tag=BVI1335_120093 NZ_CAJZAO010000024.1 Protein Homology CDS 82079 82735 . + 0 ID=cds-WP_011881085.1;Parent=gene-LDO50_RS03735;Dbxref=GenBank:WP_011881085.1;Name=WP_011881085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194517.1;locus_tag=LDO50_RS03735;product=CoA transferase subunit B;protein_id=WP_011881085.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 82824 84182 . + . ID=gene-LDO50_RS03740;Name=LDO50_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03740;old_locus_tag=BVI1335_120094 NZ_CAJZAO010000024.1 Protein Homology CDS 82824 84182 . + 0 ID=cds-WP_011881084.1;Parent=gene-LDO50_RS03740;Dbxref=GenBank:WP_011881084.1;Name=WP_011881084.1;Ontology_term=GO:0019619,GO:0047472;gbkey=CDS;go_function=3-carboxy-cis%2Ccis-muconate cycloisomerase activity|0047472||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480130.1;locus_tag=LDO50_RS03740;product=3-carboxy-cis%2Ccis-muconate cycloisomerase;protein_id=WP_011881084.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 84199 84984 . + . ID=gene-LDO50_RS03745;Name=pcaD;gbkey=Gene;gene=pcaD;gene_biotype=protein_coding;locus_tag=LDO50_RS03745;old_locus_tag=BVI1335_120095 NZ_CAJZAO010000024.1 Protein Homology CDS 84199 84984 . + 0 ID=cds-WP_034193418.1;Parent=gene-LDO50_RS03745;Dbxref=GenBank:WP_034193418.1;Name=WP_034193418.1;Ontology_term=GO:0042952,GO:0047570;gbkey=CDS;gene=pcaD;go_function=3-oxoadipate enol-lactonase activity|0047570||IEA;go_process=beta-ketoadipate pathway|0042952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010117629.1;locus_tag=LDO50_RS03745;product=3-oxoadipate enol-lactonase;protein_id=WP_034193418.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 84995 85381 . + . ID=gene-LDO50_RS03750;Name=pcaC;gbkey=Gene;gene=pcaC;gene_biotype=protein_coding;locus_tag=LDO50_RS03750;old_locus_tag=BVI1335_120096 NZ_CAJZAO010000024.1 Protein Homology CDS 84995 85381 . + 0 ID=cds-WP_011881082.1;Parent=gene-LDO50_RS03750;Dbxref=GenBank:WP_011881082.1;Name=WP_011881082.1;Ontology_term=GO:0047575;gbkey=CDS;gene=pcaC;go_function=4-carboxymuconolactone decarboxylase activity|0047575||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749282.1;locus_tag=LDO50_RS03750;product=4-carboxymuconolactone decarboxylase;protein_id=WP_011881082.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 85619 86977 . + . ID=gene-LDO50_RS03755;Name=LDO50_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03755;old_locus_tag=BVI1335_120097 NZ_CAJZAO010000024.1 Protein Homology CDS 85619 86977 . + 0 ID=cds-WP_059669322.1;Parent=gene-LDO50_RS03755;Dbxref=GenBank:WP_059669322.1;Name=WP_059669322.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756642.1;locus_tag=LDO50_RS03755;product=MFS transporter;protein_id=WP_059669322.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 87099 87347 . - . ID=gene-LDO50_RS03760;Name=LDO50_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03760;old_locus_tag=BVI1335_120098 NZ_CAJZAO010000024.1 Protein Homology CDS 87099 87347 . - 0 ID=cds-WP_011881080.1;Parent=gene-LDO50_RS03760;Dbxref=GenBank:WP_011881080.1;Name=WP_011881080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749284.1;locus_tag=LDO50_RS03760;product=hypothetical protein;protein_id=WP_011881080.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 87458 88075 . - . ID=gene-LDO50_RS03765;Name=LDO50_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03765;old_locus_tag=BVI1335_120099 NZ_CAJZAO010000024.1 Protein Homology CDS 87458 88075 . - 0 ID=cds-WP_011881079.1;Parent=gene-LDO50_RS03765;Dbxref=GenBank:WP_011881079.1;Name=WP_011881079.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480126.1;locus_tag=LDO50_RS03765;product=LysE family translocator;protein_id=WP_011881079.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq pseudogene 88846 89367 . + . ID=gene-LDO50_RS03775;Name=LDO50_RS03775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS03775;old_locus_tag=BVI1335_120103;partial=true;pseudo=true;start_range=.,88846 NZ_CAJZAO010000024.1 Protein Homology CDS 88846 89367 . + 0 ID=cds-LDO50_RS03775;Parent=gene-LDO50_RS03775;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750208.1;locus_tag=LDO50_RS03775;partial=true;product=amidohydrolase family protein;pseudo=true;start_range=.,88846;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 89389 90252 . - . ID=gene-LDO50_RS03780;Name=LDO50_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03780;old_locus_tag=BVI1335_120104 NZ_CAJZAO010000024.1 Protein Homology CDS 89389 90252 . - 0 ID=cds-WP_011881077.1;Parent=gene-LDO50_RS03780;Dbxref=GenBank:WP_011881077.1;Name=WP_011881077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881077.1;locus_tag=LDO50_RS03780;product=LysR substrate-binding domain-containing protein;protein_id=WP_011881077.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 90536 91273 . - . ID=gene-LDO50_RS03785;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=LDO50_RS03785;old_locus_tag=BVI1335_120106 NZ_CAJZAO010000024.1 Protein Homology CDS 90536 91273 . - 0 ID=cds-WP_011881076.1;Parent=gene-LDO50_RS03785;Dbxref=GenBank:WP_011881076.1;Name=WP_011881076.1;Ontology_term=GO:0006355,GO:0006547,GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-histidine metabolic process|0006547||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766658.1;locus_tag=LDO50_RS03785;product=histidine utilization repressor;protein_id=WP_011881076.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq pseudogene 91305 91634 . - . ID=gene-LDO50_RS03790;Name=LDO50_RS03790;end_range=91634,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS03790;old_locus_tag=BVI1335_120107;partial=true;pseudo=true NZ_CAJZAO010000024.1 Protein Homology CDS 91305 91634 . - 0 ID=cds-LDO50_RS03790;Parent=gene-LDO50_RS03790;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=91634,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766657.1;locus_tag=LDO50_RS03790;partial=true;product=cupin domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 91646 92410 . - . ID=gene-LDO50_RS03795;Name=LDO50_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03795;old_locus_tag=BVI1335_120108 NZ_CAJZAO010000024.1 Protein Homology CDS 91646 92410 . - 0 ID=cds-WP_069246400.1;Parent=gene-LDO50_RS03795;Dbxref=GenBank:WP_069246400.1;Name=WP_069246400.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659830.1;locus_tag=LDO50_RS03795;product=SDR family oxidoreductase;protein_id=WP_069246400.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 93128 93838 . + . ID=gene-LDO50_RS03800;Name=LDO50_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03800;old_locus_tag=BVI1335_120109 NZ_CAJZAO010000024.1 Protein Homology CDS 93128 93838 . + 0 ID=cds-WP_059475319.1;Parent=gene-LDO50_RS03800;Dbxref=GenBank:WP_059475319.1;Name=WP_059475319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659829.1;locus_tag=LDO50_RS03800;product=YceH family protein;protein_id=WP_059475319.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 93993 95123 . + . ID=gene-LDO50_RS03805;Name=LDO50_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03805;old_locus_tag=BVI1335_120110 NZ_CAJZAO010000024.1 Protein Homology CDS 93993 95123 . + 0 ID=cds-WP_011881071.1;Parent=gene-LDO50_RS03805;Dbxref=GenBank:WP_011881071.1;Name=WP_011881071.1;Ontology_term=GO:0009073,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548832.1;locus_tag=LDO50_RS03805;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_011881071.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 95568 95996 . + . ID=gene-LDO50_RS03815;Name=LDO50_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03815;old_locus_tag=BVI1335_120112 NZ_CAJZAO010000024.1 Protein Homology CDS 95568 95996 . + 0 ID=cds-WP_011881069.1;Parent=gene-LDO50_RS03815;Dbxref=GenBank:WP_011881069.1;Name=WP_011881069.1;Ontology_term=GO:0019684,GO:0009055;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;go_process=photosynthesis%2C light reaction|0019684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881069.1;locus_tag=LDO50_RS03815;product=PRC-barrel domain-containing protein;protein_id=WP_011881069.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 96263 98341 . + . ID=gene-LDO50_RS03820;Name=LDO50_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03820;old_locus_tag=BVI1335_120113 NZ_CAJZAO010000024.1 Protein Homology CDS 96263 98341 . + 0 ID=cds-WP_011881068.1;Parent=gene-LDO50_RS03820;Dbxref=GenBank:WP_011881068.1;Name=WP_011881068.1;Ontology_term=GO:0009267,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603803.1;locus_tag=LDO50_RS03820;product=carbon starvation CstA family protein;protein_id=WP_011881068.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 98354 98560 . + . ID=gene-LDO50_RS03825;Name=LDO50_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03825;old_locus_tag=BVI1335_120114 NZ_CAJZAO010000024.1 Protein Homology CDS 98354 98560 . + 0 ID=cds-WP_011881067.1;Parent=gene-LDO50_RS03825;Dbxref=GenBank:WP_011881067.1;Name=WP_011881067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523392.1;locus_tag=LDO50_RS03825;product=YbdD/YjiX family protein;protein_id=WP_011881067.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 98756 99376 . + . ID=gene-LDO50_RS03830;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=LDO50_RS03830;old_locus_tag=BVI1335_120115 NZ_CAJZAO010000024.1 Protein Homology CDS 98756 99376 . + 0 ID=cds-WP_011881066.1;Parent=gene-LDO50_RS03830;Dbxref=GenBank:WP_011881066.1;Name=WP_011881066.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009914721.1;locus_tag=LDO50_RS03830;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_011881066.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 99398 99829 . - . ID=gene-LDO50_RS03835;Name=LDO50_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03835;old_locus_tag=BVI1335_120116 NZ_CAJZAO010000024.1 Protein Homology CDS 99398 99829 . - 0 ID=cds-WP_011881065.1;Parent=gene-LDO50_RS03835;Dbxref=GenBank:WP_011881065.1;Name=WP_011881065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881065.1;locus_tag=LDO50_RS03835;product=nuclear transport factor 2 family protein;protein_id=WP_011881065.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 99923 100276 . - . ID=gene-LDO50_RS03840;Name=LDO50_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03840;old_locus_tag=BVI1335_120117 NZ_CAJZAO010000024.1 Protein Homology CDS 99923 100276 . - 0 ID=cds-WP_045578374.1;Parent=gene-LDO50_RS03840;Dbxref=GenBank:WP_045578374.1;Name=WP_045578374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548877.1;locus_tag=LDO50_RS03840;product=DOPA 4%2C5-dioxygenase family protein;protein_id=WP_045578374.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 100766 101143 . + . ID=gene-LDO50_RS03845;Name=LDO50_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03845;old_locus_tag=BVI1335_120119 NZ_CAJZAO010000024.1 Protein Homology CDS 100766 101143 . + 0 ID=cds-WP_011881063.1;Parent=gene-LDO50_RS03845;Dbxref=GenBank:WP_011881063.1;Name=WP_011881063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548878.1;locus_tag=LDO50_RS03845;product=hypothetical protein;protein_id=WP_011881063.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 101390 102550 . - . ID=gene-LDO50_RS03850;Name=hpnH;gbkey=Gene;gene=hpnH;gene_biotype=protein_coding;locus_tag=LDO50_RS03850;old_locus_tag=BVI1335_120120 NZ_CAJZAO010000024.1 Protein Homology CDS 101390 102550 . - 0 ID=cds-WP_011881062.1;Parent=gene-LDO50_RS03850;Dbxref=GenBank:WP_011881062.1;Name=WP_011881062.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;gene=hpnH;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602855.1;locus_tag=LDO50_RS03850;product=adenosyl-hopene transferase HpnH;protein_id=WP_011881062.1;transl_table=11 NZ_CAJZAO010000024.1 RefSeq gene 102563 103504 . - . ID=gene-LDO50_RS03855;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=LDO50_RS03855;old_locus_tag=BVI1335_120121 NZ_CAJZAO010000024.1 Protein Homology CDS 102563 103504 . - 0 ID=cds-WP_011881061.1;Parent=gene-LDO50_RS03855;Dbxref=GenBank:WP_011881061.1;Name=WP_011881061.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894247.1;locus_tag=LDO50_RS03855;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_011881061.1;transl_table=11 ##sequence-region NZ_CAJZAO010000025.1 1 27851 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000025.1 RefSeq region 1 27851 . + . ID=NZ_CAJZAO010000025.1:1..27851;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_120 NZ_CAJZAO010000025.1 RefSeq pseudogene 1 180 . + . ID=gene-LDO50_RS03860;Name=LDO50_RS03860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS03860;old_locus_tag=BVI1335_1200001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000025.1 Protein Homology CDS 1 180 . + 0 ID=cds-LDO50_RS03860;Parent=gene-LDO50_RS03860;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885122.1;locus_tag=LDO50_RS03860;partial=true;product=glutamine cyclotransferase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 307 1290 . + . ID=gene-LDO50_RS03865;Name=LDO50_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03865;old_locus_tag=BVI1335_1200002 NZ_CAJZAO010000025.1 Protein Homology CDS 307 1290 . + 0 ID=cds-WP_014723206.1;Parent=gene-LDO50_RS03865;Dbxref=GenBank:WP_014723206.1;Name=WP_014723206.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549553.1;locus_tag=LDO50_RS03865;product=DMT family transporter;protein_id=WP_014723206.1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 1376 1699 . - . ID=gene-LDO50_RS03870;Name=LDO50_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03870;old_locus_tag=BVI1335_1200003 NZ_CAJZAO010000025.1 Protein Homology CDS 1376 1699 . - 0 ID=cds-WP_011885124.1;Parent=gene-LDO50_RS03870;Dbxref=GenBank:WP_011885124.1;Name=WP_011885124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890481.1;locus_tag=LDO50_RS03870;product=RnfH family protein;protein_id=WP_011885124.1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 1704 2141 . - . ID=gene-LDO50_RS03875;Name=LDO50_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03875;old_locus_tag=BVI1335_1200004 NZ_CAJZAO010000025.1 Protein Homology CDS 1704 2141 . - 0 ID=cds-WP_011885125.1;Parent=gene-LDO50_RS03875;Dbxref=GenBank:WP_011885125.1;Name=WP_011885125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904866.1;locus_tag=LDO50_RS03875;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_011885125.1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 2240 2686 . + . ID=gene-LDO50_RS03880;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=LDO50_RS03880;old_locus_tag=BVI1335_1200005 NZ_CAJZAO010000025.1 Protein Homology CDS 2240 2686 . + 0 ID=cds-WP_006478511.1;Parent=gene-LDO50_RS03880;Dbxref=GenBank:WP_006478511.1;Name=WP_006478511.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193190.1;locus_tag=LDO50_RS03880;product=SsrA-binding protein SmpB;protein_id=WP_006478511.1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 2903 3838 . - . ID=gene-LDO50_RS03885;Name=LDO50_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03885;old_locus_tag=BVI1335_1200006 NZ_CAJZAO010000025.1 Protein Homology CDS 2903 3838 . - 0 ID=cds-WP_011885126.1;Parent=gene-LDO50_RS03885;Dbxref=GenBank:WP_011885126.1;Name=WP_011885126.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758549.1;locus_tag=LDO50_RS03885;product=SPFH domain-containing protein;protein_id=WP_011885126.1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 3872 4306 . - . ID=gene-LDO50_RS03890;Name=LDO50_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03890;old_locus_tag=BVI1335_1200007 NZ_CAJZAO010000025.1 Protein Homology CDS 3872 4306 . - 0 ID=cds-WP_011885127.1;Parent=gene-LDO50_RS03890;Dbxref=GenBank:WP_011885127.1;Name=WP_011885127.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478509.1;locus_tag=LDO50_RS03890;product=NfeD family protein;protein_id=WP_011885127.1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 4513 6912 . - . ID=gene-LDO50_RS03895;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=LDO50_RS03895;old_locus_tag=BVI1335_1200008 NZ_CAJZAO010000025.1 Protein Homology CDS 4513 6912 . - 0 ID=cds-WP_034195315.1;Parent=gene-LDO50_RS03895;Dbxref=GenBank:WP_034195315.1;Name=WP_034195315.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026079.1;locus_tag=LDO50_RS03895;product=phosphoenolpyruvate synthase;protein_id=WP_034195315.1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 7289 8104 . + . ID=gene-LDO50_RS03900;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=LDO50_RS03900;old_locus_tag=BVI1335_1200009 NZ_CAJZAO010000025.1 Protein Homology CDS 7289 8104 . + 0 ID=cds-WP_011885129.1;Parent=gene-LDO50_RS03900;Dbxref=GenBank:WP_011885129.1;Name=WP_011885129.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010104596.1;locus_tag=LDO50_RS03900;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_011885129.1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 8216 8998 . - . ID=gene-LDO50_RS03905;Name=LDO50_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03905;old_locus_tag=BVI1335_1200010 NZ_CAJZAO010000025.1 Protein Homology CDS 8216 8998 . - 0 ID=cds-WP_059549489.1;Parent=gene-LDO50_RS03905;Dbxref=GenBank:WP_059549489.1;Name=WP_059549489.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407699.1;locus_tag=LDO50_RS03905;product=TrmH family RNA methyltransferase;protein_id=WP_059549489.1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 8995 9645 . - . ID=gene-LDO50_RS03910;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=LDO50_RS03910;old_locus_tag=BVI1335_1200011 NZ_CAJZAO010000025.1 Protein Homology CDS 8995 9645 . - 0 ID=cds-WP_011885131.1;Parent=gene-LDO50_RS03910;Dbxref=GenBank:WP_011885131.1;Name=WP_011885131.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885131.1;locus_tag=LDO50_RS03910;product=ribonuclease HII;protein_id=WP_011885131.1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 9642 10811 . - . ID=gene-LDO50_RS03915;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=LDO50_RS03915;old_locus_tag=BVI1335_1200012 NZ_CAJZAO010000025.1 Protein Homology CDS 9642 10811 . - 0 ID=cds-WP_011885132.1;Parent=gene-LDO50_RS03915;Dbxref=GenBank:WP_011885132.1;Name=WP_011885132.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213142.1;locus_tag=LDO50_RS03915;product=lipid-A-disaccharide synthase;protein_id=WP_011885132.1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 10815 11603 . - . ID=gene-LDO50_RS03920;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=LDO50_RS03920;old_locus_tag=BVI1335_1200013 NZ_CAJZAO010000025.1 Protein Homology CDS 10815 11603 . - 0 ID=cds-WP_046426975.1;Parent=gene-LDO50_RS03920;Dbxref=GenBank:WP_046426975.1;Name=WP_046426975.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193051.1;locus_tag=LDO50_RS03920;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_046426975.1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 11671 12138 . - . ID=gene-LDO50_RS03925;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=LDO50_RS03925;old_locus_tag=BVI1335_1200014 NZ_CAJZAO010000025.1 Protein Homology CDS 11671 12138 . - 0 ID=cds-WP_006495559.1;Parent=gene-LDO50_RS03925;Dbxref=GenBank:WP_006495559.1;Name=WP_006495559.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192266.1;locus_tag=LDO50_RS03925;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_006495559.1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 12265 13389 . - . ID=gene-LDO50_RS03930;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=LDO50_RS03930;old_locus_tag=BVI1335_1200015 NZ_CAJZAO010000025.1 Protein Homology CDS 12265 13389 . - 0 ID=cds-WP_224019430.1;Parent=gene-LDO50_RS03930;Dbxref=GenBank:WP_224019430.1;Name=WP_224019430.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328756.1;locus_tag=LDO50_RS03930;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_224019430.1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 13406 13933 . - . ID=gene-LDO50_RS03935;Name=LDO50_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03935;old_locus_tag=BVI1335_1200016 NZ_CAJZAO010000025.1 Protein Homology CDS 13406 13933 . - 0 ID=cds-WP_011885135.1;Parent=gene-LDO50_RS03935;Dbxref=GenBank:WP_011885135.1;Name=WP_011885135.1;Ontology_term=GO:0051082,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=unfolded protein binding|0051082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483811.1;locus_tag=LDO50_RS03935;product=OmpH family outer membrane protein;protein_id=WP_011885135.1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 13968 16274 . - . ID=gene-LDO50_RS03940;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=LDO50_RS03940;old_locus_tag=BVI1335_1200017 NZ_CAJZAO010000025.1 Protein Homology CDS 13968 16274 . - 0 ID=cds-WP_011885136.1;Parent=gene-LDO50_RS03940;Dbxref=GenBank:WP_011885136.1;Name=WP_011885136.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758559.1;locus_tag=LDO50_RS03940;product=outer membrane protein assembly factor BamA;protein_id=WP_011885136.1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 16339 17712 . - . ID=gene-LDO50_RS03945;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=LDO50_RS03945;old_locus_tag=BVI1335_1200018 NZ_CAJZAO010000025.1 Protein Homology CDS 16339 17712 . - 0 ID=cds-WP_014723215.1;Parent=gene-LDO50_RS03945;Dbxref=GenBank:WP_014723215.1;Name=WP_014723215.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521191.1;locus_tag=LDO50_RS03945;product=RIP metalloprotease RseP;protein_id=WP_014723215.1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 17724 18920 . - . ID=gene-LDO50_RS03950;Name=LDO50_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03950;old_locus_tag=BVI1335_1200019 NZ_CAJZAO010000025.1 Protein Homology CDS 17724 18920 . - 0 ID=cds-WP_011885138.1;Parent=gene-LDO50_RS03950;Dbxref=GenBank:WP_011885138.1;Name=WP_011885138.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478497.1;locus_tag=LDO50_RS03950;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_011885138.1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 18936 19757 . - . ID=gene-LDO50_RS03955;Name=LDO50_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03955;old_locus_tag=BVI1335_1200020 NZ_CAJZAO010000025.1 Protein Homology CDS 18936 19757 . - 0 ID=cds-WP_014723217.1;Parent=gene-LDO50_RS03955;Dbxref=GenBank:WP_014723217.1;Name=WP_014723217.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896737.1;locus_tag=LDO50_RS03955;product=phosphatidate cytidylyltransferase;protein_id=WP_014723217.1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 19751 20533 . - . ID=gene-LDO50_RS03960;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=LDO50_RS03960;old_locus_tag=BVI1335_1200021 NZ_CAJZAO010000025.1 Protein Homology CDS 19751 20533 . - 0 ID=cds-WP_011885140.1;Parent=gene-LDO50_RS03960;Dbxref=GenBank:WP_011885140.1;Name=WP_011885140.1;Ontology_term=GO:0009252,GO:0005737;gbkey=CDS;gene=uppS;go_component=cytoplasm|0005737||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092065.1;locus_tag=LDO50_RS03960;product=polyprenyl diphosphate synthase;protein_id=WP_011885140.1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 20583 21143 . - . ID=gene-LDO50_RS03965;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=LDO50_RS03965;old_locus_tag=BVI1335_1200022 NZ_CAJZAO010000025.1 Protein Homology CDS 20583 21143 . - 0 ID=cds-WP_011885141.1;Parent=gene-LDO50_RS03965;Dbxref=GenBank:WP_011885141.1;Name=WP_011885141.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192143.1;locus_tag=LDO50_RS03965;product=ribosome recycling factor;protein_id=WP_011885141.1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 21246 21959 . - . ID=gene-LDO50_RS03970;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=LDO50_RS03970;old_locus_tag=BVI1335_1200023 NZ_CAJZAO010000025.1 Protein Homology CDS 21246 21959 . - 0 ID=cds-WP_011885142.1;Parent=gene-LDO50_RS03970;Dbxref=GenBank:WP_011885142.1;Name=WP_011885142.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010104618.1;locus_tag=LDO50_RS03970;product=UMP kinase;protein_id=WP_011885142.1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 22116 22997 . - . ID=gene-LDO50_RS03975;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=LDO50_RS03975;old_locus_tag=BVI1335_1200024 NZ_CAJZAO010000025.1 Protein Homology CDS 22116 22997 . - 0 ID=cds-WP_011885143.1;Parent=gene-LDO50_RS03975;Dbxref=GenBank:WP_011885143.1;Name=WP_011885143.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352460.1;locus_tag=LDO50_RS03975;product=translation elongation factor Ts;protein_id=WP_011885143.1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 23160 23900 . - . ID=gene-LDO50_RS03980;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=LDO50_RS03980;old_locus_tag=BVI1335_1200025 NZ_CAJZAO010000025.1 Protein Homology CDS 23160 23900 . - 0 ID=cds-WP_011885144.1;Parent=gene-LDO50_RS03980;Dbxref=GenBank:WP_011885144.1;Name=WP_011885144.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885144.1;locus_tag=LDO50_RS03980;product=30S ribosomal protein S2;protein_id=WP_011885144.1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 24278 25093 . + . ID=gene-LDO50_RS03985;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=LDO50_RS03985;old_locus_tag=BVI1335_1200026 NZ_CAJZAO010000025.1 Protein Homology CDS 24278 25093 . + 0 ID=cds-WP_011885146.1;Parent=gene-LDO50_RS03985;Dbxref=GenBank:WP_011885146.1;Name=WP_011885146.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478487.1;locus_tag=LDO50_RS03985;product=type I methionyl aminopeptidase;protein_id=WP_011885146.1;transl_table=11 NZ_CAJZAO010000025.1 RefSeq gene 25145 27724 . + . ID=gene-LDO50_RS03990;Name=LDO50_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03990;old_locus_tag=BVI1335_1200027 NZ_CAJZAO010000025.1 Protein Homology CDS 25145 27724 . + 0 ID=cds-WP_059463351.1;Parent=gene-LDO50_RS03990;Dbxref=GenBank:WP_059463351.1;Name=WP_059463351.1;Ontology_term=GO:0008152,GO:0008773;gbkey=CDS;go_function=[protein-PII] uridylyltransferase activity|0008773||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885147.1;locus_tag=LDO50_RS03990;product=[protein-PII] uridylyltransferase;protein_id=WP_059463351.1;transl_table=11 ##sequence-region NZ_CAJZAO010000026.1 1 24629 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000026.1 RefSeq region 1 24629 . + . ID=NZ_CAJZAO010000026.1:1..24629;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_121 NZ_CAJZAO010000026.1 RefSeq gene 1 222 . + . ID=gene-LDO50_RS03995;Name=LDO50_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS03995;old_locus_tag=BVI1335_1210001;partial=true;start_range=.,1 NZ_CAJZAO010000026.1 GeneMarkS-2+ CDS 1 222 . + 0 ID=cds-WP_224019431.1;Parent=gene-LDO50_RS03995;Dbxref=GenBank:WP_224019431.1;Name=WP_224019431.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS03995;partial=true;product=hypothetical protein;protein_id=WP_224019431.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000026.1 RefSeq gene 478 1029 . - . ID=gene-LDO50_RS04000;Name=LDO50_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04000;old_locus_tag=BVI1335_1210002 NZ_CAJZAO010000026.1 Protein Homology CDS 478 1029 . - 0 ID=cds-WP_059475496.1;Parent=gene-LDO50_RS04000;Dbxref=GenBank:WP_059475496.1;Name=WP_059475496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216384.1;locus_tag=LDO50_RS04000;product=phosphonate degradation HD-domain oxygenase;protein_id=WP_059475496.1;transl_table=11 NZ_CAJZAO010000026.1 RefSeq gene 1034 2488 . - . ID=gene-LDO50_RS04005;Name=phnY;gbkey=Gene;gene=phnY;gene_biotype=protein_coding;locus_tag=LDO50_RS04005;old_locus_tag=BVI1335_1210003 NZ_CAJZAO010000026.1 Protein Homology CDS 1034 2488 . - 0 ID=cds-WP_059475495.1;Parent=gene-LDO50_RS04005;Dbxref=GenBank:WP_059475495.1;Name=WP_059475495.1;gbkey=CDS;gene=phnY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406897.1;locus_tag=LDO50_RS04005;product=phosphonoacetaldehyde dehydrogenase;protein_id=WP_059475495.1;transl_table=11 NZ_CAJZAO010000026.1 RefSeq gene 2485 3795 . - . ID=gene-LDO50_RS04010;Name=phnA;gbkey=Gene;gene=phnA;gene_biotype=protein_coding;locus_tag=LDO50_RS04010;old_locus_tag=BVI1335_1210004 NZ_CAJZAO010000026.1 Protein Homology CDS 2485 3795 . - 0 ID=cds-WP_045577676.1;Parent=gene-LDO50_RS04010;Dbxref=GenBank:WP_045577676.1;Name=WP_045577676.1;Ontology_term=GO:0019636,GO:0047400;gbkey=CDS;gene=phnA;go_function=phosphonoacetate hydrolase activity|0047400||IEA;go_process=phosphonoacetate metabolic process|0019636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546901.1;locus_tag=LDO50_RS04010;product=phosphonoacetate hydrolase;protein_id=WP_045577676.1;transl_table=11 NZ_CAJZAO010000026.1 RefSeq gene 3792 4652 . - . ID=gene-LDO50_RS04015;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=LDO50_RS04015;old_locus_tag=BVI1335_1210005 NZ_CAJZAO010000026.1 Protein Homology CDS 3792 4652 . - 0 ID=cds-WP_059460677.1;Parent=gene-LDO50_RS04015;Dbxref=GenBank:WP_059460677.1;Name=WP_059460677.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnV;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756345.1;locus_tag=LDO50_RS04015;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WP_059460677.1;transl_table=11 NZ_CAJZAO010000026.1 RefSeq gene 4642 5562 . - . ID=gene-LDO50_RS04020;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=protein_coding;locus_tag=LDO50_RS04020;old_locus_tag=BVI1335_1210006 NZ_CAJZAO010000026.1 Protein Homology CDS 4642 5562 . - 0 ID=cds-WP_046426008.1;Parent=gene-LDO50_RS04020;Dbxref=GenBank:WP_046426008.1;Name=WP_046426008.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnU;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414767.1;locus_tag=LDO50_RS04020;product=2-aminoethylphosphonate ABC transporter permease subunit;protein_id=WP_046426008.1;transl_table=11 NZ_CAJZAO010000026.1 RefSeq gene 5540 6643 . - . ID=gene-LDO50_RS04025;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=LDO50_RS04025;old_locus_tag=BVI1335_1210007 NZ_CAJZAO010000026.1 Protein Homology CDS 5540 6643 . - 0 ID=cds-WP_011880895.1;Parent=gene-LDO50_RS04025;Dbxref=GenBank:WP_011880895.1;Name=WP_011880895.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014901035.1;locus_tag=LDO50_RS04025;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WP_011880895.1;transl_table=11 NZ_CAJZAO010000026.1 RefSeq gene 6678 7769 . - . ID=gene-LDO50_RS04030;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=LDO50_RS04030;old_locus_tag=BVI1335_1210008 NZ_CAJZAO010000026.1 Protein Homology CDS 6678 7769 . - 0 ID=cds-WP_011880896.1;Parent=gene-LDO50_RS04030;Dbxref=GenBank:WP_011880896.1;Name=WP_011880896.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=phnS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406893.1;locus_tag=LDO50_RS04030;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WP_011880896.1;transl_table=11 NZ_CAJZAO010000026.1 RefSeq gene 7823 7987 . - . ID=gene-LDO50_RS04035;Name=LDO50_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04035 NZ_CAJZAO010000026.1 GeneMarkS-2+ CDS 7823 7987 . - 0 ID=cds-WP_155624718.1;Parent=gene-LDO50_RS04035;Dbxref=GenBank:WP_155624718.1;Name=WP_155624718.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS04035;product=hypothetical protein;protein_id=WP_155624718.1;transl_table=11 NZ_CAJZAO010000026.1 RefSeq gene 8024 9133 . + . ID=gene-LDO50_RS04040;Name=LDO50_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04040;old_locus_tag=BVI1335_1210009 NZ_CAJZAO010000026.1 Protein Homology CDS 8024 9133 . + 0 ID=cds-WP_045577672.1;Parent=gene-LDO50_RS04040;Dbxref=GenBank:WP_045577672.1;Name=WP_045577672.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546896.1;locus_tag=LDO50_RS04040;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_045577672.1;transl_table=11 NZ_CAJZAO010000026.1 RefSeq gene 9223 10557 . - . ID=gene-LDO50_RS04045;Name=LDO50_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04045;old_locus_tag=BVI1335_1210010 NZ_CAJZAO010000026.1 Protein Homology CDS 9223 10557 . - 0 ID=cds-WP_011880898.1;Parent=gene-LDO50_RS04045;Dbxref=GenBank:WP_011880898.1;Name=WP_011880898.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480491.1;locus_tag=LDO50_RS04045;product=MFS transporter;protein_id=WP_011880898.1;transl_table=11 NZ_CAJZAO010000026.1 RefSeq gene 10601 11455 . - . ID=gene-LDO50_RS04050;Name=LDO50_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04050;old_locus_tag=BVI1335_1210011 NZ_CAJZAO010000026.1 Protein Homology CDS 10601 11455 . - 0 ID=cds-WP_014724070.1;Parent=gene-LDO50_RS04050;Dbxref=GenBank:WP_014724070.1;Name=WP_014724070.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602966.1;locus_tag=LDO50_RS04050;product=shikimate dehydrogenase;protein_id=WP_014724070.1;transl_table=11 NZ_CAJZAO010000026.1 RefSeq gene 11452 11907 . - . ID=gene-LDO50_RS04055;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=LDO50_RS04055;old_locus_tag=BVI1335_1210012 NZ_CAJZAO010000026.1 Protein Homology CDS 11452 11907 . - 0 ID=cds-WP_011880900.1;Parent=gene-LDO50_RS04055;Dbxref=GenBank:WP_011880900.1;Name=WP_011880900.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216377.1;locus_tag=LDO50_RS04055;product=type II 3-dehydroquinate dehydratase;protein_id=WP_011880900.1;transl_table=11 NZ_CAJZAO010000026.1 RefSeq gene 12161 14053 . + . ID=gene-LDO50_RS04060;Name=LDO50_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04060;old_locus_tag=BVI1335_1210013 NZ_CAJZAO010000026.1 Protein Homology CDS 12161 14053 . + 0 ID=cds-WP_046426016.1;Parent=gene-LDO50_RS04060;Dbxref=GenBank:WP_046426016.1;Name=WP_046426016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198724.1;locus_tag=LDO50_RS04060;product=bifunctional sugar phosphate isomerase/epimerase/4-hydroxyphenylpyruvate dioxygenase family protein;protein_id=WP_046426016.1;transl_table=11 NZ_CAJZAO010000026.1 RefSeq gene 14359 14622 . + . ID=gene-LDO50_RS04065;Name=LDO50_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04065;old_locus_tag=BVI1335_1210014 NZ_CAJZAO010000026.1 Protein Homology CDS 14359 14622 . + 0 ID=cds-WP_011880902.1;Parent=gene-LDO50_RS04065;Dbxref=GenBank:WP_011880902.1;Name=WP_011880902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756354.1;locus_tag=LDO50_RS04065;product=hypothetical protein;protein_id=WP_011880902.1;transl_table=11 NZ_CAJZAO010000026.1 RefSeq gene 14696 15490 . - . ID=gene-LDO50_RS04070;Name=LDO50_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04070;old_locus_tag=BVI1335_1210015 NZ_CAJZAO010000026.1 Protein Homology CDS 14696 15490 . - 0 ID=cds-WP_045577671.1;Parent=gene-LDO50_RS04070;Dbxref=GenBank:WP_045577671.1;Name=WP_045577671.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880903.1;locus_tag=LDO50_RS04070;product=AraC family transcriptional regulator;protein_id=WP_045577671.1;transl_table=11 NZ_CAJZAO010000026.1 RefSeq gene 16298 17434 . + . ID=gene-LDO50_RS04075;Name=LDO50_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04075;old_locus_tag=BVI1335_1210018 NZ_CAJZAO010000026.1 Protein Homology CDS 16298 17434 . + 0 ID=cds-WP_011880904.1;Parent=gene-LDO50_RS04075;Dbxref=GenBank:WP_011880904.1;Name=WP_011880904.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406882.1;locus_tag=LDO50_RS04075;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_011880904.1;transl_table=11 NZ_CAJZAO010000026.1 RefSeq gene 17768 19078 . + . ID=gene-LDO50_RS04080;Name=LDO50_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04080;old_locus_tag=BVI1335_1210020 NZ_CAJZAO010000026.1 Protein Homology CDS 17768 19078 . + 0 ID=cds-WP_059558592.1;Parent=gene-LDO50_RS04080;Dbxref=GenBank:WP_059558592.1;Name=WP_059558592.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494264.1;locus_tag=LDO50_RS04080;product=MFS transporter;protein_id=WP_059558592.1;transl_table=11 NZ_CAJZAO010000026.1 RefSeq gene 19201 19638 . - . ID=gene-LDO50_RS04085;Name=LDO50_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04085;old_locus_tag=BVI1335_1210021 NZ_CAJZAO010000026.1 Protein Homology CDS 19201 19638 . - 0 ID=cds-WP_011880906.1;Parent=gene-LDO50_RS04085;Dbxref=GenBank:WP_011880906.1;Name=WP_011880906.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604064.1;locus_tag=LDO50_RS04085;product=DoxX family protein;protein_id=WP_011880906.1;transl_table=11 NZ_CAJZAO010000026.1 RefSeq gene 19818 20273 . - . ID=gene-LDO50_RS04090;Name=LDO50_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04090;old_locus_tag=BVI1335_1210022 NZ_CAJZAO010000026.1 Protein Homology CDS 19818 20273 . - 0 ID=cds-WP_011880907.1;Parent=gene-LDO50_RS04090;Dbxref=GenBank:WP_011880907.1;Name=WP_011880907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353949.1;locus_tag=LDO50_RS04090;product=RbsD/FucU family protein;protein_id=WP_011880907.1;transl_table=11 NZ_CAJZAO010000026.1 RefSeq gene 20441 21994 . - . ID=gene-LDO50_RS04095;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=LDO50_RS04095;old_locus_tag=BVI1335_1210023 NZ_CAJZAO010000026.1 Protein Homology CDS 20441 21994 . - 0 ID=cds-WP_011880908.1;Parent=gene-LDO50_RS04095;Dbxref=GenBank:WP_011880908.1;Name=WP_011880908.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756361.1;locus_tag=LDO50_RS04095;product=galactarate dehydratase;protein_id=WP_011880908.1;transl_table=11 NZ_CAJZAO010000026.1 RefSeq gene 22225 23139 . + . ID=gene-LDO50_RS04100;Name=kdgD;gbkey=Gene;gene=kdgD;gene_biotype=protein_coding;locus_tag=LDO50_RS04100;old_locus_tag=BVI1335_1210024 NZ_CAJZAO010000026.1 Protein Homology CDS 22225 23139 . + 0 ID=cds-WP_011880909.1;Parent=gene-LDO50_RS04100;Dbxref=GenBank:WP_011880909.1;Name=WP_011880909.1;Ontology_term=GO:0016052,GO:0047448;gbkey=CDS;gene=kdgD;go_function=5-dehydro-4-deoxyglucarate dehydratase activity|0047448||IEA;go_process=carbohydrate catabolic process|0016052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094246.1;locus_tag=LDO50_RS04100;product=5-dehydro-4-deoxyglucarate dehydratase;protein_id=WP_011880909.1;transl_table=11 NZ_CAJZAO010000026.1 RefSeq gene 23443 24480 . - . ID=gene-LDO50_RS04105;Name=LDO50_RS04105;end_range=24480,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04105;old_locus_tag=BVI1335_1210025;partial=true NZ_CAJZAO010000026.1 Protein Homology CDS 23443 24480 . - 0 ID=cds-WP_443797710.1;Parent=gene-LDO50_RS04105;Dbxref=GenBank:WP_443797710.1;Name=WP_443797710.1;Ontology_term=GO:0016491;end_range=24480,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406866.1;locus_tag=LDO50_RS04105;partial=true;product=aldehyde dehydrogenase family protein;protein_id=WP_443797710.1;transl_table=11 ##sequence-region NZ_CAJZAO010000027.1 1 59204 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000027.1 RefSeq region 1 59204 . + . ID=NZ_CAJZAO010000027.1:1..59204;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_122 NZ_CAJZAO010000027.1 RefSeq gene 1 466 . - . ID=gene-LDO50_RS04110;Name=LDO50_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04110;partial=true;start_range=.,1 NZ_CAJZAO010000027.1 Protein Homology CDS 1 466 . - 0 ID=cds-WP_224019432.1;Parent=gene-LDO50_RS04110;Dbxref=GenBank:WP_224019432.1;Name=WP_224019432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883942.1;locus_tag=LDO50_RS04110;partial=true;product=SAM-dependent methyltransferase;protein_id=WP_224019432.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 463 1092 . - . ID=gene-LDO50_RS04115;Name=LDO50_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04115;old_locus_tag=BVI1335_1220002 NZ_CAJZAO010000027.1 Protein Homology CDS 463 1092 . - 0 ID=cds-WP_034194220.1;Parent=gene-LDO50_RS04115;Dbxref=GenBank:WP_034194220.1;Name=WP_034194220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489696.1;locus_tag=LDO50_RS04115;product=Maf-like protein;protein_id=WP_034194220.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 1353 1988 . + . ID=gene-LDO50_RS04120;Name=LDO50_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04120;old_locus_tag=BVI1335_1220004 NZ_CAJZAO010000027.1 Protein Homology CDS 1353 1988 . + 0 ID=cds-WP_011883952.1;Parent=gene-LDO50_RS04120;Dbxref=GenBank:WP_011883952.1;Name=WP_011883952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889985.1;locus_tag=LDO50_RS04120;product=DUF177 domain-containing protein;protein_id=WP_011883952.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 2087 2266 . + . ID=gene-LDO50_RS04125;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=LDO50_RS04125;old_locus_tag=BVI1335_1220005 NZ_CAJZAO010000027.1 Protein Homology CDS 2087 2266 . + 0 ID=cds-WP_006051932.1;Parent=gene-LDO50_RS04125;Dbxref=GenBank:WP_006051932.1;Name=WP_006051932.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889986.1;locus_tag=LDO50_RS04125;product=50S ribosomal protein L32;protein_id=WP_006051932.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 2396 3502 . + . ID=gene-LDO50_RS04130;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=LDO50_RS04130;old_locus_tag=BVI1335_1220006 NZ_CAJZAO010000027.1 Protein Homology CDS 2396 3502 . + 0 ID=cds-WP_011883953.1;Parent=gene-LDO50_RS04130;Dbxref=GenBank:WP_011883953.1;Name=WP_011883953.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764798.1;locus_tag=LDO50_RS04130;product=phosphate acyltransferase PlsX;protein_id=WP_011883953.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 3503 4492 . + . ID=gene-LDO50_RS04135;Name=LDO50_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04135;old_locus_tag=BVI1335_1220007 NZ_CAJZAO010000027.1 Protein Homology CDS 3503 4492 . + 0 ID=cds-WP_011883955.1;Parent=gene-LDO50_RS04135;Dbxref=GenBank:WP_011883955.1;Name=WP_011883955.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010105339.1;locus_tag=LDO50_RS04135;product=beta-ketoacyl-ACP synthase III;protein_id=WP_011883955.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 4578 5510 . + . ID=gene-LDO50_RS04140;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=LDO50_RS04140;old_locus_tag=BVI1335_1220008 NZ_CAJZAO010000027.1 Protein Homology CDS 4578 5510 . + 0 ID=cds-WP_011883957.1;Parent=gene-LDO50_RS04140;Dbxref=GenBank:WP_011883957.1;Name=WP_011883957.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025800.1;locus_tag=LDO50_RS04140;product=ACP S-malonyltransferase;protein_id=WP_011883957.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 5547 6296 . + . ID=gene-LDO50_RS04145;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=LDO50_RS04145;old_locus_tag=BVI1335_1220009 NZ_CAJZAO010000027.1 Protein Homology CDS 5547 6296 . + 0 ID=cds-WP_011883958.1;Parent=gene-LDO50_RS04145;Dbxref=GenBank:WP_011883958.1;Name=WP_011883958.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192016.1;locus_tag=LDO50_RS04145;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_011883958.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 6441 6680 . + . ID=gene-LDO50_RS04150;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=LDO50_RS04150;old_locus_tag=BVI1335_1220010 NZ_CAJZAO010000027.1 Protein Homology CDS 6441 6680 . + 0 ID=cds-WP_004197638.1;Parent=gene-LDO50_RS04150;Dbxref=GenBank:WP_004197638.1;Name=WP_004197638.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735022.1;locus_tag=LDO50_RS04150;product=acyl carrier protein;protein_id=WP_004197638.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 6845 8077 . + . ID=gene-LDO50_RS04155;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=LDO50_RS04155;old_locus_tag=BVI1335_1220011 NZ_CAJZAO010000027.1 Protein Homology CDS 6845 8077 . + 0 ID=cds-WP_224019433.1;Parent=gene-LDO50_RS04155;Dbxref=GenBank:WP_224019433.1;Name=WP_224019433.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752488.1;locus_tag=LDO50_RS04155;product=beta-ketoacyl-ACP synthase II;protein_id=WP_224019433.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 8089 8553 . + . ID=gene-LDO50_RS04160;Name=LDO50_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04160;old_locus_tag=BVI1335_1220012 NZ_CAJZAO010000027.1 Protein Homology CDS 8089 8553 . + 0 ID=cds-WP_011883960.1;Parent=gene-LDO50_RS04160;Dbxref=GenBank:WP_011883960.1;Name=WP_011883960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213793.1;locus_tag=LDO50_RS04160;product=hypothetical protein;protein_id=WP_011883960.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 8644 9243 . + . ID=gene-LDO50_RS04165;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=LDO50_RS04165;old_locus_tag=BVI1335_1220013 NZ_CAJZAO010000027.1 Protein Homology CDS 8644 9243 . + 0 ID=cds-WP_011883961.1;Parent=gene-LDO50_RS04165;Dbxref=GenBank:WP_011883961.1;Name=WP_011883961.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883961.1;locus_tag=LDO50_RS04165;product=RNA polymerase sigma factor RpoE;protein_id=WP_011883961.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 9332 9949 . + . ID=gene-LDO50_RS04170;Name=LDO50_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04170;old_locus_tag=BVI1335_1220014 NZ_CAJZAO010000027.1 Protein Homology CDS 9332 9949 . + 0 ID=cds-WP_011883962.1;Parent=gene-LDO50_RS04170;Dbxref=GenBank:WP_011883962.1;Name=WP_011883962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415543.1;locus_tag=LDO50_RS04170;product=sigma-E factor negative regulatory protein;protein_id=WP_011883962.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 9955 11007 . + . ID=gene-LDO50_RS04175;Name=LDO50_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04175;old_locus_tag=BVI1335_1220015 NZ_CAJZAO010000027.1 Protein Homology CDS 9955 11007 . + 0 ID=cds-WP_011883963.1;Parent=gene-LDO50_RS04175;Dbxref=GenBank:WP_011883963.1;Name=WP_011883963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192760.1;locus_tag=LDO50_RS04175;product=MucB/RseB C-terminal domain-containing protein;protein_id=WP_011883963.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 11024 12517 . + . ID=gene-LDO50_RS04180;Name=LDO50_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04180;old_locus_tag=BVI1335_1220016 NZ_CAJZAO010000027.1 Protein Homology CDS 11024 12517 . + 0 ID=cds-WP_014722722.1;Parent=gene-LDO50_RS04180;Dbxref=GenBank:WP_014722722.1;Name=WP_014722722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363407.1;locus_tag=LDO50_RS04180;product=DegQ family serine endoprotease;protein_id=WP_014722722.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 12529 12765 . + . ID=gene-LDO50_RS04185;Name=LDO50_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04185;old_locus_tag=BVI1335_1220017 NZ_CAJZAO010000027.1 Protein Homology CDS 12529 12765 . + 0 ID=cds-WP_059568582.1;Parent=gene-LDO50_RS04185;Dbxref=GenBank:WP_059568582.1;Name=WP_059568582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476497.1;locus_tag=LDO50_RS04185;product=glutaredoxin family protein;protein_id=WP_059568582.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 12949 14742 . + . ID=gene-LDO50_RS04190;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=LDO50_RS04190;old_locus_tag=BVI1335_1220019 NZ_CAJZAO010000027.1 Protein Homology CDS 12949 14742 . + 0 ID=cds-WP_011883966.1;Parent=gene-LDO50_RS04190;Dbxref=GenBank:WP_011883966.1;Name=WP_011883966.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897649.1;locus_tag=LDO50_RS04190;product=translation elongation factor 4;protein_id=WP_011883966.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 14759 15652 . + . ID=gene-LDO50_RS04195;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=LDO50_RS04195;old_locus_tag=BVI1335_1220020 NZ_CAJZAO010000027.1 Protein Homology CDS 14759 15652 . + 0 ID=cds-WP_011883967.1;Parent=gene-LDO50_RS04195;Dbxref=GenBank:WP_011883967.1;Name=WP_011883967.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890017.1;locus_tag=LDO50_RS04195;product=signal peptidase I;protein_id=WP_011883967.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 15806 17056 . + . ID=gene-LDO50_RS04200;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=LDO50_RS04200;old_locus_tag=BVI1335_1220021 NZ_CAJZAO010000027.1 Protein Homology CDS 15806 17056 . + 0 ID=cds-WP_212163423.1;Parent=gene-LDO50_RS04200;Dbxref=GenBank:WP_212163423.1;Name=WP_212163423.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408140.1;locus_tag=LDO50_RS04200;product=ribonuclease III;protein_id=WP_212163423.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 17117 18016 . + . ID=gene-LDO50_RS04205;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=LDO50_RS04205;old_locus_tag=BVI1335_1220022 NZ_CAJZAO010000027.1 Protein Homology CDS 17117 18016 . + 0 ID=cds-WP_041493796.1;Parent=gene-LDO50_RS04205;Dbxref=GenBank:WP_041493796.1;Name=WP_041493796.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009913163.1;locus_tag=LDO50_RS04205;product=GTPase Era;protein_id=WP_041493796.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 18003 18842 . + . ID=gene-LDO50_RS04210;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=LDO50_RS04210;old_locus_tag=BVI1335_1220023 NZ_CAJZAO010000027.1 Protein Homology CDS 18003 18842 . + 0 ID=cds-WP_011883970.1;Parent=gene-LDO50_RS04210;Dbxref=GenBank:WP_011883970.1;Name=WP_011883970.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351416.1;locus_tag=LDO50_RS04210;product=DNA repair protein RecO;protein_id=WP_011883970.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 18839 19615 . + . ID=gene-LDO50_RS04215;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=LDO50_RS04215;old_locus_tag=BVI1335_1220024 NZ_CAJZAO010000027.1 Protein Homology CDS 18839 19615 . + 0 ID=cds-WP_224019434.1;Parent=gene-LDO50_RS04215;Dbxref=GenBank:WP_224019434.1;Name=WP_224019434.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762396.1;locus_tag=LDO50_RS04215;product=pyridoxine 5'-phosphate synthase;protein_id=WP_224019434.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 19685 20122 . + . ID=gene-LDO50_RS04220;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=LDO50_RS04220;old_locus_tag=BVI1335_1220025 NZ_CAJZAO010000027.1 Protein Homology CDS 19685 20122 . + 0 ID=cds-WP_045579320.1;Parent=gene-LDO50_RS04220;Dbxref=GenBank:WP_045579320.1;Name=WP_045579320.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762395.1;locus_tag=LDO50_RS04220;product=holo-ACP synthase;protein_id=WP_045579320.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 20139 21167 . + . ID=gene-LDO50_RS04225;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=LDO50_RS04225;old_locus_tag=BVI1335_1220026 NZ_CAJZAO010000027.1 Protein Homology CDS 20139 21167 . + 0 ID=cds-WP_059990782.1;Parent=gene-LDO50_RS04225;Dbxref=GenBank:WP_059990782.1;Name=WP_059990782.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897642.1;locus_tag=LDO50_RS04225;product=beta-N-acetylhexosaminidase;protein_id=WP_059990782.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 21319 22704 . - . ID=gene-LDO50_RS04230;Name=LDO50_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04230;old_locus_tag=BVI1335_1220027 NZ_CAJZAO010000027.1 Protein Homology CDS 21319 22704 . - 0 ID=cds-WP_014722729.1;Parent=gene-LDO50_RS04230;Dbxref=GenBank:WP_014722729.1;Name=WP_014722729.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677,GO:0005524;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401253.1;locus_tag=LDO50_RS04230;product=sigma-54-dependent transcriptional regulator;protein_id=WP_014722729.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 22976 23533 . - . ID=gene-LDO50_RS04235;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=LDO50_RS04235;old_locus_tag=BVI1335_1220028 NZ_CAJZAO010000027.1 Protein Homology CDS 22976 23533 . - 0 ID=cds-WP_011883975.1;Parent=gene-LDO50_RS04235;Dbxref=GenBank:WP_011883975.1;Name=WP_011883975.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883975.1;locus_tag=LDO50_RS04235;product=elongation factor P;protein_id=WP_011883975.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 23671 24882 . - . ID=gene-LDO50_RS04240;Name=earP;gbkey=Gene;gene=earP;gene_biotype=protein_coding;locus_tag=LDO50_RS04240;old_locus_tag=BVI1335_1220029 NZ_CAJZAO010000027.1 Protein Homology CDS 23671 24882 . - 0 ID=cds-WP_014722730.1;Parent=gene-LDO50_RS04240;Dbxref=GenBank:WP_014722730.1;Name=WP_014722730.1;Ontology_term=GO:0106361;gbkey=CDS;gene=earP;go_function=protein-arginine rhamnosyltransferase activity|0106361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751870.1;locus_tag=LDO50_RS04240;product=elongation factor P maturation arginine rhamnosyltransferase EarP;protein_id=WP_014722730.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 24958 27015 . + . ID=gene-LDO50_RS04245;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=LDO50_RS04245;old_locus_tag=BVI1335_1220031 NZ_CAJZAO010000027.1 Protein Homology CDS 24958 27015 . + 0 ID=cds-WP_059462941.1;Parent=gene-LDO50_RS04245;Dbxref=GenBank:WP_059462941.1;Name=WP_059462941.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656361.1;locus_tag=LDO50_RS04245;product=excinuclease ABC subunit UvrC;protein_id=WP_059462941.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 27127 27714 . + . ID=gene-LDO50_RS04250;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=LDO50_RS04250;old_locus_tag=BVI1335_1220032 NZ_CAJZAO010000027.1 Protein Homology CDS 27127 27714 . + 0 ID=cds-WP_011883978.1;Parent=gene-LDO50_RS04250;Dbxref=GenBank:WP_011883978.1;Name=WP_011883978.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544951.1;locus_tag=LDO50_RS04250;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_011883978.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 28017 28090 . + . ID=gene-LDO50_RS04255;Name=LDO50_RS04255;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS04255;old_locus_tag=BVI1335_TRNA13 NZ_CAJZAO010000027.1 tRNAscan-SE tRNA 28017 28090 . + . ID=rna-LDO50_RS04255;Parent=gene-LDO50_RS04255;anticodon=(pos:28049..28051);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS04255;product=tRNA-Cys NZ_CAJZAO010000027.1 tRNAscan-SE exon 28017 28090 . + . ID=exon-LDO50_RS04255-1;Parent=rna-LDO50_RS04255;anticodon=(pos:28049..28051);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS04255;product=tRNA-Cys NZ_CAJZAO010000027.1 RefSeq gene 28265 28546 . + . ID=gene-LDO50_RS04260;Name=LDO50_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04260;old_locus_tag=BVI1335_1220033 NZ_CAJZAO010000027.1 GeneMarkS-2+ CDS 28265 28546 . + 0 ID=cds-WP_224019435.1;Parent=gene-LDO50_RS04260;Dbxref=GenBank:WP_224019435.1;Name=WP_224019435.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS04260;product=hypothetical protein;protein_id=WP_224019435.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq pseudogene 28511 28703 . - . ID=gene-LDO50_RS04265;Name=LDO50_RS04265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS04265;partial=true;pseudo=true;start_range=.,28511 NZ_CAJZAO010000027.1 Protein Homology CDS 28511 28703 . - 0 ID=cds-LDO50_RS04265;Parent=gene-LDO50_RS04265;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611734.1;locus_tag=LDO50_RS04265;partial=true;product=transposase;pseudo=true;start_range=.,28511;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 28945 29529 . + . ID=gene-LDO50_RS04270;Name=LDO50_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04270;old_locus_tag=BVI1335_1220037 NZ_CAJZAO010000027.1 GeneMarkS-2+ CDS 28945 29529 . + 0 ID=cds-WP_146230209.1;Parent=gene-LDO50_RS04270;Dbxref=GenBank:WP_146230209.1;Name=WP_146230209.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS04270;product=hypothetical protein;protein_id=WP_146230209.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 29756 30556 . + . ID=gene-LDO50_RS04275;Name=LDO50_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04275;old_locus_tag=BVI1335_1220038 NZ_CAJZAO010000027.1 Protein Homology CDS 29756 30556 . + 0 ID=cds-WP_244096535.1;Parent=gene-LDO50_RS04275;Dbxref=GenBank:WP_244096535.1;Name=WP_244096535.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722733.1;locus_tag=LDO50_RS04275;product=FkbM family methyltransferase;protein_id=WP_244096535.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 31083 31604 . + . ID=gene-LDO50_RS04280;Name=LDO50_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04280 NZ_CAJZAO010000027.1 Protein Homology CDS 31083 31604 . + 0 ID=cds-WP_081056110.1;Parent=gene-LDO50_RS04280;Dbxref=GenBank:WP_081056110.1;Name=WP_081056110.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024479.6;locus_tag=LDO50_RS04280;product=DUF3916 domain-containing protein;protein_id=WP_081056110.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 31808 32107 . + . ID=gene-LDO50_RS04285;Name=LDO50_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04285;old_locus_tag=BVI1335_1220042 NZ_CAJZAO010000027.1 GeneMarkS-2+ CDS 31808 32107 . + 0 ID=cds-WP_041493797.1;Parent=gene-LDO50_RS04285;Dbxref=GenBank:WP_041493797.1;Name=WP_041493797.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS04285;product=hypothetical protein;protein_id=WP_041493797.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 32267 32827 . + . ID=gene-LDO50_RS04290;Name=LDO50_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04290;old_locus_tag=BVI1335_1220044 NZ_CAJZAO010000027.1 GeneMarkS-2+ CDS 32267 32827 . + 0 ID=cds-WP_146125928.1;Parent=gene-LDO50_RS04290;Dbxref=GenBank:WP_146125928.1;Name=WP_146125928.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS04290;product=hypothetical protein;protein_id=WP_146125928.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 33028 33143 . + . ID=gene-LDO50_RS04295;Name=LDO50_RS04295;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS04295 NZ_CAJZAO010000027.1 tRNAscan-SE tRNA 33028 33143 . + . ID=rna-LDO50_RS04295;Parent=gene-LDO50_RS04295;anticodon=(pos:33102..33104);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS04295;product=tRNA-Cys NZ_CAJZAO010000027.1 tRNAscan-SE exon 33028 33143 . + . ID=exon-LDO50_RS04295-1;Parent=rna-LDO50_RS04295;anticodon=(pos:33102..33104);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS04295;product=tRNA-Cys NZ_CAJZAO010000027.1 RefSeq gene 33235 33783 . - . ID=gene-LDO50_RS04300;Name=LDO50_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04300;old_locus_tag=BVI1335_1220047 NZ_CAJZAO010000027.1 Protein Homology CDS 33235 33783 . - 0 ID=cds-WP_011883979.1;Parent=gene-LDO50_RS04300;Dbxref=GenBank:WP_011883979.1;Name=WP_011883979.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482197.1;locus_tag=LDO50_RS04300;product=GNAT family N-acetyltransferase;protein_id=WP_011883979.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 33780 34445 . - . ID=gene-LDO50_RS04305;Name=LDO50_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04305;old_locus_tag=BVI1335_1220048 NZ_CAJZAO010000027.1 Protein Homology CDS 33780 34445 . - 0 ID=cds-WP_059460894.1;Parent=gene-LDO50_RS04305;Dbxref=GenBank:WP_059460894.1;Name=WP_059460894.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722736.1;locus_tag=LDO50_RS04305;product=helix-turn-helix domain-containing protein;protein_id=WP_059460894.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 34595 34831 . + . ID=gene-LDO50_RS04310;Name=LDO50_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04310;old_locus_tag=BVI1335_1220049 NZ_CAJZAO010000027.1 Protein Homology CDS 34595 34831 . + 0 ID=cds-WP_014722737.1;Parent=gene-LDO50_RS04310;Dbxref=GenBank:WP_014722737.1;Name=WP_014722737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722737.1;locus_tag=LDO50_RS04310;product=ParD-like family protein;protein_id=WP_014722737.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 34831 35637 . + . ID=gene-LDO50_RS04315;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=LDO50_RS04315;old_locus_tag=BVI1335_1220050 NZ_CAJZAO010000027.1 Protein Homology CDS 34831 35637 . + 0 ID=cds-WP_011883982.1;Parent=gene-LDO50_RS04315;Dbxref=GenBank:WP_011883982.1;Name=WP_011883982.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751860.1;locus_tag=LDO50_RS04315;product=type I methionyl aminopeptidase;protein_id=WP_011883982.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 35764 36276 . - . ID=gene-LDO50_RS04320;Name=LDO50_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04320;old_locus_tag=BVI1335_1220052 NZ_CAJZAO010000027.1 Protein Homology CDS 35764 36276 . - 0 ID=cds-WP_034194211.1;Parent=gene-LDO50_RS04320;Dbxref=GenBank:WP_034194211.1;Name=WP_034194211.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883983.1;locus_tag=LDO50_RS04320;product=GAF domain-containing protein;protein_id=WP_034194211.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 36435 37352 . - . ID=gene-LDO50_RS04325;Name=LDO50_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04325;old_locus_tag=BVI1335_1220053 NZ_CAJZAO010000027.1 Protein Homology CDS 36435 37352 . - 0 ID=cds-WP_059462937.1;Parent=gene-LDO50_RS04325;Dbxref=GenBank:WP_059462937.1;Name=WP_059462937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333193.1;locus_tag=LDO50_RS04325;product=LysR family transcriptional regulator;protein_id=WP_059462937.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 37463 38329 . + . ID=gene-LDO50_RS04330;Name=LDO50_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04330;old_locus_tag=BVI1335_1220054 NZ_CAJZAO010000027.1 Protein Homology CDS 37463 38329 . + 0 ID=cds-WP_059559064.1;Parent=gene-LDO50_RS04330;Dbxref=GenBank:WP_059559064.1;Name=WP_059559064.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532092.1;locus_tag=LDO50_RS04330;product=pirin family protein;protein_id=WP_059559064.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 38461 38952 . + . ID=gene-LDO50_RS04335;Name=LDO50_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04335;old_locus_tag=BVI1335_1220055 NZ_CAJZAO010000027.1 Protein Homology CDS 38461 38952 . + 0 ID=cds-WP_011883986.1;Parent=gene-LDO50_RS04335;Dbxref=GenBank:WP_011883986.1;Name=WP_011883986.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897627.1;locus_tag=LDO50_RS04335;product=GNAT family N-acetyltransferase;protein_id=WP_011883986.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 38975 39847 . - . ID=gene-LDO50_RS04340;Name=LDO50_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04340;old_locus_tag=BVI1335_1220056 NZ_CAJZAO010000027.1 Protein Homology CDS 38975 39847 . - 0 ID=cds-WP_011883987.1;Parent=gene-LDO50_RS04340;Dbxref=GenBank:WP_011883987.1;Name=WP_011883987.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009955133.1;locus_tag=LDO50_RS04340;product=cytochrome c oxidase assembly protein;protein_id=WP_011883987.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 39858 40304 . - . ID=gene-LDO50_RS04345;Name=LDO50_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04345;old_locus_tag=BVI1335_1220057 NZ_CAJZAO010000027.1 Protein Homology CDS 39858 40304 . - 0 ID=cds-WP_011883988.1;Parent=gene-LDO50_RS04345;Dbxref=GenBank:WP_011883988.1;Name=WP_011883988.1;Ontology_term=GO:0016531;gbkey=CDS;go_function=copper chaperone activity|0016531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476464.1;locus_tag=LDO50_RS04345;product=copper chaperone PCu(A)C;protein_id=WP_011883988.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 40312 40956 . - . ID=gene-LDO50_RS04350;Name=LDO50_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04350;old_locus_tag=BVI1335_1220058 NZ_CAJZAO010000027.1 Protein Homology CDS 40312 40956 . - 0 ID=cds-WP_014722744.1;Parent=gene-LDO50_RS04350;Dbxref=GenBank:WP_014722744.1;Name=WP_014722744.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544964.1;locus_tag=LDO50_RS04350;product=SCO family protein;protein_id=WP_014722744.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 41228 41980 . + . ID=gene-LDO50_RS04355;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=LDO50_RS04355;old_locus_tag=BVI1335_1220060 NZ_CAJZAO010000027.1 Protein Homology CDS 41228 41980 . + 0 ID=cds-WP_011883990.1;Parent=gene-LDO50_RS04355;Dbxref=GenBank:WP_011883990.1;Name=WP_011883990.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213775.1;locus_tag=LDO50_RS04355;product=trehalose-phosphatase;protein_id=WP_011883990.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 41977 43353 . + . ID=gene-LDO50_RS04360;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=LDO50_RS04360;old_locus_tag=BVI1335_1220061 NZ_CAJZAO010000027.1 Protein Homology CDS 41977 43353 . + 0 ID=cds-WP_011883991.1;Parent=gene-LDO50_RS04360;Dbxref=GenBank:WP_011883991.1;Name=WP_011883991.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476461.1;locus_tag=LDO50_RS04360;product=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming);protein_id=WP_011883991.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 43469 45301 . - . ID=gene-LDO50_RS04365;Name=LDO50_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04365;old_locus_tag=BVI1335_1220062 NZ_CAJZAO010000027.1 Protein Homology CDS 43469 45301 . - 0 ID=cds-WP_060092333.1;Parent=gene-LDO50_RS04365;Dbxref=GenBank:WP_060092333.1;Name=WP_060092333.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401234.1;locus_tag=LDO50_RS04365;product=ABC transporter ATP-binding protein;protein_id=WP_060092333.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 45883 46947 . + . ID=gene-LDO50_RS04370;Name=LDO50_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04370;old_locus_tag=BVI1335_1220063 NZ_CAJZAO010000027.1 Protein Homology CDS 45883 46947 . + 0 ID=cds-WP_011883993.1;Parent=gene-LDO50_RS04370;Dbxref=GenBank:WP_011883993.1;Name=WP_011883993.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527452.1;locus_tag=LDO50_RS04370;product=glycosyltransferase family 4 protein;protein_id=WP_011883993.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 47194 47994 . + . ID=gene-LDO50_RS04375;Name=LDO50_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04375;old_locus_tag=BVI1335_1220065 NZ_CAJZAO010000027.1 Protein Homology CDS 47194 47994 . + 0 ID=cds-WP_011883994.1;Parent=gene-LDO50_RS04375;Dbxref=GenBank:WP_011883994.1;Name=WP_011883994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751848.1;locus_tag=LDO50_RS04375;product=hypothetical protein;protein_id=WP_011883994.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 48032 48496 . + . ID=gene-LDO50_RS04380;Name=LDO50_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04380;old_locus_tag=BVI1335_1220066 NZ_CAJZAO010000027.1 Protein Homology CDS 48032 48496 . + 0 ID=cds-WP_011883995.1;Parent=gene-LDO50_RS04380;Dbxref=GenBank:WP_011883995.1;Name=WP_011883995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476457.1;locus_tag=LDO50_RS04380;product=DUF2214 family protein;protein_id=WP_011883995.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 48585 49937 . - . ID=gene-LDO50_RS04385;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=LDO50_RS04385;old_locus_tag=BVI1335_1220067 NZ_CAJZAO010000027.1 Protein Homology CDS 48585 49937 . - 0 ID=cds-WP_011883996.1;Parent=gene-LDO50_RS04385;Dbxref=GenBank:WP_011883996.1;Name=WP_011883996.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764752.1;locus_tag=LDO50_RS04385;product=glucarate dehydratase;protein_id=WP_011883996.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 50361 51122 . + . ID=gene-LDO50_RS04390;Name=LDO50_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04390;old_locus_tag=BVI1335_1220068 NZ_CAJZAO010000027.1 Protein Homology CDS 50361 51122 . + 0 ID=cds-WP_011883997.1;Parent=gene-LDO50_RS04390;Dbxref=GenBank:WP_011883997.1;Name=WP_011883997.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883997.1;locus_tag=LDO50_RS04390;product=FadR/GntR family transcriptional regulator;protein_id=WP_011883997.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 51338 52486 . - . ID=gene-LDO50_RS04395;Name=LDO50_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04395;old_locus_tag=BVI1335_1220069 NZ_CAJZAO010000027.1 Protein Homology CDS 51338 52486 . - 0 ID=cds-WP_011883998.1;Parent=gene-LDO50_RS04395;Dbxref=GenBank:WP_011883998.1;Name=WP_011883998.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497706.1;locus_tag=LDO50_RS04395;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_011883998.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 52873 55017 . - . ID=gene-LDO50_RS04400;Name=LDO50_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04400;old_locus_tag=BVI1335_1220070 NZ_CAJZAO010000027.1 Protein Homology CDS 52873 55017 . - 0 ID=cds-WP_059568537.1;Parent=gene-LDO50_RS04400;Dbxref=GenBank:WP_059568537.1;Name=WP_059568537.1;Ontology_term=GO:0034480;gbkey=CDS;go_function=phosphatidylcholine phospholipase C activity|0034480||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484309.1;locus_tag=LDO50_RS04400;product=phosphocholine-specific phospholipase C;protein_id=WP_059568537.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 55302 56162 . - . ID=gene-LDO50_RS04405;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=LDO50_RS04405;old_locus_tag=BVI1335_1220071 NZ_CAJZAO010000027.1 Protein Homology CDS 55302 56162 . - 0 ID=cds-WP_011884000.1;Parent=gene-LDO50_RS04405;Dbxref=GenBank:WP_011884000.1;Name=WP_011884000.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884000.1;locus_tag=LDO50_RS04405;product=pyridoxal kinase PdxY;protein_id=WP_011884000.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 56338 57396 . + . ID=gene-LDO50_RS04410;Name=LDO50_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04410;old_locus_tag=BVI1335_1220072 NZ_CAJZAO010000027.1 Protein Homology CDS 56338 57396 . + 0 ID=cds-WP_059568536.1;Parent=gene-LDO50_RS04410;Dbxref=GenBank:WP_059568536.1;Name=WP_059568536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884001.1;locus_tag=LDO50_RS04410;product=alpha/beta fold hydrolase;protein_id=WP_059568536.1;transl_table=11 NZ_CAJZAO010000027.1 RefSeq gene 57457 58455 . - . ID=gene-LDO50_RS04415;Name=LDO50_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04415;old_locus_tag=BVI1335_1220073 NZ_CAJZAO010000027.1 Protein Homology CDS 57457 58455 . - 0 ID=cds-WP_011884003.1;Parent=gene-LDO50_RS04415;Dbxref=GenBank:WP_011884003.1;Name=WP_011884003.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656385.1;locus_tag=LDO50_RS04415;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_011884003.1;transl_table=11 ##sequence-region NZ_CAJZAO010000028.1 1 47822 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000028.1 RefSeq region 1 47822 . + . ID=NZ_CAJZAO010000028.1:1..47822;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_123 NZ_CAJZAO010000028.1 RefSeq gene 1 140 . - . ID=gene-LDO50_RS31270;Name=LDO50_RS31270;end_range=140,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31270;partial=true;start_range=.,1 NZ_CAJZAO010000028.1 Protein Homology CDS 1 140 . - 1 ID=cds-WP_443797711.1;Parent=gene-LDO50_RS31270;Dbxref=GenBank:WP_443797711.1;Name=WP_443797711.1;end_range=140,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372574.1;locus_tag=LDO50_RS31270;partial=true;product=ATP-binding protein;protein_id=WP_443797711.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 151 1474 . - . ID=gene-LDO50_RS04420;Name=LDO50_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04420;old_locus_tag=BVI1335_1230002;partial=true;start_range=.,151 NZ_CAJZAO010000028.1 Protein Homology CDS 151 1474 . - 0 ID=cds-WP_443797712.1;Parent=gene-LDO50_RS04420;Dbxref=GenBank:WP_443797712.1;Name=WP_443797712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372574.1;locus_tag=LDO50_RS04420;partial=true;product=MEDS domain-containing protein;protein_id=WP_443797712.1;start_range=.,151;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 1840 2106 . + . ID=gene-LDO50_RS04425;Name=LDO50_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04425;old_locus_tag=BVI1335_1230003 NZ_CAJZAO010000028.1 Protein Homology CDS 1840 2106 . + 0 ID=cds-WP_034192811.1;Parent=gene-LDO50_RS04425;Dbxref=GenBank:WP_034192811.1;Name=WP_034192811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481270.1;locus_tag=LDO50_RS04425;product=hypothetical protein;protein_id=WP_034192811.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 2201 3205 . + . ID=gene-LDO50_RS04430;Name=LDO50_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04430;old_locus_tag=BVI1335_1230004 NZ_CAJZAO010000028.1 Protein Homology CDS 2201 3205 . + 0 ID=cds-WP_224019436.1;Parent=gene-LDO50_RS04430;Dbxref=GenBank:WP_224019436.1;Name=WP_224019436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399019.1;locus_tag=LDO50_RS04430;product=SDR family oxidoreductase;protein_id=WP_224019436.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 3247 3618 . - . ID=gene-LDO50_RS04435;Name=LDO50_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04435;old_locus_tag=BVI1335_1230005 NZ_CAJZAO010000028.1 GeneMarkS-2+ CDS 3247 3618 . - 0 ID=cds-WP_224019437.1;Parent=gene-LDO50_RS04435;Dbxref=GenBank:WP_224019437.1;Name=WP_224019437.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS04435;product=hypothetical protein;protein_id=WP_224019437.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 3624 3794 . - . ID=gene-LDO50_RS04440;Name=LDO50_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04440;old_locus_tag=BVI1335_1230006 NZ_CAJZAO010000028.1 GeneMarkS-2+ CDS 3624 3794 . - 0 ID=cds-WP_224019439.1;Parent=gene-LDO50_RS04440;Dbxref=GenBank:WP_224019439.1;Name=WP_224019439.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS04440;product=hypothetical protein;protein_id=WP_224019439.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 4100 4420 . - . ID=gene-LDO50_RS04445;Name=LDO50_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04445;old_locus_tag=BVI1335_1230008 NZ_CAJZAO010000028.1 Protein Homology CDS 4100 4420 . - 0 ID=cds-WP_224019441.1;Parent=gene-LDO50_RS04445;Dbxref=GenBank:WP_224019441.1;Name=WP_224019441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349774.1;locus_tag=LDO50_RS04445;product=hypothetical protein;protein_id=WP_224019441.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 4739 5509 . + . ID=gene-LDO50_RS04450;Name=LDO50_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04450;old_locus_tag=BVI1335_1230009 NZ_CAJZAO010000028.1 Protein Homology CDS 4739 5509 . + 0 ID=cds-WP_059548186.1;Parent=gene-LDO50_RS04450;Dbxref=GenBank:WP_059548186.1;Name=WP_059548186.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725761.1;locus_tag=LDO50_RS04450;product=class I SAM-dependent methyltransferase;protein_id=WP_059548186.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 5579 7096 . - . ID=gene-LDO50_RS04455;Name=LDO50_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04455;old_locus_tag=BVI1335_1230011 NZ_CAJZAO010000028.1 Protein Homology CDS 5579 7096 . - 0 ID=cds-WP_224019443.1;Parent=gene-LDO50_RS04455;Dbxref=GenBank:WP_224019443.1;Name=WP_224019443.1;Ontology_term=GO:0006281,GO:0003677,GO:0003913,GO:0050660;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA photolyase activity|0003913||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880029.1;locus_tag=LDO50_RS04455;product=cryptochrome/photolyase family protein;protein_id=WP_224019443.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 7178 7420 . - . ID=gene-LDO50_RS04460;Name=LDO50_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04460;old_locus_tag=BVI1335_1230012 NZ_CAJZAO010000028.1 GeneMarkS-2+ CDS 7178 7420 . - 0 ID=cds-WP_224019445.1;Parent=gene-LDO50_RS04460;Dbxref=GenBank:WP_224019445.1;Name=WP_224019445.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS04460;product=hypothetical protein;protein_id=WP_224019445.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 7575 8534 . + . ID=gene-LDO50_RS04465;Name=LDO50_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04465;old_locus_tag=BVI1335_1230013 NZ_CAJZAO010000028.1 Protein Homology CDS 7575 8534 . + 0 ID=cds-WP_059496340.1;Parent=gene-LDO50_RS04465;Dbxref=GenBank:WP_059496340.1;Name=WP_059496340.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725764.1;locus_tag=LDO50_RS04465;product=alpha/beta hydrolase;protein_id=WP_059496340.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 8635 9606 . - . ID=gene-LDO50_RS04470;Name=LDO50_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04470;old_locus_tag=BVI1335_1230014 NZ_CAJZAO010000028.1 Protein Homology CDS 8635 9606 . - 0 ID=cds-WP_011880031.1;Parent=gene-LDO50_RS04470;Dbxref=GenBank:WP_011880031.1;Name=WP_011880031.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880031.1;locus_tag=LDO50_RS04470;product=MerR family transcriptional regulator;protein_id=WP_011880031.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 9633 9791 . + . ID=gene-LDO50_RS04475;Name=LDO50_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04475 NZ_CAJZAO010000028.1 GeneMarkS-2+ CDS 9633 9791 . + 0 ID=cds-WP_155623519.1;Parent=gene-LDO50_RS04475;Dbxref=GenBank:WP_155623519.1;Name=WP_155623519.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS04475;product=hypothetical protein;protein_id=WP_155623519.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 9858 11387 . + . ID=gene-LDO50_RS04480;Name=LDO50_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04480;old_locus_tag=BVI1335_1230015 NZ_CAJZAO010000028.1 Protein Homology CDS 9858 11387 . + 0 ID=cds-WP_059496343.1;Parent=gene-LDO50_RS04480;Dbxref=GenBank:WP_059496343.1;Name=WP_059496343.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218202.1;locus_tag=LDO50_RS04480;product=cryptochrome/photolyase family protein;protein_id=WP_059496343.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 11596 12651 . - . ID=gene-LDO50_RS04485;Name=LDO50_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04485;old_locus_tag=BVI1335_1230016 NZ_CAJZAO010000028.1 Protein Homology CDS 11596 12651 . - 0 ID=cds-WP_046427401.1;Parent=gene-LDO50_RS04485;Dbxref=GenBank:WP_046427401.1;Name=WP_046427401.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880033.1;locus_tag=LDO50_RS04485;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_046427401.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 12740 13447 . - . ID=gene-LDO50_RS04490;Name=LDO50_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04490;old_locus_tag=BVI1335_1230017 NZ_CAJZAO010000028.1 Protein Homology CDS 12740 13447 . - 0 ID=cds-WP_011880034.1;Parent=gene-LDO50_RS04490;Dbxref=GenBank:WP_011880034.1;Name=WP_011880034.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725769.1;locus_tag=LDO50_RS04490;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_011880034.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 13561 14292 . - . ID=gene-LDO50_RS04495;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=LDO50_RS04495;old_locus_tag=BVI1335_1230018 NZ_CAJZAO010000028.1 Protein Homology CDS 13561 14292 . - 0 ID=cds-WP_059496344.1;Parent=gene-LDO50_RS04495;Dbxref=GenBank:WP_059496344.1;Name=WP_059496344.1;Ontology_term=GO:0042559,GO:0046654,GO:0003934,GO:0005525,GO:0008270;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA,GTP binding|0005525||IEA,zinc ion binding|0008270||IEA;go_process=pteridine-containing compound biosynthetic process|0042559||IEA,tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880035.1;locus_tag=LDO50_RS04495;product=GTP cyclohydrolase I;protein_id=WP_059496344.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 14386 15186 . - . ID=gene-LDO50_RS04500;Name=LDO50_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04500;old_locus_tag=BVI1335_1230019 NZ_CAJZAO010000028.1 Protein Homology CDS 14386 15186 . - 0 ID=cds-WP_045579631.1;Parent=gene-LDO50_RS04500;Dbxref=GenBank:WP_045579631.1;Name=WP_045579631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725770.1;locus_tag=LDO50_RS04500;product=hypothetical protein;protein_id=WP_045579631.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 15729 15899 . - . ID=gene-LDO50_RS04505;Name=LDO50_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04505 NZ_CAJZAO010000028.1 Protein Homology CDS 15729 15899 . - 0 ID=cds-WP_080957734.1;Parent=gene-LDO50_RS04505;Dbxref=GenBank:WP_080957734.1;Name=WP_080957734.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021526.6;locus_tag=LDO50_RS04505;product=DUF2256 domain-containing protein;protein_id=WP_080957734.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 15994 16530 . - . ID=gene-LDO50_RS04510;Name=LDO50_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04510;old_locus_tag=BVI1335_1230023 NZ_CAJZAO010000028.1 Protein Homology CDS 15994 16530 . - 0 ID=cds-WP_011880038.1;Parent=gene-LDO50_RS04510;Dbxref=GenBank:WP_011880038.1;Name=WP_011880038.1;Ontology_term=GO:0016872;gbkey=CDS;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725771.1;locus_tag=LDO50_RS04510;product=chalcone isomerase family protein;protein_id=WP_011880038.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 16532 17749 . - . ID=gene-LDO50_RS04515;Name=LDO50_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04515;old_locus_tag=BVI1335_1230024 NZ_CAJZAO010000028.1 Protein Homology CDS 16532 17749 . - 0 ID=cds-WP_224019447.1;Parent=gene-LDO50_RS04515;Dbxref=GenBank:WP_224019447.1;Name=WP_224019447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725772.1;locus_tag=LDO50_RS04515;product=SAM-dependent methyltransferase;protein_id=WP_224019447.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 17746 18600 . - . ID=gene-LDO50_RS04520;Name=LDO50_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04520;old_locus_tag=BVI1335_1230025 NZ_CAJZAO010000028.1 Protein Homology CDS 17746 18600 . - 0 ID=cds-WP_011880040.1;Parent=gene-LDO50_RS04520;Dbxref=GenBank:WP_011880040.1;Name=WP_011880040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725773.1;locus_tag=LDO50_RS04520;product=DUF1365 domain-containing protein;protein_id=WP_011880040.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 18597 19907 . - . ID=gene-LDO50_RS04525;Name=LDO50_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04525;old_locus_tag=BVI1335_1230026 NZ_CAJZAO010000028.1 Protein Homology CDS 18597 19907 . - 0 ID=cds-WP_059548206.1;Parent=gene-LDO50_RS04525;Dbxref=GenBank:WP_059548206.1;Name=WP_059548206.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725774.1;locus_tag=LDO50_RS04525;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_059548206.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 20000 20614 . - . ID=gene-LDO50_RS04530;Name=LDO50_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04530;old_locus_tag=BVI1335_1230027 NZ_CAJZAO010000028.1 Protein Homology CDS 20000 20614 . - 0 ID=cds-WP_059548208.1;Parent=gene-LDO50_RS04530;Dbxref=GenBank:WP_059548208.1;Name=WP_059548208.1;Ontology_term=GO:0006950,GO:0008289,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=lipid binding|0008289||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725775.1;locus_tag=LDO50_RS04530;product=lipocalin family protein;protein_id=WP_059548208.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 20623 21723 . - . ID=gene-LDO50_RS04535;Name=LDO50_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04535;old_locus_tag=BVI1335_1230028 NZ_CAJZAO010000028.1 Protein Homology CDS 20623 21723 . - 0 ID=cds-WP_059548209.1;Parent=gene-LDO50_RS04535;Dbxref=GenBank:WP_059548209.1;Name=WP_059548209.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218186.1;locus_tag=LDO50_RS04535;product=SAM-dependent methyltransferase;protein_id=WP_059548209.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 21723 22553 . - . ID=gene-LDO50_RS04540;Name=LDO50_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04540;old_locus_tag=BVI1335_1230029 NZ_CAJZAO010000028.1 Protein Homology CDS 21723 22553 . - 0 ID=cds-WP_059548210.1;Parent=gene-LDO50_RS04540;Dbxref=GenBank:WP_059548210.1;Name=WP_059548210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880044.1;locus_tag=LDO50_RS04540;product=DUF1295 domain-containing protein;protein_id=WP_059548210.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 22709 23440 . - . ID=gene-LDO50_RS04545;Name=LDO50_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04545;old_locus_tag=BVI1335_1230030 NZ_CAJZAO010000028.1 Protein Homology CDS 22709 23440 . - 0 ID=cds-WP_059548211.1;Parent=gene-LDO50_RS04545;Dbxref=GenBank:WP_059548211.1;Name=WP_059548211.1;Ontology_term=GO:0006417,GO:0016989,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sigma factor antagonist activity|0016989||IEA;go_process=regulation of translation|0006417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880045.1;locus_tag=LDO50_RS04545;product=anti-sigma factor;protein_id=WP_059548211.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 23437 24048 . - . ID=gene-LDO50_RS04550;Name=LDO50_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04550;old_locus_tag=BVI1335_1230031 NZ_CAJZAO010000028.1 Protein Homology CDS 23437 24048 . - 0 ID=cds-WP_059548212.1;Parent=gene-LDO50_RS04550;Dbxref=GenBank:WP_059548212.1;Name=WP_059548212.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725779.1;locus_tag=LDO50_RS04550;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_059548212.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 24291 24860 . + . ID=gene-LDO50_RS04555;Name=LDO50_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04555;old_locus_tag=BVI1335_1230032 NZ_CAJZAO010000028.1 Protein Homology CDS 24291 24860 . + 0 ID=cds-WP_059548213.1;Parent=gene-LDO50_RS04555;Dbxref=GenBank:WP_059548213.1;Name=WP_059548213.1;Ontology_term=GO:0006950,GO:0008289,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=lipid binding|0008289||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725780.1;locus_tag=LDO50_RS04555;product=lipocalin family protein;protein_id=WP_059548213.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 24999 25658 . - . ID=gene-LDO50_RS04560;Name=LDO50_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04560;old_locus_tag=BVI1335_1230033 NZ_CAJZAO010000028.1 Protein Homology CDS 24999 25658 . - 0 ID=cds-WP_014725781.1;Parent=gene-LDO50_RS04560;Dbxref=GenBank:WP_014725781.1;Name=WP_014725781.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725781.1;locus_tag=LDO50_RS04560;product=carbonic anhydrase;protein_id=WP_014725781.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 26052 27005 . + . ID=gene-LDO50_RS04565;Name=LDO50_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04565;old_locus_tag=BVI1335_1230034 NZ_CAJZAO010000028.1 Protein Homology CDS 26052 27005 . + 0 ID=cds-WP_011880049.1;Parent=gene-LDO50_RS04565;Dbxref=GenBank:WP_011880049.1;Name=WP_011880049.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414930.1;locus_tag=LDO50_RS04565;product=GlxA family transcriptional regulator;protein_id=WP_011880049.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 27589 28230 . + . ID=gene-LDO50_RS04570;Name=LDO50_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04570;old_locus_tag=BVI1335_1230036 NZ_CAJZAO010000028.1 Protein Homology CDS 27589 28230 . + 0 ID=cds-WP_011880051.1;Parent=gene-LDO50_RS04570;Dbxref=GenBank:WP_011880051.1;Name=WP_011880051.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880051.1;locus_tag=LDO50_RS04570;product=response regulator transcription factor;protein_id=WP_011880051.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 28427 29668 . - . ID=gene-LDO50_RS04575;Name=LDO50_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04575;old_locus_tag=BVI1335_1230037 NZ_CAJZAO010000028.1 Protein Homology CDS 28427 29668 . - 0 ID=cds-WP_059548312.1;Parent=gene-LDO50_RS04575;Dbxref=GenBank:WP_059548312.1;Name=WP_059548312.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725786.1;locus_tag=LDO50_RS04575;product=sensor histidine kinase;protein_id=WP_059548312.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 30046 30495 . + . ID=gene-LDO50_RS04580;Name=LDO50_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04580;old_locus_tag=BVI1335_1230038 NZ_CAJZAO010000028.1 Protein Homology CDS 30046 30495 . + 0 ID=cds-WP_081054696.1;Parent=gene-LDO50_RS04580;Dbxref=GenBank:WP_081054696.1;Name=WP_081054696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880053.1;locus_tag=LDO50_RS04580;product=DUF3331 domain-containing protein;protein_id=WP_081054696.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 30633 31001 . + . ID=gene-LDO50_RS04585;Name=LDO50_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04585;old_locus_tag=BVI1335_1230039 NZ_CAJZAO010000028.1 Protein Homology CDS 30633 31001 . + 0 ID=cds-WP_224019449.1;Parent=gene-LDO50_RS04585;Dbxref=GenBank:WP_224019449.1;Name=WP_224019449.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490921.1;locus_tag=LDO50_RS04585;product=response regulator transcription factor;protein_id=WP_224019449.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 31258 31704 . - . ID=gene-LDO50_RS04590;Name=LDO50_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04590;old_locus_tag=BVI1335_1230040 NZ_CAJZAO010000028.1 Protein Homology CDS 31258 31704 . - 0 ID=cds-WP_059548216.1;Parent=gene-LDO50_RS04590;Dbxref=GenBank:WP_059548216.1;Name=WP_059548216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725788.1;locus_tag=LDO50_RS04590;product=cupin domain-containing protein;protein_id=WP_059548216.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 31841 32812 . + . ID=gene-LDO50_RS04595;Name=LDO50_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04595;old_locus_tag=BVI1335_1230041 NZ_CAJZAO010000028.1 Protein Homology CDS 31841 32812 . + 0 ID=cds-WP_069223945.1;Parent=gene-LDO50_RS04595;Dbxref=GenBank:WP_069223945.1;Name=WP_069223945.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024039.6;locus_tag=LDO50_RS04595;product=AraC family transcriptional regulator;protein_id=WP_069223945.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 33031 33927 . - . ID=gene-LDO50_RS04600;Name=LDO50_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04600;old_locus_tag=BVI1335_1230042 NZ_CAJZAO010000028.1 Protein Homology CDS 33031 33927 . - 0 ID=cds-WP_059548220.1;Parent=gene-LDO50_RS04600;Dbxref=GenBank:WP_059548220.1;Name=WP_059548220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372458.1;locus_tag=LDO50_RS04600;product=oxidoreductase;protein_id=WP_059548220.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 33924 35144 . - . ID=gene-LDO50_RS04605;Name=LDO50_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04605;old_locus_tag=BVI1335_1230043 NZ_CAJZAO010000028.1 Protein Homology CDS 33924 35144 . - 0 ID=cds-WP_069223718.1;Parent=gene-LDO50_RS04605;Dbxref=GenBank:WP_069223718.1;Name=WP_069223718.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880058.1;locus_tag=LDO50_RS04605;product=MFS transporter;protein_id=WP_069223718.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 35283 36218 . + . ID=gene-LDO50_RS04610;Name=LDO50_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04610;old_locus_tag=BVI1335_1230044 NZ_CAJZAO010000028.1 Protein Homology CDS 35283 36218 . + 0 ID=cds-WP_059548224.1;Parent=gene-LDO50_RS04610;Dbxref=GenBank:WP_059548224.1;Name=WP_059548224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880059.1;locus_tag=LDO50_RS04610;product=LysR substrate-binding domain-containing protein;protein_id=WP_059548224.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq pseudogene 36215 36541 . - . ID=gene-LDO50_RS04615;Name=LDO50_RS04615;end_range=36541,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS04615;partial=true;pseudo=true;start_range=.,36215 NZ_CAJZAO010000028.1 Protein Homology CDS 36215 36541 . - 0 ID=cds-LDO50_RS04615;Parent=gene-LDO50_RS04615;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=36541,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612095.1;locus_tag=LDO50_RS04615;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,36215;transl_table=11 NZ_CAJZAO010000028.1 RefSeq pseudogene 36605 36733 . + . ID=gene-LDO50_RS04620;Name=LDO50_RS04620;end_range=36733,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS04620;partial=true;pseudo=true NZ_CAJZAO010000028.1 Protein Homology CDS 36605 36733 . + 0 ID=cds-LDO50_RS04620;Parent=gene-LDO50_RS04620;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=36733,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020912304.1;locus_tag=LDO50_RS04620;partial=true;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CAJZAO010000028.1 RefSeq pseudogene 36740 37308 . - . ID=gene-LDO50_RS04625;Name=LDO50_RS04625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS04625;partial=true;pseudo=true;start_range=.,36740 NZ_CAJZAO010000028.1 Protein Homology CDS 36740 37308 . - 0 ID=cds-LDO50_RS04625;Parent=gene-LDO50_RS04625;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612082.1;locus_tag=LDO50_RS04625;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,36740;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 37539 39149 . - . ID=gene-LDO50_RS04630;Name=LDO50_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04630;old_locus_tag=BVI1335_1230048 NZ_CAJZAO010000028.1 Protein Homology CDS 37539 39149 . - 0 ID=cds-WP_059493742.1;Parent=gene-LDO50_RS04630;Dbxref=GenBank:WP_059493742.1;Name=WP_059493742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725808.1;locus_tag=LDO50_RS04630;product=carbamoyltransferase C-terminal domain-containing protein;protein_id=WP_059493742.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 39181 40248 . - . ID=gene-LDO50_RS04635;Name=LDO50_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04635;old_locus_tag=BVI1335_1230049 NZ_CAJZAO010000028.1 Protein Homology CDS 39181 40248 . - 0 ID=cds-WP_059548227.1;Parent=gene-LDO50_RS04635;Dbxref=GenBank:WP_059548227.1;Name=WP_059548227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725809.1;locus_tag=LDO50_RS04635;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_059548227.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 40904 41980 . + . ID=gene-LDO50_RS04640;Name=LDO50_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04640;old_locus_tag=BVI1335_1230051 NZ_CAJZAO010000028.1 Protein Homology CDS 40904 41980 . + 0 ID=cds-WP_011880062.1;Parent=gene-LDO50_RS04640;Dbxref=GenBank:WP_011880062.1;Name=WP_011880062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880062.1;locus_tag=LDO50_RS04640;product=hydrogenase small subunit;protein_id=WP_011880062.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 42045 43901 . + . ID=gene-LDO50_RS04645;Name=LDO50_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04645;old_locus_tag=BVI1335_1230052 NZ_CAJZAO010000028.1 Protein Homology CDS 42045 43901 . + 0 ID=cds-WP_011880063.1;Parent=gene-LDO50_RS04645;Dbxref=GenBank:WP_011880063.1;Name=WP_011880063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019574237.1;locus_tag=LDO50_RS04645;product=nickel-dependent hydrogenase large subunit;protein_id=WP_011880063.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 44020 44730 . + . ID=gene-LDO50_RS04650;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=LDO50_RS04650;old_locus_tag=BVI1335_1230053 NZ_CAJZAO010000028.1 Protein Homology CDS 44020 44730 . + 0 ID=cds-WP_011880064.1;Parent=gene-LDO50_RS04650;Dbxref=GenBank:WP_011880064.1;Name=WP_011880064.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016020;gbkey=CDS;gene=cybH;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880064.1;locus_tag=LDO50_RS04650;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=WP_011880064.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 44738 45415 . + . ID=gene-LDO50_RS04655;Name=LDO50_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04655;old_locus_tag=BVI1335_1230054 NZ_CAJZAO010000028.1 Protein Homology CDS 44738 45415 . + 0 ID=cds-WP_059457496.1;Parent=gene-LDO50_RS04655;Dbxref=GenBank:WP_059457496.1;Name=WP_059457496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880065.1;locus_tag=LDO50_RS04655;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_059457496.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 45406 45756 . + . ID=gene-LDO50_RS04660;Name=LDO50_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04660;old_locus_tag=BVI1335_1230055 NZ_CAJZAO010000028.1 Protein Homology CDS 45406 45756 . + 0 ID=cds-WP_212198985.1;Parent=gene-LDO50_RS04660;Dbxref=GenBank:WP_212198985.1;Name=WP_212198985.1;Ontology_term=GO:0051604,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880066.1;locus_tag=LDO50_RS04660;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WP_212198985.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 45753 46286 . + . ID=gene-LDO50_RS04665;Name=LDO50_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04665;old_locus_tag=BVI1335_1230057 NZ_CAJZAO010000028.1 Protein Homology CDS 45753 46286 . + 0 ID=cds-WP_212198983.1;Parent=gene-LDO50_RS04665;Dbxref=GenBank:WP_212198983.1;Name=WP_212198983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880067.1;locus_tag=LDO50_RS04665;product=hydrogenase;protein_id=WP_212198983.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq pseudogene 46304 47132 . + . ID=gene-LDO50_RS04670;Name=LDO50_RS04670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS04670;pseudo=true NZ_CAJZAO010000028.1 Protein Homology CDS 46304 47132 . + 0 ID=cds-LDO50_RS04670;Parent=gene-LDO50_RS04670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880068.1;locus_tag=LDO50_RS04670;product=hydrogenase expression/formation protein;pseudo=true;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 47135 47362 . + . ID=gene-LDO50_RS04675;Name=LDO50_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04675;old_locus_tag=BVI1335_1230056 NZ_CAJZAO010000028.1 Protein Homology CDS 47135 47362 . + 0 ID=cds-WP_011880069.1;Parent=gene-LDO50_RS04675;Dbxref=GenBank:WP_011880069.1;Name=WP_011880069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880069.1;locus_tag=LDO50_RS04675;product=rubredoxin;protein_id=WP_011880069.1;transl_table=11 NZ_CAJZAO010000028.1 RefSeq gene 47365 47822 . + . ID=gene-LDO50_RS04680;Name=hybE;end_range=47822,.;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=LDO50_RS04680;partial=true NZ_CAJZAO010000028.1 Protein Homology CDS 47365 47822 . + 0 ID=cds-WP_224019451.1;Parent=gene-LDO50_RS04680;Dbxref=GenBank:WP_224019451.1;Name=WP_224019451.1;end_range=47822,.;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725815.1;locus_tag=LDO50_RS04680;partial=true;product=[NiFe]-hydrogenase assembly chaperone HybE;protein_id=WP_224019451.1;transl_table=11 ##sequence-region NZ_CAJZAO010000029.1 1 31096 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000029.1 RefSeq region 1 31096 . + . ID=NZ_CAJZAO010000029.1:1..31096;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_124 NZ_CAJZAO010000029.1 RefSeq gene 335 2920 . + . ID=gene-LDO50_RS04685;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=LDO50_RS04685;old_locus_tag=BVI1335_1240002 NZ_CAJZAO010000029.1 Protein Homology CDS 335 2920 . + 0 ID=cds-WP_011879819.1;Parent=gene-LDO50_RS04685;Dbxref=GenBank:WP_011879819.1;Name=WP_011879819.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004633909.1;locus_tag=LDO50_RS04685;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_011879819.1;transl_table=11 NZ_CAJZAO010000029.1 RefSeq gene 3086 3598 . - . ID=gene-LDO50_RS04690;Name=LDO50_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04690;old_locus_tag=BVI1335_1240003 NZ_CAJZAO010000029.1 Protein Homology CDS 3086 3598 . - 0 ID=cds-WP_011879818.1;Parent=gene-LDO50_RS04690;Dbxref=GenBank:WP_011879818.1;Name=WP_011879818.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725633.1;locus_tag=LDO50_RS04690;product=chemotaxis protein CheW;protein_id=WP_011879818.1;transl_table=11 NZ_CAJZAO010000029.1 RefSeq gene 3635 5356 . - . ID=gene-LDO50_RS04695;Name=LDO50_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04695;old_locus_tag=BVI1335_1240004 NZ_CAJZAO010000029.1 Protein Homology CDS 3635 5356 . - 0 ID=cds-WP_224019453.1;Parent=gene-LDO50_RS04695;Dbxref=GenBank:WP_224019453.1;Name=WP_224019453.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193473.1;locus_tag=LDO50_RS04695;product=methyl-accepting chemotaxis protein;protein_id=WP_224019453.1;transl_table=11 NZ_CAJZAO010000029.1 RefSeq gene 5959 7119 . - . ID=gene-LDO50_RS04700;Name=LDO50_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04700;old_locus_tag=BVI1335_1240006 NZ_CAJZAO010000029.1 Protein Homology CDS 5959 7119 . - 0 ID=cds-WP_059456142.1;Parent=gene-LDO50_RS04700;Dbxref=GenBank:WP_059456142.1;Name=WP_059456142.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363591.1;locus_tag=LDO50_RS04700;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_059456142.1;transl_table=11 NZ_CAJZAO010000029.1 RefSeq gene 7122 10091 . - . ID=gene-LDO50_RS04705;Name=LDO50_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04705;old_locus_tag=BVI1335_1240007 NZ_CAJZAO010000029.1 Protein Homology CDS 7122 10091 . - 0 ID=cds-WP_011879815.1;Parent=gene-LDO50_RS04705;Dbxref=GenBank:WP_011879815.1;Name=WP_011879815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725630.1;locus_tag=LDO50_RS04705;product=PAS domain S-box protein;protein_id=WP_011879815.1;transl_table=11 NZ_CAJZAO010000029.1 RefSeq gene 10104 15107 . - . ID=gene-LDO50_RS04710;Name=LDO50_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04710;old_locus_tag=BVI1335_1240008 NZ_CAJZAO010000029.1 Protein Homology CDS 10104 15107 . - 0 ID=cds-WP_224019454.1;Parent=gene-LDO50_RS04710;Dbxref=GenBank:WP_224019454.1;Name=WP_224019454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725629.1;locus_tag=LDO50_RS04710;product=AAA family ATPase;protein_id=WP_224019454.1;transl_table=11 NZ_CAJZAO010000029.1 RefSeq gene 15126 15806 . - . ID=gene-LDO50_RS04715;Name=LDO50_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04715;old_locus_tag=BVI1335_1240009 NZ_CAJZAO010000029.1 Protein Homology CDS 15126 15806 . - 0 ID=cds-WP_011879813.1;Parent=gene-LDO50_RS04715;Dbxref=GenBank:WP_011879813.1;Name=WP_011879813.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363588.1;locus_tag=LDO50_RS04715;product=response regulator transcription factor;protein_id=WP_011879813.1;transl_table=11 NZ_CAJZAO010000029.1 RefSeq gene 16158 17594 . + . ID=gene-LDO50_RS04720;Name=LDO50_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04720;old_locus_tag=BVI1335_1240010 NZ_CAJZAO010000029.1 Protein Homology CDS 16158 17594 . + 0 ID=cds-WP_224019455.1;Parent=gene-LDO50_RS04720;Dbxref=GenBank:WP_224019455.1;Name=WP_224019455.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725626.1;locus_tag=LDO50_RS04720;product=ATP-binding protein;protein_id=WP_224019455.1;transl_table=11 NZ_CAJZAO010000029.1 RefSeq pseudogene 17688 17801 . + . ID=gene-LDO50_RS04725;Name=LDO50_RS04725;end_range=17801,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS04725;partial=true;pseudo=true;start_range=.,17688 NZ_CAJZAO010000029.1 Protein Homology CDS 17688 17801 . + 0 ID=cds-LDO50_RS04725;Parent=gene-LDO50_RS04725;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=17801,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012405805.1;locus_tag=LDO50_RS04725;partial=true;product=branched-chain amino acid ABC transporter substrate-binding protein;pseudo=true;start_range=.,17688;transl_table=11 NZ_CAJZAO010000029.1 RefSeq gene 17860 18771 . - . ID=gene-LDO50_RS04730;Name=LDO50_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04730;old_locus_tag=BVI1335_1240011 NZ_CAJZAO010000029.1 Protein Homology CDS 17860 18771 . - 0 ID=cds-WP_224019456.1;Parent=gene-LDO50_RS04730;Dbxref=GenBank:WP_224019456.1;Name=WP_224019456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753109.1;locus_tag=LDO50_RS04730;product=hypothetical protein;protein_id=WP_224019456.1;transl_table=11 NZ_CAJZAO010000029.1 RefSeq gene 18842 19165 . - . ID=gene-LDO50_RS04735;Name=LDO50_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04735;old_locus_tag=BVI1335_1240012 NZ_CAJZAO010000029.1 Protein Homology CDS 18842 19165 . - 0 ID=cds-WP_011879810.1;Parent=gene-LDO50_RS04735;Dbxref=GenBank:WP_011879810.1;Name=WP_011879810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481332.1;locus_tag=LDO50_RS04735;product=TfoX/Sxy family protein;protein_id=WP_011879810.1;transl_table=11 NZ_CAJZAO010000029.1 RefSeq gene 19475 20740 . - . ID=gene-LDO50_RS04740;Name=LDO50_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04740;old_locus_tag=BVI1335_1240013 NZ_CAJZAO010000029.1 Protein Homology CDS 19475 20740 . - 0 ID=cds-WP_034195614.1;Parent=gene-LDO50_RS04740;Dbxref=GenBank:WP_034195614.1;Name=WP_034195614.1;Ontology_term=GO:0055085,GO:0015112,GO:0022857;gbkey=CDS;go_function=nitrate transmembrane transporter activity|0015112||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879809.1;locus_tag=LDO50_RS04740;product=MFS transporter;protein_id=WP_034195614.1;transl_table=11 NZ_CAJZAO010000029.1 RefSeq gene 20755 21543 . - . ID=gene-LDO50_RS04745;Name=LDO50_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04745;old_locus_tag=BVI1335_1240014 NZ_CAJZAO010000029.1 Protein Homology CDS 20755 21543 . - 0 ID=cds-WP_014725621.1;Parent=gene-LDO50_RS04745;Dbxref=GenBank:WP_014725621.1;Name=WP_014725621.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402923.1;locus_tag=LDO50_RS04745;product=peptidylprolyl isomerase;protein_id=WP_014725621.1;transl_table=11 NZ_CAJZAO010000029.1 RefSeq gene 21554 22237 . - . ID=gene-LDO50_RS04750;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=LDO50_RS04750;old_locus_tag=BVI1335_1240015 NZ_CAJZAO010000029.1 Protein Homology CDS 21554 22237 . - 0 ID=cds-WP_212199230.1;Parent=gene-LDO50_RS04750;Dbxref=GenBank:WP_212199230.1;Name=WP_212199230.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004528383.1;locus_tag=LDO50_RS04750;product=respiratory nitrate reductase subunit gamma;protein_id=WP_212199230.1;transl_table=11 NZ_CAJZAO010000029.1 RefSeq gene 22264 22959 . - . ID=gene-LDO50_RS04755;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=LDO50_RS04755;old_locus_tag=BVI1335_1240016 NZ_CAJZAO010000029.1 Protein Homology CDS 22264 22959 . - 0 ID=cds-WP_224019457.1;Parent=gene-LDO50_RS04755;Dbxref=GenBank:WP_224019457.1;Name=WP_224019457.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402921.1;locus_tag=LDO50_RS04755;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_224019457.1;transl_table=11 NZ_CAJZAO010000029.1 RefSeq gene 22956 24485 . - . ID=gene-LDO50_RS04760;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=LDO50_RS04760;old_locus_tag=BVI1335_1240017 NZ_CAJZAO010000029.1 Protein Homology CDS 22956 24485 . - 0 ID=cds-WP_224019458.1;Parent=gene-LDO50_RS04760;Dbxref=GenBank:WP_224019458.1;Name=WP_224019458.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011205549.1;locus_tag=LDO50_RS04760;product=nitrate reductase subunit beta;protein_id=WP_224019458.1;transl_table=11 NZ_CAJZAO010000029.1 RefSeq gene 24482 28246 . - . ID=gene-LDO50_RS04765;Name=LDO50_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04765;old_locus_tag=BVI1335_1240018 NZ_CAJZAO010000029.1 Protein Homology CDS 24482 28246 . - 0 ID=cds-WP_224019459.1;Parent=gene-LDO50_RS04765;Dbxref=GenBank:WP_224019459.1;Name=WP_224019459.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217825.1;locus_tag=LDO50_RS04765;product=nitrate reductase subunit alpha;protein_id=WP_224019459.1;transl_table=11 NZ_CAJZAO010000029.1 RefSeq gene 29281 29472 . - . ID=gene-LDO50_RS04770;Name=LDO50_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04770;old_locus_tag=BVI1335_1240020 NZ_CAJZAO010000029.1 Protein Homology CDS 29281 29472 . - 0 ID=cds-WP_011879803.1;Parent=gene-LDO50_RS04770;Dbxref=GenBank:WP_011879803.1;Name=WP_011879803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879803.1;locus_tag=LDO50_RS04770;product=DUF2964 family protein;protein_id=WP_011879803.1;transl_table=11 NZ_CAJZAO010000029.1 RefSeq gene 29489 29965 . - . ID=gene-LDO50_RS04775;Name=LDO50_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04775;old_locus_tag=BVI1335_1240021 NZ_CAJZAO010000029.1 Protein Homology CDS 29489 29965 . - 0 ID=cds-WP_059456134.1;Parent=gene-LDO50_RS04775;Dbxref=GenBank:WP_059456134.1;Name=WP_059456134.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879802.1;locus_tag=LDO50_RS04775;product=universal stress protein;protein_id=WP_059456134.1;transl_table=11 NZ_CAJZAO010000029.1 RefSeq gene 30193 30891 . + . ID=gene-LDO50_RS04780;Name=LDO50_RS04780;end_range=30891,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04780;old_locus_tag=BVI1335_1240022;partial=true NZ_CAJZAO010000029.1 Protein Homology CDS 30193 30891 . + 0 ID=cds-WP_443797713.1;Parent=gene-LDO50_RS04780;Dbxref=GenBank:WP_443797713.1;Name=WP_443797713.1;Ontology_term=GO:0008684,GO:0030145;end_range=30891,.;gbkey=CDS;go_function=2-oxopent-4-enoate hydratase activity|0008684||IEA,manganese ion binding|0030145||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372760.1;locus_tag=LDO50_RS04780;partial=true;product=2-keto-4-pentenoate hydratase;protein_id=WP_443797713.1;transl_table=11 ##sequence-region NZ_CAJZAO010000030.1 1 52127 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000030.1 RefSeq region 1 52127 . + . ID=NZ_CAJZAO010000030.1:1..52127;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_125 NZ_CAJZAO010000030.1 RefSeq gene 1 270 . + . ID=gene-LDO50_RS04785;Name=LDO50_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04785;old_locus_tag=BVI1335_1250001;partial=true;start_range=.,1 NZ_CAJZAO010000030.1 GeneMarkS-2+ CDS 1 270 . + 0 ID=cds-WP_224019465.1;Parent=gene-LDO50_RS04785;Dbxref=GenBank:WP_224019465.1;Name=WP_224019465.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS04785;partial=true;product=hypothetical protein;protein_id=WP_224019465.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 210 497 . - . ID=gene-LDO50_RS04790;Name=LDO50_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04790 NZ_CAJZAO010000030.1 Protein Homology CDS 210 497 . - 0 ID=cds-WP_072465597.1;Parent=gene-LDO50_RS04790;Dbxref=GenBank:WP_072465597.1;Name=WP_072465597.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029250.1;locus_tag=LDO50_RS04790;product=PAAR domain-containing protein;protein_id=WP_072465597.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 510 1547 . - . ID=gene-LDO50_RS04795;Name=LDO50_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04795;old_locus_tag=BVI1335_1250002 NZ_CAJZAO010000030.1 Protein Homology CDS 510 1547 . - 0 ID=cds-WP_232356122.1;Parent=gene-LDO50_RS04795;Dbxref=GenBank:WP_232356122.1;Name=WP_232356122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495766.1;locus_tag=LDO50_RS04795;product=T6SS immunity protein Tli4 family protein;protein_id=WP_232356122.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 1541 3472 . - . ID=gene-LDO50_RS04800;Name=LDO50_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04800;old_locus_tag=BVI1335_1250003 NZ_CAJZAO010000030.1 Protein Homology CDS 1541 3472 . - 0 ID=cds-WP_224019460.1;Parent=gene-LDO50_RS04800;Dbxref=GenBank:WP_224019460.1;Name=WP_224019460.1;Ontology_term=GO:0016042,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767224.1;locus_tag=LDO50_RS04800;product=esterase/lipase family protein;protein_id=WP_224019460.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq pseudogene 3511 6297 . - . ID=gene-LDO50_RS04805;Name=LDO50_RS04805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS04805;pseudo=true NZ_CAJZAO010000030.1 Protein Homology CDS 3511 6297 . - 0 ID=cds-LDO50_RS04805;Parent=gene-LDO50_RS04805;Note=internal stop;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760191.1;locus_tag=LDO50_RS04805;product=type VI secretion system Vgr family protein;pseudo=true;transl_table=11 NZ_CAJZAO010000030.1 RefSeq pseudogene 6843 7073 . + . ID=gene-LDO50_RS04810;Name=LDO50_RS04810;end_range=7073,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS04810;partial=true;pseudo=true NZ_CAJZAO010000030.1 Protein Homology CDS 6843 7073 . + 0 ID=cds-LDO50_RS04810;Parent=gene-LDO50_RS04810;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=7073,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558218.1;locus_tag=LDO50_RS04810;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 7209 7302 . - . ID=gene-LDO50_RS04815;Name=LDO50_RS04815;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS04815;old_locus_tag=BVI1335_TRNA26 NZ_CAJZAO010000030.1 tRNAscan-SE tRNA 7209 7302 . - . ID=rna-LDO50_RS04815;Parent=gene-LDO50_RS04815;anticodon=(pos:complement(7266..7268));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS04815;product=tRNA-Ser NZ_CAJZAO010000030.1 tRNAscan-SE exon 7209 7302 . - . ID=exon-LDO50_RS04815-1;Parent=rna-LDO50_RS04815;anticodon=(pos:complement(7266..7268));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS04815;product=tRNA-Ser NZ_CAJZAO010000030.1 RefSeq gene 7413 8666 . - . ID=gene-LDO50_RS04820;Name=LDO50_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04820;old_locus_tag=BVI1335_1250009 NZ_CAJZAO010000030.1 Protein Homology CDS 7413 8666 . - 0 ID=cds-WP_011885194.1;Parent=gene-LDO50_RS04820;Dbxref=GenBank:WP_011885194.1;Name=WP_011885194.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885194.1;locus_tag=LDO50_RS04820;product=aspartate kinase;protein_id=WP_011885194.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq pseudogene 8649 8886 . + . ID=gene-LDO50_RS31275;Name=LDO50_RS31275;end_range=8886,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31275;partial=true;pseudo=true NZ_CAJZAO010000030.1 Protein Homology CDS 8649 8886 . + 0 ID=cds-LDO50_RS31275;Parent=gene-LDO50_RS31275;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=8886,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010104874.1;locus_tag=LDO50_RS31275;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 9008 10414 . - . ID=gene-LDO50_RS04825;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=LDO50_RS04825;old_locus_tag=BVI1335_1250011 NZ_CAJZAO010000030.1 Protein Homology CDS 9008 10414 . - 0 ID=cds-WP_060044878.1;Parent=gene-LDO50_RS04825;Dbxref=GenBank:WP_060044878.1;Name=WP_060044878.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328792.1;locus_tag=LDO50_RS04825;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_060044878.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 10458 11429 . - . ID=gene-LDO50_RS04830;Name=LDO50_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04830;old_locus_tag=BVI1335_1250012 NZ_CAJZAO010000030.1 Protein Homology CDS 10458 11429 . - 0 ID=cds-WP_011885196.1;Parent=gene-LDO50_RS04830;Dbxref=GenBank:WP_011885196.1;Name=WP_011885196.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065573.1;locus_tag=LDO50_RS04830;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_011885196.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 11529 12392 . - . ID=gene-LDO50_RS04835;Name=LDO50_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04835;old_locus_tag=BVI1335_1250013 NZ_CAJZAO010000030.1 Protein Homology CDS 11529 12392 . - 0 ID=cds-WP_045578966.1;Parent=gene-LDO50_RS04835;Dbxref=GenBank:WP_045578966.1;Name=WP_045578966.1;Ontology_term=GO:0006281,GO:0019104,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885197.1;locus_tag=LDO50_RS04835;product=DNA-3-methyladenine glycosylase family protein;protein_id=WP_045578966.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 12436 13833 . - . ID=gene-LDO50_RS04840;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=LDO50_RS04840;old_locus_tag=BVI1335_1250014 NZ_CAJZAO010000030.1 Protein Homology CDS 12436 13833 . - 0 ID=cds-WP_059561508.1;Parent=gene-LDO50_RS04840;Dbxref=GenBank:WP_059561508.1;Name=WP_059561508.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011488917.1;locus_tag=LDO50_RS04840;product=cysteine--tRNA ligase;protein_id=WP_059561508.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 14068 14790 . + . ID=gene-LDO50_RS04845;Name=LDO50_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04845;old_locus_tag=BVI1335_1250016 NZ_CAJZAO010000030.1 Protein Homology CDS 14068 14790 . + 0 ID=cds-WP_059474239.1;Parent=gene-LDO50_RS04845;Dbxref=GenBank:WP_059474239.1;Name=WP_059474239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851871.1;locus_tag=LDO50_RS04845;product=tetratricopeptide repeat protein;protein_id=WP_059474239.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 14830 15405 . + . ID=gene-LDO50_RS04850;Name=LDO50_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04850;old_locus_tag=BVI1335_1250017 NZ_CAJZAO010000030.1 Protein Homology CDS 14830 15405 . + 0 ID=cds-WP_059457919.1;Parent=gene-LDO50_RS04850;Dbxref=GenBank:WP_059457919.1;Name=WP_059457919.1;Ontology_term=GO:0000413,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein peptidyl-prolyl isomerization|0000413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364186.1;locus_tag=LDO50_RS04850;product=peptidylprolyl isomerase;protein_id=WP_059457919.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 15494 15985 . + . ID=gene-LDO50_RS04855;Name=LDO50_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04855;old_locus_tag=BVI1335_1250018 NZ_CAJZAO010000030.1 Protein Homology CDS 15494 15985 . + 0 ID=cds-WP_011885201.1;Parent=gene-LDO50_RS04855;Dbxref=GenBank:WP_011885201.1;Name=WP_011885201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016345694.1;locus_tag=LDO50_RS04855;product=peptidylprolyl isomerase;protein_id=WP_011885201.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 16012 16812 . + . ID=gene-LDO50_RS04860;Name=LDO50_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04860;old_locus_tag=BVI1335_1250019 NZ_CAJZAO010000030.1 Protein Homology CDS 16012 16812 . + 0 ID=cds-WP_014723259.1;Parent=gene-LDO50_RS04860;Dbxref=GenBank:WP_014723259.1;Name=WP_014723259.1;Ontology_term=GO:0009245,GO:0016462;gbkey=CDS;go_function=pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763970.1;locus_tag=LDO50_RS04860;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_014723259.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 16890 17663 . - . ID=gene-LDO50_RS04865;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=LDO50_RS04865;old_locus_tag=BVI1335_1250020 NZ_CAJZAO010000030.1 Protein Homology CDS 16890 17663 . - 0 ID=cds-WP_011885203.1;Parent=gene-LDO50_RS04865;Dbxref=GenBank:WP_011885203.1;Name=WP_011885203.1;Ontology_term=GO:0006535,GO:0009001,GO:0005737;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||IEA;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885203.1;locus_tag=LDO50_RS04865;product=serine O-acetyltransferase;protein_id=WP_011885203.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 17842 18666 . - . ID=gene-LDO50_RS04870;Name=LDO50_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04870;old_locus_tag=BVI1335_1250022 NZ_CAJZAO010000030.1 Protein Homology CDS 17842 18666 . - 0 ID=cds-WP_014723261.1;Parent=gene-LDO50_RS04870;Dbxref=GenBank:WP_014723261.1;Name=WP_014723261.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364188.1;locus_tag=LDO50_RS04870;product=RNA methyltransferase;protein_id=WP_014723261.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 18946 19749 . + . ID=gene-LDO50_RS04875;Name=LDO50_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04875;old_locus_tag=BVI1335_1250021 NZ_CAJZAO010000030.1 Protein Homology CDS 18946 19749 . + 0 ID=cds-WP_011885205.1;Parent=gene-LDO50_RS04875;Dbxref=GenBank:WP_011885205.1;Name=WP_011885205.1;Ontology_term=GO:0006020,GO:0008934,GO:0046872;gbkey=CDS;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA,metal ion binding|0046872||IEA;go_process=inositol metabolic process|0006020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352522.1;locus_tag=LDO50_RS04875;product=inositol monophosphatase family protein;protein_id=WP_011885205.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 19862 21484 . + . ID=gene-LDO50_RS04880;Name=LDO50_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04880;old_locus_tag=BVI1335_1250023 NZ_CAJZAO010000030.1 Protein Homology CDS 19862 21484 . + 0 ID=cds-WP_045578964.1;Parent=gene-LDO50_RS04880;Dbxref=GenBank:WP_045578964.1;Name=WP_045578964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483988.1;locus_tag=LDO50_RS04880;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_045578964.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 22224 24881 . + . ID=gene-LDO50_RS04885;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=LDO50_RS04885;old_locus_tag=BVI1335_1250025 NZ_CAJZAO010000030.1 Protein Homology CDS 22224 24881 . + 0 ID=cds-WP_034192439.1;Parent=gene-LDO50_RS04885;Dbxref=GenBank:WP_034192439.1;Name=WP_034192439.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352525.1;locus_tag=LDO50_RS04885;product=DNA mismatch repair protein MutS;protein_id=WP_034192439.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 24862 26133 . + . ID=gene-LDO50_RS04890;Name=LDO50_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04890;old_locus_tag=BVI1335_1250026 NZ_CAJZAO010000030.1 Protein Homology CDS 24862 26133 . + 0 ID=cds-WP_034192438.1;Parent=gene-LDO50_RS04890;Dbxref=GenBank:WP_034192438.1;Name=WP_034192438.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885379.1;locus_tag=LDO50_RS04890;product=metallophosphoesterase;protein_id=WP_034192438.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 26113 26661 . - . ID=gene-LDO50_RS04895;Name=LDO50_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04895;old_locus_tag=BVI1335_1250027 NZ_CAJZAO010000030.1 Protein Homology CDS 26113 26661 . - 0 ID=cds-WP_011885380.1;Parent=gene-LDO50_RS04895;Dbxref=GenBank:WP_011885380.1;Name=WP_011885380.1;Ontology_term=GO:0006457,GO:0003755,GO:0046872;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,metal ion binding|0046872||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025990.1;locus_tag=LDO50_RS04895;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_011885380.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 26694 27914 . + . ID=gene-LDO50_RS04900;Name=LDO50_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04900;old_locus_tag=BVI1335_1250028 NZ_CAJZAO010000030.1 Protein Homology CDS 26694 27914 . + 0 ID=cds-WP_060091996.1;Parent=gene-LDO50_RS04900;Dbxref=GenBank:WP_060091996.1;Name=WP_060091996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761910.1;locus_tag=LDO50_RS04900;product=cupin domain-containing protein;protein_id=WP_060091996.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 27969 28214 . + . ID=gene-LDO50_RS31040;Name=LDO50_RS31040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31040 NZ_CAJZAO010000030.1 Protein Homology CDS 27969 28214 . + 0 ID=cds-WP_011657350.1;Parent=gene-LDO50_RS31040;Dbxref=GenBank:WP_011657350.1;Name=WP_011657350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657350.1;locus_tag=LDO50_RS31040;product=hypothetical protein;protein_id=WP_011657350.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 28235 28393 . - . ID=gene-LDO50_RS04905;Name=LDO50_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04905 NZ_CAJZAO010000030.1 Protein Homology CDS 28235 28393 . - 0 ID=cds-WP_014723266.1;Parent=gene-LDO50_RS04905;Dbxref=GenBank:WP_014723266.1;Name=WP_014723266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091987.1;locus_tag=LDO50_RS04905;product=hypothetical protein;protein_id=WP_014723266.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 28563 29339 . - . ID=gene-LDO50_RS04910;Name=LDO50_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04910;old_locus_tag=BVI1335_1250029 NZ_CAJZAO010000030.1 Protein Homology CDS 28563 29339 . - 0 ID=cds-WP_046428330.1;Parent=gene-LDO50_RS04910;Dbxref=GenBank:WP_046428330.1;Name=WP_046428330.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885382.1;locus_tag=LDO50_RS04910;product=MBL fold metallo-hydrolase;protein_id=WP_046428330.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 29344 30489 . - . ID=gene-LDO50_RS04915;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=LDO50_RS04915;old_locus_tag=BVI1335_1250030 NZ_CAJZAO010000030.1 Protein Homology CDS 29344 30489 . - 0 ID=cds-WP_011885383.1;Parent=gene-LDO50_RS04915;Dbxref=GenBank:WP_011885383.1;Name=WP_011885383.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904698.1;locus_tag=LDO50_RS04915;product=outer membrane protein assembly factor BamC;protein_id=WP_011885383.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 30601 31506 . - . ID=gene-LDO50_RS04920;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=LDO50_RS04920;old_locus_tag=BVI1335_1250031 NZ_CAJZAO010000030.1 Protein Homology CDS 30601 31506 . - 0 ID=cds-WP_011885384.1;Parent=gene-LDO50_RS04920;Dbxref=GenBank:WP_011885384.1;Name=WP_011885384.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751602.1;locus_tag=LDO50_RS04920;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_011885384.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 31554 32156 . - . ID=gene-LDO50_RS04925;Name=LDO50_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04925;old_locus_tag=BVI1335_1250032 NZ_CAJZAO010000030.1 Protein Homology CDS 31554 32156 . - 0 ID=cds-WP_059460481.1;Parent=gene-LDO50_RS04925;Dbxref=GenBank:WP_059460481.1;Name=WP_059460481.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401924.1;locus_tag=LDO50_RS04925;product=class I SAM-dependent methyltransferase;protein_id=WP_059460481.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 32166 33368 . - . ID=gene-LDO50_RS04930;Name=LDO50_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04930;old_locus_tag=BVI1335_1250033 NZ_CAJZAO010000030.1 Protein Homology CDS 32166 33368 . - 0 ID=cds-WP_011885386.1;Parent=gene-LDO50_RS04930;Dbxref=GenBank:WP_011885386.1;Name=WP_011885386.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010104925.1;locus_tag=LDO50_RS04930;product=tryptophan--tRNA ligase;protein_id=WP_011885386.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 33377 34039 . - . ID=gene-LDO50_RS04935;Name=LDO50_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04935;old_locus_tag=BVI1335_1250034 NZ_CAJZAO010000030.1 Protein Homology CDS 33377 34039 . - 0 ID=cds-WP_059460480.1;Parent=gene-LDO50_RS04935;Dbxref=GenBank:WP_059460480.1;Name=WP_059460480.1;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009980725.1;locus_tag=LDO50_RS04935;product=site-2 protease family protein;protein_id=WP_059460480.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 34085 34717 . - . ID=gene-LDO50_RS04940;Name=LDO50_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04940;old_locus_tag=BVI1335_1250035 NZ_CAJZAO010000030.1 Protein Homology CDS 34085 34717 . - 0 ID=cds-WP_059460479.1;Parent=gene-LDO50_RS04940;Dbxref=GenBank:WP_059460479.1;Name=WP_059460479.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885388.1;locus_tag=LDO50_RS04940;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_059460479.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 34794 35624 . - . ID=gene-LDO50_RS04945;Name=LDO50_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04945;old_locus_tag=BVI1335_1250036 NZ_CAJZAO010000030.1 Protein Homology CDS 34794 35624 . - 0 ID=cds-WP_034192434.1;Parent=gene-LDO50_RS04945;Dbxref=GenBank:WP_034192434.1;Name=WP_034192434.1;Ontology_term=GO:0016311,GO:0097657;gbkey=CDS;go_function=3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723269.1;locus_tag=LDO50_RS04945;product=3'%2C5'-nucleoside bisphosphate phosphatase;protein_id=WP_034192434.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 35707 36597 . - . ID=gene-LDO50_RS04950;Name=LDO50_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04950;old_locus_tag=BVI1335_1250037 NZ_CAJZAO010000030.1 Protein Homology CDS 35707 36597 . - 0 ID=cds-WP_011885390.1;Parent=gene-LDO50_RS04950;Dbxref=GenBank:WP_011885390.1;Name=WP_011885390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364204.1;locus_tag=LDO50_RS04950;product=alpha/beta fold hydrolase;protein_id=WP_011885390.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 36856 37713 . - . ID=gene-LDO50_RS04955;Name=LDO50_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04955;old_locus_tag=BVI1335_1250039 NZ_CAJZAO010000030.1 Protein Homology CDS 36856 37713 . - 0 ID=cds-WP_059474247.1;Parent=gene-LDO50_RS04955;Dbxref=GenBank:WP_059474247.1;Name=WP_059474247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763954.1;locus_tag=LDO50_RS04955;product=ferritin-like domain-containing protein;protein_id=WP_059474247.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 37865 38389 . + . ID=gene-LDO50_RS04960;Name=LDO50_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04960;old_locus_tag=BVI1335_1250040 NZ_CAJZAO010000030.1 Protein Homology CDS 37865 38389 . + 0 ID=cds-WP_011885392.1;Parent=gene-LDO50_RS04960;Dbxref=GenBank:WP_011885392.1;Name=WP_011885392.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890200.1;locus_tag=LDO50_RS04960;product=gamma carbonic anhydrase family protein;protein_id=WP_011885392.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 38415 39362 . + . ID=gene-LDO50_RS04965;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=LDO50_RS04965;old_locus_tag=BVI1335_1250041 NZ_CAJZAO010000030.1 Protein Homology CDS 38415 39362 . + 0 ID=cds-WP_014723272.1;Parent=gene-LDO50_RS04965;Dbxref=GenBank:WP_014723272.1;Name=WP_014723272.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213089.1;locus_tag=LDO50_RS04965;product=Hsp33 family molecular chaperone HslO;protein_id=WP_014723272.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 39526 39879 . + . ID=gene-LDO50_RS04970;Name=LDO50_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04970;old_locus_tag=BVI1335_1250042 NZ_CAJZAO010000030.1 Protein Homology CDS 39526 39879 . + 0 ID=cds-WP_011885394.1;Parent=gene-LDO50_RS04970;Dbxref=GenBank:WP_011885394.1;Name=WP_011885394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885394.1;locus_tag=LDO50_RS04970;product=hypothetical protein;protein_id=WP_011885394.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 39977 40399 . - . ID=gene-LDO50_RS04975;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=LDO50_RS04975;old_locus_tag=BVI1335_1250043 NZ_CAJZAO010000030.1 Protein Homology CDS 39977 40399 . - 0 ID=cds-WP_046428322.1;Parent=gene-LDO50_RS04975;Dbxref=GenBank:WP_046428322.1;Name=WP_046428322.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478407.1;locus_tag=LDO50_RS04975;product=cell division protein FtsB;protein_id=WP_046428322.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 40481 41764 . - . ID=gene-LDO50_RS04980;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=LDO50_RS04980;old_locus_tag=BVI1335_1250044 NZ_CAJZAO010000030.1 Protein Homology CDS 40481 41764 . - 0 ID=cds-WP_011885396.1;Parent=gene-LDO50_RS04980;Dbxref=GenBank:WP_011885396.1;Name=WP_011885396.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011001079.1;locus_tag=LDO50_RS04980;product=phosphopyruvate hydratase;protein_id=WP_011885396.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 41870 42724 . - . ID=gene-LDO50_RS04985;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=LDO50_RS04985;old_locus_tag=BVI1335_1250045 NZ_CAJZAO010000030.1 Protein Homology CDS 41870 42724 . - 0 ID=cds-WP_011885397.1;Parent=gene-LDO50_RS04985;Dbxref=GenBank:WP_011885397.1;Name=WP_011885397.1;Ontology_term=GO:0009058,GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364209.1;locus_tag=LDO50_RS04985;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_011885397.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 42721 44379 . - . ID=gene-LDO50_RS04990;Name=LDO50_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04990;old_locus_tag=BVI1335_1250046 NZ_CAJZAO010000030.1 Protein Homology CDS 42721 44379 . - 0 ID=cds-WP_011885398.1;Parent=gene-LDO50_RS04990;Dbxref=GenBank:WP_011885398.1;Name=WP_011885398.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904686.1;locus_tag=LDO50_RS04990;product=CTP synthase;protein_id=WP_011885398.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 44555 45400 . - . ID=gene-LDO50_RS04995;Name=LDO50_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS04995;old_locus_tag=BVI1335_1250047 NZ_CAJZAO010000030.1 Protein Homology CDS 44555 45400 . - 0 ID=cds-WP_011885399.1;Parent=gene-LDO50_RS04995;Dbxref=GenBank:WP_011885399.1;Name=WP_011885399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885399.1;locus_tag=LDO50_RS04995;product=alpha/beta fold hydrolase;protein_id=WP_011885399.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 45522 48032 . - . ID=gene-LDO50_RS05000;Name=LDO50_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05000;old_locus_tag=BVI1335_1250048 NZ_CAJZAO010000030.1 Protein Homology CDS 45522 48032 . - 0 ID=cds-WP_224019464.1;Parent=gene-LDO50_RS05000;Dbxref=GenBank:WP_224019464.1;Name=WP_224019464.1;Ontology_term=GO:0009290,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723274.1;locus_tag=LDO50_RS05000;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_224019464.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 48092 48880 . - . ID=gene-LDO50_RS05005;Name=LDO50_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05005;old_locus_tag=BVI1335_1250049 NZ_CAJZAO010000030.1 Protein Homology CDS 48092 48880 . - 0 ID=cds-WP_014723275.1;Parent=gene-LDO50_RS05005;Dbxref=GenBank:WP_014723275.1;Name=WP_014723275.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213084.1;locus_tag=LDO50_RS05005;product=TatD family hydrolase;protein_id=WP_014723275.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 48943 49701 . - . ID=gene-LDO50_RS05010;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=LDO50_RS05010;old_locus_tag=BVI1335_1250050 NZ_CAJZAO010000030.1 Protein Homology CDS 48943 49701 . - 0 ID=cds-WP_081071054.1;Parent=gene-LDO50_RS05010;Dbxref=GenBank:WP_081071054.1;Name=WP_081071054.1;Ontology_term=GO:0042953,GO:0005524,GO:0043190;gbkey=CDS;gene=lolD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007580373.1;locus_tag=LDO50_RS05010;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_081071054.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 49694 50947 . - . ID=gene-LDO50_RS05015;Name=LDO50_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05015;old_locus_tag=BVI1335_1250051 NZ_CAJZAO010000030.1 Protein Homology CDS 49694 50947 . - 0 ID=cds-WP_014723277.1;Parent=gene-LDO50_RS05015;Dbxref=GenBank:WP_014723277.1;Name=WP_014723277.1;Ontology_term=GO:0042953,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532144.1;locus_tag=LDO50_RS05015;product=lipoprotein-releasing ABC transporter permease subunit;protein_id=WP_014723277.1;transl_table=11 NZ_CAJZAO010000030.1 RefSeq gene 51155 52127 . + . ID=gene-LDO50_RS05020;Name=LDO50_RS05020;end_range=52127,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05020;partial=true NZ_CAJZAO010000030.1 Protein Homology CDS 51155 52127 . + 0 ID=cds-WP_224019462.1;Parent=gene-LDO50_RS05020;Dbxref=GenBank:WP_224019462.1;Name=WP_224019462.1;end_range=52127,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657369.1;locus_tag=LDO50_RS05020;partial=true;product=regulator;protein_id=WP_224019462.1;transl_table=11 ##sequence-region NZ_CAJZAO010000031.1 1 14827 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000031.1 RefSeq region 1 14827 . + . ID=NZ_CAJZAO010000031.1:1..14827;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_126 NZ_CAJZAO010000031.1 RefSeq gene 1 462 . - . ID=gene-LDO50_RS05025;Name=LDO50_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05025;partial=true;start_range=.,1 NZ_CAJZAO010000031.1 Protein Homology CDS 1 462 . - 0 ID=cds-WP_224019466.1;Parent=gene-LDO50_RS05025;Dbxref=GenBank:WP_224019466.1;Name=WP_224019466.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413094.1;locus_tag=LDO50_RS05025;partial=true;product=MFS transporter;protein_id=WP_224019466.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000031.1 RefSeq gene 860 1084 . - . ID=gene-LDO50_RS05030;Name=LDO50_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05030 NZ_CAJZAO010000031.1 Protein Homology CDS 860 1084 . - 0 ID=cds-WP_372586079.1;Parent=gene-LDO50_RS05030;Dbxref=GenBank:WP_372586079.1;Name=WP_372586079.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024242.6;locus_tag=LDO50_RS05030;product=helix-turn-helix transcriptional regulator;protein_id=WP_372586079.1;transl_table=11 NZ_CAJZAO010000031.1 RefSeq pseudogene 1253 2398 . - . ID=gene-LDO50_RS05035;Name=mnmD;gbkey=Gene;gene=mnmD;gene_biotype=pseudogene;locus_tag=LDO50_RS05035;old_locus_tag=BVI1335_1260002;partial=true;pseudo=true;start_range=.,1253 NZ_CAJZAO010000031.1 Protein Homology CDS 1253 2398 . - 0 ID=cds-LDO50_RS05035;Parent=gene-LDO50_RS05035;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004808;gbkey=CDS;gene=mnmD;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212457.1;locus_tag=LDO50_RS05035;partial=true;product=tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD;pseudo=true;start_range=.,1253;transl_table=11 NZ_CAJZAO010000031.1 RefSeq gene 2788 3066 . + . ID=gene-LDO50_RS05040;Name=LDO50_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05040;old_locus_tag=BVI1335_1260004 NZ_CAJZAO010000031.1 Protein Homology CDS 2788 3066 . + 0 ID=cds-WP_006401505.1;Parent=gene-LDO50_RS05040;Dbxref=GenBank:WP_006401505.1;Name=WP_006401505.1;Ontology_term=GO:0030261,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008352404.1;locus_tag=LDO50_RS05040;product=HU family DNA-binding protein;protein_id=WP_006401505.1;transl_table=11 NZ_CAJZAO010000031.1 RefSeq gene 3207 4517 . - . ID=gene-LDO50_RS05045;Name=LDO50_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05045;old_locus_tag=BVI1335_1260005 NZ_CAJZAO010000031.1 Protein Homology CDS 3207 4517 . - 0 ID=cds-WP_059695033.1;Parent=gene-LDO50_RS05045;Dbxref=GenBank:WP_059695033.1;Name=WP_059695033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759200.1;locus_tag=LDO50_RS05045;product=GTP-binding protein;protein_id=WP_059695033.1;transl_table=11 NZ_CAJZAO010000031.1 RefSeq gene 4663 5109 . - . ID=gene-LDO50_RS05050;Name=LDO50_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05050;old_locus_tag=BVI1335_1260006 NZ_CAJZAO010000031.1 Protein Homology CDS 4663 5109 . - 0 ID=cds-WP_014722145.1;Parent=gene-LDO50_RS05050;Dbxref=GenBank:WP_014722145.1;Name=WP_014722145.1;Ontology_term=GO:0000270,GO:0071555,GO:0008933;gbkey=CDS;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401507.1;locus_tag=LDO50_RS05050;product=lytic transglycosylase domain-containing protein;protein_id=WP_014722145.1;transl_table=11 NZ_CAJZAO010000031.1 RefSeq gene 5482 7806 . + . ID=gene-LDO50_RS05055;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=LDO50_RS05055;old_locus_tag=BVI1335_1260007 NZ_CAJZAO010000031.1 Protein Homology CDS 5482 7806 . + 0 ID=cds-WP_041493718.1;Parent=gene-LDO50_RS05055;Dbxref=GenBank:WP_041493718.1;Name=WP_041493718.1;Ontology_term=GO:0015628,GO:0015627,GO:0019867;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA,outer membrane|0019867||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544449.1;locus_tag=LDO50_RS05055;product=type II secretion system secretin GspD;protein_id=WP_041493718.1;transl_table=11 NZ_CAJZAO010000031.1 RefSeq gene 7803 9302 . + . ID=gene-LDO50_RS05060;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=LDO50_RS05060;old_locus_tag=BVI1335_1260008 NZ_CAJZAO010000031.1 Protein Homology CDS 7803 9302 . + 0 ID=cds-WP_011882775.1;Parent=gene-LDO50_RS05060;Dbxref=GenBank:WP_011882775.1;Name=WP_011882775.1;Ontology_term=GO:0015628,GO:0005524,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_function=ATP binding|0005524||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490004.1;locus_tag=LDO50_RS05060;product=type II secretion system ATPase GspE;protein_id=WP_011882775.1;transl_table=11 NZ_CAJZAO010000031.1 RefSeq gene 9307 10524 . + . ID=gene-LDO50_RS05065;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=LDO50_RS05065;old_locus_tag=BVI1335_1260009 NZ_CAJZAO010000031.1 Protein Homology CDS 9307 10524 . + 0 ID=cds-WP_011882774.1;Parent=gene-LDO50_RS05065;Dbxref=GenBank:WP_011882774.1;Name=WP_011882774.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477248.1;locus_tag=LDO50_RS05065;product=type II secretion system inner membrane protein GspF;protein_id=WP_011882774.1;transl_table=11 NZ_CAJZAO010000031.1 RefSeq gene 10555 10965 . - . ID=gene-LDO50_RS05070;Name=LDO50_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05070;old_locus_tag=BVI1335_1260010 NZ_CAJZAO010000031.1 Protein Homology CDS 10555 10965 . - 0 ID=cds-WP_011882773.1;Parent=gene-LDO50_RS05070;Dbxref=GenBank:WP_011882773.1;Name=WP_011882773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910818.1;locus_tag=LDO50_RS05070;product=hypothetical protein;protein_id=WP_011882773.1;transl_table=11 NZ_CAJZAO010000031.1 RefSeq gene 11139 11591 . + . ID=gene-LDO50_RS05075;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=LDO50_RS05075;old_locus_tag=BVI1335_1260012 NZ_CAJZAO010000031.1 Protein Homology CDS 11139 11591 . + 0 ID=cds-WP_011882772.1;Parent=gene-LDO50_RS05075;Dbxref=GenBank:WP_011882772.1;Name=WP_011882772.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751354.1;locus_tag=LDO50_RS05075;product=type II secretion system major pseudopilin GspG;protein_id=WP_011882772.1;transl_table=11 NZ_CAJZAO010000031.1 RefSeq gene 11634 12164 . + . ID=gene-LDO50_RS05080;Name=LDO50_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05080;old_locus_tag=BVI1335_1260013 NZ_CAJZAO010000031.1 Protein Homology CDS 11634 12164 . + 0 ID=cds-WP_041493717.1;Parent=gene-LDO50_RS05080;Dbxref=GenBank:WP_041493717.1;Name=WP_041493717.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751355.1;locus_tag=LDO50_RS05080;product=GspH/FimT family pseudopilin;protein_id=WP_041493717.1;transl_table=11 NZ_CAJZAO010000031.1 RefSeq gene 12161 12568 . + . ID=gene-LDO50_RS05085;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=LDO50_RS05085;old_locus_tag=BVI1335_1260014 NZ_CAJZAO010000031.1 Protein Homology CDS 12161 12568 . + 0 ID=cds-WP_014722141.1;Parent=gene-LDO50_RS05085;Dbxref=GenBank:WP_014722141.1;Name=WP_014722141.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524538.1;locus_tag=LDO50_RS05085;product=type II secretion system minor pseudopilin GspI;protein_id=WP_014722141.1;transl_table=11 NZ_CAJZAO010000031.1 RefSeq gene 12546 13250 . + . ID=gene-LDO50_RS05090;Name=LDO50_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05090;old_locus_tag=BVI1335_1260015 NZ_CAJZAO010000031.1 Protein Homology CDS 12546 13250 . + 0 ID=cds-WP_011882769.1;Parent=gene-LDO50_RS05090;Dbxref=GenBank:WP_011882769.1;Name=WP_011882769.1;Ontology_term=GO:0015628,GO:0005886,GO:0015627;gbkey=CDS;go_component=plasma membrane|0005886||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185018.1;locus_tag=LDO50_RS05090;product=PulJ/GspJ family protein;protein_id=WP_011882769.1;transl_table=11 NZ_CAJZAO010000031.1 RefSeq gene 13253 14353 . + . ID=gene-LDO50_RS05095;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=LDO50_RS05095;old_locus_tag=BVI1335_1260016 NZ_CAJZAO010000031.1 Protein Homology CDS 13253 14353 . + 0 ID=cds-WP_011882768.1;Parent=gene-LDO50_RS05095;Dbxref=GenBank:WP_011882768.1;Name=WP_011882768.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=gspK;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327583.1;locus_tag=LDO50_RS05095;product=type II secretion system minor pseudopilin GspK;protein_id=WP_011882768.1;transl_table=11 NZ_CAJZAO010000031.1 RefSeq gene 14378 14827 . + . ID=gene-LDO50_RS05100;Name=gspL;end_range=14827,.;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=LDO50_RS05100;partial=true NZ_CAJZAO010000031.1 Protein Homology CDS 14378 14827 . + 0 ID=cds-WP_253074455.1;Parent=gene-LDO50_RS05100;Dbxref=GenBank:WP_253074455.1;Name=WP_253074455.1;Ontology_term=GO:0015628,GO:0009276,GO:0015627;end_range=14827,.;gbkey=CDS;gene=gspL;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544455.1;locus_tag=LDO50_RS05100;partial=true;product=type II secretion system protein GspL;protein_id=WP_253074455.1;transl_table=11 ##sequence-region NZ_CAJZAO010000032.1 1 50429 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000032.1 RefSeq region 1 50429 . + . ID=NZ_CAJZAO010000032.1:1..50429;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_127 NZ_CAJZAO010000032.1 RefSeq gene 1 959 . - . ID=gene-LDO50_RS05105;Name=LDO50_RS05105;end_range=959,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05105;partial=true;start_range=.,1 NZ_CAJZAO010000032.1 Protein Homology CDS 1 959 . - 2 ID=cds-WP_443797714.1;Parent=gene-LDO50_RS05105;Dbxref=GenBank:WP_443797714.1;Name=WP_443797714.1;Ontology_term=GO:0005515;end_range=959,.;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601071.1;locus_tag=LDO50_RS05105;partial=true;product=tetratricopeptide repeat protein;protein_id=WP_443797714.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 970 1287 . - . ID=gene-LDO50_RS31280;Name=LDO50_RS31280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31280;old_locus_tag=BVI1335_1270002;partial=true;start_range=.,970 NZ_CAJZAO010000032.1 Protein Homology CDS 970 1287 . - 0 ID=cds-WP_443797715.1;Parent=gene-LDO50_RS31280;Dbxref=GenBank:WP_443797715.1;Name=WP_443797715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882524.1;locus_tag=LDO50_RS31280;partial=true;product=tetratricopeptide repeat protein;protein_id=WP_443797715.1;start_range=.,970;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 1284 4023 . - . ID=gene-LDO50_RS05110;Name=LDO50_RS05110;end_range=4023,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05110;old_locus_tag=BVI1335_1270003;partial=true NZ_CAJZAO010000032.1 Protein Homology CDS 1284 4023 . - 1 ID=cds-WP_443797716.1;Parent=gene-LDO50_RS05110;Dbxref=GenBank:WP_443797716.1;Name=WP_443797716.1;end_range=4023,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725298.1;locus_tag=LDO50_RS05110;partial=true;product=tetratricopeptide repeat protein;protein_id=WP_443797716.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 4034 4861 . - . ID=gene-LDO50_RS31285;Name=LDO50_RS31285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31285;old_locus_tag=BVI1335_1270004;partial=true;start_range=.,4034 NZ_CAJZAO010000032.1 Protein Homology CDS 4034 4861 . - 0 ID=cds-WP_443797717.1;Parent=gene-LDO50_RS31285;Dbxref=GenBank:WP_443797717.1;Name=WP_443797717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026849.1;locus_tag=LDO50_RS31285;partial=true;product=tetratricopeptide repeat protein;protein_id=WP_443797717.1;start_range=.,4034;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 4999 5661 . - . ID=gene-LDO50_RS05115;Name=LDO50_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05115;old_locus_tag=BVI1335_1270005 NZ_CAJZAO010000032.1 Protein Homology CDS 4999 5661 . - 0 ID=cds-WP_011882526.1;Parent=gene-LDO50_RS05115;Dbxref=GenBank:WP_011882526.1;Name=WP_011882526.1;Ontology_term=GO:0015628,GO:0005886,GO:0015627;gbkey=CDS;go_component=plasma membrane|0005886||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725299.1;locus_tag=LDO50_RS05115;product=PulJ/GspJ family protein;protein_id=WP_011882526.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 5645 6055 . - . ID=gene-LDO50_RS05120;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=LDO50_RS05120;old_locus_tag=BVI1335_1270006 NZ_CAJZAO010000032.1 Protein Homology CDS 5645 6055 . - 0 ID=cds-WP_063710896.1;Parent=gene-LDO50_RS05120;Dbxref=GenBank:WP_063710896.1;Name=WP_063710896.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602073.1;locus_tag=LDO50_RS05120;product=type II secretion system minor pseudopilin GspI;protein_id=WP_063710896.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 6668 6874 . - . ID=gene-LDO50_RS05125;Name=LDO50_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05125;old_locus_tag=BVI1335_1270008 NZ_CAJZAO010000032.1 Protein Homology CDS 6668 6874 . - 0 ID=cds-WP_043292475.1;Parent=gene-LDO50_RS05125;Dbxref=GenBank:WP_043292475.1;Name=WP_043292475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766132.1;locus_tag=LDO50_RS05125;product=hypothetical protein;protein_id=WP_043292475.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 7207 7806 . - . ID=gene-LDO50_RS05130;Name=LDO50_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05130;old_locus_tag=BVI1335_1270009 NZ_CAJZAO010000032.1 Protein Homology CDS 7207 7806 . - 0 ID=cds-WP_175899307.1;Parent=gene-LDO50_RS05130;Dbxref=GenBank:WP_175899307.1;Name=WP_175899307.1;Ontology_term=GO:0003676,GO:0008198,GO:0016706;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ferrous iron binding|0008198||IEA,2-oxoglutarate-dependent dioxygenase activity|0016706||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725302.1;locus_tag=LDO50_RS05130;product=alpha-ketoglutarate-dependent dioxygenase AlkB family protein;protein_id=WP_175899307.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 8068 9216 . - . ID=gene-LDO50_RS05135;Name=LDO50_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05135;old_locus_tag=BVI1335_1270010 NZ_CAJZAO010000032.1 Protein Homology CDS 8068 9216 . - 0 ID=cds-WP_011882530.1;Parent=gene-LDO50_RS05135;Dbxref=GenBank:WP_011882530.1;Name=WP_011882530.1;Ontology_term=GO:0016311,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403202.1;locus_tag=LDO50_RS05135;product=metallophosphoesterase;protein_id=WP_011882530.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 9220 9420 . + . ID=gene-LDO50_RS05140;Name=LDO50_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05140 NZ_CAJZAO010000032.1 GeneMarkS-2+ CDS 9220 9420 . + 0 ID=cds-WP_045577854.1;Parent=gene-LDO50_RS05140;Dbxref=GenBank:WP_045577854.1;Name=WP_045577854.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS05140;product=hypothetical protein;protein_id=WP_045577854.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 9749 10456 . + . ID=gene-LDO50_RS05145;Name=LDO50_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05145;old_locus_tag=BVI1335_1270012 NZ_CAJZAO010000032.1 Protein Homology CDS 9749 10456 . + 0 ID=cds-WP_011882531.1;Parent=gene-LDO50_RS05145;Dbxref=GenBank:WP_011882531.1;Name=WP_011882531.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009897347.1;locus_tag=LDO50_RS05145;product=MgtC/SapB family protein;protein_id=WP_011882531.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 10515 11234 . - . ID=gene-LDO50_RS05150;Name=LDO50_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05150;old_locus_tag=BVI1335_1270013 NZ_CAJZAO010000032.1 Protein Homology CDS 10515 11234 . - 0 ID=cds-WP_011882532.1;Parent=gene-LDO50_RS05150;Dbxref=GenBank:WP_011882532.1;Name=WP_011882532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409826.1;locus_tag=LDO50_RS05150;product=autoinducer binding domain-containing protein;protein_id=WP_011882532.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 11308 11751 . + . ID=gene-LDO50_RS05155;Name=LDO50_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05155;old_locus_tag=BVI1335_1270014 NZ_CAJZAO010000032.1 Protein Homology CDS 11308 11751 . + 0 ID=cds-WP_011882533.1;Parent=gene-LDO50_RS05155;Dbxref=GenBank:WP_011882533.1;Name=WP_011882533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366335.1;locus_tag=LDO50_RS05155;product=DUF4902 domain-containing protein;protein_id=WP_011882533.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 11961 12569 . + . ID=gene-LDO50_RS05160;Name=LDO50_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05160;old_locus_tag=BVI1335_1270015 NZ_CAJZAO010000032.1 Protein Homology CDS 11961 12569 . + 0 ID=cds-WP_059461377.1;Parent=gene-LDO50_RS05160;Dbxref=GenBank:WP_059461377.1;Name=WP_059461377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195479.1;locus_tag=LDO50_RS05160;product=acyl-homoserine-lactone synthase;protein_id=WP_059461377.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 12623 13396 . + . ID=gene-LDO50_RS05165;Name=LDO50_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05165;old_locus_tag=BVI1335_1270016 NZ_CAJZAO010000032.1 Protein Homology CDS 12623 13396 . + 0 ID=cds-WP_014725308.1;Parent=gene-LDO50_RS05165;Dbxref=GenBank:WP_014725308.1;Name=WP_014725308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725308.1;locus_tag=LDO50_RS05165;product=hypothetical protein;protein_id=WP_014725308.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 13617 14486 . - . ID=gene-LDO50_RS05170;Name=LDO50_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05170;old_locus_tag=BVI1335_1270017 NZ_CAJZAO010000032.1 Protein Homology CDS 13617 14486 . - 0 ID=cds-WP_069240339.1;Parent=gene-LDO50_RS05170;Dbxref=GenBank:WP_069240339.1;Name=WP_069240339.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733122.1;locus_tag=LDO50_RS05170;product=ankyrin repeat domain-containing protein;protein_id=WP_069240339.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 14486 14776 . - . ID=gene-LDO50_RS05175;Name=LDO50_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05175;old_locus_tag=BVI1335_1270018 NZ_CAJZAO010000032.1 Protein Homology CDS 14486 14776 . - 0 ID=cds-WP_224019468.1;Parent=gene-LDO50_RS05175;Dbxref=GenBank:WP_224019468.1;Name=WP_224019468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882537.1;locus_tag=LDO50_RS05175;product=VgrG protein;protein_id=WP_224019468.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 14875 15048 . - . ID=gene-LDO50_RS05180;Name=LDO50_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05180;old_locus_tag=BVI1335_1270019 NZ_CAJZAO010000032.1 GeneMarkS-2+ CDS 14875 15048 . - 0 ID=cds-WP_155121977.1;Parent=gene-LDO50_RS05180;Dbxref=GenBank:WP_155121977.1;Name=WP_155121977.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS05180;product=hypothetical protein;protein_id=WP_155121977.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 15065 16147 . - . ID=gene-LDO50_RS05185;Name=LDO50_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05185;old_locus_tag=BVI1335_1270020 NZ_CAJZAO010000032.1 Protein Homology CDS 15065 16147 . - 0 ID=cds-WP_014725312.1;Parent=gene-LDO50_RS05185;Dbxref=GenBank:WP_014725312.1;Name=WP_014725312.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF013884.7;locus_tag=LDO50_RS05185;product=acyltransferase family protein;protein_id=WP_014725312.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 16405 17091 . - . ID=gene-LDO50_RS05190;Name=LDO50_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05190;old_locus_tag=BVI1335_1270021 NZ_CAJZAO010000032.1 GeneMarkS-2+ CDS 16405 17091 . - 0 ID=cds-WP_140994337.1;Parent=gene-LDO50_RS05190;Dbxref=GenBank:WP_140994337.1;Name=WP_140994337.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS05190;product=hypothetical protein;protein_id=WP_140994337.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 17270 17965 . - . ID=gene-LDO50_RS05195;Name=LDO50_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05195;old_locus_tag=BVI1335_1270022 NZ_CAJZAO010000032.1 Protein Homology CDS 17270 17965 . - 0 ID=cds-WP_224019469.1;Parent=gene-LDO50_RS05195;Dbxref=GenBank:WP_224019469.1;Name=WP_224019469.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022072.6;locus_tag=LDO50_RS05195;product=SRPBCC domain-containing protein;protein_id=WP_224019469.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 18009 18923 . - . ID=gene-LDO50_RS05200;Name=LDO50_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05200;old_locus_tag=BVI1335_1270025 NZ_CAJZAO010000032.1 Protein Homology CDS 18009 18923 . - 0 ID=cds-WP_224019470.1;Parent=gene-LDO50_RS05200;Dbxref=GenBank:WP_224019470.1;Name=WP_224019470.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020387.6;locus_tag=LDO50_RS05200;product=RES family NAD+ phosphorylase;protein_id=WP_224019470.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 19230 20018 . - . ID=gene-LDO50_RS05205;Name=LDO50_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05205;old_locus_tag=BVI1335_1270026 NZ_CAJZAO010000032.1 Protein Homology CDS 19230 20018 . - 0 ID=cds-WP_224019471.1;Parent=gene-LDO50_RS05205;Dbxref=GenBank:WP_224019471.1;Name=WP_224019471.1;Ontology_term=GO:0032775,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890252.1;locus_tag=LDO50_RS05205;product=DNA adenine methylase;protein_id=WP_224019471.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 20445 22280 . + . ID=gene-LDO50_RS05210;Name=LDO50_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05210;old_locus_tag=BVI1335_1270027 NZ_CAJZAO010000032.1 Protein Homology CDS 20445 22280 . + 0 ID=cds-WP_443797718.1;Parent=gene-LDO50_RS05210;Dbxref=GenBank:WP_443797718.1;Name=WP_443797718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884311.1;locus_tag=LDO50_RS05210;product=beta-galactosidase;protein_id=WP_443797718.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 22282 22767 . - . ID=gene-LDO50_RS05215;Name=LDO50_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05215;old_locus_tag=BVI1335_1270028 NZ_CAJZAO010000032.1 Protein Homology CDS 22282 22767 . - 0 ID=cds-WP_224019473.1;Parent=gene-LDO50_RS05215;Dbxref=GenBank:WP_224019473.1;Name=WP_224019473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407464.1;locus_tag=LDO50_RS05215;product=DUF2514 family protein;protein_id=WP_224019473.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 22764 23258 . - . ID=gene-LDO50_RS05220;Name=LDO50_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05220;old_locus_tag=BVI1335_1270029 NZ_CAJZAO010000032.1 Protein Homology CDS 22764 23258 . - 0 ID=cds-WP_224019474.1;Parent=gene-LDO50_RS05220;Dbxref=GenBank:WP_224019474.1;Name=WP_224019474.1;Ontology_term=GO:0005975,GO:0003796,GO:0004553;gbkey=CDS;go_function=lysozyme activity|0003796||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410007.1;locus_tag=LDO50_RS05220;product=glycoside hydrolase family 24 protein;protein_id=WP_224019474.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 23261 23545 . - . ID=gene-LDO50_RS05225;Name=LDO50_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05225;old_locus_tag=BVI1335_1270030 NZ_CAJZAO010000032.1 Protein Homology CDS 23261 23545 . - 0 ID=cds-WP_059461369.1;Parent=gene-LDO50_RS05225;Dbxref=GenBank:WP_059461369.1;Name=WP_059461369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408930.1;locus_tag=LDO50_RS05225;product=phage holin family protein;protein_id=WP_059461369.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 23649 24083 . - . ID=gene-LDO50_RS05230;Name=LDO50_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05230;old_locus_tag=BVI1335_1270031 NZ_CAJZAO010000032.1 Protein Homology CDS 23649 24083 . - 0 ID=cds-WP_224019475.1;Parent=gene-LDO50_RS05230;Dbxref=GenBank:WP_224019475.1;Name=WP_224019475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884312.1;locus_tag=LDO50_RS05230;product=XkdW family protein;protein_id=WP_224019475.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 24093 25118 . - . ID=gene-LDO50_RS05235;Name=LDO50_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05235;old_locus_tag=BVI1335_1270032 NZ_CAJZAO010000032.1 Protein Homology CDS 24093 25118 . - 0 ID=cds-WP_176317792.1;Parent=gene-LDO50_RS05235;Dbxref=GenBank:WP_176317792.1;Name=WP_176317792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884313.1;locus_tag=LDO50_RS05235;product=hypothetical protein;protein_id=WP_176317792.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 25121 25720 . - . ID=gene-LDO50_RS05240;Name=LDO50_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05240;old_locus_tag=BVI1335_1270033 NZ_CAJZAO010000032.1 Protein Homology CDS 25121 25720 . - 0 ID=cds-WP_176317793.1;Parent=gene-LDO50_RS05240;Dbxref=GenBank:WP_176317793.1;Name=WP_176317793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017452170.1;locus_tag=LDO50_RS05240;product=YmfQ family protein;protein_id=WP_176317793.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 25711 26757 . - . ID=gene-LDO50_RS05245;Name=LDO50_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05245;old_locus_tag=BVI1335_1270034 NZ_CAJZAO010000032.1 Protein Homology CDS 25711 26757 . - 0 ID=cds-WP_176317794.1;Parent=gene-LDO50_RS05245;Dbxref=GenBank:WP_176317794.1;Name=WP_176317794.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016736.6;locus_tag=LDO50_RS05245;product=baseplate J/gp47 family protein;protein_id=WP_176317794.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 26729 27157 . - . ID=gene-LDO50_RS05250;Name=LDO50_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05250;old_locus_tag=BVI1335_1270035 NZ_CAJZAO010000032.1 Protein Homology CDS 26729 27157 . - 0 ID=cds-WP_176317795.1;Parent=gene-LDO50_RS05250;Dbxref=GenBank:WP_176317795.1;Name=WP_176317795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017452168.1;locus_tag=LDO50_RS05250;product=phage GP46 family protein;protein_id=WP_176317795.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 27154 27732 . - . ID=gene-LDO50_RS05255;Name=LDO50_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05255;old_locus_tag=BVI1335_1270036 NZ_CAJZAO010000032.1 Protein Homology CDS 27154 27732 . - 0 ID=cds-WP_176317796.1;Parent=gene-LDO50_RS05255;Dbxref=GenBank:WP_176317796.1;Name=WP_176317796.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: protein motif:HMM:TIGR01644.1;locus_tag=LDO50_RS05255;product=phage baseplate assembly protein V;protein_id=WP_176317796.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 27729 28844 . - . ID=gene-LDO50_RS05260;Name=LDO50_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05260;old_locus_tag=BVI1335_1270037 NZ_CAJZAO010000032.1 Protein Homology CDS 27729 28844 . - 0 ID=cds-WP_176317797.1;Parent=gene-LDO50_RS05260;Dbxref=GenBank:WP_176317797.1;Name=WP_176317797.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF044847.3;locus_tag=LDO50_RS05260;product=phage baseplate assembly protein;protein_id=WP_176317797.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 28845 30083 . - . ID=gene-LDO50_RS05265;Name=LDO50_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05265;old_locus_tag=BVI1335_1270038 NZ_CAJZAO010000032.1 Protein Homology CDS 28845 30083 . - 0 ID=cds-WP_176317798.1;Parent=gene-LDO50_RS05265;Dbxref=GenBank:WP_176317798.1;Name=WP_176317798.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018818.6;locus_tag=LDO50_RS05265;product=DNA circularization protein;protein_id=WP_176317798.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 30091 32028 . - . ID=gene-LDO50_RS05270;Name=LDO50_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05270;old_locus_tag=BVI1335_1270039 NZ_CAJZAO010000032.1 Protein Homology CDS 30091 32028 . - 0 ID=cds-WP_224019476.1;Parent=gene-LDO50_RS05270;Dbxref=GenBank:WP_224019476.1;Name=WP_224019476.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017452164.1;locus_tag=LDO50_RS05270;product=phage tail tape measure protein;protein_id=WP_224019476.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 32162 32452 . - . ID=gene-LDO50_RS05275;Name=LDO50_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05275;old_locus_tag=BVI1335_1270041 NZ_CAJZAO010000032.1 Protein Homology CDS 32162 32452 . - 0 ID=cds-WP_196483678.1;Parent=gene-LDO50_RS05275;Dbxref=GenBank:WP_196483678.1;Name=WP_196483678.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: protein motif:HMM:NF021614.6;locus_tag=LDO50_RS05275;product=phage tail assembly protein;protein_id=WP_196483678.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 32449 32796 . - . ID=gene-LDO50_RS05280;Name=LDO50_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05280;old_locus_tag=BVI1335_1270042 NZ_CAJZAO010000032.1 Protein Homology CDS 32449 32796 . - 0 ID=cds-WP_059461358.1;Parent=gene-LDO50_RS05280;Dbxref=GenBank:WP_059461358.1;Name=WP_059461358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017452162.1;locus_tag=LDO50_RS05280;product=phage tail tube protein;protein_id=WP_059461358.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 32866 34146 . - . ID=gene-LDO50_RS05285;Name=LDO50_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05285;old_locus_tag=BVI1335_1270043 NZ_CAJZAO010000032.1 Protein Homology CDS 32866 34146 . - 0 ID=cds-WP_224019477.1;Parent=gene-LDO50_RS05285;Dbxref=GenBank:WP_224019477.1;Name=WP_224019477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017454746.1;locus_tag=LDO50_RS05285;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_224019477.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 34136 34315 . + . ID=gene-LDO50_RS05290;Name=LDO50_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05290 NZ_CAJZAO010000032.1 GeneMarkS-2+ CDS 34136 34315 . + 0 ID=cds-WP_224019478.1;Parent=gene-LDO50_RS05290;Dbxref=GenBank:WP_224019478.1;Name=WP_224019478.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS05290;product=hypothetical protein;protein_id=WP_224019478.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 34359 34616 . - . ID=gene-LDO50_RS05295;Name=LDO50_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05295;old_locus_tag=BVI1335_1270044 NZ_CAJZAO010000032.1 Protein Homology CDS 34359 34616 . - 0 ID=cds-WP_224019479.1;Parent=gene-LDO50_RS05295;Dbxref=GenBank:WP_224019479.1;Name=WP_224019479.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022401.6;locus_tag=LDO50_RS05295;product=DUF2635 domain-containing protein;protein_id=WP_224019479.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 34613 35203 . - . ID=gene-LDO50_RS05300;Name=LDO50_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05300;old_locus_tag=BVI1335_1270045 NZ_CAJZAO010000032.1 Protein Homology CDS 34613 35203 . - 0 ID=cds-WP_059461356.1;Parent=gene-LDO50_RS05300;Dbxref=GenBank:WP_059461356.1;Name=WP_059461356.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048220.1;locus_tag=LDO50_RS05300;product=phage tail terminator protein;protein_id=WP_059461356.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 35211 35681 . - . ID=gene-LDO50_RS05305;Name=LDO50_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05305;old_locus_tag=BVI1335_1270046 NZ_CAJZAO010000032.1 Protein Homology CDS 35211 35681 . - 0 ID=cds-WP_224019480.1;Parent=gene-LDO50_RS05305;Dbxref=GenBank:WP_224019480.1;Name=WP_224019480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017452158.1;locus_tag=LDO50_RS05305;product=hypothetical protein;protein_id=WP_224019480.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 35671 36006 . - . ID=gene-LDO50_RS05310;Name=LDO50_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05310;old_locus_tag=BVI1335_1270047 NZ_CAJZAO010000032.1 Protein Homology CDS 35671 36006 . - 0 ID=cds-WP_059461354.1;Parent=gene-LDO50_RS05310;Dbxref=GenBank:WP_059461354.1;Name=WP_059461354.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017452157.1;locus_tag=LDO50_RS05310;product=phage head closure protein;protein_id=WP_059461354.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 36006 36569 . - . ID=gene-LDO50_RS05315;Name=LDO50_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05315;old_locus_tag=BVI1335_1270048 NZ_CAJZAO010000032.1 Protein Homology CDS 36006 36569 . - 0 ID=cds-WP_059461353.1;Parent=gene-LDO50_RS05315;Dbxref=GenBank:WP_059461353.1;Name=WP_059461353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010121294.1;locus_tag=LDO50_RS05315;product=hypothetical protein;protein_id=WP_059461353.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 36576 36761 . - . ID=gene-LDO50_RS05320;Name=LDO50_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05320;old_locus_tag=BVI1335_1270049 NZ_CAJZAO010000032.1 Protein Homology CDS 36576 36761 . - 0 ID=cds-WP_224019481.1;Parent=gene-LDO50_RS05320;Dbxref=GenBank:WP_224019481.1;Name=WP_224019481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899211.1;locus_tag=LDO50_RS05320;product=hypothetical protein;protein_id=WP_224019481.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 36817 38124 . - . ID=gene-LDO50_RS05325;Name=LDO50_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05325;old_locus_tag=BVI1335_1270050 NZ_CAJZAO010000032.1 Protein Homology CDS 36817 38124 . - 0 ID=cds-WP_224019482.1;Parent=gene-LDO50_RS05325;Dbxref=GenBank:WP_224019482.1;Name=WP_224019482.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015967352.1;locus_tag=LDO50_RS05325;product=phage major capsid protein;protein_id=WP_224019482.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 38229 39197 . - . ID=gene-LDO50_RS05330;Name=LDO50_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05330;old_locus_tag=BVI1335_1270052 NZ_CAJZAO010000032.1 Protein Homology CDS 38229 39197 . - 0 ID=cds-WP_224019483.1;Parent=gene-LDO50_RS05330;Dbxref=GenBank:WP_224019483.1;Name=WP_224019483.1;Ontology_term=GO:0006508,GO:0008233,GO:0008236;gbkey=CDS;go_function=peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010121298.1;locus_tag=LDO50_RS05330;product=S49 family peptidase;protein_id=WP_224019483.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 39194 40453 . - . ID=gene-LDO50_RS05335;Name=LDO50_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05335;old_locus_tag=BVI1335_1270053 NZ_CAJZAO010000032.1 Protein Homology CDS 39194 40453 . - 0 ID=cds-WP_059461349.1;Parent=gene-LDO50_RS05335;Dbxref=GenBank:WP_059461349.1;Name=WP_059461349.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899208.1;locus_tag=LDO50_RS05335;product=phage portal protein;protein_id=WP_059461349.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 40458 40643 . - . ID=gene-LDO50_RS05340;Name=LDO50_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05340;old_locus_tag=BVI1335_1270054 NZ_CAJZAO010000032.1 Protein Homology CDS 40458 40643 . - 0 ID=cds-WP_059461348.1;Parent=gene-LDO50_RS05340;Dbxref=GenBank:WP_059461348.1;Name=WP_059461348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899207.1;locus_tag=LDO50_RS05340;product=hypothetical protein;protein_id=WP_059461348.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 40640 42355 . - . ID=gene-LDO50_RS05345;Name=LDO50_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05345;old_locus_tag=BVI1335_1270055 NZ_CAJZAO010000032.1 Protein Homology CDS 40640 42355 . - 0 ID=cds-WP_059461347.1;Parent=gene-LDO50_RS05345;Dbxref=GenBank:WP_059461347.1;Name=WP_059461347.1;Ontology_term=GO:0004519,GO:0005524,GO:0140657;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP-dependent activity|0140657||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015984960.1;locus_tag=LDO50_RS05345;product=terminase large subunit;protein_id=WP_059461347.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 42359 42835 . - . ID=gene-LDO50_RS05350;Name=LDO50_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05350;old_locus_tag=BVI1335_1270056 NZ_CAJZAO010000032.1 Protein Homology CDS 42359 42835 . - 0 ID=cds-WP_059461346.1;Parent=gene-LDO50_RS05350;Dbxref=GenBank:WP_059461346.1;Name=WP_059461346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004549538.1;locus_tag=LDO50_RS05350;product=phage terminase small subunit P27 family;protein_id=WP_059461346.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 43001 43357 . - . ID=gene-LDO50_RS05355;Name=LDO50_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05355 NZ_CAJZAO010000032.1 Protein Homology CDS 43001 43357 . - 0 ID=cds-WP_081055575.1;Parent=gene-LDO50_RS05355;Dbxref=GenBank:WP_081055575.1;Name=WP_081055575.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: protein motif:HMM:NF013964.6;locus_tag=LDO50_RS05355;product=HNH endonuclease;protein_id=WP_081055575.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 43505 43804 . - . ID=gene-LDO50_RS05360;Name=LDO50_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05360;old_locus_tag=BVI1335_1270058 NZ_CAJZAO010000032.1 Protein Homology CDS 43505 43804 . - 0 ID=cds-WP_059461408.1;Parent=gene-LDO50_RS05360;Dbxref=GenBank:WP_059461408.1;Name=WP_059461408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481154.1;locus_tag=LDO50_RS05360;product=H-NS histone family protein;protein_id=WP_059461408.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 44037 44624 . - . ID=gene-LDO50_RS05365;Name=LDO50_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05365 NZ_CAJZAO010000032.1 GeneMarkS-2+ CDS 44037 44624 . - 0 ID=cds-WP_224019484.1;Parent=gene-LDO50_RS05365;Dbxref=GenBank:WP_224019484.1;Name=WP_224019484.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS05365;product=hypothetical protein;protein_id=WP_224019484.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 44808 45491 . - . ID=gene-LDO50_RS05370;Name=LDO50_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05370;old_locus_tag=BVI1335_1270061 NZ_CAJZAO010000032.1 GeneMarkS-2+ CDS 44808 45491 . - 0 ID=cds-WP_224019485.1;Parent=gene-LDO50_RS05370;Dbxref=GenBank:WP_224019485.1;Name=WP_224019485.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS05370;product=hypothetical protein;protein_id=WP_224019485.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 45475 46971 . - . ID=gene-LDO50_RS05375;Name=LDO50_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05375;old_locus_tag=BVI1335_1270062 NZ_CAJZAO010000032.1 Protein Homology CDS 45475 46971 . - 0 ID=cds-WP_224019486.1;Parent=gene-LDO50_RS05375;Dbxref=GenBank:WP_224019486.1;Name=WP_224019486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012427944.1;locus_tag=LDO50_RS05375;product=N-acetylmuramidase family protein;protein_id=WP_224019486.1;transl_table=11 NZ_CAJZAO010000032.1 RefSeq gene 47015 49915 . - . ID=gene-LDO50_RS05380;Name=LDO50_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05380;old_locus_tag=BVI1335_1270063 NZ_CAJZAO010000032.1 Protein Homology CDS 47015 49915 . - 0 ID=cds-WP_081055573.1;Parent=gene-LDO50_RS05380;Dbxref=GenBank:WP_081055573.1;Name=WP_081055573.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:TIGR03361.1;locus_tag=LDO50_RS05380;product=type VI secretion system Vgr family protein;protein_id=WP_081055573.1;transl_table=11 ##sequence-region NZ_CAJZAO010000033.1 1 7147 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000033.1 RefSeq region 1 7147 . + . ID=NZ_CAJZAO010000033.1:1..7147;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_128 NZ_CAJZAO010000033.1 RefSeq gene 1 259 . - . ID=gene-LDO50_RS31290;Name=LDO50_RS31290;end_range=259,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31290;partial=true;start_range=.,1 NZ_CAJZAO010000033.1 Protein Homology CDS 1 259 . - 1 ID=cds-WP_443797719.1;Parent=gene-LDO50_RS31290;Dbxref=GenBank:WP_443797719.1;Name=WP_443797719.1;Ontology_term=GO:0009236,GO:0048472,GO:0016020;end_range=259,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526314.1;locus_tag=LDO50_RS31290;partial=true;product=cobalamin biosynthesis protein;protein_id=WP_443797719.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000033.1 RefSeq gene 270 632 . - . ID=gene-LDO50_RS31295;Name=LDO50_RS31295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31295;partial=true;start_range=.,270 NZ_CAJZAO010000033.1 Protein Homology CDS 270 632 . - 0 ID=cds-WP_443797720.1;Parent=gene-LDO50_RS31295;Dbxref=GenBank:WP_443797720.1;Name=WP_443797720.1;Ontology_term=GO:0009236,GO:0048472,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526314.1;locus_tag=LDO50_RS31295;partial=true;product=cobalamin biosynthesis protein;protein_id=WP_443797720.1;start_range=.,270;transl_table=11 NZ_CAJZAO010000033.1 RefSeq gene 626 1186 . - . ID=gene-LDO50_RS05390;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=LDO50_RS05390;old_locus_tag=BVI1335_1280003 NZ_CAJZAO010000033.1 Protein Homology CDS 626 1186 . - 0 ID=cds-WP_059567054.1;Parent=gene-LDO50_RS05390;Dbxref=GenBank:WP_059567054.1;Name=WP_059567054.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364467.1;locus_tag=LDO50_RS05390;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_059567054.1;transl_table=11 NZ_CAJZAO010000033.1 RefSeq gene 1281 2780 . + . ID=gene-LDO50_RS05395;Name=LDO50_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05395;old_locus_tag=BVI1335_1280004 NZ_CAJZAO010000033.1 Protein Homology CDS 1281 2780 . + 0 ID=cds-WP_224019487.1;Parent=gene-LDO50_RS05395;Dbxref=GenBank:WP_224019487.1;Name=WP_224019487.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657662.1;locus_tag=LDO50_RS05395;product=cobyric acid synthase;protein_id=WP_224019487.1;transl_table=11 NZ_CAJZAO010000033.1 RefSeq gene 3053 3454 . + . ID=gene-LDO50_RS05400;Name=LDO50_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05400;old_locus_tag=BVI1335_1280005 NZ_CAJZAO010000033.1 Protein Homology CDS 3053 3454 . + 0 ID=cds-WP_014723466.1;Parent=gene-LDO50_RS05400;Dbxref=GenBank:WP_014723466.1;Name=WP_014723466.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885718.1;locus_tag=LDO50_RS05400;product=DoxX family protein;protein_id=WP_014723466.1;transl_table=11 NZ_CAJZAO010000033.1 RefSeq gene 3593 4252 . + . ID=gene-LDO50_RS05405;Name=LDO50_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05405;old_locus_tag=BVI1335_1280006 NZ_CAJZAO010000033.1 Protein Homology CDS 3593 4252 . + 0 ID=cds-WP_011885717.1;Parent=gene-LDO50_RS05405;Dbxref=GenBank:WP_011885717.1;Name=WP_011885717.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212899.1;locus_tag=LDO50_RS05405;product=ParA family protein;protein_id=WP_011885717.1;transl_table=11 NZ_CAJZAO010000033.1 RefSeq gene 4445 4831 . - . ID=gene-LDO50_RS05410;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=LDO50_RS05410;old_locus_tag=BVI1335_1280007 NZ_CAJZAO010000033.1 Protein Homology CDS 4445 4831 . - 0 ID=cds-WP_011885716.1;Parent=gene-LDO50_RS05410;Dbxref=GenBank:WP_011885716.1;Name=WP_011885716.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006048527.1;locus_tag=LDO50_RS05410;product=aspartate 1-decarboxylase;protein_id=WP_011885716.1;transl_table=11 NZ_CAJZAO010000033.1 RefSeq gene 4868 5707 . - . ID=gene-LDO50_RS05415;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=LDO50_RS05415;old_locus_tag=BVI1335_1280008 NZ_CAJZAO010000033.1 Protein Homology CDS 4868 5707 . - 0 ID=cds-WP_011885715.1;Parent=gene-LDO50_RS05415;Dbxref=GenBank:WP_011885715.1;Name=WP_011885715.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352891.1;locus_tag=LDO50_RS05415;product=pantoate--beta-alanine ligase;protein_id=WP_011885715.1;transl_table=11 NZ_CAJZAO010000033.1 RefSeq gene 5960 6832 . - . ID=gene-LDO50_RS05420;Name=LDO50_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05420;old_locus_tag=BVI1335_1280009 NZ_CAJZAO010000033.1 Protein Homology CDS 5960 6832 . - 0 ID=cds-WP_224019488.1;Parent=gene-LDO50_RS05420;Dbxref=GenBank:WP_224019488.1;Name=WP_224019488.1;Ontology_term=GO:0007059,GO:0051301;gbkey=CDS;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102217.1;locus_tag=LDO50_RS05420;product=segregation and condensation protein A;protein_id=WP_224019488.1;transl_table=11 NZ_CAJZAO010000033.1 RefSeq gene 6837 7025 . - . ID=gene-LDO50_RS05425;Name=LDO50_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05425;old_locus_tag=BVI1335_1280010 NZ_CAJZAO010000033.1 Protein Homology CDS 6837 7025 . - 0 ID=cds-WP_011885713.1;Parent=gene-LDO50_RS05425;Dbxref=GenBank:WP_011885713.1;Name=WP_011885713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333879.1;locus_tag=LDO50_RS05425;product=DUF3460 family protein;protein_id=WP_011885713.1;transl_table=11 ##sequence-region NZ_CAJZAO010000034.1 1 32456 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000034.1 RefSeq region 1 32456 . + . ID=NZ_CAJZAO010000034.1:1..32456;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_129 NZ_CAJZAO010000034.1 RefSeq gene 1 1245 . + . ID=gene-LDO50_RS05430;Name=LDO50_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05430;old_locus_tag=BVI1335_1290001;partial=true;start_range=.,1 NZ_CAJZAO010000034.1 Protein Homology CDS 1 1245 . + 0 ID=cds-WP_224019490.1;Parent=gene-LDO50_RS05430;Dbxref=GenBank:WP_224019490.1;Name=WP_224019490.1;Ontology_term=GO:0001510,GO:0008757,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333399.1;locus_tag=LDO50_RS05430;partial=true;product=THUMP domain-containing class I SAM-dependent RNA methyltransferase;protein_id=WP_224019490.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 1536 1952 . + . ID=gene-LDO50_RS05435;Name=LDO50_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05435;old_locus_tag=BVI1335_1290002 NZ_CAJZAO010000034.1 Protein Homology CDS 1536 1952 . + 0 ID=cds-WP_011883304.1;Parent=gene-LDO50_RS05435;Dbxref=GenBank:WP_011883304.1;Name=WP_011883304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751908.1;locus_tag=LDO50_RS05435;product=VOC family protein;protein_id=WP_011883304.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 2026 2712 . + . ID=gene-LDO50_RS05440;Name=LDO50_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05440;old_locus_tag=BVI1335_1290003 NZ_CAJZAO010000034.1 Protein Homology CDS 2026 2712 . + 0 ID=cds-WP_011883303.1;Parent=gene-LDO50_RS05440;Dbxref=GenBank:WP_011883303.1;Name=WP_011883303.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722459.1;locus_tag=LDO50_RS05440;product=helix-turn-helix transcriptional regulator;protein_id=WP_011883303.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 2901 3824 . - . ID=gene-LDO50_RS05445;Name=LDO50_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05445;old_locus_tag=BVI1335_1290005 NZ_CAJZAO010000034.1 Protein Homology CDS 2901 3824 . - 0 ID=cds-WP_011883302.1;Parent=gene-LDO50_RS05445;Dbxref=GenBank:WP_011883302.1;Name=WP_011883302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327917.1;locus_tag=LDO50_RS05445;product=carbon-nitrogen hydrolase family protein;protein_id=WP_011883302.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 3933 4108 . + . ID=gene-LDO50_RS31300;Name=LDO50_RS31300;end_range=4108,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31300;old_locus_tag=BVI1335_1290006;partial=true NZ_CAJZAO010000034.1 Protein Homology CDS 3933 4108 . + 0 ID=cds-WP_443797723.1;Parent=gene-LDO50_RS31300;Dbxref=GenBank:WP_443797723.1;Name=WP_443797723.1;Ontology_term=GO:0006355,GO:0003700;end_range=4108,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898055.1;locus_tag=LDO50_RS31300;partial=true;product=LysR family transcriptional regulator;protein_id=WP_443797723.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 4119 4694 . + . ID=gene-LDO50_RS05450;Name=LDO50_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05450;old_locus_tag=BVI1335_1290007;partial=true;start_range=.,4119 NZ_CAJZAO010000034.1 Protein Homology CDS 4119 4694 . + 0 ID=cds-WP_443797721.1;Parent=gene-LDO50_RS05450;Dbxref=GenBank:WP_443797721.1;Name=WP_443797721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722457.1;locus_tag=LDO50_RS05450;partial=true;product=LysR substrate-binding domain-containing protein;protein_id=WP_443797721.1;start_range=.,4119;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 4801 5310 . + . ID=gene-LDO50_RS05455;Name=LDO50_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05455;old_locus_tag=BVI1335_1290009 NZ_CAJZAO010000034.1 Protein Homology CDS 4801 5310 . + 0 ID=cds-WP_011883300.1;Parent=gene-LDO50_RS05455;Dbxref=GenBank:WP_011883300.1;Name=WP_011883300.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194031.1;locus_tag=LDO50_RS05455;product=NUDIX hydrolase;protein_id=WP_011883300.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 5307 6461 . + . ID=gene-LDO50_RS05460;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=LDO50_RS05460;old_locus_tag=BVI1335_1290008 NZ_CAJZAO010000034.1 Protein Homology CDS 5307 6461 . + 0 ID=cds-WP_034194435.1;Parent=gene-LDO50_RS05460;Dbxref=GenBank:WP_034194435.1;Name=WP_034194435.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492953.1;locus_tag=LDO50_RS05460;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_034194435.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 6577 8196 . + . ID=gene-LDO50_RS05465;Name=LDO50_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05465;old_locus_tag=BVI1335_1290011 NZ_CAJZAO010000034.1 Protein Homology CDS 6577 8196 . + 0 ID=cds-WP_014722456.1;Parent=gene-LDO50_RS05465;Dbxref=GenBank:WP_014722456.1;Name=WP_014722456.1;Ontology_term=GO:0006537,GO:0015930,GO:0016638;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;go_process=glutamate biosynthetic process|0006537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327911.1;locus_tag=LDO50_RS05465;product=FMN-binding glutamate synthase family protein;protein_id=WP_014722456.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 8320 8934 . - . ID=gene-LDO50_RS05470;Name=LDO50_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05470;old_locus_tag=BVI1335_1290012 NZ_CAJZAO010000034.1 Protein Homology CDS 8320 8934 . - 0 ID=cds-WP_034194433.1;Parent=gene-LDO50_RS05470;Dbxref=GenBank:WP_034194433.1;Name=WP_034194433.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214107.1;locus_tag=LDO50_RS05470;product=glutathione S-transferase family protein;protein_id=WP_034194433.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 9107 10504 . + . ID=gene-LDO50_RS05475;Name=LDO50_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05475;old_locus_tag=BVI1335_1290013 NZ_CAJZAO010000034.1 Protein Homology CDS 9107 10504 . + 0 ID=cds-WP_014722455.1;Parent=gene-LDO50_RS05475;Dbxref=GenBank:WP_014722455.1;Name=WP_014722455.1;Ontology_term=GO:0030145,GO:0070006;gbkey=CDS;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722455.1;locus_tag=LDO50_RS05475;product=aminopeptidase P N-terminal domain-containing protein;protein_id=WP_014722455.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 10645 11832 . + . ID=gene-LDO50_RS05480;Name=LDO50_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05480;old_locus_tag=BVI1335_1290014 NZ_CAJZAO010000034.1 Protein Homology CDS 10645 11832 . + 0 ID=cds-WP_224019494.1;Parent=gene-LDO50_RS05480;Dbxref=GenBank:WP_224019494.1;Name=WP_224019494.1;Ontology_term=GO:0006744,GO:0016705,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350968.1;locus_tag=LDO50_RS05480;product=UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase;protein_id=WP_224019494.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 11978 12221 . - . ID=gene-LDO50_RS31305;Name=LDO50_RS31305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31305;partial=true;start_range=.,11978 NZ_CAJZAO010000034.1 GeneMarkS-2+ CDS 11978 12221 . - 0 ID=cds-WP_443797722.1;Parent=gene-LDO50_RS31305;Dbxref=GenBank:WP_443797722.1;Name=WP_443797722.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS31305;partial=true;product=hypothetical protein;protein_id=WP_443797722.1;start_range=.,11978;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 12201 13268 . + . ID=gene-LDO50_RS05485;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=LDO50_RS05485;old_locus_tag=BVI1335_1290015 NZ_CAJZAO010000034.1 Protein Homology CDS 12201 13268 . + 0 ID=cds-WP_059474742.1;Parent=gene-LDO50_RS05485;Dbxref=GenBank:WP_059474742.1;Name=WP_059474742.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401674.1;locus_tag=LDO50_RS05485;product=tRNA dihydrouridine synthase DusB;protein_id=WP_059474742.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 13265 13498 . + . ID=gene-LDO50_RS05490;Name=LDO50_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05490;old_locus_tag=BVI1335_1290016 NZ_CAJZAO010000034.1 Protein Homology CDS 13265 13498 . + 0 ID=cds-WP_006476892.1;Parent=gene-LDO50_RS05490;Dbxref=GenBank:WP_006476892.1;Name=WP_006476892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013436270.1;locus_tag=LDO50_RS05490;product=Fis family transcriptional regulator;protein_id=WP_006476892.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 13543 15108 . + . ID=gene-LDO50_RS05495;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=LDO50_RS05495;old_locus_tag=BVI1335_1290017 NZ_CAJZAO010000034.1 Protein Homology CDS 13543 15108 . + 0 ID=cds-WP_014722454.1;Parent=gene-LDO50_RS05495;Dbxref=GenBank:WP_014722454.1;Name=WP_014722454.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069295.1;locus_tag=LDO50_RS05495;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_014722454.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 15260 15802 . + . ID=gene-LDO50_RS05500;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=LDO50_RS05500;old_locus_tag=BVI1335_1290018 NZ_CAJZAO010000034.1 Protein Homology CDS 15260 15802 . + 0 ID=cds-WP_011883292.1;Parent=gene-LDO50_RS05500;Dbxref=GenBank:WP_011883292.1;Name=WP_011883292.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401929.1;locus_tag=LDO50_RS05500;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_011883292.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 16020 16601 . + . ID=gene-LDO50_RS05505;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=LDO50_RS05505;old_locus_tag=BVI1335_1290019 NZ_CAJZAO010000034.1 Protein Homology CDS 16020 16601 . + 0 ID=cds-WP_011883291.1;Parent=gene-LDO50_RS05505;Dbxref=GenBank:WP_011883291.1;Name=WP_011883291.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069298.1;locus_tag=LDO50_RS05505;product=Holliday junction branch migration protein RuvA;protein_id=WP_011883291.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 16723 17790 . + . ID=gene-LDO50_RS05510;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=LDO50_RS05510;old_locus_tag=BVI1335_1290020 NZ_CAJZAO010000034.1 Protein Homology CDS 16723 17790 . + 0 ID=cds-WP_011883290.1;Parent=gene-LDO50_RS05510;Dbxref=GenBank:WP_011883290.1;Name=WP_011883290.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883290.1;locus_tag=LDO50_RS05510;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_011883290.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 17820 18773 . + . ID=gene-LDO50_RS05515;Name=LDO50_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05515;old_locus_tag=BVI1335_1290021 NZ_CAJZAO010000034.1 Protein Homology CDS 17820 18773 . + 0 ID=cds-WP_059463858.1;Parent=gene-LDO50_RS05515;Dbxref=GenBank:WP_059463858.1;Name=WP_059463858.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350962.1;locus_tag=LDO50_RS05515;product=oxygenase MpaB family protein;protein_id=WP_059463858.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 18868 19530 . - . ID=gene-LDO50_RS05520;Name=LDO50_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05520;old_locus_tag=BVI1335_1290022 NZ_CAJZAO010000034.1 Protein Homology CDS 18868 19530 . - 0 ID=cds-WP_046425597.1;Parent=gene-LDO50_RS05520;Dbxref=GenBank:WP_046425597.1;Name=WP_046425597.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009903982.1;locus_tag=LDO50_RS05520;product=histidine phosphatase family protein;protein_id=WP_046425597.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 19554 20012 . - . ID=gene-LDO50_RS05525;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=LDO50_RS05525;old_locus_tag=BVI1335_1290023 NZ_CAJZAO010000034.1 Protein Homology CDS 19554 20012 . - 0 ID=cds-WP_034194152.1;Parent=gene-LDO50_RS05525;Dbxref=GenBank:WP_034194152.1;Name=WP_034194152.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091359.1;locus_tag=LDO50_RS05525;product=D-aminoacyl-tRNA deacylase;protein_id=WP_034194152.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 20009 21250 . - . ID=gene-LDO50_RS05530;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=LDO50_RS05530;old_locus_tag=BVI1335_1290024 NZ_CAJZAO010000034.1 Protein Homology CDS 20009 21250 . - 0 ID=cds-WP_011883286.1;Parent=gene-LDO50_RS05530;Dbxref=GenBank:WP_011883286.1;Name=WP_011883286.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350958.1;locus_tag=LDO50_RS05530;product=tyrosine--tRNA ligase;protein_id=WP_011883286.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq pseudogene 21432 22541 . + . ID=gene-LDO50_RS05535;Name=LDO50_RS05535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS05535;old_locus_tag=BVI1335_1290025;partial=true;pseudo=true;start_range=.,21432 NZ_CAJZAO010000034.1 Protein Homology CDS 21432 22541 . + 0 ID=cds-LDO50_RS05535;Parent=gene-LDO50_RS05535;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015647.6;locus_tag=LDO50_RS05535;partial=true;product=anhydro-N-acetylmuramic acid kinase;pseudo=true;start_range=.,21432;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 22632 23003 . - . ID=gene-LDO50_RS05540;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=LDO50_RS05540;old_locus_tag=BVI1335_1290026 NZ_CAJZAO010000034.1 Protein Homology CDS 22632 23003 . - 0 ID=cds-WP_011883284.1;Parent=gene-LDO50_RS05540;Dbxref=GenBank:WP_011883284.1;Name=WP_011883284.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600516.1;locus_tag=LDO50_RS05540;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_011883284.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 23211 23603 . - . ID=gene-LDO50_RS05545;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=LDO50_RS05545;old_locus_tag=BVI1335_1290027 NZ_CAJZAO010000034.1 Protein Homology CDS 23211 23603 . - 0 ID=cds-WP_011883283.1;Parent=gene-LDO50_RS05545;Dbxref=GenBank:WP_011883283.1;Name=WP_011883283.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019447061.1;locus_tag=LDO50_RS05545;product=30S ribosomal protein S9;protein_id=WP_011883283.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 23615 24043 . - . ID=gene-LDO50_RS05550;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=LDO50_RS05550;old_locus_tag=BVI1335_1290028 NZ_CAJZAO010000034.1 Protein Homology CDS 23615 24043 . - 0 ID=cds-WP_009687896.1;Parent=gene-LDO50_RS05550;Dbxref=GenBank:WP_009687896.1;Name=WP_009687896.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008919631.1;locus_tag=LDO50_RS05550;product=50S ribosomal protein L13;protein_id=WP_009687896.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 24355 24660 . + . ID=gene-LDO50_RS05555;Name=LDO50_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05555 NZ_CAJZAO010000034.1 Protein Homology CDS 24355 24660 . + 0 ID=cds-WP_011883282.1;Parent=gene-LDO50_RS05555;Dbxref=GenBank:WP_011883282.1;Name=WP_011883282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883282.1;locus_tag=LDO50_RS05555;product=DUF1090 family protein;protein_id=WP_011883282.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 25231 25695 . + . ID=gene-LDO50_RS05560;Name=LDO50_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05560;old_locus_tag=BVI1335_1290032 NZ_CAJZAO010000034.1 Protein Homology CDS 25231 25695 . + 0 ID=cds-WP_081054147.1;Parent=gene-LDO50_RS05560;Dbxref=GenBank:WP_081054147.1;Name=WP_081054147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194160.1;locus_tag=LDO50_RS05560;product=OsmC family protein;protein_id=WP_081054147.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 25764 26175 . - . ID=gene-LDO50_RS05565;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=LDO50_RS05565;old_locus_tag=BVI1335_MISCRNA36 NZ_CAJZAO010000034.1 cmsearch RNase_P_RNA 25764 26175 . - . ID=rna-LDO50_RS05565;Parent=gene-LDO50_RS05565;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO50_RS05565;product=RNase P RNA component class A NZ_CAJZAO010000034.1 cmsearch exon 25764 26175 . - . ID=exon-LDO50_RS05565-1;Parent=rna-LDO50_RS05565;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO50_RS05565;product=RNase P RNA component class A NZ_CAJZAO010000034.1 RefSeq gene 26188 27069 . - . ID=gene-LDO50_RS05570;Name=LDO50_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05570;old_locus_tag=BVI1335_1290035 NZ_CAJZAO010000034.1 Protein Homology CDS 26188 27069 . - 0 ID=cds-WP_176300755.1;Parent=gene-LDO50_RS05570;Dbxref=GenBank:WP_176300755.1;Name=WP_176300755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214114.1;locus_tag=LDO50_RS05570;product=DUF3025 domain-containing protein;protein_id=WP_176300755.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 27066 28130 . - . ID=gene-LDO50_RS05575;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=LDO50_RS05575;old_locus_tag=BVI1335_1290036 NZ_CAJZAO010000034.1 Protein Homology CDS 27066 28130 . - 0 ID=cds-WP_034194154.1;Parent=gene-LDO50_RS05575;Dbxref=GenBank:WP_034194154.1;Name=WP_034194154.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333371.1;locus_tag=LDO50_RS05575;product=dihydroorotase;protein_id=WP_034194154.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 28340 29251 . + . ID=gene-LDO50_RS05580;Name=LDO50_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05580;old_locus_tag=BVI1335_1290038 NZ_CAJZAO010000034.1 Protein Homology CDS 28340 29251 . + 0 ID=cds-WP_059694012.1;Parent=gene-LDO50_RS05580;Dbxref=GenBank:WP_059694012.1;Name=WP_059694012.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255597.1;locus_tag=LDO50_RS05580;product=class II glutamine amidotransferase;protein_id=WP_059694012.1;transl_table=11 NZ_CAJZAO010000034.1 RefSeq gene 29879 32456 . + . ID=gene-LDO50_RS05585;Name=LDO50_RS05585;end_range=32456,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05585;partial=true NZ_CAJZAO010000034.1 Protein Homology CDS 29879 32456 . + 0 ID=cds-WP_224019496.1;Parent=gene-LDO50_RS05585;Dbxref=GenBank:WP_224019496.1;Name=WP_224019496.1;end_range=32456,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883278.1;locus_tag=LDO50_RS05585;partial=true;product=ESPR domain-containing protein;protein_id=WP_224019496.1;transl_table=11 ##sequence-region NZ_CAJZAO010000035.1 1 34263 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000035.1 RefSeq region 1 34263 . + . ID=NZ_CAJZAO010000035.1:1..34263;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_13 NZ_CAJZAO010000035.1 RefSeq gene 1 1084 . - . ID=gene-LDO50_RS05590;Name=LDO50_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05590;partial=true;start_range=.,1 NZ_CAJZAO010000035.1 Protein Homology CDS 1 1084 . - 0 ID=cds-WP_372586080.1;Parent=gene-LDO50_RS05590;Dbxref=GenBank:WP_372586080.1;Name=WP_372586080.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611775.1;locus_tag=LDO50_RS05590;partial=true;product=IS256 family transposase;protein_id=WP_372586080.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq pseudogene 1227 1292 . - . ID=gene-LDO50_RS31045;Name=LDO50_RS31045;end_range=1292,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31045;partial=true;pseudo=true;start_range=.,1227 NZ_CAJZAO010000035.1 Protein Homology CDS 1227 1292 . - 0 ID=cds-LDO50_RS31045;Parent=gene-LDO50_RS31045;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1292,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212597.1;locus_tag=LDO50_RS31045;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,1227;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 1332 1661 . - . ID=gene-LDO50_RS05600;Name=LDO50_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05600;old_locus_tag=BVI1335_130003 NZ_CAJZAO010000035.1 Protein Homology CDS 1332 1661 . - 0 ID=cds-WP_011883097.1;Parent=gene-LDO50_RS05600;Dbxref=GenBank:WP_011883097.1;Name=WP_011883097.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049362.1;locus_tag=LDO50_RS05600;product=DUF7716 domain-containing protein;protein_id=WP_011883097.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq pseudogene 1661 2206 . - . ID=gene-LDO50_RS05605;Name=LDO50_RS05605;end_range=2206,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS05605;old_locus_tag=BVI1335_130004;partial=true;pseudo=true NZ_CAJZAO010000035.1 Protein Homology CDS 1661 2206 . - 0 ID=cds-LDO50_RS05605;Parent=gene-LDO50_RS05605;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2206,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883096.1;locus_tag=LDO50_RS05605;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 2202 2627 . - . ID=gene-LDO50_RS05610;Name=LDO50_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05610;old_locus_tag=BVI1335_130005 NZ_CAJZAO010000035.1 Protein Homology CDS 2202 2627 . - 0 ID=cds-WP_059460809.1;Parent=gene-LDO50_RS05610;Dbxref=GenBank:WP_059460809.1;Name=WP_059460809.1;Ontology_term=GO:0042546;gbkey=CDS;go_process=cell wall biogenesis|0042546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697675.1;locus_tag=LDO50_RS05610;product=SMI1/KNR4 family protein;protein_id=WP_059460809.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 2624 7243 . - . ID=gene-LDO50_RS05615;Name=LDO50_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05615;old_locus_tag=BVI1335_130006 NZ_CAJZAO010000035.1 Protein Homology CDS 2624 7243 . - 0 ID=cds-WP_224019501.1;Parent=gene-LDO50_RS05615;Dbxref=GenBank:WP_224019501.1;Name=WP_224019501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480522.1;locus_tag=LDO50_RS05615;product=RHS repeat-associated core domain-containing protein;protein_id=WP_224019501.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 7294 10473 . - . ID=gene-LDO50_RS05620;Name=LDO50_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05620;old_locus_tag=BVI1335_130007 NZ_CAJZAO010000035.1 Protein Homology CDS 7294 10473 . - 0 ID=cds-WP_043290747.1;Parent=gene-LDO50_RS05620;Dbxref=GenBank:WP_043290747.1;Name=WP_043290747.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406970.1;locus_tag=LDO50_RS05620;product=type VI secretion system Vgr family protein;protein_id=WP_043290747.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 10788 11588 . + . ID=gene-LDO50_RS05630;Name=LDO50_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05630;old_locus_tag=BVI1335_130008 NZ_CAJZAO010000035.1 Protein Homology CDS 10788 11588 . + 0 ID=cds-WP_014722334.1;Parent=gene-LDO50_RS05630;Dbxref=GenBank:WP_014722334.1;Name=WP_014722334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765337.1;locus_tag=LDO50_RS05630;product=transporter substrate-binding domain-containing protein;protein_id=WP_014722334.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 11911 12612 . + . ID=gene-LDO50_RS05635;Name=LDO50_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05635;old_locus_tag=BVI1335_130010 NZ_CAJZAO010000035.1 GeneMarkS-2+ CDS 11911 12612 . + 0 ID=cds-WP_212164563.1;Parent=gene-LDO50_RS05635;Dbxref=GenBank:WP_212164563.1;Name=WP_212164563.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS05635;product=hypothetical protein;protein_id=WP_212164563.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 12748 12823 . - . ID=gene-LDO50_RS05640;Name=LDO50_RS05640;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS05640;old_locus_tag=BVI1335_TRNA44 NZ_CAJZAO010000035.1 tRNAscan-SE tRNA 12748 12823 . - . ID=rna-LDO50_RS05640;Parent=gene-LDO50_RS05640;anticodon=(pos:complement(12788..12790));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS05640;product=tRNA-Thr NZ_CAJZAO010000035.1 tRNAscan-SE exon 12748 12823 . - . ID=exon-LDO50_RS05640-1;Parent=rna-LDO50_RS05640;anticodon=(pos:complement(12788..12790));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS05640;product=tRNA-Thr NZ_CAJZAO010000035.1 RefSeq gene 12843 13349 . - . ID=gene-LDO50_RS05645;Name=LDO50_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05645;old_locus_tag=BVI1335_130011 NZ_CAJZAO010000035.1 Protein Homology CDS 12843 13349 . - 0 ID=cds-WP_014722317.1;Parent=gene-LDO50_RS05645;Dbxref=GenBank:WP_014722317.1;Name=WP_014722317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412425.1;locus_tag=LDO50_RS05645;product=ClpXP protease specificity-enhancing factor;protein_id=WP_014722317.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 13421 14032 . - . ID=gene-LDO50_RS05650;Name=LDO50_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05650;old_locus_tag=BVI1335_130012 NZ_CAJZAO010000035.1 Protein Homology CDS 13421 14032 . - 0 ID=cds-WP_006400565.1;Parent=gene-LDO50_RS05650;Dbxref=GenBank:WP_006400565.1;Name=WP_006400565.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006999756.1;locus_tag=LDO50_RS05650;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_006400565.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 14127 14885 . - . ID=gene-LDO50_RS05655;Name=LDO50_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05655;old_locus_tag=BVI1335_130013 NZ_CAJZAO010000035.1 Protein Homology CDS 14127 14885 . - 0 ID=cds-WP_014722316.1;Parent=gene-LDO50_RS05655;Dbxref=GenBank:WP_014722316.1;Name=WP_014722316.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199892.1;locus_tag=LDO50_RS05655;product=cytochrome c1;protein_id=WP_014722316.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 14907 16289 . - . ID=gene-LDO50_RS05660;Name=LDO50_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05660;old_locus_tag=BVI1335_130014 NZ_CAJZAO010000035.1 Protein Homology CDS 14907 16289 . - 0 ID=cds-WP_011883068.1;Parent=gene-LDO50_RS05660;Dbxref=GenBank:WP_011883068.1;Name=WP_011883068.1;Ontology_term=GO:0022904,GO:0008121,GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=quinol-cytochrome-c reductase activity|0008121||IEA,electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199894.1;locus_tag=LDO50_RS05660;product=cytochrome b;protein_id=WP_011883068.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 16289 16909 . - . ID=gene-LDO50_RS05665;Name=petA;gbkey=Gene;gene=petA;gene_biotype=protein_coding;locus_tag=LDO50_RS05665;old_locus_tag=BVI1335_130015 NZ_CAJZAO010000035.1 Protein Homology CDS 16289 16909 . - 0 ID=cds-WP_011883067.1;Parent=gene-LDO50_RS05665;Dbxref=GenBank:WP_011883067.1;Name=WP_011883067.1;Ontology_term=GO:0009060,GO:0008121,GO:0009055,GO:0045275;gbkey=CDS;gene=petA;go_component=respiratory chain complex III|0045275||IEA;go_function=quinol-cytochrome-c reductase activity|0008121||IEA,electron transfer activity|0009055||IEA;go_process=aerobic respiration|0009060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491868.1;locus_tag=LDO50_RS05665;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;protein_id=WP_011883067.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 17129 17875 . - . ID=gene-LDO50_RS05670;Name=LDO50_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05670;old_locus_tag=BVI1335_130016 NZ_CAJZAO010000035.1 Protein Homology CDS 17129 17875 . - 0 ID=cds-WP_011883066.1;Parent=gene-LDO50_RS05670;Dbxref=GenBank:WP_011883066.1;Name=WP_011883066.1;Ontology_term=GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906350.1;locus_tag=LDO50_RS05670;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_011883066.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 17897 19105 . + . ID=gene-LDO50_RS05675;Name=LDO50_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05675;old_locus_tag=BVI1335_130017 NZ_CAJZAO010000035.1 Protein Homology CDS 17897 19105 . + 0 ID=cds-WP_011883065.1;Parent=gene-LDO50_RS05675;Dbxref=GenBank:WP_011883065.1;Name=WP_011883065.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751792.1;locus_tag=LDO50_RS05675;product=Do family serine endopeptidase;protein_id=WP_011883065.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 19251 20033 . - . ID=gene-LDO50_RS05680;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=LDO50_RS05680;old_locus_tag=BVI1335_130018 NZ_CAJZAO010000035.1 Protein Homology CDS 19251 20033 . - 0 ID=cds-WP_175658354.1;Parent=gene-LDO50_RS05680;Dbxref=GenBank:WP_175658354.1;Name=WP_175658354.1;Ontology_term=GO:0015628,GO:0005886;gbkey=CDS;gene=tatC;go_component=plasma membrane|0005886||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757066.1;locus_tag=LDO50_RS05680;product=twin-arginine translocase subunit TatC;protein_id=WP_175658354.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 20075 20608 . - . ID=gene-LDO50_RS05685;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=LDO50_RS05685;old_locus_tag=BVI1335_130019 NZ_CAJZAO010000035.1 Protein Homology CDS 20075 20608 . - 0 ID=cds-WP_059460384.1;Parent=gene-LDO50_RS05685;Dbxref=GenBank:WP_059460384.1;Name=WP_059460384.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477114.1;locus_tag=LDO50_RS05685;product=Sec-independent protein translocase protein TatB;protein_id=WP_059460384.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 20635 20865 . - . ID=gene-LDO50_RS05690;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=LDO50_RS05690;old_locus_tag=BVI1335_130020 NZ_CAJZAO010000035.1 Protein Homology CDS 20635 20865 . - 0 ID=cds-WP_006751795.1;Parent=gene-LDO50_RS05690;Dbxref=GenBank:WP_006751795.1;Name=WP_006751795.1;Ontology_term=GO:0043953,GO:0016020;gbkey=CDS;gene=tatA;go_component=membrane|0016020||IEA;go_process=protein transport by the Tat complex|0043953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477115.1;locus_tag=LDO50_RS05690;product=Sec-independent protein translocase subunit TatA;protein_id=WP_006751795.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 20960 21325 . - . ID=gene-LDO50_RS05695;Name=LDO50_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05695;old_locus_tag=BVI1335_130021 NZ_CAJZAO010000035.1 Protein Homology CDS 20960 21325 . - 0 ID=cds-WP_045578581.1;Parent=gene-LDO50_RS05695;Dbxref=GenBank:WP_045578581.1;Name=WP_045578581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185206.1;locus_tag=LDO50_RS05695;product=histidine triad nucleotide-binding protein;protein_id=WP_045578581.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 21354 21746 . - . ID=gene-LDO50_RS05700;Name=LDO50_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05700;old_locus_tag=BVI1335_130022 NZ_CAJZAO010000035.1 Protein Homology CDS 21354 21746 . - 0 ID=cds-WP_011883061.1;Parent=gene-LDO50_RS05700;Dbxref=GenBank:WP_011883061.1;Name=WP_011883061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883061.1;locus_tag=LDO50_RS05700;product=DUF4870 family protein;protein_id=WP_011883061.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 21828 22193 . - . ID=gene-LDO50_RS05705;Name=LDO50_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05705;old_locus_tag=BVI1335_130023 NZ_CAJZAO010000035.1 Protein Homology CDS 21828 22193 . - 0 ID=cds-WP_011883060.1;Parent=gene-LDO50_RS05705;Dbxref=GenBank:WP_011883060.1;Name=WP_011883060.1;Ontology_term=GO:0000105,GO:0004636;gbkey=CDS;go_function=phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883060.1;locus_tag=LDO50_RS05705;product=phosphoribosyl-ATP diphosphatase;protein_id=WP_011883060.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 22190 22606 . - . ID=gene-LDO50_RS05710;Name=hisI;gbkey=Gene;gene=hisI;gene_biotype=protein_coding;locus_tag=LDO50_RS05710;old_locus_tag=BVI1335_130024 NZ_CAJZAO010000035.1 Protein Homology CDS 22190 22606 . - 0 ID=cds-WP_046426790.1;Parent=gene-LDO50_RS05710;Dbxref=GenBank:WP_046426790.1;Name=WP_046426790.1;Ontology_term=GO:0000105,GO:0004635;gbkey=CDS;gene=hisI;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494429.1;locus_tag=LDO50_RS05710;product=phosphoribosyl-AMP cyclohydrolase;protein_id=WP_046426790.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 22606 23379 . - . ID=gene-LDO50_RS05715;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=LDO50_RS05715;old_locus_tag=BVI1335_130025 NZ_CAJZAO010000035.1 Protein Homology CDS 22606 23379 . - 0 ID=cds-WP_059668558.1;Parent=gene-LDO50_RS05715;Dbxref=GenBank:WP_059668558.1;Name=WP_059668558.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362933.1;locus_tag=LDO50_RS05715;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_059668558.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 23486 24241 . - . ID=gene-LDO50_RS05720;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=LDO50_RS05720;old_locus_tag=BVI1335_130026 NZ_CAJZAO010000035.1 Protein Homology CDS 23486 24241 . - 0 ID=cds-WP_011883057.1;Parent=gene-LDO50_RS05720;Dbxref=GenBank:WP_011883057.1;Name=WP_011883057.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883057.1;locus_tag=LDO50_RS05720;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_011883057.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 24405 25046 . - . ID=gene-LDO50_RS05725;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=LDO50_RS05725;old_locus_tag=BVI1335_130027 NZ_CAJZAO010000035.1 Protein Homology CDS 24405 25046 . - 0 ID=cds-WP_060091967.1;Parent=gene-LDO50_RS05725;Dbxref=GenBank:WP_060091967.1;Name=WP_060091967.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180210.1;locus_tag=LDO50_RS05725;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_060091967.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 25043 25663 . - . ID=gene-LDO50_RS05730;Name=LDO50_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05730;old_locus_tag=BVI1335_130028 NZ_CAJZAO010000035.1 Protein Homology CDS 25043 25663 . - 0 ID=cds-WP_011883055.1;Parent=gene-LDO50_RS05730;Dbxref=GenBank:WP_011883055.1;Name=WP_011883055.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092886.1;locus_tag=LDO50_RS05730;product=YchE family NAAT transporter;protein_id=WP_011883055.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 25726 26313 . - . ID=gene-LDO50_RS05735;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=LDO50_RS05735;old_locus_tag=BVI1335_130029 NZ_CAJZAO010000035.1 Protein Homology CDS 25726 26313 . - 0 ID=cds-WP_006765368.1;Parent=gene-LDO50_RS05735;Dbxref=GenBank:WP_006765368.1;Name=WP_006765368.1;Ontology_term=GO:0000105,GO:0004424;gbkey=CDS;gene=hisB;go_function=imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400582.1;locus_tag=LDO50_RS05735;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_006765368.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 26376 27449 . - . ID=gene-LDO50_RS05740;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=LDO50_RS05740;old_locus_tag=BVI1335_130030 NZ_CAJZAO010000035.1 Protein Homology CDS 26376 27449 . - 0 ID=cds-WP_060091965.1;Parent=gene-LDO50_RS05740;Dbxref=GenBank:WP_060091965.1;Name=WP_060091965.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751805.1;locus_tag=LDO50_RS05740;product=histidinol-phosphate transaminase;protein_id=WP_060091965.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 27570 28886 . - . ID=gene-LDO50_RS05745;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=LDO50_RS05745;old_locus_tag=BVI1335_130031 NZ_CAJZAO010000035.1 Protein Homology CDS 27570 28886 . - 0 ID=cds-WP_011883053.1;Parent=gene-LDO50_RS05745;Dbxref=GenBank:WP_011883053.1;Name=WP_011883053.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327781.1;locus_tag=LDO50_RS05745;product=histidinol dehydrogenase;protein_id=WP_011883053.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 28911 29564 . - . ID=gene-LDO50_RS05750;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=LDO50_RS05750;old_locus_tag=BVI1335_130032 NZ_CAJZAO010000035.1 Protein Homology CDS 28911 29564 . - 0 ID=cds-WP_011883052.1;Parent=gene-LDO50_RS05750;Dbxref=GenBank:WP_011883052.1;Name=WP_011883052.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751807.1;locus_tag=LDO50_RS05750;product=ATP phosphoribosyltransferase;protein_id=WP_011883052.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 29561 30910 . - . ID=gene-LDO50_RS05755;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=LDO50_RS05755;old_locus_tag=BVI1335_130033 NZ_CAJZAO010000035.1 Protein Homology CDS 29561 30910 . - 0 ID=cds-WP_011883051.1;Parent=gene-LDO50_RS05755;Dbxref=GenBank:WP_011883051.1;Name=WP_011883051.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041492724.1;locus_tag=LDO50_RS05755;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_011883051.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 30924 31163 . - . ID=gene-LDO50_RS05760;Name=LDO50_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05760;old_locus_tag=BVI1335_130034 NZ_CAJZAO010000035.1 Protein Homology CDS 30924 31163 . - 0 ID=cds-WP_059460389.1;Parent=gene-LDO50_RS05760;Dbxref=GenBank:WP_059460389.1;Name=WP_059460389.1;Ontology_term=GO:0051604,GO:0051536,GO:1990229;gbkey=CDS;go_component=iron-sulfur cluster assembly complex|1990229||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029348.1;locus_tag=LDO50_RS05760;product=BolA family protein;protein_id=WP_059460389.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 31215 31970 . - . ID=gene-LDO50_RS05765;Name=LDO50_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05765;old_locus_tag=BVI1335_130035 NZ_CAJZAO010000035.1 Protein Homology CDS 31215 31970 . - 0 ID=cds-WP_011883050.1;Parent=gene-LDO50_RS05765;Dbxref=GenBank:WP_011883050.1;Name=WP_011883050.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696427.1;locus_tag=LDO50_RS05765;product=ABC transporter permease;protein_id=WP_011883050.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 31967 32893 . - . ID=gene-LDO50_RS05770;Name=LDO50_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05770;old_locus_tag=BVI1335_130036 NZ_CAJZAO010000035.1 Protein Homology CDS 31967 32893 . - 0 ID=cds-WP_011883049.1;Parent=gene-LDO50_RS05770;Dbxref=GenBank:WP_011883049.1;Name=WP_011883049.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554063.1;locus_tag=LDO50_RS05770;product=ABC transporter ATP-binding protein;protein_id=WP_011883049.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 33085 33360 . - . ID=gene-LDO50_RS05775;Name=LDO50_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05775;old_locus_tag=BVI1335_130037 NZ_CAJZAO010000035.1 Protein Homology CDS 33085 33360 . - 0 ID=cds-WP_045578583.1;Parent=gene-LDO50_RS05775;Dbxref=GenBank:WP_045578583.1;Name=WP_045578583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546610.1;locus_tag=LDO50_RS05775;product=STAS domain-containing protein;protein_id=WP_045578583.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq gene 33357 33986 . - . ID=gene-LDO50_RS05780;Name=LDO50_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05780;old_locus_tag=BVI1335_130038 NZ_CAJZAO010000035.1 Protein Homology CDS 33357 33986 . - 0 ID=cds-WP_011883047.1;Parent=gene-LDO50_RS05780;Dbxref=GenBank:WP_011883047.1;Name=WP_011883047.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106880.1;locus_tag=LDO50_RS05780;product=MlaC/ttg2D family ABC transporter substrate-binding protein;protein_id=WP_011883047.1;transl_table=11 NZ_CAJZAO010000035.1 RefSeq pseudogene 34111 34263 . - . ID=gene-LDO50_RS05785;Name=LDO50_RS05785;end_range=34263,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS05785;partial=true;pseudo=true NZ_CAJZAO010000035.1 Protein Homology CDS 34111 34263 . - 0 ID=cds-LDO50_RS05785;Parent=gene-LDO50_RS05785;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=34263,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883046.1;locus_tag=LDO50_RS05785;partial=true;product=MlaA family lipoprotein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000036.1 1 6028 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000036.1 RefSeq region 1 6028 . + . ID=NZ_CAJZAO010000036.1:1..6028;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_130 NZ_CAJZAO010000036.1 RefSeq gene 59 766 . - . ID=gene-LDO50_RS05790;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=LDO50_RS05790;old_locus_tag=BVI1335_1300002 NZ_CAJZAO010000036.1 Protein Homology CDS 59 766 . - 0 ID=cds-WP_224019509.1;Parent=gene-LDO50_RS05790;Dbxref=GenBank:WP_224019509.1;Name=WP_224019509.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884825.1;locus_tag=LDO50_RS05790;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_224019509.1;transl_table=11 NZ_CAJZAO010000036.1 cmsearch riboswitch 932 1165 . - . ID=id-NZ_CAJZAO010000036.1:932..1165;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAO010000036.1 cmsearch riboswitch 1397 1647 . + . ID=id-NZ_CAJZAO010000036.1:1397..1647;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAO010000036.1 RefSeq gene 1836 2894 . + . ID=gene-LDO50_RS05795;Name=LDO50_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05795;old_locus_tag=BVI1335_1300004 NZ_CAJZAO010000036.1 Protein Homology CDS 1836 2894 . + 0 ID=cds-WP_011884826.1;Parent=gene-LDO50_RS05795;Dbxref=GenBank:WP_011884826.1;Name=WP_011884826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004266608.1;locus_tag=LDO50_RS05795;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_011884826.1;transl_table=11 NZ_CAJZAO010000036.1 RefSeq gene 2920 4008 . + . ID=gene-LDO50_RS05800;Name=cobW;gbkey=Gene;gene=cobW;gene_biotype=protein_coding;locus_tag=LDO50_RS05800;old_locus_tag=BVI1335_1300005 NZ_CAJZAO010000036.1 Protein Homology CDS 2920 4008 . + 0 ID=cds-WP_059622548.1;Parent=gene-LDO50_RS05800;Dbxref=GenBank:WP_059622548.1;Name=WP_059622548.1;Ontology_term=GO:0009236;gbkey=CDS;gene=cobW;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328470.1;locus_tag=LDO50_RS05800;product=cobalamin biosynthesis protein CobW;protein_id=WP_059622548.1;transl_table=11 NZ_CAJZAO010000036.1 RefSeq gene 4013 6028 . + . ID=gene-LDO50_RS05805;Name=LDO50_RS05805;end_range=6028,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05805;partial=true NZ_CAJZAO010000036.1 Protein Homology CDS 4013 6028 . + 0 ID=cds-WP_224019511.1;Parent=gene-LDO50_RS05805;Dbxref=GenBank:WP_224019511.1;Name=WP_224019511.1;Ontology_term=GO:0009058;end_range=6028,.;gbkey=CDS;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328471.1;locus_tag=LDO50_RS05805;partial=true;product=cobaltochelatase subunit CobN;protein_id=WP_224019511.1;transl_table=11 ##sequence-region NZ_CAJZAO010000037.1 1 10705 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000037.1 RefSeq region 1 10705 . + . ID=NZ_CAJZAO010000037.1:1..10705;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_131 NZ_CAJZAO010000037.1 RefSeq gene 174 1272 . + . ID=gene-LDO50_RS05810;Name=LDO50_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05810;old_locus_tag=BVI1335_1310001;partial=true;start_range=.,174 NZ_CAJZAO010000037.1 Protein Homology CDS 174 1272 . + 1 ID=cds-WP_372586081.1;Parent=gene-LDO50_RS05810;Dbxref=GenBank:WP_372586081.1;Name=WP_372586081.1;Ontology_term=GO:0030001,GO:0046872,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion binding|0046872||IEA,metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217884.1;locus_tag=LDO50_RS05810;partial=true;product=NRAMP family divalent metal transporter;protein_id=WP_372586081.1;start_range=.,174;transl_table=11 NZ_CAJZAO010000037.1 RefSeq gene 1373 2722 . - . ID=gene-LDO50_RS05815;Name=LDO50_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05815;old_locus_tag=BVI1335_1310002 NZ_CAJZAO010000037.1 Protein Homology CDS 1373 2722 . - 0 ID=cds-WP_224019513.1;Parent=gene-LDO50_RS05815;Dbxref=GenBank:WP_224019513.1;Name=WP_224019513.1;Ontology_term=GO:0016310,GO:0004674,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015038930.1;locus_tag=LDO50_RS05815;product=type II toxin-antitoxin system HipA family toxin;protein_id=WP_224019513.1;transl_table=11 NZ_CAJZAO010000037.1 RefSeq gene 2722 3063 . - . ID=gene-LDO50_RS05820;Name=LDO50_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05820;old_locus_tag=BVI1335_1310003 NZ_CAJZAO010000037.1 Protein Homology CDS 2722 3063 . - 0 ID=cds-WP_059459673.1;Parent=gene-LDO50_RS05820;Dbxref=GenBank:WP_059459673.1;Name=WP_059459673.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011465339.1;locus_tag=LDO50_RS05820;product=helix-turn-helix domain-containing protein;protein_id=WP_059459673.1;transl_table=11 NZ_CAJZAO010000037.1 RefSeq gene 3503 4114 . - . ID=gene-LDO50_RS05825;Name=LDO50_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05825;old_locus_tag=BVI1335_1310005 NZ_CAJZAO010000037.1 Protein Homology CDS 3503 4114 . - 0 ID=cds-WP_011879861.1;Parent=gene-LDO50_RS05825;Dbxref=GenBank:WP_011879861.1;Name=WP_011879861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879861.1;locus_tag=LDO50_RS05825;product=DUF892 family protein;protein_id=WP_011879861.1;transl_table=11 NZ_CAJZAO010000037.1 RefSeq gene 4174 4785 . - . ID=gene-LDO50_RS05830;Name=LDO50_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05830;old_locus_tag=BVI1335_1310006 NZ_CAJZAO010000037.1 Protein Homology CDS 4174 4785 . - 0 ID=cds-WP_059459651.1;Parent=gene-LDO50_RS05830;Dbxref=GenBank:WP_059459651.1;Name=WP_059459651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398919.1;locus_tag=LDO50_RS05830;product=DUF4142 domain-containing protein;protein_id=WP_059459651.1;transl_table=11 NZ_CAJZAO010000037.1 RefSeq gene 4813 5670 . - . ID=gene-LDO50_RS05835;Name=LDO50_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05835;old_locus_tag=BVI1335_1310007 NZ_CAJZAO010000037.1 Protein Homology CDS 4813 5670 . - 0 ID=cds-WP_046428962.1;Parent=gene-LDO50_RS05835;Dbxref=GenBank:WP_046428962.1;Name=WP_046428962.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545572.1;locus_tag=LDO50_RS05835;product=SDR family oxidoreductase;protein_id=WP_046428962.1;transl_table=11 NZ_CAJZAO010000037.1 RefSeq gene 5807 6373 . - . ID=gene-LDO50_RS05840;Name=LDO50_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05840;old_locus_tag=BVI1335_1310009 NZ_CAJZAO010000037.1 Protein Homology CDS 5807 6373 . - 0 ID=cds-WP_011879858.1;Parent=gene-LDO50_RS05840;Dbxref=GenBank:WP_011879858.1;Name=WP_011879858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761068.1;locus_tag=LDO50_RS05840;product=membrane protein;protein_id=WP_011879858.1;transl_table=11 NZ_CAJZAO010000037.1 RefSeq gene 6438 6737 . - . ID=gene-LDO50_RS05845;Name=LDO50_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05845;old_locus_tag=BVI1335_1310010 NZ_CAJZAO010000037.1 Protein Homology CDS 6438 6737 . - 0 ID=cds-WP_014725677.1;Parent=gene-LDO50_RS05845;Dbxref=GenBank:WP_014725677.1;Name=WP_014725677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498358.1;locus_tag=LDO50_RS05845;product=DUF2795 domain-containing protein;protein_id=WP_014725677.1;transl_table=11 NZ_CAJZAO010000037.1 RefSeq gene 6776 7804 . - . ID=gene-LDO50_RS05850;Name=LDO50_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05850;old_locus_tag=BVI1335_1310011 NZ_CAJZAO010000037.1 Protein Homology CDS 6776 7804 . - 0 ID=cds-WP_059550140.1;Parent=gene-LDO50_RS05850;Dbxref=GenBank:WP_059550140.1;Name=WP_059550140.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407427.1;locus_tag=LDO50_RS05850;product=SDR family oxidoreductase;protein_id=WP_059550140.1;transl_table=11 NZ_CAJZAO010000037.1 RefSeq gene 7830 8234 . - . ID=gene-LDO50_RS05855;Name=LDO50_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05855;old_locus_tag=BVI1335_1310012 NZ_CAJZAO010000037.1 Protein Homology CDS 7830 8234 . - 0 ID=cds-WP_059460754.1;Parent=gene-LDO50_RS05855;Dbxref=GenBank:WP_059460754.1;Name=WP_059460754.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398914.1;locus_tag=LDO50_RS05855;product=BON domain-containing protein;protein_id=WP_059460754.1;transl_table=11 NZ_CAJZAO010000037.1 RefSeq gene 8477 9790 . + . ID=gene-LDO50_RS05860;Name=LDO50_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05860;old_locus_tag=BVI1335_1310013 NZ_CAJZAO010000037.1 Protein Homology CDS 8477 9790 . + 0 ID=cds-WP_034192856.1;Parent=gene-LDO50_RS05860;Dbxref=GenBank:WP_034192856.1;Name=WP_034192856.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761072.1;locus_tag=LDO50_RS05860;product=glycosyltransferase family 4 protein;protein_id=WP_034192856.1;transl_table=11 NZ_CAJZAO010000037.1 RefSeq gene 9790 10705 . + . ID=gene-LDO50_RS05865;Name=LDO50_RS05865;end_range=10705,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05865;partial=true NZ_CAJZAO010000037.1 Protein Homology CDS 9790 10705 . + 0 ID=cds-WP_224019515.1;Parent=gene-LDO50_RS05865;Dbxref=GenBank:WP_224019515.1;Name=WP_224019515.1;Ontology_term=GO:0042732,GO:0048040,GO:0070403;end_range=10705,.;gbkey=CDS;go_function=UDP-glucuronate decarboxylase activity|0048040||IEA,NAD+ binding|0070403||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004555217.1;locus_tag=LDO50_RS05865;partial=true;product=UDP-glucuronic acid decarboxylase family protein;protein_id=WP_224019515.1;transl_table=11 ##sequence-region NZ_CAJZAO010000038.1 1 2530 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000038.1 RefSeq region 1 2530 . + . ID=NZ_CAJZAO010000038.1:1..2530;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_132 NZ_CAJZAO010000038.1 RefSeq gene 1 290 . + . ID=gene-LDO50_RS05870;Name=LDO50_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05870;old_locus_tag=BVI1335_1320001;partial=true;start_range=.,1 NZ_CAJZAO010000038.1 Protein Homology CDS 1 290 . + 2 ID=cds-WP_443797724.1;Parent=gene-LDO50_RS05870;Dbxref=GenBank:WP_443797724.1;Name=WP_443797724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547055.1;locus_tag=LDO50_RS05870;partial=true;product=AMP-binding enzyme;protein_id=WP_443797724.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000038.1 RefSeq gene 517 1584 . + . ID=gene-LDO50_RS05875;Name=LDO50_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05875;old_locus_tag=BVI1335_1320002 NZ_CAJZAO010000038.1 Protein Homology CDS 517 1584 . + 0 ID=cds-WP_059453362.1;Parent=gene-LDO50_RS05875;Dbxref=GenBank:WP_059453362.1;Name=WP_059453362.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339490.1;locus_tag=LDO50_RS05875;product=porin;protein_id=WP_059453362.1;transl_table=11 NZ_CAJZAO010000038.1 RefSeq gene 2103 2530 . + . ID=gene-LDO50_RS05880;Name=LDO50_RS05880;end_range=2530,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05880;partial=true NZ_CAJZAO010000038.1 Protein Homology CDS 2103 2530 . + 0 ID=cds-WP_224019517.1;Parent=gene-LDO50_RS05880;Dbxref=GenBank:WP_224019517.1;Name=WP_224019517.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=2530,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372234.1;locus_tag=LDO50_RS05880;partial=true;product=MFS transporter;protein_id=WP_224019517.1;transl_table=11 ##sequence-region NZ_CAJZAO010000039.1 1 37254 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000039.1 RefSeq region 1 37254 . + . ID=NZ_CAJZAO010000039.1:1..37254;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_133 NZ_CAJZAO010000039.1 RefSeq pseudogene 1 314 . + . ID=gene-LDO50_RS05885;Name=LDO50_RS05885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS05885;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000039.1 GeneMarkS-2+ CDS 1 314 . + 2 ID=cds-LDO50_RS05885;Parent=gene-LDO50_RS05885;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS05885;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 424 1428 . + . ID=gene-LDO50_RS05890;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=LDO50_RS05890;old_locus_tag=BVI1335_1330002 NZ_CAJZAO010000039.1 Protein Homology CDS 424 1428 . + 0 ID=cds-WP_011885965.1;Parent=gene-LDO50_RS05890;Dbxref=GenBank:WP_011885965.1;Name=WP_011885965.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896110.1;locus_tag=LDO50_RS05890;product=glycine--tRNA ligase subunit alpha;protein_id=WP_011885965.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 1451 3550 . + . ID=gene-LDO50_RS05895;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=LDO50_RS05895;old_locus_tag=BVI1335_1330003 NZ_CAJZAO010000039.1 Protein Homology CDS 1451 3550 . + 0 ID=cds-WP_034192691.1;Parent=gene-LDO50_RS05895;Dbxref=GenBank:WP_034192691.1;Name=WP_034192691.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009963525.1;locus_tag=LDO50_RS05895;product=glycine--tRNA ligase subunit beta;protein_id=WP_034192691.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 3560 4123 . + . ID=gene-LDO50_RS05900;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=LDO50_RS05900;old_locus_tag=BVI1335_1330004 NZ_CAJZAO010000039.1 Protein Homology CDS 3560 4123 . + 0 ID=cds-WP_011885967.1;Parent=gene-LDO50_RS05900;Dbxref=GenBank:WP_011885967.1;Name=WP_011885967.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010101763.1;locus_tag=LDO50_RS05900;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_011885967.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 4167 4931 . + . ID=gene-LDO50_RS05905;Name=LDO50_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05905;old_locus_tag=BVI1335_1330005 NZ_CAJZAO010000039.1 Protein Homology CDS 4167 4931 . + 0 ID=cds-WP_011885968.1;Parent=gene-LDO50_RS05905;Dbxref=GenBank:WP_011885968.1;Name=WP_011885968.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398329.1;locus_tag=LDO50_RS05905;product=lysophospholipid acyltransferase family protein;protein_id=WP_011885968.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 4978 5895 . + . ID=gene-LDO50_RS05910;Name=LDO50_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05910;old_locus_tag=BVI1335_1330006 NZ_CAJZAO010000039.1 Protein Homology CDS 4978 5895 . + 0 ID=cds-WP_069246392.1;Parent=gene-LDO50_RS05910;Dbxref=GenBank:WP_069246392.1;Name=WP_069246392.1;Ontology_term=GO:0006508,GO:0008233,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=peptidase activity|0008233||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398328.1;locus_tag=LDO50_RS05910;product=M48 family metallopeptidase;protein_id=WP_069246392.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 5999 6388 . - . ID=gene-LDO50_RS05915;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=LDO50_RS05915;old_locus_tag=BVI1335_1330008 NZ_CAJZAO010000039.1 Protein Homology CDS 5999 6388 . - 0 ID=cds-WP_011885970.1;Parent=gene-LDO50_RS05915;Dbxref=GenBank:WP_011885970.1;Name=WP_011885970.1;Ontology_term=GO:0051596,GO:0004462,GO:0046872;gbkey=CDS;gene=gloA;go_function=lactoylglutathione lyase activity|0004462||IEA,metal ion binding|0046872||IEA;go_process=methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090736.1;locus_tag=LDO50_RS05915;product=lactoylglutathione lyase;protein_id=WP_011885970.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 6805 7740 . + . ID=gene-LDO50_RS05920;Name=LDO50_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05920;old_locus_tag=BVI1335_1330009 NZ_CAJZAO010000039.1 Protein Homology CDS 6805 7740 . + 0 ID=cds-WP_011885971.1;Parent=gene-LDO50_RS05920;Dbxref=GenBank:WP_011885971.1;Name=WP_011885971.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491616.1;locus_tag=LDO50_RS05920;product=DMT family transporter;protein_id=WP_011885971.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 8059 8889 . - . ID=gene-LDO50_RS05925;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=LDO50_RS05925;old_locus_tag=BVI1335_1330011 NZ_CAJZAO010000039.1 Protein Homology CDS 8059 8889 . - 0 ID=cds-WP_011885972.1;Parent=gene-LDO50_RS05925;Dbxref=GenBank:WP_011885972.1;Name=WP_011885972.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896103.1;locus_tag=LDO50_RS05925;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_011885972.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 8938 9924 . - . ID=gene-LDO50_RS05930;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=LDO50_RS05930;old_locus_tag=BVI1335_1330012 NZ_CAJZAO010000039.1 Protein Homology CDS 8938 9924 . - 0 ID=cds-WP_011885973.1;Parent=gene-LDO50_RS05930;Dbxref=GenBank:WP_011885973.1;Name=WP_011885973.1;Ontology_term=GO:0042823,GO:0050570,GO:0051287;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885973.1;locus_tag=LDO50_RS05930;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_011885973.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 9936 11294 . - . ID=gene-LDO50_RS05935;Name=LDO50_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05935;old_locus_tag=BVI1335_1330013 NZ_CAJZAO010000039.1 Protein Homology CDS 9936 11294 . - 0 ID=cds-WP_011885974.1;Parent=gene-LDO50_RS05935;Dbxref=GenBank:WP_011885974.1;Name=WP_011885974.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757836.1;locus_tag=LDO50_RS05935;product=peptidylprolyl isomerase;protein_id=WP_011885974.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 11346 13706 . - . ID=gene-LDO50_RS05940;Name=LDO50_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05940;old_locus_tag=BVI1335_1330014 NZ_CAJZAO010000039.1 Protein Homology CDS 11346 13706 . - 0 ID=cds-WP_011885975.1;Parent=gene-LDO50_RS05940;Dbxref=GenBank:WP_011885975.1;Name=WP_011885975.1;Ontology_term=GO:0015920;gbkey=CDS;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546173.1;locus_tag=LDO50_RS05940;product=LPS-assembly protein LptD;protein_id=WP_011885975.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 13930 14979 . + . ID=gene-LDO50_RS05945;Name=LDO50_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05945;old_locus_tag=BVI1335_1330015 NZ_CAJZAO010000039.1 Protein Homology CDS 13930 14979 . + 0 ID=cds-WP_011885976.1;Parent=gene-LDO50_RS05945;Dbxref=GenBank:WP_011885976.1;Name=WP_011885976.1;Ontology_term=GO:0016310,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010114048.1;locus_tag=LDO50_RS05945;product=aminoglycoside phosphotransferase family protein;protein_id=WP_011885976.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 15002 15721 . + . ID=gene-LDO50_RS05950;Name=murU;gbkey=Gene;gene=murU;gene_biotype=protein_coding;locus_tag=LDO50_RS05950;old_locus_tag=BVI1335_1330016 NZ_CAJZAO010000039.1 Protein Homology CDS 15002 15721 . + 0 ID=cds-WP_046423983.1;Parent=gene-LDO50_RS05950;Dbxref=GenBank:WP_046423983.1;Name=WP_046423983.1;Ontology_term=GO:0009252,GO:0016779;gbkey=CDS;gene=murU;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723609.1;locus_tag=LDO50_RS05950;product=N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU;protein_id=WP_046423983.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 16011 17882 . - . ID=gene-LDO50_RS05955;Name=LDO50_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05955;old_locus_tag=BVI1335_1330017 NZ_CAJZAO010000039.1 Protein Homology CDS 16011 17882 . - 0 ID=cds-WP_045579429.1;Parent=gene-LDO50_RS05955;Dbxref=GenBank:WP_045579429.1;Name=WP_045579429.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896097.1;locus_tag=LDO50_RS05955;product=ABCB family ABC transporter ATP-binding protein/permease;protein_id=WP_045579429.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 18056 18451 . + . ID=gene-LDO50_RS05960;Name=LDO50_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05960;old_locus_tag=BVI1335_1330018 NZ_CAJZAO010000039.1 Protein Homology CDS 18056 18451 . + 0 ID=cds-WP_014723611.1;Parent=gene-LDO50_RS05960;Dbxref=GenBank:WP_014723611.1;Name=WP_014723611.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723611.1;locus_tag=LDO50_RS05960;product=acyl-CoA thioesterase;protein_id=WP_014723611.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 18486 18968 . - . ID=gene-LDO50_RS05965;Name=LDO50_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05965;old_locus_tag=BVI1335_1330019 NZ_CAJZAO010000039.1 Protein Homology CDS 18486 18968 . - 0 ID=cds-WP_059461494.1;Parent=gene-LDO50_RS05965;Dbxref=GenBank:WP_059461494.1;Name=WP_059461494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188943.1;locus_tag=LDO50_RS05965;product=nitrate reductase associated protein;protein_id=WP_059461494.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 19048 19911 . + . ID=gene-LDO50_RS05970;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=LDO50_RS05970;old_locus_tag=BVI1335_1330020 NZ_CAJZAO010000039.1 Protein Homology CDS 19048 19911 . + 0 ID=cds-WP_232356056.1;Parent=gene-LDO50_RS05970;Dbxref=GenBank:WP_232356056.1;Name=WP_232356056.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415971.1;locus_tag=LDO50_RS05970;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_232356056.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 19896 21062 . - . ID=gene-LDO50_RS05975;Name=LDO50_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS05975;old_locus_tag=BVI1335_1330021 NZ_CAJZAO010000039.1 Protein Homology CDS 19896 21062 . - 0 ID=cds-WP_059474997.1;Parent=gene-LDO50_RS05975;Dbxref=GenBank:WP_059474997.1;Name=WP_059474997.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885982.1;locus_tag=LDO50_RS05975;product=fatty acid desaturase;protein_id=WP_059474997.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 21115 21447 . - . ID=gene-LDO50_RS05980;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=LDO50_RS05980;old_locus_tag=BVI1335_1330022 NZ_CAJZAO010000039.1 Protein Homology CDS 21115 21447 . - 0 ID=cds-WP_011885983.1;Parent=gene-LDO50_RS05980;Dbxref=GenBank:WP_011885983.1;Name=WP_011885983.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoD;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352504.1;locus_tag=LDO50_RS05980;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_011885983.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 21448 22059 . - . ID=gene-LDO50_RS05985;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;locus_tag=LDO50_RS05985;old_locus_tag=BVI1335_1330023 NZ_CAJZAO010000039.1 Protein Homology CDS 21448 22059 . - 0 ID=cds-WP_011885984.1;Parent=gene-LDO50_RS05985;Dbxref=GenBank:WP_011885984.1;Name=WP_011885984.1;Ontology_term=GO:0019646,GO:0009486;gbkey=CDS;gene=cyoC;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009935051.1;locus_tag=LDO50_RS05985;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_011885984.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 22059 24071 . - . ID=gene-LDO50_RS05990;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=LDO50_RS05990;old_locus_tag=BVI1335_1330024 NZ_CAJZAO010000039.1 Protein Homology CDS 22059 24071 . - 0 ID=cds-WP_011885985.1;Parent=gene-LDO50_RS05990;Dbxref=GenBank:WP_011885985.1;Name=WP_011885985.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoB;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331750.1;locus_tag=LDO50_RS05990;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_011885985.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 24075 24965 . - . ID=gene-LDO50_RS05995;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=LDO50_RS05995;old_locus_tag=BVI1335_1330025 NZ_CAJZAO010000039.1 Protein Homology CDS 24075 24965 . - 0 ID=cds-WP_014723614.1;Parent=gene-LDO50_RS05995;Dbxref=GenBank:WP_014723614.1;Name=WP_014723614.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoA;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885986.1;locus_tag=LDO50_RS05995;product=ubiquinol oxidase subunit II;protein_id=WP_014723614.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 25480 26247 . - . ID=gene-LDO50_RS06000;Name=LDO50_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06000;old_locus_tag=BVI1335_1330026 NZ_CAJZAO010000039.1 Protein Homology CDS 25480 26247 . - 0 ID=cds-WP_059455749.1;Parent=gene-LDO50_RS06000;Dbxref=GenBank:WP_059455749.1;Name=WP_059455749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406562.1;locus_tag=LDO50_RS06000;product=enoyl-CoA hydratase;protein_id=WP_059455749.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 26339 27538 . - . ID=gene-LDO50_RS06005;Name=LDO50_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06005;old_locus_tag=BVI1335_1330027 NZ_CAJZAO010000039.1 Protein Homology CDS 26339 27538 . - 0 ID=cds-WP_011885988.1;Parent=gene-LDO50_RS06005;Dbxref=GenBank:WP_011885988.1;Name=WP_011885988.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353151.1;locus_tag=LDO50_RS06005;product=acetyl-CoA C-acyltransferase;protein_id=WP_011885988.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 27565 30000 . - . ID=gene-LDO50_RS06010;Name=LDO50_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06010;old_locus_tag=BVI1335_1330028 NZ_CAJZAO010000039.1 Protein Homology CDS 27565 30000 . - 0 ID=cds-WP_224019518.1;Parent=gene-LDO50_RS06010;Dbxref=GenBank:WP_224019518.1;Name=WP_224019518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004537876.1;locus_tag=LDO50_RS06010;product=3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein;protein_id=WP_224019518.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 30114 31901 . - . ID=gene-LDO50_RS06015;Name=LDO50_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06015;old_locus_tag=BVI1335_1330029 NZ_CAJZAO010000039.1 Protein Homology CDS 30114 31901 . - 0 ID=cds-WP_034192699.1;Parent=gene-LDO50_RS06015;Dbxref=GenBank:WP_034192699.1;Name=WP_034192699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017772699.1;locus_tag=LDO50_RS06015;product=acyl-CoA dehydrogenase C-terminal domain-containing protein;protein_id=WP_034192699.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 31959 32558 . - . ID=gene-LDO50_RS06020;Name=LDO50_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06020;old_locus_tag=BVI1335_1330030 NZ_CAJZAO010000039.1 Protein Homology CDS 31959 32558 . - 0 ID=cds-WP_011885991.1;Parent=gene-LDO50_RS06020;Dbxref=GenBank:WP_011885991.1;Name=WP_011885991.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006047961.1;locus_tag=LDO50_RS06020;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011885991.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 32748 34022 . - . ID=gene-LDO50_RS06025;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=LDO50_RS06025;old_locus_tag=BVI1335_1330031 NZ_CAJZAO010000039.1 Protein Homology CDS 32748 34022 . - 0 ID=cds-WP_011885992.1;Parent=gene-LDO50_RS06025;Dbxref=GenBank:WP_011885992.1;Name=WP_011885992.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189031.1;locus_tag=LDO50_RS06025;product=cardiolipin synthase ClsB;protein_id=WP_011885992.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 34019 34513 . - . ID=gene-LDO50_RS06030;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=LDO50_RS06030;old_locus_tag=BVI1335_1330032 NZ_CAJZAO010000039.1 Protein Homology CDS 34019 34513 . - 0 ID=cds-WP_011885993.1;Parent=gene-LDO50_RS06030;Dbxref=GenBank:WP_011885993.1;Name=WP_011885993.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364686.1;locus_tag=LDO50_RS06030;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_011885993.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 34671 36473 . - . ID=gene-LDO50_RS06035;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=LDO50_RS06035;old_locus_tag=BVI1335_1330033 NZ_CAJZAO010000039.1 Protein Homology CDS 34671 36473 . - 0 ID=cds-WP_014723620.1;Parent=gene-LDO50_RS06035;Dbxref=GenBank:WP_014723620.1;Name=WP_014723620.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024571.1;locus_tag=LDO50_RS06035;product=aspartate--tRNA ligase;protein_id=WP_014723620.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq gene 36541 37003 . - . ID=gene-LDO50_RS06040;Name=LDO50_RS06040;end_range=37003,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06040;old_locus_tag=BVI1335_1330034;partial=true NZ_CAJZAO010000039.1 Protein Homology CDS 36541 37003 . - 1 ID=cds-WP_443797725.1;Parent=gene-LDO50_RS06040;Dbxref=GenBank:WP_443797725.1;Name=WP_443797725.1;Ontology_term=GO:0016020;end_range=37003,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024570.1;locus_tag=LDO50_RS06040;partial=true;product=DUF502 domain-containing protein;protein_id=WP_443797725.1;transl_table=11 NZ_CAJZAO010000039.1 RefSeq pseudogene 37014 37198 . - . ID=gene-LDO50_RS31310;Name=LDO50_RS31310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31310;old_locus_tag=BVI1335_1330035;partial=true;pseudo=true;start_range=.,37014 NZ_CAJZAO010000039.1 Protein Homology CDS 37014 37198 . - 0 ID=cds-LDO50_RS31310;Parent=gene-LDO50_RS31310;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024570.1;locus_tag=LDO50_RS31310;partial=true;product=DUF502 domain-containing protein;pseudo=true;start_range=.,37014;transl_table=11 ##sequence-region NZ_CAJZAO010000040.1 1 7666 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000040.1 RefSeq region 1 7666 . + . ID=NZ_CAJZAO010000040.1:1..7666;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_134 NZ_CAJZAO010000040.1 RefSeq gene 1 681 . - . ID=gene-LDO50_RS06045;Name=LDO50_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06045;partial=true;start_range=.,1 NZ_CAJZAO010000040.1 Protein Homology CDS 1 681 . - 0 ID=cds-WP_224019519.1;Parent=gene-LDO50_RS06045;Dbxref=GenBank:WP_224019519.1;Name=WP_224019519.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407079.1;locus_tag=LDO50_RS06045;partial=true;product=tetratricopeptide repeat protein;protein_id=WP_224019519.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000040.1 RefSeq gene 696 2762 . - . ID=gene-LDO50_RS06050;Name=LDO50_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06050;old_locus_tag=BVI1335_1340002 NZ_CAJZAO010000040.1 Protein Homology CDS 696 2762 . - 0 ID=cds-WP_045578744.1;Parent=gene-LDO50_RS06050;Dbxref=GenBank:WP_045578744.1;Name=WP_045578744.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329300.1;locus_tag=LDO50_RS06050;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_045578744.1;transl_table=11 NZ_CAJZAO010000040.1 RefSeq gene 3030 4154 . + . ID=gene-LDO50_RS06055;Name=LDO50_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06055;old_locus_tag=BVI1335_1340004 NZ_CAJZAO010000040.1 Protein Homology CDS 3030 4154 . + 0 ID=cds-WP_011886150.1;Parent=gene-LDO50_RS06055;Dbxref=GenBank:WP_011886150.1;Name=WP_011886150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329299.1;locus_tag=LDO50_RS06055;product=MlaE family lipid ABC transporter permease subunit;protein_id=WP_011886150.1;transl_table=11 NZ_CAJZAO010000040.1 RefSeq gene 4151 5059 . + . ID=gene-LDO50_RS06060;Name=LDO50_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06060;old_locus_tag=BVI1335_1340003 NZ_CAJZAO010000040.1 Protein Homology CDS 4151 5059 . + 0 ID=cds-WP_014723727.1;Parent=gene-LDO50_RS06060;Dbxref=GenBank:WP_014723727.1;Name=WP_014723727.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723727.1;locus_tag=LDO50_RS06060;product=ABC transporter ATP-binding protein;protein_id=WP_014723727.1;transl_table=11 NZ_CAJZAO010000040.1 RefSeq gene 5088 6017 . + . ID=gene-LDO50_RS06065;Name=LDO50_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06065;old_locus_tag=BVI1335_1340005 NZ_CAJZAO010000040.1 Protein Homology CDS 5088 6017 . + 0 ID=cds-WP_011886148.1;Parent=gene-LDO50_RS06065;Dbxref=GenBank:WP_011886148.1;Name=WP_011886148.1;Ontology_term=GO:0015914;gbkey=CDS;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763282.1;locus_tag=LDO50_RS06065;product=MlaD family protein;protein_id=WP_011886148.1;transl_table=11 NZ_CAJZAO010000040.1 RefSeq gene 6136 6759 . + . ID=gene-LDO50_RS06070;Name=LDO50_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06070;old_locus_tag=BVI1335_1340006 NZ_CAJZAO010000040.1 Protein Homology CDS 6136 6759 . + 0 ID=cds-WP_011886147.1;Parent=gene-LDO50_RS06070;Dbxref=GenBank:WP_011886147.1;Name=WP_011886147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886147.1;locus_tag=LDO50_RS06070;product=ABC-type transport auxiliary lipoprotein family protein;protein_id=WP_011886147.1;transl_table=11 NZ_CAJZAO010000040.1 RefSeq gene 6779 7500 . + . ID=gene-LDO50_RS06075;Name=LDO50_RS06075;end_range=7500,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06075;old_locus_tag=BVI1335_1340007;partial=true NZ_CAJZAO010000040.1 Protein Homology CDS 6779 7500 . + 0 ID=cds-WP_443797726.1;Parent=gene-LDO50_RS06075;Dbxref=GenBank:WP_443797726.1;Name=WP_443797726.1;Ontology_term=GO:0046677,GO:0071555,GO:0005576;end_range=7500,.;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_process=response to antibiotic|0046677||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895914.1;locus_tag=LDO50_RS06075;partial=true;product=VanZ family protein;protein_id=WP_443797726.1;transl_table=11 NZ_CAJZAO010000040.1 RefSeq pseudogene 7511 7666 . + . ID=gene-LDO50_RS31315;Name=LDO50_RS31315;end_range=7666,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31315;partial=true;pseudo=true;start_range=.,7511 NZ_CAJZAO010000040.1 Protein Homology CDS 7511 7666 . + 1 ID=cds-LDO50_RS31315;Parent=gene-LDO50_RS31315;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=7666,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407073.1;locus_tag=LDO50_RS31315;partial=true;product=VanZ family protein;pseudo=true;start_range=.,7511;transl_table=11 ##sequence-region NZ_CAJZAO010000041.1 1 30076 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000041.1 RefSeq region 1 30076 . + . ID=NZ_CAJZAO010000041.1:1..30076;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_135 NZ_CAJZAO010000041.1 RefSeq gene 243 1616 . + . ID=gene-LDO50_RS06080;Name=LDO50_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06080;old_locus_tag=BVI1335_1350001 NZ_CAJZAO010000041.1 Protein Homology CDS 243 1616 . + 0 ID=cds-WP_224019520.1;Parent=gene-LDO50_RS06080;Dbxref=GenBank:WP_224019520.1;Name=WP_224019520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885193.1;locus_tag=LDO50_RS06080;product=hypothetical protein;protein_id=WP_224019520.1;transl_table=11 NZ_CAJZAO010000041.1 RefSeq gene 2043 3572 . + . ID=gene-LDO50_RS06085;Name=LDO50_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06085;old_locus_tag=BVI1335_1350002 NZ_CAJZAO010000041.1 Protein Homology CDS 2043 3572 . + 0 ID=cds-WP_014723252.1;Parent=gene-LDO50_RS06085;Dbxref=GenBank:WP_014723252.1;Name=WP_014723252.1;Ontology_term=GO:0015990,GO:0042773,GO:0008137,GO:0048039,GO:0045271;gbkey=CDS;go_component=respiratory chain complex I|0045271||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,ubiquinone binding|0048039||IEA;go_process=electron transport coupled proton transport|0015990||IEA,ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364181.1;locus_tag=LDO50_RS06085;product=complex I subunit 4 family protein;protein_id=WP_014723252.1;transl_table=11 NZ_CAJZAO010000041.1 RefSeq gene 3604 3813 . - . ID=gene-LDO50_RS06090;Name=LDO50_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06090 NZ_CAJZAO010000041.1 GeneMarkS-2+ CDS 3604 3813 . - 0 ID=cds-WP_080484203.1;Parent=gene-LDO50_RS06090;Dbxref=GenBank:WP_080484203.1;Name=WP_080484203.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS06090;product=hypothetical protein;protein_id=WP_080484203.1;transl_table=11 NZ_CAJZAO010000041.1 RefSeq gene 3848 4735 . + . ID=gene-LDO50_RS06095;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=LDO50_RS06095;old_locus_tag=BVI1335_1350004 NZ_CAJZAO010000041.1 Protein Homology CDS 3848 4735 . + 0 ID=cds-WP_011885191.1;Parent=gene-LDO50_RS06095;Dbxref=GenBank:WP_011885191.1;Name=WP_011885191.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoA;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213114.1;locus_tag=LDO50_RS06095;product=ubiquinol oxidase subunit II;protein_id=WP_011885191.1;transl_table=11 NZ_CAJZAO010000041.1 RefSeq gene 4739 6742 . + . ID=gene-LDO50_RS06100;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=LDO50_RS06100;old_locus_tag=BVI1335_1350005 NZ_CAJZAO010000041.1 Protein Homology CDS 4739 6742 . + 0 ID=cds-WP_224019521.1;Parent=gene-LDO50_RS06100;Dbxref=GenBank:WP_224019521.1;Name=WP_224019521.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoB;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331750.1;locus_tag=LDO50_RS06100;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_224019521.1;transl_table=11 NZ_CAJZAO010000041.1 RefSeq gene 6742 7350 . + . ID=gene-LDO50_RS06105;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;locus_tag=LDO50_RS06105;old_locus_tag=BVI1335_1350006 NZ_CAJZAO010000041.1 Protein Homology CDS 6742 7350 . + 0 ID=cds-WP_011885189.1;Parent=gene-LDO50_RS06105;Dbxref=GenBank:WP_011885189.1;Name=WP_011885189.1;Ontology_term=GO:0019646,GO:0009486;gbkey=CDS;gene=cyoC;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657331.1;locus_tag=LDO50_RS06105;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_011885189.1;transl_table=11 NZ_CAJZAO010000041.1 RefSeq gene 7351 7683 . + . ID=gene-LDO50_RS06110;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=LDO50_RS06110;old_locus_tag=BVI1335_1350007 NZ_CAJZAO010000041.1 Protein Homology CDS 7351 7683 . + 0 ID=cds-WP_011885188.1;Parent=gene-LDO50_RS06110;Dbxref=GenBank:WP_011885188.1;Name=WP_011885188.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoD;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352504.1;locus_tag=LDO50_RS06110;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_011885188.1;transl_table=11 NZ_CAJZAO010000041.1 RefSeq gene 8013 8378 . + . ID=gene-LDO50_RS06115;Name=LDO50_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06115;old_locus_tag=BVI1335_1350008 NZ_CAJZAO010000041.1 Protein Homology CDS 8013 8378 . + 0 ID=cds-WP_059456410.1;Parent=gene-LDO50_RS06115;Dbxref=GenBank:WP_059456410.1;Name=WP_059456410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549502.1;locus_tag=LDO50_RS06115;product=hypothetical protein;protein_id=WP_059456410.1;transl_table=11 NZ_CAJZAO010000041.1 RefSeq gene 8713 10596 . + . ID=gene-LDO50_RS06120;Name=LDO50_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06120;old_locus_tag=BVI1335_1350009 NZ_CAJZAO010000041.1 Protein Homology CDS 8713 10596 . + 0 ID=cds-WP_224019522.1;Parent=gene-LDO50_RS06120;Dbxref=GenBank:WP_224019522.1;Name=WP_224019522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885186.1;locus_tag=LDO50_RS06120;product=extracellular solute-binding protein;protein_id=WP_224019522.1;transl_table=11 NZ_CAJZAO010000041.1 RefSeq gene 10649 11692 . + . ID=gene-LDO50_RS06125;Name=LDO50_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06125;old_locus_tag=BVI1335_1350010 NZ_CAJZAO010000041.1 Protein Homology CDS 10649 11692 . + 0 ID=cds-WP_011885185.1;Parent=gene-LDO50_RS06125;Dbxref=GenBank:WP_011885185.1;Name=WP_011885185.1;Ontology_term=GO:0042884,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=microcin transport|0042884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890352.1;locus_tag=LDO50_RS06125;product=microcin C ABC transporter permease YejB;protein_id=WP_011885185.1;transl_table=11 NZ_CAJZAO010000041.1 RefSeq gene 11768 12865 . + . ID=gene-LDO50_RS06130;Name=LDO50_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06130;old_locus_tag=BVI1335_1350012 NZ_CAJZAO010000041.1 Protein Homology CDS 11768 12865 . + 0 ID=cds-WP_011885184.1;Parent=gene-LDO50_RS06130;Dbxref=GenBank:WP_011885184.1;Name=WP_011885184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478449.1;locus_tag=LDO50_RS06130;product=ABC transporter permease;protein_id=WP_011885184.1;transl_table=11 NZ_CAJZAO010000041.1 RefSeq gene 12862 14484 . + . ID=gene-LDO50_RS06135;Name=LDO50_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06135;old_locus_tag=BVI1335_1350011 NZ_CAJZAO010000041.1 Protein Homology CDS 12862 14484 . + 0 ID=cds-WP_011885183.1;Parent=gene-LDO50_RS06135;Dbxref=GenBank:WP_011885183.1;Name=WP_011885183.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885183.1;locus_tag=LDO50_RS06135;product=ABC transporter ATP-binding protein;protein_id=WP_011885183.1;transl_table=11 NZ_CAJZAO010000041.1 RefSeq gene 14614 15285 . + . ID=gene-LDO50_RS06140;Name=LDO50_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06140;old_locus_tag=BVI1335_1350013 NZ_CAJZAO010000041.1 Protein Homology CDS 14614 15285 . + 0 ID=cds-WP_011885182.1;Parent=gene-LDO50_RS06140;Dbxref=GenBank:WP_011885182.1;Name=WP_011885182.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760701.1;locus_tag=LDO50_RS06140;product=C40 family peptidase;protein_id=WP_011885182.1;transl_table=11 NZ_CAJZAO010000041.1 RefSeq gene 15376 16290 . - . ID=gene-LDO50_RS06145;Name=LDO50_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06145;old_locus_tag=BVI1335_1350014 NZ_CAJZAO010000041.1 Protein Homology CDS 15376 16290 . - 0 ID=cds-WP_011885181.1;Parent=gene-LDO50_RS06145;Dbxref=GenBank:WP_011885181.1;Name=WP_011885181.1;Ontology_term=GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364163.1;locus_tag=LDO50_RS06145;product=patatin-like phospholipase family protein;protein_id=WP_011885181.1;transl_table=11 NZ_CAJZAO010000041.1 RefSeq gene 16570 17979 . + . ID=gene-LDO50_RS06150;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=LDO50_RS06150;old_locus_tag=BVI1335_1350015 NZ_CAJZAO010000041.1 Protein Homology CDS 16570 17979 . + 0 ID=cds-WP_011885180.1;Parent=gene-LDO50_RS06150;Dbxref=GenBank:WP_011885180.1;Name=WP_011885180.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723246.1;locus_tag=LDO50_RS06150;product=glutamate--tRNA ligase;protein_id=WP_011885180.1;transl_table=11 NZ_CAJZAO010000041.1 RefSeq gene 18107 18182 . + . ID=gene-LDO50_RS06155;Name=LDO50_RS06155;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS06155;old_locus_tag=BVI1335_TRNA14 NZ_CAJZAO010000041.1 tRNAscan-SE tRNA 18107 18182 . + . ID=rna-LDO50_RS06155;Parent=gene-LDO50_RS06155;anticodon=(pos:18140..18142);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS06155;product=tRNA-Ala NZ_CAJZAO010000041.1 tRNAscan-SE exon 18107 18182 . + . ID=exon-LDO50_RS06155-1;Parent=rna-LDO50_RS06155;anticodon=(pos:18140..18142);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS06155;product=tRNA-Ala NZ_CAJZAO010000041.1 RefSeq gene 18446 18522 . + . ID=gene-LDO50_RS06160;Name=LDO50_RS06160;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS06160;old_locus_tag=BVI1335_TRNA15 NZ_CAJZAO010000041.1 tRNAscan-SE tRNA 18446 18522 . + . ID=rna-LDO50_RS06160;Parent=gene-LDO50_RS06160;anticodon=(pos:18480..18482);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS06160;product=tRNA-Asp NZ_CAJZAO010000041.1 tRNAscan-SE exon 18446 18522 . + . ID=exon-LDO50_RS06160-1;Parent=rna-LDO50_RS06160;anticodon=(pos:18480..18482);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS06160;product=tRNA-Asp NZ_CAJZAO010000041.1 RefSeq gene 18586 18661 . + . ID=gene-LDO50_RS06165;Name=LDO50_RS06165;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS06165;old_locus_tag=BVI1335_TRNA16 NZ_CAJZAO010000041.1 tRNAscan-SE tRNA 18586 18661 . + . ID=rna-LDO50_RS06165;Parent=gene-LDO50_RS06165;anticodon=(pos:18620..18622);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS06165;product=tRNA-Glu NZ_CAJZAO010000041.1 tRNAscan-SE exon 18586 18661 . + . ID=exon-LDO50_RS06165-1;Parent=rna-LDO50_RS06165;anticodon=(pos:18620..18622);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS06165;product=tRNA-Glu NZ_CAJZAO010000041.1 RefSeq gene 18741 18817 . + . ID=gene-LDO50_RS06170;Name=LDO50_RS06170;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS06170;old_locus_tag=BVI1335_TRNA17 NZ_CAJZAO010000041.1 tRNAscan-SE tRNA 18741 18817 . + . ID=rna-LDO50_RS06170;Parent=gene-LDO50_RS06170;anticodon=(pos:18775..18777);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS06170;product=tRNA-Asp NZ_CAJZAO010000041.1 tRNAscan-SE exon 18741 18817 . + . ID=exon-LDO50_RS06170-1;Parent=rna-LDO50_RS06170;anticodon=(pos:18775..18777);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS06170;product=tRNA-Asp NZ_CAJZAO010000041.1 RefSeq gene 18883 18958 . + . ID=gene-LDO50_RS06175;Name=LDO50_RS06175;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS06175;old_locus_tag=BVI1335_TRNA18 NZ_CAJZAO010000041.1 tRNAscan-SE tRNA 18883 18958 . + . ID=rna-LDO50_RS06175;Parent=gene-LDO50_RS06175;anticodon=(pos:18917..18919);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS06175;product=tRNA-Glu NZ_CAJZAO010000041.1 tRNAscan-SE exon 18883 18958 . + . ID=exon-LDO50_RS06175-1;Parent=rna-LDO50_RS06175;anticodon=(pos:18917..18919);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS06175;product=tRNA-Glu NZ_CAJZAO010000041.1 RefSeq gene 19032 19108 . + . ID=gene-LDO50_RS06180;Name=LDO50_RS06180;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS06180;old_locus_tag=BVI1335_TRNA19 NZ_CAJZAO010000041.1 tRNAscan-SE tRNA 19032 19108 . + . ID=rna-LDO50_RS06180;Parent=gene-LDO50_RS06180;anticodon=(pos:19066..19068);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS06180;product=tRNA-Asp NZ_CAJZAO010000041.1 tRNAscan-SE exon 19032 19108 . + . ID=exon-LDO50_RS06180-1;Parent=rna-LDO50_RS06180;anticodon=(pos:19066..19068);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS06180;product=tRNA-Asp NZ_CAJZAO010000041.1 RefSeq gene 19454 19918 . + . ID=gene-LDO50_RS06185;Name=LDO50_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06185;old_locus_tag=BVI1335_1350020 NZ_CAJZAO010000041.1 Protein Homology CDS 19454 19918 . + 0 ID=cds-WP_011885179.1;Parent=gene-LDO50_RS06185;Dbxref=GenBank:WP_011885179.1;Name=WP_011885179.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402608.1;locus_tag=LDO50_RS06185;product=GNAT family N-acetyltransferase;protein_id=WP_011885179.1;transl_table=11 NZ_CAJZAO010000041.1 RefSeq gene 19946 20839 . - . ID=gene-LDO50_RS06190;Name=LDO50_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06190;old_locus_tag=BVI1335_1350021 NZ_CAJZAO010000041.1 Protein Homology CDS 19946 20839 . - 0 ID=cds-WP_011885178.1;Parent=gene-LDO50_RS06190;Dbxref=GenBank:WP_011885178.1;Name=WP_011885178.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885178.1;locus_tag=LDO50_RS06190;product=AraC family transcriptional regulator;protein_id=WP_011885178.1;transl_table=11 NZ_CAJZAO010000041.1 RefSeq gene 21030 21443 . + . ID=gene-LDO50_RS06195;Name=LDO50_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06195;old_locus_tag=BVI1335_1350022 NZ_CAJZAO010000041.1 Protein Homology CDS 21030 21443 . + 0 ID=cds-WP_045578970.1;Parent=gene-LDO50_RS06195;Dbxref=GenBank:WP_045578970.1;Name=WP_045578970.1;Ontology_term=GO:0061929;gbkey=CDS;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657314.1;locus_tag=LDO50_RS06195;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_045578970.1;transl_table=11 NZ_CAJZAO010000041.1 RefSeq gene 21594 23186 . - . ID=gene-LDO50_RS06200;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=LDO50_RS06200;old_locus_tag=BVI1335_1350024 NZ_CAJZAO010000041.1 Protein Homology CDS 21594 23186 . - 0 ID=cds-WP_176321269.1;Parent=gene-LDO50_RS06200;Dbxref=GenBank:WP_176321269.1;Name=WP_176321269.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026029.1;locus_tag=LDO50_RS06200;product=malate synthase A;protein_id=WP_176321269.1;transl_table=11 NZ_CAJZAO010000041.1 RefSeq gene 23254 24015 . - . ID=gene-LDO50_RS06205;Name=LDO50_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06205;old_locus_tag=BVI1335_1350026 NZ_CAJZAO010000041.1 Protein Homology CDS 23254 24015 . - 0 ID=cds-WP_045578971.1;Parent=gene-LDO50_RS06205;Dbxref=GenBank:WP_045578971.1;Name=WP_045578971.1;Ontology_term=GO:0019120;gbkey=CDS;go_function=hydrolase activity%2C acting on acid halide bonds%2C in C-halide compounds|0019120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213122.1;locus_tag=LDO50_RS06205;product=haloacid dehalogenase type II;protein_id=WP_045578971.1;transl_table=11 NZ_CAJZAO010000041.1 RefSeq gene 24173 25078 . + . ID=gene-LDO50_RS06210;Name=LDO50_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06210;old_locus_tag=BVI1335_1350027 NZ_CAJZAO010000041.1 Protein Homology CDS 24173 25078 . + 0 ID=cds-WP_011885174.1;Parent=gene-LDO50_RS06210;Dbxref=GenBank:WP_011885174.1;Name=WP_011885174.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885174.1;locus_tag=LDO50_RS06210;product=LysR family transcriptional regulator;protein_id=WP_011885174.1;transl_table=11 NZ_CAJZAO010000041.1 RefSeq gene 25253 25687 . + . ID=gene-LDO50_RS06215;Name=LDO50_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06215;old_locus_tag=BVI1335_1350028 NZ_CAJZAO010000041.1 Protein Homology CDS 25253 25687 . + 0 ID=cds-WP_011885173.1;Parent=gene-LDO50_RS06215;Dbxref=GenBank:WP_011885173.1;Name=WP_011885173.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007580518.1;locus_tag=LDO50_RS06215;product=universal stress protein;protein_id=WP_011885173.1;transl_table=11 NZ_CAJZAO010000041.1 RefSeq gene 25882 27189 . - . ID=gene-LDO50_RS06220;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=LDO50_RS06220;old_locus_tag=BVI1335_1350029 NZ_CAJZAO010000041.1 Protein Homology CDS 25882 27189 . - 0 ID=cds-WP_014723240.1;Parent=gene-LDO50_RS06220;Dbxref=GenBank:WP_014723240.1;Name=WP_014723240.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009931004.1;locus_tag=LDO50_RS06220;product=isocitrate lyase;protein_id=WP_014723240.1;transl_table=11 NZ_CAJZAO010000041.1 RefSeq gene 27559 29109 . - . ID=gene-LDO50_RS06225;Name=LDO50_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06225;old_locus_tag=BVI1335_1350030 NZ_CAJZAO010000041.1 Protein Homology CDS 27559 29109 . - 0 ID=cds-WP_011885171.1;Parent=gene-LDO50_RS06225;Dbxref=GenBank:WP_011885171.1;Name=WP_011885171.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491421.1;locus_tag=LDO50_RS06225;product=DEAD/DEAH box helicase;protein_id=WP_011885171.1;transl_table=11 NZ_CAJZAO010000041.1 RefSeq gene 29469 29738 . - . ID=gene-LDO50_RS06230;Name=LDO50_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06230;old_locus_tag=BVI1335_1350031 NZ_CAJZAO010000041.1 Protein Homology CDS 29469 29738 . - 0 ID=cds-WP_011885170.1;Parent=gene-LDO50_RS06230;Dbxref=GenBank:WP_011885170.1;Name=WP_011885170.1;Ontology_term=GO:0000062;gbkey=CDS;go_function=fatty-acyl-CoA binding|0000062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763999.1;locus_tag=LDO50_RS06230;product=acyl-CoA-binding protein;protein_id=WP_011885170.1;transl_table=11 NZ_CAJZAO010000041.1 RefSeq pseudogene 29899 30076 . + . ID=gene-LDO50_RS06235;Name=LDO50_RS06235;end_range=30076,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS06235;partial=true;pseudo=true NZ_CAJZAO010000041.1 Protein Homology CDS 29899 30076 . + 0 ID=cds-LDO50_RS06235;Parent=gene-LDO50_RS06235;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=30076,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549519.1;locus_tag=LDO50_RS06235;partial=true;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000042.1 1 15904 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000042.1 RefSeq region 1 15904 . + . ID=NZ_CAJZAO010000042.1:1..15904;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_136 NZ_CAJZAO010000042.1 RefSeq gene 133 259 . - . ID=gene-LDO50_RS31320;Name=LDO50_RS31320;end_range=259,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31320;old_locus_tag=BVI1335_1360002;partial=true NZ_CAJZAO010000042.1 Protein Homology CDS 133 259 . - 1 ID=cds-WP_443797730.1;Parent=gene-LDO50_RS31320;Dbxref=GenBank:WP_443797730.1;Name=WP_443797730.1;end_range=259,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004548949.1;locus_tag=LDO50_RS31320;partial=true;product=DUF3348 family protein;protein_id=WP_443797730.1;transl_table=11 NZ_CAJZAO010000042.1 RefSeq gene 270 690 . - . ID=gene-LDO50_RS06240;Name=LDO50_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06240;partial=true;start_range=.,270 NZ_CAJZAO010000042.1 Protein Homology CDS 270 690 . - 0 ID=cds-WP_443797727.1;Parent=gene-LDO50_RS06240;Dbxref=GenBank:WP_443797727.1;Name=WP_443797727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495608.1;locus_tag=LDO50_RS06240;partial=true;product=DUF3348 family protein;protein_id=WP_443797727.1;start_range=.,270;transl_table=11 NZ_CAJZAO010000042.1 RefSeq gene 1024 1662 . - . ID=gene-LDO50_RS06245;Name=LDO50_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06245;old_locus_tag=BVI1335_1360004 NZ_CAJZAO010000042.1 Protein Homology CDS 1024 1662 . - 0 ID=cds-WP_011881420.1;Parent=gene-LDO50_RS06245;Dbxref=GenBank:WP_011881420.1;Name=WP_011881420.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338617.1;locus_tag=LDO50_RS06245;product=LysE family translocator;protein_id=WP_011881420.1;transl_table=11 NZ_CAJZAO010000042.1 RefSeq gene 1889 3265 . + . ID=gene-LDO50_RS06250;Name=LDO50_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06250;old_locus_tag=BVI1335_1360005 NZ_CAJZAO010000042.1 Protein Homology CDS 1889 3265 . + 0 ID=cds-WP_011881419.1;Parent=gene-LDO50_RS06250;Dbxref=GenBank:WP_011881419.1;Name=WP_011881419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356056.1;locus_tag=LDO50_RS06250;product=FAD-containing oxidoreductase;protein_id=WP_011881419.1;transl_table=11 NZ_CAJZAO010000042.1 RefSeq gene 3510 4403 . - . ID=gene-LDO50_RS06255;Name=LDO50_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06255;old_locus_tag=BVI1335_1360006 NZ_CAJZAO010000042.1 Protein Homology CDS 3510 4403 . - 0 ID=cds-WP_224019523.1;Parent=gene-LDO50_RS06255;Dbxref=GenBank:WP_224019523.1;Name=WP_224019523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548354.1;locus_tag=LDO50_RS06255;product=SDR family oxidoreductase;protein_id=WP_224019523.1;transl_table=11 NZ_CAJZAO010000042.1 RefSeq gene 4499 5356 . + . ID=gene-LDO50_RS06260;Name=LDO50_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06260;old_locus_tag=BVI1335_1360007 NZ_CAJZAO010000042.1 Protein Homology CDS 4499 5356 . + 0 ID=cds-WP_014724503.1;Parent=gene-LDO50_RS06260;Dbxref=GenBank:WP_014724503.1;Name=WP_014724503.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881417.1;locus_tag=LDO50_RS06260;product=helix-turn-helix transcriptional regulator;protein_id=WP_014724503.1;transl_table=11 NZ_CAJZAO010000042.1 RefSeq gene 5516 6772 . + . ID=gene-LDO50_RS06265;Name=LDO50_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06265;old_locus_tag=BVI1335_1360008 NZ_CAJZAO010000042.1 Protein Homology CDS 5516 6772 . + 0 ID=cds-WP_212152509.1;Parent=gene-LDO50_RS06265;Dbxref=GenBank:WP_212152509.1;Name=WP_212152509.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881416.1;locus_tag=LDO50_RS06265;product=cyanate transporter;protein_id=WP_212152509.1;transl_table=11 NZ_CAJZAO010000042.1 RefSeq gene 6872 7159 . - . ID=gene-LDO50_RS06270;Name=LDO50_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06270 NZ_CAJZAO010000042.1 Protein Homology CDS 6872 7159 . - 0 ID=cds-WP_011881415.1;Parent=gene-LDO50_RS06270;Dbxref=GenBank:WP_011881415.1;Name=WP_011881415.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724501.1;locus_tag=LDO50_RS06270;product=PAAR domain-containing protein;protein_id=WP_011881415.1;transl_table=11 NZ_CAJZAO010000042.1 RefSeq pseudogene 7208 8026 . - . ID=gene-LDO50_RS06275;Name=LDO50_RS06275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS06275;old_locus_tag=BVI1335_1360011;partial=true;pseudo=true;start_range=.,7208 NZ_CAJZAO010000042.1 Protein Homology CDS 7208 8026 . - 0 ID=cds-LDO50_RS06275;Parent=gene-LDO50_RS06275;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011003929.1;locus_tag=LDO50_RS06275;partial=true;product=DUF6396 domain-containing protein;pseudo=true;start_range=.,7208;transl_table=11 NZ_CAJZAO010000042.1 RefSeq gene 8535 10097 . + . ID=gene-LDO50_RS06280;Name=LDO50_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06280;old_locus_tag=BVI1335_1360013 NZ_CAJZAO010000042.1 Protein Homology CDS 8535 10097 . + 0 ID=cds-WP_059607686.1;Parent=gene-LDO50_RS06280;Dbxref=GenBank:WP_059607686.1;Name=WP_059607686.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759613.1;locus_tag=LDO50_RS06280;product=methyl-accepting chemotaxis protein;protein_id=WP_059607686.1;transl_table=11 NZ_CAJZAO010000042.1 RefSeq gene 10203 11078 . - . ID=gene-LDO50_RS06285;Name=LDO50_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06285;old_locus_tag=BVI1335_1360014 NZ_CAJZAO010000042.1 Protein Homology CDS 10203 11078 . - 0 ID=cds-WP_011881412.1;Parent=gene-LDO50_RS06285;Dbxref=GenBank:WP_011881412.1;Name=WP_011881412.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881412.1;locus_tag=LDO50_RS06285;product=IclR family transcriptional regulator;protein_id=WP_011881412.1;transl_table=11 NZ_CAJZAO010000042.1 RefSeq gene 11373 12455 . + . ID=gene-LDO50_RS06290;Name=LDO50_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06290;old_locus_tag=BVI1335_1360016 NZ_CAJZAO010000042.1 Protein Homology CDS 11373 12455 . + 0 ID=cds-WP_034194912.1;Parent=gene-LDO50_RS06290;Dbxref=GenBank:WP_034194912.1;Name=WP_034194912.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759615.1;locus_tag=LDO50_RS06290;product=ABC transporter ATP-binding protein;protein_id=WP_034194912.1;transl_table=11 NZ_CAJZAO010000042.1 RefSeq gene 12456 13439 . + . ID=gene-LDO50_RS06295;Name=LDO50_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06295;old_locus_tag=BVI1335_1360017 NZ_CAJZAO010000042.1 Protein Homology CDS 12456 13439 . + 0 ID=cds-WP_059889744.1;Parent=gene-LDO50_RS06295;Dbxref=GenBank:WP_059889744.1;Name=WP_059889744.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365423.1;locus_tag=LDO50_RS06295;product=ABC transporter permease;protein_id=WP_059889744.1;transl_table=11 NZ_CAJZAO010000042.1 RefSeq gene 13436 14230 . + . ID=gene-LDO50_RS06300;Name=LDO50_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06300;old_locus_tag=BVI1335_1360015 NZ_CAJZAO010000042.1 Protein Homology CDS 13436 14230 . + 0 ID=cds-WP_011881409.1;Parent=gene-LDO50_RS06300;Dbxref=GenBank:WP_011881409.1;Name=WP_011881409.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020068159.1;locus_tag=LDO50_RS06300;product=ABC transporter permease;protein_id=WP_011881409.1;transl_table=11 NZ_CAJZAO010000042.1 RefSeq gene 14230 14580 . + . ID=gene-LDO50_RS06305;Name=LDO50_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06305;old_locus_tag=BVI1335_1360018 NZ_CAJZAO010000042.1 Protein Homology CDS 14230 14580 . + 0 ID=cds-WP_224019524.1;Parent=gene-LDO50_RS06305;Dbxref=GenBank:WP_224019524.1;Name=WP_224019524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495622.1;locus_tag=LDO50_RS06305;product=(2Fe-2S)-binding protein;protein_id=WP_224019524.1;transl_table=11 NZ_CAJZAO010000042.1 RefSeq gene 14577 15684 . + . ID=gene-LDO50_RS06310;Name=LDO50_RS06310;end_range=15684,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06310;old_locus_tag=BVI1335_1360019;partial=true NZ_CAJZAO010000042.1 Protein Homology CDS 14577 15684 . + 0 ID=cds-WP_443797728.1;Parent=gene-LDO50_RS06310;Dbxref=GenBank:WP_443797728.1;Name=WP_443797728.1;Ontology_term=GO:0016491;end_range=15684,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413190.1;locus_tag=LDO50_RS06310;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_443797728.1;transl_table=11 NZ_CAJZAO010000042.1 RefSeq gene 15695 15904 . + . ID=gene-LDO50_RS31325;Name=LDO50_RS31325;end_range=15904,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31325;partial=true;start_range=.,15695 NZ_CAJZAO010000042.1 Protein Homology CDS 15695 15904 . + 0 ID=cds-WP_443797729.1;Parent=gene-LDO50_RS31325;Dbxref=GenBank:WP_443797729.1;Name=WP_443797729.1;end_range=15904,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493143.1;locus_tag=LDO50_RS31325;partial=true;product=(2Fe-2S)-binding protein;protein_id=WP_443797729.1;start_range=.,15695;transl_table=11 ##sequence-region NZ_CAJZAO010000043.1 1 23181 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000043.1 RefSeq region 1 23181 . + . ID=NZ_CAJZAO010000043.1:1..23181;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_137 NZ_CAJZAO010000043.1 RefSeq gene 1 501 . - . ID=gene-LDO50_RS06315;Name=LDO50_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06315;partial=true;start_range=.,1 NZ_CAJZAO010000043.1 Protein Homology CDS 1 501 . - 0 ID=cds-WP_224019525.1;Parent=gene-LDO50_RS06315;Dbxref=GenBank:WP_224019525.1;Name=WP_224019525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397495.1;locus_tag=LDO50_RS06315;partial=true;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_224019525.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000043.1 RefSeq gene 553 1578 . - . ID=gene-LDO50_RS06320;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=LDO50_RS06320;old_locus_tag=BVI1335_1370002 NZ_CAJZAO010000043.1 Protein Homology CDS 553 1578 . - 0 ID=cds-WP_046428256.1;Parent=gene-LDO50_RS06320;Dbxref=GenBank:WP_046428256.1;Name=WP_046428256.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=araH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397496.1;locus_tag=LDO50_RS06320;product=L-arabinose ABC transporter permease AraH;protein_id=WP_046428256.1;transl_table=11 NZ_CAJZAO010000043.1 RefSeq gene 1672 3234 . - . ID=gene-LDO50_RS06325;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=LDO50_RS06325;old_locus_tag=BVI1335_1370003 NZ_CAJZAO010000043.1 Protein Homology CDS 1672 3234 . - 0 ID=cds-WP_041494252.1;Parent=gene-LDO50_RS06325;Dbxref=GenBank:WP_041494252.1;Name=WP_041494252.1;Ontology_term=GO:0042882,GO:0005524,GO:0015612,GO:0016020;gbkey=CDS;gene=araG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type L-arabinose transporter activity|0015612||IEA;go_process=L-arabinose transmembrane transport|0042882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404694.1;locus_tag=LDO50_RS06325;product=L-arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_041494252.1;transl_table=11 NZ_CAJZAO010000043.1 RefSeq gene 3255 4259 . - . ID=gene-LDO50_RS06330;Name=LDO50_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06330;old_locus_tag=BVI1335_1370004 NZ_CAJZAO010000043.1 Protein Homology CDS 3255 4259 . - 0 ID=cds-WP_014724284.1;Parent=gene-LDO50_RS06330;Dbxref=GenBank:WP_014724284.1;Name=WP_014724284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758832.1;locus_tag=LDO50_RS06330;product=arabinose ABC transporter substrate-binding protein;protein_id=WP_014724284.1;transl_table=11 NZ_CAJZAO010000043.1 RefSeq gene 4340 5269 . - . ID=gene-LDO50_RS06335;Name=LDO50_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06335;old_locus_tag=BVI1335_1370005 NZ_CAJZAO010000043.1 Protein Homology CDS 4340 5269 . - 0 ID=cds-WP_011881177.1;Parent=gene-LDO50_RS06335;Dbxref=GenBank:WP_011881177.1;Name=WP_011881177.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750188.1;locus_tag=LDO50_RS06335;product=Gfo/Idh/MocA family protein;protein_id=WP_011881177.1;transl_table=11 NZ_CAJZAO010000043.1 RefSeq gene 5294 6223 . - . ID=gene-LDO50_RS06340;Name=LDO50_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06340;old_locus_tag=BVI1335_1370006 NZ_CAJZAO010000043.1 Protein Homology CDS 5294 6223 . - 0 ID=cds-WP_212182862.1;Parent=gene-LDO50_RS06340;Dbxref=GenBank:WP_212182862.1;Name=WP_212182862.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881176.1;locus_tag=LDO50_RS06340;product=dihydrodipicolinate synthase family protein;protein_id=WP_212182862.1;transl_table=11 NZ_CAJZAO010000043.1 RefSeq gene 6274 7632 . - . ID=gene-LDO50_RS06345;Name=LDO50_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06345;old_locus_tag=BVI1335_1370007 NZ_CAJZAO010000043.1 Protein Homology CDS 6274 7632 . - 0 ID=cds-WP_034193744.1;Parent=gene-LDO50_RS06345;Dbxref=GenBank:WP_034193744.1;Name=WP_034193744.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367127.1;locus_tag=LDO50_RS06345;product=MFS transporter;protein_id=WP_034193744.1;transl_table=11 NZ_CAJZAO010000043.1 RefSeq gene 7790 9541 . - . ID=gene-LDO50_RS06350;Name=LDO50_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06350;old_locus_tag=BVI1335_1370008 NZ_CAJZAO010000043.1 Protein Homology CDS 7790 9541 . - 0 ID=cds-WP_011881174.1;Parent=gene-LDO50_RS06350;Dbxref=GenBank:WP_011881174.1;Name=WP_011881174.1;Ontology_term=GO:0016836,GO:0051536;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494293.1;locus_tag=LDO50_RS06350;product=IlvD/Edd family dehydratase;protein_id=WP_011881174.1;transl_table=11 NZ_CAJZAO010000043.1 RefSeq gene 9656 10606 . + . ID=gene-LDO50_RS06355;Name=LDO50_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06355;old_locus_tag=BVI1335_1370009 NZ_CAJZAO010000043.1 Protein Homology CDS 9656 10606 . + 0 ID=cds-WP_011881173.1;Parent=gene-LDO50_RS06355;Dbxref=GenBank:WP_011881173.1;Name=WP_011881173.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881173.1;locus_tag=LDO50_RS06355;product=LysR family transcriptional regulator;protein_id=WP_011881173.1;transl_table=11 NZ_CAJZAO010000043.1 RefSeq gene 10699 11175 . - . ID=gene-LDO50_RS06360;Name=LDO50_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06360;old_locus_tag=BVI1335_1370010 NZ_CAJZAO010000043.1 Protein Homology CDS 10699 11175 . - 0 ID=cds-WP_034193745.1;Parent=gene-LDO50_RS06360;Dbxref=GenBank:WP_034193745.1;Name=WP_034193745.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750183.1;locus_tag=LDO50_RS06360;product=OsmC family protein;protein_id=WP_034193745.1;transl_table=11 NZ_CAJZAO010000043.1 RefSeq gene 11665 12699 . - . ID=gene-LDO50_RS06370;Name=LDO50_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06370;old_locus_tag=BVI1335_1370012 NZ_CAJZAO010000043.1 Protein Homology CDS 11665 12699 . - 0 ID=cds-WP_014724278.1;Parent=gene-LDO50_RS06370;Dbxref=GenBank:WP_014724278.1;Name=WP_014724278.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724278.1;locus_tag=LDO50_RS06370;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_014724278.1;transl_table=11 NZ_CAJZAO010000043.1 RefSeq gene 12890 14038 . + . ID=gene-LDO50_RS06375;Name=LDO50_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06375;old_locus_tag=BVI1335_1370013 NZ_CAJZAO010000043.1 Protein Homology CDS 12890 14038 . + 0 ID=cds-WP_060121468.1;Parent=gene-LDO50_RS06375;Dbxref=GenBank:WP_060121468.1;Name=WP_060121468.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659870.1;locus_tag=LDO50_RS06375;product=ABC transporter ATP-binding protein;protein_id=WP_060121468.1;transl_table=11 NZ_CAJZAO010000043.1 RefSeq gene 14048 16027 . + . ID=gene-LDO50_RS06380;Name=LDO50_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06380;old_locus_tag=BVI1335_1370014 NZ_CAJZAO010000043.1 Protein Homology CDS 14048 16027 . + 0 ID=cds-WP_059992340.1;Parent=gene-LDO50_RS06380;Dbxref=GenBank:WP_059992340.1;Name=WP_059992340.1;Ontology_term=GO:0006012,GO:0004565,GO:0046872,GO:0009341;gbkey=CDS;go_component=beta-galactosidase complex|0009341||IEA;go_function=beta-galactosidase activity|0004565||IEA,metal ion binding|0046872||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724277.1;locus_tag=LDO50_RS06380;product=beta-galactosidase;protein_id=WP_059992340.1;transl_table=11 NZ_CAJZAO010000043.1 RefSeq gene 16086 17345 . + . ID=gene-LDO50_RS06385;Name=LDO50_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06385;old_locus_tag=BVI1335_1370015 NZ_CAJZAO010000043.1 Protein Homology CDS 16086 17345 . + 0 ID=cds-WP_014724276.1;Parent=gene-LDO50_RS06385;Dbxref=GenBank:WP_014724276.1;Name=WP_014724276.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413331.1;locus_tag=LDO50_RS06385;product=ABC transporter substrate-binding protein;protein_id=WP_014724276.1;transl_table=11 NZ_CAJZAO010000043.1 RefSeq gene 17404 18360 . + . ID=gene-LDO50_RS06390;Name=LDO50_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06390;old_locus_tag=BVI1335_1370017 NZ_CAJZAO010000043.1 Protein Homology CDS 17404 18360 . + 0 ID=cds-WP_059622416.1;Parent=gene-LDO50_RS06390;Dbxref=GenBank:WP_059622416.1;Name=WP_059622416.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339092.1;locus_tag=LDO50_RS06390;product=carbohydrate ABC transporter permease;protein_id=WP_059622416.1;transl_table=11 NZ_CAJZAO010000043.1 RefSeq gene 18381 19232 . + . ID=gene-LDO50_RS06395;Name=LDO50_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06395;old_locus_tag=BVI1335_1370016 NZ_CAJZAO010000043.1 Protein Homology CDS 18381 19232 . + 0 ID=cds-WP_011881166.1;Parent=gene-LDO50_RS06395;Dbxref=GenBank:WP_011881166.1;Name=WP_011881166.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024176.1;locus_tag=LDO50_RS06395;product=carbohydrate ABC transporter permease;protein_id=WP_011881166.1;transl_table=11 NZ_CAJZAO010000043.1 RefSeq gene 19492 20172 . - . ID=gene-LDO50_RS06400;Name=LDO50_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06400;old_locus_tag=BVI1335_1370018 NZ_CAJZAO010000043.1 GeneMarkS-2+ CDS 19492 20172 . - 0 ID=cds-WP_011881164.1;Parent=gene-LDO50_RS06400;Dbxref=GenBank:WP_011881164.1;Name=WP_011881164.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS06400;product=hypothetical protein;protein_id=WP_011881164.1;transl_table=11 NZ_CAJZAO010000043.1 RefSeq gene 20575 20763 . - . ID=gene-LDO50_RS06405;Name=LDO50_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06405;old_locus_tag=BVI1335_1370020 NZ_CAJZAO010000043.1 Protein Homology CDS 20575 20763 . - 0 ID=cds-WP_014724274.1;Parent=gene-LDO50_RS06405;Dbxref=GenBank:WP_014724274.1;Name=WP_014724274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724274.1;locus_tag=LDO50_RS06405;product=hypothetical protein;protein_id=WP_014724274.1;transl_table=11 NZ_CAJZAO010000043.1 RefSeq gene 20940 22403 . - . ID=gene-LDO50_RS06410;Name=LDO50_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06410;old_locus_tag=BVI1335_1370021 NZ_CAJZAO010000043.1 Protein Homology CDS 20940 22403 . - 0 ID=cds-WP_224019527.1;Parent=gene-LDO50_RS06410;Dbxref=GenBank:WP_224019527.1;Name=WP_224019527.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724273.1;locus_tag=LDO50_RS06410;product=DEAD/DEAH box helicase;protein_id=WP_224019527.1;transl_table=11 NZ_CAJZAO010000043.1 RefSeq gene 22473 23181 . - . ID=gene-LDO50_RS06415;Name=LDO50_RS06415;end_range=23181,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06415;old_locus_tag=BVI1335_1370022;partial=true NZ_CAJZAO010000043.1 Protein Homology CDS 22473 23181 . - 1 ID=cds-WP_224019528.1;Parent=gene-LDO50_RS06415;Dbxref=GenBank:WP_224019528.1;Name=WP_224019528.1;end_range=23181,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493975.1;locus_tag=LDO50_RS06415;partial=true;product=DUF6306 domain-containing protein;protein_id=WP_224019528.1;transl_table=11 ##sequence-region NZ_CAJZAO010000044.1 1 17637 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000044.1 RefSeq region 1 17637 . + . ID=NZ_CAJZAO010000044.1:1..17637;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_138 NZ_CAJZAO010000044.1 RefSeq gene 183 1091 . + . ID=gene-LDO50_RS06420;Name=LDO50_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06420;old_locus_tag=BVI1335_1380002;partial=true;start_range=.,183 NZ_CAJZAO010000044.1 Protein Homology CDS 183 1091 . + 0 ID=cds-WP_443797731.1;Parent=gene-LDO50_RS06420;Dbxref=GenBank:WP_443797731.1;Name=WP_443797731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498597.1;locus_tag=LDO50_RS06420;partial=true;product=thioredoxin family protein;protein_id=WP_443797731.1;start_range=.,183;transl_table=11 NZ_CAJZAO010000044.1 RefSeq gene 1176 1919 . + . ID=gene-LDO50_RS06425;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=LDO50_RS06425;old_locus_tag=BVI1335_1380003 NZ_CAJZAO010000044.1 Protein Homology CDS 1176 1919 . + 0 ID=cds-WP_176295791.1;Parent=gene-LDO50_RS06425;Dbxref=GenBank:WP_176295791.1;Name=WP_176295791.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879673.1;locus_tag=LDO50_RS06425;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_176295791.1;transl_table=11 NZ_CAJZAO010000044.1 RefSeq gene 2112 3233 . + . ID=gene-LDO50_RS06430;Name=LDO50_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06430;old_locus_tag=BVI1335_1380004 NZ_CAJZAO010000044.1 Protein Homology CDS 2112 3233 . + 0 ID=cds-WP_014725531.1;Parent=gene-LDO50_RS06430;Dbxref=GenBank:WP_014725531.1;Name=WP_014725531.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760703.1;locus_tag=LDO50_RS06430;product=aromatic ring-hydroxylating oxygenase subunit alpha;protein_id=WP_014725531.1;transl_table=11 NZ_CAJZAO010000044.1 RefSeq gene 3272 4729 . - . ID=gene-LDO50_RS06435;Name=hydA;gbkey=Gene;gene=hydA;gene_biotype=protein_coding;locus_tag=LDO50_RS06435;old_locus_tag=BVI1335_1380005 NZ_CAJZAO010000044.1 Protein Homology CDS 3272 4729 . - 0 ID=cds-WP_034194336.1;Parent=gene-LDO50_RS06435;Dbxref=GenBank:WP_034194336.1;Name=WP_034194336.1;Ontology_term=GO:0008152,GO:0004157,GO:0005737;gbkey=CDS;gene=hydA;go_component=cytoplasm|0005737||IEA;go_function=dihydropyrimidinase activity|0004157||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402886.1;locus_tag=LDO50_RS06435;product=dihydropyrimidinase;protein_id=WP_034194336.1;transl_table=11 NZ_CAJZAO010000044.1 RefSeq gene 4785 6293 . - . ID=gene-LDO50_RS06440;Name=LDO50_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06440;old_locus_tag=BVI1335_1380006 NZ_CAJZAO010000044.1 Protein Homology CDS 4785 6293 . - 0 ID=cds-WP_059457124.1;Parent=gene-LDO50_RS06440;Dbxref=GenBank:WP_059457124.1;Name=WP_059457124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753680.1;locus_tag=LDO50_RS06440;product=NCS1 family nucleobase:cation symporter-1;protein_id=WP_059457124.1;transl_table=11 NZ_CAJZAO010000044.1 RefSeq gene 6391 7698 . - . ID=gene-LDO50_RS06445;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=LDO50_RS06445;old_locus_tag=BVI1335_1380008 NZ_CAJZAO010000044.1 Protein Homology CDS 6391 7698 . - 0 ID=cds-WP_014725528.1;Parent=gene-LDO50_RS06445;Dbxref=GenBank:WP_014725528.1;Name=WP_014725528.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335435.1;locus_tag=LDO50_RS06445;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_014725528.1;transl_table=11 NZ_CAJZAO010000044.1 RefSeq gene 7798 9135 . - . ID=gene-LDO50_RS06450;Name=LDO50_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06450;old_locus_tag=BVI1335_1380009 NZ_CAJZAO010000044.1 Protein Homology CDS 7798 9135 . - 0 ID=cds-WP_224019529.1;Parent=gene-LDO50_RS06450;Dbxref=GenBank:WP_224019529.1;Name=WP_224019529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725527.1;locus_tag=LDO50_RS06450;product=NAD(P)-dependent oxidoreductase;protein_id=WP_224019529.1;transl_table=11 NZ_CAJZAO010000044.1 RefSeq gene 9262 10542 . - . ID=gene-LDO50_RS06455;Name=LDO50_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06455;old_locus_tag=BVI1335_1380010 NZ_CAJZAO010000044.1 Protein Homology CDS 9262 10542 . - 0 ID=cds-WP_224019530.1;Parent=gene-LDO50_RS06455;Dbxref=GenBank:WP_224019530.1;Name=WP_224019530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065405.1;locus_tag=LDO50_RS06455;product=Zn-dependent hydrolase;protein_id=WP_224019530.1;transl_table=11 NZ_CAJZAO010000044.1 RefSeq gene 10917 11603 . + . ID=gene-LDO50_RS06460;Name=LDO50_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06460;old_locus_tag=BVI1335_1380012 NZ_CAJZAO010000044.1 Protein Homology CDS 10917 11603 . + 0 ID=cds-WP_011879666.1;Parent=gene-LDO50_RS06460;Dbxref=GenBank:WP_011879666.1;Name=WP_011879666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725524.1;locus_tag=LDO50_RS06460;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011879666.1;transl_table=11 NZ_CAJZAO010000044.1 RefSeq gene 11718 12908 . - . ID=gene-LDO50_RS06465;Name=LDO50_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06465;old_locus_tag=BVI1335_1380013 NZ_CAJZAO010000044.1 Protein Homology CDS 11718 12908 . - 0 ID=cds-WP_059549115.1;Parent=gene-LDO50_RS06465;Dbxref=GenBank:WP_059549115.1;Name=WP_059549115.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660855.1;locus_tag=LDO50_RS06465;product=acetyl-CoA C-acetyltransferase;protein_id=WP_059549115.1;transl_table=11 NZ_CAJZAO010000044.1 RefSeq gene 12932 13699 . - . ID=gene-LDO50_RS06470;Name=LDO50_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06470;old_locus_tag=BVI1335_1380014 NZ_CAJZAO010000044.1 Protein Homology CDS 12932 13699 . - 0 ID=cds-WP_224019531.1;Parent=gene-LDO50_RS06470;Dbxref=GenBank:WP_224019531.1;Name=WP_224019531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483642.1;locus_tag=LDO50_RS06470;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_224019531.1;transl_table=11 NZ_CAJZAO010000044.1 RefSeq gene 13733 15400 . - . ID=gene-LDO50_RS06475;Name=LDO50_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06475;old_locus_tag=BVI1335_1380015 NZ_CAJZAO010000044.1 Protein Homology CDS 13733 15400 . - 0 ID=cds-WP_224019532.1;Parent=gene-LDO50_RS06475;Dbxref=GenBank:WP_224019532.1;Name=WP_224019532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879663.1;locus_tag=LDO50_RS06475;product=acyl-CoA synthetase;protein_id=WP_224019532.1;transl_table=11 NZ_CAJZAO010000044.1 RefSeq gene 15539 16552 . + . ID=gene-LDO50_RS06480;Name=LDO50_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06480;old_locus_tag=BVI1335_1380016 NZ_CAJZAO010000044.1 Protein Homology CDS 15539 16552 . + 0 ID=cds-WP_176295786.1;Parent=gene-LDO50_RS06480;Dbxref=GenBank:WP_176295786.1;Name=WP_176295786.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725520.1;locus_tag=LDO50_RS06480;product=AraC family transcriptional regulator;protein_id=WP_176295786.1;transl_table=11 NZ_CAJZAO010000044.1 RefSeq gene 16920 17297 . + . ID=gene-LDO50_RS06485;Name=LDO50_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06485;old_locus_tag=BVI1335_1380017 NZ_CAJZAO010000044.1 Protein Homology CDS 16920 17297 . + 0 ID=cds-WP_224019533.1;Parent=gene-LDO50_RS06485;Dbxref=GenBank:WP_224019533.1;Name=WP_224019533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725519.1;locus_tag=LDO50_RS06485;product=nuclear transport factor 2 family protein;protein_id=WP_224019533.1;transl_table=11 NZ_CAJZAO010000044.1 RefSeq gene 17537 17637 . - . ID=gene-LDO50_RS06490;Name=rrf;end_range=17637,.;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LDO50_RS06490;old_locus_tag=BVI1335_RRNA1;partial=true NZ_CAJZAO010000044.1 cmsearch rRNA 17537 17637 . - . ID=rna-LDO50_RS06490;Parent=gene-LDO50_RS06490;Dbxref=RFAM:RF00001;end_range=17637,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO50_RS06490;partial=true;product=5S ribosomal RNA NZ_CAJZAO010000044.1 cmsearch exon 17537 17637 . - . ID=exon-LDO50_RS06490-1;Parent=rna-LDO50_RS06490;Dbxref=RFAM:RF00001;end_range=17637,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO50_RS06490;partial=true;product=5S ribosomal RNA ##sequence-region NZ_CAJZAO010000045.1 1 33905 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000045.1 RefSeq region 1 33905 . + . ID=NZ_CAJZAO010000045.1:1..33905;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_139 NZ_CAJZAO010000045.1 RefSeq gene 1 193 . - . ID=gene-LDO50_RS31330;Name=LDO50_RS31330;end_range=193,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31330;partial=true;start_range=.,1 NZ_CAJZAO010000045.1 Protein Homology CDS 1 193 . - 0 ID=cds-WP_443797732.1;Parent=gene-LDO50_RS31330;Dbxref=GenBank:WP_443797732.1;Name=WP_443797732.1;Ontology_term=GO:0018193;end_range=193,.;gbkey=CDS;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194983.1;locus_tag=LDO50_RS31330;partial=true;product=aspartyl/asparaginyl beta-hydroxylase domain-containing protein;protein_id=WP_443797732.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 204 637 . - . ID=gene-LDO50_RS06495;Name=LDO50_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06495;old_locus_tag=BVI1335_1390002;partial=true;start_range=.,204 NZ_CAJZAO010000045.1 Protein Homology CDS 204 637 . - 0 ID=cds-WP_443797733.1;Parent=gene-LDO50_RS06495;Dbxref=GenBank:WP_443797733.1;Name=WP_443797733.1;Ontology_term=GO:0018193;gbkey=CDS;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007836098.1;locus_tag=LDO50_RS06495;partial=true;product=aspartyl/asparaginyl beta-hydroxylase domain-containing protein;protein_id=WP_443797733.1;start_range=.,204;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 847 1401 . - . ID=gene-LDO50_RS06500;Name=LDO50_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06500;old_locus_tag=BVI1335_1390003 NZ_CAJZAO010000045.1 Protein Homology CDS 847 1401 . - 0 ID=cds-WP_059455256.1;Parent=gene-LDO50_RS06500;Dbxref=GenBank:WP_059455256.1;Name=WP_059455256.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486233.1;locus_tag=LDO50_RS06500;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_059455256.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 1427 2761 . - . ID=gene-LDO50_RS06505;Name=LDO50_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06505;old_locus_tag=BVI1335_1390004 NZ_CAJZAO010000045.1 Protein Homology CDS 1427 2761 . - 0 ID=cds-WP_059459889.1;Parent=gene-LDO50_RS06505;Dbxref=GenBank:WP_059459889.1;Name=WP_059459889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355554.1;locus_tag=LDO50_RS06505;product=aspartate aminotransferase family protein;protein_id=WP_059459889.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq pseudogene 2777 3055 . - . ID=gene-LDO50_RS06510;Name=LDO50_RS06510;end_range=3055,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS06510;old_locus_tag=BVI1335_1390005;partial=true;pseudo=true NZ_CAJZAO010000045.1 Protein Homology CDS 2777 3055 . - 0 ID=cds-LDO50_RS06510;Parent=gene-LDO50_RS06510;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3055,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547979.1;locus_tag=LDO50_RS06510;partial=true;product=peptidase C45;pseudo=true;transl_table=11 NZ_CAJZAO010000045.1 RefSeq pseudogene 3048 3590 . - . ID=gene-LDO50_RS06515;Name=LDO50_RS06515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS06515;old_locus_tag=BVI1335_1390006;partial=true;pseudo=true;start_range=.,3048 NZ_CAJZAO010000045.1 Protein Homology CDS 3048 3590 . - 0 ID=cds-LDO50_RS06515;Parent=gene-LDO50_RS06515;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538020.1;locus_tag=LDO50_RS06515;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;start_range=.,3048;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 3587 4084 . - . ID=gene-LDO50_RS06520;Name=LDO50_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06520;old_locus_tag=BVI1335_1390007 NZ_CAJZAO010000045.1 Protein Homology CDS 3587 4084 . - 0 ID=cds-WP_176300424.1;Parent=gene-LDO50_RS06520;Dbxref=GenBank:WP_176300424.1;Name=WP_176300424.1;Note=The N-terminal region of this protein%2C as described by TIGR01726%2C is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits%2C which specificities that include histidine%2C arginine%2C glutamine%2C glutamate%2C L-cystine (sic)%2C the opines (in Agrobacterium) octopine and nopaline%2C etc.;Ontology_term=GO:0015837,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547981.1;locus_tag=LDO50_RS06520;product=ABC transporter permease subunit;protein_id=WP_176300424.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq pseudogene 4094 4830 . - . ID=gene-LDO50_RS06525;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=pseudogene;locus_tag=LDO50_RS06525;old_locus_tag=BVI1335_1390008;pseudo=true NZ_CAJZAO010000045.1 Protein Homology CDS 4094 4830 . - 0 ID=cds-LDO50_RS06525;Parent=gene-LDO50_RS06525;Note=frameshifted;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010097614.1;locus_tag=LDO50_RS06525;product=glutamine ABC transporter substrate-binding protein GlnH;pseudo=true;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 5477 5848 . - . ID=gene-LDO50_RS06530;Name=LDO50_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06530;old_locus_tag=BVI1335_1390009 NZ_CAJZAO010000045.1 Protein Homology CDS 5477 5848 . - 0 ID=cds-WP_011881935.1;Parent=gene-LDO50_RS06530;Dbxref=GenBank:WP_011881935.1;Name=WP_011881935.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495095.1;locus_tag=LDO50_RS06530;product=MAPEG family protein;protein_id=WP_011881935.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 6154 7275 . + . ID=gene-LDO50_RS06535;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=LDO50_RS06535;old_locus_tag=BVI1335_1390011 NZ_CAJZAO010000045.1 Protein Homology CDS 6154 7275 . + 0 ID=cds-WP_175984013.1;Parent=gene-LDO50_RS06535;Dbxref=GenBank:WP_175984013.1;Name=WP_175984013.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899697.1;locus_tag=LDO50_RS06535;product=alanine racemase;protein_id=WP_175984013.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 7429 8223 . - . ID=gene-LDO50_RS06540;Name=LDO50_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06540;old_locus_tag=BVI1335_1390012 NZ_CAJZAO010000045.1 Protein Homology CDS 7429 8223 . - 0 ID=cds-WP_085954508.1;Parent=gene-LDO50_RS06540;Dbxref=GenBank:WP_085954508.1;Name=WP_085954508.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899698.1;locus_tag=LDO50_RS06540;product=enoyl-CoA hydratase;protein_id=WP_085954508.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 8298 8663 . - . ID=gene-LDO50_RS06545;Name=LDO50_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06545;old_locus_tag=BVI1335_1390013 NZ_CAJZAO010000045.1 Protein Homology CDS 8298 8663 . - 0 ID=cds-WP_006765703.1;Parent=gene-LDO50_RS06545;Dbxref=GenBank:WP_006765703.1;Name=WP_006765703.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759394.1;locus_tag=LDO50_RS06545;product=response regulator;protein_id=WP_006765703.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 8702 9661 . - . ID=gene-LDO50_RS06550;Name=LDO50_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06550;old_locus_tag=BVI1335_1390014 NZ_CAJZAO010000045.1 Protein Homology CDS 8702 9661 . - 0 ID=cds-WP_014725114.1;Parent=gene-LDO50_RS06550;Dbxref=GenBank:WP_014725114.1;Name=WP_014725114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495102.1;locus_tag=LDO50_RS06550;product=chemotaxis protein CheX;protein_id=WP_014725114.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 9684 10268 . - . ID=gene-LDO50_RS06555;Name=LDO50_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06555;old_locus_tag=BVI1335_1390015 NZ_CAJZAO010000045.1 Protein Homology CDS 9684 10268 . - 0 ID=cds-WP_011881930.1;Parent=gene-LDO50_RS06555;Dbxref=GenBank:WP_011881930.1;Name=WP_011881930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495103.1;locus_tag=LDO50_RS06555;product=hypothetical protein;protein_id=WP_011881930.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 10265 10838 . - . ID=gene-LDO50_RS06560;Name=LDO50_RS06560;end_range=10838,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06560;partial=true NZ_CAJZAO010000045.1 Protein Homology CDS 10265 10838 . - 1 ID=cds-WP_443797734.1;Parent=gene-LDO50_RS06560;Dbxref=GenBank:WP_443797734.1;Name=WP_443797734.1;Ontology_term=GO:0007165,GO:0016020;end_range=10838,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658488.1;locus_tag=LDO50_RS06560;partial=true;product=methyl-accepting chemotaxis protein;protein_id=WP_443797734.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 10918 13308 . - . ID=gene-LDO50_RS06565;Name=LDO50_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06565;old_locus_tag=BVI1335_1390018 NZ_CAJZAO010000045.1 Protein Homology CDS 10918 13308 . - 0 ID=cds-WP_059990918.1;Parent=gene-LDO50_RS06565;Dbxref=GenBank:WP_059990918.1;Name=WP_059990918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750135.1;locus_tag=LDO50_RS06565;product=MCP four helix bundle domain-containing protein;protein_id=WP_059990918.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 13583 13780 . + . ID=gene-LDO50_RS06570;Name=LDO50_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06570;old_locus_tag=BVI1335_1390021 NZ_CAJZAO010000045.1 GeneMarkS-2+ CDS 13583 13780 . + 0 ID=cds-WP_060044420.1;Parent=gene-LDO50_RS06570;Dbxref=GenBank:WP_060044420.1;Name=WP_060044420.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS06570;product=hypothetical protein;protein_id=WP_060044420.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 13814 14503 . + . ID=gene-LDO50_RS06575;Name=LDO50_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06575;old_locus_tag=BVI1335_1390022 NZ_CAJZAO010000045.1 Protein Homology CDS 13814 14503 . + 0 ID=cds-WP_059889121.1;Parent=gene-LDO50_RS06575;Dbxref=GenBank:WP_059889121.1;Name=WP_059889121.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410151.1;locus_tag=LDO50_RS06575;product=alpha/beta hydrolase;protein_id=WP_059889121.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 14547 16058 . - . ID=gene-LDO50_RS06580;Name=LDO50_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06580;old_locus_tag=BVI1335_1390023 NZ_CAJZAO010000045.1 Protein Homology CDS 14547 16058 . - 0 ID=cds-WP_034193810.1;Parent=gene-LDO50_RS06580;Dbxref=GenBank:WP_034193810.1;Name=WP_034193810.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658483.1;locus_tag=LDO50_RS06580;product=amino acid permease;protein_id=WP_034193810.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 16158 17564 . - . ID=gene-LDO50_RS06585;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=LDO50_RS06585;old_locus_tag=BVI1335_1390024 NZ_CAJZAO010000045.1 Protein Homology CDS 16158 17564 . - 0 ID=cds-WP_059668716.1;Parent=gene-LDO50_RS06585;Dbxref=GenBank:WP_059668716.1;Name=WP_059668716.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750132.1;locus_tag=LDO50_RS06585;product=aspartate ammonia-lyase;protein_id=WP_059668716.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 17716 18690 . + . ID=gene-LDO50_RS06590;Name=LDO50_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06590;old_locus_tag=BVI1335_1390025 NZ_CAJZAO010000045.1 Protein Homology CDS 17716 18690 . + 0 ID=cds-WP_011881924.1;Parent=gene-LDO50_RS06590;Dbxref=GenBank:WP_011881924.1;Name=WP_011881924.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338402.1;locus_tag=LDO50_RS06590;product=LysR family transcriptional regulator;protein_id=WP_011881924.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 18856 19920 . - . ID=gene-LDO50_RS06595;Name=LDO50_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06595;old_locus_tag=BVI1335_1390026 NZ_CAJZAO010000045.1 Protein Homology CDS 18856 19920 . - 0 ID=cds-WP_059990922.1;Parent=gene-LDO50_RS06595;Dbxref=GenBank:WP_059990922.1;Name=WP_059990922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759441.1;locus_tag=LDO50_RS06595;product=asparaginase;protein_id=WP_059990922.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 20247 22499 . + . ID=gene-LDO50_RS06600;Name=LDO50_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06600;old_locus_tag=BVI1335_1390028 NZ_CAJZAO010000045.1 Protein Homology CDS 20247 22499 . + 0 ID=cds-WP_034193808.1;Parent=gene-LDO50_RS06600;Dbxref=GenBank:WP_034193808.1;Name=WP_034193808.1;Ontology_term=GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689336.1;locus_tag=LDO50_RS06600;product=TonB-dependent receptor;protein_id=WP_034193808.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 22581 23603 . - . ID=gene-LDO50_RS06605;Name=LDO50_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06605;old_locus_tag=BVI1335_1390029 NZ_CAJZAO010000045.1 Protein Homology CDS 22581 23603 . - 0 ID=cds-WP_059461139.1;Parent=gene-LDO50_RS06605;Dbxref=GenBank:WP_059461139.1;Name=WP_059461139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491312.1;locus_tag=LDO50_RS06605;product=DUF2891 domain-containing protein;protein_id=WP_059461139.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 23613 24563 . - . ID=gene-LDO50_RS06610;Name=LDO50_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06610;old_locus_tag=BVI1335_1390030 NZ_CAJZAO010000045.1 Protein Homology CDS 23613 24563 . - 0 ID=cds-WP_011881920.1;Parent=gene-LDO50_RS06610;Dbxref=GenBank:WP_011881920.1;Name=WP_011881920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399760.1;locus_tag=LDO50_RS06610;product=DUF979 domain-containing protein;protein_id=WP_011881920.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 24560 25249 . - . ID=gene-LDO50_RS06615;Name=LDO50_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06615;old_locus_tag=BVI1335_1390031 NZ_CAJZAO010000045.1 Protein Homology CDS 24560 25249 . - 0 ID=cds-WP_011881919.1;Parent=gene-LDO50_RS06615;Dbxref=GenBank:WP_011881919.1;Name=WP_011881919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658477.1;locus_tag=LDO50_RS06615;product=DUF969 domain-containing protein;protein_id=WP_011881919.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 25738 25962 . + . ID=gene-LDO50_RS06620;Name=LDO50_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06620;old_locus_tag=BVI1335_1390033 NZ_CAJZAO010000045.1 Protein Homology CDS 25738 25962 . + 0 ID=cds-WP_006399758.1;Parent=gene-LDO50_RS06620;Dbxref=GenBank:WP_006399758.1;Name=WP_006399758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759437.1;locus_tag=LDO50_RS06620;product=hypothetical protein;protein_id=WP_006399758.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 26245 27360 . + . ID=gene-LDO50_RS06625;Name=LDO50_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06625;old_locus_tag=BVI1335_1390034 NZ_CAJZAO010000045.1 Protein Homology CDS 26245 27360 . + 0 ID=cds-WP_290370688.1;Parent=gene-LDO50_RS06625;Dbxref=GenBank:WP_290370688.1;Name=WP_290370688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881918.1;locus_tag=LDO50_RS06625;product=diguanylate cyclase domain-containing protein;protein_id=WP_290370688.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 27350 29599 . - . ID=gene-LDO50_RS06630;Name=LDO50_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06630;old_locus_tag=BVI1335_1390035 NZ_CAJZAO010000045.1 Protein Homology CDS 27350 29599 . - 0 ID=cds-WP_224019534.1;Parent=gene-LDO50_RS06630;Dbxref=GenBank:WP_224019534.1;Name=WP_224019534.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487684.1;locus_tag=LDO50_RS06630;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_224019534.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 29935 30894 . - . ID=gene-LDO50_RS06635;Name=LDO50_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06635;old_locus_tag=BVI1335_1390036 NZ_CAJZAO010000045.1 Protein Homology CDS 29935 30894 . - 0 ID=cds-WP_059580969.1;Parent=gene-LDO50_RS06635;Dbxref=GenBank:WP_059580969.1;Name=WP_059580969.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725127.1;locus_tag=LDO50_RS06635;product=LysR family transcriptional regulator;protein_id=WP_059580969.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 31059 32378 . + . ID=gene-LDO50_RS06640;Name=LDO50_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06640;old_locus_tag=BVI1335_1390037 NZ_CAJZAO010000045.1 Protein Homology CDS 31059 32378 . + 0 ID=cds-WP_034193804.1;Parent=gene-LDO50_RS06640;Dbxref=GenBank:WP_034193804.1;Name=WP_034193804.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479247.1;locus_tag=LDO50_RS06640;product=MFS transporter;protein_id=WP_034193804.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 32506 33672 . + . ID=gene-LDO50_RS06645;Name=LDO50_RS06645;end_range=33672,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06645;old_locus_tag=BVI1335_1390038;partial=true NZ_CAJZAO010000045.1 Protein Homology CDS 32506 33672 . + 0 ID=cds-WP_224019536.1;Parent=gene-LDO50_RS06645;Dbxref=GenBank:WP_224019536.1;Name=WP_224019536.1;end_range=33672,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658468.1;locus_tag=LDO50_RS06645;partial=true;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_224019536.1;transl_table=11 NZ_CAJZAO010000045.1 RefSeq gene 33735 33905 . + . ID=gene-LDO50_RS06650;Name=LDO50_RS06650;end_range=33905,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06650;partial=true NZ_CAJZAO010000045.1 Protein Homology CDS 33735 33905 . + 0 ID=cds-WP_224019537.1;Parent=gene-LDO50_RS06650;Dbxref=GenBank:WP_224019537.1;Name=WP_224019537.1;Ontology_term=GO:0050661;end_range=33905,.;gbkey=CDS;go_function=NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899744.1;locus_tag=LDO50_RS06650;partial=true;product=NAD(P)-binding domain-containing protein;protein_id=WP_224019537.1;transl_table=11 ##sequence-region NZ_CAJZAO010000046.1 1 20808 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000046.1 RefSeq region 1 20808 . + . ID=NZ_CAJZAO010000046.1:1..20808;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_14 NZ_CAJZAO010000046.1 RefSeq pseudogene 1 157 . - . ID=gene-LDO50_RS31050;Name=LDO50_RS31050;end_range=157,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31050;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000046.1 Protein Homology CDS 1 157 . - 0 ID=cds-LDO50_RS31050;Parent=gene-LDO50_RS31050;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=157,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004636384.1;locus_tag=LDO50_RS31050;partial=true;product=hydroxymethylbilane synthase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000046.1 RefSeq pseudogene 168 585 . - . ID=gene-LDO50_RS06655;Name=LDO50_RS06655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS06655;partial=true;pseudo=true;start_range=.,168 NZ_CAJZAO010000046.1 Protein Homology CDS 168 585 . - 0 ID=cds-LDO50_RS06655;Parent=gene-LDO50_RS06655;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193185.1;locus_tag=LDO50_RS06655;partial=true;product=hydroxymethylbilane synthase;pseudo=true;start_range=.,168;transl_table=11 NZ_CAJZAO010000046.1 RefSeq gene 793 3786 . + . ID=gene-LDO50_RS06660;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=LDO50_RS06660;old_locus_tag=BVI1335_140004 NZ_CAJZAO010000046.1 Protein Homology CDS 793 3786 . + 0 ID=cds-WP_224019538.1;Parent=gene-LDO50_RS06660;Dbxref=GenBank:WP_224019538.1;Name=WP_224019538.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212910.1;locus_tag=LDO50_RS06660;product=phosphoenolpyruvate carboxylase;protein_id=WP_224019538.1;transl_table=11 NZ_CAJZAO010000046.1 RefSeq gene 3998 4750 . - . ID=gene-LDO50_RS06665;Name=LDO50_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06665;old_locus_tag=BVI1335_140005 NZ_CAJZAO010000046.1 Protein Homology CDS 3998 4750 . - 0 ID=cds-WP_011885701.1;Parent=gene-LDO50_RS06665;Dbxref=GenBank:WP_011885701.1;Name=WP_011885701.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885701.1;locus_tag=LDO50_RS06665;product=class I SAM-dependent methyltransferase;protein_id=WP_011885701.1;transl_table=11 NZ_CAJZAO010000046.1 RefSeq gene 4936 5745 . + . ID=gene-LDO50_RS06670;Name=LDO50_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06670;old_locus_tag=BVI1335_140006 NZ_CAJZAO010000046.1 Protein Homology CDS 4936 5745 . + 0 ID=cds-WP_011885702.1;Parent=gene-LDO50_RS06670;Dbxref=GenBank:WP_011885702.1;Name=WP_011885702.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492931.1;locus_tag=LDO50_RS06670;product=helix-turn-helix transcriptional regulator;protein_id=WP_011885702.1;transl_table=11 NZ_CAJZAO010000046.1 RefSeq gene 6116 7525 . + . ID=gene-LDO50_RS06675;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=LDO50_RS06675;old_locus_tag=BVI1335_140007 NZ_CAJZAO010000046.1 Protein Homology CDS 6116 7525 . + 0 ID=cds-WP_059460528.1;Parent=gene-LDO50_RS06675;Dbxref=GenBank:WP_059460528.1;Name=WP_059460528.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762488.1;locus_tag=LDO50_RS06675;product=argininosuccinate lyase;protein_id=WP_059460528.1;transl_table=11 NZ_CAJZAO010000046.1 RefSeq gene 7628 8311 . + . ID=gene-LDO50_RS06680;Name=LDO50_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06680;old_locus_tag=BVI1335_140008 NZ_CAJZAO010000046.1 Protein Homology CDS 7628 8311 . + 0 ID=cds-WP_034192599.1;Parent=gene-LDO50_RS06680;Dbxref=GenBank:WP_034192599.1;Name=WP_034192599.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497173.1;locus_tag=LDO50_RS06680;product=HAD family hydrolase;protein_id=WP_034192599.1;transl_table=11 NZ_CAJZAO010000046.1 RefSeq gene 8415 9227 . - . ID=gene-LDO50_RS06685;Name=LDO50_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06685;old_locus_tag=BVI1335_140009 NZ_CAJZAO010000046.1 Protein Homology CDS 8415 9227 . - 0 ID=cds-WP_059621786.1;Parent=gene-LDO50_RS06685;Dbxref=GenBank:WP_059621786.1;Name=WP_059621786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545954.1;locus_tag=LDO50_RS06685;product=lysozyme inhibitor LprI family protein;protein_id=WP_059621786.1;transl_table=11 NZ_CAJZAO010000046.1 RefSeq gene 9227 11506 . - . ID=gene-LDO50_RS06690;Name=LDO50_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06690;old_locus_tag=BVI1335_140010 NZ_CAJZAO010000046.1 Protein Homology CDS 9227 11506 . - 0 ID=cds-WP_011885706.1;Parent=gene-LDO50_RS06690;Dbxref=GenBank:WP_011885706.1;Name=WP_011885706.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491304.1;locus_tag=LDO50_RS06690;product=arginine/lysine/ornithine decarboxylase;protein_id=WP_011885706.1;transl_table=11 NZ_CAJZAO010000046.1 RefSeq gene 11588 12157 . - . ID=gene-LDO50_RS06695;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=LDO50_RS06695;old_locus_tag=BVI1335_140011 NZ_CAJZAO010000046.1 Protein Homology CDS 11588 12157 . - 0 ID=cds-WP_006398615.1;Parent=gene-LDO50_RS06695;Dbxref=GenBank:WP_006398615.1;Name=WP_006398615.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398615.1;locus_tag=LDO50_RS06695;product=dCTP deaminase;protein_id=WP_006398615.1;transl_table=11 NZ_CAJZAO010000046.1 RefSeq gene 12273 12809 . - . ID=gene-LDO50_RS06700;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=LDO50_RS06700;old_locus_tag=BVI1335_140012 NZ_CAJZAO010000046.1 Protein Homology CDS 12273 12809 . - 0 ID=cds-WP_011885707.1;Parent=gene-LDO50_RS06700;Dbxref=GenBank:WP_011885707.1;Name=WP_011885707.1;gbkey=CDS;gene=sodC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493653.1;locus_tag=LDO50_RS06700;product=superoxide dismutase [Cu-Zn];protein_id=WP_011885707.1;transl_table=11 NZ_CAJZAO010000046.1 RefSeq gene 12944 14035 . - . ID=gene-LDO50_RS06705;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=LDO50_RS06705;old_locus_tag=BVI1335_140013 NZ_CAJZAO010000046.1 Protein Homology CDS 12944 14035 . - 0 ID=cds-WP_034192601.1;Parent=gene-LDO50_RS06705;Dbxref=GenBank:WP_034192601.1;Name=WP_034192601.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600266.1;locus_tag=LDO50_RS06705;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_034192601.1;transl_table=11 NZ_CAJZAO010000046.1 RefSeq gene 14388 15029 . + . ID=gene-LDO50_RS06710;Name=LDO50_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06710;old_locus_tag=BVI1335_140014 NZ_CAJZAO010000046.1 Protein Homology CDS 14388 15029 . + 0 ID=cds-WP_011885709.1;Parent=gene-LDO50_RS06710;Dbxref=GenBank:WP_011885709.1;Name=WP_011885709.1;Ontology_term=GO:0015288,GO:0042834,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896346.1;locus_tag=LDO50_RS06710;product=OmpA family protein;protein_id=WP_011885709.1;transl_table=11 NZ_CAJZAO010000046.1 RefSeq gene 15405 17570 . + . ID=gene-LDO50_RS06715;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=LDO50_RS06715;old_locus_tag=BVI1335_140015 NZ_CAJZAO010000046.1 Protein Homology CDS 15405 17570 . + 0 ID=cds-WP_224019539.1;Parent=gene-LDO50_RS06715;Dbxref=GenBank:WP_224019539.1;Name=WP_224019539.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657654.1;locus_tag=LDO50_RS06715;product=methionine--tRNA ligase;protein_id=WP_224019539.1;transl_table=11 NZ_CAJZAO010000046.1 RefSeq gene 17668 20808 . - . ID=gene-LDO50_RS06720;Name=LDO50_RS06720;end_range=20808,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06720;old_locus_tag=BVI1335_140016;partial=true NZ_CAJZAO010000046.1 Protein Homology CDS 17668 20808 . - 0 ID=cds-WP_224019540.1;Parent=gene-LDO50_RS06720;Dbxref=GenBank:WP_224019540.1;Name=WP_224019540.1;Ontology_term=GO:0009306,GO:0005886;end_range=20808,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478109.1;locus_tag=LDO50_RS06720;partial=true;product=translocation/assembly module TamB domain-containing protein;protein_id=WP_224019540.1;transl_table=11 ##sequence-region NZ_CAJZAO010000047.1 1 9370 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000047.1 RefSeq region 1 9370 . + . ID=NZ_CAJZAO010000047.1:1..9370;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_140 NZ_CAJZAO010000047.1 RefSeq gene 1 2523 . + . ID=gene-LDO50_RS06725;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=LDO50_RS06725;old_locus_tag=BVI1335_1400002;partial=true;start_range=.,1 NZ_CAJZAO010000047.1 Protein Homology CDS 1 2523 . + 0 ID=cds-WP_224019541.1;Parent=gene-LDO50_RS06725;Dbxref=GenBank:WP_224019541.1;Name=WP_224019541.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897318.1;locus_tag=LDO50_RS06725;partial=true;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_224019541.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000047.1 RefSeq gene 2550 4103 . + . ID=gene-LDO50_RS06730;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=LDO50_RS06730;old_locus_tag=BVI1335_1400004 NZ_CAJZAO010000047.1 Protein Homology CDS 2550 4103 . + 0 ID=cds-WP_014722846.1;Parent=gene-LDO50_RS06730;Dbxref=GenBank:WP_014722846.1;Name=WP_014722846.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004549777.1;locus_tag=LDO50_RS06730;product=cellulose biosynthesis protein BcsG;protein_id=WP_014722846.1;transl_table=11 NZ_CAJZAO010000047.1 RefSeq gene 4085 4282 . + . ID=gene-LDO50_RS06735;Name=LDO50_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06735;old_locus_tag=BVI1335_1400003 NZ_CAJZAO010000047.1 Protein Homology CDS 4085 4282 . + 0 ID=cds-WP_011884396.1;Parent=gene-LDO50_RS06735;Dbxref=GenBank:WP_011884396.1;Name=WP_011884396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363646.1;locus_tag=LDO50_RS06735;product=hypothetical protein;protein_id=WP_011884396.1;transl_table=11 NZ_CAJZAO010000047.1 RefSeq gene 4338 5222 . - . ID=gene-LDO50_RS06740;Name=LDO50_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06740;old_locus_tag=BVI1335_1400005 NZ_CAJZAO010000047.1 Protein Homology CDS 4338 5222 . - 0 ID=cds-WP_045579240.1;Parent=gene-LDO50_RS06740;Dbxref=GenBank:WP_045579240.1;Name=WP_045579240.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722848.1;locus_tag=LDO50_RS06740;product=pirin family protein;protein_id=WP_045579240.1;transl_table=11 NZ_CAJZAO010000047.1 RefSeq gene 5249 5641 . - . ID=gene-LDO50_RS06745;Name=LDO50_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06745;old_locus_tag=BVI1335_1400006 NZ_CAJZAO010000047.1 Protein Homology CDS 5249 5641 . - 0 ID=cds-WP_011884400.1;Parent=gene-LDO50_RS06745;Dbxref=GenBank:WP_011884400.1;Name=WP_011884400.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656589.1;locus_tag=LDO50_RS06745;product=OsmC family protein;protein_id=WP_011884400.1;transl_table=11 NZ_CAJZAO010000047.1 RefSeq gene 5691 6234 . - . ID=gene-LDO50_RS31335;Name=LDO50_RS31335;end_range=6234,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31335;old_locus_tag=BVI1335_1400007;partial=true NZ_CAJZAO010000047.1 Protein Homology CDS 5691 6234 . - 1 ID=cds-WP_443797735.1;Parent=gene-LDO50_RS31335;Dbxref=GenBank:WP_443797735.1;Name=WP_443797735.1;Ontology_term=GO:0006812,GO:0055085,GO:1902600,GO:0015297,GO:0016020;end_range=6234,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405009.1;locus_tag=LDO50_RS31335;partial=true;product=cation:proton antiporter domain-containing protein;protein_id=WP_443797735.1;transl_table=11 NZ_CAJZAO010000047.1 RefSeq gene 6245 7299 . - . ID=gene-LDO50_RS06750;Name=LDO50_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06750;old_locus_tag=BVI1335_1400008;partial=true;start_range=.,6245 NZ_CAJZAO010000047.1 Protein Homology CDS 6245 7299 . - 0 ID=cds-WP_443797736.1;Parent=gene-LDO50_RS06750;Dbxref=GenBank:WP_443797736.1;Name=WP_443797736.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405009.1;locus_tag=LDO50_RS06750;partial=true;product=cation:proton antiporter;protein_id=WP_443797736.1;start_range=.,6245;transl_table=11 NZ_CAJZAO010000047.1 RefSeq gene 7296 7559 . - . ID=gene-LDO50_RS06755;Name=LDO50_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06755;old_locus_tag=BVI1335_1400009 NZ_CAJZAO010000047.1 Protein Homology CDS 7296 7559 . - 0 ID=cds-WP_224019542.1;Parent=gene-LDO50_RS06755;Dbxref=GenBank:WP_224019542.1;Name=WP_224019542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722849.1;locus_tag=LDO50_RS06755;product=DUF1427 family protein;protein_id=WP_224019542.1;transl_table=11 NZ_CAJZAO010000047.1 RefSeq gene 7711 8100 . - . ID=gene-LDO50_RS06760;Name=LDO50_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06760 NZ_CAJZAO010000047.1 GeneMarkS-2+ CDS 7711 8100 . - 0 ID=cds-WP_224019543.1;Parent=gene-LDO50_RS06760;Dbxref=GenBank:WP_224019543.1;Name=WP_224019543.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS06760;product=hypothetical protein;protein_id=WP_224019543.1;transl_table=11 NZ_CAJZAO010000047.1 RefSeq gene 8233 9147 . + . ID=gene-LDO50_RS06765;Name=LDO50_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06765;old_locus_tag=BVI1335_1400011 NZ_CAJZAO010000047.1 Protein Homology CDS 8233 9147 . + 0 ID=cds-WP_059695913.1;Parent=gene-LDO50_RS06765;Dbxref=GenBank:WP_059695913.1;Name=WP_059695913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756028.1;locus_tag=LDO50_RS06765;product=VOC family protein;protein_id=WP_059695913.1;transl_table=11 NZ_CAJZAO010000047.1 RefSeq gene 9144 9370 . + . ID=gene-LDO50_RS06770;Name=LDO50_RS06770;end_range=9370,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06770;partial=true NZ_CAJZAO010000047.1 Protein Homology CDS 9144 9370 . + 0 ID=cds-WP_224019544.1;Parent=gene-LDO50_RS06770;Dbxref=GenBank:WP_224019544.1;Name=WP_224019544.1;end_range=9370,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897305.1;locus_tag=LDO50_RS06770;partial=true;product=DUF1275 family protein;protein_id=WP_224019544.1;transl_table=11 ##sequence-region NZ_CAJZAO010000048.1 1 35633 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000048.1 RefSeq region 1 35633 . + . ID=NZ_CAJZAO010000048.1:1..35633;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_141 NZ_CAJZAO010000048.1 RefSeq gene 1 344 . + . ID=gene-LDO50_RS06775;Name=LDO50_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06775;old_locus_tag=BVI1335_1410001;partial=true;start_range=.,1 NZ_CAJZAO010000048.1 Protein Homology CDS 1 344 . + 2 ID=cds-WP_253074456.1;Parent=gene-LDO50_RS06775;Dbxref=GenBank:WP_253074456.1;Name=WP_253074456.1;Ontology_term=GO:0003824,GO:0030976;gbkey=CDS;go_function=catalytic activity|0003824||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732961.1;locus_tag=LDO50_RS06775;partial=true;product=thiamine pyrophosphate-dependent enzyme;protein_id=WP_253074456.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 393 1205 . + . ID=gene-LDO50_RS06780;Name=LDO50_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06780;old_locus_tag=BVI1335_1410003 NZ_CAJZAO010000048.1 Protein Homology CDS 393 1205 . + 0 ID=cds-WP_011879732.1;Parent=gene-LDO50_RS06780;Dbxref=GenBank:WP_011879732.1;Name=WP_011879732.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017775041.1;locus_tag=LDO50_RS06780;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_011879732.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 1247 2284 . + . ID=gene-LDO50_RS06785;Name=LDO50_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06785;old_locus_tag=BVI1335_1410002 NZ_CAJZAO010000048.1 Protein Homology CDS 1247 2284 . + 0 ID=cds-WP_224019545.1;Parent=gene-LDO50_RS06785;Dbxref=GenBank:WP_224019545.1;Name=WP_224019545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732963.1;locus_tag=LDO50_RS06785;product=WD40/YVTN/BNR-like repeat-containing protein;protein_id=WP_224019545.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 2297 2812 . + . ID=gene-LDO50_RS06790;Name=LDO50_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06790;old_locus_tag=BVI1335_1410004 NZ_CAJZAO010000048.1 Protein Homology CDS 2297 2812 . + 0 ID=cds-WP_011879734.1;Parent=gene-LDO50_RS06790;Dbxref=GenBank:WP_011879734.1;Name=WP_011879734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732964.1;locus_tag=LDO50_RS06790;product=VOC family protein;protein_id=WP_011879734.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 2873 3478 . + . ID=gene-LDO50_RS06795;Name=LDO50_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06795;old_locus_tag=BVI1335_1410005 NZ_CAJZAO010000048.1 Protein Homology CDS 2873 3478 . + 0 ID=cds-WP_011879735.1;Parent=gene-LDO50_RS06795;Dbxref=GenBank:WP_011879735.1;Name=WP_011879735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697510.1;locus_tag=LDO50_RS06795;product=amino acid synthesis family protein;protein_id=WP_011879735.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 3506 4393 . + . ID=gene-LDO50_RS06800;Name=LDO50_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06800;old_locus_tag=BVI1335_1410006 NZ_CAJZAO010000048.1 Protein Homology CDS 3506 4393 . + 0 ID=cds-WP_212199164.1;Parent=gene-LDO50_RS06800;Dbxref=GenBank:WP_212199164.1;Name=WP_212199164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725546.1;locus_tag=LDO50_RS06800;product=alpha/beta fold hydrolase;protein_id=WP_212199164.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 4390 6030 . + . ID=gene-LDO50_RS06805;Name=LDO50_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06805;old_locus_tag=BVI1335_1410007 NZ_CAJZAO010000048.1 Protein Homology CDS 4390 6030 . + 0 ID=cds-WP_059457173.1;Parent=gene-LDO50_RS06805;Dbxref=GenBank:WP_059457173.1;Name=WP_059457173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549881.1;locus_tag=LDO50_RS06805;product=bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;protein_id=WP_059457173.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 6020 6352 . + . ID=gene-LDO50_RS06810;Name=LDO50_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06810;old_locus_tag=BVI1335_1410008 NZ_CAJZAO010000048.1 Protein Homology CDS 6020 6352 . + 0 ID=cds-WP_060122489.1;Parent=gene-LDO50_RS06810;Dbxref=GenBank:WP_060122489.1;Name=WP_060122489.1;Ontology_term=GO:0000423,GO:0030674;gbkey=CDS;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=mitophagy|0000423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879738.1;locus_tag=LDO50_RS06810;product=NIPSNAP family protein;protein_id=WP_060122489.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 6459 7910 . + . ID=gene-LDO50_RS06815;Name=LDO50_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06815;old_locus_tag=BVI1335_1410009 NZ_CAJZAO010000048.1 Protein Homology CDS 6459 7910 . + 0 ID=cds-WP_224019546.1;Parent=gene-LDO50_RS06815;Dbxref=GenBank:WP_224019546.1;Name=WP_224019546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879739.1;locus_tag=LDO50_RS06815;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_224019546.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 7954 8682 . - . ID=gene-LDO50_RS06820;Name=LDO50_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06820;old_locus_tag=BVI1335_1410010 NZ_CAJZAO010000048.1 Protein Homology CDS 7954 8682 . - 0 ID=cds-WP_059457140.1;Parent=gene-LDO50_RS06820;Dbxref=GenBank:WP_059457140.1;Name=WP_059457140.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732970.1;locus_tag=LDO50_RS06820;product=IclR family transcriptional regulator;protein_id=WP_059457140.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 8894 9949 . + . ID=gene-LDO50_RS06825;Name=LDO50_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06825;old_locus_tag=BVI1335_1410011 NZ_CAJZAO010000048.1 Protein Homology CDS 8894 9949 . + 0 ID=cds-WP_212163791.1;Parent=gene-LDO50_RS06825;Dbxref=GenBank:WP_212163791.1;Name=WP_212163791.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725551.1;locus_tag=LDO50_RS06825;product=porin;protein_id=WP_212163791.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 10010 11167 . - . ID=gene-LDO50_RS06830;Name=LDO50_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06830;old_locus_tag=BVI1335_1410012 NZ_CAJZAO010000048.1 Protein Homology CDS 10010 11167 . - 0 ID=cds-WP_224019547.1;Parent=gene-LDO50_RS06830;Dbxref=GenBank:WP_224019547.1;Name=WP_224019547.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879742.1;locus_tag=LDO50_RS06830;product=porin;protein_id=WP_224019547.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 11354 11917 . - . ID=gene-LDO50_RS06835;Name=LDO50_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06835;old_locus_tag=BVI1335_1410013 NZ_CAJZAO010000048.1 Protein Homology CDS 11354 11917 . - 0 ID=cds-WP_059457142.1;Parent=gene-LDO50_RS06835;Dbxref=GenBank:WP_059457142.1;Name=WP_059457142.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732971.1;locus_tag=LDO50_RS06835;product=cytochrome b;protein_id=WP_059457142.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 12081 13445 . - . ID=gene-LDO50_RS06840;Name=LDO50_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06840;old_locus_tag=BVI1335_1410014 NZ_CAJZAO010000048.1 Protein Homology CDS 12081 13445 . - 0 ID=cds-WP_224019548.1;Parent=gene-LDO50_RS06840;Dbxref=GenBank:WP_224019548.1;Name=WP_224019548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549874.1;locus_tag=LDO50_RS06840;product=aspartate aminotransferase family protein;protein_id=WP_224019548.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 13501 14946 . - . ID=gene-LDO50_RS06845;Name=LDO50_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06845;old_locus_tag=BVI1335_1410015 NZ_CAJZAO010000048.1 Protein Homology CDS 13501 14946 . - 0 ID=cds-WP_059579409.1;Parent=gene-LDO50_RS06845;Dbxref=GenBank:WP_059579409.1;Name=WP_059579409.1;Ontology_term=GO:0004030;gbkey=CDS;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725554.1;locus_tag=LDO50_RS06845;product=aldehyde dehydrogenase family protein;protein_id=WP_059579409.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 15257 16696 . - . ID=gene-LDO50_RS06850;Name=LDO50_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06850;old_locus_tag=BVI1335_1410016 NZ_CAJZAO010000048.1 Protein Homology CDS 15257 16696 . - 0 ID=cds-WP_059704033.1;Parent=gene-LDO50_RS06850;Dbxref=GenBank:WP_059704033.1;Name=WP_059704033.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549872.1;locus_tag=LDO50_RS06850;product=APC family permease;protein_id=WP_059704033.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 16988 17953 . - . ID=gene-LDO50_RS06855;Name=LDO50_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06855;old_locus_tag=BVI1335_1410018 NZ_CAJZAO010000048.1 Protein Homology CDS 16988 17953 . - 0 ID=cds-WP_224019549.1;Parent=gene-LDO50_RS06855;Dbxref=GenBank:WP_224019549.1;Name=WP_224019549.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725556.1;locus_tag=LDO50_RS06855;product=helix-turn-helix domain-containing protein;protein_id=WP_224019549.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 18766 20079 . + . ID=gene-LDO50_RS06860;Name=LDO50_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06860;old_locus_tag=BVI1335_1410019 NZ_CAJZAO010000048.1 Protein Homology CDS 18766 20079 . + 0 ID=cds-WP_224019550.1;Parent=gene-LDO50_RS06860;Dbxref=GenBank:WP_224019550.1;Name=WP_224019550.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549870.1;locus_tag=LDO50_RS06860;product=MFS transporter;protein_id=WP_224019550.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 20109 21299 . - . ID=gene-LDO50_RS06865;Name=LDO50_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06865;old_locus_tag=BVI1335_1410020 NZ_CAJZAO010000048.1 Protein Homology CDS 20109 21299 . - 0 ID=cds-WP_224019551.1;Parent=gene-LDO50_RS06865;Dbxref=GenBank:WP_224019551.1;Name=WP_224019551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725558.1;locus_tag=LDO50_RS06865;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_224019551.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 21332 23113 . - . ID=gene-LDO50_RS06870;Name=LDO50_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06870;old_locus_tag=BVI1335_1410021 NZ_CAJZAO010000048.1 Protein Homology CDS 21332 23113 . - 0 ID=cds-WP_011879750.1;Parent=gene-LDO50_RS06870;Dbxref=GenBank:WP_011879750.1;Name=WP_011879750.1;Ontology_term=GO:0016836,GO:0051536;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217270.1;locus_tag=LDO50_RS06870;product=IlvD/Edd family dehydratase;protein_id=WP_011879750.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 23369 24406 . - . ID=gene-LDO50_RS06875;Name=LDO50_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06875;old_locus_tag=BVI1335_1410023 NZ_CAJZAO010000048.1 Protein Homology CDS 23369 24406 . - 0 ID=cds-WP_186445358.1;Parent=gene-LDO50_RS06875;Dbxref=GenBank:WP_186445358.1;Name=WP_186445358.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336821.1;locus_tag=LDO50_RS06875;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_186445358.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 24702 26048 . + . ID=gene-LDO50_RS06880;Name=LDO50_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06880;old_locus_tag=BVI1335_1410024 NZ_CAJZAO010000048.1 Protein Homology CDS 24702 26048 . + 0 ID=cds-WP_059453781.1;Parent=gene-LDO50_RS06880;Dbxref=GenBank:WP_059453781.1;Name=WP_059453781.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879752.1;locus_tag=LDO50_RS06880;product=MFS transporter;protein_id=WP_059453781.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 26118 27434 . - . ID=gene-LDO50_RS06885;Name=LDO50_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06885;old_locus_tag=BVI1335_1410025 NZ_CAJZAO010000048.1 Protein Homology CDS 26118 27434 . - 0 ID=cds-WP_224019552.1;Parent=gene-LDO50_RS06885;Dbxref=GenBank:WP_224019552.1;Name=WP_224019552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498141.1;locus_tag=LDO50_RS06885;product=MFS transporter;protein_id=WP_224019552.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 27500 28717 . - . ID=gene-LDO50_RS06890;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=LDO50_RS06890;old_locus_tag=BVI1335_1410026 NZ_CAJZAO010000048.1 Protein Homology CDS 27500 28717 . - 0 ID=cds-WP_290369898.1;Parent=gene-LDO50_RS06890;Dbxref=GenBank:WP_290369898.1;Name=WP_290369898.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498142.1;locus_tag=LDO50_RS06890;product=tricarballylate utilization 4Fe-4S protein TcuB;protein_id=WP_290369898.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 28704 30110 . - . ID=gene-LDO50_RS06895;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=LDO50_RS06895;old_locus_tag=BVI1335_1410027 NZ_CAJZAO010000048.1 Protein Homology CDS 28704 30110 . - 0 ID=cds-WP_059453784.1;Parent=gene-LDO50_RS06895;Dbxref=GenBank:WP_059453784.1;Name=WP_059453784.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011616411.1;locus_tag=LDO50_RS06895;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=WP_059453784.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 30208 31131 . - . ID=gene-LDO50_RS06900;Name=LDO50_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06900;old_locus_tag=BVI1335_1410028 NZ_CAJZAO010000048.1 Protein Homology CDS 30208 31131 . - 0 ID=cds-WP_011879756.1;Parent=gene-LDO50_RS06900;Dbxref=GenBank:WP_011879756.1;Name=WP_011879756.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879756.1;locus_tag=LDO50_RS06900;product=LysR family transcriptional regulator;protein_id=WP_011879756.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 31134 31415 . + . ID=gene-LDO50_RS06905;Name=LDO50_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06905 NZ_CAJZAO010000048.1 GeneMarkS-2+ CDS 31134 31415 . + 0 ID=cds-WP_224019553.1;Parent=gene-LDO50_RS06905;Dbxref=GenBank:WP_224019553.1;Name=WP_224019553.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS06905;product=hypothetical protein;protein_id=WP_224019553.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 32068 33594 . + . ID=gene-LDO50_RS06910;Name=LDO50_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06910;old_locus_tag=BVI1335_1410030 NZ_CAJZAO010000048.1 Protein Homology CDS 32068 33594 . + 0 ID=cds-WP_046423200.1;Parent=gene-LDO50_RS06910;Dbxref=GenBank:WP_046423200.1;Name=WP_046423200.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879757.1;locus_tag=LDO50_RS06910;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_046423200.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 33636 35006 . + . ID=gene-LDO50_RS06915;Name=LDO50_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06915;old_locus_tag=BVI1335_1410031 NZ_CAJZAO010000048.1 Protein Homology CDS 33636 35006 . + 0 ID=cds-WP_034194356.1;Parent=gene-LDO50_RS06915;Dbxref=GenBank:WP_034194356.1;Name=WP_034194356.1;Ontology_term=GO:0016780;gbkey=CDS;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725567.1;locus_tag=LDO50_RS06915;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_034194356.1;transl_table=11 NZ_CAJZAO010000048.1 RefSeq gene 35015 35467 . + . ID=gene-LDO50_RS06920;Name=LDO50_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06920;old_locus_tag=BVI1335_1410032 NZ_CAJZAO010000048.1 Protein Homology CDS 35015 35467 . + 0 ID=cds-WP_011879759.1;Parent=gene-LDO50_RS06920;Dbxref=GenBank:WP_011879759.1;Name=WP_011879759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879759.1;locus_tag=LDO50_RS06920;product=arsenate reductase/protein-tyrosine-phosphatase family protein;protein_id=WP_011879759.1;transl_table=11 ##sequence-region NZ_CAJZAO010000049.1 1 1631 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000049.1 RefSeq region 1 1631 . + . ID=NZ_CAJZAO010000049.1:1..1631;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_142 NZ_CAJZAO010000049.1 RefSeq gene 1 1631 . + . ID=gene-LDO50_RS06925;Name=bcsB;end_range=1631,.;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=LDO50_RS06925;partial=true;start_range=.,1 NZ_CAJZAO010000049.1 Protein Homology CDS 1 1631 . + 1 ID=cds-WP_224019554.1;Parent=gene-LDO50_RS06925;Dbxref=GenBank:WP_224019554.1;Name=WP_224019554.1;end_range=1631,.;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726201.1;locus_tag=LDO50_RS06925;partial=true;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_224019554.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAO010000050.1 1 16251 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000050.1 RefSeq region 1 16251 . + . ID=NZ_CAJZAO010000050.1:1..16251;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_143 NZ_CAJZAO010000050.1 RefSeq gene 54 1538 . - . ID=gene-LDO50_RS06930;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=LDO50_RS06930;old_locus_tag=BVI1335_1430001 NZ_CAJZAO010000050.1 Protein Homology CDS 54 1538 . - 0 ID=cds-WP_224019555.1;Parent=gene-LDO50_RS06930;Dbxref=GenBank:WP_224019555.1;Name=WP_224019555.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544499.1;locus_tag=LDO50_RS06930;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_224019555.1;transl_table=11 NZ_CAJZAO010000050.1 RefSeq gene 1567 2736 . - . ID=gene-LDO50_RS06935;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=LDO50_RS06935;old_locus_tag=BVI1335_1430002 NZ_CAJZAO010000050.1 Protein Homology CDS 1567 2736 . - 0 ID=cds-WP_011883174.1;Parent=gene-LDO50_RS06935;Dbxref=GenBank:WP_011883174.1;Name=WP_011883174.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477019.1;locus_tag=LDO50_RS06935;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_011883174.1;transl_table=11 NZ_CAJZAO010000050.1 RefSeq gene 2753 4159 . - . ID=gene-LDO50_RS06940;Name=LDO50_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06940;old_locus_tag=BVI1335_1430003 NZ_CAJZAO010000050.1 Protein Homology CDS 2753 4159 . - 0 ID=cds-WP_224019556.1;Parent=gene-LDO50_RS06940;Dbxref=GenBank:WP_224019556.1;Name=WP_224019556.1;Ontology_term=GO:0009252,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333460.1;locus_tag=LDO50_RS06940;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_224019556.1;transl_table=11 NZ_CAJZAO010000050.1 RefSeq gene 4156 5691 . - . ID=gene-LDO50_RS06945;Name=LDO50_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06945;old_locus_tag=BVI1335_1430004 NZ_CAJZAO010000050.1 Protein Homology CDS 4156 5691 . - 0 ID=cds-WP_224019557.1;Parent=gene-LDO50_RS06945;Dbxref=GenBank:WP_224019557.1;Name=WP_224019557.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602111.1;locus_tag=LDO50_RS06945;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_224019557.1;transl_table=11 NZ_CAJZAO010000050.1 RefSeq gene 5688 7538 . - . ID=gene-LDO50_RS06950;Name=LDO50_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06950;old_locus_tag=BVI1335_1430005 NZ_CAJZAO010000050.1 Protein Homology CDS 5688 7538 . - 0 ID=cds-WP_011883171.1;Parent=gene-LDO50_RS06950;Dbxref=GenBank:WP_011883171.1;Name=WP_011883171.1;Ontology_term=GO:0009252,GO:0051301,GO:0071555,GO:0008658,GO:0008955,GO:0009002,GO:0016787,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532007.1;locus_tag=LDO50_RS06950;product=peptidoglycan D%2CD-transpeptidase FtsI family protein;protein_id=WP_011883171.1;transl_table=11 NZ_CAJZAO010000050.1 RefSeq gene 7535 7876 . - . ID=gene-LDO50_RS06955;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=LDO50_RS06955;old_locus_tag=BVI1335_1430006 NZ_CAJZAO010000050.1 Protein Homology CDS 7535 7876 . - 0 ID=cds-WP_014722388.1;Parent=gene-LDO50_RS06955;Dbxref=GenBank:WP_014722388.1;Name=WP_014722388.1;Ontology_term=GO:0000910,GO:0016020;gbkey=CDS;gene=ftsL;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527786.1;locus_tag=LDO50_RS06955;product=cell division protein FtsL;protein_id=WP_014722388.1;transl_table=11 NZ_CAJZAO010000050.1 RefSeq gene 7873 8814 . - . ID=gene-LDO50_RS06960;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=LDO50_RS06960;old_locus_tag=BVI1335_1430007 NZ_CAJZAO010000050.1 Protein Homology CDS 7873 8814 . - 0 ID=cds-WP_011883169.1;Parent=gene-LDO50_RS06960;Dbxref=GenBank:WP_011883169.1;Name=WP_011883169.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350832.1;locus_tag=LDO50_RS06960;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_011883169.1;transl_table=11 NZ_CAJZAO010000050.1 RefSeq gene 8838 9266 . - . ID=gene-LDO50_RS06965;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=LDO50_RS06965;old_locus_tag=BVI1335_1430008 NZ_CAJZAO010000050.1 Protein Homology CDS 8838 9266 . - 0 ID=cds-WP_006400450.1;Parent=gene-LDO50_RS06965;Dbxref=GenBank:WP_006400450.1;Name=WP_006400450.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255554.1;locus_tag=LDO50_RS06965;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_006400450.1;transl_table=11 NZ_CAJZAO010000050.1 RefSeq gene 9654 10280 . - . ID=gene-LDO50_RS06970;Name=coq7;gbkey=Gene;gene=coq7;gene_biotype=protein_coding;locus_tag=LDO50_RS06970;old_locus_tag=BVI1335_1430009 NZ_CAJZAO010000050.1 Protein Homology CDS 9654 10280 . - 0 ID=cds-WP_014722385.1;Parent=gene-LDO50_RS06970;Dbxref=GenBank:WP_014722385.1;Name=WP_014722385.1;Ontology_term=GO:0006744,GO:0004497;gbkey=CDS;gene=coq7;go_function=monooxygenase activity|0004497||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106632.1;locus_tag=LDO50_RS06970;product=2-polyprenyl-3-methyl-6-methoxy-1%2C4-benzoquinone monooxygenase;protein_id=WP_014722385.1;transl_table=11 NZ_CAJZAO010000050.1 RefSeq gene 10559 11728 . + . ID=gene-LDO50_RS06975;Name=LDO50_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06975;old_locus_tag=BVI1335_1430011 NZ_CAJZAO010000050.1 Protein Homology CDS 10559 11728 . + 0 ID=cds-WP_011883167.1;Parent=gene-LDO50_RS06975;Dbxref=GenBank:WP_011883167.1;Name=WP_011883167.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195141.1;locus_tag=LDO50_RS06975;product=porin;protein_id=WP_011883167.1;transl_table=11 NZ_CAJZAO010000050.1 RefSeq gene 12095 13768 . - . ID=gene-LDO50_RS06980;Name=LDO50_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06980;old_locus_tag=BVI1335_1430012 NZ_CAJZAO010000050.1 Protein Homology CDS 12095 13768 . - 0 ID=cds-WP_046428753.1;Parent=gene-LDO50_RS06980;Dbxref=GenBank:WP_046428753.1;Name=WP_046428753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898193.1;locus_tag=LDO50_RS06980;product=long-chain fatty acid--CoA ligase;protein_id=WP_046428753.1;transl_table=11 NZ_CAJZAO010000050.1 RefSeq gene 13905 15980 . - . ID=gene-LDO50_RS06985;Name=LDO50_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06985;old_locus_tag=BVI1335_1430013 NZ_CAJZAO010000050.1 Protein Homology CDS 13905 15980 . - 0 ID=cds-WP_224019558.1;Parent=gene-LDO50_RS06985;Dbxref=GenBank:WP_224019558.1;Name=WP_224019558.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655882.1;locus_tag=LDO50_RS06985;product=molybdopterin-containing oxidoreductase family protein;protein_id=WP_224019558.1;transl_table=11 ##sequence-region NZ_CAJZAO010000051.1 1 9696 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000051.1 RefSeq region 1 9696 . + . ID=NZ_CAJZAO010000051.1:1..9696;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_144 NZ_CAJZAO010000051.1 RefSeq gene 1 504 . + . ID=gene-LDO50_RS06990;Name=LDO50_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06990;old_locus_tag=BVI1335_1440001;partial=true;start_range=.,1 NZ_CAJZAO010000051.1 Protein Homology CDS 1 504 . + 0 ID=cds-WP_224019559.1;Parent=gene-LDO50_RS06990;Dbxref=GenBank:WP_224019559.1;Name=WP_224019559.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495491.1;locus_tag=LDO50_RS06990;partial=true;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_224019559.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000051.1 RefSeq gene 527 1828 . + . ID=gene-LDO50_RS06995;Name=LDO50_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS06995;old_locus_tag=BVI1335_1440002 NZ_CAJZAO010000051.1 Protein Homology CDS 527 1828 . + 0 ID=cds-WP_011886241.1;Parent=gene-LDO50_RS06995;Dbxref=GenBank:WP_011886241.1;Name=WP_011886241.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477579.1;locus_tag=LDO50_RS06995;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_011886241.1;transl_table=11 NZ_CAJZAO010000051.1 RefSeq gene 1954 2628 . - . ID=gene-LDO50_RS07000;Name=LDO50_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07000;old_locus_tag=BVI1335_1440003 NZ_CAJZAO010000051.1 Protein Homology CDS 1954 2628 . - 0 ID=cds-WP_011886242.1;Parent=gene-LDO50_RS07000;Dbxref=GenBank:WP_011886242.1;Name=WP_011886242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546399.1;locus_tag=LDO50_RS07000;product=DUF799 domain-containing protein;protein_id=WP_011886242.1;transl_table=11 NZ_CAJZAO010000051.1 RefSeq gene 2639 3094 . - . ID=gene-LDO50_RS07005;Name=LDO50_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07005;old_locus_tag=BVI1335_1440004 NZ_CAJZAO010000051.1 Protein Homology CDS 2639 3094 . - 0 ID=cds-WP_011886243.1;Parent=gene-LDO50_RS07005;Dbxref=GenBank:WP_011886243.1;Name=WP_011886243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329380.1;locus_tag=LDO50_RS07005;product=DUF4810 domain-containing protein;protein_id=WP_011886243.1;transl_table=11 NZ_CAJZAO010000051.1 RefSeq gene 3151 3828 . - . ID=gene-LDO50_RS07010;Name=LDO50_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07010;old_locus_tag=BVI1335_1440005 NZ_CAJZAO010000051.1 Protein Homology CDS 3151 3828 . - 0 ID=cds-WP_014723798.1;Parent=gene-LDO50_RS07010;Dbxref=GenBank:WP_014723798.1;Name=WP_014723798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484289.1;locus_tag=LDO50_RS07010;product=CsgG/HfaB family protein;protein_id=WP_014723798.1;transl_table=11 NZ_CAJZAO010000051.1 RefSeq gene 4436 5791 . - . ID=gene-LDO50_RS07015;Name=gor;gbkey=Gene;gene=gor;gene_biotype=protein_coding;locus_tag=LDO50_RS07015;old_locus_tag=BVI1335_1440006 NZ_CAJZAO010000051.1 Protein Homology CDS 4436 5791 . - 0 ID=cds-WP_212162405.1;Parent=gene-LDO50_RS07015;Dbxref=GenBank:WP_212162405.1;Name=WP_212162405.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gor;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495494.1;locus_tag=LDO50_RS07015;product=glutathione-disulfide reductase;protein_id=WP_212162405.1;transl_table=11 NZ_CAJZAO010000051.1 RefSeq gene 6032 6256 . - . ID=gene-LDO50_RS07020;Name=LDO50_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07020;old_locus_tag=BVI1335_1440007 NZ_CAJZAO010000051.1 Protein Homology CDS 6032 6256 . - 0 ID=cds-WP_034192573.1;Parent=gene-LDO50_RS07020;Dbxref=GenBank:WP_034192573.1;Name=WP_034192573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753937.1;locus_tag=LDO50_RS07020;product=hypothetical protein;protein_id=WP_034192573.1;transl_table=11 NZ_CAJZAO010000051.1 RefSeq gene 6588 7709 . - . ID=gene-LDO50_RS07025;Name=LDO50_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07025;old_locus_tag=BVI1335_1440008 NZ_CAJZAO010000051.1 Protein Homology CDS 6588 7709 . - 0 ID=cds-WP_014723803.1;Parent=gene-LDO50_RS07025;Dbxref=GenBank:WP_014723803.1;Name=WP_014723803.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492356.1;locus_tag=LDO50_RS07025;product=porin;protein_id=WP_014723803.1;transl_table=11 NZ_CAJZAO010000051.1 RefSeq gene 8197 8937 . - . ID=gene-LDO50_RS07030;Name=LDO50_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07030;old_locus_tag=BVI1335_1440010;partial=true;start_range=.,8197 NZ_CAJZAO010000051.1 Protein Homology CDS 8197 8937 . - 0 ID=cds-WP_224019560.1;Parent=gene-LDO50_RS07030;Dbxref=GenBank:WP_224019560.1;Name=WP_224019560.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495495.1;locus_tag=LDO50_RS07030;partial=true;product=YoaK family protein;protein_id=WP_224019560.1;start_range=.,8197;transl_table=11 NZ_CAJZAO010000051.1 RefSeq gene 9018 9545 . - . ID=gene-LDO50_RS07035;Name=LDO50_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07035;old_locus_tag=BVI1335_1440011 NZ_CAJZAO010000051.1 Protein Homology CDS 9018 9545 . - 0 ID=cds-WP_011886248.1;Parent=gene-LDO50_RS07035;Dbxref=GenBank:WP_011886248.1;Name=WP_011886248.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546406.1;locus_tag=LDO50_RS07035;product=chromate transporter;protein_id=WP_011886248.1;transl_table=11 NZ_CAJZAO010000051.1 RefSeq pseudogene 9542 9696 . - . ID=gene-LDO50_RS07040;Name=LDO50_RS07040;end_range=9696,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS07040;old_locus_tag=BVI1335_1440012;partial=true;pseudo=true NZ_CAJZAO010000051.1 Protein Homology CDS 9542 9696 . - 2 ID=cds-LDO50_RS07040;Parent=gene-LDO50_RS07040;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=9696,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408019.1;locus_tag=LDO50_RS07040;partial=true;product=chromate transporter;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000052.1 1 6090 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000052.1 RefSeq region 1 6090 . + . ID=NZ_CAJZAO010000052.1:1..6090;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_145 NZ_CAJZAO010000052.1 RefSeq gene 1 351 . - . ID=gene-LDO50_RS31340;Name=LDO50_RS31340;end_range=351,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31340;partial=true;start_range=.,1 NZ_CAJZAO010000052.1 Protein Homology CDS 1 351 . - 0 ID=cds-WP_443797737.1;Parent=gene-LDO50_RS31340;Dbxref=GenBank:WP_443797737.1;Name=WP_443797737.1;end_range=351,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339495.1;locus_tag=LDO50_RS31340;partial=true;product=TonB-dependent receptor domain-containing protein;protein_id=WP_443797737.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000052.1 RefSeq gene 362 1837 . - . ID=gene-LDO50_RS07045;Name=LDO50_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07045;old_locus_tag=BVI1335_1450002;partial=true;start_range=.,362 NZ_CAJZAO010000052.1 Protein Homology CDS 362 1837 . - 0 ID=cds-WP_443797738.1;Parent=gene-LDO50_RS07045;Dbxref=GenBank:WP_443797738.1;Name=WP_443797738.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726244.1;locus_tag=LDO50_RS07045;partial=true;product=TonB-dependent receptor;protein_id=WP_443797738.1;start_range=.,362;transl_table=11 NZ_CAJZAO010000052.1 RefSeq gene 2106 2456 . - . ID=gene-LDO50_RS07050;Name=LDO50_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07050 NZ_CAJZAO010000052.1 GeneMarkS-2+ CDS 2106 2456 . - 0 ID=cds-WP_224019561.1;Parent=gene-LDO50_RS07050;Dbxref=GenBank:WP_224019561.1;Name=WP_224019561.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS07050;product=hypothetical protein;protein_id=WP_224019561.1;transl_table=11 NZ_CAJZAO010000052.1 RefSeq gene 2647 4374 . + . ID=gene-LDO50_RS07055;Name=LDO50_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07055;old_locus_tag=BVI1335_1450005 NZ_CAJZAO010000052.1 Protein Homology CDS 2647 4374 . + 0 ID=cds-WP_011880613.1;Parent=gene-LDO50_RS07055;Dbxref=GenBank:WP_011880613.1;Name=WP_011880613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372240.1;locus_tag=LDO50_RS07055;product=methanol/ethanol family PQQ-dependent dehydrogenase;protein_id=WP_011880613.1;transl_table=11 NZ_CAJZAO010000052.1 RefSeq gene 4458 5726 . + . ID=gene-LDO50_RS07060;Name=LDO50_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07060;old_locus_tag=BVI1335_1450006 NZ_CAJZAO010000052.1 Protein Homology CDS 4458 5726 . + 0 ID=cds-WP_059497610.1;Parent=gene-LDO50_RS07060;Dbxref=GenBank:WP_059497610.1;Name=WP_059497610.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399101.1;locus_tag=LDO50_RS07060;product=c-type cytochrome;protein_id=WP_059497610.1;transl_table=11 NZ_CAJZAO010000052.1 RefSeq gene 5903 6070 . + . ID=gene-LDO50_RS31345;Name=LDO50_RS31345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31345;partial=true;start_range=.,5903 NZ_CAJZAO010000052.1 Protein Homology CDS 5903 6070 . + 0 ID=cds-WP_443797739.1;Parent=gene-LDO50_RS31345;Dbxref=GenBank:WP_443797739.1;Name=WP_443797739.1;Ontology_term=GO:0019646,GO:0009055;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399102.1;locus_tag=LDO50_RS31345;partial=true;product=high-potential iron-sulfur protein;protein_id=WP_443797739.1;start_range=.,5903;transl_table=11 ##sequence-region NZ_CAJZAO010000053.1 1 461 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000053.1 RefSeq region 1 461 . + . ID=NZ_CAJZAO010000053.1:1..461;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_146 NZ_CAJZAO010000053.1 RefSeq gene 1 132 . - . ID=gene-LDO50_RS31350;Name=LDO50_RS31350;end_range=132,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31350;partial=true;start_range=.,1 NZ_CAJZAO010000053.1 Protein Homology CDS 1 132 . - 2 ID=cds-WP_443797740.1;Parent=gene-LDO50_RS31350;Dbxref=GenBank:WP_443797740.1;Name=WP_443797740.1;end_range=132,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213072.1;locus_tag=LDO50_RS31350;partial=true;product=hypothetical protein;protein_id=WP_443797740.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000053.1 RefSeq pseudogene 143 461 . - . ID=gene-LDO50_RS07070;Name=LDO50_RS07070;end_range=461,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS07070;old_locus_tag=BVI1335_1460002;partial=true;pseudo=true;start_range=.,143 NZ_CAJZAO010000053.1 Protein Homology CDS 143 461 . - 1 ID=cds-LDO50_RS07070;Parent=gene-LDO50_RS07070;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=461,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213072.1;locus_tag=LDO50_RS07070;partial=true;product=dihydrolipoyl dehydrogenase;pseudo=true;start_range=.,143;transl_table=11 ##sequence-region NZ_CAJZAO010000054.1 1 1230 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000054.1 RefSeq region 1 1230 . + . ID=NZ_CAJZAO010000054.1:1..1230;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_147 NZ_CAJZAO010000054.1 RefSeq gene 1 421 . + . ID=gene-LDO50_RS31355;Name=LDO50_RS31355;end_range=421,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31355;partial=true;start_range=.,1 NZ_CAJZAO010000054.1 Protein Homology CDS 1 421 . + 2 ID=cds-WP_443797742.1;Parent=gene-LDO50_RS31355;Dbxref=GenBank:WP_443797742.1;Name=WP_443797742.1;Ontology_term=GO:0016491;end_range=421,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018417516.1;locus_tag=LDO50_RS31355;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_443797742.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000054.1 RefSeq gene 432 1057 . + . ID=gene-LDO50_RS31360;Name=LDO50_RS31360;end_range=1057,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31360;old_locus_tag=BVI1335_1470002;partial=true;start_range=.,432 NZ_CAJZAO010000054.1 Protein Homology CDS 432 1057 . + 0 ID=cds-WP_443797741.1;Parent=gene-LDO50_RS31360;Dbxref=GenBank:WP_443797741.1;Name=WP_443797741.1;Ontology_term=GO:0016491;end_range=1057,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723287.1;locus_tag=LDO50_RS31360;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_443797741.1;start_range=.,432;transl_table=11 NZ_CAJZAO010000054.1 RefSeq gene 1068 1230 . + . ID=gene-LDO50_RS31365;Name=LDO50_RS31365;end_range=1230,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31365;partial=true;start_range=.,1068 NZ_CAJZAO010000054.1 Protein Homology CDS 1068 1230 . + 0 ID=cds-WP_443797743.1;Parent=gene-LDO50_RS31365;Dbxref=GenBank:WP_443797743.1;Name=WP_443797743.1;end_range=1230,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213072.1;locus_tag=LDO50_RS31365;partial=true;product=hypothetical protein;protein_id=WP_443797743.1;start_range=.,1068;transl_table=11 ##sequence-region NZ_CAJZAO010000055.1 1 8378 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000055.1 RefSeq region 1 8378 . + . ID=NZ_CAJZAO010000055.1:1..8378;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_148 NZ_CAJZAO010000055.1 RefSeq gene 136 1327 . - . ID=gene-LDO50_RS07080;Name=LDO50_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07080;old_locus_tag=BVI1335_1480002;partial=true;start_range=.,136 NZ_CAJZAO010000055.1 Protein Homology CDS 136 1327 . - 0 ID=cds-WP_290370691.1;Parent=gene-LDO50_RS07080;Dbxref=GenBank:WP_290370691.1;Name=WP_290370691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661118.1;locus_tag=LDO50_RS07080;partial=true;product=ESPR-type extended signal peptide-containing protein;protein_id=WP_290370691.1;start_range=.,136;transl_table=11 NZ_CAJZAO010000055.1 RefSeq gene 2364 3101 . - . ID=gene-LDO50_RS07085;Name=LDO50_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07085;old_locus_tag=BVI1335_1480004 NZ_CAJZAO010000055.1 Protein Homology CDS 2364 3101 . - 0 ID=cds-WP_045579855.1;Parent=gene-LDO50_RS07085;Dbxref=GenBank:WP_045579855.1;Name=WP_045579855.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012301.6;locus_tag=LDO50_RS07085;product=response regulator transcription factor;protein_id=WP_045579855.1;transl_table=11 NZ_CAJZAO010000055.1 RefSeq gene 3563 8378 . + . ID=gene-LDO50_RS07090;Name=uvrA;end_range=8378,.;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=LDO50_RS07090;partial=true NZ_CAJZAO010000055.1 Protein Homology CDS 3563 8378 . + 0 ID=cds-WP_224019563.1;Parent=gene-LDO50_RS07090;Dbxref=GenBank:WP_224019563.1;Name=WP_224019563.1;Ontology_term=GO:0006289,GO:0003677,GO:0016887,GO:0009380;end_range=8378,.;gbkey=CDS;gene=uvrA;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004544933.1;locus_tag=LDO50_RS07090;partial=true;product=excinuclease ABC subunit UvrA;protein_id=WP_224019563.1;transl_table=11 ##sequence-region NZ_CAJZAO010000056.1 1 3367 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000056.1 RefSeq region 1 3367 . + . ID=NZ_CAJZAO010000056.1:1..3367;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_149 NZ_CAJZAO010000056.1 RefSeq gene 1 196 . - . ID=gene-LDO50_RS31370;Name=LDO50_RS31370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31370;partial=true;start_range=.,1 NZ_CAJZAO010000056.1 GeneMarkS-2+ CDS 1 196 . - 0 ID=cds-WP_443797744.1;Parent=gene-LDO50_RS31370;Dbxref=GenBank:WP_443797744.1;Name=WP_443797744.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS31370;partial=true;product=hypothetical protein;protein_id=WP_443797744.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000056.1 RefSeq gene 232 511 . + . ID=gene-LDO50_RS31375;Name=LDO50_RS31375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31375;partial=true;start_range=.,232 NZ_CAJZAO010000056.1 GeneMarkS-2+ CDS 232 511 . + 1 ID=cds-WP_443797745.1;Parent=gene-LDO50_RS31375;Dbxref=GenBank:WP_443797745.1;Name=WP_443797745.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS31375;partial=true;product=hypothetical protein;protein_id=WP_443797745.1;start_range=.,232;transl_table=11 NZ_CAJZAO010000056.1 RefSeq gene 511 789 . + . ID=gene-LDO50_RS07095;Name=LDO50_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07095;old_locus_tag=BVI1335_1490001 NZ_CAJZAO010000056.1 Protein Homology CDS 511 789 . + 0 ID=cds-WP_045578722.1;Parent=gene-LDO50_RS07095;Dbxref=GenBank:WP_045578722.1;Name=WP_045578722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895862.1;locus_tag=LDO50_RS07095;product=hypothetical protein;protein_id=WP_045578722.1;transl_table=11 NZ_CAJZAO010000056.1 RefSeq gene 839 2959 . + . ID=gene-LDO50_RS07100;Name=LDO50_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07100;old_locus_tag=BVI1335_1490002 NZ_CAJZAO010000056.1 Protein Homology CDS 839 2959 . + 0 ID=cds-WP_212152812.1;Parent=gene-LDO50_RS07100;Dbxref=GenBank:WP_212152812.1;Name=WP_212152812.1;Ontology_term=GO:0034480;gbkey=CDS;go_function=phosphatidylcholine phospholipase C activity|0034480||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760571.1;locus_tag=LDO50_RS07100;product=phosphocholine-specific phospholipase C;protein_id=WP_212152812.1;transl_table=11 NZ_CAJZAO010000056.1 RefSeq gene 2990 3367 . - . ID=gene-LDO50_RS07105;Name=LDO50_RS07105;end_range=3367,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07105;old_locus_tag=BVI1335_1490003;partial=true NZ_CAJZAO010000056.1 Protein Homology CDS 2990 3367 . - 0 ID=cds-WP_224019564.1;Parent=gene-LDO50_RS07105;Dbxref=GenBank:WP_224019564.1;Name=WP_224019564.1;Ontology_term=GO:0016787;end_range=3367,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754267.1;locus_tag=LDO50_RS07105;partial=true;product=RBBP9/YdeN family alpha/beta hydrolase;protein_id=WP_224019564.1;transl_table=11 ##sequence-region NZ_CAJZAO010000057.1 1 31217 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000057.1 RefSeq region 1 31217 . + . ID=NZ_CAJZAO010000057.1:1..31217;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_15 NZ_CAJZAO010000057.1 RefSeq gene 1 315 . + . ID=gene-LDO50_RS07110;Name=LDO50_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07110;partial=true;start_range=.,1 NZ_CAJZAO010000057.1 Protein Homology CDS 1 315 . + 0 ID=cds-WP_224019565.1;Parent=gene-LDO50_RS07110;Dbxref=GenBank:WP_224019565.1;Name=WP_224019565.1;Ontology_term=GO:0018580;gbkey=CDS;go_function=nitronate monooxygenase activity|0018580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414175.1;locus_tag=LDO50_RS07110;partial=true;product=nitronate monooxygenase;protein_id=WP_224019565.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 473 844 . + . ID=gene-LDO50_RS07115;Name=LDO50_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07115;old_locus_tag=BVI1335_150002 NZ_CAJZAO010000057.1 Protein Homology CDS 473 844 . + 0 ID=cds-WP_011884872.1;Parent=gene-LDO50_RS07115;Dbxref=GenBank:WP_011884872.1;Name=WP_011884872.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764300.1;locus_tag=LDO50_RS07115;product=GFA family protein;protein_id=WP_011884872.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 929 1243 . - . ID=gene-LDO50_RS07120;Name=LDO50_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07120 NZ_CAJZAO010000057.1 GeneMarkS-2+ CDS 929 1243 . - 0 ID=cds-WP_224019568.1;Parent=gene-LDO50_RS07120;Dbxref=GenBank:WP_224019568.1;Name=WP_224019568.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS07120;product=hypothetical protein;protein_id=WP_224019568.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 1322 2140 . - . ID=gene-LDO50_RS07125;Name=LDO50_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07125;old_locus_tag=BVI1335_150003 NZ_CAJZAO010000057.1 Protein Homology CDS 1322 2140 . - 0 ID=cds-WP_011884874.1;Parent=gene-LDO50_RS07125;Dbxref=GenBank:WP_011884874.1;Name=WP_011884874.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656921.1;locus_tag=LDO50_RS07125;product=response regulator transcription factor;protein_id=WP_011884874.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 2291 3136 . + . ID=gene-LDO50_RS07130;Name=LDO50_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07130;old_locus_tag=BVI1335_150004 NZ_CAJZAO010000057.1 Protein Homology CDS 2291 3136 . + 0 ID=cds-WP_014723049.1;Parent=gene-LDO50_RS07130;Dbxref=GenBank:WP_014723049.1;Name=WP_014723049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338460.1;locus_tag=LDO50_RS07130;product=carbon-nitrogen hydrolase family protein;protein_id=WP_014723049.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 3273 4613 . + . ID=gene-LDO50_RS07135;Name=LDO50_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07135;old_locus_tag=BVI1335_150005 NZ_CAJZAO010000057.1 Protein Homology CDS 3273 4613 . + 0 ID=cds-WP_060082026.1;Parent=gene-LDO50_RS07135;Dbxref=GenBank:WP_060082026.1;Name=WP_060082026.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404778.1;locus_tag=LDO50_RS07135;product=APC family permease;protein_id=WP_060082026.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 5121 6047 . - . ID=gene-LDO50_RS07140;Name=LDO50_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07140;old_locus_tag=BVI1335_150007 NZ_CAJZAO010000057.1 Protein Homology CDS 5121 6047 . - 0 ID=cds-WP_059562681.1;Parent=gene-LDO50_RS07140;Dbxref=GenBank:WP_059562681.1;Name=WP_059562681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884880.1;locus_tag=LDO50_RS07140;product=LysR family transcriptional regulator;protein_id=WP_059562681.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 6345 7259 . + . ID=gene-LDO50_RS07145;Name=LDO50_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07145;old_locus_tag=BVI1335_150008 NZ_CAJZAO010000057.1 Protein Homology CDS 6345 7259 . + 0 ID=cds-WP_224019566.1;Parent=gene-LDO50_RS07145;Dbxref=GenBank:WP_224019566.1;Name=WP_224019566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884882.1;locus_tag=LDO50_RS07145;product=SphA family protein;protein_id=WP_224019566.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 7311 8474 . + . ID=gene-LDO50_RS07150;Name=LDO50_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07150;old_locus_tag=BVI1335_150009 NZ_CAJZAO010000057.1 Protein Homology CDS 7311 8474 . + 0 ID=cds-WP_014723051.1;Parent=gene-LDO50_RS07150;Dbxref=GenBank:WP_014723051.1;Name=WP_014723051.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723051.1;locus_tag=LDO50_RS07150;product=alpha/beta hydrolase family protein;protein_id=WP_014723051.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 8501 9451 . + . ID=gene-LDO50_RS07155;Name=LDO50_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07155;old_locus_tag=BVI1335_150010 NZ_CAJZAO010000057.1 Protein Homology CDS 8501 9451 . + 0 ID=cds-WP_059461756.1;Parent=gene-LDO50_RS07155;Dbxref=GenBank:WP_059461756.1;Name=WP_059461756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723052.1;locus_tag=LDO50_RS07155;product=VOC family protein;protein_id=WP_059461756.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 9464 9835 . + . ID=gene-LDO50_RS07160;Name=LDO50_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07160;old_locus_tag=BVI1335_150011 NZ_CAJZAO010000057.1 Protein Homology CDS 9464 9835 . + 0 ID=cds-WP_059734204.1;Parent=gene-LDO50_RS07160;Dbxref=GenBank:WP_059734204.1;Name=WP_059734204.1;Ontology_term=GO:0046872,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884887.1;locus_tag=LDO50_RS07160;product=Rieske (2Fe-2S) protein;protein_id=WP_059734204.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 9855 10985 . + . ID=gene-LDO50_RS07165;Name=LDO50_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07165;old_locus_tag=BVI1335_150012 NZ_CAJZAO010000057.1 Protein Homology CDS 9855 10985 . + 0 ID=cds-WP_224019567.1;Parent=gene-LDO50_RS07165;Dbxref=GenBank:WP_224019567.1;Name=WP_224019567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884888.1;locus_tag=LDO50_RS07165;product=FAD-dependent oxidoreductase;protein_id=WP_224019567.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 11000 12226 . + . ID=gene-LDO50_RS07170;Name=LDO50_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07170;old_locus_tag=BVI1335_150013 NZ_CAJZAO010000057.1 Protein Homology CDS 11000 12226 . + 0 ID=cds-WP_014723055.1;Parent=gene-LDO50_RS07170;Dbxref=GenBank:WP_014723055.1;Name=WP_014723055.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723055.1;locus_tag=LDO50_RS07170;product=MFS transporter;protein_id=WP_014723055.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 12223 13038 . + . ID=gene-LDO50_RS07175;Name=LDO50_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07175;old_locus_tag=BVI1335_150014 NZ_CAJZAO010000057.1 Protein Homology CDS 12223 13038 . + 0 ID=cds-WP_034193142.1;Parent=gene-LDO50_RS07175;Dbxref=GenBank:WP_034193142.1;Name=WP_034193142.1;Ontology_term=GO:0016812,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411927.1;locus_tag=LDO50_RS07175;product=cyclase family protein;protein_id=WP_034193142.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 13035 13631 . + . ID=gene-LDO50_RS07180;Name=LDO50_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07180;old_locus_tag=BVI1335_150015 NZ_CAJZAO010000057.1 Protein Homology CDS 13035 13631 . + 0 ID=cds-WP_059475819.1;Parent=gene-LDO50_RS07180;Dbxref=GenBank:WP_059475819.1;Name=WP_059475819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366561.1;locus_tag=LDO50_RS07180;product=cupin domain-containing protein;protein_id=WP_059475819.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 13628 14668 . + . ID=gene-LDO50_RS07185;Name=LDO50_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07185;old_locus_tag=BVI1335_150016 NZ_CAJZAO010000057.1 Protein Homology CDS 13628 14668 . + 0 ID=cds-WP_059475820.1;Parent=gene-LDO50_RS07185;Dbxref=GenBank:WP_059475820.1;Name=WP_059475820.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723057.1;locus_tag=LDO50_RS07185;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_059475820.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 14665 15666 . + . ID=gene-LDO50_RS07190;Name=LDO50_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07190;old_locus_tag=BVI1335_150017 NZ_CAJZAO010000057.1 Protein Homology CDS 14665 15666 . + 0 ID=cds-WP_059475821.1;Parent=gene-LDO50_RS07190;Dbxref=GenBank:WP_059475821.1;Name=WP_059475821.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017774869.1;locus_tag=LDO50_RS07190;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_059475821.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 15991 17466 . - . ID=gene-LDO50_RS07195;Name=LDO50_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07195;old_locus_tag=BVI1335_150019 NZ_CAJZAO010000057.1 Protein Homology CDS 15991 17466 . - 0 ID=cds-WP_059461785.1;Parent=gene-LDO50_RS07195;Dbxref=GenBank:WP_059461785.1;Name=WP_059461785.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336742.1;locus_tag=LDO50_RS07195;product=ISNCY family transposase;protein_id=WP_059461785.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 17772 18260 . - . ID=gene-LDO50_RS07200;Name=LDO50_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07200;old_locus_tag=BVI1335_150021 NZ_CAJZAO010000057.1 Protein Homology CDS 17772 18260 . - 0 ID=cds-WP_011884894.1;Parent=gene-LDO50_RS07200;Dbxref=GenBank:WP_011884894.1;Name=WP_011884894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764287.1;locus_tag=LDO50_RS07200;product=aminoacyl-tRNA deacylase;protein_id=WP_011884894.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 18720 19007 . + . ID=gene-LDO50_RS07205;Name=LDO50_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07205;old_locus_tag=BVI1335_150022 NZ_CAJZAO010000057.1 Protein Homology CDS 18720 19007 . + 0 ID=cds-WP_011884895.1;Parent=gene-LDO50_RS07205;Dbxref=GenBank:WP_011884895.1;Name=WP_011884895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884895.1;locus_tag=LDO50_RS07205;product=YciI-like protein;protein_id=WP_011884895.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 19016 19993 . - . ID=gene-LDO50_RS07210;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=LDO50_RS07210;old_locus_tag=BVI1335_150024 NZ_CAJZAO010000057.1 Protein Homology CDS 19016 19993 . - 0 ID=cds-WP_034193146.1;Parent=gene-LDO50_RS07210;Dbxref=GenBank:WP_034193146.1;Name=WP_034193146.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909327.1;locus_tag=LDO50_RS07210;product=magnesium/cobalt transporter CorA;protein_id=WP_034193146.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 20175 20321 . + . ID=gene-LDO50_RS07215;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;gene_synonym=ybgT;locus_tag=LDO50_RS07215;old_locus_tag=BVI1335_150025 NZ_CAJZAO010000057.1 Protein Homology CDS 20175 20321 . + 0 ID=cds-WP_014723062.1;Parent=gene-LDO50_RS07215;Dbxref=GenBank:WP_014723062.1;Name=WP_014723062.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755040.1;locus_tag=LDO50_RS07215;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_014723062.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 20318 20935 . + . ID=gene-LDO50_RS07220;Name=LDO50_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07220;old_locus_tag=BVI1335_150023 NZ_CAJZAO010000057.1 Protein Homology CDS 20318 20935 . + 0 ID=cds-WP_011884897.1;Parent=gene-LDO50_RS07220;Dbxref=GenBank:WP_011884897.1;Name=WP_011884897.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884897.1;locus_tag=LDO50_RS07220;product=AAA family ATPase;protein_id=WP_011884897.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 21051 22151 . - . ID=gene-LDO50_RS07230;Name=LDO50_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07230;old_locus_tag=BVI1335_150026 NZ_CAJZAO010000057.1 Protein Homology CDS 21051 22151 . - 0 ID=cds-WP_011884898.1;Parent=gene-LDO50_RS07230;Dbxref=GenBank:WP_011884898.1;Name=WP_011884898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192972.1;locus_tag=LDO50_RS07230;product=saccharopine dehydrogenase family protein;protein_id=WP_011884898.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 22939 23403 . - . ID=gene-LDO50_RS07235;Name=LDO50_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07235;old_locus_tag=BVI1335_150028 NZ_CAJZAO010000057.1 Protein Homology CDS 22939 23403 . - 0 ID=cds-WP_011884899.1;Parent=gene-LDO50_RS07235;Dbxref=GenBank:WP_011884899.1;Name=WP_011884899.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656928.1;locus_tag=LDO50_RS07235;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011884899.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 23753 24283 . + . ID=gene-LDO50_RS07240;Name=LDO50_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07240;old_locus_tag=BVI1335_150029 NZ_CAJZAO010000057.1 Protein Homology CDS 23753 24283 . + 0 ID=cds-WP_011884900.1;Parent=gene-LDO50_RS07240;Dbxref=GenBank:WP_011884900.1;Name=WP_011884900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400019.1;locus_tag=LDO50_RS07240;product=Spy/CpxP family protein refolding chaperone;protein_id=WP_011884900.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 24414 24845 . + . ID=gene-LDO50_RS07245;Name=LDO50_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07245;old_locus_tag=BVI1335_150030 NZ_CAJZAO010000057.1 Protein Homology CDS 24414 24845 . + 0 ID=cds-WP_034193149.1;Parent=gene-LDO50_RS07245;Dbxref=GenBank:WP_034193149.1;Name=WP_034193149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896979.1;locus_tag=LDO50_RS07245;product=PGDYG domain-containing protein;protein_id=WP_034193149.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 24904 25266 . - . ID=gene-LDO50_RS07250;Name=LDO50_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07250;old_locus_tag=BVI1335_150031 NZ_CAJZAO010000057.1 Protein Homology CDS 24904 25266 . - 0 ID=cds-WP_011884902.1;Parent=gene-LDO50_RS07250;Dbxref=GenBank:WP_011884902.1;Name=WP_011884902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884902.1;locus_tag=LDO50_RS07250;product=DUF3022 domain-containing protein;protein_id=WP_011884902.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 25280 26068 . - . ID=gene-LDO50_RS07255;Name=LDO50_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07255;old_locus_tag=BVI1335_150032 NZ_CAJZAO010000057.1 Protein Homology CDS 25280 26068 . - 0 ID=cds-WP_059474836.1;Parent=gene-LDO50_RS07255;Dbxref=GenBank:WP_059474836.1;Name=WP_059474836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491183.1;locus_tag=LDO50_RS07255;product=YhfC family intramembrane metalloprotease;protein_id=WP_059474836.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq pseudogene 26122 27085 . - . ID=gene-LDO50_RS07260;Name=LDO50_RS07260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS07260;old_locus_tag=BVI1335_150034;pseudo=true NZ_CAJZAO010000057.1 Protein Homology CDS 26122 27085 . - 0 ID=cds-LDO50_RS07260;Parent=gene-LDO50_RS07260;Note=frameshifted;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192694.1;locus_tag=LDO50_RS07260;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 27387 28352 . - . ID=gene-LDO50_RS07265;Name=LDO50_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07265;old_locus_tag=BVI1335_150035 NZ_CAJZAO010000057.1 Protein Homology CDS 27387 28352 . - 0 ID=cds-WP_124259896.1;Parent=gene-LDO50_RS07265;Dbxref=GenBank:WP_124259896.1;Name=WP_124259896.1;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006475965.1;locus_tag=LDO50_RS07265;product=NAD(P)-dependent oxidoreductase;protein_id=WP_124259896.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 28358 29638 . - . ID=gene-LDO50_RS07270;Name=LDO50_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07270;old_locus_tag=BVI1335_150036 NZ_CAJZAO010000057.1 Protein Homology CDS 28358 29638 . - 0 ID=cds-WP_060043899.1;Parent=gene-LDO50_RS07270;Dbxref=GenBank:WP_060043899.1;Name=WP_060043899.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890952.1;locus_tag=LDO50_RS07270;product=MFS transporter;protein_id=WP_060043899.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq gene 29802 30803 . - . ID=gene-LDO50_RS07275;Name=LDO50_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07275;old_locus_tag=BVI1335_150037 NZ_CAJZAO010000057.1 Protein Homology CDS 29802 30803 . - 0 ID=cds-WP_059890711.1;Parent=gene-LDO50_RS07275;Dbxref=GenBank:WP_059890711.1;Name=WP_059890711.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764274.1;locus_tag=LDO50_RS07275;product=sugar kinase;protein_id=WP_059890711.1;transl_table=11 NZ_CAJZAO010000057.1 RefSeq pseudogene 30832 31217 . - . ID=gene-LDO50_RS07280;Name=LDO50_RS07280;end_range=31217,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS07280;old_locus_tag=BVI1335_150038;partial=true;pseudo=true NZ_CAJZAO010000057.1 Protein Homology CDS 30832 31217 . - 1 ID=cds-LDO50_RS07280;Parent=gene-LDO50_RS07280;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=31217,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191656.1;locus_tag=LDO50_RS07280;partial=true;product=sugar phosphate isomerase/epimerase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000058.1 1 2552 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000058.1 RefSeq region 1 2552 . + . ID=NZ_CAJZAO010000058.1:1..2552;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_150 NZ_CAJZAO010000058.1 RefSeq gene 517 716 . - . ID=gene-LDO50_RS31380;Name=LDO50_RS31380;end_range=716,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31380;partial=true NZ_CAJZAO010000058.1 GeneMarkS-2+ CDS 517 716 . - 2 ID=cds-WP_443797746.1;Parent=gene-LDO50_RS31380;Dbxref=GenBank:WP_443797746.1;Name=WP_443797746.1;end_range=716,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS31380;partial=true;product=hypothetical protein;protein_id=WP_443797746.1;transl_table=11 NZ_CAJZAO010000058.1 RefSeq gene 727 1322 . - . ID=gene-LDO50_RS31385;Name=LDO50_RS31385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31385;old_locus_tag=BVI1335_1500001;partial=true;start_range=.,727 NZ_CAJZAO010000058.1 GeneMarkS-2+ CDS 727 1322 . - 0 ID=cds-WP_443797747.1;Parent=gene-LDO50_RS31385;Dbxref=GenBank:WP_443797747.1;Name=WP_443797747.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS31385;partial=true;product=hypothetical protein;protein_id=WP_443797747.1;start_range=.,727;transl_table=11 NZ_CAJZAO010000058.1 RefSeq gene 1870 2031 . - . ID=gene-LDO50_RS31390;Name=LDO50_RS31390;end_range=2031,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31390;old_locus_tag=BVI1335_1500003;partial=true NZ_CAJZAO010000058.1 Protein Homology CDS 1870 2031 . - 0 ID=cds-WP_443797748.1;Parent=gene-LDO50_RS31390;Dbxref=GenBank:WP_443797748.1;Name=WP_443797748.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;end_range=2031,.;gbkey=CDS;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024786.1;locus_tag=LDO50_RS31390;partial=true;product=Fe-Mn family superoxide dismutase;protein_id=WP_443797748.1;transl_table=11 NZ_CAJZAO010000058.1 RefSeq pseudogene 2042 2317 . - . ID=gene-LDO50_RS31395;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=pseudogene;locus_tag=LDO50_RS31395;old_locus_tag=BVI1335_1500004;partial=true;pseudo=true;start_range=.,2042 NZ_CAJZAO010000058.1 Protein Homology CDS 2042 2317 . - 0 ID=cds-LDO50_RS31395;Parent=gene-LDO50_RS31395;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=sodB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024786.1;locus_tag=LDO50_RS31395;partial=true;product=superoxide dismutase [Fe];pseudo=true;start_range=.,2042;transl_table=11 ##sequence-region NZ_CAJZAO010000059.1 1 34685 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000059.1 RefSeq region 1 34685 . + . ID=NZ_CAJZAO010000059.1:1..34685;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_151 NZ_CAJZAO010000059.1 RefSeq gene 1 346 . - . ID=gene-LDO50_RS07290;Name=LDO50_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07290;partial=true;start_range=.,1 NZ_CAJZAO010000059.1 Protein Homology CDS 1 346 . - 0 ID=cds-WP_253074457.1;Parent=gene-LDO50_RS07290;Dbxref=GenBank:WP_253074457.1;Name=WP_253074457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880141.1;locus_tag=LDO50_RS07290;partial=true;product=rhodanese-like domain-containing protein;protein_id=WP_253074457.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 343 576 . - . ID=gene-LDO50_RS07295;Name=LDO50_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07295;old_locus_tag=BVI1335_1510002 NZ_CAJZAO010000059.1 GeneMarkS-2+ CDS 343 576 . - 0 ID=cds-WP_224019569.1;Parent=gene-LDO50_RS07295;Dbxref=GenBank:WP_224019569.1;Name=WP_224019569.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS07295;product=hypothetical protein;protein_id=WP_224019569.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 573 1115 . - . ID=gene-LDO50_RS07300;Name=LDO50_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07300;old_locus_tag=BVI1335_1510003 NZ_CAJZAO010000059.1 Protein Homology CDS 573 1115 . - 0 ID=cds-WP_059454652.1;Parent=gene-LDO50_RS07300;Dbxref=GenBank:WP_059454652.1;Name=WP_059454652.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880142.1;locus_tag=LDO50_RS07300;product=ankyrin repeat domain-containing protein;protein_id=WP_059454652.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 1260 1868 . - . ID=gene-LDO50_RS07305;Name=LDO50_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07305;old_locus_tag=BVI1335_1510004 NZ_CAJZAO010000059.1 Protein Homology CDS 1260 1868 . - 0 ID=cds-WP_224019570.1;Parent=gene-LDO50_RS07305;Dbxref=GenBank:WP_224019570.1;Name=WP_224019570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725866.1;locus_tag=LDO50_RS07305;product=hypothetical protein;protein_id=WP_224019570.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 1912 2331 . - . ID=gene-LDO50_RS07310;Name=LDO50_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07310;old_locus_tag=BVI1335_1510005 NZ_CAJZAO010000059.1 Protein Homology CDS 1912 2331 . - 0 ID=cds-WP_059493816.1;Parent=gene-LDO50_RS07310;Dbxref=GenBank:WP_059493816.1;Name=WP_059493816.1;Ontology_term=GO:0005344,GO:0019825,GO:0020037,GO:0046872;gbkey=CDS;go_function=oxygen carrier activity|0005344||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880144.1;locus_tag=LDO50_RS07310;product=group II truncated hemoglobin;protein_id=WP_059493816.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 2705 3586 . + . ID=gene-LDO50_RS07315;Name=nifH;gbkey=Gene;gene=nifH;gene_biotype=protein_coding;locus_tag=LDO50_RS07315;old_locus_tag=BVI1335_1510006 NZ_CAJZAO010000059.1 Protein Homology CDS 2705 3586 . + 0 ID=cds-WP_011880146.1;Parent=gene-LDO50_RS07315;Dbxref=GenBank:WP_011880146.1;Name=WP_011880146.1;Ontology_term=GO:0009399,GO:0016163,GO:0016610;gbkey=CDS;gene=nifH;go_component=nitrogenase complex|0016610||IEA;go_function=nitrogenase activity|0016163||IEA;go_process=nitrogen fixation|0009399||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094509.1;locus_tag=LDO50_RS07315;product=nitrogenase iron protein;protein_id=WP_011880146.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 3669 5132 . + . ID=gene-LDO50_RS07320;Name=nifD;gbkey=Gene;gene=nifD;gene_biotype=protein_coding;locus_tag=LDO50_RS07320;old_locus_tag=BVI1335_1510007 NZ_CAJZAO010000059.1 Protein Homology CDS 3669 5132 . + 0 ID=cds-WP_011880147.1;Parent=gene-LDO50_RS07320;Dbxref=GenBank:WP_011880147.1;Name=WP_011880147.1;Ontology_term=GO:0009399,GO:0016163,GO:0016612;gbkey=CDS;gene=nifD;go_component=molybdenum-iron nitrogenase complex|0016612||IEA;go_function=nitrogenase activity|0016163||IEA;go_process=nitrogen fixation|0009399||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011801729.1;locus_tag=LDO50_RS07320;product=nitrogenase molybdenum-iron protein alpha chain;protein_id=WP_011880147.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 5210 6769 . + . ID=gene-LDO50_RS07325;Name=nifK;gbkey=Gene;gene=nifK;gene_biotype=protein_coding;locus_tag=LDO50_RS07325;old_locus_tag=BVI1335_1510008 NZ_CAJZAO010000059.1 Protein Homology CDS 5210 6769 . + 0 ID=cds-WP_011880148.1;Parent=gene-LDO50_RS07325;Dbxref=GenBank:WP_011880148.1;Name=WP_011880148.1;Ontology_term=GO:0009399,GO:0016163,GO:0016612;gbkey=CDS;gene=nifK;go_component=molybdenum-iron nitrogenase complex|0016612||IEA;go_function=nitrogenase activity|0016163||IEA;go_process=nitrogen fixation|0009399||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017773471.1;locus_tag=LDO50_RS07325;product=nitrogenase molybdenum-iron protein subunit beta;protein_id=WP_011880148.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq pseudogene 6783 7022 . + . ID=gene-LDO50_RS07330;Name=LDO50_RS07330;end_range=7022,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS07330;old_locus_tag=BVI1335_1510009;partial=true;pseudo=true NZ_CAJZAO010000059.1 Protein Homology CDS 6783 7022 . + 0 ID=cds-LDO50_RS07330;Parent=gene-LDO50_RS07330;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=7022,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725868.1;locus_tag=LDO50_RS07330;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CAJZAO010000059.1 RefSeq pseudogene 6998 8890 . - . ID=gene-LDO50_RS07335;Name=LDO50_RS07335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS07335;old_locus_tag=BVI1335_1510010;partial=true;pseudo=true;start_range=.,6998 NZ_CAJZAO010000059.1 Protein Homology CDS 6998 8890 . - 0 ID=cds-LDO50_RS07335;Parent=gene-LDO50_RS07335;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399334.1;locus_tag=LDO50_RS07335;partial=true;product=FUSC family protein;pseudo=true;start_range=.,6998;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 8887 9366 . - . ID=gene-LDO50_RS07340;Name=LDO50_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07340;old_locus_tag=BVI1335_1510011 NZ_CAJZAO010000059.1 Protein Homology CDS 8887 9366 . - 0 ID=cds-WP_059581321.1;Parent=gene-LDO50_RS07340;Dbxref=GenBank:WP_059581321.1;Name=WP_059581321.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481010.1;locus_tag=LDO50_RS07340;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_059581321.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 9733 11145 . + . ID=gene-LDO50_RS07345;Name=ehuR;gbkey=Gene;gene=ehuR;gene_biotype=protein_coding;locus_tag=LDO50_RS07345;old_locus_tag=BVI1335_1510012 NZ_CAJZAO010000059.1 Protein Homology CDS 9733 11145 . + 0 ID=cds-WP_176295782.1;Parent=gene-LDO50_RS07345;Dbxref=GenBank:WP_176295782.1;Name=WP_176295782.1;gbkey=CDS;gene=ehuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879624.1;locus_tag=LDO50_RS07345;product=MocR-like ectoine utilization transcription factor EhuR;protein_id=WP_176295782.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 11271 12242 . + . ID=gene-LDO50_RS07350;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=LDO50_RS07350;old_locus_tag=BVI1335_1510013 NZ_CAJZAO010000059.1 Protein Homology CDS 11271 12242 . + 0 ID=cds-WP_059457380.1;Parent=gene-LDO50_RS07350;Dbxref=GenBank:WP_059457380.1;Name=WP_059457380.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372136.1;locus_tag=LDO50_RS07350;product=hydroxyectoine utilization dehydratase EutB;protein_id=WP_059457380.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 12244 13248 . + . ID=gene-LDO50_RS07355;Name=LDO50_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07355;old_locus_tag=BVI1335_1510014 NZ_CAJZAO010000059.1 Protein Homology CDS 12244 13248 . + 0 ID=cds-WP_176295781.1;Parent=gene-LDO50_RS07355;Dbxref=GenBank:WP_176295781.1;Name=WP_176295781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416307.1;locus_tag=LDO50_RS07355;product=cyclodeaminase;protein_id=WP_176295781.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 13259 14467 . + . ID=gene-LDO50_RS07360;Name=doeA;gbkey=Gene;gene=doeA;gene_biotype=protein_coding;locus_tag=LDO50_RS07360;old_locus_tag=BVI1335_1510015 NZ_CAJZAO010000059.1 Protein Homology CDS 13259 14467 . + 0 ID=cds-WP_059457382.1;Parent=gene-LDO50_RS07360;Dbxref=GenBank:WP_059457382.1;Name=WP_059457382.1;Note=DoeA (degradation of ectoine A) is also called EutD (ectoine utilization D).;Ontology_term=GO:0042400;gbkey=CDS;gene=doeA;go_process=ectoine catabolic process|0042400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337137.1;locus_tag=LDO50_RS07360;product=ectoine hydrolase DoeA;protein_id=WP_059457382.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 14472 15509 . + . ID=gene-LDO50_RS07365;Name=doeB;gbkey=Gene;gene=doeB;gene_biotype=protein_coding;locus_tag=LDO50_RS07365;old_locus_tag=BVI1335_1510016 NZ_CAJZAO010000059.1 Protein Homology CDS 14472 15509 . + 0 ID=cds-WP_176295780.1;Parent=gene-LDO50_RS07365;Dbxref=GenBank:WP_176295780.1;Name=WP_176295780.1;Ontology_term=GO:0042400;gbkey=CDS;gene=doeB;go_process=ectoine catabolic process|0042400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549338.1;locus_tag=LDO50_RS07365;product=N(2)-acetyl-L-2%2C4-diaminobutanoate deacetylase DoeB;protein_id=WP_176295780.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 15523 15993 . + . ID=gene-LDO50_RS07370;Name=LDO50_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07370;old_locus_tag=BVI1335_1510017 NZ_CAJZAO010000059.1 Protein Homology CDS 15523 15993 . + 0 ID=cds-WP_011879619.1;Parent=gene-LDO50_RS07370;Dbxref=GenBank:WP_011879619.1;Name=WP_011879619.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372138.1;locus_tag=LDO50_RS07370;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011879619.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 16117 17595 . + . ID=gene-LDO50_RS07375;Name=LDO50_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07375;old_locus_tag=BVI1335_1510018 NZ_CAJZAO010000059.1 Protein Homology CDS 16117 17595 . + 0 ID=cds-WP_176295779.1;Parent=gene-LDO50_RS07375;Dbxref=GenBank:WP_176295779.1;Name=WP_176295779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372139.1;locus_tag=LDO50_RS07375;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_176295779.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 17627 19021 . + . ID=gene-LDO50_RS07380;Name=LDO50_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07380;old_locus_tag=BVI1335_1510019 NZ_CAJZAO010000059.1 Protein Homology CDS 17627 19021 . + 0 ID=cds-WP_176295778.1;Parent=gene-LDO50_RS07380;Dbxref=GenBank:WP_176295778.1;Name=WP_176295778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337133.1;locus_tag=LDO50_RS07380;product=aspartate aminotransferase family protein;protein_id=WP_176295778.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 19262 20962 . + . ID=gene-LDO50_RS07385;Name=LDO50_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07385;old_locus_tag=BVI1335_1510020 NZ_CAJZAO010000059.1 Protein Homology CDS 19262 20962 . + 0 ID=cds-WP_011879616.1;Parent=gene-LDO50_RS07385;Dbxref=GenBank:WP_011879616.1;Name=WP_011879616.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879616.1;locus_tag=LDO50_RS07385;product=methyl-accepting chemotaxis protein;protein_id=WP_011879616.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 21298 22683 . - . ID=gene-LDO50_RS07390;Name=LDO50_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07390;old_locus_tag=BVI1335_1510021 NZ_CAJZAO010000059.1 Protein Homology CDS 21298 22683 . - 0 ID=cds-WP_034194409.1;Parent=gene-LDO50_RS07390;Dbxref=GenBank:WP_034194409.1;Name=WP_034194409.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411412.1;locus_tag=LDO50_RS07390;product=MFS transporter;protein_id=WP_034194409.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq pseudogene 23125 23346 . - . ID=gene-LDO50_RS07395;Name=LDO50_RS07395;end_range=23346,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS07395;old_locus_tag=BVI1335_1510022;partial=true;pseudo=true NZ_CAJZAO010000059.1 Protein Homology CDS 23125 23346 . - 0 ID=cds-LDO50_RS07395;Parent=gene-LDO50_RS07395;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006071,GO:0004371;end_range=23346,.;gbkey=CDS;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725492.1;locus_tag=LDO50_RS07395;partial=true;product=DAK2 domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAO010000059.1 RefSeq pseudogene 23333 23974 . + . ID=gene-LDO50_RS07400;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=pseudogene;locus_tag=LDO50_RS07400;old_locus_tag=BVI1335_1510023;partial=true;pseudo=true;start_range=.,23333 NZ_CAJZAO010000059.1 Protein Homology CDS 23333 23974 . + 0 ID=cds-LDO50_RS07400;Parent=gene-LDO50_RS07400;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0044780,GO:0009424;gbkey=CDS;gene=fliK;go_component=bacterial-type flagellum hook|0009424||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364933.1;locus_tag=LDO50_RS07400;partial=true;product=flagellar hook-length control protein FliK;pseudo=true;start_range=.,23333;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 23971 24282 . + . ID=gene-LDO50_RS07405;Name=LDO50_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07405;old_locus_tag=BVI1335_1510024 NZ_CAJZAO010000059.1 Protein Homology CDS 23971 24282 . + 0 ID=cds-WP_176323168.1;Parent=gene-LDO50_RS07405;Dbxref=GenBank:WP_176323168.1;Name=WP_176323168.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658173.1;locus_tag=LDO50_RS07405;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;protein_id=WP_176323168.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 24575 25309 . + . ID=gene-LDO50_RS07410;Name=LDO50_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07410;old_locus_tag=BVI1335_1510026 NZ_CAJZAO010000059.1 Protein Homology CDS 24575 25309 . + 0 ID=cds-WP_059605764.1;Parent=gene-LDO50_RS07410;Dbxref=GenBank:WP_059605764.1;Name=WP_059605764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402716.1;locus_tag=LDO50_RS07410;product=PepSY-associated TM helix domain-containing protein;protein_id=WP_059605764.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 25368 26393 . - . ID=gene-LDO50_RS07415;Name=LDO50_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07415;old_locus_tag=BVI1335_1510027 NZ_CAJZAO010000059.1 Protein Homology CDS 25368 26393 . - 0 ID=cds-WP_176323167.1;Parent=gene-LDO50_RS07415;Dbxref=GenBank:WP_176323167.1;Name=WP_176323167.1;Ontology_term=GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723832.1;locus_tag=LDO50_RS07415;product=XdhC family protein;protein_id=WP_176323167.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 26731 28137 . - . ID=gene-LDO50_RS07420;Name=LDO50_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07420;old_locus_tag=BVI1335_1510028 NZ_CAJZAO010000059.1 Protein Homology CDS 26731 28137 . - 0 ID=cds-WP_011886294.1;Parent=gene-LDO50_RS07420;Dbxref=GenBank:WP_011886294.1;Name=WP_011886294.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334563.1;locus_tag=LDO50_RS07420;product=amino acid permease;protein_id=WP_011886294.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 28439 29095 . - . ID=gene-LDO50_RS07425;Name=rqpR;gbkey=Gene;gene=rqpR;gene_biotype=protein_coding;locus_tag=LDO50_RS07425;old_locus_tag=BVI1335_1510029 NZ_CAJZAO010000059.1 Protein Homology CDS 28439 29095 . - 0 ID=cds-WP_011886293.1;Parent=gene-LDO50_RS07425;Dbxref=GenBank:WP_011886293.1;Name=WP_011886293.1;Note=The RqpSR system (Regulating Quorum sensing and Pathogenicity Sensor kinase and Response regulator) co-occurs with and modulates the expression of cis-2-dodecenoic acid quorum-sensing systems.;gbkey=CDS;gene=rqpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886293.1;locus_tag=LDO50_RS07425;product=response regulator transcription factor RqpR;protein_id=WP_011886293.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 29103 29918 . - . ID=gene-LDO50_RS07430;Name=rqpS;gbkey=Gene;gene=rqpS;gene_biotype=protein_coding;locus_tag=LDO50_RS07430;old_locus_tag=BVI1335_1510030 NZ_CAJZAO010000059.1 Protein Homology CDS 29103 29918 . - 0 ID=cds-WP_045578700.1;Parent=gene-LDO50_RS07430;Dbxref=GenBank:WP_045578700.1;Name=WP_045578700.1;gbkey=CDS;gene=rqpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482035.1;locus_tag=LDO50_RS07430;product=quorum system sensor histidine kinase RqpS;protein_id=WP_045578700.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 30336 31106 . - . ID=gene-LDO50_RS07435;Name=LDO50_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07435;old_locus_tag=BVI1335_1510031 NZ_CAJZAO010000059.1 Protein Homology CDS 30336 31106 . - 0 ID=cds-WP_011886291.1;Parent=gene-LDO50_RS07435;Dbxref=GenBank:WP_011886291.1;Name=WP_011886291.1;Ontology_term=GO:0004324;gbkey=CDS;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477532.1;locus_tag=LDO50_RS07435;product=ferredoxin--NADP reductase;protein_id=WP_011886291.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 31382 32197 . - . ID=gene-LDO50_RS07440;Name=LDO50_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07440;old_locus_tag=BVI1335_1510032 NZ_CAJZAO010000059.1 Protein Homology CDS 31382 32197 . - 0 ID=cds-WP_011886290.1;Parent=gene-LDO50_RS07440;Dbxref=GenBank:WP_011886290.1;Name=WP_011886290.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353499.1;locus_tag=LDO50_RS07440;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_011886290.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 32203 32691 . - . ID=gene-LDO50_RS07445;Name=LDO50_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07445;old_locus_tag=BVI1335_1510033 NZ_CAJZAO010000059.1 Protein Homology CDS 32203 32691 . - 0 ID=cds-WP_014723829.1;Parent=gene-LDO50_RS07445;Dbxref=GenBank:WP_014723829.1;Name=WP_014723829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546435.1;locus_tag=LDO50_RS07445;product=hypothetical protein;protein_id=WP_014723829.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 32837 33565 . - . ID=gene-LDO50_RS07450;Name=LDO50_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07450;old_locus_tag=BVI1335_1510034 NZ_CAJZAO010000059.1 Protein Homology CDS 32837 33565 . - 0 ID=cds-WP_059605773.1;Parent=gene-LDO50_RS07450;Dbxref=GenBank:WP_059605773.1;Name=WP_059605773.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329402.1;locus_tag=LDO50_RS07450;product=nitroreductase;protein_id=WP_059605773.1;transl_table=11 NZ_CAJZAO010000059.1 RefSeq gene 33802 34685 . + . ID=gene-LDO50_RS07455;Name=LDO50_RS07455;end_range=34685,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07455;partial=true NZ_CAJZAO010000059.1 Protein Homology CDS 33802 34685 . + 0 ID=cds-WP_224019571.1;Parent=gene-LDO50_RS07455;Dbxref=GenBank:WP_224019571.1;Name=WP_224019571.1;Ontology_term=GO:0005524,GO:0016887;end_range=34685,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011857941.1;locus_tag=LDO50_RS07455;partial=true;product=AAA family ATPase;protein_id=WP_224019571.1;transl_table=11 ##sequence-region NZ_CAJZAO010000060.1 1 70203 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000060.1 RefSeq region 1 70203 . + . ID=NZ_CAJZAO010000060.1:1..70203;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_152 NZ_CAJZAO010000060.1 RefSeq gene 1 1013 . + . ID=gene-LDO50_RS07460;Name=LDO50_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07460;old_locus_tag=BVI1335_1520001;partial=true;start_range=.,1 NZ_CAJZAO010000060.1 Protein Homology CDS 1 1013 . + 2 ID=cds-WP_224019572.1;Parent=gene-LDO50_RS07460;Dbxref=GenBank:WP_224019572.1;Name=WP_224019572.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882447.1;locus_tag=LDO50_RS07460;partial=true;product=methyl-accepting chemotaxis protein;protein_id=WP_224019572.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 1336 2058 . - . ID=gene-LDO50_RS07465;Name=LDO50_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07465;old_locus_tag=BVI1335_1520004 NZ_CAJZAO010000060.1 Protein Homology CDS 1336 2058 . - 0 ID=cds-WP_176296036.1;Parent=gene-LDO50_RS07465;Dbxref=GenBank:WP_176296036.1;Name=WP_176296036.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338993.1;locus_tag=LDO50_RS07465;product=polysaccharide deacetylase family protein;protein_id=WP_176296036.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 2660 3793 . - . ID=gene-LDO50_RS07470;Name=LDO50_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07470;old_locus_tag=BVI1335_1520006 NZ_CAJZAO010000060.1 Protein Homology CDS 2660 3793 . - 0 ID=cds-WP_176296037.1;Parent=gene-LDO50_RS07470;Dbxref=GenBank:WP_176296037.1;Name=WP_176296037.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356676.1;locus_tag=LDO50_RS07470;product=glycosyltransferase family 4 protein;protein_id=WP_176296037.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq pseudogene 3889 4008 . + . ID=gene-LDO50_RS07475;Name=LDO50_RS07475;end_range=4008,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS07475;partial=true;pseudo=true;start_range=.,3889 NZ_CAJZAO010000060.1 Protein Homology CDS 3889 4008 . + 0 ID=cds-LDO50_RS07475;Parent=gene-LDO50_RS07475;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4008,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544710.1;locus_tag=LDO50_RS07475;partial=true;product=transposase;pseudo=true;start_range=.,3889;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 4094 4911 . + . ID=gene-LDO50_RS07480;Name=LDO50_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07480 NZ_CAJZAO010000060.1 Protein Homology CDS 4094 4442 . + 0 ID=cds-WP_224019574.1;Parent=gene-LDO50_RS07480;Dbxref=GenBank:WP_224019574.1;Name=WP_224019574.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492354.1;locus_tag=LDO50_RS07480;product=IS5 family transposase;protein_id=WP_224019574.1;transl_table=11 NZ_CAJZAO010000060.1 Protein Homology CDS 4442 4911 . + 2 ID=cds-WP_224019574.1;Parent=gene-LDO50_RS07480;Dbxref=GenBank:WP_224019574.1;Name=WP_224019574.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492354.1;locus_tag=LDO50_RS07480;product=IS5 family transposase;protein_id=WP_224019574.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq pseudogene 4922 5106 . + . ID=gene-LDO50_RS07485;Name=LDO50_RS07485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS07485;partial=true;pseudo=true;start_range=.,4922 NZ_CAJZAO010000060.1 Protein Homology CDS 4922 5106 . + 0 ID=cds-LDO50_RS07485;Parent=gene-LDO50_RS07485;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544710.1;locus_tag=LDO50_RS07485;partial=true;product=IS110 family transposase;pseudo=true;start_range=.,4922;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 5442 7298 . - . ID=gene-LDO50_RS07490;Name=LDO50_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07490;old_locus_tag=BVI1335_1520010 NZ_CAJZAO010000060.1 Protein Homology CDS 5442 7298 . - 0 ID=cds-WP_224019575.1;Parent=gene-LDO50_RS07490;Dbxref=GenBank:WP_224019575.1;Name=WP_224019575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877384.1;locus_tag=LDO50_RS07490;product=clostripain-related cysteine peptidase;protein_id=WP_224019575.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 7510 9249 . - . ID=gene-LDO50_RS07495;Name=LDO50_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07495;old_locus_tag=BVI1335_1520011 NZ_CAJZAO010000060.1 GeneMarkS-2+ CDS 7510 9249 . - 0 ID=cds-WP_176296029.1;Parent=gene-LDO50_RS07495;Dbxref=GenBank:WP_176296029.1;Name=WP_176296029.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS07495;product=hypothetical protein;protein_id=WP_176296029.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 9684 10466 . + . ID=gene-LDO50_RS07500;Name=LDO50_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07500;old_locus_tag=BVI1335_1520014 NZ_CAJZAO010000060.1 Protein Homology CDS 9684 10466 . + 0 ID=cds-WP_224019576.1;Parent=gene-LDO50_RS07500;Dbxref=GenBank:WP_224019576.1;Name=WP_224019576.1;Ontology_term=GO:0000160,GO:0006355,GO:0007165,GO:0000156,GO:0003677,GO:0003700;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734080.1;locus_tag=LDO50_RS07500;product=response regulator transcription factor;protein_id=WP_224019576.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 10686 11465 . + . ID=gene-LDO50_RS07505;Name=LDO50_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07505;old_locus_tag=BVI1335_1520016 NZ_CAJZAO010000060.1 Protein Homology CDS 10686 11465 . + 0 ID=cds-WP_176296030.1;Parent=gene-LDO50_RS07505;Dbxref=GenBank:WP_176296030.1;Name=WP_176296030.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734079.1;locus_tag=LDO50_RS07505;product=response regulator transcription factor;protein_id=WP_176296030.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 11462 14194 . + . ID=gene-LDO50_RS07510;Name=LDO50_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07510;old_locus_tag=BVI1335_1520017 NZ_CAJZAO010000060.1 Protein Homology CDS 11462 14194 . + 0 ID=cds-WP_224019577.1;Parent=gene-LDO50_RS07510;Dbxref=GenBank:WP_224019577.1;Name=WP_224019577.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734078.1;locus_tag=LDO50_RS07510;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_224019577.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 15376 16584 . + . ID=gene-LDO50_RS07515;Name=LDO50_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07515;old_locus_tag=BVI1335_1520020 NZ_CAJZAO010000060.1 Protein Homology CDS 15376 16584 . + 0 ID=cds-WP_176296032.1;Parent=gene-LDO50_RS07515;Dbxref=GenBank:WP_176296032.1;Name=WP_176296032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725232.1;locus_tag=LDO50_RS07515;product=EAL and HDOD domain-containing protein;protein_id=WP_176296032.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 17117 17482 . + . ID=gene-LDO50_RS07520;Name=LDO50_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07520 NZ_CAJZAO010000060.1 GeneMarkS-2+ CDS 17117 17482 . + 0 ID=cds-WP_176296033.1;Parent=gene-LDO50_RS07520;Dbxref=GenBank:WP_176296033.1;Name=WP_176296033.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS07520;product=hypothetical protein;protein_id=WP_176296033.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 17917 19862 . + . ID=gene-LDO50_RS07525;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=LDO50_RS07525;old_locus_tag=BVI1335_1520025;partial=true;start_range=.,17917 NZ_CAJZAO010000060.1 Protein Homology CDS 17917 19862 . + 2 ID=cds-WP_224019586.1;Parent=gene-LDO50_RS07525;Dbxref=GenBank:WP_224019586.1;Name=WP_224019586.1;Ontology_term=GO:0015628,GO:0015627,GO:0019867;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA,outer membrane|0019867||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015004109.1;locus_tag=LDO50_RS07525;partial=true;product=type II secretion system secretin GspD;protein_id=WP_224019586.1;start_range=.,17917;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 20501 21310 . + . ID=gene-LDO50_RS07530;Name=LDO50_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07530;old_locus_tag=BVI1335_1520027 NZ_CAJZAO010000060.1 GeneMarkS-2+ CDS 20501 21310 . + 0 ID=cds-WP_176296034.1;Parent=gene-LDO50_RS07530;Dbxref=GenBank:WP_176296034.1;Name=WP_176296034.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS07530;product=hypothetical protein;protein_id=WP_176296034.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 21325 21543 . + . ID=gene-LDO50_RS07535;Name=LDO50_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07535;old_locus_tag=BVI1335_1520028 NZ_CAJZAO010000060.1 GeneMarkS-2+ CDS 21325 21543 . + 0 ID=cds-WP_059623839.1;Parent=gene-LDO50_RS07535;Dbxref=GenBank:WP_059623839.1;Name=WP_059623839.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS07535;product=hypothetical protein;protein_id=WP_059623839.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 22095 23189 . - . ID=gene-LDO50_RS07540;Name=LDO50_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07540;old_locus_tag=BVI1335_1520029 NZ_CAJZAO010000060.1 Protein Homology CDS 22095 23189 . - 0 ID=cds-WP_140994336.1;Parent=gene-LDO50_RS07540;Dbxref=GenBank:WP_140994336.1;Name=WP_140994336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480109.1;locus_tag=LDO50_RS07540;product=NmrA family NAD(P)-binding protein;protein_id=WP_140994336.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 23371 24288 . - . ID=gene-LDO50_RS07545;Name=LDO50_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07545;old_locus_tag=BVI1335_1520030 NZ_CAJZAO010000060.1 Protein Homology CDS 23371 24288 . - 0 ID=cds-WP_176296035.1;Parent=gene-LDO50_RS07545;Dbxref=GenBank:WP_176296035.1;Name=WP_176296035.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548573.1;locus_tag=LDO50_RS07545;product=DMT family transporter;protein_id=WP_176296035.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 24388 25299 . + . ID=gene-LDO50_RS07550;Name=LDO50_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07550;old_locus_tag=BVI1335_1520032 NZ_CAJZAO010000060.1 Protein Homology CDS 24388 25299 . + 0 ID=cds-WP_042976918.1;Parent=gene-LDO50_RS07550;Dbxref=GenBank:WP_042976918.1;Name=WP_042976918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548572.1;locus_tag=LDO50_RS07550;product=LysR substrate-binding domain-containing protein;protein_id=WP_042976918.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 25957 28464 . + . ID=gene-LDO50_RS07555;Name=LDO50_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07555;old_locus_tag=BVI1335_1520034 NZ_CAJZAO010000060.1 Protein Homology CDS 25957 28464 . + 0 ID=cds-WP_059719222.1;Parent=gene-LDO50_RS07555;Dbxref=GenBank:WP_059719222.1;Name=WP_059719222.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401578.1;locus_tag=LDO50_RS07555;product=type VI secretion system Vgr family protein;protein_id=WP_059719222.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 28525 31272 . + . ID=gene-LDO50_RS07560;Name=LDO50_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07560;old_locus_tag=BVI1335_1520035 NZ_CAJZAO010000060.1 Protein Homology CDS 28525 31272 . + 0 ID=cds-WP_224019578.1;Parent=gene-LDO50_RS07560;Dbxref=GenBank:WP_224019578.1;Name=WP_224019578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013339801.1;locus_tag=LDO50_RS07560;product=lytic transglycosylase domain-containing protein;protein_id=WP_224019578.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 31279 31983 . + . ID=gene-LDO50_RS07565;Name=LDO50_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07565;old_locus_tag=BVI1335_1520036 NZ_CAJZAO010000060.1 Protein Homology CDS 31279 31983 . + 0 ID=cds-WP_224019579.1;Parent=gene-LDO50_RS07565;Dbxref=GenBank:WP_224019579.1;Name=WP_224019579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467498.1;locus_tag=LDO50_RS07565;product=hypothetical protein;protein_id=WP_224019579.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 31980 32231 . + . ID=gene-LDO50_RS07570;Name=LDO50_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07570;old_locus_tag=BVI1335_1520037 NZ_CAJZAO010000060.1 Protein Homology CDS 31980 32231 . + 0 ID=cds-WP_059889984.1;Parent=gene-LDO50_RS07570;Dbxref=GenBank:WP_059889984.1;Name=WP_059889984.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691782.1;locus_tag=LDO50_RS07570;product=PAAR domain-containing protein;protein_id=WP_059889984.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq pseudogene 32443 32574 . - . ID=gene-LDO50_RS07575;Name=LDO50_RS07575;end_range=32574,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS07575;old_locus_tag=BVI1335_1520039;partial=true;pseudo=true NZ_CAJZAO010000060.1 Protein Homology CDS 32443 32574 . - 0 ID=cds-LDO50_RS07575;Parent=gene-LDO50_RS07575;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=32574,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880281.1;locus_tag=LDO50_RS07575;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 33302 34297 . - . ID=gene-LDO50_RS07580;Name=LDO50_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07580;old_locus_tag=BVI1335_1520041 NZ_CAJZAO010000060.1 Protein Homology CDS 33302 34297 . - 0 ID=cds-WP_176296000.1;Parent=gene-LDO50_RS07580;Dbxref=GenBank:WP_176296000.1;Name=WP_176296000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372677.1;locus_tag=LDO50_RS07580;product=hypothetical protein;protein_id=WP_176296000.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 34294 36126 . - . ID=gene-LDO50_RS07585;Name=LDO50_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07585;old_locus_tag=BVI1335_1520042 NZ_CAJZAO010000060.1 Protein Homology CDS 34294 36126 . - 0 ID=cds-WP_176295996.1;Parent=gene-LDO50_RS07585;Dbxref=GenBank:WP_176295996.1;Name=WP_176295996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372676.1;locus_tag=LDO50_RS07585;product=tetratricopeptide repeat protein;protein_id=WP_176295996.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 36123 36914 . - . ID=gene-LDO50_RS07590;Name=LDO50_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07590;old_locus_tag=BVI1335_1520043 NZ_CAJZAO010000060.1 Protein Homology CDS 36123 36914 . - 0 ID=cds-WP_224019580.1;Parent=gene-LDO50_RS07590;Dbxref=GenBank:WP_224019580.1;Name=WP_224019580.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017777612.1;locus_tag=LDO50_RS07590;product=peptidylprolyl isomerase;protein_id=WP_224019580.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 37005 38156 . - . ID=gene-LDO50_RS07595;Name=LDO50_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07595;old_locus_tag=BVI1335_1520044 NZ_CAJZAO010000060.1 Protein Homology CDS 37005 38156 . - 0 ID=cds-WP_176295994.1;Parent=gene-LDO50_RS07595;Dbxref=GenBank:WP_176295994.1;Name=WP_176295994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017777611.1;locus_tag=LDO50_RS07595;product=DUF2827 domain-containing protein;protein_id=WP_176295994.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 38196 39305 . - . ID=gene-LDO50_RS07600;Name=LDO50_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07600;old_locus_tag=BVI1335_1520045 NZ_CAJZAO010000060.1 Protein Homology CDS 38196 39305 . - 0 ID=cds-WP_224019581.1;Parent=gene-LDO50_RS07600;Dbxref=GenBank:WP_224019581.1;Name=WP_224019581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019654601.1;locus_tag=LDO50_RS07600;product=DUF2827 domain-containing protein;protein_id=WP_224019581.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 39302 40444 . - . ID=gene-LDO50_RS07605;Name=LDO50_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07605;old_locus_tag=BVI1335_1520046 NZ_CAJZAO010000060.1 Protein Homology CDS 39302 40444 . - 0 ID=cds-WP_176295992.1;Parent=gene-LDO50_RS07605;Dbxref=GenBank:WP_176295992.1;Name=WP_176295992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007863733.1;locus_tag=LDO50_RS07605;product=DUF2827 family protein;protein_id=WP_176295992.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 40604 41254 . - . ID=gene-LDO50_RS07610;Name=LDO50_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07610;old_locus_tag=BVI1335_1520047 NZ_CAJZAO010000060.1 Protein Homology CDS 40604 41254 . - 0 ID=cds-WP_308117483.1;Parent=gene-LDO50_RS07610;Dbxref=GenBank:WP_308117483.1;Name=WP_308117483.1;Ontology_term=GO:0015288,GO:0042834,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335737.1;locus_tag=LDO50_RS07610;product=OmpA family protein;protein_id=WP_308117483.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 41382 49244 . - . ID=gene-LDO50_RS07615;Name=LDO50_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07615;old_locus_tag=BVI1335_1520048 NZ_CAJZAO010000060.1 Protein Homology CDS 41382 49244 . - 0 ID=cds-WP_224019582.1;Parent=gene-LDO50_RS07615;Dbxref=GenBank:WP_224019582.1;Name=WP_224019582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414054.1;locus_tag=LDO50_RS07615;product=YadA-like family protein;protein_id=WP_224019582.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 49677 50192 . + . ID=gene-LDO50_RS07620;Name=LDO50_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07620 NZ_CAJZAO010000060.1 Protein Homology CDS 49677 50192 . + 0 ID=cds-WP_224019583.1;Parent=gene-LDO50_RS07620;Dbxref=GenBank:WP_224019583.1;Name=WP_224019583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880225.1;locus_tag=LDO50_RS07620;product=hypothetical protein;protein_id=WP_224019583.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 50466 50795 . + . ID=gene-LDO50_RS07625;Name=LDO50_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07625;old_locus_tag=BVI1335_1520054 NZ_CAJZAO010000060.1 GeneMarkS-2+ CDS 50466 50795 . + 0 ID=cds-WP_176295988.1;Parent=gene-LDO50_RS07625;Dbxref=GenBank:WP_176295988.1;Name=WP_176295988.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS07625;product=hypothetical protein;protein_id=WP_176295988.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 50801 50986 . + . ID=gene-LDO50_RS07630;Name=LDO50_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07630;old_locus_tag=BVI1335_1520056 NZ_CAJZAO010000060.1 GeneMarkS-2+ CDS 50801 50986 . + 0 ID=cds-WP_176295987.1;Parent=gene-LDO50_RS07630;Dbxref=GenBank:WP_176295987.1;Name=WP_176295987.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS07630;product=hypothetical protein;protein_id=WP_176295987.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq pseudogene 51213 51431 . + . ID=gene-LDO50_RS07635;Name=LDO50_RS07635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS07635;old_locus_tag=BVI1335_1520057;partial=true;pseudo=true;start_range=.,51213 NZ_CAJZAO010000060.1 Protein Homology CDS 51213 51431 . + 0 ID=cds-LDO50_RS07635;Parent=gene-LDO50_RS07635;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484960.1;locus_tag=LDO50_RS07635;partial=true;product=transposase domain-containing protein;pseudo=true;start_range=.,51213;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 51578 52423 . - . ID=gene-LDO50_RS07640;Name=LDO50_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07640;old_locus_tag=BVI1335_1520058 NZ_CAJZAO010000060.1 Protein Homology CDS 51578 52423 . - 0 ID=cds-WP_176295986.1;Parent=gene-LDO50_RS07640;Dbxref=GenBank:WP_176295986.1;Name=WP_176295986.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336667.1;locus_tag=LDO50_RS07640;product=helix-turn-helix transcriptional regulator;protein_id=WP_176295986.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 52624 53496 . + . ID=gene-LDO50_RS07645;Name=LDO50_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07645;old_locus_tag=BVI1335_1520059 NZ_CAJZAO010000060.1 Protein Homology CDS 52624 53496 . + 0 ID=cds-WP_176295998.1;Parent=gene-LDO50_RS07645;Dbxref=GenBank:WP_176295998.1;Name=WP_176295998.1;Ontology_term=GO:0009058,GO:0016853,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isomerase activity|0016853||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545515.1;locus_tag=LDO50_RS07645;product=PhzF family phenazine biosynthesis protein;protein_id=WP_176295998.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 53500 54960 . + . ID=gene-LDO50_RS07650;Name=LDO50_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07650;old_locus_tag=BVI1335_1520060 NZ_CAJZAO010000060.1 Protein Homology CDS 53500 54960 . + 0 ID=cds-WP_176295985.1;Parent=gene-LDO50_RS07650;Dbxref=GenBank:WP_176295985.1;Name=WP_176295985.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545514.1;locus_tag=LDO50_RS07650;product=ATP-binding protein;protein_id=WP_176295985.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq pseudogene 55234 55854 . - . ID=gene-LDO50_RS07655;Name=LDO50_RS07655;end_range=55854,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS07655;old_locus_tag=BVI1335_1520061;partial=true;pseudo=true NZ_CAJZAO010000060.1 Protein Homology CDS 55234 55854 . - 0 ID=cds-LDO50_RS07655;Parent=gene-LDO50_RS07655;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=55854,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558188.1;locus_tag=LDO50_RS07655;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 56531 57430 . + . ID=gene-LDO50_RS07660;Name=LDO50_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07660;old_locus_tag=BVI1335_1520063 NZ_CAJZAO010000060.1 Protein Homology CDS 56531 57430 . + 0 ID=cds-WP_176295984.1;Parent=gene-LDO50_RS07660;Dbxref=GenBank:WP_176295984.1;Name=WP_176295984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549821.1;locus_tag=LDO50_RS07660;product=LysR substrate-binding domain-containing protein;protein_id=WP_176295984.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 57588 58337 . + . ID=gene-LDO50_RS07665;Name=LDO50_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07665;old_locus_tag=BVI1335_1520064 NZ_CAJZAO010000060.1 Protein Homology CDS 57588 58337 . + 0 ID=cds-WP_176295983.1;Parent=gene-LDO50_RS07665;Dbxref=GenBank:WP_176295983.1;Name=WP_176295983.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020071358.1;locus_tag=LDO50_RS07665;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_176295983.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 58412 59737 . + . ID=gene-LDO50_RS07670;Name=LDO50_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07670;old_locus_tag=BVI1335_1520065 NZ_CAJZAO010000060.1 Protein Homology CDS 58412 59737 . + 0 ID=cds-WP_062885873.1;Parent=gene-LDO50_RS07670;Dbxref=GenBank:WP_062885873.1;Name=WP_062885873.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549819.1;locus_tag=LDO50_RS07670;product=MFS transporter;protein_id=WP_062885873.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 59787 60632 . + . ID=gene-LDO50_RS07675;Name=LDO50_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07675;old_locus_tag=BVI1335_1520066 NZ_CAJZAO010000060.1 Protein Homology CDS 59787 60632 . + 0 ID=cds-WP_176295982.1;Parent=gene-LDO50_RS07675;Dbxref=GenBank:WP_176295982.1;Name=WP_176295982.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659392.1;locus_tag=LDO50_RS07675;product=transketolase;protein_id=WP_176295982.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 60629 61627 . + . ID=gene-LDO50_RS07680;Name=LDO50_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07680;old_locus_tag=BVI1335_1520067 NZ_CAJZAO010000060.1 Protein Homology CDS 60629 61627 . + 0 ID=cds-WP_176295981.1;Parent=gene-LDO50_RS07680;Dbxref=GenBank:WP_176295981.1;Name=WP_176295981.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659391.1;locus_tag=LDO50_RS07680;product=transketolase family protein;protein_id=WP_176295981.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 62044 62352 . - . ID=gene-LDO50_RS07685;Name=LDO50_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07685;old_locus_tag=BVI1335_1520068 NZ_CAJZAO010000060.1 Protein Homology CDS 62044 62352 . - 0 ID=cds-WP_176295980.1;Parent=gene-LDO50_RS07685;Dbxref=GenBank:WP_176295980.1;Name=WP_176295980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548496.1;locus_tag=LDO50_RS07685;product=YciI family protein;protein_id=WP_176295980.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 62365 63009 . - . ID=gene-LDO50_RS07690;Name=LDO50_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07690;old_locus_tag=BVI1335_1520069 NZ_CAJZAO010000060.1 Protein Homology CDS 62365 63009 . - 0 ID=cds-WP_176295979.1;Parent=gene-LDO50_RS07690;Dbxref=GenBank:WP_176295979.1;Name=WP_176295979.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0016491,GO:0050136,GO:0050446;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,azobenzene reductase (NADP+) activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481218.1;locus_tag=LDO50_RS07690;product=FMN-dependent NADH-azoreductase;protein_id=WP_176295979.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 63061 63891 . - . ID=gene-LDO50_RS07695;Name=LDO50_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07695;old_locus_tag=BVI1335_1520070 NZ_CAJZAO010000060.1 Protein Homology CDS 63061 63891 . - 0 ID=cds-WP_176295978.1;Parent=gene-LDO50_RS07695;Dbxref=GenBank:WP_176295978.1;Name=WP_176295978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328547.1;locus_tag=LDO50_RS07695;product=alpha/beta fold hydrolase;protein_id=WP_176295978.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 64014 65060 . + . ID=gene-LDO50_RS07700;Name=LDO50_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07700;old_locus_tag=BVI1335_1520071 NZ_CAJZAO010000060.1 Protein Homology CDS 64014 65060 . + 0 ID=cds-WP_176295977.1;Parent=gene-LDO50_RS07700;Dbxref=GenBank:WP_176295977.1;Name=WP_176295977.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013592151.1;locus_tag=LDO50_RS07700;product=GlxA family transcriptional regulator;protein_id=WP_176295977.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 65187 66170 . - . ID=gene-LDO50_RS07705;Name=LDO50_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07705;old_locus_tag=BVI1335_1520073 NZ_CAJZAO010000060.1 Protein Homology CDS 65187 66170 . - 0 ID=cds-WP_176295976.1;Parent=gene-LDO50_RS07705;Dbxref=GenBank:WP_176295976.1;Name=WP_176295976.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013592145.1;locus_tag=LDO50_RS07705;product=MBL fold metallo-hydrolase;protein_id=WP_176295976.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 66336 67229 . + . ID=gene-LDO50_RS07710;Name=LDO50_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07710;old_locus_tag=BVI1335_1520074 NZ_CAJZAO010000060.1 Protein Homology CDS 66336 67229 . + 0 ID=cds-WP_176295975.1;Parent=gene-LDO50_RS07710;Dbxref=GenBank:WP_176295975.1;Name=WP_176295975.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006157943.1;locus_tag=LDO50_RS07710;product=LysR family transcriptional regulator;protein_id=WP_176295975.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 67412 68401 . - . ID=gene-LDO50_RS07715;Name=LDO50_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07715;old_locus_tag=BVI1335_1520075 NZ_CAJZAO010000060.1 Protein Homology CDS 67412 68401 . - 0 ID=cds-WP_176295974.1;Parent=gene-LDO50_RS07715;Dbxref=GenBank:WP_176295974.1;Name=WP_176295974.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013592152.1;locus_tag=LDO50_RS07715;product=dienelactone hydrolase family protein;protein_id=WP_176295974.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 68538 69617 . - . ID=gene-LDO50_RS07720;Name=hppD;gbkey=Gene;gene=hppD;gene_biotype=protein_coding;locus_tag=LDO50_RS07720;old_locus_tag=BVI1335_1520076 NZ_CAJZAO010000060.1 Protein Homology CDS 68538 69617 . - 0 ID=cds-WP_176295973.1;Parent=gene-LDO50_RS07720;Dbxref=GenBank:WP_176295973.1;Name=WP_176295973.1;Ontology_term=GO:0006559,GO:0006572,GO:0003868;gbkey=CDS;gene=hppD;go_function=4-hydroxyphenylpyruvate dioxygenase activity|0003868||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,L-tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013592153.1;locus_tag=LDO50_RS07720;product=4-hydroxyphenylpyruvate dioxygenase;protein_id=WP_176295973.1;transl_table=11 NZ_CAJZAO010000060.1 RefSeq gene 69644 70203 . - . ID=gene-LDO50_RS07725;Name=LDO50_RS07725;end_range=70203,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07725;old_locus_tag=BVI1335_1520077;partial=true NZ_CAJZAO010000060.1 Protein Homology CDS 69644 70203 . - 2 ID=cds-WP_224019585.1;Parent=gene-LDO50_RS07725;Dbxref=GenBank:WP_224019585.1;Name=WP_224019585.1;Ontology_term=GO:0009055,GO:0050660;end_range=70203,.;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189890.1;locus_tag=LDO50_RS07725;partial=true;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_224019585.1;transl_table=11 ##sequence-region NZ_CAJZAO010000061.1 1 23927 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000061.1 RefSeq region 1 23927 . + . ID=NZ_CAJZAO010000061.1:1..23927;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_153 NZ_CAJZAO010000061.1 RefSeq gene 282 791 . + . ID=gene-LDO50_RS07730;Name=LDO50_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07730;old_locus_tag=BVI1335_1530003 NZ_CAJZAO010000061.1 Protein Homology CDS 282 791 . + 0 ID=cds-WP_176299930.1;Parent=gene-LDO50_RS07730;Dbxref=GenBank:WP_176299930.1;Name=WP_176299930.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661374.1;locus_tag=LDO50_RS07730;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_176299930.1;transl_table=11 NZ_CAJZAO010000061.1 RefSeq gene 814 1962 . + . ID=gene-LDO50_RS07735;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=LDO50_RS07735;old_locus_tag=BVI1335_1530004 NZ_CAJZAO010000061.1 Protein Homology CDS 814 1962 . + 0 ID=cds-WP_176299931.1;Parent=gene-LDO50_RS07735;Dbxref=GenBank:WP_176299931.1;Name=WP_176299931.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548535.1;locus_tag=LDO50_RS07735;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_176299931.1;transl_table=11 NZ_CAJZAO010000061.1 RefSeq gene 2162 3799 . + . ID=gene-LDO50_RS07740;Name=LDO50_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07740;old_locus_tag=BVI1335_1530005 NZ_CAJZAO010000061.1 Protein Homology CDS 2162 3799 . + 0 ID=cds-WP_176321763.1;Parent=gene-LDO50_RS07740;Dbxref=GenBank:WP_176321763.1;Name=WP_176321763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548534.1;locus_tag=LDO50_RS07740;product=acyl-CoA synthetase;protein_id=WP_176321763.1;transl_table=11 NZ_CAJZAO010000061.1 RefSeq gene 3837 4658 . - . ID=gene-LDO50_RS07745;Name=LDO50_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07745;old_locus_tag=BVI1335_1530006 NZ_CAJZAO010000061.1 Protein Homology CDS 3837 4658 . - 0 ID=cds-WP_011694458.1;Parent=gene-LDO50_RS07745;Dbxref=GenBank:WP_011694458.1;Name=WP_011694458.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694458.1;locus_tag=LDO50_RS07745;product=AraC family transcriptional regulator;protein_id=WP_011694458.1;transl_table=11 NZ_CAJZAO010000061.1 RefSeq gene 4877 5641 . + . ID=gene-LDO50_RS07750;Name=LDO50_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07750;old_locus_tag=BVI1335_1530007 NZ_CAJZAO010000061.1 Protein Homology CDS 4877 5641 . + 0 ID=cds-WP_014725460.1;Parent=gene-LDO50_RS07750;Dbxref=GenBank:WP_014725460.1;Name=WP_014725460.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548532.1;locus_tag=LDO50_RS07750;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_014725460.1;transl_table=11 NZ_CAJZAO010000061.1 RefSeq gene 5644 6423 . + . ID=gene-LDO50_RS07755;Name=LDO50_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07755;old_locus_tag=BVI1335_1530008 NZ_CAJZAO010000061.1 Protein Homology CDS 5644 6423 . + 0 ID=cds-WP_046428728.1;Parent=gene-LDO50_RS07755;Dbxref=GenBank:WP_046428728.1;Name=WP_046428728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725459.1;locus_tag=LDO50_RS07755;product=creatininase family protein;protein_id=WP_046428728.1;transl_table=11 NZ_CAJZAO010000061.1 RefSeq gene 6714 7868 . + . ID=gene-LDO50_RS07760;Name=LDO50_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07760;old_locus_tag=BVI1335_1530009 NZ_CAJZAO010000061.1 Protein Homology CDS 6714 7868 . + 0 ID=cds-WP_059695059.1;Parent=gene-LDO50_RS07760;Dbxref=GenBank:WP_059695059.1;Name=WP_059695059.1;Ontology_term=GO:0010181,GO:0016491,GO:0070967;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548530.1;locus_tag=LDO50_RS07760;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_059695059.1;transl_table=11 NZ_CAJZAO010000061.1 RefSeq gene 7873 8661 . + . ID=gene-LDO50_RS07765;Name=LDO50_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07765;old_locus_tag=BVI1335_1530010 NZ_CAJZAO010000061.1 Protein Homology CDS 7873 8661 . + 0 ID=cds-WP_059462786.1;Parent=gene-LDO50_RS07765;Dbxref=GenBank:WP_059462786.1;Name=WP_059462786.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882678.1;locus_tag=LDO50_RS07765;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_059462786.1;transl_table=11 NZ_CAJZAO010000061.1 RefSeq gene 8658 10565 . + . ID=gene-LDO50_RS07770;Name=LDO50_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07770;old_locus_tag=BVI1335_1530011 NZ_CAJZAO010000061.1 Protein Homology CDS 8658 10565 . + 0 ID=cds-WP_224019587.1;Parent=gene-LDO50_RS07770;Dbxref=GenBank:WP_224019587.1;Name=WP_224019587.1;Ontology_term=GO:0005524,GO:0015645;gbkey=CDS;go_function=ATP binding|0005524||IEA,fatty acid ligase activity|0015645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548528.1;locus_tag=LDO50_RS07770;product=AMP-dependent synthetase/ligase;protein_id=WP_224019587.1;transl_table=11 NZ_CAJZAO010000061.1 RefSeq gene 10731 11237 . + . ID=gene-LDO50_RS07775;Name=LDO50_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07775;old_locus_tag=BVI1335_1530012 NZ_CAJZAO010000061.1 Protein Homology CDS 10731 11237 . + 0 ID=cds-WP_224019588.1;Parent=gene-LDO50_RS07775;Dbxref=GenBank:WP_224019588.1;Name=WP_224019588.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882676.1;locus_tag=LDO50_RS07775;product=flavin reductase;protein_id=WP_224019588.1;transl_table=11 NZ_CAJZAO010000061.1 RefSeq gene 11741 12550 . - . ID=gene-LDO50_RS07780;Name=LDO50_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07780;old_locus_tag=BVI1335_1530013 NZ_CAJZAO010000061.1 Protein Homology CDS 11741 12550 . - 0 ID=cds-WP_059457189.1;Parent=gene-LDO50_RS07780;Dbxref=GenBank:WP_059457189.1;Name=WP_059457189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882675.1;locus_tag=LDO50_RS07780;product=alpha/beta fold hydrolase;protein_id=WP_059457189.1;transl_table=11 NZ_CAJZAO010000061.1 RefSeq gene 12658 13209 . + . ID=gene-LDO50_RS07785;Name=LDO50_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07785;old_locus_tag=BVI1335_1530014 NZ_CAJZAO010000061.1 Protein Homology CDS 12658 13209 . + 0 ID=cds-WP_059581826.1;Parent=gene-LDO50_RS07785;Dbxref=GenBank:WP_059581826.1;Name=WP_059581826.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725454.1;locus_tag=LDO50_RS07785;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_059581826.1;transl_table=11 NZ_CAJZAO010000061.1 RefSeq gene 13288 14244 . + . ID=gene-LDO50_RS07790;Name=LDO50_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07790;old_locus_tag=BVI1335_1530015 NZ_CAJZAO010000061.1 Protein Homology CDS 13288 14244 . + 0 ID=cds-WP_011882673.1;Parent=gene-LDO50_RS07790;Dbxref=GenBank:WP_011882673.1;Name=WP_011882673.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423252.1;locus_tag=LDO50_RS07790;product=LysR family transcriptional regulator;protein_id=WP_011882673.1;transl_table=11 NZ_CAJZAO010000061.1 RefSeq gene 14517 15377 . + . ID=gene-LDO50_RS07795;Name=LDO50_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07795;old_locus_tag=BVI1335_1530018 NZ_CAJZAO010000061.1 Protein Homology CDS 14517 15377 . + 0 ID=cds-WP_224019589.1;Parent=gene-LDO50_RS07795;Dbxref=GenBank:WP_224019589.1;Name=WP_224019589.1;Ontology_term=GO:0051213;gbkey=CDS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094232.1;locus_tag=LDO50_RS07795;product=TauD/TfdA family dioxygenase;protein_id=WP_224019589.1;transl_table=11 NZ_CAJZAO010000061.1 RefSeq gene 15374 16849 . + . ID=gene-LDO50_RS07800;Name=LDO50_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07800;old_locus_tag=BVI1335_1530019 NZ_CAJZAO010000061.1 Protein Homology CDS 15374 16849 . + 0 ID=cds-WP_034194522.1;Parent=gene-LDO50_RS07800;Dbxref=GenBank:WP_034194522.1;Name=WP_034194522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882671.1;locus_tag=LDO50_RS07800;product=AMP-binding protein;protein_id=WP_034194522.1;transl_table=11 NZ_CAJZAO010000061.1 RefSeq gene 16864 17490 . + . ID=gene-LDO50_RS07805;Name=LDO50_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07805;old_locus_tag=BVI1335_1530020 NZ_CAJZAO010000061.1 Protein Homology CDS 16864 17490 . + 0 ID=cds-WP_034194523.1;Parent=gene-LDO50_RS07805;Dbxref=GenBank:WP_034194523.1;Name=WP_034194523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733010.1;locus_tag=LDO50_RS07805;product=thermostable hemolysin;protein_id=WP_034194523.1;transl_table=11 NZ_CAJZAO010000061.1 RefSeq gene 17548 18738 . + . ID=gene-LDO50_RS07810;Name=LDO50_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07810;old_locus_tag=BVI1335_1530021 NZ_CAJZAO010000061.1 Protein Homology CDS 17548 18738 . + 0 ID=cds-WP_034194524.1;Parent=gene-LDO50_RS07810;Dbxref=GenBank:WP_034194524.1;Name=WP_034194524.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725449.1;locus_tag=LDO50_RS07810;product=multidrug effflux MFS transporter;protein_id=WP_034194524.1;transl_table=11 NZ_CAJZAO010000061.1 RefSeq gene 18735 19169 . + . ID=gene-LDO50_RS07815;Name=LDO50_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07815;old_locus_tag=BVI1335_1530022 NZ_CAJZAO010000061.1 Protein Homology CDS 18735 19169 . + 0 ID=cds-WP_011882668.1;Parent=gene-LDO50_RS07815;Dbxref=GenBank:WP_011882668.1;Name=WP_011882668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725448.1;locus_tag=LDO50_RS07815;product=hypothetical protein;protein_id=WP_011882668.1;transl_table=11 NZ_CAJZAO010000061.1 RefSeq gene 19329 20432 . + . ID=gene-LDO50_RS07820;Name=LDO50_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07820;old_locus_tag=BVI1335_1530023 NZ_CAJZAO010000061.1 Protein Homology CDS 19329 20432 . + 0 ID=cds-WP_140994298.1;Parent=gene-LDO50_RS07820;Dbxref=GenBank:WP_140994298.1;Name=WP_140994298.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733013.1;locus_tag=LDO50_RS07820;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_140994298.1;transl_table=11 NZ_CAJZAO010000061.1 RefSeq gene 20429 23515 . + . ID=gene-LDO50_RS07825;Name=LDO50_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07825;old_locus_tag=BVI1335_1530024 NZ_CAJZAO010000061.1 Protein Homology CDS 20429 23515 . + 0 ID=cds-WP_224019590.1;Parent=gene-LDO50_RS07825;Dbxref=GenBank:WP_224019590.1;Name=WP_224019590.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882666.1;locus_tag=LDO50_RS07825;product=efflux RND transporter permease subunit;protein_id=WP_224019590.1;transl_table=11 NZ_CAJZAO010000061.1 RefSeq gene 23563 23927 . + . ID=gene-LDO50_RS07830;Name=LDO50_RS07830;end_range=23927,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07830;partial=true NZ_CAJZAO010000061.1 Protein Homology CDS 23563 23927 . + 0 ID=cds-WP_224019591.1;Parent=gene-LDO50_RS07830;Dbxref=GenBank:WP_224019591.1;Name=WP_224019591.1;Ontology_term=GO:0055085,GO:0015562;end_range=23927,.;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882665.1;locus_tag=LDO50_RS07830;partial=true;product=TolC family protein;protein_id=WP_224019591.1;transl_table=11 ##sequence-region NZ_CAJZAO010000062.1 1 40604 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000062.1 RefSeq region 1 40604 . + . ID=NZ_CAJZAO010000062.1:1..40604;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_154 NZ_CAJZAO010000062.1 RefSeq gene 1 782 . + . ID=gene-LDO50_RS07835;Name=LDO50_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07835;old_locus_tag=BVI1335_1540001;partial=true;start_range=.,1 NZ_CAJZAO010000062.1 Protein Homology CDS 1 782 . + 2 ID=cds-WP_224019592.1;Parent=gene-LDO50_RS07835;Dbxref=GenBank:WP_224019592.1;Name=WP_224019592.1;Ontology_term=GO:0006777,GO:0046872,GO:0061599;gbkey=CDS;go_function=metal ion binding|0046872||IEA,molybdopterin molybdotransferase activity|0061599||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883925.1;locus_tag=LDO50_RS07835;partial=true;product=molybdopterin molybdotransferase MoeA;protein_id=WP_224019592.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 820 1095 . + . ID=gene-LDO50_RS07840;Name=LDO50_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07840;old_locus_tag=BVI1335_1540002 NZ_CAJZAO010000062.1 Protein Homology CDS 820 1095 . + 0 ID=cds-WP_006476519.1;Parent=gene-LDO50_RS07840;Dbxref=GenBank:WP_006476519.1;Name=WP_006476519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192965.1;locus_tag=LDO50_RS07840;product=hypothetical protein;protein_id=WP_006476519.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 1092 1577 . + . ID=gene-LDO50_RS07845;Name=LDO50_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07845;old_locus_tag=BVI1335_1540003 NZ_CAJZAO010000062.1 Protein Homology CDS 1092 1577 . + 0 ID=cds-WP_059889180.1;Parent=gene-LDO50_RS07845;Dbxref=GenBank:WP_059889180.1;Name=WP_059889180.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757678.1;locus_tag=LDO50_RS07845;product=GNAT family N-acetyltransferase;protein_id=WP_059889180.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 1690 3165 . - . ID=gene-LDO50_RS07850;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=LDO50_RS07850;old_locus_tag=BVI1335_1540004 NZ_CAJZAO010000062.1 Protein Homology CDS 1690 3165 . - 0 ID=cds-WP_011883921.1;Parent=gene-LDO50_RS07850;Dbxref=GenBank:WP_011883921.1;Name=WP_011883921.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476522.1;locus_tag=LDO50_RS07850;product=DNA recombination protein RmuC;protein_id=WP_011883921.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 3162 4151 . - . ID=gene-LDO50_RS07855;Name=LDO50_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07855;old_locus_tag=BVI1335_1540005 NZ_CAJZAO010000062.1 Protein Homology CDS 3162 4151 . - 0 ID=cds-WP_126220085.1;Parent=gene-LDO50_RS07855;Dbxref=GenBank:WP_126220085.1;Name=WP_126220085.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544923.1;locus_tag=LDO50_RS07855;product=2-hydroxyacid dehydrogenase;protein_id=WP_126220085.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 4232 5662 . - . ID=gene-LDO50_RS07860;Name=LDO50_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07860;old_locus_tag=BVI1335_1540006 NZ_CAJZAO010000062.1 Protein Homology CDS 4232 5662 . - 0 ID=cds-WP_011883917.1;Parent=gene-LDO50_RS07860;Dbxref=GenBank:WP_011883917.1;Name=WP_011883917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764816.1;locus_tag=LDO50_RS07860;product=sodium:proton antiporter;protein_id=WP_011883917.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 5706 6368 . - . ID=gene-LDO50_RS07865;Name=LDO50_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07865;old_locus_tag=BVI1335_1540007 NZ_CAJZAO010000062.1 Protein Homology CDS 5706 6368 . - 0 ID=cds-WP_059668787.1;Parent=gene-LDO50_RS07865;Dbxref=GenBank:WP_059668787.1;Name=WP_059668787.1;Ontology_term=GO:0006089;gbkey=CDS;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363387.1;locus_tag=LDO50_RS07865;product=LutC/YkgG family protein;protein_id=WP_059668787.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 6455 7654 . - . ID=gene-LDO50_RS07870;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=LDO50_RS07870;old_locus_tag=BVI1335_1540008 NZ_CAJZAO010000062.1 Protein Homology CDS 6455 7654 . - 0 ID=cds-WP_034194229.1;Parent=gene-LDO50_RS07870;Dbxref=GenBank:WP_034194229.1;Name=WP_034194229.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656325.1;locus_tag=LDO50_RS07870;product=nicotinate phosphoribosyltransferase;protein_id=WP_034194229.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 7935 8258 . + . ID=gene-LDO50_RS07875;Name=fdxA;gbkey=Gene;gene=fdxA;gene_biotype=protein_coding;locus_tag=LDO50_RS07875;old_locus_tag=BVI1335_1540009 NZ_CAJZAO010000062.1 Protein Homology CDS 7935 8258 . + 0 ID=cds-WP_009688972.1;Parent=gene-LDO50_RS07875;Dbxref=GenBank:WP_009688972.1;Name=WP_009688972.1;Ontology_term=GO:0009055,GO:0051539;gbkey=CDS;gene=fdxA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697054.1;locus_tag=LDO50_RS07875;product=ferredoxin FdxA;protein_id=WP_009688972.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 8516 9001 . + . ID=gene-LDO50_RS07880;Name=LDO50_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07880;old_locus_tag=BVI1335_1540011 NZ_CAJZAO010000062.1 Protein Homology CDS 8516 9001 . + 0 ID=cds-WP_011883909.1;Parent=gene-LDO50_RS07880;Dbxref=GenBank:WP_011883909.1;Name=WP_011883909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656324.1;locus_tag=LDO50_RS07880;product=CreA family protein;protein_id=WP_011883909.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 9062 9964 . + . ID=gene-LDO50_RS07885;Name=LDO50_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07885;old_locus_tag=BVI1335_1540012 NZ_CAJZAO010000062.1 Protein Homology CDS 9062 9964 . + 0 ID=cds-WP_034194230.1;Parent=gene-LDO50_RS07885;Dbxref=GenBank:WP_034194230.1;Name=WP_034194230.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722701.1;locus_tag=LDO50_RS07885;product=AraC family transcriptional regulator;protein_id=WP_034194230.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 10219 10998 . + . ID=gene-LDO50_RS07890;Name=LDO50_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07890;old_locus_tag=BVI1335_1540014 NZ_CAJZAO010000062.1 Protein Homology CDS 10219 10998 . + 0 ID=cds-WP_011883905.1;Parent=gene-LDO50_RS07890;Dbxref=GenBank:WP_011883905.1;Name=WP_011883905.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694222.1;locus_tag=LDO50_RS07890;product=AzlC family ABC transporter permease;protein_id=WP_011883905.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 10995 11333 . + . ID=gene-LDO50_RS07895;Name=LDO50_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07895;old_locus_tag=BVI1335_1540013 NZ_CAJZAO010000062.1 Protein Homology CDS 10995 11333 . + 0 ID=cds-WP_046422385.1;Parent=gene-LDO50_RS07895;Dbxref=GenBank:WP_046422385.1;Name=WP_046422385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897682.1;locus_tag=LDO50_RS07895;product=AzlD domain-containing protein;protein_id=WP_046422385.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 11492 12262 . + . ID=gene-LDO50_RS07900;Name=LDO50_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07900;old_locus_tag=BVI1335_1540015 NZ_CAJZAO010000062.1 Protein Homology CDS 11492 12262 . + 0 ID=cds-WP_059475864.1;Parent=gene-LDO50_RS07900;Dbxref=GenBank:WP_059475864.1;Name=WP_059475864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897683.1;locus_tag=LDO50_RS07900;product=DUF4088 family protein;protein_id=WP_059475864.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 12396 12725 . - . ID=gene-LDO50_RS07905;Name=LDO50_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07905;old_locus_tag=BVI1335_1540016 NZ_CAJZAO010000062.1 Protein Homology CDS 12396 12725 . - 0 ID=cds-WP_059462946.1;Parent=gene-LDO50_RS07905;Dbxref=GenBank:WP_059462946.1;Name=WP_059462946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400675.1;locus_tag=LDO50_RS07905;product=hypothetical protein;protein_id=WP_059462946.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 12986 13204 . + . ID=gene-LDO50_RS07910;Name=LDO50_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07910 NZ_CAJZAO010000062.1 Protein Homology CDS 12986 13204 . + 0 ID=cds-WP_006753074.1;Parent=gene-LDO50_RS07910;Dbxref=GenBank:WP_006753074.1;Name=WP_006753074.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753074.1;locus_tag=LDO50_RS07910;product=RNA-binding S4 domain-containing protein;protein_id=WP_006753074.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 13333 14721 . + . ID=gene-LDO50_RS07915;Name=norM;gbkey=Gene;gene=norM;gene_biotype=protein_coding;locus_tag=LDO50_RS07915;old_locus_tag=BVI1335_1540018 NZ_CAJZAO010000062.1 Protein Homology CDS 13333 14721 . + 0 ID=cds-WP_011883895.1;Parent=gene-LDO50_RS07915;Dbxref=GenBank:WP_011883895.1;Name=WP_011883895.1;gbkey=CDS;gene=norM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883895.1;locus_tag=LDO50_RS07915;product=multidrug efflux MATE transporter NorM;protein_id=WP_011883895.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 14889 16283 . + . ID=gene-LDO50_RS07920;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=LDO50_RS07920;old_locus_tag=BVI1335_1540019 NZ_CAJZAO010000062.1 Protein Homology CDS 14889 16283 . + 0 ID=cds-WP_014722698.1;Parent=gene-LDO50_RS07920;Dbxref=GenBank:WP_014722698.1;Name=WP_014722698.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532308.1;locus_tag=LDO50_RS07920;product=class II fumarate hydratase;protein_id=WP_014722698.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 16350 16862 . - . ID=gene-LDO50_RS07925;Name=LDO50_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07925;old_locus_tag=BVI1335_1540020 NZ_CAJZAO010000062.1 Protein Homology CDS 16350 16862 . - 0 ID=cds-WP_011883890.1;Parent=gene-LDO50_RS07925;Dbxref=GenBank:WP_011883890.1;Name=WP_011883890.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400680.1;locus_tag=LDO50_RS07925;product=acyl-CoA thioesterase;protein_id=WP_011883890.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 17123 17263 . - . ID=gene-LDO50_RS07930;Name=LDO50_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07930 NZ_CAJZAO010000062.1 Protein Homology CDS 17123 17263 . - 0 ID=cds-WP_164715996.1;Parent=gene-LDO50_RS07930;Dbxref=GenBank:WP_164715996.1;Name=WP_164715996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400681.1;locus_tag=LDO50_RS07930;product=hypothetical protein;protein_id=WP_164715996.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 17455 18162 . + . ID=gene-LDO50_RS07935;Name=LDO50_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07935;old_locus_tag=BVI1335_1540022 NZ_CAJZAO010000062.1 Protein Homology CDS 17455 18162 . + 0 ID=cds-WP_011883886.1;Parent=gene-LDO50_RS07935;Dbxref=GenBank:WP_011883886.1;Name=WP_011883886.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757661.1;locus_tag=LDO50_RS07935;product=ArsR/SmtB family transcription factor;protein_id=WP_011883886.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq pseudogene 18325 20822 . + . ID=gene-LDO50_RS07940;Name=LDO50_RS07940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS07940;old_locus_tag=BVI1335_1540023;pseudo=true NZ_CAJZAO010000062.1 Protein Homology CDS 18325 20822 . + 0 ID=cds-LDO50_RS07940;Parent=gene-LDO50_RS07940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656312.1;locus_tag=LDO50_RS07940;product=DUF6600 domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 20907 21818 . - . ID=gene-LDO50_RS07945;Name=LDO50_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07945;partial=true;start_range=.,20907 NZ_CAJZAO010000062.1 Protein Homology CDS 20907 21818 . - 0 ID=cds-WP_224019594.1;Parent=gene-LDO50_RS07945;Dbxref=GenBank:WP_224019594.1;Name=WP_224019594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400684.1;locus_tag=LDO50_RS07945;partial=true;product=thymidylate synthase;protein_id=WP_224019594.1;start_range=.,20907;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 21860 23266 . - . ID=gene-LDO50_RS07950;Name=LDO50_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07950;old_locus_tag=BVI1335_1540026 NZ_CAJZAO010000062.1 Protein Homology CDS 21860 23266 . - 0 ID=cds-WP_011883881.1;Parent=gene-LDO50_RS07950;Dbxref=GenBank:WP_011883881.1;Name=WP_011883881.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486860.1;locus_tag=LDO50_RS07950;product=sigma-54 dependent transcriptional regulator;protein_id=WP_011883881.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 23766 24077 . + . ID=gene-LDO50_RS07955;Name=LDO50_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07955;old_locus_tag=BVI1335_1540028 NZ_CAJZAO010000062.1 Protein Homology CDS 23766 24077 . + 0 ID=cds-WP_224019593.1;Parent=gene-LDO50_RS07955;Dbxref=GenBank:WP_224019593.1;Name=WP_224019593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883880.1;locus_tag=LDO50_RS07955;product=hypothetical protein;protein_id=WP_224019593.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 24314 24814 . + . ID=gene-LDO50_RS07960;Name=LDO50_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07960;old_locus_tag=BVI1335_1540030 NZ_CAJZAO010000062.1 Protein Homology CDS 24314 24814 . + 0 ID=cds-WP_011883878.1;Parent=gene-LDO50_RS07960;Dbxref=GenBank:WP_011883878.1;Name=WP_011883878.1;Ontology_term=GO:0046654,GO:0004146,GO:0050661;gbkey=CDS;go_function=dihydrofolate reductase activity|0004146||IEA,NADP binding|0050661||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363371.1;locus_tag=LDO50_RS07960;product=dihydrofolate reductase;protein_id=WP_011883878.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 24897 26267 . - . ID=gene-LDO50_RS07965;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=LDO50_RS07965;old_locus_tag=BVI1335_1540031 NZ_CAJZAO010000062.1 Protein Homology CDS 24897 26267 . - 0 ID=cds-WP_034194233.1;Parent=gene-LDO50_RS07965;Dbxref=GenBank:WP_034194233.1;Name=WP_034194233.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180925.1;locus_tag=LDO50_RS07965;product=metalloprotease PmbA;protein_id=WP_034194233.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 26396 27007 . + . ID=gene-LDO50_RS07970;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=LDO50_RS07970;old_locus_tag=BVI1335_1540032 NZ_CAJZAO010000062.1 Protein Homology CDS 26396 27007 . + 0 ID=cds-WP_272481909.1;Parent=gene-LDO50_RS07970;Dbxref=GenBank:WP_272481909.1;Name=WP_272481909.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363370.1;locus_tag=LDO50_RS07970;product=ribosome biogenesis factor YjgA;protein_id=WP_272481909.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 26991 27599 . + . ID=gene-LDO50_RS07975;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=LDO50_RS07975;old_locus_tag=BVI1335_1540033 NZ_CAJZAO010000062.1 Protein Homology CDS 26991 27599 . + 0 ID=cds-WP_072465390.1;Parent=gene-LDO50_RS07975;Dbxref=GenBank:WP_072465390.1;Name=WP_072465390.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753181.1;locus_tag=LDO50_RS07975;product=molybdopterin adenylyltransferase;protein_id=WP_072465390.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 27625 28227 . - . ID=gene-LDO50_RS07980;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=LDO50_RS07980;old_locus_tag=BVI1335_1540034 NZ_CAJZAO010000062.1 Protein Homology CDS 27625 28227 . - 0 ID=cds-WP_011883871.1;Parent=gene-LDO50_RS07980;Dbxref=GenBank:WP_011883871.1;Name=WP_011883871.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883871.1;locus_tag=LDO50_RS07980;product=oligoribonuclease;protein_id=WP_011883871.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 28345 29604 . + . ID=gene-LDO50_RS07985;Name=LDO50_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07985;old_locus_tag=BVI1335_1540036 NZ_CAJZAO010000062.1 Protein Homology CDS 28345 29604 . + 0 ID=cds-WP_011883870.1;Parent=gene-LDO50_RS07985;Dbxref=GenBank:WP_011883870.1;Name=WP_011883870.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601592.1;locus_tag=LDO50_RS07985;product=M48 family metallopeptidase;protein_id=WP_011883870.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 29601 30542 . + . ID=gene-LDO50_RS07990;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=LDO50_RS07990;old_locus_tag=BVI1335_1540035 NZ_CAJZAO010000062.1 Protein Homology CDS 29601 30542 . + 0 ID=cds-WP_014722692.1;Parent=gene-LDO50_RS07990;Dbxref=GenBank:WP_014722692.1;Name=WP_014722692.1;Ontology_term=GO:0006412,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883868.1;locus_tag=LDO50_RS07990;product=ribosome small subunit-dependent GTPase A;protein_id=WP_014722692.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 30605 30922 . + . ID=gene-LDO50_RS07995;Name=LDO50_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS07995;old_locus_tag=BVI1335_1540037 NZ_CAJZAO010000062.1 Protein Homology CDS 30605 30922 . + 0 ID=cds-WP_011883866.1;Parent=gene-LDO50_RS07995;Dbxref=GenBank:WP_011883866.1;Name=WP_011883866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656301.1;locus_tag=LDO50_RS07995;product=putative signal transducing protein;protein_id=WP_011883866.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 31001 31939 . - . ID=gene-LDO50_RS08000;Name=LDO50_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08000;old_locus_tag=BVI1335_1540038 NZ_CAJZAO010000062.1 Protein Homology CDS 31001 31939 . - 0 ID=cds-WP_011883864.1;Parent=gene-LDO50_RS08000;Dbxref=GenBank:WP_011883864.1;Name=WP_011883864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213825.1;locus_tag=LDO50_RS08000;product=CobD/CbiB family protein;protein_id=WP_011883864.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 32059 32745 . - . ID=gene-LDO50_RS08005;Name=LDO50_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08005;old_locus_tag=BVI1335_1540040 NZ_CAJZAO010000062.1 Protein Homology CDS 32059 32745 . - 0 ID=cds-WP_045579340.1;Parent=gene-LDO50_RS08005;Dbxref=GenBank:WP_045579340.1;Name=WP_045579340.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486824.1;locus_tag=LDO50_RS08005;product=CoA pyrophosphatase;protein_id=WP_045579340.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 32835 33227 . - . ID=gene-LDO50_RS08010;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=LDO50_RS08010;old_locus_tag=BVI1335_1540041 NZ_CAJZAO010000062.1 Protein Homology CDS 32835 33227 . - 0 ID=cds-WP_011883860.1;Parent=gene-LDO50_RS08010;Dbxref=GenBank:WP_011883860.1;Name=WP_011883860.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486838.1;locus_tag=LDO50_RS08010;product=50S ribosomal protein L19;protein_id=WP_011883860.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 33361 34155 . - . ID=gene-LDO50_RS08015;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=LDO50_RS08015;old_locus_tag=BVI1335_1540042 NZ_CAJZAO010000062.1 Protein Homology CDS 33361 34155 . - 0 ID=cds-WP_011883859.1;Parent=gene-LDO50_RS08015;Dbxref=GenBank:WP_011883859.1;Name=WP_011883859.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400700.1;locus_tag=LDO50_RS08015;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_011883859.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 34156 34833 . - . ID=gene-LDO50_RS08020;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=LDO50_RS08020;old_locus_tag=BVI1335_1540043 NZ_CAJZAO010000062.1 Protein Homology CDS 34156 34833 . - 0 ID=cds-WP_046422372.1;Parent=gene-LDO50_RS08020;Dbxref=GenBank:WP_046422372.1;Name=WP_046422372.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527496.1;locus_tag=LDO50_RS08020;product=ribosome maturation factor RimM;protein_id=WP_046422372.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 34876 35130 . - . ID=gene-LDO50_RS08025;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=LDO50_RS08025;old_locus_tag=BVI1335_1540045 NZ_CAJZAO010000062.1 Protein Homology CDS 34876 35130 . - 0 ID=cds-WP_006476550.1;Parent=gene-LDO50_RS08025;Dbxref=GenBank:WP_006476550.1;Name=WP_006476550.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008342343.1;locus_tag=LDO50_RS08025;product=30S ribosomal protein S16;protein_id=WP_006476550.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 35284 36423 . + . ID=gene-LDO50_RS08030;Name=LDO50_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08030;old_locus_tag=BVI1335_1540044 NZ_CAJZAO010000062.1 Protein Homology CDS 35284 36423 . + 0 ID=cds-WP_060090772.1;Parent=gene-LDO50_RS08030;Dbxref=GenBank:WP_060090772.1;Name=WP_060090772.1;Ontology_term=GO:0016901,GO:0070968;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA,pyrroloquinoline quinone binding|0070968||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411865.1;locus_tag=LDO50_RS08030;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_060090772.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 36534 37001 . + . ID=gene-LDO50_RS08035;Name=LDO50_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08035;old_locus_tag=BVI1335_1540046 NZ_CAJZAO010000062.1 Protein Homology CDS 36534 37001 . + 0 ID=cds-WP_011883856.1;Parent=gene-LDO50_RS08035;Dbxref=GenBank:WP_011883856.1;Name=WP_011883856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600966.1;locus_tag=LDO50_RS08035;product=NINE protein;protein_id=WP_011883856.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 37018 38190 . - . ID=gene-LDO50_RS08040;Name=LDO50_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08040;old_locus_tag=BVI1335_1540047 NZ_CAJZAO010000062.1 Protein Homology CDS 37018 38190 . - 0 ID=cds-WP_059460855.1;Parent=gene-LDO50_RS08040;Dbxref=GenBank:WP_059460855.1;Name=WP_059460855.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363360.1;locus_tag=LDO50_RS08040;product=PA0069 family radical SAM protein;protein_id=WP_059460855.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 38284 38772 . - . ID=gene-LDO50_RS08045;Name=LDO50_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08045;old_locus_tag=BVI1335_1540048 NZ_CAJZAO010000062.1 Protein Homology CDS 38284 38772 . - 0 ID=cds-WP_011883853.1;Parent=gene-LDO50_RS08045;Dbxref=GenBank:WP_011883853.1;Name=WP_011883853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351353.1;locus_tag=LDO50_RS08045;product=Lrp/AsnC ligand binding domain-containing protein;protein_id=WP_011883853.1;transl_table=11 NZ_CAJZAO010000062.1 RefSeq gene 38918 40204 . + . ID=gene-LDO50_RS08050;Name=LDO50_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08050;old_locus_tag=BVI1335_1540049 NZ_CAJZAO010000062.1 Protein Homology CDS 38918 40204 . + 0 ID=cds-WP_059460854.1;Parent=gene-LDO50_RS08050;Dbxref=GenBank:WP_059460854.1;Name=WP_059460854.1;Ontology_term=GO:0055130,GO:0008718,GO:0016491,GO:0071949;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=D-alanine catabolic process|0055130||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018433359.1;locus_tag=LDO50_RS08050;product=D-amino acid dehydrogenase;protein_id=WP_059460854.1;transl_table=11 ##sequence-region NZ_CAJZAO010000063.1 1 10066 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000063.1 RefSeq region 1 10066 . + . ID=NZ_CAJZAO010000063.1:1..10066;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_155 NZ_CAJZAO010000063.1 RefSeq pseudogene 1 195 . - . ID=gene-LDO50_RS08055;Name=LDO50_RS08055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS08055;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000063.1 Protein Homology CDS 1 195 . - 0 ID=cds-LDO50_RS08055;Parent=gene-LDO50_RS08055;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880981.1;locus_tag=LDO50_RS08055;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000063.1 RefSeq gene 823 1005 . - . ID=gene-LDO50_RS08060;Name=LDO50_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08060;old_locus_tag=BVI1335_1550003 NZ_CAJZAO010000063.1 Protein Homology CDS 823 1005 . - 0 ID=cds-WP_011880983.1;Parent=gene-LDO50_RS08060;Dbxref=GenBank:WP_011880983.1;Name=WP_011880983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755831.1;locus_tag=LDO50_RS08060;product=hypothetical protein;protein_id=WP_011880983.1;transl_table=11 NZ_CAJZAO010000063.1 RefSeq gene 1260 1679 . - . ID=gene-LDO50_RS08065;Name=LDO50_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08065;old_locus_tag=BVI1335_1550005 NZ_CAJZAO010000063.1 Protein Homology CDS 1260 1679 . - 0 ID=cds-WP_011880984.1;Parent=gene-LDO50_RS08065;Dbxref=GenBank:WP_011880984.1;Name=WP_011880984.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485763.1;locus_tag=LDO50_RS08065;product=HIT family protein;protein_id=WP_011880984.1;transl_table=11 NZ_CAJZAO010000063.1 RefSeq gene 1932 3335 . + . ID=gene-LDO50_RS08070;Name=LDO50_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08070;old_locus_tag=BVI1335_1550004 NZ_CAJZAO010000063.1 Protein Homology CDS 1932 3335 . + 0 ID=cds-WP_224019595.1;Parent=gene-LDO50_RS08070;Dbxref=GenBank:WP_224019595.1;Name=WP_224019595.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724131.1;locus_tag=LDO50_RS08070;product=serine hydrolase domain-containing protein;protein_id=WP_224019595.1;transl_table=11 NZ_CAJZAO010000063.1 RefSeq gene 3387 4010 . - . ID=gene-LDO50_RS08075;Name=LDO50_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08075;old_locus_tag=BVI1335_1550006 NZ_CAJZAO010000063.1 Protein Homology CDS 3387 4010 . - 0 ID=cds-WP_045577639.1;Parent=gene-LDO50_RS08075;Dbxref=GenBank:WP_045577639.1;Name=WP_045577639.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010117595.1;locus_tag=LDO50_RS08075;product=glutathione S-transferase family protein;protein_id=WP_045577639.1;transl_table=11 NZ_CAJZAO010000063.1 RefSeq gene 4323 5525 . + . ID=gene-LDO50_RS08080;Name=fabV;gbkey=Gene;gene=fabV;gene_biotype=protein_coding;locus_tag=LDO50_RS08080;old_locus_tag=BVI1335_1550007 NZ_CAJZAO010000063.1 Protein Homology CDS 4323 5525 . + 0 ID=cds-WP_014724132.1;Parent=gene-LDO50_RS08080;Dbxref=GenBank:WP_014724132.1;Name=WP_014724132.1;Ontology_term=GO:0006633,GO:0004318;gbkey=CDS;gene=fabV;go_function=enoyl-[acyl-carrier-protein] reductase (NADH) activity|0004318||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397317.1;locus_tag=LDO50_RS08080;product=enoyl-ACP reductase FabV;protein_id=WP_014724132.1;transl_table=11 NZ_CAJZAO010000063.1 RefSeq gene 5611 6189 . - . ID=gene-LDO50_RS08085;Name=LDO50_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08085;old_locus_tag=BVI1335_1550008 NZ_CAJZAO010000063.1 Protein Homology CDS 5611 6189 . - 0 ID=cds-WP_175983556.1;Parent=gene-LDO50_RS08085;Dbxref=GenBank:WP_175983556.1;Name=WP_175983556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750631.1;locus_tag=LDO50_RS08085;product=hypothetical protein;protein_id=WP_175983556.1;transl_table=11 NZ_CAJZAO010000063.1 RefSeq gene 6231 6764 . - . ID=gene-LDO50_RS08090;Name=LDO50_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08090;old_locus_tag=BVI1335_1550009 NZ_CAJZAO010000063.1 Protein Homology CDS 6231 6764 . - 0 ID=cds-WP_059475301.1;Parent=gene-LDO50_RS08090;Dbxref=GenBank:WP_059475301.1;Name=WP_059475301.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880989.1;locus_tag=LDO50_RS08090;product=GNAT family N-acetyltransferase;protein_id=WP_059475301.1;transl_table=11 NZ_CAJZAO010000063.1 RefSeq gene 7181 7657 . + . ID=gene-LDO50_RS08095;Name=LDO50_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08095;old_locus_tag=BVI1335_1550010 NZ_CAJZAO010000063.1 Protein Homology CDS 7181 7657 . + 0 ID=cds-WP_034193384.1;Parent=gene-LDO50_RS08095;Dbxref=GenBank:WP_034193384.1;Name=WP_034193384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900875.1;locus_tag=LDO50_RS08095;product=SRPBCC family protein;protein_id=WP_034193384.1;transl_table=11 NZ_CAJZAO010000063.1 RefSeq gene 7796 8434 . + . ID=gene-LDO50_RS08100;Name=LDO50_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08100;old_locus_tag=BVI1335_1550011 NZ_CAJZAO010000063.1 Protein Homology CDS 7796 8434 . + 0 ID=cds-WP_034193385.1;Parent=gene-LDO50_RS08100;Dbxref=GenBank:WP_034193385.1;Name=WP_034193385.1;Ontology_term=GO:1901170,GO:0018845,GO:0043295;gbkey=CDS;go_function=2-hydroxychromene-2-carboxylate isomerase activity|0018845||IEA,glutathione binding|0043295||IEA;go_process=naphthalene catabolic process|1901170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367019.1;locus_tag=LDO50_RS08100;product=2-hydroxychromene-2-carboxylate isomerase;protein_id=WP_034193385.1;transl_table=11 NZ_CAJZAO010000063.1 RefSeq gene 8450 9433 . - . ID=gene-LDO50_RS08105;Name=LDO50_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08105;old_locus_tag=BVI1335_1550012 NZ_CAJZAO010000063.1 Protein Homology CDS 8450 9433 . - 0 ID=cds-WP_224019596.1;Parent=gene-LDO50_RS08105;Dbxref=GenBank:WP_224019596.1;Name=WP_224019596.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880992.1;locus_tag=LDO50_RS08105;product=LysR family transcriptional regulator;protein_id=WP_224019596.1;transl_table=11 NZ_CAJZAO010000063.1 RefSeq pseudogene 9534 9708 . + . ID=gene-LDO50_RS31400;Name=LDO50_RS31400;end_range=9708,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31400;old_locus_tag=BVI1335_1550013;partial=true;pseudo=true NZ_CAJZAO010000063.1 Protein Homology CDS 9534 9708 . + 0 ID=cds-LDO50_RS31400;Parent=gene-LDO50_RS31400;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=9708,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750642.1;locus_tag=LDO50_RS31400;partial=true;product=MFS transporter;pseudo=true;transl_table=11 NZ_CAJZAO010000063.1 RefSeq gene 9719 10066 . + . ID=gene-LDO50_RS08110;Name=LDO50_RS08110;end_range=10066,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08110;partial=true;start_range=.,9719 NZ_CAJZAO010000063.1 Protein Homology CDS 9719 10066 . + 2 ID=cds-WP_443797749.1;Parent=gene-LDO50_RS08110;Dbxref=GenBank:WP_443797749.1;Name=WP_443797749.1;Ontology_term=GO:0055085,GO:0022857;end_range=10066,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724137.1;locus_tag=LDO50_RS08110;partial=true;product=MFS transporter;protein_id=WP_443797749.1;start_range=.,9719;transl_table=11 ##sequence-region NZ_CAJZAO010000064.1 1 10027 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000064.1 RefSeq region 1 10027 . + . ID=NZ_CAJZAO010000064.1:1..10027;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_156 NZ_CAJZAO010000064.1 RefSeq gene 1 2194 . + . ID=gene-LDO50_RS08115;Name=LDO50_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08115;old_locus_tag=BVI1335_1560001;partial=true;start_range=.,1 NZ_CAJZAO010000064.1 Protein Homology CDS 1 2194 . + 1 ID=cds-WP_224019597.1;Parent=gene-LDO50_RS08115;Dbxref=GenBank:WP_224019597.1;Name=WP_224019597.1;Ontology_term=GO:0006812,GO:0042625,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled ion transmembrane transporter activity|0042625||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492246.1;locus_tag=LDO50_RS08115;partial=true;product=heavy metal translocating P-type ATPase;protein_id=WP_224019597.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000064.1 RefSeq gene 2205 2618 . + . ID=gene-LDO50_RS08120;Name=LDO50_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08120;old_locus_tag=BVI1335_1560002 NZ_CAJZAO010000064.1 Protein Homology CDS 2205 2618 . + 0 ID=cds-WP_059671688.1;Parent=gene-LDO50_RS08120;Dbxref=GenBank:WP_059671688.1;Name=WP_059671688.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754013.1;locus_tag=LDO50_RS08120;product=zinc ribbon domain-containing protein;protein_id=WP_059671688.1;transl_table=11 NZ_CAJZAO010000064.1 RefSeq gene 3025 4488 . + . ID=gene-LDO50_RS08125;Name=LDO50_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08125;old_locus_tag=BVI1335_1560003 NZ_CAJZAO010000064.1 Protein Homology CDS 3025 4488 . + 0 ID=cds-WP_045578630.1;Parent=gene-LDO50_RS08125;Dbxref=GenBank:WP_045578630.1;Name=WP_045578630.1;Ontology_term=GO:0055085,GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401442.1;locus_tag=LDO50_RS08125;product=mechanosensitive ion channel;protein_id=WP_045578630.1;transl_table=11 NZ_CAJZAO010000064.1 RefSeq gene 4788 6200 . + . ID=gene-LDO50_RS08130;Name=eat;gbkey=Gene;gene=eat;gene_biotype=protein_coding;locus_tag=LDO50_RS08130;old_locus_tag=BVI1335_1560004 NZ_CAJZAO010000064.1 Protein Homology CDS 4788 6200 . + 0 ID=cds-WP_011882835.1;Parent=gene-LDO50_RS08130;Dbxref=GenBank:WP_011882835.1;Name=WP_011882835.1;Ontology_term=GO:0006865,GO:0015171,GO:0016020;gbkey=CDS;gene=eat;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195858.1;locus_tag=LDO50_RS08130;product=ethanolamine permease;protein_id=WP_011882835.1;transl_table=11 NZ_CAJZAO010000064.1 RefSeq gene 6407 7804 . + . ID=gene-LDO50_RS08135;Name=LDO50_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08135;old_locus_tag=BVI1335_1560007 NZ_CAJZAO010000064.1 Protein Homology CDS 6407 7804 . + 0 ID=cds-WP_011882836.1;Parent=gene-LDO50_RS08135;Dbxref=GenBank:WP_011882836.1;Name=WP_011882836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762947.1;locus_tag=LDO50_RS08135;product=ethanolamine ammonia-lyase subunit EutB;protein_id=WP_011882836.1;transl_table=11 NZ_CAJZAO010000064.1 RefSeq gene 7801 8592 . + . ID=gene-LDO50_RS08140;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=LDO50_RS08140;old_locus_tag=BVI1335_1560006 NZ_CAJZAO010000064.1 Protein Homology CDS 7801 8592 . + 0 ID=cds-WP_011882837.1;Parent=gene-LDO50_RS08140;Dbxref=GenBank:WP_011882837.1;Name=WP_011882837.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882837.1;locus_tag=LDO50_RS08140;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_011882837.1;transl_table=11 NZ_CAJZAO010000064.1 RefSeq gene 8622 9506 . - . ID=gene-LDO50_RS08145;Name=LDO50_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08145;old_locus_tag=BVI1335_1560008 NZ_CAJZAO010000064.1 Protein Homology CDS 8622 9506 . - 0 ID=cds-WP_011882838.1;Parent=gene-LDO50_RS08145;Dbxref=GenBank:WP_011882838.1;Name=WP_011882838.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546777.1;locus_tag=LDO50_RS08145;product=LysR family transcriptional regulator;protein_id=WP_011882838.1;transl_table=11 NZ_CAJZAO010000064.1 RefSeq gene 9653 10027 . + . ID=gene-LDO50_RS08150;Name=LDO50_RS08150;end_range=10027,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08150;partial=true NZ_CAJZAO010000064.1 Protein Homology CDS 9653 10027 . + 0 ID=cds-WP_224019598.1;Parent=gene-LDO50_RS08150;Dbxref=GenBank:WP_224019598.1;Name=WP_224019598.1;Ontology_term=GO:0055085,GO:0022857;end_range=10027,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546776.1;locus_tag=LDO50_RS08150;partial=true;product=MFS transporter;protein_id=WP_224019598.1;transl_table=11 ##sequence-region NZ_CAJZAO010000065.1 1 31968 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000065.1 RefSeq region 1 31968 . + . ID=NZ_CAJZAO010000065.1:1..31968;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_157 NZ_CAJZAO010000065.1 RefSeq gene 1 540 . + . ID=gene-LDO50_RS08155;Name=LDO50_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08155;old_locus_tag=BVI1335_1570001;partial=true;start_range=.,1 NZ_CAJZAO010000065.1 Protein Homology CDS 1 540 . + 0 ID=cds-WP_224019599.1;Parent=gene-LDO50_RS08155;Dbxref=GenBank:WP_224019599.1;Name=WP_224019599.1;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880688.1;locus_tag=LDO50_RS08155;partial=true;product=NAD-binding protein;protein_id=WP_224019599.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000065.1 RefSeq gene 540 1331 . + . ID=gene-LDO50_RS08160;Name=LDO50_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08160;old_locus_tag=BVI1335_1570002 NZ_CAJZAO010000065.1 Protein Homology CDS 540 1331 . + 0 ID=cds-WP_011880687.1;Parent=gene-LDO50_RS08160;Dbxref=GenBank:WP_011880687.1;Name=WP_011880687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354326.1;locus_tag=LDO50_RS08160;product=enoyl-CoA hydratase;protein_id=WP_011880687.1;transl_table=11 NZ_CAJZAO010000065.1 RefSeq gene 1328 2467 . + . ID=gene-LDO50_RS08165;Name=LDO50_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08165;old_locus_tag=BVI1335_1570003 NZ_CAJZAO010000065.1 Protein Homology CDS 1328 2467 . + 0 ID=cds-WP_011880686.1;Parent=gene-LDO50_RS08165;Dbxref=GenBank:WP_011880686.1;Name=WP_011880686.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880686.1;locus_tag=LDO50_RS08165;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_011880686.1;transl_table=11 NZ_CAJZAO010000065.1 RefSeq gene 2792 3523 . + . ID=gene-LDO50_RS08170;Name=LDO50_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08170;old_locus_tag=BVI1335_1570005 NZ_CAJZAO010000065.1 Protein Homology CDS 2792 3523 . + 0 ID=cds-WP_011880685.1;Parent=gene-LDO50_RS08170;Dbxref=GenBank:WP_011880685.1;Name=WP_011880685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009971536.1;locus_tag=LDO50_RS08170;product=ribonuclease T2;protein_id=WP_011880685.1;transl_table=11 NZ_CAJZAO010000065.1 RefSeq gene 3582 4217 . - . ID=gene-LDO50_RS08175;Name=LDO50_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08175;old_locus_tag=BVI1335_1570006 NZ_CAJZAO010000065.1 Protein Homology CDS 3582 4217 . - 0 ID=cds-WP_059695842.1;Parent=gene-LDO50_RS08175;Dbxref=GenBank:WP_059695842.1;Name=WP_059695842.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761697.1;locus_tag=LDO50_RS08175;product=isochorismatase family cysteine hydrolase;protein_id=WP_059695842.1;transl_table=11 NZ_CAJZAO010000065.1 RefSeq gene 4575 4958 . + . ID=gene-LDO50_RS08180;Name=LDO50_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08180;old_locus_tag=BVI1335_1570007 NZ_CAJZAO010000065.1 Protein Homology CDS 4575 4958 . + 0 ID=cds-WP_014723903.1;Parent=gene-LDO50_RS08180;Dbxref=GenBank:WP_014723903.1;Name=WP_014723903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403790.1;locus_tag=LDO50_RS08180;product=hypothetical protein;protein_id=WP_014723903.1;transl_table=11 NZ_CAJZAO010000065.1 RefSeq gene 5207 6031 . - . ID=gene-LDO50_RS08185;Name=LDO50_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08185;old_locus_tag=BVI1335_1570009 NZ_CAJZAO010000065.1 Protein Homology CDS 5207 6031 . - 0 ID=cds-WP_011880682.1;Parent=gene-LDO50_RS08185;Dbxref=GenBank:WP_011880682.1;Name=WP_011880682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880682.1;locus_tag=LDO50_RS08185;product=alpha/beta fold hydrolase;protein_id=WP_011880682.1;transl_table=11 NZ_CAJZAO010000065.1 RefSeq gene 6258 7619 . - . ID=gene-LDO50_RS08190;Name=LDO50_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08190;old_locus_tag=BVI1335_1570010 NZ_CAJZAO010000065.1 Protein Homology CDS 6258 7619 . - 0 ID=cds-WP_011880681.1;Parent=gene-LDO50_RS08190;Dbxref=GenBank:WP_011880681.1;Name=WP_011880681.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880681.1;locus_tag=LDO50_RS08190;product=D-serine ammonia-lyase;protein_id=WP_011880681.1;transl_table=11 NZ_CAJZAO010000065.1 RefSeq gene 7628 9157 . - . ID=gene-LDO50_RS08195;Name=LDO50_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08195;old_locus_tag=BVI1335_1570011 NZ_CAJZAO010000065.1 Protein Homology CDS 7628 9157 . - 0 ID=cds-WP_059460571.1;Parent=gene-LDO50_RS08195;Dbxref=GenBank:WP_059460571.1;Name=WP_059460571.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723900.1;locus_tag=LDO50_RS08195;product=amidase;protein_id=WP_059460571.1;transl_table=11 NZ_CAJZAO010000065.1 RefSeq gene 9246 10172 . - . ID=gene-LDO50_RS08200;Name=LDO50_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08200;old_locus_tag=BVI1335_1570012 NZ_CAJZAO010000065.1 Protein Homology CDS 9246 10172 . - 0 ID=cds-WP_224019600.1;Parent=gene-LDO50_RS08200;Dbxref=GenBank:WP_224019600.1;Name=WP_224019600.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880679.1;locus_tag=LDO50_RS08200;product=LysR family transcriptional regulator;protein_id=WP_224019600.1;transl_table=11 NZ_CAJZAO010000065.1 RefSeq gene 10234 11469 . - . ID=gene-LDO50_RS08205;Name=LDO50_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08205;old_locus_tag=BVI1335_1570013 NZ_CAJZAO010000065.1 Protein Homology CDS 10234 11469 . - 0 ID=cds-WP_224019601.1;Parent=gene-LDO50_RS08205;Dbxref=GenBank:WP_224019601.1;Name=WP_224019601.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723898.1;locus_tag=LDO50_RS08205;product=MFS transporter;protein_id=WP_224019601.1;transl_table=11 NZ_CAJZAO010000065.1 RefSeq gene 11905 13797 . + . ID=gene-LDO50_RS08210;Name=LDO50_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08210;old_locus_tag=BVI1335_1570015 NZ_CAJZAO010000065.1 Protein Homology CDS 11905 13797 . + 0 ID=cds-WP_224019602.1;Parent=gene-LDO50_RS08210;Dbxref=GenBank:WP_224019602.1;Name=WP_224019602.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534797.1;locus_tag=LDO50_RS08210;product=SAM-dependent methyltransferase;protein_id=WP_224019602.1;transl_table=11 NZ_CAJZAO010000065.1 RefSeq gene 13948 14568 . + . ID=gene-LDO50_RS08215;Name=LDO50_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08215;old_locus_tag=BVI1335_1570016 NZ_CAJZAO010000065.1 Protein Homology CDS 13948 14568 . + 0 ID=cds-WP_069240416.1;Parent=gene-LDO50_RS08215;Dbxref=GenBank:WP_069240416.1;Name=WP_069240416.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416813.1;locus_tag=LDO50_RS08215;product=LysE family translocator;protein_id=WP_069240416.1;transl_table=11 NZ_CAJZAO010000065.1 RefSeq pseudogene 14683 16132 . + . ID=gene-LDO50_RS08220;Name=LDO50_RS08220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS08220;old_locus_tag=BVI1335_1570018;pseudo=true NZ_CAJZAO010000065.1 Protein Homology CDS 14683 16132 . + 0 ID=cds-LDO50_RS08220;Parent=gene-LDO50_RS08220;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094623.1;locus_tag=LDO50_RS08220;product=IS1182 family transposase;pseudo=true;transl_table=11 NZ_CAJZAO010000065.1 RefSeq gene 16418 16975 . + . ID=gene-LDO50_RS08225;Name=LDO50_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08225;old_locus_tag=BVI1335_1570020 NZ_CAJZAO010000065.1 GeneMarkS-2+ CDS 16418 16975 . + 0 ID=cds-WP_059474693.1;Parent=gene-LDO50_RS08225;Dbxref=GenBank:WP_059474693.1;Name=WP_059474693.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS08225;product=hypothetical protein;protein_id=WP_059474693.1;transl_table=11 NZ_CAJZAO010000065.1 RefSeq gene 17224 18138 . - . ID=gene-LDO50_RS08230;Name=LDO50_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08230;old_locus_tag=BVI1335_1570021 NZ_CAJZAO010000065.1 Protein Homology CDS 17224 18138 . - 0 ID=cds-WP_011880674.1;Parent=gene-LDO50_RS08230;Dbxref=GenBank:WP_011880674.1;Name=WP_011880674.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530118.1;locus_tag=LDO50_RS08230;product=glutaminase;protein_id=WP_011880674.1;transl_table=11 NZ_CAJZAO010000065.1 RefSeq gene 18359 19069 . + . ID=gene-LDO50_RS08235;Name=LDO50_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08235;old_locus_tag=BVI1335_1570022 NZ_CAJZAO010000065.1 Protein Homology CDS 18359 19069 . + 0 ID=cds-WP_011880673.1;Parent=gene-LDO50_RS08235;Dbxref=GenBank:WP_011880673.1;Name=WP_011880673.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184573.1;locus_tag=LDO50_RS08235;product=response regulator;protein_id=WP_011880673.1;transl_table=11 NZ_CAJZAO010000065.1 RefSeq gene 19137 20267 . + . ID=gene-LDO50_RS08240;Name=LDO50_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08240;old_locus_tag=BVI1335_1570023 NZ_CAJZAO010000065.1 Protein Homology CDS 19137 20267 . + 0 ID=cds-WP_176154264.1;Parent=gene-LDO50_RS08240;Dbxref=GenBank:WP_176154264.1;Name=WP_176154264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880672.1;locus_tag=LDO50_RS08240;product=ATP-binding protein;protein_id=WP_176154264.1;transl_table=11 NZ_CAJZAO010000065.1 RefSeq gene 20280 23495 . - . ID=gene-LDO50_RS08245;Name=LDO50_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08245;old_locus_tag=BVI1335_1570024 NZ_CAJZAO010000065.1 Protein Homology CDS 20280 23495 . - 0 ID=cds-WP_443797750.1;Parent=gene-LDO50_RS08245;Dbxref=GenBank:WP_443797750.1;Name=WP_443797750.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011205438.1;locus_tag=LDO50_RS08245;product=efflux transporter outer membrane subunit;protein_id=WP_443797750.1;transl_table=11 NZ_CAJZAO010000065.1 RefSeq gene 23510 26659 . - . ID=gene-LDO50_RS08250;Name=LDO50_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08250;old_locus_tag=BVI1335_1570025 NZ_CAJZAO010000065.1 Protein Homology CDS 23510 26659 . - 0 ID=cds-WP_011884914.1;Parent=gene-LDO50_RS08250;Dbxref=GenBank:WP_011884914.1;Name=WP_011884914.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352187.1;locus_tag=LDO50_RS08250;product=efflux RND transporter permease subunit;protein_id=WP_011884914.1;transl_table=11 NZ_CAJZAO010000065.1 RefSeq gene 26656 27765 . - . ID=gene-LDO50_RS08255;Name=LDO50_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08255;old_locus_tag=BVI1335_1570026 NZ_CAJZAO010000065.1 Protein Homology CDS 26656 27765 . - 0 ID=cds-WP_014723073.1;Parent=gene-LDO50_RS08255;Dbxref=GenBank:WP_014723073.1;Name=WP_014723073.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538244.1;locus_tag=LDO50_RS08255;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_014723073.1;transl_table=11 NZ_CAJZAO010000065.1 RefSeq gene 27956 28576 . + . ID=gene-LDO50_RS08260;Name=LDO50_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08260;old_locus_tag=BVI1335_1570027 NZ_CAJZAO010000065.1 Protein Homology CDS 27956 28576 . + 0 ID=cds-WP_011884912.1;Parent=gene-LDO50_RS08260;Dbxref=GenBank:WP_011884912.1;Name=WP_011884912.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491184.1;locus_tag=LDO50_RS08260;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011884912.1;transl_table=11 NZ_CAJZAO010000065.1 RefSeq gene 28746 30479 . - . ID=gene-LDO50_RS08265;Name=LDO50_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08265;old_locus_tag=BVI1335_1570028 NZ_CAJZAO010000065.1 Protein Homology CDS 28746 30479 . - 0 ID=cds-WP_034193153.1;Parent=gene-LDO50_RS08265;Dbxref=GenBank:WP_034193153.1;Name=WP_034193153.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467624.1;locus_tag=LDO50_RS08265;product=ClcB-like voltage-gated chloride channel protein;protein_id=WP_034193153.1;transl_table=11 NZ_CAJZAO010000065.1 RefSeq gene 30595 31668 . - . ID=gene-LDO50_RS08270;Name=LDO50_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08270;old_locus_tag=BVI1335_1570030 NZ_CAJZAO010000065.1 Protein Homology CDS 30595 31668 . - 0 ID=cds-WP_051974406.1;Parent=gene-LDO50_RS08270;Dbxref=GenBank:WP_051974406.1;Name=WP_051974406.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549751.1;locus_tag=LDO50_RS08270;product=YeiH family protein;protein_id=WP_051974406.1;transl_table=11 NZ_CAJZAO010000065.1 RefSeq gene 31779 31968 . + . ID=gene-LDO50_RS08275;Name=LDO50_RS08275;end_range=31968,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08275;partial=true NZ_CAJZAO010000065.1 Protein Homology CDS 31779 31968 . + 0 ID=cds-WP_224019604.1;Parent=gene-LDO50_RS08275;Dbxref=GenBank:WP_224019604.1;Name=WP_224019604.1;Ontology_term=GO:0003677;end_range=31968,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328565.1;locus_tag=LDO50_RS08275;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_224019604.1;transl_table=11 ##sequence-region NZ_CAJZAO010000066.1 1 24751 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000066.1 RefSeq region 1 24751 . + . ID=NZ_CAJZAO010000066.1:1..24751;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_158 NZ_CAJZAO010000066.1 RefSeq gene 211 1863 . - . ID=gene-LDO50_RS08280;Name=LDO50_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08280;old_locus_tag=BVI1335_1580002 NZ_CAJZAO010000066.1 Protein Homology CDS 211 1863 . - 0 ID=cds-WP_059695596.1;Parent=gene-LDO50_RS08280;Dbxref=GenBank:WP_059695596.1;Name=WP_059695596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547786.1;locus_tag=LDO50_RS08280;product=acyl-CoA synthetase;protein_id=WP_059695596.1;transl_table=11 NZ_CAJZAO010000066.1 RefSeq gene 2031 2909 . + . ID=gene-LDO50_RS08285;Name=LDO50_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08285;old_locus_tag=BVI1335_1580004 NZ_CAJZAO010000066.1 Protein Homology CDS 2031 2909 . + 0 ID=cds-WP_249179814.1;Parent=gene-LDO50_RS08285;Dbxref=GenBank:WP_249179814.1;Name=WP_249179814.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760008.1;locus_tag=LDO50_RS08285;product=Crp/Fnr family transcriptional regulator;protein_id=WP_249179814.1;transl_table=11 NZ_CAJZAO010000066.1 RefSeq gene 3203 3898 . + . ID=gene-LDO50_RS08290;Name=LDO50_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08290;old_locus_tag=BVI1335_1580006 NZ_CAJZAO010000066.1 Protein Homology CDS 3203 3898 . + 0 ID=cds-WP_014724953.1;Parent=gene-LDO50_RS08290;Dbxref=GenBank:WP_014724953.1;Name=WP_014724953.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882131.1;locus_tag=LDO50_RS08290;product=heavy metal response regulator transcription factor;protein_id=WP_014724953.1;transl_table=11 NZ_CAJZAO010000066.1 RefSeq gene 3895 5337 . + . ID=gene-LDO50_RS08295;Name=LDO50_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08295;old_locus_tag=BVI1335_1580005 NZ_CAJZAO010000066.1 Protein Homology CDS 3895 5337 . + 0 ID=cds-WP_011882130.1;Parent=gene-LDO50_RS08295;Dbxref=GenBank:WP_011882130.1;Name=WP_011882130.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882130.1;locus_tag=LDO50_RS08295;product=heavy metal sensor histidine kinase;protein_id=WP_011882130.1;transl_table=11 NZ_CAJZAO010000066.1 RefSeq gene 5432 6028 . + . ID=gene-LDO50_RS08300;Name=LDO50_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08300;old_locus_tag=BVI1335_1580007 NZ_CAJZAO010000066.1 Protein Homology CDS 5432 6028 . + 0 ID=cds-WP_224019605.1;Parent=gene-LDO50_RS08300;Dbxref=GenBank:WP_224019605.1;Name=WP_224019605.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403632.1;locus_tag=LDO50_RS08300;product=LysE family translocator;protein_id=WP_224019605.1;transl_table=11 NZ_CAJZAO010000066.1 RefSeq gene 6110 6958 . - . ID=gene-LDO50_RS08305;Name=LDO50_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08305;old_locus_tag=BVI1335_1580008 NZ_CAJZAO010000066.1 Protein Homology CDS 6110 6958 . - 0 ID=cds-WP_034193505.1;Parent=gene-LDO50_RS08305;Dbxref=GenBank:WP_034193505.1;Name=WP_034193505.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755616.1;locus_tag=LDO50_RS08305;product=AraC family transcriptional regulator;protein_id=WP_034193505.1;transl_table=11 NZ_CAJZAO010000066.1 RefSeq gene 7118 7912 . + . ID=gene-LDO50_RS08310;Name=LDO50_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08310;old_locus_tag=BVI1335_1580009 NZ_CAJZAO010000066.1 Protein Homology CDS 7118 7912 . + 0 ID=cds-WP_059895006.1;Parent=gene-LDO50_RS08310;Dbxref=GenBank:WP_059895006.1;Name=WP_059895006.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603553.1;locus_tag=LDO50_RS08310;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_059895006.1;transl_table=11 NZ_CAJZAO010000066.1 RefSeq gene 7973 8347 . - . ID=gene-LDO50_RS08315;Name=LDO50_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08315;old_locus_tag=BVI1335_1580010 NZ_CAJZAO010000066.1 Protein Homology CDS 7973 8347 . - 0 ID=cds-WP_011882126.1;Parent=gene-LDO50_RS08315;Dbxref=GenBank:WP_011882126.1;Name=WP_011882126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494939.1;locus_tag=LDO50_RS08315;product=hypothetical protein;protein_id=WP_011882126.1;transl_table=11 NZ_CAJZAO010000066.1 RefSeq gene 8471 9541 . - . ID=gene-LDO50_RS08320;Name=LDO50_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08320;old_locus_tag=BVI1335_1580012 NZ_CAJZAO010000066.1 Protein Homology CDS 8471 9541 . - 0 ID=cds-WP_043292212.1;Parent=gene-LDO50_RS08320;Dbxref=GenBank:WP_043292212.1;Name=WP_043292212.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485660.1;locus_tag=LDO50_RS08320;product=AI-2E family transporter;protein_id=WP_043292212.1;transl_table=11 NZ_CAJZAO010000066.1 RefSeq gene 9681 10790 . - . ID=gene-LDO50_RS08325;Name=LDO50_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08325;old_locus_tag=BVI1335_1580013 NZ_CAJZAO010000066.1 Protein Homology CDS 9681 10790 . - 0 ID=cds-WP_014724959.1;Parent=gene-LDO50_RS08325;Dbxref=GenBank:WP_014724959.1;Name=WP_014724959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494940.1;locus_tag=LDO50_RS08325;product=NADH:flavin oxidoreductase/NADH oxidase;protein_id=WP_014724959.1;transl_table=11 NZ_CAJZAO010000066.1 RefSeq gene 10939 11625 . - . ID=gene-LDO50_RS08330;Name=LDO50_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08330;old_locus_tag=BVI1335_1580014 NZ_CAJZAO010000066.1 Protein Homology CDS 10939 11625 . - 0 ID=cds-WP_011882123.1;Parent=gene-LDO50_RS08330;Dbxref=GenBank:WP_011882123.1;Name=WP_011882123.1;Ontology_term=GO:0019172;gbkey=CDS;go_function=glyoxalase III activity|0019172||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397181.1;locus_tag=LDO50_RS08330;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_011882123.1;transl_table=11 NZ_CAJZAO010000066.1 RefSeq gene 12056 13069 . - . ID=gene-LDO50_RS08335;Name=LDO50_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08335;old_locus_tag=BVI1335_1580015 NZ_CAJZAO010000066.1 Protein Homology CDS 12056 13069 . - 0 ID=cds-WP_224019606.1;Parent=gene-LDO50_RS08335;Dbxref=GenBank:WP_224019606.1;Name=WP_224019606.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882122.1;locus_tag=LDO50_RS08335;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_224019606.1;transl_table=11 NZ_CAJZAO010000066.1 RefSeq gene 13252 14832 . + . ID=gene-LDO50_RS08340;Name=LDO50_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08340;old_locus_tag=BVI1335_1580016 NZ_CAJZAO010000066.1 Protein Homology CDS 13252 14832 . + 0 ID=cds-WP_045578040.1;Parent=gene-LDO50_RS08340;Dbxref=GenBank:WP_045578040.1;Name=WP_045578040.1;Ontology_term=GO:0009758,GO:0050053;gbkey=CDS;go_function=levansucrase activity|0050053||IEA;go_process=carbohydrate utilization|0009758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658715.1;locus_tag=LDO50_RS08340;product=glycoside hydrolase family 68 protein;protein_id=WP_045578040.1;transl_table=11 NZ_CAJZAO010000066.1 RefSeq gene 14987 16633 . + . ID=gene-LDO50_RS08345;Name=LDO50_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08345;old_locus_tag=BVI1335_1580017 NZ_CAJZAO010000066.1 Protein Homology CDS 14987 16633 . + 0 ID=cds-WP_224019607.1;Parent=gene-LDO50_RS08345;Dbxref=GenBank:WP_224019607.1;Name=WP_224019607.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724962.1;locus_tag=LDO50_RS08345;product=glycoside hydrolase family 32 protein;protein_id=WP_224019607.1;transl_table=11 NZ_CAJZAO010000066.1 RefSeq gene 16690 17439 . - . ID=gene-LDO50_RS08350;Name=LDO50_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08350;old_locus_tag=BVI1335_1580018 NZ_CAJZAO010000066.1 Protein Homology CDS 16690 17439 . - 0 ID=cds-WP_034193500.1;Parent=gene-LDO50_RS08350;Dbxref=GenBank:WP_034193500.1;Name=WP_034193500.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338255.1;locus_tag=LDO50_RS08350;product=SDR family oxidoreductase;protein_id=WP_034193500.1;transl_table=11 NZ_CAJZAO010000066.1 RefSeq gene 17583 18500 . - . ID=gene-LDO50_RS08355;Name=LDO50_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08355;old_locus_tag=BVI1335_1580020 NZ_CAJZAO010000066.1 Protein Homology CDS 17583 18500 . - 0 ID=cds-WP_059567797.1;Parent=gene-LDO50_RS08355;Dbxref=GenBank:WP_059567797.1;Name=WP_059567797.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365969.1;locus_tag=LDO50_RS08355;product=LysR family transcriptional regulator;protein_id=WP_059567797.1;transl_table=11 NZ_CAJZAO010000066.1 RefSeq gene 18738 20219 . + . ID=gene-LDO50_RS08360;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=LDO50_RS08360;old_locus_tag=BVI1335_1580019 NZ_CAJZAO010000066.1 Protein Homology CDS 18738 20219 . + 0 ID=cds-WP_059990820.1;Parent=gene-LDO50_RS08360;Dbxref=GenBank:WP_059990820.1;Name=WP_059990820.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485811.1;locus_tag=LDO50_RS08360;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_059990820.1;transl_table=11 NZ_CAJZAO010000066.1 RefSeq gene 20314 20751 . + . ID=gene-LDO50_RS08365;Name=LDO50_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08365;old_locus_tag=BVI1335_1580021 NZ_CAJZAO010000066.1 Protein Homology CDS 20314 20751 . + 0 ID=cds-WP_059461073.1;Parent=gene-LDO50_RS08365;Dbxref=GenBank:WP_059461073.1;Name=WP_059461073.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099649.1;locus_tag=LDO50_RS08365;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_059461073.1;transl_table=11 NZ_CAJZAO010000066.1 RefSeq gene 20762 21187 . + . ID=gene-LDO50_RS08370;Name=LDO50_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08370;old_locus_tag=BVI1335_1580022 NZ_CAJZAO010000066.1 Protein Homology CDS 20762 21187 . + 0 ID=cds-WP_059621730.1;Parent=gene-LDO50_RS08370;Dbxref=GenBank:WP_059621730.1;Name=WP_059621730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882115.1;locus_tag=LDO50_RS08370;product=cupin domain-containing protein;protein_id=WP_059621730.1;transl_table=11 NZ_CAJZAO010000066.1 RefSeq gene 21288 22484 . - . ID=gene-LDO50_RS08375;Name=LDO50_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08375;old_locus_tag=BVI1335_1580023 NZ_CAJZAO010000066.1 Protein Homology CDS 21288 22484 . - 0 ID=cds-WP_011882114.1;Parent=gene-LDO50_RS08375;Dbxref=GenBank:WP_011882114.1;Name=WP_011882114.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365962.1;locus_tag=LDO50_RS08375;product=porin;protein_id=WP_011882114.1;transl_table=11 NZ_CAJZAO010000066.1 RefSeq gene 23004 24071 . - . ID=gene-LDO50_RS08380;Name=LDO50_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08380;old_locus_tag=BVI1335_1580025 NZ_CAJZAO010000066.1 Protein Homology CDS 23004 24071 . - 0 ID=cds-WP_059990947.1;Parent=gene-LDO50_RS08380;Dbxref=GenBank:WP_059990947.1;Name=WP_059990947.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882113.1;locus_tag=LDO50_RS08380;product=phytoene/squalene synthase family protein;protein_id=WP_059990947.1;transl_table=11 NZ_CAJZAO010000066.1 RefSeq pseudogene 24341 24596 . - . ID=gene-LDO50_RS31405;Name=LDO50_RS31405;end_range=24596,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31405;old_locus_tag=BVI1335_1580026;partial=true;pseudo=true NZ_CAJZAO010000066.1 Protein Homology CDS 24341 24596 . - 1 ID=cds-LDO50_RS31405;Parent=gene-LDO50_RS31405;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=24596,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493305.1;locus_tag=LDO50_RS31405;partial=true;product=rhodanese-related sulfurtransferase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000067.1 1 43157 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000067.1 RefSeq region 1 43157 . + . ID=NZ_CAJZAO010000067.1:1..43157;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_159 NZ_CAJZAO010000067.1 RefSeq gene 1 603 . + . ID=gene-LDO50_RS08390;Name=LDO50_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08390;old_locus_tag=BVI1335_1590001;partial=true;start_range=.,1 NZ_CAJZAO010000067.1 Protein Homology CDS 1 603 . + 0 ID=cds-WP_224019609.1;Parent=gene-LDO50_RS08390;Dbxref=GenBank:WP_224019609.1;Name=WP_224019609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547273.1;locus_tag=LDO50_RS08390;partial=true;product=HAD hydrolase-like protein;protein_id=WP_224019609.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 976 1548 . + . ID=gene-LDO50_RS08395;Name=LDO50_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08395;old_locus_tag=BVI1335_1590002 NZ_CAJZAO010000067.1 Protein Homology CDS 976 1548 . + 0 ID=cds-WP_014725422.1;Parent=gene-LDO50_RS08395;Dbxref=GenBank:WP_014725422.1;Name=WP_014725422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760722.1;locus_tag=LDO50_RS08395;product=DUF4142 domain-containing protein;protein_id=WP_014725422.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 1665 2249 . - . ID=gene-LDO50_RS08400;Name=LDO50_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08400;old_locus_tag=BVI1335_1590003 NZ_CAJZAO010000067.1 Protein Homology CDS 1665 2249 . - 0 ID=cds-WP_060081326.1;Parent=gene-LDO50_RS08400;Dbxref=GenBank:WP_060081326.1;Name=WP_060081326.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498978.1;locus_tag=LDO50_RS08400;product=GNAT family N-acetyltransferase;protein_id=WP_060081326.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 2318 3232 . - . ID=gene-LDO50_RS08405;Name=LDO50_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08405;old_locus_tag=BVI1335_1590004 NZ_CAJZAO010000067.1 Protein Homology CDS 2318 3232 . - 0 ID=cds-WP_045577802.1;Parent=gene-LDO50_RS08405;Dbxref=GenBank:WP_045577802.1;Name=WP_045577802.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760720.1;locus_tag=LDO50_RS08405;product=LysR family transcriptional regulator;protein_id=WP_045577802.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 3342 4580 . + . ID=gene-LDO50_RS08410;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=LDO50_RS08410;old_locus_tag=BVI1335_1590005 NZ_CAJZAO010000067.1 Protein Homology CDS 3342 4580 . + 0 ID=cds-WP_046423731.1;Parent=gene-LDO50_RS08410;Dbxref=GenBank:WP_046423731.1;Name=WP_046423731.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760719.1;locus_tag=LDO50_RS08410;product=diaminopimelate decarboxylase;protein_id=WP_046423731.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 4742 5629 . - . ID=gene-LDO50_RS08415;Name=LDO50_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08415;old_locus_tag=BVI1335_1590006 NZ_CAJZAO010000067.1 Protein Homology CDS 4742 5629 . - 0 ID=cds-WP_034194546.1;Parent=gene-LDO50_RS08415;Dbxref=GenBank:WP_034194546.1;Name=WP_034194546.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766260.1;locus_tag=LDO50_RS08415;product=DMT family transporter;protein_id=WP_034194546.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 5755 7221 . + . ID=gene-LDO50_RS08420;Name=LDO50_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08420;old_locus_tag=BVI1335_1590007 NZ_CAJZAO010000067.1 Protein Homology CDS 5755 7221 . + 0 ID=cds-WP_059463037.1;Parent=gene-LDO50_RS08420;Dbxref=GenBank:WP_059463037.1;Name=WP_059463037.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491196.1;locus_tag=LDO50_RS08420;product=aminotransferase-like domain-containing protein;protein_id=WP_059463037.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 7337 8770 . - . ID=gene-LDO50_RS08425;Name=LDO50_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08425;old_locus_tag=BVI1335_1590008 NZ_CAJZAO010000067.1 Protein Homology CDS 7337 8770 . - 0 ID=cds-WP_059668644.1;Parent=gene-LDO50_RS08425;Dbxref=GenBank:WP_059668644.1;Name=WP_059668644.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339667.1;locus_tag=LDO50_RS08425;product=nicotinate phosphoribosyltransferase;protein_id=WP_059668644.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 8845 9885 . - . ID=gene-LDO50_RS08430;Name=LDO50_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08430;old_locus_tag=BVI1335_1590009 NZ_CAJZAO010000067.1 Protein Homology CDS 8845 9885 . - 0 ID=cds-WP_059463035.1;Parent=gene-LDO50_RS08430;Dbxref=GenBank:WP_059463035.1;Name=WP_059463035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366534.1;locus_tag=LDO50_RS08430;product=bifunctional nicotinamide-nucleotide adenylyltransferase/Nudix hydroxylase;protein_id=WP_059463035.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 10214 10975 . + . ID=gene-LDO50_RS08435;Name=LDO50_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08435;old_locus_tag=BVI1335_1590011 NZ_CAJZAO010000067.1 Protein Homology CDS 10214 10975 . + 0 ID=cds-WP_059456013.1;Parent=gene-LDO50_RS08435;Dbxref=GenBank:WP_059456013.1;Name=WP_059456013.1;Ontology_term=GO:0008745,GO:0046872;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659261.1;locus_tag=LDO50_RS08435;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=WP_059456013.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 11025 11414 . + . ID=gene-LDO50_RS08440;Name=LDO50_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08440;old_locus_tag=BVI1335_1590012 NZ_CAJZAO010000067.1 Protein Homology CDS 11025 11414 . + 0 ID=cds-WP_014725429.1;Parent=gene-LDO50_RS08440;Dbxref=GenBank:WP_014725429.1;Name=WP_014725429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547257.1;locus_tag=LDO50_RS08440;product=lysozyme inhibitor LprI family protein;protein_id=WP_014725429.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 11480 12826 . - . ID=gene-LDO50_RS08445;Name=LDO50_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08445;old_locus_tag=BVI1335_1590013 NZ_CAJZAO010000067.1 Protein Homology CDS 11480 12826 . - 0 ID=cds-WP_224019610.1;Parent=gene-LDO50_RS08445;Dbxref=GenBank:WP_224019610.1;Name=WP_224019610.1;Ontology_term=GO:0006542,GO:0004356,GO:0005524,GO:0046872;gbkey=CDS;go_function=glutamine synthetase activity|0004356||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216584.1;locus_tag=LDO50_RS08445;product=glutamine synthetase family protein;protein_id=WP_224019610.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 12968 13525 . - . ID=gene-LDO50_RS08450;Name=LDO50_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08450;old_locus_tag=BVI1335_1590014 NZ_CAJZAO010000067.1 Protein Homology CDS 12968 13525 . - 0 ID=cds-WP_034194540.1;Parent=gene-LDO50_RS08450;Dbxref=GenBank:WP_034194540.1;Name=WP_034194540.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659265.1;locus_tag=LDO50_RS08450;product=helix-turn-helix domain-containing protein;protein_id=WP_034194540.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 13542 14831 . - . ID=gene-LDO50_RS08455;Name=LDO50_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08455;old_locus_tag=BVI1335_1590015 NZ_CAJZAO010000067.1 Protein Homology CDS 13542 14831 . - 0 ID=cds-WP_045577798.1;Parent=gene-LDO50_RS08455;Dbxref=GenBank:WP_045577798.1;Name=WP_045577798.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751385.1;locus_tag=LDO50_RS08455;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_045577798.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 16162 17565 . + . ID=gene-LDO50_RS08465;Name=LDO50_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08465;old_locus_tag=BVI1335_1590018 NZ_CAJZAO010000067.1 Protein Homology CDS 16162 17565 . + 0 ID=cds-WP_011882644.1;Parent=gene-LDO50_RS08465;Dbxref=GenBank:WP_011882644.1;Name=WP_011882644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882644.1;locus_tag=LDO50_RS08465;product=sensor histidine kinase;protein_id=WP_011882644.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 17623 18120 . - . ID=gene-LDO50_RS08470;Name=LDO50_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08470;old_locus_tag=BVI1335_1590019 NZ_CAJZAO010000067.1 Protein Homology CDS 17623 18120 . - 0 ID=cds-WP_011882645.1;Parent=gene-LDO50_RS08470;Dbxref=GenBank:WP_011882645.1;Name=WP_011882645.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882645.1;locus_tag=LDO50_RS08470;product=acyl-CoA thioesterase;protein_id=WP_011882645.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 18345 19331 . + . ID=gene-LDO50_RS08475;Name=LDO50_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08475;old_locus_tag=BVI1335_1590021 NZ_CAJZAO010000067.1 Protein Homology CDS 18345 19331 . + 0 ID=cds-WP_011882646.1;Parent=gene-LDO50_RS08475;Dbxref=GenBank:WP_011882646.1;Name=WP_011882646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882646.1;locus_tag=LDO50_RS08475;product=response regulator;protein_id=WP_011882646.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 19684 20550 . - . ID=gene-LDO50_RS08480;Name=LDO50_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08480;old_locus_tag=BVI1335_1590023 NZ_CAJZAO010000067.1 Protein Homology CDS 19684 20550 . - 0 ID=cds-WP_224019612.1;Parent=gene-LDO50_RS08480;Dbxref=GenBank:WP_224019612.1;Name=WP_224019612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882647.1;locus_tag=LDO50_RS08480;product=alpha/beta fold hydrolase;protein_id=WP_224019612.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 20565 21818 . - . ID=gene-LDO50_RS08485;Name=mhpT;gbkey=Gene;gene=mhpT;gene_biotype=protein_coding;locus_tag=LDO50_RS08485;old_locus_tag=BVI1335_1590024 NZ_CAJZAO010000067.1 Protein Homology CDS 20565 21818 . - 0 ID=cds-WP_011882648.1;Parent=gene-LDO50_RS08485;Dbxref=GenBank:WP_011882648.1;Name=WP_011882648.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mhpT;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882648.1;locus_tag=LDO50_RS08485;product=3-(3-hydroxy-phenyl)propionate transporter MhpT;protein_id=WP_011882648.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 21877 22899 . - . ID=gene-LDO50_RS08490;Name=dmpG;gbkey=Gene;gene=dmpG;gene_biotype=protein_coding;locus_tag=LDO50_RS08490;old_locus_tag=BVI1335_1590025 NZ_CAJZAO010000067.1 Protein Homology CDS 21877 22899 . - 0 ID=cds-WP_330987172.1;Parent=gene-LDO50_RS08490;Dbxref=GenBank:WP_330987172.1;Name=WP_330987172.1;Ontology_term=GO:0009056,GO:0008701;gbkey=CDS;gene=dmpG;go_function=4-hydroxy-2-oxovalerate aldolase activity|0008701||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882649.1;locus_tag=LDO50_RS08490;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_330987172.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 22915 23862 . - . ID=gene-LDO50_RS08495;Name=LDO50_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08495;old_locus_tag=BVI1335_1590026 NZ_CAJZAO010000067.1 Protein Homology CDS 22915 23862 . - 0 ID=cds-WP_011882650.1;Parent=gene-LDO50_RS08495;Dbxref=GenBank:WP_011882650.1;Name=WP_011882650.1;Ontology_term=GO:0009056,GO:0008774;gbkey=CDS;go_function=acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882650.1;locus_tag=LDO50_RS08495;product=acetaldehyde dehydrogenase (acetylating);protein_id=WP_011882650.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 23880 24668 . - . ID=gene-LDO50_RS08500;Name=mhpD;gbkey=Gene;gene=mhpD;gene_biotype=protein_coding;locus_tag=LDO50_RS08500;old_locus_tag=BVI1335_1590027 NZ_CAJZAO010000067.1 Protein Homology CDS 23880 24668 . - 0 ID=cds-WP_059456001.1;Parent=gene-LDO50_RS08500;Dbxref=GenBank:WP_059456001.1;Name=WP_059456001.1;Ontology_term=GO:0009056,GO:0008684,GO:0030145;gbkey=CDS;gene=mhpD;go_function=2-oxopent-4-enoate hydratase activity|0008684||IEA,manganese ion binding|0030145||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725435.1;locus_tag=LDO50_RS08500;product=2-keto-4-pentenoate hydratase;protein_id=WP_059456001.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 24673 25626 . - . ID=gene-LDO50_RS08505;Name=LDO50_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08505;old_locus_tag=BVI1335_1590028 NZ_CAJZAO010000067.1 Protein Homology CDS 24673 25626 . - 0 ID=cds-WP_059562563.1;Parent=gene-LDO50_RS08505;Dbxref=GenBank:WP_059562563.1;Name=WP_059562563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725436.1;locus_tag=LDO50_RS08505;product=3-carboxyethylcatechol 2%2C3-dioxygenase;protein_id=WP_059562563.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 25628 27475 . - . ID=gene-LDO50_RS08510;Name=LDO50_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08510;old_locus_tag=BVI1335_1590029 NZ_CAJZAO010000067.1 Protein Homology CDS 25628 27475 . - 0 ID=cds-WP_046423709.1;Parent=gene-LDO50_RS08510;Dbxref=GenBank:WP_046423709.1;Name=WP_046423709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882653.1;locus_tag=LDO50_RS08510;product=bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;protein_id=WP_046423709.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 27640 28452 . + . ID=gene-LDO50_RS08515;Name=LDO50_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08515;old_locus_tag=BVI1335_1590030 NZ_CAJZAO010000067.1 Protein Homology CDS 27640 28452 . + 0 ID=cds-WP_034194532.1;Parent=gene-LDO50_RS08515;Dbxref=GenBank:WP_034194532.1;Name=WP_034194532.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882654.1;locus_tag=LDO50_RS08515;product=DNA-binding transcriptional regulator;protein_id=WP_034194532.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 28726 29964 . - . ID=gene-LDO50_RS08520;Name=LDO50_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08520;old_locus_tag=BVI1335_1590031 NZ_CAJZAO010000067.1 Protein Homology CDS 28726 29964 . - 0 ID=cds-WP_011882655.1;Parent=gene-LDO50_RS08520;Dbxref=GenBank:WP_011882655.1;Name=WP_011882655.1;Ontology_term=GO:0006790,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412816.1;locus_tag=LDO50_RS08520;product=SfnB family sulfur acquisition oxidoreductase;protein_id=WP_011882655.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 30252 31511 . + . ID=gene-LDO50_RS08525;Name=LDO50_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08525;old_locus_tag=BVI1335_1590033 NZ_CAJZAO010000067.1 Protein Homology CDS 30252 31511 . + 0 ID=cds-WP_224019613.1;Parent=gene-LDO50_RS08525;Dbxref=GenBank:WP_224019613.1;Name=WP_224019613.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882656.1;locus_tag=LDO50_RS08525;product=acyl-CoA dehydrogenase family protein;protein_id=WP_224019613.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 31508 32908 . + . ID=gene-LDO50_RS08530;Name=LDO50_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08530;old_locus_tag=BVI1335_1590034 NZ_CAJZAO010000067.1 Protein Homology CDS 31508 32908 . + 0 ID=cds-WP_059739489.1;Parent=gene-LDO50_RS08530;Dbxref=GenBank:WP_059739489.1;Name=WP_059739489.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549909.1;locus_tag=LDO50_RS08530;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_059739489.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 33023 34450 . - . ID=gene-LDO50_RS08535;Name=LDO50_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08535;old_locus_tag=BVI1335_1590035 NZ_CAJZAO010000067.1 Protein Homology CDS 33023 34450 . - 0 ID=cds-WP_034194530.1;Parent=gene-LDO50_RS08535;Dbxref=GenBank:WP_034194530.1;Name=WP_034194530.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882658.1;locus_tag=LDO50_RS08535;product=MFS transporter;protein_id=WP_034194530.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 34787 35641 . - . ID=gene-LDO50_RS08540;Name=LDO50_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08540;old_locus_tag=BVI1335_1590036 NZ_CAJZAO010000067.1 Protein Homology CDS 34787 35641 . - 0 ID=cds-WP_051974452.1;Parent=gene-LDO50_RS08540;Dbxref=GenBank:WP_051974452.1;Name=WP_051974452.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012404207.1;locus_tag=LDO50_RS08540;product=HpcH/HpaI aldolase/citrate lyase family protein;protein_id=WP_051974452.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 35731 37080 . - . ID=gene-LDO50_RS08545;Name=LDO50_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08545;old_locus_tag=BVI1335_1590037 NZ_CAJZAO010000067.1 Protein Homology CDS 35731 37080 . - 0 ID=cds-WP_224019614.1;Parent=gene-LDO50_RS08545;Dbxref=GenBank:WP_224019614.1;Name=WP_224019614.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882660.1;locus_tag=LDO50_RS08545;product=MFS transporter;protein_id=WP_224019614.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 37129 37968 . - . ID=gene-LDO50_RS08550;Name=LDO50_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08550;old_locus_tag=BVI1335_1590038 NZ_CAJZAO010000067.1 Protein Homology CDS 37129 37968 . - 0 ID=cds-WP_059562579.1;Parent=gene-LDO50_RS08550;Dbxref=GenBank:WP_059562579.1;Name=WP_059562579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882661.1;locus_tag=LDO50_RS08550;product=FAS1-like dehydratase domain-containing protein;protein_id=WP_059562579.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 37965 39137 . - . ID=gene-LDO50_RS08555;Name=LDO50_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08555;old_locus_tag=BVI1335_1590039 NZ_CAJZAO010000067.1 Protein Homology CDS 37965 39137 . - 0 ID=cds-WP_045577788.1;Parent=gene-LDO50_RS08555;Dbxref=GenBank:WP_045577788.1;Name=WP_045577788.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882662.1;locus_tag=LDO50_RS08555;product=CaiB/BaiF CoA transferase family protein;protein_id=WP_045577788.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 39336 40214 . + . ID=gene-LDO50_RS08560;Name=LDO50_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08560;old_locus_tag=BVI1335_1590041 NZ_CAJZAO010000067.1 Protein Homology CDS 39336 40214 . + 0 ID=cds-WP_224019615.1;Parent=gene-LDO50_RS08560;Dbxref=GenBank:WP_224019615.1;Name=WP_224019615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882663.1;locus_tag=LDO50_RS08560;product=LysR family transcriptional regulator;protein_id=WP_224019615.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 40240 41400 . - . ID=gene-LDO50_RS08565;Name=LDO50_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08565;old_locus_tag=BVI1335_1590042 NZ_CAJZAO010000067.1 Protein Homology CDS 40240 41400 . - 0 ID=cds-WP_059621749.1;Parent=gene-LDO50_RS08565;Dbxref=GenBank:WP_059621749.1;Name=WP_059621749.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882664.1;locus_tag=LDO50_RS08565;product=GGDEF domain-containing protein;protein_id=WP_059621749.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq pseudogene 41912 42022 . - . ID=gene-LDO50_RS08575;Name=LDO50_RS08575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS08575;old_locus_tag=BVI1335_1590045;partial=true;pseudo=true;start_range=.,41912 NZ_CAJZAO010000067.1 Protein Homology CDS 41912 42022 . - 0 ID=cds-LDO50_RS08575;Parent=gene-LDO50_RS08575;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660160.1;locus_tag=LDO50_RS08575;partial=true;product=antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein;pseudo=true;start_range=.,41912;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 42265 42492 . - . ID=gene-LDO50_RS31410;Name=LDO50_RS31410;end_range=42492,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31410;old_locus_tag=BVI1335_1590046;partial=true NZ_CAJZAO010000067.1 Protein Homology CDS 42265 42492 . - 0 ID=cds-WP_443797751.1;Parent=gene-LDO50_RS31410;Dbxref=GenBank:WP_443797751.1;Name=WP_443797751.1;Ontology_term=GO:0055085,GO:0015562;end_range=42492,.;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011204905.1;locus_tag=LDO50_RS31410;partial=true;product=TolC family protein;protein_id=WP_443797751.1;transl_table=11 NZ_CAJZAO010000067.1 RefSeq gene 42503 43014 . - . ID=gene-LDO50_RS31415;Name=LDO50_RS31415;end_range=43014,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31415;old_locus_tag=BVI1335_1590047;partial=true;start_range=.,42503 NZ_CAJZAO010000067.1 Protein Homology CDS 42503 43014 . - 0 ID=cds-WP_443797752.1;Parent=gene-LDO50_RS31415;Dbxref=GenBank:WP_443797752.1;Name=WP_443797752.1;Ontology_term=GO:0055085,GO:0015562;end_range=43014,.;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011204905.1;locus_tag=LDO50_RS31415;partial=true;product=TolC family protein;protein_id=WP_443797752.1;start_range=.,42503;transl_table=11 ##sequence-region NZ_CAJZAO010000068.1 1 2724 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000068.1 RefSeq region 1 2724 . + . ID=NZ_CAJZAO010000068.1:1..2724;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_16 NZ_CAJZAO010000068.1 RefSeq gene 70 426 . + . ID=gene-LDO50_RS08585;Name=LDO50_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08585;old_locus_tag=BVI1335_160002 NZ_CAJZAO010000068.1 Protein Homology CDS 70 426 . + 0 ID=cds-WP_224019616.1;Parent=gene-LDO50_RS08585;Dbxref=GenBank:WP_224019616.1;Name=WP_224019616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754300.1;locus_tag=LDO50_RS08585;product=DUF3175 domain-containing protein;protein_id=WP_224019616.1;transl_table=11 NZ_CAJZAO010000068.1 RefSeq gene 465 1787 . + . ID=gene-LDO50_RS08590;Name=LDO50_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08590;old_locus_tag=BVI1335_160003 NZ_CAJZAO010000068.1 Protein Homology CDS 465 1787 . + 0 ID=cds-WP_059459641.1;Parent=gene-LDO50_RS08590;Dbxref=GenBank:WP_059459641.1;Name=WP_059459641.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336622.1;locus_tag=LDO50_RS08590;product=cation:proton antiporter;protein_id=WP_059459641.1;transl_table=11 NZ_CAJZAO010000068.1 RefSeq gene 1793 2724 . - . ID=gene-LDO50_RS08595;Name=ligD;end_range=2724,.;gbkey=Gene;gene=ligD;gene_biotype=protein_coding;locus_tag=LDO50_RS08595;old_locus_tag=BVI1335_160004;partial=true NZ_CAJZAO010000068.1 Protein Homology CDS 1793 2724 . - 2 ID=cds-WP_224019617.1;Parent=gene-LDO50_RS08595;Dbxref=GenBank:WP_224019617.1;Name=WP_224019617.1;end_range=2724,.;gbkey=CDS;gene=ligD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879881.1;locus_tag=LDO50_RS08595;partial=true;product=non-homologous end-joining DNA ligase;protein_id=WP_224019617.1;transl_table=11 ##sequence-region NZ_CAJZAO010000069.1 1 15374 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000069.1 RefSeq region 1 15374 . + . ID=NZ_CAJZAO010000069.1:1..15374;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_160 NZ_CAJZAO010000069.1 RefSeq gene 1 1011 . + . ID=gene-LDO50_RS08600;Name=LDO50_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08600;old_locus_tag=BVI1335_1600001;partial=true;start_range=.,1 NZ_CAJZAO010000069.1 Protein Homology CDS 1 1011 . + 0 ID=cds-WP_224019618.1;Parent=gene-LDO50_RS08600;Dbxref=GenBank:WP_224019618.1;Name=WP_224019618.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661428.1;locus_tag=LDO50_RS08600;partial=true;product=HlyD family secretion protein;protein_id=WP_224019618.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000069.1 RefSeq gene 1097 2689 . + . ID=gene-LDO50_RS08605;Name=LDO50_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08605;old_locus_tag=BVI1335_1600002 NZ_CAJZAO010000069.1 Protein Homology CDS 1097 2689 . + 0 ID=cds-WP_224019619.1;Parent=gene-LDO50_RS08605;Dbxref=GenBank:WP_224019619.1;Name=WP_224019619.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661427.1;locus_tag=LDO50_RS08605;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_224019619.1;transl_table=11 NZ_CAJZAO010000069.1 RefSeq pseudogene 2740 4323 . + . ID=gene-LDO50_RS08610;Name=LDO50_RS08610;end_range=4323,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS08610;old_locus_tag=BVI1335_1600003;partial=true;pseudo=true NZ_CAJZAO010000069.1 Protein Homology CDS 2740 4323 . + 0 ID=cds-LDO50_RS08610;Parent=gene-LDO50_RS08610;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006810,GO:0015288,GO:0009279;end_range=4323,.;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405158.1;locus_tag=LDO50_RS08610;partial=true;product=efflux transporter outer membrane subunit;pseudo=true;transl_table=11 NZ_CAJZAO010000069.1 RefSeq gene 4251 4550 . + . ID=gene-LDO50_RS31055;Name=LDO50_RS31055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31055 NZ_CAJZAO010000069.1 Protein Homology CDS 4251 4550 . + 0 ID=cds-WP_372586082.1;Parent=gene-LDO50_RS31055;Dbxref=GenBank:WP_372586082.1;Name=WP_372586082.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF038108.1;locus_tag=LDO50_RS31055;product=Cys-every-fifth RiPP peptide CefA;protein_id=WP_372586082.1;transl_table=11 NZ_CAJZAO010000069.1 RefSeq gene 4649 5203 . - . ID=gene-LDO50_RS08620;Name=LDO50_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08620;old_locus_tag=BVI1335_1600004 NZ_CAJZAO010000069.1 Protein Homology CDS 4649 5203 . - 0 ID=cds-WP_224019620.1;Parent=gene-LDO50_RS08620;Dbxref=GenBank:WP_224019620.1;Name=WP_224019620.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372589.1;locus_tag=LDO50_RS08620;product=GNAT family N-acetyltransferase;protein_id=WP_224019620.1;transl_table=11 NZ_CAJZAO010000069.1 RefSeq gene 5603 5827 . - . ID=gene-LDO50_RS08625;Name=LDO50_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08625;old_locus_tag=BVI1335_1600006 NZ_CAJZAO010000069.1 Protein Homology CDS 5603 5827 . - 0 ID=cds-WP_011880010.1;Parent=gene-LDO50_RS08625;Dbxref=GenBank:WP_011880010.1;Name=WP_011880010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336703.1;locus_tag=LDO50_RS08625;product=hypothetical protein;protein_id=WP_011880010.1;transl_table=11 NZ_CAJZAO010000069.1 RefSeq gene 5892 6155 . - . ID=gene-LDO50_RS08630;Name=LDO50_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08630;old_locus_tag=BVI1335_1600007 NZ_CAJZAO010000069.1 Protein Homology CDS 5892 6155 . - 0 ID=cds-WP_059603679.1;Parent=gene-LDO50_RS08630;Dbxref=GenBank:WP_059603679.1;Name=WP_059603679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761327.1;locus_tag=LDO50_RS08630;product=HPr family phosphocarrier protein;protein_id=WP_059603679.1;transl_table=11 NZ_CAJZAO010000069.1 RefSeq gene 6519 6863 . + . ID=gene-LDO50_RS08635;Name=LDO50_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08635;old_locus_tag=BVI1335_1600009 NZ_CAJZAO010000069.1 Protein Homology CDS 6519 6863 . + 0 ID=cds-WP_014725746.1;Parent=gene-LDO50_RS08635;Dbxref=GenBank:WP_014725746.1;Name=WP_014725746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893416.1;locus_tag=LDO50_RS08635;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_014725746.1;transl_table=11 NZ_CAJZAO010000069.1 RefSeq gene 6906 7742 . + . ID=gene-LDO50_RS08640;Name=LDO50_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08640;old_locus_tag=BVI1335_1600010 NZ_CAJZAO010000069.1 Protein Homology CDS 6906 7742 . + 0 ID=cds-WP_059701324.1;Parent=gene-LDO50_RS08640;Dbxref=GenBank:WP_059701324.1;Name=WP_059701324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752902.1;locus_tag=LDO50_RS08640;product=hypothetical protein;protein_id=WP_059701324.1;transl_table=11 NZ_CAJZAO010000069.1 RefSeq gene 7791 7979 . - . ID=gene-LDO50_RS08645;Name=LDO50_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08645;old_locus_tag=BVI1335_1600011 NZ_CAJZAO010000069.1 Protein Homology CDS 7791 7979 . - 0 ID=cds-WP_011880014.1;Parent=gene-LDO50_RS08645;Dbxref=GenBank:WP_011880014.1;Name=WP_011880014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880014.1;locus_tag=LDO50_RS08645;product=CopG family transcriptional regulator;protein_id=WP_011880014.1;transl_table=11 NZ_CAJZAO010000069.1 RefSeq gene 8053 8811 . - . ID=gene-LDO50_RS08650;Name=LDO50_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08650;old_locus_tag=BVI1335_1600012 NZ_CAJZAO010000069.1 Protein Homology CDS 8053 8811 . - 0 ID=cds-WP_011880015.1;Parent=gene-LDO50_RS08650;Dbxref=GenBank:WP_011880015.1;Name=WP_011880015.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661419.1;locus_tag=LDO50_RS08650;product=YoaK family protein;protein_id=WP_011880015.1;transl_table=11 NZ_CAJZAO010000069.1 RefSeq gene 9113 9463 . + . ID=gene-LDO50_RS08655;Name=LDO50_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08655;old_locus_tag=BVI1335_1600013 NZ_CAJZAO010000069.1 Protein Homology CDS 9113 9463 . + 0 ID=cds-WP_059454569.1;Parent=gene-LDO50_RS08655;Dbxref=GenBank:WP_059454569.1;Name=WP_059454569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752899.1;locus_tag=LDO50_RS08655;product=hypothetical protein;protein_id=WP_059454569.1;transl_table=11 NZ_CAJZAO010000069.1 RefSeq gene 9460 9672 . + . ID=gene-LDO50_RS08660;Name=LDO50_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08660;old_locus_tag=BVI1335_1600014 NZ_CAJZAO010000069.1 Protein Homology CDS 9460 9672 . + 0 ID=cds-WP_011880017.1;Parent=gene-LDO50_RS08660;Dbxref=GenBank:WP_011880017.1;Name=WP_011880017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489184.1;locus_tag=LDO50_RS08660;product=twin transmembrane helix small protein;protein_id=WP_011880017.1;transl_table=11 NZ_CAJZAO010000069.1 RefSeq gene 9878 11182 . - . ID=gene-LDO50_RS08665;Name=LDO50_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08665;old_locus_tag=BVI1335_1600015 NZ_CAJZAO010000069.1 Protein Homology CDS 9878 11182 . - 0 ID=cds-WP_224019621.1;Parent=gene-LDO50_RS08665;Dbxref=GenBank:WP_224019621.1;Name=WP_224019621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489158.1;locus_tag=LDO50_RS08665;product=HipA domain-containing protein;protein_id=WP_224019621.1;transl_table=11 NZ_CAJZAO010000069.1 RefSeq gene 11172 11456 . - . ID=gene-LDO50_RS08670;Name=LDO50_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08670;old_locus_tag=BVI1335_1600016 NZ_CAJZAO010000069.1 Protein Homology CDS 11172 11456 . - 0 ID=cds-WP_011880019.1;Parent=gene-LDO50_RS08670;Dbxref=GenBank:WP_011880019.1;Name=WP_011880019.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880019.1;locus_tag=LDO50_RS08670;product=helix-turn-helix domain-containing protein;protein_id=WP_011880019.1;transl_table=11 NZ_CAJZAO010000069.1 RefSeq gene 11783 13162 . - . ID=gene-LDO50_RS08675;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=LDO50_RS08675;old_locus_tag=BVI1335_1600017 NZ_CAJZAO010000069.1 Protein Homology CDS 11783 13162 . - 0 ID=cds-WP_308117485.1;Parent=gene-LDO50_RS08675;Dbxref=GenBank:WP_308117485.1;Name=WP_308117485.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880020.1;locus_tag=LDO50_RS08675;product=NO-inducible flavohemoprotein;protein_id=WP_308117485.1;transl_table=11 NZ_CAJZAO010000069.1 RefSeq gene 13192 13902 . + . ID=gene-LDO50_RS08680;Name=LDO50_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08680;old_locus_tag=BVI1335_1600018 NZ_CAJZAO010000069.1 Protein Homology CDS 13192 13902 . + 0 ID=cds-WP_059454572.1;Parent=gene-LDO50_RS08680;Dbxref=GenBank:WP_059454572.1;Name=WP_059454572.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661407.1;locus_tag=LDO50_RS08680;product=MgtC/SapB family protein;protein_id=WP_059454572.1;transl_table=11 NZ_CAJZAO010000069.1 RefSeq gene 13967 14392 . + . ID=gene-LDO50_RS08685;Name=LDO50_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08685;old_locus_tag=BVI1335_1600019 NZ_CAJZAO010000069.1 Protein Homology CDS 13967 14392 . + 0 ID=cds-WP_011880022.1;Parent=gene-LDO50_RS08685;Dbxref=GenBank:WP_011880022.1;Name=WP_011880022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481271.1;locus_tag=LDO50_RS08685;product=CBS domain-containing protein;protein_id=WP_011880022.1;transl_table=11 NZ_CAJZAO010000069.1 RefSeq gene 14420 14689 . + . ID=gene-LDO50_RS08690;Name=LDO50_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08690;old_locus_tag=BVI1335_1600020 NZ_CAJZAO010000069.1 Protein Homology CDS 14420 14689 . + 0 ID=cds-WP_059457459.1;Parent=gene-LDO50_RS08690;Dbxref=GenBank:WP_059457459.1;Name=WP_059457459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725753.1;locus_tag=LDO50_RS08690;product=DUF2934 domain-containing protein;protein_id=WP_059457459.1;transl_table=11 NZ_CAJZAO010000069.1 RefSeq gene 14896 15033 . - . ID=gene-LDO50_RS08695;Name=LDO50_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08695;old_locus_tag=BVI1335_1600021 NZ_CAJZAO010000069.1 Protein Homology CDS 14896 15033 . - 0 ID=cds-WP_196773663.1;Parent=gene-LDO50_RS08695;Dbxref=GenBank:WP_196773663.1;Name=WP_196773663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399014.1;locus_tag=LDO50_RS08695;product=hypothetical protein;protein_id=WP_196773663.1;transl_table=11 NZ_CAJZAO010000069.1 RefSeq gene 15106 15374 . - . ID=gene-LDO50_RS08700;Name=LDO50_RS08700;end_range=15374,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08700;old_locus_tag=BVI1335_1600022;partial=true NZ_CAJZAO010000069.1 Protein Homology CDS 15106 15374 . - 2 ID=cds-WP_224019622.1;Parent=gene-LDO50_RS08700;Dbxref=GenBank:WP_224019622.1;Name=WP_224019622.1;Ontology_term=GO:0000160;end_range=15374,.;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372574.1;locus_tag=LDO50_RS08700;partial=true;product=response regulator;protein_id=WP_224019622.1;transl_table=11 ##sequence-region NZ_CAJZAO010000070.1 1 5682 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000070.1 RefSeq region 1 5682 . + . ID=NZ_CAJZAO010000070.1:1..5682;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_161 NZ_CAJZAO010000070.1 RefSeq pseudogene 1 191 . - . ID=gene-LDO50_RS31420;Name=LDO50_RS31420;end_range=191,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31420;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000070.1 Protein Homology CDS 1 191 . - 2 ID=cds-LDO50_RS31420;Parent=gene-LDO50_RS31420;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=191,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883046.1;locus_tag=LDO50_RS31420;partial=true;product=MlaA family lipoprotein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000070.1 RefSeq gene 202 696 . - . ID=gene-LDO50_RS08705;Name=LDO50_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08705;old_locus_tag=BVI1335_1610002;partial=true;start_range=.,202 NZ_CAJZAO010000070.1 Protein Homology CDS 202 696 . - 0 ID=cds-WP_443797753.1;Parent=gene-LDO50_RS08705;Dbxref=GenBank:WP_443797753.1;Name=WP_443797753.1;Ontology_term=GO:0120010,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=intermembrane phospholipid transfer|0120010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883046.1;locus_tag=LDO50_RS08705;partial=true;product=MlaA family lipoprotein;protein_id=WP_443797753.1;start_range=.,202;transl_table=11 NZ_CAJZAO010000070.1 RefSeq gene 729 1295 . - . ID=gene-LDO50_RS08710;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=LDO50_RS08710;old_locus_tag=BVI1335_1610003 NZ_CAJZAO010000070.1 Protein Homology CDS 729 1295 . - 0 ID=cds-WP_034193998.1;Parent=gene-LDO50_RS08710;Dbxref=GenBank:WP_034193998.1;Name=WP_034193998.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400593.1;locus_tag=LDO50_RS08710;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_034193998.1;transl_table=11 NZ_CAJZAO010000070.1 RefSeq gene 1320 2087 . - . ID=gene-LDO50_RS08715;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=LDO50_RS08715;old_locus_tag=BVI1335_1610004 NZ_CAJZAO010000070.1 Protein Homology CDS 1320 2087 . - 0 ID=cds-WP_011883044.1;Parent=gene-LDO50_RS08715;Dbxref=GenBank:WP_011883044.1;Name=WP_011883044.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734415.1;locus_tag=LDO50_RS08715;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_011883044.1;transl_table=11 NZ_CAJZAO010000070.1 RefSeq gene 2084 2905 . - . ID=gene-LDO50_RS08720;Name=LDO50_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08720;old_locus_tag=BVI1335_1610005 NZ_CAJZAO010000070.1 Protein Homology CDS 2084 2905 . - 0 ID=cds-WP_011883043.1;Parent=gene-LDO50_RS08720;Dbxref=GenBank:WP_011883043.1;Name=WP_011883043.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333587.1;locus_tag=LDO50_RS08720;product=ABC transporter ATP-binding protein;protein_id=WP_011883043.1;transl_table=11 NZ_CAJZAO010000070.1 RefSeq gene 2990 4114 . - . ID=gene-LDO50_RS08725;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=LDO50_RS08725;old_locus_tag=BVI1335_1610006 NZ_CAJZAO010000070.1 Protein Homology CDS 2990 4114 . - 0 ID=cds-WP_034193999.1;Parent=gene-LDO50_RS08725;Dbxref=GenBank:WP_034193999.1;Name=WP_034193999.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492304.1;locus_tag=LDO50_RS08725;product=thiamine phosphate synthase;protein_id=WP_034193999.1;transl_table=11 NZ_CAJZAO010000070.1 RefSeq gene 4111 4926 . - . ID=gene-LDO50_RS08730;Name=LDO50_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08730;old_locus_tag=BVI1335_1610007 NZ_CAJZAO010000070.1 Protein Homology CDS 4111 4926 . - 0 ID=cds-WP_224019625.1;Parent=gene-LDO50_RS08730;Dbxref=GenBank:WP_224019625.1;Name=WP_224019625.1;Ontology_term=GO:1990107;gbkey=CDS;go_function=thiazole synthase activity|1990107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106891.1;locus_tag=LDO50_RS08730;product=thiazole synthase;protein_id=WP_224019625.1;transl_table=11 NZ_CAJZAO010000070.1 RefSeq gene 4965 5162 . - . ID=gene-LDO50_RS08735;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=LDO50_RS08735;old_locus_tag=BVI1335_1610008 NZ_CAJZAO010000070.1 Protein Homology CDS 4965 5162 . - 0 ID=cds-WP_011883040.1;Parent=gene-LDO50_RS08735;Dbxref=GenBank:WP_011883040.1;Name=WP_011883040.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009888501.1;locus_tag=LDO50_RS08735;product=sulfur carrier protein ThiS;protein_id=WP_011883040.1;transl_table=11 NZ_CAJZAO010000070.1 RefSeq gene 5195 5682 . - . ID=gene-LDO50_RS08740;Name=LDO50_RS08740;end_range=5682,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08740;old_locus_tag=BVI1335_1610009;partial=true NZ_CAJZAO010000070.1 Protein Homology CDS 5195 5682 . - 2 ID=cds-WP_224019626.1;Parent=gene-LDO50_RS08740;Dbxref=GenBank:WP_224019626.1;Name=WP_224019626.1;Ontology_term=GO:0016491;end_range=5682,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400599.1;locus_tag=LDO50_RS08740;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_224019626.1;transl_table=11 ##sequence-region NZ_CAJZAO010000071.1 1 83439 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000071.1 RefSeq region 1 83439 . + . ID=NZ_CAJZAO010000071.1:1..83439;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_162 NZ_CAJZAO010000071.1 RefSeq gene 755 1987 . + . ID=gene-LDO50_RS08745;Name=LDO50_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08745;old_locus_tag=BVI1335_1620003 NZ_CAJZAO010000071.1 Protein Homology CDS 755 1987 . + 0 ID=cds-WP_011884023.1;Parent=gene-LDO50_RS08745;Dbxref=GenBank:WP_011884023.1;Name=WP_011884023.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755011.1;locus_tag=LDO50_RS08745;product=aspartate aminotransferase family protein;protein_id=WP_011884023.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 2018 3094 . + . ID=gene-LDO50_RS08750;Name=aruF;gbkey=Gene;gene=aruF;gene_biotype=protein_coding;locus_tag=LDO50_RS08750;old_locus_tag=BVI1335_1620004 NZ_CAJZAO010000071.1 Protein Homology CDS 2018 3094 . + 0 ID=cds-WP_046422471.1;Parent=gene-LDO50_RS08750;Dbxref=GenBank:WP_046422471.1;Name=WP_046422471.1;gbkey=CDS;gene=aruF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524646.1;locus_tag=LDO50_RS08750;product=arginine/ornithine succinyltransferase subunit alpha;protein_id=WP_046422471.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 3091 4122 . + . ID=gene-LDO50_RS08755;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=LDO50_RS08755;old_locus_tag=BVI1335_1620005 NZ_CAJZAO010000071.1 Protein Homology CDS 3091 4122 . + 0 ID=cds-WP_011884025.1;Parent=gene-LDO50_RS08755;Dbxref=GenBank:WP_011884025.1;Name=WP_011884025.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009931289.1;locus_tag=LDO50_RS08755;product=arginine N-succinyltransferase;protein_id=WP_011884025.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 4130 5593 . + . ID=gene-LDO50_RS08760;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=LDO50_RS08760;old_locus_tag=BVI1335_1620006 NZ_CAJZAO010000071.1 Protein Homology CDS 4130 5593 . + 0 ID=cds-WP_014722756.1;Parent=gene-LDO50_RS08760;Dbxref=GenBank:WP_014722756.1;Name=WP_014722756.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656401.1;locus_tag=LDO50_RS08760;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_014722756.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 5608 6948 . + . ID=gene-LDO50_RS08765;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=LDO50_RS08765;old_locus_tag=BVI1335_1620007 NZ_CAJZAO010000071.1 Protein Homology CDS 5608 6948 . + 0 ID=cds-WP_224019627.1;Parent=gene-LDO50_RS08765;Dbxref=GenBank:WP_224019627.1;Name=WP_224019627.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025855.1;locus_tag=LDO50_RS08765;product=N-succinylarginine dihydrolase;protein_id=WP_224019627.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 6932 8017 . + . ID=gene-LDO50_RS08770;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=LDO50_RS08770;old_locus_tag=BVI1335_1620008 NZ_CAJZAO010000071.1 Protein Homology CDS 6932 8017 . + 0 ID=cds-WP_372586083.1;Parent=gene-LDO50_RS08770;Dbxref=GenBank:WP_372586083.1;Name=WP_372586083.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213758.1;locus_tag=LDO50_RS08770;product=succinylglutamate desuccinylase;protein_id=WP_372586083.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 8254 9048 . + . ID=gene-LDO50_RS08775;Name=LDO50_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08775;old_locus_tag=BVI1335_1620009 NZ_CAJZAO010000071.1 Protein Homology CDS 8254 9048 . + 0 ID=cds-WP_011884036.1;Parent=gene-LDO50_RS08775;Dbxref=GenBank:WP_011884036.1;Name=WP_011884036.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025859.1;locus_tag=LDO50_RS08775;product=ABC transporter substrate-binding protein;protein_id=WP_011884036.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 9136 10668 . - . ID=gene-LDO50_RS08780;Name=LDO50_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08780;old_locus_tag=BVI1335_1620010 NZ_CAJZAO010000071.1 Protein Homology CDS 9136 10668 . - 0 ID=cds-WP_011884038.1;Parent=gene-LDO50_RS08780;Dbxref=GenBank:WP_011884038.1;Name=WP_011884038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884038.1;locus_tag=LDO50_RS08780;product=HDOD domain-containing protein;protein_id=WP_011884038.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 10698 12437 . - . ID=gene-LDO50_RS08785;Name=cdpA;gbkey=Gene;gene=cdpA;gene_biotype=protein_coding;locus_tag=LDO50_RS08785;old_locus_tag=BVI1335_1620011 NZ_CAJZAO010000071.1 Protein Homology CDS 10698 12437 . - 0 ID=cds-WP_196480377.1;Parent=gene-LDO50_RS08785;Dbxref=GenBank:WP_196480377.1;Name=WP_196480377.1;gbkey=CDS;gene=cdpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544994.1;locus_tag=LDO50_RS08785;product=cyclic di-GMP phosphodiesterase CdpA;protein_id=WP_196480377.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 12717 13268 . + . ID=gene-LDO50_RS08790;Name=LDO50_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08790;old_locus_tag=BVI1335_1620012 NZ_CAJZAO010000071.1 Protein Homology CDS 12717 13268 . + 0 ID=cds-WP_011884041.1;Parent=gene-LDO50_RS08790;Dbxref=GenBank:WP_011884041.1;Name=WP_011884041.1;Ontology_term=GO:0008379,GO:0051920;gbkey=CDS;go_function=thioredoxin peroxidase activity|0008379||IEA,peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897592.1;locus_tag=LDO50_RS08790;product=peroxiredoxin;protein_id=WP_011884041.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 13473 14102 . - . ID=gene-LDO50_RS08795;Name=LDO50_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08795;old_locus_tag=BVI1335_1620013 NZ_CAJZAO010000071.1 Protein Homology CDS 13473 14102 . - 0 ID=cds-WP_014722761.1;Parent=gene-LDO50_RS08795;Dbxref=GenBank:WP_014722761.1;Name=WP_014722761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521880.1;locus_tag=LDO50_RS08795;product=SDR family oxidoreductase;protein_id=WP_014722761.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 14342 15865 . + . ID=gene-LDO50_RS08800;Name=LDO50_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08800;old_locus_tag=BVI1335_1620015 NZ_CAJZAO010000071.1 Protein Homology CDS 14342 15865 . + 0 ID=cds-WP_059735211.1;Parent=gene-LDO50_RS08800;Dbxref=GenBank:WP_059735211.1;Name=WP_059735211.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328187.1;locus_tag=LDO50_RS08800;product=NYN domain-containing protein;protein_id=WP_059735211.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 16191 19499 . - . ID=gene-LDO50_RS08805;Name=LDO50_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08805;old_locus_tag=BVI1335_1620016 NZ_CAJZAO010000071.1 Protein Homology CDS 16191 19499 . - 0 ID=cds-WP_224019628.1;Parent=gene-LDO50_RS08805;Dbxref=GenBank:WP_224019628.1;Name=WP_224019628.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897587.1;locus_tag=LDO50_RS08805;product=efflux RND transporter permease subunit;protein_id=WP_224019628.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 19503 22616 . - . ID=gene-LDO50_RS08810;Name=LDO50_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08810;old_locus_tag=BVI1335_1620017 NZ_CAJZAO010000071.1 Protein Homology CDS 19503 22616 . - 0 ID=cds-WP_011884049.1;Parent=gene-LDO50_RS08810;Dbxref=GenBank:WP_011884049.1;Name=WP_011884049.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401193.1;locus_tag=LDO50_RS08810;product=MdtB/MuxB family multidrug efflux RND transporter permease subunit;protein_id=WP_011884049.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 22632 23999 . - . ID=gene-LDO50_RS08815;Name=LDO50_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08815;old_locus_tag=BVI1335_1620018 NZ_CAJZAO010000071.1 Protein Homology CDS 22632 23999 . - 0 ID=cds-WP_041493950.1;Parent=gene-LDO50_RS08815;Dbxref=GenBank:WP_041493950.1;Name=WP_041493950.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694235.1;locus_tag=LDO50_RS08815;product=MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit;protein_id=WP_041493950.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 24288 25112 . - . ID=gene-LDO50_RS08820;Name=LDO50_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08820;old_locus_tag=BVI1335_1620019 NZ_CAJZAO010000071.1 Protein Homology CDS 24288 25112 . - 0 ID=cds-WP_011884053.1;Parent=gene-LDO50_RS08820;Dbxref=GenBank:WP_011884053.1;Name=WP_011884053.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884053.1;locus_tag=LDO50_RS08820;product=IclR family transcriptional regulator;protein_id=WP_011884053.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 25698 27653 . - . ID=gene-LDO50_RS08825;Name=LDO50_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08825;old_locus_tag=BVI1335_1620020 NZ_CAJZAO010000071.1 Protein Homology CDS 25698 27653 . - 0 ID=cds-WP_059888326.1;Parent=gene-LDO50_RS08825;Dbxref=GenBank:WP_059888326.1;Name=WP_059888326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199580.1;locus_tag=LDO50_RS08825;product=PhoX family protein;protein_id=WP_059888326.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 27847 29040 . - . ID=gene-LDO50_RS08830;Name=LDO50_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08830;old_locus_tag=BVI1335_1620021 NZ_CAJZAO010000071.1 Protein Homology CDS 27847 29040 . - 0 ID=cds-WP_011884058.1;Parent=gene-LDO50_RS08830;Dbxref=GenBank:WP_011884058.1;Name=WP_011884058.1;Ontology_term=GO:0072488,GO:0008519,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694238.1;locus_tag=LDO50_RS08830;product=ammonium transporter;protein_id=WP_011884058.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 29294 29629 . - . ID=gene-LDO50_RS08835;Name=LDO50_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08835;old_locus_tag=BVI1335_1620022 NZ_CAJZAO010000071.1 Protein Homology CDS 29294 29629 . - 0 ID=cds-WP_011884061.1;Parent=gene-LDO50_RS08835;Dbxref=GenBank:WP_011884061.1;Name=WP_011884061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545006.1;locus_tag=LDO50_RS08835;product=hypothetical protein;protein_id=WP_011884061.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 29821 30249 . + . ID=gene-LDO50_RS08840;Name=LDO50_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08840;old_locus_tag=BVI1335_1620023 NZ_CAJZAO010000071.1 Protein Homology CDS 29821 30249 . + 0 ID=cds-WP_011884063.1;Parent=gene-LDO50_RS08840;Dbxref=GenBank:WP_011884063.1;Name=WP_011884063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897553.1;locus_tag=LDO50_RS08840;product=hypothetical protein;protein_id=WP_011884063.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 30342 30782 . + . ID=gene-LDO50_RS08845;Name=LDO50_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08845;old_locus_tag=BVI1335_1620025 NZ_CAJZAO010000071.1 Protein Homology CDS 30342 30782 . + 0 ID=cds-WP_011884064.1;Parent=gene-LDO50_RS08845;Dbxref=GenBank:WP_011884064.1;Name=WP_011884064.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884064.1;locus_tag=LDO50_RS08845;product=Rrf2 family transcriptional regulator;protein_id=WP_011884064.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 30914 31555 . + . ID=gene-LDO50_RS08850;Name=LDO50_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08850;old_locus_tag=BVI1335_1620024 NZ_CAJZAO010000071.1 Protein Homology CDS 30914 31555 . + 0 ID=cds-WP_014722766.1;Parent=gene-LDO50_RS08850;Dbxref=GenBank:WP_014722766.1;Name=WP_014722766.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601647.1;locus_tag=LDO50_RS08850;product=NAD(P)-dependent oxidoreductase;protein_id=WP_014722766.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 31819 32289 . + . ID=gene-LDO50_RS08855;Name=LDO50_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08855;old_locus_tag=BVI1335_1620026 NZ_CAJZAO010000071.1 Protein Homology CDS 31819 32289 . + 0 ID=cds-WP_011884069.1;Parent=gene-LDO50_RS08855;Dbxref=GenBank:WP_011884069.1;Name=WP_011884069.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332862.1;locus_tag=LDO50_RS08855;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011884069.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 32480 32641 . + . ID=gene-LDO50_RS08860;Name=LDO50_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08860;old_locus_tag=BVI1335_1620027 NZ_CAJZAO010000071.1 Protein Homology CDS 32480 32641 . + 0 ID=cds-WP_011884072.1;Parent=gene-LDO50_RS08860;Dbxref=GenBank:WP_011884072.1;Name=WP_011884072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415664.1;locus_tag=LDO50_RS08860;product=hypothetical protein;protein_id=WP_011884072.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 32954 35245 . - . ID=gene-LDO50_RS08865;Name=LDO50_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08865;old_locus_tag=BVI1335_1620028 NZ_CAJZAO010000071.1 Protein Homology CDS 32954 35245 . - 0 ID=cds-WP_046422497.1;Parent=gene-LDO50_RS08865;Dbxref=GenBank:WP_046422497.1;Name=WP_046422497.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534567.1;locus_tag=LDO50_RS08865;product=FUSC family protein;protein_id=WP_046422497.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 35427 38765 . + . ID=gene-LDO50_RS08870;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=LDO50_RS08870;old_locus_tag=BVI1335_1620029 NZ_CAJZAO010000071.1 Protein Homology CDS 35427 38765 . + 0 ID=cds-WP_224019629.1;Parent=gene-LDO50_RS08870;Dbxref=GenBank:WP_224019629.1;Name=WP_224019629.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884075.1;locus_tag=LDO50_RS08870;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_224019629.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 38762 42466 . + . ID=gene-LDO50_RS08875;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=LDO50_RS08875;old_locus_tag=BVI1335_1620030 NZ_CAJZAO010000071.1 Protein Homology CDS 38762 42466 . + 0 ID=cds-WP_176300840.1;Parent=gene-LDO50_RS08875;Dbxref=GenBank:WP_176300840.1;Name=WP_176300840.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524,GO:0008854,GO:0009338;gbkey=CDS;gene=recB;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363476.1;locus_tag=LDO50_RS08875;product=exodeoxyribonuclease V subunit beta;protein_id=WP_176300840.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 42463 44814 . + . ID=gene-LDO50_RS08880;Name=LDO50_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08880;old_locus_tag=BVI1335_1620031 NZ_CAJZAO010000071.1 Protein Homology CDS 42463 44814 . + 0 ID=cds-WP_224019630.1;Parent=gene-LDO50_RS08880;Dbxref=GenBank:WP_224019630.1;Name=WP_224019630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722771.1;locus_tag=LDO50_RS08880;product=AAA family ATPase;protein_id=WP_224019630.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 44811 45215 . + . ID=gene-LDO50_RS08885;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=LDO50_RS08885;old_locus_tag=BVI1335_1620032 NZ_CAJZAO010000071.1 Protein Homology CDS 44811 45215 . + 0 ID=cds-WP_011884080.1;Parent=gene-LDO50_RS08885;Dbxref=GenBank:WP_011884080.1;Name=WP_011884080.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884080.1;locus_tag=LDO50_RS08885;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_011884080.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 45385 46677 . - . ID=gene-LDO50_RS08890;Name=LDO50_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08890;old_locus_tag=BVI1335_1620033 NZ_CAJZAO010000071.1 Protein Homology CDS 45385 46677 . - 0 ID=cds-WP_011884081.1;Parent=gene-LDO50_RS08890;Dbxref=GenBank:WP_011884081.1;Name=WP_011884081.1;Ontology_term=GO:0007165,GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351492.1;locus_tag=LDO50_RS08890;product=sensor domain-containing phosphodiesterase;protein_id=WP_011884081.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 46895 47821 . - . ID=gene-LDO50_RS08895;Name=LDO50_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08895;old_locus_tag=BVI1335_1620035 NZ_CAJZAO010000071.1 Protein Homology CDS 46895 47821 . - 0 ID=cds-WP_059455577.1;Parent=gene-LDO50_RS08895;Dbxref=GenBank:WP_059455577.1;Name=WP_059455577.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545018.1;locus_tag=LDO50_RS08895;product=DMT family transporter;protein_id=WP_059455577.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 47951 48199 . - . ID=gene-LDO50_RS08900;Name=LDO50_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08900;old_locus_tag=BVI1335_1620036 NZ_CAJZAO010000071.1 Protein Homology CDS 47951 48199 . - 0 ID=cds-WP_011884086.1;Parent=gene-LDO50_RS08900;Dbxref=GenBank:WP_011884086.1;Name=WP_011884086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363480.1;locus_tag=LDO50_RS08900;product=hypothetical protein;protein_id=WP_011884086.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 48411 48626 . - . ID=gene-LDO50_RS08905;Name=LDO50_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08905;old_locus_tag=BVI1335_1620038 NZ_CAJZAO010000071.1 Protein Homology CDS 48411 48626 . - 0 ID=cds-WP_034193216.1;Parent=gene-LDO50_RS08905;Dbxref=GenBank:WP_034193216.1;Name=WP_034193216.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545020.1;locus_tag=LDO50_RS08905;product=glycine zipper 2TM domain-containing protein;protein_id=WP_034193216.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 48894 50825 . - . ID=gene-LDO50_RS08910;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=LDO50_RS08910;old_locus_tag=BVI1335_1620039 NZ_CAJZAO010000071.1 Protein Homology CDS 48894 50825 . - 0 ID=cds-WP_011884090.1;Parent=gene-LDO50_RS08910;Dbxref=GenBank:WP_011884090.1;Name=WP_011884090.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697214.1;locus_tag=LDO50_RS08910;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_011884090.1;transl_table=11 NZ_CAJZAO010000071.1 cmsearch riboswitch 50950 51066 . - . ID=id-NZ_CAJZAO010000071.1:50950..51066;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAO010000071.1 RefSeq gene 51331 51579 . + . ID=gene-LDO50_RS08915;Name=LDO50_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08915;old_locus_tag=BVI1335_1620040 NZ_CAJZAO010000071.1 Protein Homology CDS 51331 51579 . + 0 ID=cds-WP_045579293.1;Parent=gene-LDO50_RS08915;Dbxref=GenBank:WP_045579293.1;Name=WP_045579293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363482.1;locus_tag=LDO50_RS08915;product=pentapeptide MXKDX repeat protein;protein_id=WP_045579293.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 51724 52356 . + . ID=gene-LDO50_RS08920;Name=LDO50_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08920;old_locus_tag=BVI1335_1620041 NZ_CAJZAO010000071.1 Protein Homology CDS 51724 52356 . + 0 ID=cds-WP_011884093.1;Parent=gene-LDO50_RS08920;Dbxref=GenBank:WP_011884093.1;Name=WP_011884093.1;Ontology_term=GO:0005506,GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884093.1;locus_tag=LDO50_RS08920;product=cytochrome b/b6 domain-containing protein;protein_id=WP_011884093.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 52386 53174 . + . ID=gene-LDO50_RS08925;Name=LDO50_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08925;old_locus_tag=BVI1335_1620037 NZ_CAJZAO010000071.1 Protein Homology CDS 52386 53174 . + 0 ID=cds-WP_011884095.1;Parent=gene-LDO50_RS08925;Dbxref=GenBank:WP_011884095.1;Name=WP_011884095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754215.1;locus_tag=LDO50_RS08925;product=molybdopterin-dependent oxidoreductase;protein_id=WP_011884095.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 53622 54812 . + . ID=gene-LDO50_RS08930;Name=LDO50_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08930;old_locus_tag=BVI1335_1620042 NZ_CAJZAO010000071.1 Protein Homology CDS 53622 54812 . + 0 ID=cds-WP_059888337.1;Parent=gene-LDO50_RS08930;Dbxref=GenBank:WP_059888337.1;Name=WP_059888337.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656444.1;locus_tag=LDO50_RS08930;product=EamA family transporter;protein_id=WP_059888337.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 54832 56031 . - . ID=gene-LDO50_RS08935;Name=LDO50_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08935;old_locus_tag=BVI1335_1620043 NZ_CAJZAO010000071.1 Protein Homology CDS 54832 56031 . - 0 ID=cds-WP_011884099.1;Parent=gene-LDO50_RS08935;Dbxref=GenBank:WP_011884099.1;Name=WP_011884099.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884099.1;locus_tag=LDO50_RS08935;product=MFS transporter;protein_id=WP_011884099.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 56441 57265 . - . ID=gene-LDO50_RS08940;Name=LDO50_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08940;old_locus_tag=BVI1335_1620044 NZ_CAJZAO010000071.1 Protein Homology CDS 56441 57265 . - 0 ID=cds-WP_224019631.1;Parent=gene-LDO50_RS08940;Dbxref=GenBank:WP_224019631.1;Name=WP_224019631.1;Ontology_term=GO:0004112;gbkey=CDS;go_function=cyclic-nucleotide phosphodiesterase activity|0004112||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762416.1;locus_tag=LDO50_RS08940;product=phosphodiesterase;protein_id=WP_224019631.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 57304 58335 . - . ID=gene-LDO50_RS08945;Name=LDO50_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08945;old_locus_tag=BVI1335_1620045 NZ_CAJZAO010000071.1 Protein Homology CDS 57304 58335 . - 0 ID=cds-WP_034193221.1;Parent=gene-LDO50_RS08945;Dbxref=GenBank:WP_034193221.1;Name=WP_034193221.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497656.1;locus_tag=LDO50_RS08945;product=ABC transporter ATP-binding protein;protein_id=WP_034193221.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 58362 59258 . - . ID=gene-LDO50_RS08950;Name=LDO50_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08950;old_locus_tag=BVI1335_1620046 NZ_CAJZAO010000071.1 Protein Homology CDS 58362 59258 . - 0 ID=cds-WP_224019632.1;Parent=gene-LDO50_RS08950;Dbxref=GenBank:WP_224019632.1;Name=WP_224019632.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755746.1;locus_tag=LDO50_RS08950;product=ABC transporter permease;protein_id=WP_224019632.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 59269 60093 . - . ID=gene-LDO50_RS08955;Name=LDO50_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08955;old_locus_tag=BVI1335_1620047 NZ_CAJZAO010000071.1 Protein Homology CDS 59269 60093 . - 0 ID=cds-WP_014722781.1;Parent=gene-LDO50_RS08955;Dbxref=GenBank:WP_014722781.1;Name=WP_014722781.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255790.1;locus_tag=LDO50_RS08955;product=ABC transporter permease;protein_id=WP_014722781.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 60111 61139 . - . ID=gene-LDO50_RS08960;Name=LDO50_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08960;old_locus_tag=BVI1335_1620048 NZ_CAJZAO010000071.1 Protein Homology CDS 60111 61139 . - 0 ID=cds-WP_224019633.1;Parent=gene-LDO50_RS08960;Dbxref=GenBank:WP_224019633.1;Name=WP_224019633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476396.1;locus_tag=LDO50_RS08960;product=ABC transporter substrate-binding protein;protein_id=WP_224019633.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 61211 62236 . - . ID=gene-LDO50_RS08965;Name=LDO50_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08965;old_locus_tag=BVI1335_1620049 NZ_CAJZAO010000071.1 Protein Homology CDS 61211 62236 . - 0 ID=cds-WP_126220100.1;Parent=gene-LDO50_RS08965;Dbxref=GenBank:WP_126220100.1;Name=WP_126220100.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545033.1;locus_tag=LDO50_RS08965;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_126220100.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 63525 66056 . + . ID=gene-LDO50_RS08970;Name=LDO50_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08970;old_locus_tag=BVI1335_1620050 NZ_CAJZAO010000071.1 Protein Homology CDS 63525 66056 . + 0 ID=cds-WP_014722782.1;Parent=gene-LDO50_RS08970;Dbxref=GenBank:WP_014722782.1;Name=WP_014722782.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363630.1;locus_tag=LDO50_RS08970;product=type VI secretion system Vgr family protein;protein_id=WP_014722782.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 66062 67036 . + . ID=gene-LDO50_RS08975;Name=LDO50_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08975;old_locus_tag=BVI1335_1620051 NZ_CAJZAO010000071.1 Protein Homology CDS 66062 67036 . + 0 ID=cds-WP_041493804.1;Parent=gene-LDO50_RS08975;Dbxref=GenBank:WP_041493804.1;Name=WP_041493804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899046.1;locus_tag=LDO50_RS08975;product=DUF4123 domain-containing protein;protein_id=WP_041493804.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 67080 69980 . + . ID=gene-LDO50_RS08980;Name=LDO50_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08980;old_locus_tag=BVI1335_1620053 NZ_CAJZAO010000071.1 Protein Homology CDS 67080 69980 . + 0 ID=cds-WP_014722783.1;Parent=gene-LDO50_RS08980;Dbxref=GenBank:WP_014722783.1;Name=WP_014722783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884201.1;locus_tag=LDO50_RS08980;product=T6SS effector BTH_I2691 family protein;protein_id=WP_014722783.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 69977 70708 . + . ID=gene-LDO50_RS08985;Name=LDO50_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08985;old_locus_tag=BVI1335_1620054 NZ_CAJZAO010000071.1 Protein Homology CDS 69977 70708 . + 0 ID=cds-WP_011884203.1;Parent=gene-LDO50_RS08985;Dbxref=GenBank:WP_011884203.1;Name=WP_011884203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884203.1;locus_tag=LDO50_RS08985;product=putative type VI secretion system effector;protein_id=WP_011884203.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 70720 70971 . + . ID=gene-LDO50_RS08990;Name=LDO50_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS08990;old_locus_tag=BVI1335_1620055 NZ_CAJZAO010000071.1 Protein Homology CDS 70720 70971 . + 0 ID=cds-WP_011884205.1;Parent=gene-LDO50_RS08990;Dbxref=GenBank:WP_011884205.1;Name=WP_011884205.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899051.1;locus_tag=LDO50_RS08990;product=PAAR domain-containing protein;protein_id=WP_011884205.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 71023 72834 . - . ID=gene-LDO50_RS08995;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LDO50_RS08995;old_locus_tag=BVI1335_1620056 NZ_CAJZAO010000071.1 Protein Homology CDS 71023 72834 . - 0 ID=cds-WP_045579288.1;Parent=gene-LDO50_RS08995;Dbxref=GenBank:WP_045579288.1;Name=WP_045579288.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884207.1;locus_tag=LDO50_RS08995;product=type VI secretion system baseplate subunit TssF;protein_id=WP_045579288.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 73768 74913 . + . ID=gene-LDO50_RS09000;Name=LDO50_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09000;old_locus_tag=BVI1335_1620059 NZ_CAJZAO010000071.1 Protein Homology CDS 73768 74913 . + 0 ID=cds-WP_011884212.1;Parent=gene-LDO50_RS09000;Dbxref=GenBank:WP_011884212.1;Name=WP_011884212.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478783.1;locus_tag=LDO50_RS09000;product=porin;protein_id=WP_011884212.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 75127 75753 . + . ID=gene-LDO50_RS09005;Name=LDO50_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09005;old_locus_tag=BVI1335_1620060 NZ_CAJZAO010000071.1 Protein Homology CDS 75127 75753 . + 0 ID=cds-WP_014722788.1;Parent=gene-LDO50_RS09005;Dbxref=GenBank:WP_014722788.1;Name=WP_014722788.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476389.1;locus_tag=LDO50_RS09005;product=flavin reductase family protein;protein_id=WP_014722788.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 76026 76709 . + . ID=gene-LDO50_RS09010;Name=LDO50_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09010;old_locus_tag=BVI1335_1620061 NZ_CAJZAO010000071.1 Protein Homology CDS 76026 76709 . + 0 ID=cds-WP_175994370.1;Parent=gene-LDO50_RS09010;Dbxref=GenBank:WP_175994370.1;Name=WP_175994370.1;Ontology_term=GO:0006974,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722789.1;locus_tag=LDO50_RS09010;product=SOS response-associated peptidase family protein;protein_id=WP_175994370.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 76987 78417 . + . ID=gene-LDO50_RS09015;Name=LDO50_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09015;old_locus_tag=BVI1335_1620062 NZ_CAJZAO010000071.1 Protein Homology CDS 76987 78417 . + 0 ID=cds-WP_034193226.1;Parent=gene-LDO50_RS09015;Dbxref=GenBank:WP_034193226.1;Name=WP_034193226.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656461.1;locus_tag=LDO50_RS09015;product=purine-cytosine permease family protein;protein_id=WP_034193226.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 78491 79447 . - . ID=gene-LDO50_RS09020;Name=LDO50_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09020;old_locus_tag=BVI1335_1620063 NZ_CAJZAO010000071.1 Protein Homology CDS 78491 79447 . - 0 ID=cds-WP_011884220.1;Parent=gene-LDO50_RS09020;Dbxref=GenBank:WP_011884220.1;Name=WP_011884220.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884220.1;locus_tag=LDO50_RS09020;product=LysR family transcriptional regulator;protein_id=WP_011884220.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 79651 80961 . + . ID=gene-LDO50_RS09025;Name=LDO50_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09025;old_locus_tag=BVI1335_1620064 NZ_CAJZAO010000071.1 Protein Homology CDS 79651 80961 . + 0 ID=cds-WP_014722791.1;Parent=gene-LDO50_RS09025;Dbxref=GenBank:WP_014722791.1;Name=WP_014722791.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722791.1;locus_tag=LDO50_RS09025;product=MFS transporter;protein_id=WP_014722791.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 81095 82360 . + . ID=gene-LDO50_RS09030;Name=LDO50_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09030;old_locus_tag=BVI1335_1620065 NZ_CAJZAO010000071.1 Protein Homology CDS 81095 82360 . + 0 ID=cds-WP_224019634.1;Parent=gene-LDO50_RS09030;Dbxref=GenBank:WP_224019634.1;Name=WP_224019634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753995.1;locus_tag=LDO50_RS09030;product=Zn-dependent hydrolase;protein_id=WP_224019634.1;transl_table=11 NZ_CAJZAO010000071.1 RefSeq gene 82385 83407 . + . ID=gene-LDO50_RS09035;Name=LDO50_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09035;old_locus_tag=BVI1335_1620066 NZ_CAJZAO010000071.1 Protein Homology CDS 82385 83407 . + 0 ID=cds-WP_224019635.1;Parent=gene-LDO50_RS09035;Dbxref=GenBank:WP_224019635.1;Name=WP_224019635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545050.1;locus_tag=LDO50_RS09035;product=histone deacetylase family protein;protein_id=WP_224019635.1;transl_table=11 ##sequence-region NZ_CAJZAO010000072.1 1 22521 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000072.1 RefSeq region 1 22521 . + . ID=NZ_CAJZAO010000072.1:1..22521;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_163 NZ_CAJZAO010000072.1 RefSeq gene 1 1000 . + . ID=gene-LDO50_RS09040;Name=LDO50_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09040;old_locus_tag=BVI1335_1630001;partial=true;start_range=.,1 NZ_CAJZAO010000072.1 Protein Homology CDS 1 1000 . + 1 ID=cds-WP_224019636.1;Parent=gene-LDO50_RS09040;Dbxref=GenBank:WP_224019636.1;Name=WP_224019636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880412.1;locus_tag=LDO50_RS09040;partial=true;product=bifunctional aminoglycoside phosphotransferase/ATP-binding protein;protein_id=WP_224019636.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000072.1 RefSeq gene 1047 1496 . - . ID=gene-LDO50_RS09045;Name=LDO50_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09045;old_locus_tag=BVI1335_1630002 NZ_CAJZAO010000072.1 Protein Homology CDS 1047 1496 . - 0 ID=cds-WP_011880413.1;Parent=gene-LDO50_RS09045;Dbxref=GenBank:WP_011880413.1;Name=WP_011880413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880413.1;locus_tag=LDO50_RS09045;product=CBS domain-containing protein;protein_id=WP_011880413.1;transl_table=11 NZ_CAJZAO010000072.1 RefSeq gene 1725 2189 . - . ID=gene-LDO50_RS09050;Name=LDO50_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09050;old_locus_tag=BVI1335_1630003 NZ_CAJZAO010000072.1 Protein Homology CDS 1725 2189 . - 0 ID=cds-WP_011880414.1;Parent=gene-LDO50_RS09050;Dbxref=GenBank:WP_011880414.1;Name=WP_011880414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880414.1;locus_tag=LDO50_RS09050;product=hypothetical protein;protein_id=WP_011880414.1;transl_table=11 NZ_CAJZAO010000072.1 RefSeq gene 2337 2888 . - . ID=gene-LDO50_RS09055;Name=LDO50_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09055 NZ_CAJZAO010000072.1 GeneMarkS-2+ CDS 2337 2888 . - 0 ID=cds-WP_124260128.1;Parent=gene-LDO50_RS09055;Dbxref=GenBank:WP_124260128.1;Name=WP_124260128.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS09055;product=hypothetical protein;protein_id=WP_124260128.1;transl_table=11 NZ_CAJZAO010000072.1 RefSeq gene 2937 3395 . - . ID=gene-LDO50_RS09060;Name=LDO50_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09060;old_locus_tag=BVI1335_1630005 NZ_CAJZAO010000072.1 Protein Homology CDS 2937 3395 . - 0 ID=cds-WP_050781993.1;Parent=gene-LDO50_RS09060;Dbxref=GenBank:WP_050781993.1;Name=WP_050781993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726053.1;locus_tag=LDO50_RS09060;product=hypothetical protein;protein_id=WP_050781993.1;transl_table=11 NZ_CAJZAO010000072.1 RefSeq gene 3474 3923 . - . ID=gene-LDO50_RS09065;Name=LDO50_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09065;old_locus_tag=BVI1335_1630006 NZ_CAJZAO010000072.1 Protein Homology CDS 3474 3923 . - 0 ID=cds-WP_011880417.1;Parent=gene-LDO50_RS09065;Dbxref=GenBank:WP_011880417.1;Name=WP_011880417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372500.1;locus_tag=LDO50_RS09065;product=CBS domain-containing protein;protein_id=WP_011880417.1;transl_table=11 NZ_CAJZAO010000072.1 RefSeq gene 4418 4633 . + . ID=gene-LDO50_RS09070;Name=LDO50_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09070;old_locus_tag=BVI1335_1630007 NZ_CAJZAO010000072.1 Protein Homology CDS 4418 4633 . + 0 ID=cds-WP_043292689.1;Parent=gene-LDO50_RS09070;Dbxref=GenBank:WP_043292689.1;Name=WP_043292689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726057.1;locus_tag=LDO50_RS09070;product=hypothetical protein;protein_id=WP_043292689.1;transl_table=11 NZ_CAJZAO010000072.1 RefSeq gene 4920 5936 . + . ID=gene-LDO50_RS09075;Name=LDO50_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09075;old_locus_tag=BVI1335_1630008 NZ_CAJZAO010000072.1 Protein Homology CDS 4920 5936 . + 0 ID=cds-WP_011880419.1;Parent=gene-LDO50_RS09075;Dbxref=GenBank:WP_011880419.1;Name=WP_011880419.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880419.1;locus_tag=LDO50_RS09075;product=Crp/Fnr family transcriptional regulator;protein_id=WP_011880419.1;transl_table=11 NZ_CAJZAO010000072.1 RefSeq gene 5956 6489 . - . ID=gene-LDO50_RS09080;Name=LDO50_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09080 NZ_CAJZAO010000072.1 GeneMarkS-2+ CDS 5956 6489 . - 0 ID=cds-WP_224019638.1;Parent=gene-LDO50_RS09080;Dbxref=GenBank:WP_224019638.1;Name=WP_224019638.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS09080;product=hypothetical protein;protein_id=WP_224019638.1;transl_table=11 NZ_CAJZAO010000072.1 RefSeq gene 6842 7828 . + . ID=gene-LDO50_RS09085;Name=LDO50_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09085;old_locus_tag=BVI1335_1630010 NZ_CAJZAO010000072.1 Protein Homology CDS 6842 7828 . + 0 ID=cds-WP_224019639.1;Parent=gene-LDO50_RS09085;Dbxref=GenBank:WP_224019639.1;Name=WP_224019639.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF019350.6;locus_tag=LDO50_RS09085;product=sensor histidine kinase;protein_id=WP_224019639.1;transl_table=11 NZ_CAJZAO010000072.1 RefSeq gene 7917 8807 . - . ID=gene-LDO50_RS09090;Name=LDO50_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09090;old_locus_tag=BVI1335_1630011 NZ_CAJZAO010000072.1 Protein Homology CDS 7917 8807 . - 0 ID=cds-WP_011880422.1;Parent=gene-LDO50_RS09090;Dbxref=GenBank:WP_011880422.1;Name=WP_011880422.1;Ontology_term=GO:0006865,GO:0016597,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=amino acid binding|0016597||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726062.1;locus_tag=LDO50_RS09090;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_011880422.1;transl_table=11 NZ_CAJZAO010000072.1 RefSeq gene 9115 12492 . - . ID=gene-LDO50_RS09095;Name=LDO50_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09095;old_locus_tag=BVI1335_1630012 NZ_CAJZAO010000072.1 Protein Homology CDS 9115 12492 . - 0 ID=cds-WP_011880423.1;Parent=gene-LDO50_RS09095;Dbxref=GenBank:WP_011880423.1;Name=WP_011880423.1;Ontology_term=GO:0007155,GO:0015031;gbkey=CDS;go_process=cell adhesion|0007155||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336870.1;locus_tag=LDO50_RS09095;product=YadA family autotransporter adhesin;protein_id=WP_011880423.1;transl_table=11 NZ_CAJZAO010000072.1 RefSeq gene 13479 14294 . + . ID=gene-LDO50_RS09100;Name=LDO50_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09100;old_locus_tag=BVI1335_1630015 NZ_CAJZAO010000072.1 Protein Homology CDS 13479 14294 . + 0 ID=cds-WP_011880424.1;Parent=gene-LDO50_RS09100;Dbxref=GenBank:WP_011880424.1;Name=WP_011880424.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372407.1;locus_tag=LDO50_RS09100;product=response regulator transcription factor;protein_id=WP_011880424.1;transl_table=11 NZ_CAJZAO010000072.1 RefSeq gene 14623 15531 . + . ID=gene-LDO50_RS09105;Name=LDO50_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09105;old_locus_tag=BVI1335_1630016 NZ_CAJZAO010000072.1 Protein Homology CDS 14623 15531 . + 0 ID=cds-WP_011880425.1;Parent=gene-LDO50_RS09105;Dbxref=GenBank:WP_011880425.1;Name=WP_011880425.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880425.1;locus_tag=LDO50_RS09105;product=LysR family transcriptional regulator;protein_id=WP_011880425.1;transl_table=11 NZ_CAJZAO010000072.1 RefSeq gene 15892 16311 . - . ID=gene-LDO50_RS09110;Name=LDO50_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09110;old_locus_tag=BVI1335_1630017 NZ_CAJZAO010000072.1 Protein Homology CDS 15892 16311 . - 0 ID=cds-WP_175994729.1;Parent=gene-LDO50_RS09110;Dbxref=GenBank:WP_175994729.1;Name=WP_175994729.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880426.1;locus_tag=LDO50_RS09110;product=DoxX family protein;protein_id=WP_175994729.1;transl_table=11 NZ_CAJZAO010000072.1 RefSeq gene 16503 18299 . - . ID=gene-LDO50_RS09115;Name=LDO50_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09115;old_locus_tag=BVI1335_1630018 NZ_CAJZAO010000072.1 Protein Homology CDS 16503 18299 . - 0 ID=cds-WP_011880427.1;Parent=gene-LDO50_RS09115;Dbxref=GenBank:WP_011880427.1;Name=WP_011880427.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726070.1;locus_tag=LDO50_RS09115;product=ATP-binding protein;protein_id=WP_011880427.1;transl_table=11 NZ_CAJZAO010000072.1 RefSeq gene 18620 19045 . - . ID=gene-LDO50_RS09120;Name=LDO50_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09120;old_locus_tag=BVI1335_1630020 NZ_CAJZAO010000072.1 Protein Homology CDS 18620 19045 . - 0 ID=cds-WP_011880428.1;Parent=gene-LDO50_RS09120;Dbxref=GenBank:WP_011880428.1;Name=WP_011880428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337486.1;locus_tag=LDO50_RS09120;product=DUF3331 domain-containing protein;protein_id=WP_011880428.1;transl_table=11 NZ_CAJZAO010000072.1 RefSeq gene 19463 20443 . + . ID=gene-LDO50_RS09125;Name=LDO50_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09125;old_locus_tag=BVI1335_1630021 NZ_CAJZAO010000072.1 Protein Homology CDS 19463 20443 . + 0 ID=cds-WP_011880429.1;Parent=gene-LDO50_RS09125;Dbxref=GenBank:WP_011880429.1;Name=WP_011880429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767244.1;locus_tag=LDO50_RS09125;product=alpha/beta fold hydrolase;protein_id=WP_011880429.1;transl_table=11 NZ_CAJZAO010000072.1 RefSeq gene 20536 22113 . - . ID=gene-LDO50_RS09130;Name=LDO50_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09130;old_locus_tag=BVI1335_1630022 NZ_CAJZAO010000072.1 Protein Homology CDS 20536 22113 . - 0 ID=cds-WP_011880430.1;Parent=gene-LDO50_RS09130;Dbxref=GenBank:WP_011880430.1;Name=WP_011880430.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545664.1;locus_tag=LDO50_RS09130;product=MFS transporter;protein_id=WP_011880430.1;transl_table=11 NZ_CAJZAO010000072.1 RefSeq pseudogene 22197 22521 . + . ID=gene-LDO50_RS09135;Name=LDO50_RS09135;end_range=22521,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS09135;partial=true;pseudo=true NZ_CAJZAO010000072.1 Protein Homology CDS 22197 22521 . + 0 ID=cds-LDO50_RS09135;Parent=gene-LDO50_RS09135;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=22521,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545665.1;locus_tag=LDO50_RS09135;partial=true;product=biotin/lipoyl-binding protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000073.1 1 3695 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000073.1 RefSeq region 1 3695 . + . ID=NZ_CAJZAO010000073.1:1..3695;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_164 NZ_CAJZAO010000073.1 RefSeq pseudogene 1 492 . - . ID=gene-LDO50_RS09140;Name=LDO50_RS09140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS09140;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000073.1 Protein Homology CDS 1 492 . - 0 ID=cds-LDO50_RS09140;Parent=gene-LDO50_RS09140;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213359.1;locus_tag=LDO50_RS09140;partial=true;product=N(5)-hydroxyornithine transformylase PvdF;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000073.1 RefSeq gene 576 2885 . - . ID=gene-LDO50_RS09145;Name=LDO50_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09145;old_locus_tag=BVI1335_1640002 NZ_CAJZAO010000073.1 Protein Homology CDS 576 2885 . - 0 ID=cds-WP_372586084.1;Parent=gene-LDO50_RS09145;Dbxref=GenBank:WP_372586084.1;Name=WP_372586084.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404834.1;locus_tag=LDO50_RS09145;product=TonB-dependent siderophore receptor;protein_id=WP_372586084.1;transl_table=11 NZ_CAJZAO010000073.1 RefSeq gene 2932 3695 . - . ID=gene-LDO50_RS09150;Name=LDO50_RS09150;end_range=3695,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09150;old_locus_tag=BVI1335_1640003;partial=true NZ_CAJZAO010000073.1 Protein Homology CDS 2932 3695 . - 2 ID=cds-WP_224019642.1;Parent=gene-LDO50_RS09150;Dbxref=GenBank:WP_224019642.1;Name=WP_224019642.1;end_range=3695,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755667.1;locus_tag=LDO50_RS09150;partial=true;product=SidA/IucD/PvdA family monooxygenase;protein_id=WP_224019642.1;transl_table=11 ##sequence-region NZ_CAJZAO010000074.1 1 57061 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000074.1 RefSeq region 1 57061 . + . ID=NZ_CAJZAO010000074.1:1..57061;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_165 NZ_CAJZAO010000074.1 RefSeq gene 143 2344 . - . ID=gene-LDO50_RS09155;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=LDO50_RS09155;old_locus_tag=BVI1335_1650001 NZ_CAJZAO010000074.1 Protein Homology CDS 143 2344 . - 0 ID=cds-WP_124260104.1;Parent=gene-LDO50_RS09155;Dbxref=GenBank:WP_124260104.1;Name=WP_124260104.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880557.1;locus_tag=LDO50_RS09155;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_124260104.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 2341 3120 . - . ID=gene-LDO50_RS09160;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=LDO50_RS09160;old_locus_tag=BVI1335_1650002 NZ_CAJZAO010000074.1 Protein Homology CDS 2341 3120 . - 0 ID=cds-WP_124260105.1;Parent=gene-LDO50_RS09160;Dbxref=GenBank:WP_124260105.1;Name=WP_124260105.1;Ontology_term=GO:0090540;gbkey=CDS;gene=bcsQ;go_process=bacterial cellulose biosynthetic process|0090540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008924336.1;locus_tag=LDO50_RS09160;product=cellulose biosynthesis protein BcsQ;protein_id=WP_124260105.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 3117 3554 . - . ID=gene-LDO50_RS09165;Name=bcsP;gbkey=Gene;gene=bcsP;gene_biotype=protein_coding;locus_tag=LDO50_RS09165;old_locus_tag=BVI1335_1650003 NZ_CAJZAO010000074.1 Protein Homology CDS 3117 3554 . - 0 ID=cds-WP_308117486.1;Parent=gene-LDO50_RS09165;Dbxref=GenBank:WP_308117486.1;Name=WP_308117486.1;gbkey=CDS;gene=bcsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880559.1;locus_tag=LDO50_RS09165;product=cellulose biosynthesis protein BcsP;protein_id=WP_308117486.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 3582 4037 . - . ID=gene-LDO50_RS09170;Name=bcsD;gbkey=Gene;gene=bcsD;gene_biotype=protein_coding;locus_tag=LDO50_RS09170;old_locus_tag=BVI1335_1650004 NZ_CAJZAO010000074.1 Protein Homology CDS 3582 4037 . - 0 ID=cds-WP_124260107.1;Parent=gene-LDO50_RS09170;Dbxref=GenBank:WP_124260107.1;Name=WP_124260107.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsD;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880560.1;locus_tag=LDO50_RS09170;product=cellulose biosynthesis protein BcsD;protein_id=WP_124260107.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 4317 4550 . - . ID=gene-LDO50_RS09175;Name=LDO50_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09175;old_locus_tag=BVI1335_1650005 NZ_CAJZAO010000074.1 Protein Homology CDS 4317 4550 . - 0 ID=cds-WP_011880561.1;Parent=gene-LDO50_RS09175;Dbxref=GenBank:WP_011880561.1;Name=WP_011880561.1;Ontology_term=GO:0044780,GO:0045893;gbkey=CDS;go_process=bacterial-type flagellum assembly|0044780||IEA,positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880561.1;locus_tag=LDO50_RS09175;product=flagellar transcriptional regulator FlhD;protein_id=WP_011880561.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 4758 4982 . - . ID=gene-LDO50_RS09180;Name=LDO50_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09180;old_locus_tag=BVI1335_1650006 NZ_CAJZAO010000074.1 Protein Homology CDS 4758 4982 . - 0 ID=cds-WP_059703086.1;Parent=gene-LDO50_RS09180;Dbxref=GenBank:WP_059703086.1;Name=WP_059703086.1;Ontology_term=GO:0044780,GO:0045893;gbkey=CDS;go_process=bacterial-type flagellum assembly|0044780||IEA,positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726206.1;locus_tag=LDO50_RS09180;product=flagellar transcriptional regulator FlhD;protein_id=WP_059703086.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 5330 6214 . + . ID=gene-LDO50_RS09185;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=LDO50_RS09185;old_locus_tag=BVI1335_1650008 NZ_CAJZAO010000074.1 Protein Homology CDS 5330 6214 . + 0 ID=cds-WP_011880563.1;Parent=gene-LDO50_RS09185;Dbxref=GenBank:WP_011880563.1;Name=WP_011880563.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880563.1;locus_tag=LDO50_RS09185;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_011880563.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 6310 6891 . + . ID=gene-LDO50_RS09190;Name=LDO50_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09190;old_locus_tag=BVI1335_1650009 NZ_CAJZAO010000074.1 Protein Homology CDS 6310 6891 . + 0 ID=cds-WP_059474598.1;Parent=gene-LDO50_RS09190;Dbxref=GenBank:WP_059474598.1;Name=WP_059474598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880564.1;locus_tag=LDO50_RS09190;product=phosphatase PAP2 family protein;protein_id=WP_059474598.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 7081 8346 . + . ID=gene-LDO50_RS09195;Name=LDO50_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09195;old_locus_tag=BVI1335_1650010 NZ_CAJZAO010000074.1 Protein Homology CDS 7081 8346 . + 0 ID=cds-WP_069239728.1;Parent=gene-LDO50_RS09195;Dbxref=GenBank:WP_069239728.1;Name=WP_069239728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880565.1;locus_tag=LDO50_RS09195;product=glycosyltransferase WbuB;protein_id=WP_069239728.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 8378 9784 . + . ID=gene-LDO50_RS09200;Name=LDO50_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09200;old_locus_tag=BVI1335_1650011 NZ_CAJZAO010000074.1 Protein Homology CDS 8378 9784 . + 0 ID=cds-WP_069239727.1;Parent=gene-LDO50_RS09200;Dbxref=GenBank:WP_069239727.1;Name=WP_069239727.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765450.1;locus_tag=LDO50_RS09200;product=UDP-glucose dehydrogenase family protein;protein_id=WP_069239727.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 9832 11157 . + . ID=gene-LDO50_RS09205;Name=LDO50_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09205;old_locus_tag=BVI1335_1650012 NZ_CAJZAO010000074.1 Protein Homology CDS 9832 11157 . + 0 ID=cds-WP_124260108.1;Parent=gene-LDO50_RS09205;Dbxref=GenBank:WP_124260108.1;Name=WP_124260108.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: protein motif:HMM:NF012744.6;locus_tag=LDO50_RS09205;product=glycosyltransferase family 4 protein;protein_id=WP_124260108.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 12203 13288 . - . ID=gene-LDO50_RS09210;Name=LDO50_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09210;old_locus_tag=BVI1335_1650014 NZ_CAJZAO010000074.1 Protein Homology CDS 12203 13288 . - 0 ID=cds-WP_124260109.1;Parent=gene-LDO50_RS09210;Dbxref=GenBank:WP_124260109.1;Name=WP_124260109.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF013884.7;locus_tag=LDO50_RS09210;product=acyltransferase family protein;protein_id=WP_124260109.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 13295 14857 . - . ID=gene-LDO50_RS09215;Name=LDO50_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09215 NZ_CAJZAO010000074.1 GeneMarkS-2+ CDS 13295 14857 . - 0 ID=cds-WP_224019644.1;Parent=gene-LDO50_RS09215;Dbxref=GenBank:WP_224019644.1;Name=WP_224019644.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS09215;product=hypothetical protein;protein_id=WP_224019644.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 14978 16279 . - . ID=gene-LDO50_RS09220;Name=LDO50_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09220;old_locus_tag=BVI1335_1650017 NZ_CAJZAO010000074.1 GeneMarkS-2+ CDS 14978 16279 . - 0 ID=cds-WP_224019645.1;Parent=gene-LDO50_RS09220;Dbxref=GenBank:WP_224019645.1;Name=WP_224019645.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS09220;product=hypothetical protein;protein_id=WP_224019645.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 16654 17874 . - . ID=gene-LDO50_RS09225;Name=LDO50_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09225;old_locus_tag=BVI1335_1650020 NZ_CAJZAO010000074.1 Protein Homology CDS 16654 17874 . - 0 ID=cds-WP_069239725.1;Parent=gene-LDO50_RS09225;Dbxref=GenBank:WP_069239725.1;Name=WP_069239725.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024831.6;locus_tag=LDO50_RS09225;product=glycosyltransferase;protein_id=WP_069239725.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 17955 18554 . - . ID=gene-LDO50_RS09230;Name=LDO50_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09230;old_locus_tag=BVI1335_1650022 NZ_CAJZAO010000074.1 Protein Homology CDS 17955 18554 . - 0 ID=cds-WP_080484382.1;Parent=gene-LDO50_RS09230;Dbxref=GenBank:WP_080484382.1;Name=WP_080484382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017876890.1;locus_tag=LDO50_RS09230;product=putative colanic acid biosynthesis acetyltransferase;protein_id=WP_080484382.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 18551 19711 . - . ID=gene-LDO50_RS09235;Name=LDO50_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09235;old_locus_tag=BVI1335_1650023 NZ_CAJZAO010000074.1 Protein Homology CDS 18551 19711 . - 0 ID=cds-WP_124260112.1;Parent=gene-LDO50_RS09235;Dbxref=GenBank:WP_124260112.1;Name=WP_124260112.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007584955.1;locus_tag=LDO50_RS09235;product=glycosyltransferase;protein_id=WP_124260112.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 19738 20985 . - . ID=gene-LDO50_RS09240;Name=LDO50_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09240;old_locus_tag=BVI1335_1650024 NZ_CAJZAO010000074.1 Protein Homology CDS 19738 20985 . - 0 ID=cds-WP_069239723.1;Parent=gene-LDO50_RS09240;Dbxref=GenBank:WP_069239723.1;Name=WP_069239723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880575.1;locus_tag=LDO50_RS09240;product=hypothetical protein;protein_id=WP_069239723.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 20995 22122 . - . ID=gene-LDO50_RS09245;Name=LDO50_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09245;old_locus_tag=BVI1335_1650025 NZ_CAJZAO010000074.1 Protein Homology CDS 20995 22122 . - 0 ID=cds-WP_080484381.1;Parent=gene-LDO50_RS09245;Dbxref=GenBank:WP_080484381.1;Name=WP_080484381.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: protein motif:HMM:NF045194.3;locus_tag=LDO50_RS09245;product=glycosyltransferase family 4 protein;protein_id=WP_080484381.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 22135 23532 . - . ID=gene-LDO50_RS09250;Name=LDO50_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09250;old_locus_tag=BVI1335_1650027 NZ_CAJZAO010000074.1 Protein Homology CDS 22135 23532 . - 0 ID=cds-WP_224019646.1;Parent=gene-LDO50_RS09250;Dbxref=GenBank:WP_224019646.1;Name=WP_224019646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880576.1;locus_tag=LDO50_RS09250;product=oligosaccharide flippase family protein;protein_id=WP_224019646.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 23556 24506 . - . ID=gene-LDO50_RS09255;Name=LDO50_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09255;old_locus_tag=BVI1335_1650028 NZ_CAJZAO010000074.1 Protein Homology CDS 23556 24506 . - 0 ID=cds-WP_124260113.1;Parent=gene-LDO50_RS09255;Dbxref=GenBank:WP_124260113.1;Name=WP_124260113.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880577.1;locus_tag=LDO50_RS09255;product=GDP-L-fucose synthase family protein;protein_id=WP_124260113.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 24512 25630 . - . ID=gene-LDO50_RS09260;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=LDO50_RS09260;old_locus_tag=BVI1335_1650029 NZ_CAJZAO010000074.1 Protein Homology CDS 24512 25630 . - 0 ID=cds-WP_069239721.1;Parent=gene-LDO50_RS09260;Dbxref=GenBank:WP_069239721.1;Name=WP_069239721.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069784.1;locus_tag=LDO50_RS09260;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_069239721.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 25695 27908 . - . ID=gene-LDO50_RS09265;Name=LDO50_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09265;old_locus_tag=BVI1335_1650030 NZ_CAJZAO010000074.1 Protein Homology CDS 25695 27908 . - 0 ID=cds-WP_069239720.1;Parent=gene-LDO50_RS09265;Dbxref=GenBank:WP_069239720.1;Name=WP_069239720.1;Ontology_term=GO:0000271;gbkey=CDS;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880579.1;locus_tag=LDO50_RS09265;product=polysaccharide biosynthesis tyrosine autokinase;protein_id=WP_069239720.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 27911 28351 . - . ID=gene-LDO50_RS09270;Name=LDO50_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09270;old_locus_tag=BVI1335_1650031 NZ_CAJZAO010000074.1 Protein Homology CDS 27911 28351 . - 0 ID=cds-WP_069239719.1;Parent=gene-LDO50_RS09270;Dbxref=GenBank:WP_069239719.1;Name=WP_069239719.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880580.1;locus_tag=LDO50_RS09270;product=low molecular weight protein-tyrosine-phosphatase;protein_id=WP_069239719.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 28348 29520 . - . ID=gene-LDO50_RS09275;Name=LDO50_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09275;old_locus_tag=BVI1335_1650032 NZ_CAJZAO010000074.1 Protein Homology CDS 28348 29520 . - 0 ID=cds-WP_124260114.1;Parent=gene-LDO50_RS09275;Dbxref=GenBank:WP_124260114.1;Name=WP_124260114.1;Ontology_term=GO:0015774,GO:0015159,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=polysaccharide transmembrane transporter activity|0015159||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880581.1;locus_tag=LDO50_RS09275;product=polysaccharide biosynthesis/export family protein;protein_id=WP_124260114.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 29577 30956 . - . ID=gene-LDO50_RS09280;Name=LDO50_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09280;old_locus_tag=BVI1335_1650034 NZ_CAJZAO010000074.1 Protein Homology CDS 29577 30956 . - 0 ID=cds-WP_069239718.1;Parent=gene-LDO50_RS09280;Dbxref=GenBank:WP_069239718.1;Name=WP_069239718.1;Ontology_term=GO:0016780;gbkey=CDS;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018431805.1;locus_tag=LDO50_RS09280;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_069239718.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 31002 32519 . - . ID=gene-LDO50_RS09285;Name=LDO50_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09285;old_locus_tag=BVI1335_1650035 NZ_CAJZAO010000074.1 Protein Homology CDS 31002 32519 . - 0 ID=cds-WP_081335151.1;Parent=gene-LDO50_RS09285;Dbxref=GenBank:WP_081335151.1;Name=WP_081335151.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880583.1;locus_tag=LDO50_RS09285;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_081335151.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 32612 33574 . - . ID=gene-LDO50_RS09290;Name=LDO50_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09290;old_locus_tag=BVI1335_1650036 NZ_CAJZAO010000074.1 Protein Homology CDS 32612 33574 . - 0 ID=cds-WP_124260115.1;Parent=gene-LDO50_RS09290;Dbxref=GenBank:WP_124260115.1;Name=WP_124260115.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726223.1;locus_tag=LDO50_RS09290;product=GlxA family transcriptional regulator;protein_id=WP_124260115.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 34189 34446 . - . ID=gene-LDO50_RS09295;Name=LDO50_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09295;old_locus_tag=BVI1335_1650038 NZ_CAJZAO010000074.1 GeneMarkS-2+ CDS 34189 34446 . - 0 ID=cds-WP_124260116.1;Parent=gene-LDO50_RS09295;Dbxref=GenBank:WP_124260116.1;Name=WP_124260116.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS09295;product=hypothetical protein;protein_id=WP_124260116.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 34755 35090 . - . ID=gene-LDO50_RS09300;Name=LDO50_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09300 NZ_CAJZAO010000074.1 GeneMarkS-2+ CDS 34755 35090 . - 0 ID=cds-WP_124260117.1;Parent=gene-LDO50_RS09300;Dbxref=GenBank:WP_124260117.1;Name=WP_124260117.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS09300;product=hypothetical protein;protein_id=WP_124260117.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 35237 35698 . + . ID=gene-LDO50_RS09305;Name=LDO50_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09305;old_locus_tag=BVI1335_1650039 NZ_CAJZAO010000074.1 Protein Homology CDS 35237 35698 . + 0 ID=cds-WP_059668296.1;Parent=gene-LDO50_RS09305;Dbxref=GenBank:WP_059668296.1;Name=WP_059668296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880588.1;locus_tag=LDO50_RS09305;product=GDP-mannose mannosyl hydrolase;protein_id=WP_059668296.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 35787 36839 . - . ID=gene-LDO50_RS09310;Name=LDO50_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09310;old_locus_tag=BVI1335_1650040 NZ_CAJZAO010000074.1 Protein Homology CDS 35787 36839 . - 0 ID=cds-WP_372586085.1;Parent=gene-LDO50_RS09310;Dbxref=GenBank:WP_372586085.1;Name=WP_372586085.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880589.1;locus_tag=LDO50_RS09310;product=helix-turn-helix domain-containing protein;protein_id=WP_372586085.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 38533 39693 . + . ID=gene-LDO50_RS09315;Name=LDO50_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09315;old_locus_tag=BVI1335_1650047 NZ_CAJZAO010000074.1 Protein Homology CDS 38533 39693 . + 0 ID=cds-WP_059703111.1;Parent=gene-LDO50_RS09315;Dbxref=GenBank:WP_059703111.1;Name=WP_059703111.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880592.1;locus_tag=LDO50_RS09315;product=porin;protein_id=WP_059703111.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq pseudogene 39734 40265 . - . ID=gene-LDO50_RS09320;Name=LDO50_RS09320;end_range=40265,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS09320;partial=true;pseudo=true NZ_CAJZAO010000074.1 Protein Homology CDS 39734 40265 . - 0 ID=cds-LDO50_RS09320;Parent=gene-LDO50_RS09320;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015288,GO:0042834,GO:0009279,GO:0016020;end_range=40265,.;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756520.1;locus_tag=LDO50_RS09320;partial=true;product=OmpA family protein;pseudo=true;transl_table=11 NZ_CAJZAO010000074.1 RefSeq pseudogene 40400 41215 . - . ID=gene-LDO50_RS31060;Name=LDO50_RS31060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31060;old_locus_tag=BVI1335_1650050;pseudo=true NZ_CAJZAO010000074.1 Protein Homology CDS 40400 41215 . - 0 ID=cds-LDO50_RS31060;Parent=gene-LDO50_RS31060;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335082.1;locus_tag=LDO50_RS31060;product=YadA-like family protein;pseudo=true;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 41254 41760 . - . ID=gene-LDO50_RS09330;Name=LDO50_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09330;old_locus_tag=BVI1335_1650052 NZ_CAJZAO010000074.1 Protein Homology CDS 41254 41760 . - 0 ID=cds-WP_224019648.1;Parent=gene-LDO50_RS09330;Dbxref=GenBank:WP_224019648.1;Name=WP_224019648.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012698.6;locus_tag=LDO50_RS09330;product=response regulator transcription factor;protein_id=WP_224019648.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq pseudogene 41828 42013 . - . ID=gene-LDO50_RS09335;Name=LDO50_RS09335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS09335;partial=true;pseudo=true;start_range=.,41828 NZ_CAJZAO010000074.1 Protein Homology CDS 41828 42013 . - 0 ID=cds-LDO50_RS09335;Parent=gene-LDO50_RS09335;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.6;locus_tag=LDO50_RS09335;partial=true;product=response regulator;pseudo=true;start_range=.,41828;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 43996 44820 . + . ID=gene-LDO50_RS09340;Name=LDO50_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09340;old_locus_tag=BVI1335_1650055 NZ_CAJZAO010000074.1 Protein Homology CDS 43996 44820 . + 0 ID=cds-WP_124260119.1;Parent=gene-LDO50_RS09340;Dbxref=GenBank:WP_124260119.1;Name=WP_124260119.1;Ontology_term=GO:0000160,GO:0006355,GO:0007165,GO:0000156,GO:0003677,GO:0003700;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880598.1;locus_tag=LDO50_RS09340;product=response regulator transcription factor;protein_id=WP_124260119.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 44813 47167 . + . ID=gene-LDO50_RS09345;Name=LDO50_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09345;old_locus_tag=BVI1335_1650056 NZ_CAJZAO010000074.1 Protein Homology CDS 44813 47167 . + 0 ID=cds-WP_124260123.1;Parent=gene-LDO50_RS09345;Dbxref=GenBank:WP_124260123.1;Name=WP_124260123.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880599.1;locus_tag=LDO50_RS09345;product=sensor histidine kinase;protein_id=WP_124260123.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 47268 48356 . - . ID=gene-LDO50_RS09350;Name=yjfF;gbkey=Gene;gene=yjfF;gene_biotype=protein_coding;locus_tag=LDO50_RS09350;old_locus_tag=BVI1335_1650057 NZ_CAJZAO010000074.1 Protein Homology CDS 47268 48356 . - 0 ID=cds-WP_059462485.1;Parent=gene-LDO50_RS09350;Dbxref=GenBank:WP_059462485.1;Name=WP_059462485.1;Ontology_term=GO:0042875,GO:0103116,GO:0016020;gbkey=CDS;gene=yjfF;go_component=membrane|0016020||IEA;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026811.1;locus_tag=LDO50_RS09350;product=galactofuranose ABC transporter%2C permease protein YjfF;protein_id=WP_059462485.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 48353 49378 . - . ID=gene-LDO50_RS09355;Name=LDO50_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09355;old_locus_tag=BVI1335_1650058 NZ_CAJZAO010000074.1 Protein Homology CDS 48353 49378 . - 0 ID=cds-WP_059458291.1;Parent=gene-LDO50_RS09355;Dbxref=GenBank:WP_059458291.1;Name=WP_059458291.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891042.1;locus_tag=LDO50_RS09355;product=ABC transporter permease;protein_id=WP_059458291.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 49375 50889 . - . ID=gene-LDO50_RS09360;Name=LDO50_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09360;old_locus_tag=BVI1335_1650059 NZ_CAJZAO010000074.1 Protein Homology CDS 49375 50889 . - 0 ID=cds-WP_124260120.1;Parent=gene-LDO50_RS09360;Dbxref=GenBank:WP_124260120.1;Name=WP_124260120.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756526.1;locus_tag=LDO50_RS09360;product=sugar ABC transporter ATP-binding protein;protein_id=WP_124260120.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 50960 51922 . - . ID=gene-LDO50_RS09365;Name=LDO50_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09365;old_locus_tag=BVI1335_1650061 NZ_CAJZAO010000074.1 Protein Homology CDS 50960 51922 . - 0 ID=cds-WP_011880603.1;Parent=gene-LDO50_RS09365;Dbxref=GenBank:WP_011880603.1;Name=WP_011880603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880603.1;locus_tag=LDO50_RS09365;product=ABC transporter substrate-binding protein;protein_id=WP_011880603.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 52341 53399 . + . ID=gene-LDO50_RS09370;Name=LDO50_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09370;old_locus_tag=BVI1335_1650063 NZ_CAJZAO010000074.1 Protein Homology CDS 52341 53399 . + 0 ID=cds-WP_166677054.1;Parent=gene-LDO50_RS09370;Dbxref=GenBank:WP_166677054.1;Name=WP_166677054.1;Ontology_term=GO:0006265,GO:0003677,GO:0003917;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726237.1;locus_tag=LDO50_RS09370;product=DNA topoisomerase IB;protein_id=WP_166677054.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 53440 54564 . - . ID=gene-LDO50_RS09375;Name=pqqE;gbkey=Gene;gene=pqqE;gene_biotype=protein_coding;locus_tag=LDO50_RS09375;old_locus_tag=BVI1335_1650064 NZ_CAJZAO010000074.1 Protein Homology CDS 53440 54564 . - 0 ID=cds-WP_014726238.1;Parent=gene-LDO50_RS09375;Dbxref=GenBank:WP_014726238.1;Name=WP_014726238.1;Ontology_term=GO:0018149,GO:0018189,GO:0051539;gbkey=CDS;gene=pqqE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptide cross-linking|0018149||IEA,pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726238.1;locus_tag=LDO50_RS09375;product=pyrroloquinoline quinone biosynthesis protein PqqE;protein_id=WP_014726238.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 54566 54847 . - . ID=gene-LDO50_RS09380;Name=pqqD;gbkey=Gene;gene=pqqD;gene_biotype=protein_coding;locus_tag=LDO50_RS09380;old_locus_tag=BVI1335_1650065 NZ_CAJZAO010000074.1 Protein Homology CDS 54566 54847 . - 0 ID=cds-WP_011880606.1;Parent=gene-LDO50_RS09380;Dbxref=GenBank:WP_011880606.1;Name=WP_011880606.1;Ontology_term=GO:0018189,GO:0048038;gbkey=CDS;gene=pqqD;go_function=quinone binding|0048038||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751646.1;locus_tag=LDO50_RS09380;product=pyrroloquinoline quinone biosynthesis peptide chaperone PqqD;protein_id=WP_011880606.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 54844 55563 . - . ID=gene-LDO50_RS09385;Name=pqqC;gbkey=Gene;gene=pqqC;gene_biotype=protein_coding;locus_tag=LDO50_RS09385;old_locus_tag=BVI1335_1650066 NZ_CAJZAO010000074.1 Protein Homology CDS 54844 55563 . - 0 ID=cds-WP_046425562.1;Parent=gene-LDO50_RS09385;Dbxref=GenBank:WP_046425562.1;Name=WP_046425562.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqC;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726239.1;locus_tag=LDO50_RS09385;product=pyrroloquinoline-quinone synthase PqqC;protein_id=WP_046425562.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 55566 56489 . - . ID=gene-LDO50_RS09390;Name=pqqB;gbkey=Gene;gene=pqqB;gene_biotype=protein_coding;locus_tag=LDO50_RS09390;old_locus_tag=BVI1335_1650067 NZ_CAJZAO010000074.1 Protein Homology CDS 55566 56489 . - 0 ID=cds-WP_011880608.1;Parent=gene-LDO50_RS09390;Dbxref=GenBank:WP_011880608.1;Name=WP_011880608.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqB;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547063.1;locus_tag=LDO50_RS09390;product=pyrroloquinoline quinone biosynthesis protein PqqB;protein_id=WP_011880608.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 56554 56628 . - . ID=gene-LDO50_RS09395;Name=pqqA;gbkey=Gene;gene=pqqA;gene_biotype=protein_coding;locus_tag=LDO50_RS09395;old_locus_tag=BVI1335_1650068 NZ_CAJZAO010000074.1 Protein Homology CDS 56554 56628 . - 0 ID=cds-WP_006410019.1;Parent=gene-LDO50_RS09395;Dbxref=GenBank:WP_006410019.1;Name=WP_006410019.1;Ontology_term=GO:0018189,GO:0003824;gbkey=CDS;gene=pqqA;go_function=catalytic activity|0003824||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007178434.1;locus_tag=LDO50_RS09395;product=pyrroloquinoline quinone precursor peptide PqqA;protein_id=WP_006410019.1;transl_table=11 NZ_CAJZAO010000074.1 RefSeq gene 56929 57061 . - . ID=gene-LDO50_RS09400;Name=LDO50_RS09400;end_range=57061,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09400;partial=true NZ_CAJZAO010000074.1 Protein Homology CDS 56929 57061 . - 1 ID=cds-WP_372586086.1;Parent=gene-LDO50_RS09400;Dbxref=GenBank:WP_372586086.1;Name=WP_372586086.1;Ontology_term=GO:0043565;end_range=57061,.;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880609.1;locus_tag=LDO50_RS09400;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_372586086.1;transl_table=11 ##sequence-region NZ_CAJZAO010000075.1 1 9751 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000075.1 RefSeq region 1 9751 . + . ID=NZ_CAJZAO010000075.1:1..9751;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_166 NZ_CAJZAO010000075.1 RefSeq pseudogene 127 636 . - . ID=gene-LDO50_RS09405;Name=LDO50_RS09405;end_range=636,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS09405;old_locus_tag=BVI1335_1660001;partial=true;pseudo=true;start_range=.,127 NZ_CAJZAO010000075.1 Protein Homology CDS 127 636 . - 0 ID=cds-LDO50_RS09405;Parent=gene-LDO50_RS09405;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=636,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611314.1;locus_tag=LDO50_RS09405;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,127;transl_table=11 NZ_CAJZAO010000075.1 RefSeq gene 702 1745 . + . ID=gene-LDO50_RS09410;Name=LDO50_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09410;old_locus_tag=BVI1335_1660002 NZ_CAJZAO010000075.1 Protein Homology CDS 702 1745 . + 0 ID=cds-WP_176295796.1;Parent=gene-LDO50_RS09410;Dbxref=GenBank:WP_176295796.1;Name=WP_176295796.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011087397.1;locus_tag=LDO50_RS09410;product=IS110 family transposase;protein_id=WP_176295796.1;transl_table=11 NZ_CAJZAO010000075.1 RefSeq pseudogene 1998 2255 . - . ID=gene-LDO50_RS09415;Name=LDO50_RS09415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS09415;old_locus_tag=BVI1335_1660004;partial=true;pseudo=true;start_range=.,1998 NZ_CAJZAO010000075.1 Protein Homology CDS 1998 2255 . - 0 ID=cds-LDO50_RS09415;Parent=gene-LDO50_RS09415;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611314.1;locus_tag=LDO50_RS09415;partial=true;product=transposase;pseudo=true;start_range=.,1998;transl_table=11 NZ_CAJZAO010000075.1 RefSeq gene 2521 3333 . - . ID=gene-LDO50_RS09420;Name=LDO50_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09420;old_locus_tag=BVI1335_1660005 NZ_CAJZAO010000075.1 Protein Homology CDS 2521 3333 . - 0 ID=cds-WP_224019650.1;Parent=gene-LDO50_RS09420;Dbxref=GenBank:WP_224019650.1;Name=WP_224019650.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023898.6;locus_tag=LDO50_RS09420;product=phage integrase family protein;protein_id=WP_224019650.1;transl_table=11 NZ_CAJZAO010000075.1 RefSeq gene 3335 4066 . - . ID=gene-LDO50_RS09425;Name=LDO50_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09425;old_locus_tag=BVI1335_1660006 NZ_CAJZAO010000075.1 GeneMarkS-2+ CDS 3335 4066 . - 0 ID=cds-WP_176295795.1;Parent=gene-LDO50_RS09425;Dbxref=GenBank:WP_176295795.1;Name=WP_176295795.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS09425;product=hypothetical protein;protein_id=WP_176295795.1;transl_table=11 NZ_CAJZAO010000075.1 RefSeq gene 4075 4296 . - . ID=gene-LDO50_RS09430;Name=LDO50_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09430;old_locus_tag=BVI1335_1660007 NZ_CAJZAO010000075.1 GeneMarkS-2+ CDS 4075 4296 . - 0 ID=cds-WP_176295794.1;Parent=gene-LDO50_RS09430;Dbxref=GenBank:WP_176295794.1;Name=WP_176295794.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS09430;product=hypothetical protein;protein_id=WP_176295794.1;transl_table=11 NZ_CAJZAO010000075.1 RefSeq gene 4565 4759 . - . ID=gene-LDO50_RS09435;Name=LDO50_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09435;old_locus_tag=BVI1335_1660009 NZ_CAJZAO010000075.1 GeneMarkS-2+ CDS 4565 4759 . - 0 ID=cds-WP_176295793.1;Parent=gene-LDO50_RS09435;Dbxref=GenBank:WP_176295793.1;Name=WP_176295793.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS09435;product=hypothetical protein;protein_id=WP_176295793.1;transl_table=11 NZ_CAJZAO010000075.1 RefSeq gene 4756 5475 . - . ID=gene-LDO50_RS09440;Name=LDO50_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09440;old_locus_tag=BVI1335_1660010 NZ_CAJZAO010000075.1 Protein Homology CDS 4756 5475 . - 0 ID=cds-WP_224019651.1;Parent=gene-LDO50_RS09440;Dbxref=GenBank:WP_224019651.1;Name=WP_224019651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018310695.1;locus_tag=LDO50_RS09440;product=hypothetical protein;protein_id=WP_224019651.1;transl_table=11 NZ_CAJZAO010000075.1 RefSeq gene 6673 6951 . - . ID=gene-LDO50_RS09445;Name=LDO50_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09445;old_locus_tag=BVI1335_1660013 NZ_CAJZAO010000075.1 Protein Homology CDS 6673 6951 . - 0 ID=cds-WP_011879678.1;Parent=gene-LDO50_RS09445;Dbxref=GenBank:WP_011879678.1;Name=WP_011879678.1;Ontology_term=GO:0030261,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879678.1;locus_tag=LDO50_RS09445;product=HU family DNA-binding protein;protein_id=WP_011879678.1;transl_table=11 NZ_CAJZAO010000075.1 RefSeq gene 7349 8449 . - . ID=gene-LDO50_RS09450;Name=LDO50_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09450;old_locus_tag=BVI1335_1660014 NZ_CAJZAO010000075.1 Protein Homology CDS 7349 8449 . - 0 ID=cds-WP_140994958.1;Parent=gene-LDO50_RS09450;Dbxref=GenBank:WP_140994958.1;Name=WP_140994958.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.6;locus_tag=LDO50_RS09450;product=tyrosine-type recombinase/integrase;protein_id=WP_140994958.1;transl_table=11 NZ_CAJZAO010000075.1 RefSeq gene 8501 8647 . - . ID=gene-LDO50_RS09455;Name=LDO50_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09455 NZ_CAJZAO010000075.1 Protein Homology CDS 8501 8647 . - 0 ID=cds-WP_124260287.1;Parent=gene-LDO50_RS09455;Dbxref=GenBank:WP_124260287.1;Name=WP_124260287.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024750.6;locus_tag=LDO50_RS09455;product=Arm DNA-binding domain-containing protein;protein_id=WP_124260287.1;transl_table=11 NZ_CAJZAO010000075.1 RefSeq gene 8937 9467 . + . ID=gene-LDO50_RS09460;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=LDO50_RS09460;old_locus_tag=BVI1335_1660015 NZ_CAJZAO010000075.1 Protein Homology CDS 8937 9467 . + 0 ID=cds-WP_176295792.1;Parent=gene-LDO50_RS09460;Dbxref=GenBank:WP_176295792.1;Name=WP_176295792.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217807.1;locus_tag=LDO50_RS09460;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_176295792.1;transl_table=11 NZ_CAJZAO010000075.1 RefSeq pseudogene 9505 9751 . + . ID=gene-LDO50_RS09465;Name=LDO50_RS09465;end_range=9751,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS09465;partial=true;pseudo=true NZ_CAJZAO010000075.1 Protein Homology CDS 9505 9751 . + 0 ID=cds-LDO50_RS09465;Parent=gene-LDO50_RS09465;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=9751,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498597.1;locus_tag=LDO50_RS09465;partial=true;product=cytochrome c biogenesis protein DipZ;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000076.1 1 7857 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000076.1 RefSeq region 1 7857 . + . ID=NZ_CAJZAO010000076.1:1..7857;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_167 NZ_CAJZAO010000076.1 RefSeq gene 1 710 . - . ID=gene-LDO50_RS09470;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=LDO50_RS09470;partial=true;start_range=.,1 NZ_CAJZAO010000076.1 Protein Homology CDS 1 710 . - 0 ID=cds-WP_224019652.1;Parent=gene-LDO50_RS09470;Dbxref=GenBank:WP_224019652.1;Name=WP_224019652.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004547598.1;locus_tag=LDO50_RS09470;partial=true;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=WP_224019652.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000076.1 RefSeq gene 743 1588 . - . ID=gene-LDO50_RS09475;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=LDO50_RS09475;old_locus_tag=BVI1335_1670002 NZ_CAJZAO010000076.1 Protein Homology CDS 743 1588 . - 0 ID=cds-WP_011883030.1;Parent=gene-LDO50_RS09475;Dbxref=GenBank:WP_011883030.1;Name=WP_011883030.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477155.1;locus_tag=LDO50_RS09475;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_011883030.1;transl_table=11 NZ_CAJZAO010000076.1 RefSeq gene 1585 2469 . - . ID=gene-LDO50_RS09480;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=LDO50_RS09480;old_locus_tag=BVI1335_1670003 NZ_CAJZAO010000076.1 Protein Homology CDS 1585 2469 . - 0 ID=cds-WP_041493739.1;Parent=gene-LDO50_RS09480;Dbxref=GenBank:WP_041493739.1;Name=WP_041493739.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906395.1;locus_tag=LDO50_RS09480;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_041493739.1;transl_table=11 NZ_CAJZAO010000076.1 RefSeq gene 2567 3901 . - . ID=gene-LDO50_RS09485;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=LDO50_RS09485;old_locus_tag=BVI1335_1670005 NZ_CAJZAO010000076.1 Protein Homology CDS 2567 3901 . - 0 ID=cds-WP_011883028.1;Parent=gene-LDO50_RS09485;Dbxref=GenBank:WP_011883028.1;Name=WP_011883028.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407003.1;locus_tag=LDO50_RS09485;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_011883028.1;transl_table=11 NZ_CAJZAO010000076.1 RefSeq gene 3992 5200 . - . ID=gene-LDO50_RS09490;Name=LDO50_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09490;old_locus_tag=BVI1335_1670006 NZ_CAJZAO010000076.1 Protein Homology CDS 3992 5200 . - 0 ID=cds-WP_011883027.1;Parent=gene-LDO50_RS09490;Dbxref=GenBank:WP_011883027.1;Name=WP_011883027.1;Ontology_term=GO:0016793;gbkey=CDS;go_function=triphosphoric monoester hydrolase activity|0016793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411276.1;locus_tag=LDO50_RS09490;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=WP_011883027.1;transl_table=11 NZ_CAJZAO010000076.1 RefSeq gene 5242 6321 . - . ID=gene-LDO50_RS09495;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=LDO50_RS09495;old_locus_tag=BVI1335_1670007 NZ_CAJZAO010000076.1 Protein Homology CDS 5242 6321 . - 0 ID=cds-WP_014722299.1;Parent=gene-LDO50_RS09495;Dbxref=GenBank:WP_014722299.1;Name=WP_014722299.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004545609.1;locus_tag=LDO50_RS09495;product=3-dehydroquinate synthase;protein_id=WP_014722299.1;transl_table=11 NZ_CAJZAO010000076.1 RefSeq gene 6318 6872 . - . ID=gene-LDO50_RS09500;Name=LDO50_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09500;old_locus_tag=BVI1335_1670008 NZ_CAJZAO010000076.1 Protein Homology CDS 6318 6872 . - 0 ID=cds-WP_011883025.1;Parent=gene-LDO50_RS09500;Dbxref=GenBank:WP_011883025.1;Name=WP_011883025.1;Ontology_term=GO:0008652,GO:0009073,GO:0000287,GO:0004765,GO:0005524;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,shikimate kinase activity|0004765||IEA,ATP binding|0005524||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492299.1;locus_tag=LDO50_RS09500;product=shikimate kinase;protein_id=WP_011883025.1;transl_table=11 NZ_CAJZAO010000076.1 RefSeq pseudogene 6913 7857 . - . ID=gene-LDO50_RS09505;Name=LDO50_RS09505;end_range=7857,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS09505;old_locus_tag=BVI1335_1670009;partial=true;pseudo=true NZ_CAJZAO010000076.1 Protein Homology CDS 6913 7857 . - 0 ID=cds-LDO50_RS09505;Parent=gene-LDO50_RS09505;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=7857,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362906.1;locus_tag=LDO50_RS09505;partial=true;product=secretin N-terminal domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000077.1 1 25834 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000077.1 RefSeq region 1 25834 . + . ID=NZ_CAJZAO010000077.1:1..25834;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_168 NZ_CAJZAO010000077.1 RefSeq gene 1 551 . - . ID=gene-LDO50_RS09510;Name=LDO50_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09510;partial=true;start_range=.,1 NZ_CAJZAO010000077.1 Protein Homology CDS 1 551 . - 0 ID=cds-WP_372586087.1;Parent=gene-LDO50_RS09510;Dbxref=GenBank:WP_372586087.1;Name=WP_372586087.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017844185.1;locus_tag=LDO50_RS09510;partial=true;product=glycosyltransferase family 9 protein;protein_id=WP_372586087.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000077.1 RefSeq gene 548 1159 . - . ID=gene-LDO50_RS09515;Name=LDO50_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09515;old_locus_tag=BVI1335_1680002 NZ_CAJZAO010000077.1 Protein Homology CDS 548 1159 . - 0 ID=cds-WP_011879842.1;Parent=gene-LDO50_RS09515;Dbxref=GenBank:WP_011879842.1;Name=WP_011879842.1;Ontology_term=GO:0034200,GO:0046872;gbkey=CDS;go_function=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase activity|0034200||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755683.1;locus_tag=LDO50_RS09515;product=D-glycero-alpha-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase;protein_id=WP_011879842.1;transl_table=11 NZ_CAJZAO010000077.1 RefSeq gene 1150 1899 . - . ID=gene-LDO50_RS09520;Name=LDO50_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09520;old_locus_tag=BVI1335_1680003 NZ_CAJZAO010000077.1 Protein Homology CDS 1150 1899 . - 0 ID=cds-WP_014725663.1;Parent=gene-LDO50_RS09520;Dbxref=GenBank:WP_014725663.1;Name=WP_014725663.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498377.1;locus_tag=LDO50_RS09520;product=SDR family oxidoreductase;protein_id=WP_014725663.1;transl_table=11 NZ_CAJZAO010000077.1 RefSeq gene 2091 2618 . - . ID=gene-LDO50_RS09525;Name=LDO50_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09525;old_locus_tag=BVI1335_1680004 NZ_CAJZAO010000077.1 Protein Homology CDS 2091 2618 . - 0 ID=cds-WP_043292740.1;Parent=gene-LDO50_RS09525;Dbxref=GenBank:WP_043292740.1;Name=WP_043292740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755681.1;locus_tag=LDO50_RS09525;product=hypothetical protein;protein_id=WP_043292740.1;transl_table=11 NZ_CAJZAO010000077.1 RefSeq gene 2560 5238 . - . ID=gene-LDO50_RS09530;Name=LDO50_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09530;old_locus_tag=BVI1335_1680005 NZ_CAJZAO010000077.1 Protein Homology CDS 2560 5238 . - 0 ID=cds-WP_059497242.1;Parent=gene-LDO50_RS09530;Dbxref=GenBank:WP_059497242.1;Name=WP_059497242.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762234.1;locus_tag=LDO50_RS09530;product=ABC transporter transmembrane domain-containing protein;protein_id=WP_059497242.1;transl_table=11 NZ_CAJZAO010000077.1 RefSeq gene 5403 6269 . - . ID=gene-LDO50_RS09535;Name=LDO50_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09535;old_locus_tag=BVI1335_1680006 NZ_CAJZAO010000077.1 Protein Homology CDS 5403 6269 . - 0 ID=cds-WP_059497221.1;Parent=gene-LDO50_RS09535;Dbxref=GenBank:WP_059497221.1;Name=WP_059497221.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725660.1;locus_tag=LDO50_RS09535;product=BON domain-containing protein;protein_id=WP_059497221.1;transl_table=11 NZ_CAJZAO010000077.1 RefSeq gene 6785 7132 . - . ID=gene-LDO50_RS09540;Name=LDO50_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09540;old_locus_tag=BVI1335_1680007 NZ_CAJZAO010000077.1 Protein Homology CDS 6785 7132 . - 0 ID=cds-WP_224019653.1;Parent=gene-LDO50_RS09540;Dbxref=GenBank:WP_224019653.1;Name=WP_224019653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879837.1;locus_tag=LDO50_RS09540;product=chemotaxis protein;protein_id=WP_224019653.1;transl_table=11 NZ_CAJZAO010000077.1 RefSeq gene 7389 8978 . + . ID=gene-LDO50_RS09545;Name=LDO50_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09545;old_locus_tag=BVI1335_1680008 NZ_CAJZAO010000077.1 Protein Homology CDS 7389 8978 . + 0 ID=cds-WP_059497219.1;Parent=gene-LDO50_RS09545;Dbxref=GenBank:WP_059497219.1;Name=WP_059497219.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725658.1;locus_tag=LDO50_RS09545;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_059497219.1;transl_table=11 NZ_CAJZAO010000077.1 RefSeq gene 8983 9318 . - . ID=gene-LDO50_RS09550;Name=LDO50_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09550;old_locus_tag=BVI1335_1680009 NZ_CAJZAO010000077.1 Protein Homology CDS 8983 9318 . - 0 ID=cds-WP_011879835.1;Parent=gene-LDO50_RS09550;Dbxref=GenBank:WP_011879835.1;Name=WP_011879835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879835.1;locus_tag=LDO50_RS09550;product=ferredoxin;protein_id=WP_011879835.1;transl_table=11 NZ_CAJZAO010000077.1 RefSeq gene 9348 10553 . - . ID=gene-LDO50_RS09555;Name=LDO50_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09555;old_locus_tag=BVI1335_1680010 NZ_CAJZAO010000077.1 Protein Homology CDS 9348 10553 . - 0 ID=cds-WP_059497216.1;Parent=gene-LDO50_RS09555;Dbxref=GenBank:WP_059497216.1;Name=WP_059497216.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004557884.1;locus_tag=LDO50_RS09555;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_059497216.1;transl_table=11 NZ_CAJZAO010000077.1 RefSeq gene 10753 11196 . - . ID=gene-LDO50_RS09560;Name=LDO50_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09560 NZ_CAJZAO010000077.1 GeneMarkS-2+ CDS 10753 11196 . - 0 ID=cds-WP_224019654.1;Parent=gene-LDO50_RS09560;Dbxref=GenBank:WP_224019654.1;Name=WP_224019654.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS09560;product=hypothetical protein;protein_id=WP_224019654.1;transl_table=11 NZ_CAJZAO010000077.1 RefSeq gene 11193 11462 . - . ID=gene-LDO50_RS09565;Name=LDO50_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09565;old_locus_tag=BVI1335_1680012 NZ_CAJZAO010000077.1 Protein Homology CDS 11193 11462 . - 0 ID=cds-WP_011879832.1;Parent=gene-LDO50_RS09565;Dbxref=GenBank:WP_011879832.1;Name=WP_011879832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725653.1;locus_tag=LDO50_RS09565;product=hypothetical protein;protein_id=WP_011879832.1;transl_table=11 NZ_CAJZAO010000077.1 RefSeq gene 11512 11769 . - . ID=gene-LDO50_RS09570;Name=LDO50_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09570;old_locus_tag=BVI1335_1680013 NZ_CAJZAO010000077.1 GeneMarkS-2+ CDS 11512 11769 . - 0 ID=cds-WP_059460763.1;Parent=gene-LDO50_RS09570;Dbxref=GenBank:WP_059460763.1;Name=WP_059460763.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS09570;product=hypothetical protein;protein_id=WP_059460763.1;transl_table=11 NZ_CAJZAO010000077.1 RefSeq gene 12261 13334 . + . ID=gene-LDO50_RS09575;Name=LDO50_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09575;old_locus_tag=BVI1335_1680015 NZ_CAJZAO010000077.1 Protein Homology CDS 12261 13334 . + 0 ID=cds-WP_224019655.1;Parent=gene-LDO50_RS09575;Dbxref=GenBank:WP_224019655.1;Name=WP_224019655.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498397.1;locus_tag=LDO50_RS09575;product=Dyp-type peroxidase;protein_id=WP_224019655.1;transl_table=11 NZ_CAJZAO010000077.1 RefSeq gene 13327 14142 . + . ID=gene-LDO50_RS09580;Name=LDO50_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09580;old_locus_tag=BVI1335_1680016 NZ_CAJZAO010000077.1 Protein Homology CDS 13327 14142 . + 0 ID=cds-WP_011879829.1;Parent=gene-LDO50_RS09580;Dbxref=GenBank:WP_011879829.1;Name=WP_011879829.1;Ontology_term=GO:0140737;gbkey=CDS;go_component=encapsulin nanocompartment|0140737||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879829.1;locus_tag=LDO50_RS09580;product=family 1 encapsulin nanocompartment shell protein;protein_id=WP_011879829.1;transl_table=11 NZ_CAJZAO010000077.1 RefSeq gene 14357 15778 . - . ID=gene-LDO50_RS09585;Name=LDO50_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09585;old_locus_tag=BVI1335_1680017 NZ_CAJZAO010000077.1 Protein Homology CDS 14357 15778 . - 0 ID=cds-WP_059497212.1;Parent=gene-LDO50_RS09585;Dbxref=GenBank:WP_059497212.1;Name=WP_059497212.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407378.1;locus_tag=LDO50_RS09585;product=purine-cytosine permease family protein;protein_id=WP_059497212.1;transl_table=11 NZ_CAJZAO010000077.1 RefSeq gene 16093 17016 . + . ID=gene-LDO50_RS09590;Name=LDO50_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09590;old_locus_tag=BVI1335_1680018 NZ_CAJZAO010000077.1 Protein Homology CDS 16093 17016 . + 0 ID=cds-WP_034195632.1;Parent=gene-LDO50_RS09590;Dbxref=GenBank:WP_034195632.1;Name=WP_034195632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372721.1;locus_tag=LDO50_RS09590;product=LysR substrate-binding domain-containing protein;protein_id=WP_034195632.1;transl_table=11 NZ_CAJZAO010000077.1 RefSeq gene 17039 18202 . - . ID=gene-LDO50_RS09595;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=LDO50_RS09595;old_locus_tag=BVI1335_1680020 NZ_CAJZAO010000077.1 Protein Homology CDS 17039 18202 . - 0 ID=cds-WP_046428940.1;Parent=gene-LDO50_RS09595;Dbxref=GenBank:WP_046428940.1;Name=WP_046428940.1;Ontology_term=GO:0006526,GO:0006592,GO:0008777;gbkey=CDS;gene=argE;go_function=acetylornithine deacetylase activity|0008777||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879826.1;locus_tag=LDO50_RS09595;product=acetylornithine deacetylase;protein_id=WP_046428940.1;transl_table=11 NZ_CAJZAO010000077.1 RefSeq gene 18195 18872 . - . ID=gene-LDO50_RS09600;Name=LDO50_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09600;old_locus_tag=BVI1335_1680021 NZ_CAJZAO010000077.1 Protein Homology CDS 18195 18872 . - 0 ID=cds-WP_011879825.1;Parent=gene-LDO50_RS09600;Dbxref=GenBank:WP_011879825.1;Name=WP_011879825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767485.1;locus_tag=LDO50_RS09600;product=DUF1028 domain-containing protein;protein_id=WP_011879825.1;transl_table=11 NZ_CAJZAO010000077.1 RefSeq gene 18869 19324 . - . ID=gene-LDO50_RS09605;Name=LDO50_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09605;old_locus_tag=BVI1335_1680022 NZ_CAJZAO010000077.1 Protein Homology CDS 18869 19324 . - 0 ID=cds-WP_011879824.1;Parent=gene-LDO50_RS09605;Dbxref=GenBank:WP_011879824.1;Name=WP_011879824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879824.1;locus_tag=LDO50_RS09605;product=RidA family protein;protein_id=WP_011879824.1;transl_table=11 NZ_CAJZAO010000077.1 RefSeq gene 19416 20759 . - . ID=gene-LDO50_RS09610;Name=LDO50_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09610;old_locus_tag=BVI1335_1680024 NZ_CAJZAO010000077.1 Protein Homology CDS 19416 20759 . - 0 ID=cds-WP_043292738.1;Parent=gene-LDO50_RS09610;Dbxref=GenBank:WP_043292738.1;Name=WP_043292738.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349681.1;locus_tag=LDO50_RS09610;product=flavin-containing monooxygenase;protein_id=WP_043292738.1;transl_table=11 NZ_CAJZAO010000077.1 RefSeq gene 21111 22124 . + . ID=gene-LDO50_RS09615;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=LDO50_RS09615;old_locus_tag=BVI1335_1680023 NZ_CAJZAO010000077.1 Protein Homology CDS 21111 22124 . + 0 ID=cds-WP_011879822.1;Parent=gene-LDO50_RS09615;Dbxref=GenBank:WP_011879822.1;Name=WP_011879822.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660578.1;locus_tag=LDO50_RS09615;product=tryptophan--tRNA ligase;protein_id=WP_011879822.1;transl_table=11 NZ_CAJZAO010000077.1 RefSeq gene 22209 24722 . - . ID=gene-LDO50_RS09620;Name=LDO50_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09620;old_locus_tag=BVI1335_1680026 NZ_CAJZAO010000077.1 Protein Homology CDS 22209 24722 . - 0 ID=cds-WP_011879821.1;Parent=gene-LDO50_RS09620;Dbxref=GenBank:WP_011879821.1;Name=WP_011879821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725636.1;locus_tag=LDO50_RS09620;product=EAL domain-containing protein;protein_id=WP_011879821.1;transl_table=11 NZ_CAJZAO010000077.1 RefSeq gene 25125 25680 . - . ID=gene-LDO50_RS09625;Name=LDO50_RS09625;end_range=25680,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09625;old_locus_tag=BVI1335_1680028;partial=true NZ_CAJZAO010000077.1 Protein Homology CDS 25125 25680 . - 1 ID=cds-WP_253074626.1;Parent=gene-LDO50_RS09625;Dbxref=GenBank:WP_253074626.1;Name=WP_253074626.1;end_range=25680,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725634.1;locus_tag=LDO50_RS09625;partial=true;product=LysR substrate-binding domain-containing protein;protein_id=WP_253074626.1;transl_table=11 ##sequence-region NZ_CAJZAO010000078.1 1 8404 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000078.1 RefSeq region 1 8404 . + . ID=NZ_CAJZAO010000078.1:1..8404;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_169 NZ_CAJZAO010000078.1 RefSeq pseudogene 1 897 . + . ID=gene-LDO50_RS09630;Name=LDO50_RS09630;end_range=897,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS09630;old_locus_tag=BVI1335_1690001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000078.1 Protein Homology CDS 1 897 . + 0 ID=cds-LDO50_RS09630;Parent=gene-LDO50_RS09630;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0030244,GO:0019867;end_range=897,.;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884385.1;locus_tag=LDO50_RS09630;partial=true;product=cellulose synthase subunit BcsC-related outer membrane protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000078.1 RefSeq gene 843 2348 . - . ID=gene-LDO50_RS09635;Name=LDO50_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09635;old_locus_tag=BVI1335_1690002 NZ_CAJZAO010000078.1 Protein Homology CDS 843 2348 . - 0 ID=cds-WP_372586088.1;Parent=gene-LDO50_RS09635;Dbxref=GenBank:WP_372586088.1;Name=WP_372586088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338599.1;locus_tag=LDO50_RS09635;product=FAD-binding oxidoreductase;protein_id=WP_372586088.1;transl_table=11 NZ_CAJZAO010000078.1 RefSeq gene 2389 3033 . - . ID=gene-LDO50_RS09640;Name=LDO50_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09640;old_locus_tag=BVI1335_1690003 NZ_CAJZAO010000078.1 Protein Homology CDS 2389 3033 . - 0 ID=cds-WP_011881434.1;Parent=gene-LDO50_RS09640;Dbxref=GenBank:WP_011881434.1;Name=WP_011881434.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900235.1;locus_tag=LDO50_RS09640;product=glutathione S-transferase family protein;protein_id=WP_011881434.1;transl_table=11 NZ_CAJZAO010000078.1 RefSeq gene 3160 4131 . + . ID=gene-LDO50_RS09645;Name=LDO50_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09645;old_locus_tag=BVI1335_1690004 NZ_CAJZAO010000078.1 Protein Homology CDS 3160 4131 . + 0 ID=cds-WP_034194924.1;Parent=gene-LDO50_RS09645;Dbxref=GenBank:WP_034194924.1;Name=WP_034194924.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881433.1;locus_tag=LDO50_RS09645;product=LysR family transcriptional regulator;protein_id=WP_034194924.1;transl_table=11 NZ_CAJZAO010000078.1 RefSeq gene 4206 4862 . - . ID=gene-LDO50_RS09650;Name=LDO50_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09650;old_locus_tag=BVI1335_1690005 NZ_CAJZAO010000078.1 Protein Homology CDS 4206 4862 . - 0 ID=cds-WP_045578235.1;Parent=gene-LDO50_RS09650;Dbxref=GenBank:WP_045578235.1;Name=WP_045578235.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750782.1;locus_tag=LDO50_RS09650;product=TetR/AcrR family transcriptional regulator;protein_id=WP_045578235.1;transl_table=11 NZ_CAJZAO010000078.1 RefSeq gene 4950 5852 . + . ID=gene-LDO50_RS09655;Name=LDO50_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09655;old_locus_tag=BVI1335_1690007 NZ_CAJZAO010000078.1 Protein Homology CDS 4950 5852 . + 0 ID=cds-WP_224019657.1;Parent=gene-LDO50_RS09655;Dbxref=GenBank:WP_224019657.1;Name=WP_224019657.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529196.1;locus_tag=LDO50_RS09655;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_224019657.1;transl_table=11 NZ_CAJZAO010000078.1 RefSeq gene 5849 7411 . + . ID=gene-LDO50_RS09660;Name=LDO50_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09660;old_locus_tag=BVI1335_1690006 NZ_CAJZAO010000078.1 Protein Homology CDS 5849 7411 . + 0 ID=cds-WP_060042986.1;Parent=gene-LDO50_RS09660;Dbxref=GenBank:WP_060042986.1;Name=WP_060042986.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217562.1;locus_tag=LDO50_RS09660;product=flavin-containing monooxygenase;protein_id=WP_060042986.1;transl_table=11 NZ_CAJZAO010000078.1 RefSeq gene 7419 8211 . + . ID=gene-LDO50_RS09665;Name=LDO50_RS09665;end_range=8211,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09665;old_locus_tag=BVI1335_1690008;partial=true NZ_CAJZAO010000078.1 Protein Homology CDS 7419 8211 . + 0 ID=cds-WP_443797754.1;Parent=gene-LDO50_RS09665;Dbxref=GenBank:WP_443797754.1;Name=WP_443797754.1;end_range=8211,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881429.1;locus_tag=LDO50_RS09665;partial=true;product=alpha/beta fold hydrolase;protein_id=WP_443797754.1;transl_table=11 NZ_CAJZAO010000078.1 RefSeq gene 8222 8404 . + . ID=gene-LDO50_RS31425;Name=LDO50_RS31425;end_range=8404,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31425;partial=true;start_range=.,8222 NZ_CAJZAO010000078.1 Protein Homology CDS 8222 8404 . + 0 ID=cds-WP_443797755.1;Parent=gene-LDO50_RS31425;Dbxref=GenBank:WP_443797755.1;Name=WP_443797755.1;end_range=8404,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412334.1;locus_tag=LDO50_RS31425;partial=true;product=alpha/beta fold hydrolase;protein_id=WP_443797755.1;start_range=.,8222;transl_table=11 ##sequence-region NZ_CAJZAO010000079.1 1 26090 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000079.1 RefSeq region 1 26090 . + . ID=NZ_CAJZAO010000079.1:1..26090;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_17 NZ_CAJZAO010000079.1 RefSeq pseudogene 1 250 . + . ID=gene-LDO50_RS31430;Name=LDO50_RS31430;end_range=250,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31430;old_locus_tag=BVI1335_170001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000079.1 Protein Homology CDS 1 250 . + 1 ID=cds-LDO50_RS31430;Parent=gene-LDO50_RS31430;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=250,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212654.1;locus_tag=LDO50_RS31430;partial=true;product=ammonia channel protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 261 809 . + . ID=gene-LDO50_RS09670;Name=LDO50_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09670;old_locus_tag=BVI1335_170002;partial=true;start_range=.,261 NZ_CAJZAO010000079.1 Protein Homology CDS 261 809 . + 0 ID=cds-WP_443797756.1;Parent=gene-LDO50_RS09670;Dbxref=GenBank:WP_443797756.1;Name=WP_443797756.1;Ontology_term=GO:0072488,GO:0008519,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212654.1;locus_tag=LDO50_RS09670;partial=true;product=ammonium transporter;protein_id=WP_443797756.1;start_range=.,261;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 1053 2342 . + . ID=gene-LDO50_RS09675;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=LDO50_RS09675;old_locus_tag=BVI1335_170003 NZ_CAJZAO010000079.1 Protein Homology CDS 1053 2342 . + 0 ID=cds-WP_014723704.1;Parent=gene-LDO50_RS09675;Dbxref=GenBank:WP_014723704.1;Name=WP_014723704.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013337902.1;locus_tag=LDO50_RS09675;product=glutamate--cysteine ligase;protein_id=WP_014723704.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 2368 3324 . + . ID=gene-LDO50_RS09680;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=LDO50_RS09680;old_locus_tag=BVI1335_170004 NZ_CAJZAO010000079.1 Protein Homology CDS 2368 3324 . + 0 ID=cds-WP_011886118.1;Parent=gene-LDO50_RS09680;Dbxref=GenBank:WP_011886118.1;Name=WP_011886118.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090583.1;locus_tag=LDO50_RS09680;product=glutathione synthase;protein_id=WP_011886118.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 3536 4006 . + . ID=gene-LDO50_RS09685;Name=LDO50_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09685;old_locus_tag=BVI1335_170005 NZ_CAJZAO010000079.1 Protein Homology CDS 3536 4006 . + 0 ID=cds-WP_011886117.1;Parent=gene-LDO50_RS09685;Dbxref=GenBank:WP_011886117.1;Name=WP_011886117.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198014.1;locus_tag=LDO50_RS09685;product=PTS sugar transporter subunit IIA;protein_id=WP_011886117.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 4083 4352 . + . ID=gene-LDO50_RS09690;Name=LDO50_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09690;old_locus_tag=BVI1335_170006 NZ_CAJZAO010000079.1 Protein Homology CDS 4083 4352 . + 0 ID=cds-WP_006477716.1;Parent=gene-LDO50_RS09690;Dbxref=GenBank:WP_006477716.1;Name=WP_006477716.1;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010101417.1;locus_tag=LDO50_RS09690;product=HPr family phosphocarrier protein;protein_id=WP_006477716.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 4552 6324 . + . ID=gene-LDO50_RS09695;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=LDO50_RS09695;old_locus_tag=BVI1335_170007 NZ_CAJZAO010000079.1 Protein Homology CDS 4552 6324 . + 0 ID=cds-WP_014723702.1;Parent=gene-LDO50_RS09695;Dbxref=GenBank:WP_014723702.1;Name=WP_014723702.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407042.1;locus_tag=LDO50_RS09695;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_014723702.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 6396 7148 . - . ID=gene-LDO50_RS09700;Name=LDO50_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09700;old_locus_tag=BVI1335_170008 NZ_CAJZAO010000079.1 Protein Homology CDS 6396 7148 . - 0 ID=cds-WP_011886115.1;Parent=gene-LDO50_RS09700;Dbxref=GenBank:WP_011886115.1;Name=WP_011886115.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329276.1;locus_tag=LDO50_RS09700;product=HesA/MoeB/ThiF family protein;protein_id=WP_011886115.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 7276 8817 . - . ID=gene-LDO50_RS09705;Name=LDO50_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09705;old_locus_tag=BVI1335_170009 NZ_CAJZAO010000079.1 Protein Homology CDS 7276 8817 . - 0 ID=cds-WP_011886114.1;Parent=gene-LDO50_RS09705;Dbxref=GenBank:WP_011886114.1;Name=WP_011886114.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398184.1;locus_tag=LDO50_RS09705;product=S41 family peptidase;protein_id=WP_011886114.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 9066 9812 . - . ID=gene-LDO50_RS09710;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=LDO50_RS09710;old_locus_tag=BVI1335_170010 NZ_CAJZAO010000079.1 Protein Homology CDS 9066 9812 . - 0 ID=cds-WP_011886113.1;Parent=gene-LDO50_RS09710;Dbxref=GenBank:WP_011886113.1;Name=WP_011886113.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658011.1;locus_tag=LDO50_RS09710;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_011886113.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 9958 10380 . + . ID=gene-LDO50_RS09715;Name=LDO50_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09715;old_locus_tag=BVI1335_170011 NZ_CAJZAO010000079.1 Protein Homology CDS 9958 10380 . + 0 ID=cds-WP_014723700.1;Parent=gene-LDO50_RS09715;Dbxref=GenBank:WP_014723700.1;Name=WP_014723700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723700.1;locus_tag=LDO50_RS09715;product=rhodanese-like domain-containing protein;protein_id=WP_014723700.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 10377 10637 . + . ID=gene-LDO50_RS09720;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=LDO50_RS09720;old_locus_tag=BVI1335_170012 NZ_CAJZAO010000079.1 Protein Homology CDS 10377 10637 . + 0 ID=cds-WP_011886111.1;Parent=gene-LDO50_RS09720;Dbxref=GenBank:WP_011886111.1;Name=WP_011886111.1;Ontology_term=GO:0045454;gbkey=CDS;gene=grxC;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200200.1;locus_tag=LDO50_RS09720;product=glutaredoxin 3;protein_id=WP_011886111.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 10746 11225 . + . ID=gene-LDO50_RS09725;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=LDO50_RS09725;old_locus_tag=BVI1335_170013 NZ_CAJZAO010000079.1 Protein Homology CDS 10746 11225 . + 0 ID=cds-WP_011658008.1;Parent=gene-LDO50_RS09725;Dbxref=GenBank:WP_011658008.1;Name=WP_011658008.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658008.1;locus_tag=LDO50_RS09725;product=protein-export chaperone SecB;protein_id=WP_011658008.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 11252 12250 . + . ID=gene-LDO50_RS09730;Name=LDO50_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09730;old_locus_tag=BVI1335_170014 NZ_CAJZAO010000079.1 Protein Homology CDS 11252 12250 . + 0 ID=cds-WP_014723699.1;Parent=gene-LDO50_RS09730;Dbxref=GenBank:WP_014723699.1;Name=WP_014723699.1;Ontology_term=GO:0046167,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate biosynthetic process|0046167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546282.1;locus_tag=LDO50_RS09730;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_014723699.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 12372 12896 . + . ID=gene-LDO50_RS09735;Name=LDO50_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09735;old_locus_tag=BVI1335_170015 NZ_CAJZAO010000079.1 Protein Homology CDS 12372 12896 . + 0 ID=cds-WP_011886109.1;Parent=gene-LDO50_RS09735;Dbxref=GenBank:WP_011886109.1;Name=WP_011886109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886109.1;locus_tag=LDO50_RS09735;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_011886109.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 12916 13386 . - . ID=gene-LDO50_RS09740;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=LDO50_RS09740;old_locus_tag=BVI1335_170016 NZ_CAJZAO010000079.1 Protein Homology CDS 12916 13386 . - 0 ID=cds-WP_011886108.1;Parent=gene-LDO50_RS09740;Dbxref=GenBank:WP_011886108.1;Name=WP_011886108.1;Ontology_term=GO:0006400,GO:0008175;gbkey=CDS;gene=trmL;go_function=tRNA methyltransferase activity|0008175||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763321.1;locus_tag=LDO50_RS09740;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_011886108.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 13504 14316 . - . ID=gene-LDO50_RS09745;Name=LDO50_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09745;old_locus_tag=BVI1335_170017 NZ_CAJZAO010000079.1 Protein Homology CDS 13504 14316 . - 0 ID=cds-WP_059696644.1;Parent=gene-LDO50_RS09745;Dbxref=GenBank:WP_059696644.1;Name=WP_059696644.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212659.1;locus_tag=LDO50_RS09745;product=ComF family protein;protein_id=WP_059696644.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 14399 15364 . + . ID=gene-LDO50_RS09750;Name=LDO50_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09750;old_locus_tag=BVI1335_170018 NZ_CAJZAO010000079.1 Protein Homology CDS 14399 15364 . + 0 ID=cds-WP_011886106.1;Parent=gene-LDO50_RS09750;Dbxref=GenBank:WP_011886106.1;Name=WP_011886106.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762484.1;locus_tag=LDO50_RS09750;product=methyltransferase domain-containing protein;protein_id=WP_011886106.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 15560 16084 . + . ID=gene-LDO50_RS09755;Name=LDO50_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09755;old_locus_tag=BVI1335_170019 NZ_CAJZAO010000079.1 Protein Homology CDS 15560 16084 . + 0 ID=cds-WP_045578759.1;Parent=gene-LDO50_RS09755;Dbxref=GenBank:WP_045578759.1;Name=WP_045578759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486400.1;locus_tag=LDO50_RS09755;product=DUF2244 domain-containing protein;protein_id=WP_045578759.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 16138 17724 . + . ID=gene-LDO50_RS09760;Name=coxB;gbkey=Gene;gene=coxB;gene_biotype=protein_coding;locus_tag=LDO50_RS09760;old_locus_tag=BVI1335_170021 NZ_CAJZAO010000079.1 Protein Homology CDS 16138 17724 . + 0 ID=cds-WP_011886104.1;Parent=gene-LDO50_RS09760;Dbxref=GenBank:WP_011886104.1;Name=WP_011886104.1;Ontology_term=GO:0004129,GO:0016020;gbkey=CDS;gene=coxB;go_component=membrane|0016020||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398197.1;locus_tag=LDO50_RS09760;product=cytochrome c oxidase subunit II;protein_id=WP_011886104.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 17768 19375 . + . ID=gene-LDO50_RS09765;Name=ctaD;gbkey=Gene;gene=ctaD;gene_biotype=protein_coding;locus_tag=LDO50_RS09765;old_locus_tag=BVI1335_170022 NZ_CAJZAO010000079.1 Protein Homology CDS 17768 19375 . + 0 ID=cds-WP_011886103.1;Parent=gene-LDO50_RS09765;Dbxref=GenBank:WP_011886103.1;Name=WP_011886103.1;Ontology_term=GO:0015990,GO:0004129;gbkey=CDS;gene=ctaD;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090602.1;locus_tag=LDO50_RS09765;product=cytochrome c oxidase subunit I;protein_id=WP_011886103.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 19468 19608 . + . ID=gene-LDO50_RS09770;Name=LDO50_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09770 NZ_CAJZAO010000079.1 Protein Homology CDS 19468 19608 . + 0 ID=cds-WP_006760728.1;Parent=gene-LDO50_RS09770;Dbxref=GenBank:WP_006760728.1;Name=WP_006760728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486385.1;locus_tag=LDO50_RS09770;product=cytochrome oxidase small assembly protein;protein_id=WP_006760728.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 19644 20252 . + . ID=gene-LDO50_RS09775;Name=LDO50_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09775;old_locus_tag=BVI1335_170023 NZ_CAJZAO010000079.1 Protein Homology CDS 19644 20252 . + 0 ID=cds-WP_014723693.1;Parent=gene-LDO50_RS09775;Dbxref=GenBank:WP_014723693.1;Name=WP_014723693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024429.1;locus_tag=LDO50_RS09775;product=cytochrome c oxidase assembly protein;protein_id=WP_014723693.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 20269 20469 . + . ID=gene-LDO50_RS09780;Name=LDO50_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09780;old_locus_tag=BVI1335_170024 NZ_CAJZAO010000079.1 Protein Homology CDS 20269 20469 . + 0 ID=cds-WP_011886101.1;Parent=gene-LDO50_RS09780;Dbxref=GenBank:WP_011886101.1;Name=WP_011886101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398201.1;locus_tag=LDO50_RS09780;product=DUF2970 domain-containing protein;protein_id=WP_011886101.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 20609 21466 . + . ID=gene-LDO50_RS09785;Name=LDO50_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09785;old_locus_tag=BVI1335_170025 NZ_CAJZAO010000079.1 Protein Homology CDS 20609 21466 . + 0 ID=cds-WP_011886100.1;Parent=gene-LDO50_RS09785;Dbxref=GenBank:WP_011886100.1;Name=WP_011886100.1;Ontology_term=GO:0009060,GO:0019646,GO:0004129,GO:0009055;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA,electron transfer activity|0009055||IEA;go_process=aerobic respiration|0009060||IEA,aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013587015.1;locus_tag=LDO50_RS09785;product=cytochrome c oxidase subunit 3;protein_id=WP_011886100.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 21705 21914 . - . ID=gene-LDO50_RS09790;Name=LDO50_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09790;old_locus_tag=BVI1335_170027 NZ_CAJZAO010000079.1 Protein Homology CDS 21705 21914 . - 0 ID=cds-WP_011886099.1;Parent=gene-LDO50_RS09790;Dbxref=GenBank:WP_011886099.1;Name=WP_011886099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334311.1;locus_tag=LDO50_RS09790;product=twin transmembrane helix small protein;protein_id=WP_011886099.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 21999 22709 . + . ID=gene-LDO50_RS09795;Name=LDO50_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09795;old_locus_tag=BVI1335_170026 NZ_CAJZAO010000079.1 Protein Homology CDS 21999 22709 . + 0 ID=cds-WP_011886098.1;Parent=gene-LDO50_RS09795;Dbxref=GenBank:WP_011886098.1;Name=WP_011886098.1;Ontology_term=GO:0033617,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=mitochondrial cytochrome c oxidase assembly|0033617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024434.1;locus_tag=LDO50_RS09795;product=SURF1 family protein;protein_id=WP_011886098.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 22770 23396 . + . ID=gene-LDO50_RS09800;Name=LDO50_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09800;old_locus_tag=BVI1335_170028 NZ_CAJZAO010000079.1 Protein Homology CDS 22770 23396 . + 0 ID=cds-WP_014723691.1;Parent=gene-LDO50_RS09800;Dbxref=GenBank:WP_014723691.1;Name=WP_014723691.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658000.1;locus_tag=LDO50_RS09800;product=SCO family protein;protein_id=WP_014723691.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 23422 24534 . + . ID=gene-LDO50_RS09805;Name=LDO50_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09805;old_locus_tag=BVI1335_170029 NZ_CAJZAO010000079.1 Protein Homology CDS 23422 24534 . + 0 ID=cds-WP_014723690.1;Parent=gene-LDO50_RS09805;Dbxref=GenBank:WP_014723690.1;Name=WP_014723690.1;Ontology_term=GO:0006783,GO:0017004,GO:0016491,GO:0020037,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=heme biosynthetic process|0006783||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895968.1;locus_tag=LDO50_RS09805;product=COX15/CtaA family protein;protein_id=WP_014723690.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 24543 25445 . + . ID=gene-LDO50_RS09810;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=LDO50_RS09810;old_locus_tag=BVI1335_170030 NZ_CAJZAO010000079.1 Protein Homology CDS 24543 25445 . + 0 ID=cds-WP_011886095.1;Parent=gene-LDO50_RS09810;Dbxref=GenBank:WP_011886095.1;Name=WP_011886095.1;Ontology_term=GO:0006783,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760735.1;locus_tag=LDO50_RS09810;product=heme o synthase;protein_id=WP_011886095.1;transl_table=11 NZ_CAJZAO010000079.1 RefSeq gene 25464 26081 . + . ID=gene-LDO50_RS09815;Name=LDO50_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09815;old_locus_tag=BVI1335_170031 NZ_CAJZAO010000079.1 Protein Homology CDS 25464 26081 . + 0 ID=cds-WP_014723689.1;Parent=gene-LDO50_RS09815;Dbxref=GenBank:WP_014723689.1;Name=WP_014723689.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009972812.1;locus_tag=LDO50_RS09815;product=SCO family protein;protein_id=WP_014723689.1;transl_table=11 ##sequence-region NZ_CAJZAO010000080.1 1 18378 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000080.1 RefSeq region 1 18378 . + . ID=NZ_CAJZAO010000080.1:1..18378;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_170 NZ_CAJZAO010000080.1 RefSeq gene 1 199 . - . ID=gene-LDO50_RS09820;Name=LDO50_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09820;partial=true;start_range=.,1 NZ_CAJZAO010000080.1 Protein Homology CDS 1 199 . - 0 ID=cds-WP_443797757.1;Parent=gene-LDO50_RS09820;Dbxref=GenBank:WP_443797757.1;Name=WP_443797757.1;Ontology_term=GO:0009055;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014193583.1;locus_tag=LDO50_RS09820;partial=true;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_443797757.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000080.1 RefSeq gene 433 1227 . - . ID=gene-LDO50_RS09825;Name=LDO50_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09825;old_locus_tag=BVI1335_1700002 NZ_CAJZAO010000080.1 Protein Homology CDS 433 1227 . - 0 ID=cds-WP_011883845.1;Parent=gene-LDO50_RS09825;Dbxref=GenBank:WP_011883845.1;Name=WP_011883845.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544895.1;locus_tag=LDO50_RS09825;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_011883845.1;transl_table=11 NZ_CAJZAO010000080.1 RefSeq gene 1255 1908 . - . ID=gene-LDO50_RS09830;Name=LDO50_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09830;old_locus_tag=BVI1335_1700003 NZ_CAJZAO010000080.1 Protein Homology CDS 1255 1908 . - 0 ID=cds-WP_011883843.1;Parent=gene-LDO50_RS09830;Dbxref=GenBank:WP_011883843.1;Name=WP_011883843.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016345956.1;locus_tag=LDO50_RS09830;product=methionine ABC transporter permease;protein_id=WP_011883843.1;transl_table=11 NZ_CAJZAO010000080.1 RefSeq gene 1898 2932 . - . ID=gene-LDO50_RS09835;Name=LDO50_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09835;old_locus_tag=BVI1335_1700004 NZ_CAJZAO010000080.1 Protein Homology CDS 1898 2932 . - 0 ID=cds-WP_034194145.1;Parent=gene-LDO50_RS09835;Dbxref=GenBank:WP_034194145.1;Name=WP_034194145.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889868.1;locus_tag=LDO50_RS09835;product=methionine ABC transporter ATP-binding protein;protein_id=WP_034194145.1;transl_table=11 NZ_CAJZAO010000080.1 RefSeq gene 3107 4069 . + . ID=gene-LDO50_RS09840;Name=LDO50_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09840;old_locus_tag=BVI1335_1700005 NZ_CAJZAO010000080.1 Protein Homology CDS 3107 4069 . + 0 ID=cds-WP_155754451.1;Parent=gene-LDO50_RS09840;Dbxref=GenBank:WP_155754451.1;Name=WP_155754451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722686.1;locus_tag=LDO50_RS09840;product=alpha/beta hydrolase;protein_id=WP_155754451.1;transl_table=11 NZ_CAJZAO010000080.1 RefSeq gene 4194 5117 . - . ID=gene-LDO50_RS09845;Name=LDO50_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09845;old_locus_tag=BVI1335_1700006 NZ_CAJZAO010000080.1 Protein Homology CDS 4194 5117 . - 0 ID=cds-WP_011883840.1;Parent=gene-LDO50_RS09845;Dbxref=GenBank:WP_011883840.1;Name=WP_011883840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889864.1;locus_tag=LDO50_RS09845;product=histone deacetylase family protein;protein_id=WP_011883840.1;transl_table=11 NZ_CAJZAO010000080.1 RefSeq gene 5288 6511 . + . ID=gene-LDO50_RS09850;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=LDO50_RS09850;old_locus_tag=BVI1335_1700007 NZ_CAJZAO010000080.1 Protein Homology CDS 5288 6511 . + 0 ID=cds-WP_059889525.1;Parent=gene-LDO50_RS09850;Dbxref=GenBank:WP_059889525.1;Name=WP_059889525.1;Ontology_term=GO:0009253,GO:0016757;gbkey=CDS;gene=mltB;go_function=glycosyltransferase activity|0016757||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722685.1;locus_tag=LDO50_RS09850;product=lytic murein transglycosylase B;protein_id=WP_059889525.1;transl_table=11 NZ_CAJZAO010000080.1 RefSeq gene 6611 7513 . - . ID=gene-LDO50_RS09855;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=LDO50_RS09855;old_locus_tag=BVI1335_1700008 NZ_CAJZAO010000080.1 Protein Homology CDS 6611 7513 . - 0 ID=cds-WP_011883837.1;Parent=gene-LDO50_RS09855;Dbxref=GenBank:WP_011883837.1;Name=WP_011883837.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476564.1;locus_tag=LDO50_RS09855;product=cysteine synthase CysM;protein_id=WP_011883837.1;transl_table=11 NZ_CAJZAO010000080.1 RefSeq gene 7719 8066 . - . ID=gene-LDO50_RS09860;Name=LDO50_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09860;old_locus_tag=BVI1335_1700009 NZ_CAJZAO010000080.1 Protein Homology CDS 7719 8066 . - 0 ID=cds-WP_011883835.1;Parent=gene-LDO50_RS09860;Dbxref=GenBank:WP_011883835.1;Name=WP_011883835.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750746.1;locus_tag=LDO50_RS09860;product=ComEA family DNA-binding protein;protein_id=WP_011883835.1;transl_table=11 NZ_CAJZAO010000080.1 RefSeq gene 8140 9132 . - . ID=gene-LDO50_RS09865;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=LDO50_RS09865;old_locus_tag=BVI1335_1700010 NZ_CAJZAO010000080.1 Protein Homology CDS 8140 9132 . - 0 ID=cds-WP_011883833.1;Parent=gene-LDO50_RS09865;Dbxref=GenBank:WP_011883833.1;Name=WP_011883833.1;Ontology_term=GO:0005975,GO:0009244,GO:0008712,GO:0050661;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA,NADP binding|0050661||IEA;go_process=carbohydrate metabolic process|0005975||IEA,lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904403.1;locus_tag=LDO50_RS09865;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_011883833.1;transl_table=11 NZ_CAJZAO010000080.1 RefSeq gene 9196 10146 . - . ID=gene-LDO50_RS09870;Name=rfaE1;gbkey=Gene;gene=rfaE1;gene_biotype=protein_coding;locus_tag=LDO50_RS09870;old_locus_tag=BVI1335_1700011 NZ_CAJZAO010000080.1 Protein Homology CDS 9196 10146 . - 0 ID=cds-WP_011883831.1;Parent=gene-LDO50_RS09870;Dbxref=GenBank:WP_011883831.1;Name=WP_011883831.1;Ontology_term=GO:0005975,GO:0016773,GO:0016779;gbkey=CDS;gene=rfaE1;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363349.1;locus_tag=LDO50_RS09870;product=D-glycero-beta-D-manno-heptose-7-phosphate kinase;protein_id=WP_011883831.1;transl_table=11 NZ_CAJZAO010000080.1 RefSeq gene 10154 11554 . - . ID=gene-LDO50_RS09875;Name=LDO50_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09875;old_locus_tag=BVI1335_1700012 NZ_CAJZAO010000080.1 Protein Homology CDS 10154 11554 . - 0 ID=cds-WP_011883830.1;Parent=gene-LDO50_RS09875;Dbxref=GenBank:WP_011883830.1;Name=WP_011883830.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363348.1;locus_tag=LDO50_RS09875;product=UDP-glucose dehydrogenase family protein;protein_id=WP_011883830.1;transl_table=11 NZ_CAJZAO010000080.1 RefSeq gene 11644 12816 . - . ID=gene-LDO50_RS09880;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=LDO50_RS09880;old_locus_tag=BVI1335_1700013 NZ_CAJZAO010000080.1 Protein Homology CDS 11644 12816 . - 0 ID=cds-WP_011883828.1;Parent=gene-LDO50_RS09880;Dbxref=GenBank:WP_011883828.1;Name=WP_011883828.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897725.1;locus_tag=LDO50_RS09880;product=lipopolysaccharide assembly protein LapB;protein_id=WP_011883828.1;transl_table=11 NZ_CAJZAO010000080.1 RefSeq gene 12870 13163 . - . ID=gene-LDO50_RS09885;Name=LDO50_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09885;old_locus_tag=BVI1335_1700014 NZ_CAJZAO010000080.1 Protein Homology CDS 12870 13163 . - 0 ID=cds-WP_011883826.1;Parent=gene-LDO50_RS09885;Dbxref=GenBank:WP_011883826.1;Name=WP_011883826.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195986.1;locus_tag=LDO50_RS09885;product=lipopolysaccharide assembly protein LapA domain-containing protein;protein_id=WP_011883826.1;transl_table=11 NZ_CAJZAO010000080.1 RefSeq gene 13372 13695 . - . ID=gene-LDO50_RS09890;Name=LDO50_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09890;old_locus_tag=BVI1335_1700015 NZ_CAJZAO010000080.1 Protein Homology CDS 13372 13695 . - 0 ID=cds-WP_006750752.1;Parent=gene-LDO50_RS09890;Dbxref=GenBank:WP_006750752.1;Name=WP_006750752.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486894.1;locus_tag=LDO50_RS09890;product=integration host factor subunit beta;protein_id=WP_006750752.1;transl_table=11 NZ_CAJZAO010000080.1 RefSeq gene 13718 15430 . - . ID=gene-LDO50_RS09895;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=LDO50_RS09895;old_locus_tag=BVI1335_1700016 NZ_CAJZAO010000080.1 Protein Homology CDS 13718 15430 . - 0 ID=cds-WP_224019658.1;Parent=gene-LDO50_RS09895;Dbxref=GenBank:WP_224019658.1;Name=WP_224019658.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025716.1;locus_tag=LDO50_RS09895;product=30S ribosomal protein S1;protein_id=WP_224019658.1;transl_table=11 NZ_CAJZAO010000080.1 RefSeq gene 15571 16257 . - . ID=gene-LDO50_RS09900;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=LDO50_RS09900;old_locus_tag=BVI1335_1700017 NZ_CAJZAO010000080.1 Protein Homology CDS 15571 16257 . - 0 ID=cds-WP_034194141.1;Parent=gene-LDO50_RS09900;Dbxref=GenBank:WP_034194141.1;Name=WP_034194141.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189396.1;locus_tag=LDO50_RS09900;product=(d)CMP kinase;protein_id=WP_034194141.1;transl_table=11 NZ_CAJZAO010000080.1 RefSeq gene 16271 17575 . - . ID=gene-LDO50_RS09905;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=LDO50_RS09905;old_locus_tag=BVI1335_1700018 NZ_CAJZAO010000080.1 Protein Homology CDS 16271 17575 . - 0 ID=cds-WP_034194140.1;Parent=gene-LDO50_RS09905;Dbxref=GenBank:WP_034194140.1;Name=WP_034194140.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009921655.1;locus_tag=LDO50_RS09905;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_034194140.1;transl_table=11 NZ_CAJZAO010000080.1 RefSeq gene 17589 18378 . - . ID=gene-LDO50_RS09910;Name=LDO50_RS09910;end_range=18378,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09910;old_locus_tag=BVI1335_1700019;partial=true NZ_CAJZAO010000080.1 Protein Homology CDS 17589 18378 . - 1 ID=cds-WP_224019659.1;Parent=gene-LDO50_RS09910;Dbxref=GenBank:WP_224019659.1;Name=WP_224019659.1;Ontology_term=GO:0006571,GO:0008977,GO:0033730,GO:0070403;end_range=18378,.;gbkey=CDS;go_function=prephenate dehydrogenase (NAD+) activity|0008977||IEA,arogenate dehydrogenase (NADP+) activity|0033730||IEA,NAD+ binding|0070403||IEA;go_process=tyrosine biosynthetic process|0006571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486923.1;locus_tag=LDO50_RS09910;partial=true;product=prephenate dehydrogenase/arogenate dehydrogenase family protein;protein_id=WP_224019659.1;transl_table=11 ##sequence-region NZ_CAJZAO010000081.1 1 19916 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000081.1 RefSeq region 1 19916 . + . ID=NZ_CAJZAO010000081.1:1..19916;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_171 NZ_CAJZAO010000081.1 RefSeq gene 1 759 . + . ID=gene-LDO50_RS09915;Name=LDO50_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09915;old_locus_tag=BVI1335_1710001;partial=true;start_range=.,1 NZ_CAJZAO010000081.1 Protein Homology CDS 1 759 . + 0 ID=cds-WP_224019660.1;Parent=gene-LDO50_RS09915;Dbxref=GenBank:WP_224019660.1;Name=WP_224019660.1;Ontology_term=GO:0015628,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350855.1;locus_tag=LDO50_RS09915;partial=true;product=type II secretion system F family protein;protein_id=WP_224019660.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000081.1 RefSeq gene 799 1710 . + . ID=gene-LDO50_RS09920;Name=LDO50_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09920;old_locus_tag=BVI1335_1710002 NZ_CAJZAO010000081.1 Protein Homology CDS 799 1710 . + 0 ID=cds-WP_011883192.1;Parent=gene-LDO50_RS09920;Dbxref=GenBank:WP_011883192.1;Name=WP_011883192.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883192.1;locus_tag=LDO50_RS09920;product=prepilin peptidase;protein_id=WP_011883192.1;transl_table=11 NZ_CAJZAO010000081.1 RefSeq gene 1801 2409 . + . ID=gene-LDO50_RS09925;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=LDO50_RS09925;old_locus_tag=BVI1335_1710003 NZ_CAJZAO010000081.1 Protein Homology CDS 1801 2409 . + 0 ID=cds-WP_034194193.1;Parent=gene-LDO50_RS09925;Dbxref=GenBank:WP_034194193.1;Name=WP_034194193.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487123.1;locus_tag=LDO50_RS09925;product=dephospho-CoA kinase;protein_id=WP_034194193.1;transl_table=11 NZ_CAJZAO010000081.1 RefSeq gene 2519 3274 . + . ID=gene-LDO50_RS09930;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=LDO50_RS09930;old_locus_tag=BVI1335_1710005 NZ_CAJZAO010000081.1 Protein Homology CDS 2519 3274 . + 0 ID=cds-WP_011883190.1;Parent=gene-LDO50_RS09930;Dbxref=GenBank:WP_011883190.1;Name=WP_011883190.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756831.1;locus_tag=LDO50_RS09930;product=cell division protein ZapD;protein_id=WP_011883190.1;transl_table=11 NZ_CAJZAO010000081.1 RefSeq gene 3303 3503 . + . ID=gene-LDO50_RS09935;Name=LDO50_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09935 NZ_CAJZAO010000081.1 Protein Homology CDS 3303 3503 . + 0 ID=cds-WP_011883189.1;Parent=gene-LDO50_RS09935;Dbxref=GenBank:WP_011883189.1;Name=WP_011883189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883189.1;locus_tag=LDO50_RS09935;product=DNA gyrase inhibitor YacG;protein_id=WP_011883189.1;transl_table=11 NZ_CAJZAO010000081.1 RefSeq gene 3569 4027 . - . ID=gene-LDO50_RS09940;Name=LDO50_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09940;old_locus_tag=BVI1335_1710006 NZ_CAJZAO010000081.1 Protein Homology CDS 3569 4027 . - 0 ID=cds-WP_011883188.1;Parent=gene-LDO50_RS09940;Dbxref=GenBank:WP_011883188.1;Name=WP_011883188.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883188.1;locus_tag=LDO50_RS09940;product=NUDIX domain-containing protein;protein_id=WP_011883188.1;transl_table=11 NZ_CAJZAO010000081.1 RefSeq gene 4024 4893 . - . ID=gene-LDO50_RS09945;Name=LDO50_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09945;old_locus_tag=BVI1335_1710007 NZ_CAJZAO010000081.1 Protein Homology CDS 4024 4893 . - 0 ID=cds-WP_069263287.1;Parent=gene-LDO50_RS09945;Dbxref=GenBank:WP_069263287.1;Name=WP_069263287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350849.1;locus_tag=LDO50_RS09945;product=ATP-binding protein;protein_id=WP_069263287.1;transl_table=11 NZ_CAJZAO010000081.1 RefSeq gene 4913 6154 . - . ID=gene-LDO50_RS09950;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;locus_tag=LDO50_RS09950;old_locus_tag=BVI1335_1710008 NZ_CAJZAO010000081.1 Protein Homology CDS 4913 6154 . - 0 ID=cds-WP_034194186.1;Parent=gene-LDO50_RS09950;Dbxref=GenBank:WP_034194186.1;Name=WP_034194186.1;Ontology_term=GO:0006526,GO:0004358;gbkey=CDS;gene=argJ;go_function=L-glutamate N-acetyltransferase activity%2C acting on acetyl-L-ornithine as donor|0004358||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333474.1;locus_tag=LDO50_RS09950;product=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;protein_id=WP_034194186.1;transl_table=11 NZ_CAJZAO010000081.1 RefSeq gene 6298 9090 . - . ID=gene-LDO50_RS09955;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=LDO50_RS09955;old_locus_tag=BVI1335_1710009 NZ_CAJZAO010000081.1 Protein Homology CDS 6298 9090 . - 0 ID=cds-WP_014722396.1;Parent=gene-LDO50_RS09955;Dbxref=GenBank:WP_014722396.1;Name=WP_014722396.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544506.1;locus_tag=LDO50_RS09955;product=preprotein translocase subunit SecA;protein_id=WP_014722396.1;transl_table=11 NZ_CAJZAO010000081.1 RefSeq gene 9360 9839 . + . ID=gene-LDO50_RS09960;Name=LDO50_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09960;old_locus_tag=BVI1335_1710010 NZ_CAJZAO010000081.1 Protein Homology CDS 9360 9839 . + 0 ID=cds-WP_011883184.1;Parent=gene-LDO50_RS09960;Dbxref=GenBank:WP_011883184.1;Name=WP_011883184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025158.1;locus_tag=LDO50_RS09960;product=DUF721 domain-containing protein;protein_id=WP_011883184.1;transl_table=11 NZ_CAJZAO010000081.1 RefSeq gene 9918 10835 . - . ID=gene-LDO50_RS09965;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=LDO50_RS09965;old_locus_tag=BVI1335_1710011 NZ_CAJZAO010000081.1 Protein Homology CDS 9918 10835 . - 0 ID=cds-WP_011883183.1;Parent=gene-LDO50_RS09965;Dbxref=GenBank:WP_011883183.1;Name=WP_011883183.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106607.1;locus_tag=LDO50_RS09965;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_011883183.1;transl_table=11 NZ_CAJZAO010000081.1 RefSeq gene 11076 11582 . - . ID=gene-LDO50_RS09970;Name=LDO50_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09970;old_locus_tag=BVI1335_1710012 NZ_CAJZAO010000081.1 Protein Homology CDS 11076 11582 . - 0 ID=cds-WP_014722392.1;Parent=gene-LDO50_RS09970;Dbxref=GenBank:WP_014722392.1;Name=WP_014722392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492974.1;locus_tag=LDO50_RS09970;product=peroxiredoxin;protein_id=WP_014722392.1;transl_table=11 NZ_CAJZAO010000081.1 RefSeq gene 11770 12966 . - . ID=gene-LDO50_RS09975;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=LDO50_RS09975;old_locus_tag=BVI1335_1710013 NZ_CAJZAO010000081.1 Protein Homology CDS 11770 12966 . - 0 ID=cds-WP_011883181.1;Parent=gene-LDO50_RS09975;Dbxref=GenBank:WP_011883181.1;Name=WP_011883181.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020071225.1;locus_tag=LDO50_RS09975;product=cell division protein FtsZ;protein_id=WP_011883181.1;transl_table=11 NZ_CAJZAO010000081.1 RefSeq gene 13078 14310 . - . ID=gene-LDO50_RS09980;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=LDO50_RS09980;old_locus_tag=BVI1335_1710014 NZ_CAJZAO010000081.1 Protein Homology CDS 13078 14310 . - 0 ID=cds-WP_006752447.1;Parent=gene-LDO50_RS09980;Dbxref=GenBank:WP_006752447.1;Name=WP_006752447.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898179.1;locus_tag=LDO50_RS09980;product=cell division protein FtsA;protein_id=WP_006752447.1;transl_table=11 NZ_CAJZAO010000081.1 RefSeq gene 14337 15089 . - . ID=gene-LDO50_RS09985;Name=LDO50_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09985;old_locus_tag=BVI1335_1710015 NZ_CAJZAO010000081.1 Protein Homology CDS 14337 15089 . - 0 ID=cds-WP_011883180.1;Parent=gene-LDO50_RS09985;Dbxref=GenBank:WP_011883180.1;Name=WP_011883180.1;Ontology_term=GO:0043093,GO:0051301;gbkey=CDS;go_process=FtsZ-dependent cytokinesis|0043093||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522020.1;locus_tag=LDO50_RS09985;product=cell division protein FtsQ/DivIB;protein_id=WP_011883180.1;transl_table=11 NZ_CAJZAO010000081.1 RefSeq gene 15109 16050 . - . ID=gene-LDO50_RS09990;Name=LDO50_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS09990;old_locus_tag=BVI1335_1710016 NZ_CAJZAO010000081.1 Protein Homology CDS 15109 16050 . - 0 ID=cds-WP_011883179.1;Parent=gene-LDO50_RS09990;Dbxref=GenBank:WP_011883179.1;Name=WP_011883179.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011489915.1;locus_tag=LDO50_RS09990;product=D-alanine--D-alanine ligase;protein_id=WP_011883179.1;transl_table=11 NZ_CAJZAO010000081.1 RefSeq gene 16052 17449 . - . ID=gene-LDO50_RS09995;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=LDO50_RS09995;old_locus_tag=BVI1335_1710017 NZ_CAJZAO010000081.1 Protein Homology CDS 16052 17449 . - 0 ID=cds-WP_011883178.1;Parent=gene-LDO50_RS09995;Dbxref=GenBank:WP_011883178.1;Name=WP_011883178.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009903890.1;locus_tag=LDO50_RS09995;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_011883178.1;transl_table=11 NZ_CAJZAO010000081.1 RefSeq gene 17446 18549 . - . ID=gene-LDO50_RS10000;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=LDO50_RS10000;old_locus_tag=BVI1335_1710018 NZ_CAJZAO010000081.1 Protein Homology CDS 17446 18549 . - 0 ID=cds-WP_011883177.1;Parent=gene-LDO50_RS10000;Dbxref=GenBank:WP_011883177.1;Name=WP_011883177.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004541310.1;locus_tag=LDO50_RS10000;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_011883177.1;transl_table=11 NZ_CAJZAO010000081.1 RefSeq gene 18671 19916 . - . ID=gene-LDO50_RS10005;Name=ftsW;end_range=19916,.;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=LDO50_RS10005;old_locus_tag=BVI1335_1710019;partial=true NZ_CAJZAO010000081.1 Protein Homology CDS 18671 19916 . - 1 ID=cds-WP_224019661.1;Parent=gene-LDO50_RS10005;Dbxref=GenBank:WP_224019661.1;Name=WP_224019661.1;Ontology_term=GO:0009252,GO:0051301,GO:0016020;end_range=19916,.;gbkey=CDS;gene=ftsW;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883176.1;locus_tag=LDO50_RS10005;partial=true;product=putative lipid II flippase FtsW;protein_id=WP_224019661.1;transl_table=11 ##sequence-region NZ_CAJZAO010000082.1 1 13052 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000082.1 RefSeq region 1 13052 . + . ID=NZ_CAJZAO010000082.1:1..13052;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_172 NZ_CAJZAO010000082.1 RefSeq gene 411 1373 . + . ID=gene-LDO50_RS10010;Name=LDO50_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10010;old_locus_tag=BVI1335_1720003 NZ_CAJZAO010000082.1 Protein Homology CDS 411 1373 . + 0 ID=cds-WP_014723717.1;Parent=gene-LDO50_RS10010;Dbxref=GenBank:WP_014723717.1;Name=WP_014723717.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353323.1;locus_tag=LDO50_RS10010;product=LysR family transcriptional regulator;protein_id=WP_014723717.1;transl_table=11 NZ_CAJZAO010000082.1 RefSeq gene 1616 3508 . + . ID=gene-LDO50_RS10015;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=LDO50_RS10015;old_locus_tag=BVI1335_1720004 NZ_CAJZAO010000082.1 Protein Homology CDS 1616 3508 . + 0 ID=cds-WP_069224351.1;Parent=gene-LDO50_RS10015;Dbxref=GenBank:WP_069224351.1;Name=WP_069224351.1;Ontology_term=GO:0006750,GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione biosynthetic process|0006750||IEA,glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477697.1;locus_tag=LDO50_RS10015;product=gamma-glutamyltransferase;protein_id=WP_069224351.1;transl_table=11 NZ_CAJZAO010000082.1 RefSeq gene 3569 4300 . - . ID=gene-LDO50_RS10020;Name=LDO50_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10020;old_locus_tag=BVI1335_1720005 NZ_CAJZAO010000082.1 Protein Homology CDS 3569 4300 . - 0 ID=cds-WP_224019662.1;Parent=gene-LDO50_RS10020;Dbxref=GenBank:WP_224019662.1;Name=WP_224019662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886133.1;locus_tag=LDO50_RS10020;product=UPF0149 family protein;protein_id=WP_224019662.1;transl_table=11 NZ_CAJZAO010000082.1 RefSeq gene 4394 5344 . - . ID=gene-LDO50_RS10025;Name=LDO50_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10025;old_locus_tag=BVI1335_1720006 NZ_CAJZAO010000082.1 Protein Homology CDS 4394 5344 . - 0 ID=cds-WP_059475383.1;Parent=gene-LDO50_RS10025;Dbxref=GenBank:WP_059475383.1;Name=WP_059475383.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895924.1;locus_tag=LDO50_RS10025;product=ABC transporter permease subunit;protein_id=WP_059475383.1;transl_table=11 NZ_CAJZAO010000082.1 RefSeq gene 5344 6141 . - . ID=gene-LDO50_RS10030;Name=LDO50_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10030;old_locus_tag=BVI1335_1720007 NZ_CAJZAO010000082.1 Protein Homology CDS 5344 6141 . - 0 ID=cds-WP_011886135.1;Parent=gene-LDO50_RS10030;Dbxref=GenBank:WP_011886135.1;Name=WP_011886135.1;Ontology_term=GO:0015734,GO:0005524,GO:0015411,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type taurine transporter transporter activity|0015411||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=taurine transmembrane transport|0015734||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412682.1;locus_tag=LDO50_RS10030;product=taurine ABC transporter ATP-binding protein;protein_id=WP_011886135.1;transl_table=11 NZ_CAJZAO010000082.1 RefSeq gene 6181 7197 . - . ID=gene-LDO50_RS10035;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=LDO50_RS10035;old_locus_tag=BVI1335_1720008 NZ_CAJZAO010000082.1 Protein Homology CDS 6181 7197 . - 0 ID=cds-WP_011886136.1;Parent=gene-LDO50_RS10035;Dbxref=GenBank:WP_011886136.1;Name=WP_011886136.1;Ontology_term=GO:0015734,GO:0015411,GO:0030977,GO:0042597,GO:0055052;gbkey=CDS;gene=tauA;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA,taurine binding|0030977||IEA;go_process=taurine transmembrane transport|0015734||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763294.1;locus_tag=LDO50_RS10035;product=taurine ABC transporter substrate-binding protein;protein_id=WP_011886136.1;transl_table=11 NZ_CAJZAO010000082.1 RefSeq gene 7481 8473 . - . ID=gene-LDO50_RS10040;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=LDO50_RS10040;old_locus_tag=BVI1335_1720009 NZ_CAJZAO010000082.1 Protein Homology CDS 7481 8473 . - 0 ID=cds-WP_011886137.1;Parent=gene-LDO50_RS10040;Dbxref=GenBank:WP_011886137.1;Name=WP_011886137.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601526.1;locus_tag=LDO50_RS10040;product=lipoyl synthase;protein_id=WP_011886137.1;transl_table=11 NZ_CAJZAO010000082.1 RefSeq gene 8466 9221 . - . ID=gene-LDO50_RS10045;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=LDO50_RS10045;old_locus_tag=BVI1335_1720010 NZ_CAJZAO010000082.1 Protein Homology CDS 8466 9221 . - 0 ID=cds-WP_011886138.1;Parent=gene-LDO50_RS10045;Dbxref=GenBank:WP_011886138.1;Name=WP_011886138.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364793.1;locus_tag=LDO50_RS10045;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_011886138.1;transl_table=11 NZ_CAJZAO010000082.1 RefSeq gene 9305 9631 . - . ID=gene-LDO50_RS10050;Name=LDO50_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10050;old_locus_tag=BVI1335_1720011 NZ_CAJZAO010000082.1 Protein Homology CDS 9305 9631 . - 0 ID=cds-WP_034192576.1;Parent=gene-LDO50_RS10050;Dbxref=GenBank:WP_034192576.1;Name=WP_034192576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546304.1;locus_tag=LDO50_RS10050;product=DUF2917 domain-containing protein;protein_id=WP_034192576.1;transl_table=11 NZ_CAJZAO010000082.1 RefSeq gene 9734 10705 . + . ID=gene-LDO50_RS10055;Name=LDO50_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10055;old_locus_tag=BVI1335_1720012 NZ_CAJZAO010000082.1 Protein Homology CDS 9734 10705 . + 0 ID=cds-WP_011886140.1;Parent=gene-LDO50_RS10055;Dbxref=GenBank:WP_011886140.1;Name=WP_011886140.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886140.1;locus_tag=LDO50_RS10055;product=transcriptional regulator GcvA;protein_id=WP_011886140.1;transl_table=11 NZ_CAJZAO010000082.1 RefSeq gene 10737 11045 . - . ID=gene-LDO50_RS10060;Name=LDO50_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10060;old_locus_tag=BVI1335_1720013 NZ_CAJZAO010000082.1 Protein Homology CDS 10737 11045 . - 0 ID=cds-WP_011886141.1;Parent=gene-LDO50_RS10060;Dbxref=GenBank:WP_011886141.1;Name=WP_011886141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601869.1;locus_tag=LDO50_RS10060;product=HP0495 family protein;protein_id=WP_011886141.1;transl_table=11 NZ_CAJZAO010000082.1 RefSeq gene 11045 11971 . - . ID=gene-LDO50_RS10065;Name=LDO50_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10065;old_locus_tag=BVI1335_1720014 NZ_CAJZAO010000082.1 Protein Homology CDS 11045 11971 . - 0 ID=cds-WP_045578747.1;Parent=gene-LDO50_RS10065;Dbxref=GenBank:WP_045578747.1;Name=WP_045578747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886142.1;locus_tag=LDO50_RS10065;product=D-amino acid aminotransferase;protein_id=WP_045578747.1;transl_table=11 NZ_CAJZAO010000082.1 RefSeq gene 12020 12818 . - . ID=gene-LDO50_RS10070;Name=LDO50_RS10070;end_range=12818,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10070;old_locus_tag=BVI1335_1720015;partial=true NZ_CAJZAO010000082.1 Protein Homology CDS 12020 12818 . - 1 ID=cds-WP_443797758.1;Parent=gene-LDO50_RS10070;Dbxref=GenBank:WP_443797758.1;Name=WP_443797758.1;Ontology_term=GO:0006508,GO:0008236;end_range=12818,.;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534083.1;locus_tag=LDO50_RS10070;partial=true;product=D-alanyl-D-alanine carboxypeptidase family protein;protein_id=WP_443797758.1;transl_table=11 NZ_CAJZAO010000082.1 RefSeq gene 12829 13052 . - . ID=gene-LDO50_RS31435;Name=LDO50_RS31435;end_range=13052,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31435;old_locus_tag=BVI1335_1720016;partial=true;start_range=.,12829 NZ_CAJZAO010000082.1 Protein Homology CDS 12829 13052 . - 1 ID=cds-WP_443797759.1;Parent=gene-LDO50_RS31435;Dbxref=GenBank:WP_443797759.1;Name=WP_443797759.1;Ontology_term=GO:0030655,GO:0008800;end_range=13052,.;gbkey=CDS;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090548.1;locus_tag=LDO50_RS31435;partial=true;product=serine hydrolase;protein_id=WP_443797759.1;start_range=.,12829;transl_table=11 ##sequence-region NZ_CAJZAO010000083.1 1 10531 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000083.1 RefSeq region 1 10531 . + . ID=NZ_CAJZAO010000083.1:1..10531;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_173 NZ_CAJZAO010000083.1 RefSeq gene 1 1600 . + . ID=gene-LDO50_RS10075;Name=LDO50_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10075;old_locus_tag=BVI1335_1730001;partial=true;start_range=.,1 NZ_CAJZAO010000083.1 Protein Homology CDS 1 1600 . + 1 ID=cds-WP_224019663.1;Parent=gene-LDO50_RS10075;Dbxref=GenBank:WP_224019663.1;Name=WP_224019663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011807655.1;locus_tag=LDO50_RS10075;partial=true;product=D-(-)-3-hydroxybutyrate oligomer hydrolase;protein_id=WP_224019663.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000083.1 RefSeq gene 2208 4043 . + . ID=gene-LDO50_RS10080;Name=LDO50_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10080;old_locus_tag=BVI1335_1730004 NZ_CAJZAO010000083.1 Protein Homology CDS 2208 4043 . + 0 ID=cds-WP_059462537.1;Parent=gene-LDO50_RS10080;Dbxref=GenBank:WP_059462537.1;Name=WP_059462537.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185580.1;locus_tag=LDO50_RS10080;product=S10 family peptidase;protein_id=WP_059462537.1;transl_table=11 NZ_CAJZAO010000083.1 RefSeq gene 4214 5002 . - . ID=gene-LDO50_RS10085;Name=LDO50_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10085;old_locus_tag=BVI1335_1730005 NZ_CAJZAO010000083.1 Protein Homology CDS 4214 5002 . - 0 ID=cds-WP_011883481.1;Parent=gene-LDO50_RS10085;Dbxref=GenBank:WP_011883481.1;Name=WP_011883481.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544716.1;locus_tag=LDO50_RS10085;product=sulfite exporter TauE/SafE family protein;protein_id=WP_011883481.1;transl_table=11 NZ_CAJZAO010000083.1 RefSeq gene 5288 6727 . - . ID=gene-LDO50_RS10090;Name=LDO50_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10090;old_locus_tag=BVI1335_1730006 NZ_CAJZAO010000083.1 Protein Homology CDS 5288 6727 . - 0 ID=cds-WP_224019664.1;Parent=gene-LDO50_RS10090;Dbxref=GenBank:WP_224019664.1;Name=WP_224019664.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889464.1;locus_tag=LDO50_RS10090;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_224019664.1;transl_table=11 NZ_CAJZAO010000083.1 RefSeq gene 6840 7574 . - . ID=gene-LDO50_RS10095;Name=LDO50_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10095;old_locus_tag=BVI1335_1730007 NZ_CAJZAO010000083.1 Protein Homology CDS 6840 7574 . - 0 ID=cds-WP_224019665.1;Parent=gene-LDO50_RS10095;Dbxref=GenBank:WP_224019665.1;Name=WP_224019665.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544718.1;locus_tag=LDO50_RS10095;product=DsbA family oxidoreductase;protein_id=WP_224019665.1;transl_table=11 NZ_CAJZAO010000083.1 RefSeq gene 7721 8368 . - . ID=gene-LDO50_RS10100;Name=LDO50_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10100;old_locus_tag=BVI1335_1730008 NZ_CAJZAO010000083.1 Protein Homology CDS 7721 8368 . - 0 ID=cds-WP_046426278.1;Parent=gene-LDO50_RS10100;Dbxref=GenBank:WP_046426278.1;Name=WP_046426278.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091537.1;locus_tag=LDO50_RS10100;product=helix-turn-helix transcriptional regulator;protein_id=WP_046426278.1;transl_table=11 NZ_CAJZAO010000083.1 RefSeq gene 9072 10531 . + . ID=gene-LDO50_RS10105;Name=LDO50_RS10105;end_range=10531,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10105;partial=true NZ_CAJZAO010000083.1 Protein Homology CDS 9072 10531 . + 0 ID=cds-WP_372586089.1;Parent=gene-LDO50_RS10105;Dbxref=GenBank:WP_372586089.1;Name=WP_372586089.1;end_range=10531,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333349.1;locus_tag=LDO50_RS10105;partial=true;product=beta strand repeat-containing protein;protein_id=WP_372586089.1;transl_table=11 ##sequence-region NZ_CAJZAO010000084.1 1 29537 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000084.1 RefSeq region 1 29537 . + . ID=NZ_CAJZAO010000084.1:1..29537;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_174 NZ_CAJZAO010000084.1 RefSeq pseudogene 1 338 . + . ID=gene-LDO50_RS10110;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=LDO50_RS10110;old_locus_tag=BVI1335_1740001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000084.1 Protein Homology CDS 1 338 . + 2 ID=cds-LDO50_RS10110;Parent=gene-LDO50_RS10110;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012081251.1;locus_tag=LDO50_RS10110;partial=true;product=elongation factor Tu;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 620 931 . + . ID=gene-LDO50_RS10115;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=LDO50_RS10115;old_locus_tag=BVI1335_1740002 NZ_CAJZAO010000084.1 Protein Homology CDS 620 931 . + 0 ID=cds-WP_004199280.1;Parent=gene-LDO50_RS10115;Dbxref=GenBank:WP_004199280.1;Name=WP_004199280.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199280.1;locus_tag=LDO50_RS10115;product=30S ribosomal protein S10;protein_id=WP_004199280.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 1110 1760 . + . ID=gene-LDO50_RS10120;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=LDO50_RS10120;old_locus_tag=BVI1335_1740003 NZ_CAJZAO010000084.1 Protein Homology CDS 1110 1760 . + 0 ID=cds-WP_006752926.1;Parent=gene-LDO50_RS10120;Dbxref=GenBank:WP_006752926.1;Name=WP_006752926.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212557.1;locus_tag=LDO50_RS10120;product=50S ribosomal protein L3;protein_id=WP_006752926.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 1760 2380 . + . ID=gene-LDO50_RS10125;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=LDO50_RS10125;old_locus_tag=BVI1335_1740004 NZ_CAJZAO010000084.1 Protein Homology CDS 1760 2380 . + 0 ID=cds-WP_006477192.1;Parent=gene-LDO50_RS10125;Dbxref=GenBank:WP_006477192.1;Name=WP_006477192.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350675.1;locus_tag=LDO50_RS10125;product=50S ribosomal protein L4;protein_id=WP_006477192.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 2377 2691 . + . ID=gene-LDO50_RS10130;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=LDO50_RS10130;old_locus_tag=BVI1335_1740005 NZ_CAJZAO010000084.1 Protein Homology CDS 2377 2691 . + 0 ID=cds-WP_004199275.1;Parent=gene-LDO50_RS10130;Dbxref=GenBank:WP_004199275.1;Name=WP_004199275.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008343846.1;locus_tag=LDO50_RS10130;product=50S ribosomal protein L23;protein_id=WP_004199275.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 2694 3521 . + . ID=gene-LDO50_RS10135;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=LDO50_RS10135;old_locus_tag=BVI1335_1740006 NZ_CAJZAO010000084.1 Protein Homology CDS 2694 3521 . + 0 ID=cds-WP_011883004.1;Parent=gene-LDO50_RS10135;Dbxref=GenBank:WP_011883004.1;Name=WP_011883004.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009770933.1;locus_tag=LDO50_RS10135;product=50S ribosomal protein L2;protein_id=WP_011883004.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 3532 3807 . + . ID=gene-LDO50_RS10140;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=LDO50_RS10140;old_locus_tag=BVI1335_1740007 NZ_CAJZAO010000084.1 Protein Homology CDS 3532 3807 . + 0 ID=cds-WP_004199273.1;Parent=gene-LDO50_RS10140;Dbxref=GenBank:WP_004199273.1;Name=WP_004199273.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440478.1;locus_tag=LDO50_RS10140;product=30S ribosomal protein S19;protein_id=WP_004199273.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 3820 4149 . + . ID=gene-LDO50_RS10145;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=LDO50_RS10145;old_locus_tag=BVI1335_1740008 NZ_CAJZAO010000084.1 Protein Homology CDS 3820 4149 . + 0 ID=cds-WP_004199272.1;Parent=gene-LDO50_RS10145;Dbxref=GenBank:WP_004199272.1;Name=WP_004199272.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018420150.1;locus_tag=LDO50_RS10145;product=50S ribosomal protein L22;protein_id=WP_004199272.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 4161 4961 . + . ID=gene-LDO50_RS10150;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=LDO50_RS10150;old_locus_tag=BVI1335_1740009 NZ_CAJZAO010000084.1 Protein Homology CDS 4161 4961 . + 0 ID=cds-WP_006482899.1;Parent=gene-LDO50_RS10150;Dbxref=GenBank:WP_006482899.1;Name=WP_006482899.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185240.1;locus_tag=LDO50_RS10150;product=30S ribosomal protein S3;protein_id=WP_006482899.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 4964 5380 . + . ID=gene-LDO50_RS10155;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=LDO50_RS10155;old_locus_tag=BVI1335_1740010 NZ_CAJZAO010000084.1 Protein Homology CDS 4964 5380 . + 0 ID=cds-WP_006482873.1;Parent=gene-LDO50_RS10155;Dbxref=GenBank:WP_006482873.1;Name=WP_006482873.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013340739.1;locus_tag=LDO50_RS10155;product=50S ribosomal protein L16;protein_id=WP_006482873.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 5390 5584 . + . ID=gene-LDO50_RS10160;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=LDO50_RS10160;old_locus_tag=BVI1335_1740011 NZ_CAJZAO010000084.1 Protein Homology CDS 5390 5584 . + 0 ID=cds-WP_006400652.1;Parent=gene-LDO50_RS10160;Dbxref=GenBank:WP_006400652.1;Name=WP_006400652.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199856.1;locus_tag=LDO50_RS10160;product=50S ribosomal protein L29;protein_id=WP_006400652.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 5581 5853 . + . ID=gene-LDO50_RS10165;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=LDO50_RS10165;old_locus_tag=BVI1335_1740012 NZ_CAJZAO010000084.1 Protein Homology CDS 5581 5853 . + 0 ID=cds-WP_006752928.1;Parent=gene-LDO50_RS10165;Dbxref=GenBank:WP_006752928.1;Name=WP_006752928.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006998479.1;locus_tag=LDO50_RS10165;product=30S ribosomal protein S17;protein_id=WP_006752928.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 6163 6531 . + . ID=gene-LDO50_RS10170;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=LDO50_RS10170;old_locus_tag=BVI1335_1740013 NZ_CAJZAO010000084.1 Protein Homology CDS 6163 6531 . + 0 ID=cds-WP_006752929.1;Parent=gene-LDO50_RS10170;Dbxref=GenBank:WP_006752929.1;Name=WP_006752929.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009124801.1;locus_tag=LDO50_RS10170;product=50S ribosomal protein L14;protein_id=WP_006752929.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 6541 6849 . + . ID=gene-LDO50_RS10175;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=LDO50_RS10175;old_locus_tag=BVI1335_1740014 NZ_CAJZAO010000084.1 Protein Homology CDS 6541 6849 . + 0 ID=cds-WP_006477187.1;Parent=gene-LDO50_RS10175;Dbxref=GenBank:WP_006477187.1;Name=WP_006477187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197950.1;locus_tag=LDO50_RS10175;product=50S ribosomal protein L24;protein_id=WP_006477187.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 6866 7405 . + . ID=gene-LDO50_RS10180;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=LDO50_RS10180;old_locus_tag=BVI1335_1740015 NZ_CAJZAO010000084.1 Protein Homology CDS 6866 7405 . + 0 ID=cds-WP_011883005.1;Parent=gene-LDO50_RS10180;Dbxref=GenBank:WP_011883005.1;Name=WP_011883005.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007875323.1;locus_tag=LDO50_RS10180;product=50S ribosomal protein L5;protein_id=WP_011883005.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 7413 7718 . + . ID=gene-LDO50_RS10185;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=LDO50_RS10185;old_locus_tag=BVI1335_1740016 NZ_CAJZAO010000084.1 Protein Homology CDS 7413 7718 . + 0 ID=cds-WP_011883006.1;Parent=gene-LDO50_RS10185;Dbxref=GenBank:WP_011883006.1;Name=WP_011883006.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197948.1;locus_tag=LDO50_RS10185;product=30S ribosomal protein S14;protein_id=WP_011883006.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 7733 8128 . + . ID=gene-LDO50_RS10190;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=LDO50_RS10190;old_locus_tag=BVI1335_1740017 NZ_CAJZAO010000084.1 Protein Homology CDS 7733 8128 . + 0 ID=cds-WP_006477185.1;Parent=gene-LDO50_RS10190;Dbxref=GenBank:WP_006477185.1;Name=WP_006477185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011799763.1;locus_tag=LDO50_RS10190;product=30S ribosomal protein S8;protein_id=WP_006477185.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 8147 8677 . + . ID=gene-LDO50_RS10195;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=LDO50_RS10195;old_locus_tag=BVI1335_1740018 NZ_CAJZAO010000084.1 Protein Homology CDS 8147 8677 . + 0 ID=cds-WP_011883007.1;Parent=gene-LDO50_RS10195;Dbxref=GenBank:WP_011883007.1;Name=WP_011883007.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734367.1;locus_tag=LDO50_RS10195;product=50S ribosomal protein L6;protein_id=WP_011883007.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 8690 9055 . + . ID=gene-LDO50_RS10200;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=LDO50_RS10200;old_locus_tag=BVI1335_1740019 NZ_CAJZAO010000084.1 Protein Homology CDS 8690 9055 . + 0 ID=cds-WP_006477183.1;Parent=gene-LDO50_RS10200;Dbxref=GenBank:WP_006477183.1;Name=WP_006477183.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013434799.1;locus_tag=LDO50_RS10200;product=50S ribosomal protein L18;protein_id=WP_006477183.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 9071 9589 . + . ID=gene-LDO50_RS10205;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=LDO50_RS10205;old_locus_tag=BVI1335_1740020 NZ_CAJZAO010000084.1 Protein Homology CDS 9071 9589 . + 0 ID=cds-WP_006752931.1;Parent=gene-LDO50_RS10205;Dbxref=GenBank:WP_006752931.1;Name=WP_006752931.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011002906.1;locus_tag=LDO50_RS10205;product=30S ribosomal protein S5;protein_id=WP_006752931.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 9605 9787 . + . ID=gene-LDO50_RS10210;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=LDO50_RS10210;old_locus_tag=BVI1335_1740021 NZ_CAJZAO010000084.1 Protein Homology CDS 9605 9787 . + 0 ID=cds-WP_006400644.1;Parent=gene-LDO50_RS10210;Dbxref=GenBank:WP_006400644.1;Name=WP_006400644.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006998470.1;locus_tag=LDO50_RS10210;product=50S ribosomal protein L30;protein_id=WP_006400644.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 9814 10248 . + . ID=gene-LDO50_RS10215;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=LDO50_RS10215;old_locus_tag=BVI1335_1740022 NZ_CAJZAO010000084.1 Protein Homology CDS 9814 10248 . + 0 ID=cds-WP_006482880.1;Parent=gene-LDO50_RS10215;Dbxref=GenBank:WP_006482880.1;Name=WP_006482880.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197941.1;locus_tag=LDO50_RS10215;product=50S ribosomal protein L15;protein_id=WP_006482880.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 10291 11640 . + . ID=gene-LDO50_RS10220;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=LDO50_RS10220;old_locus_tag=BVI1335_1740023 NZ_CAJZAO010000084.1 Protein Homology CDS 10291 11640 . + 0 ID=cds-WP_006400642.1;Parent=gene-LDO50_RS10220;Dbxref=GenBank:WP_006400642.1;Name=WP_006400642.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440464.1;locus_tag=LDO50_RS10220;product=preprotein translocase subunit SecY;protein_id=WP_006400642.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 11650 11868 . + . ID=gene-LDO50_RS10225;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=LDO50_RS10225;old_locus_tag=BVI1335_1740024 NZ_CAJZAO010000084.1 Protein Homology CDS 11650 11868 . + 0 ID=cds-WP_004521905.1;Parent=gene-LDO50_RS10225;Dbxref=GenBank:WP_004521905.1;Name=WP_004521905.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018149800.1;locus_tag=LDO50_RS10225;product=translation initiation factor IF-1;protein_id=WP_004521905.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 11889 12005 . + . ID=gene-LDO50_RS10230;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=LDO50_RS10230 NZ_CAJZAO010000084.1 Protein Homology CDS 11889 12005 . + 0 ID=cds-WP_004199844.1;Parent=gene-LDO50_RS10230;Dbxref=GenBank:WP_004199844.1;Name=WP_004199844.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006232360.1;locus_tag=LDO50_RS10230;product=50S ribosomal protein L36;protein_id=WP_004199844.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 12044 12409 . + . ID=gene-LDO50_RS10235;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=LDO50_RS10235;old_locus_tag=BVI1335_1740025 NZ_CAJZAO010000084.1 Protein Homology CDS 12044 12409 . + 0 ID=cds-WP_006752933.1;Parent=gene-LDO50_RS10235;Dbxref=GenBank:WP_006752933.1;Name=WP_006752933.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440462.1;locus_tag=LDO50_RS10235;product=30S ribosomal protein S13;protein_id=WP_006752933.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 12438 12839 . + . ID=gene-LDO50_RS10240;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=LDO50_RS10240;old_locus_tag=BVI1335_1740026 NZ_CAJZAO010000084.1 Protein Homology CDS 12438 12839 . + 0 ID=cds-WP_004197937.1;Parent=gene-LDO50_RS10240;Dbxref=GenBank:WP_004197937.1;Name=WP_004197937.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106947.1;locus_tag=LDO50_RS10240;product=30S ribosomal protein S11;protein_id=WP_004197937.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 12995 13618 . + . ID=gene-LDO50_RS10245;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=LDO50_RS10245;old_locus_tag=BVI1335_1740027 NZ_CAJZAO010000084.1 Protein Homology CDS 12995 13618 . + 0 ID=cds-WP_014722284.1;Parent=gene-LDO50_RS10245;Dbxref=GenBank:WP_014722284.1;Name=WP_014722284.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009888438.1;locus_tag=LDO50_RS10245;product=30S ribosomal protein S4;protein_id=WP_014722284.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 13743 14720 . + . ID=gene-LDO50_RS10250;Name=LDO50_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10250;old_locus_tag=BVI1335_1740028 NZ_CAJZAO010000084.1 Protein Homology CDS 13743 14720 . + 0 ID=cds-WP_006477176.1;Parent=gene-LDO50_RS10250;Dbxref=GenBank:WP_006477176.1;Name=WP_006477176.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440459.1;locus_tag=LDO50_RS10250;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_006477176.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 14869 15264 . + . ID=gene-LDO50_RS10255;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=LDO50_RS10255;old_locus_tag=BVI1335_1740029 NZ_CAJZAO010000084.1 Protein Homology CDS 14869 15264 . + 0 ID=cds-WP_006477175.1;Parent=gene-LDO50_RS10255;Dbxref=GenBank:WP_006477175.1;Name=WP_006477175.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477175.1;locus_tag=LDO50_RS10255;product=50S ribosomal protein L17;protein_id=WP_006477175.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 15464 15790 . + . ID=gene-LDO50_RS10260;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=LDO50_RS10260;old_locus_tag=BVI1335_1740031 NZ_CAJZAO010000084.1 Protein Homology CDS 15464 15790 . + 0 ID=cds-WP_011883009.1;Parent=gene-LDO50_RS10260;Dbxref=GenBank:WP_011883009.1;Name=WP_011883009.1;Ontology_term=GO:0010038;gbkey=CDS;gene=cutA;go_process=response to metal ion|0010038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199838.1;locus_tag=LDO50_RS10260;product=divalent-cation tolerance protein CutA;protein_id=WP_011883009.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 15783 17627 . + . ID=gene-LDO50_RS10265;Name=dsbD;gbkey=Gene;gene=dsbD;gene_biotype=protein_coding;locus_tag=LDO50_RS10265;old_locus_tag=BVI1335_1740032 NZ_CAJZAO010000084.1 Protein Homology CDS 15783 17627 . + 0 ID=cds-WP_059605974.1;Parent=gene-LDO50_RS10265;Dbxref=GenBank:WP_059605974.1;Name=WP_059605974.1;Ontology_term=GO:0047134;gbkey=CDS;gene=dsbD;go_function=protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327751.1;locus_tag=LDO50_RS10265;product=protein-disulfide reductase DsbD;protein_id=WP_059605974.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 17728 18726 . - . ID=gene-LDO50_RS10270;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=LDO50_RS10270;old_locus_tag=BVI1335_1740033 NZ_CAJZAO010000084.1 Protein Homology CDS 17728 18726 . - 0 ID=cds-WP_011883011.1;Parent=gene-LDO50_RS10270;Dbxref=GenBank:WP_011883011.1;Name=WP_011883011.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898350.1;locus_tag=LDO50_RS10270;product=porphobilinogen synthase;protein_id=WP_011883011.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 18981 19640 . - . ID=gene-LDO50_RS10275;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=LDO50_RS10275;old_locus_tag=BVI1335_1740034 NZ_CAJZAO010000084.1 Protein Homology CDS 18981 19640 . - 0 ID=cds-WP_059897029.1;Parent=gene-LDO50_RS10275;Dbxref=GenBank:WP_059897029.1;Name=WP_059897029.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350683.1;locus_tag=LDO50_RS10275;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_059897029.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 19858 20511 . + . ID=gene-LDO50_RS10280;Name=LDO50_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10280;old_locus_tag=BVI1335_1740035 NZ_CAJZAO010000084.1 Protein Homology CDS 19858 20511 . + 0 ID=cds-WP_034194011.1;Parent=gene-LDO50_RS10280;Dbxref=GenBank:WP_034194011.1;Name=WP_034194011.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492295.1;locus_tag=LDO50_RS10280;product=c-type cytochrome;protein_id=WP_034194011.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 20634 22850 . + . ID=gene-LDO50_RS10285;Name=LDO50_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10285;old_locus_tag=BVI1335_1740036 NZ_CAJZAO010000084.1 Protein Homology CDS 20634 22850 . + 0 ID=cds-WP_014722288.1;Parent=gene-LDO50_RS10285;Dbxref=GenBank:WP_014722288.1;Name=WP_014722288.1;Ontology_term=GO:0017004,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883014.1;locus_tag=LDO50_RS10285;product=cytochrome c biogenesis protein ResB;protein_id=WP_014722288.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 22855 24045 . + . ID=gene-LDO50_RS10290;Name=ccsB;gbkey=Gene;gene=ccsB;gene_biotype=protein_coding;locus_tag=LDO50_RS10290;old_locus_tag=BVI1335_1740037 NZ_CAJZAO010000084.1 Protein Homology CDS 22855 24045 . + 0 ID=cds-WP_011883015.1;Parent=gene-LDO50_RS10290;Dbxref=GenBank:WP_011883015.1;Name=WP_011883015.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsB;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655767.1;locus_tag=LDO50_RS10290;product=c-type cytochrome biogenesis protein CcsB;protein_id=WP_011883015.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 24205 25212 . + . ID=gene-LDO50_RS10295;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=LDO50_RS10295;old_locus_tag=BVI1335_1740038 NZ_CAJZAO010000084.1 Protein Homology CDS 24205 25212 . + 0 ID=cds-WP_224019666.1;Parent=gene-LDO50_RS10295;Dbxref=GenBank:WP_224019666.1;Name=WP_224019666.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009913838.1;locus_tag=LDO50_RS10295;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_224019666.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 25236 25928 . + . ID=gene-LDO50_RS10300;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=LDO50_RS10300;old_locus_tag=BVI1335_1740039 NZ_CAJZAO010000084.1 Protein Homology CDS 25236 25928 . + 0 ID=cds-WP_059888968.1;Parent=gene-LDO50_RS10300;Dbxref=GenBank:WP_059888968.1;Name=WP_059888968.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494453.1;locus_tag=LDO50_RS10300;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_059888968.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 26027 26308 . - . ID=gene-LDO50_RS10305;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=LDO50_RS10305;old_locus_tag=BVI1335_1740040 NZ_CAJZAO010000084.1 Protein Homology CDS 26027 26308 . - 0 ID=cds-WP_034194009.1;Parent=gene-LDO50_RS10305;Dbxref=GenBank:WP_034194009.1;Name=WP_034194009.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758797.1;locus_tag=LDO50_RS10305;product=LPS translocon maturation chaperone LptM;protein_id=WP_034194009.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 26345 26671 . + . ID=gene-LDO50_RS10310;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=LDO50_RS10310;old_locus_tag=BVI1335_1740041 NZ_CAJZAO010000084.1 Protein Homology CDS 26345 26671 . + 0 ID=cds-WP_011883019.1;Parent=gene-LDO50_RS10310;Dbxref=GenBank:WP_011883019.1;Name=WP_011883019.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196764.1;locus_tag=LDO50_RS10310;product=iron donor protein CyaY;protein_id=WP_011883019.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq gene 26745 29132 . - . ID=gene-LDO50_RS10315;Name=LDO50_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10315;old_locus_tag=BVI1335_1740042 NZ_CAJZAO010000084.1 Protein Homology CDS 26745 29132 . - 0 ID=cds-WP_124259943.1;Parent=gene-LDO50_RS10315;Dbxref=GenBank:WP_124259943.1;Name=WP_124259943.1;Ontology_term=GO:0006508,GO:0009252,GO:0008658,GO:0008955,GO:0009002;gbkey=CDS;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898342.1;locus_tag=LDO50_RS10315;product=penicillin-binding protein 1A;protein_id=WP_124259943.1;transl_table=11 NZ_CAJZAO010000084.1 RefSeq pseudogene 29359 29537 . + . ID=gene-LDO50_RS10320;Name=LDO50_RS10320;end_range=29537,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS10320;partial=true;pseudo=true NZ_CAJZAO010000084.1 Protein Homology CDS 29359 29537 . + 0 ID=cds-LDO50_RS10320;Parent=gene-LDO50_RS10320;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=29537,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546632.1;locus_tag=LDO50_RS10320;partial=true;product=competence protein ComA;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000085.1 1 25984 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000085.1 RefSeq region 1 25984 . + . ID=NZ_CAJZAO010000085.1:1..25984;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_175 NZ_CAJZAO010000085.1 RefSeq pseudogene 1 156 . - . ID=gene-LDO50_RS31440;Name=LDO50_RS31440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31440;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000085.1 Protein Homology CDS 1 156 . - 0 ID=cds-LDO50_RS31440;Parent=gene-LDO50_RS31440;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910053.1;locus_tag=LDO50_RS31440;partial=true;product=MFS transporter;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000085.1 RefSeq gene 351 1271 . + . ID=gene-LDO50_RS10330;Name=LDO50_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10330;old_locus_tag=BVI1335_1750002 NZ_CAJZAO010000085.1 Protein Homology CDS 351 1271 . + 0 ID=cds-WP_014722264.1;Parent=gene-LDO50_RS10330;Dbxref=GenBank:WP_014722264.1;Name=WP_014722264.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752473.1;locus_tag=LDO50_RS10330;product=LysR family transcriptional regulator;protein_id=WP_014722264.1;transl_table=11 NZ_CAJZAO010000085.1 RefSeq gene 1486 2319 . - . ID=gene-LDO50_RS10335;Name=LDO50_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10335;old_locus_tag=BVI1335_1750003 NZ_CAJZAO010000085.1 Protein Homology CDS 1486 2319 . - 0 ID=cds-WP_011882976.1;Parent=gene-LDO50_RS10335;Dbxref=GenBank:WP_011882976.1;Name=WP_011882976.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752472.1;locus_tag=LDO50_RS10335;product=OmpW/AlkL family protein;protein_id=WP_011882976.1;transl_table=11 NZ_CAJZAO010000085.1 RefSeq gene 2336 3577 . - . ID=gene-LDO50_RS10340;Name=LDO50_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10340;old_locus_tag=BVI1335_1750004 NZ_CAJZAO010000085.1 Protein Homology CDS 2336 3577 . - 0 ID=cds-WP_059476073.1;Parent=gene-LDO50_RS10340;Dbxref=GenBank:WP_059476073.1;Name=WP_059476073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762855.1;locus_tag=LDO50_RS10340;product=DUF2957 domain-containing protein;protein_id=WP_059476073.1;transl_table=11 NZ_CAJZAO010000085.1 RefSeq gene 3742 5160 . - . ID=gene-LDO50_RS10345;Name=LDO50_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10345;old_locus_tag=BVI1335_1750005 NZ_CAJZAO010000085.1 Protein Homology CDS 3742 5160 . - 0 ID=cds-WP_059568079.1;Parent=gene-LDO50_RS10345;Dbxref=GenBank:WP_059568079.1;Name=WP_059568079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655738.1;locus_tag=LDO50_RS10345;product=DUF2957 domain-containing protein;protein_id=WP_059568079.1;transl_table=11 NZ_CAJZAO010000085.1 RefSeq gene 5587 6537 . - . ID=gene-LDO50_RS10350;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=LDO50_RS10350;old_locus_tag=BVI1335_1750006 NZ_CAJZAO010000085.1 Protein Homology CDS 5587 6537 . - 0 ID=cds-WP_014722267.1;Parent=gene-LDO50_RS10350;Dbxref=GenBank:WP_014722267.1;Name=WP_014722267.1;Ontology_term=GO:0006526,GO:0003942,GO:0005737;gbkey=CDS;gene=argC;go_component=cytoplasm|0005737||IEA;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497427.1;locus_tag=LDO50_RS10350;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_014722267.1;transl_table=11 NZ_CAJZAO010000085.1 RefSeq gene 6723 7295 . - . ID=gene-LDO50_RS10355;Name=LDO50_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10355;old_locus_tag=BVI1335_1750007 NZ_CAJZAO010000085.1 Protein Homology CDS 6723 7295 . - 0 ID=cds-WP_011882980.1;Parent=gene-LDO50_RS10355;Dbxref=GenBank:WP_011882980.1;Name=WP_011882980.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722268.1;locus_tag=LDO50_RS10355;product=flavodoxin family protein;protein_id=WP_011882980.1;transl_table=11 NZ_CAJZAO010000085.1 RefSeq gene 7492 8097 . - . ID=gene-LDO50_RS10360;Name=LDO50_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10360;old_locus_tag=BVI1335_1750008 NZ_CAJZAO010000085.1 Protein Homology CDS 7492 8097 . - 0 ID=cds-WP_011882981.1;Parent=gene-LDO50_RS10360;Dbxref=GenBank:WP_011882981.1;Name=WP_011882981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895621.1;locus_tag=LDO50_RS10360;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_011882981.1;transl_table=11 NZ_CAJZAO010000085.1 RefSeq gene 8341 9027 . - . ID=gene-LDO50_RS10365;Name=LDO50_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10365;old_locus_tag=BVI1335_1750009 NZ_CAJZAO010000085.1 Protein Homology CDS 8341 9027 . - 0 ID=cds-WP_006752465.1;Parent=gene-LDO50_RS10365;Dbxref=GenBank:WP_006752465.1;Name=WP_006752465.1;Ontology_term=GO:0009116,GO:0004588;gbkey=CDS;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401311.1;locus_tag=LDO50_RS10365;product=orotate phosphoribosyltransferase;protein_id=WP_006752465.1;transl_table=11 NZ_CAJZAO010000085.1 RefSeq gene 9485 11755 . + . ID=gene-LDO50_RS10370;Name=LDO50_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10370;old_locus_tag=BVI1335_1750011 NZ_CAJZAO010000085.1 Protein Homology CDS 9485 11755 . + 0 ID=cds-WP_011882982.1;Parent=gene-LDO50_RS10370;Dbxref=GenBank:WP_011882982.1;Name=WP_011882982.1;Ontology_term=GO:0004470,GO:0004471,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023762.1;locus_tag=LDO50_RS10370;product=NADP-dependent malic enzyme;protein_id=WP_011882982.1;transl_table=11 NZ_CAJZAO010000085.1 RefSeq gene 11896 15486 . - . ID=gene-LDO50_RS10375;Name=LDO50_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10375;old_locus_tag=BVI1335_1750012 NZ_CAJZAO010000085.1 Protein Homology CDS 11896 15486 . - 0 ID=cds-WP_224019667.1;Parent=gene-LDO50_RS10375;Dbxref=GenBank:WP_224019667.1;Name=WP_224019667.1;Ontology_term=GO:0030976,GO:0043805,GO:0046872,GO:0051539;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA,indolepyruvate ferredoxin oxidoreductase activity|0043805||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895623.1;locus_tag=LDO50_RS10375;product=indolepyruvate ferredoxin oxidoreductase family protein;protein_id=WP_224019667.1;transl_table=11 NZ_CAJZAO010000085.1 RefSeq gene 15806 15997 . + . ID=gene-LDO50_RS10380;Name=LDO50_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10380;old_locus_tag=BVI1335_1750013 NZ_CAJZAO010000085.1 Protein Homology CDS 15806 15997 . + 0 ID=cds-WP_059568081.1;Parent=gene-LDO50_RS10380;Dbxref=GenBank:WP_059568081.1;Name=WP_059568081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401308.1;locus_tag=LDO50_RS10380;product=hypothetical protein;protein_id=WP_059568081.1;transl_table=11 NZ_CAJZAO010000085.1 RefSeq gene 16109 17206 . - . ID=gene-LDO50_RS10385;Name=hppD;gbkey=Gene;gene=hppD;gene_biotype=protein_coding;locus_tag=LDO50_RS10385;old_locus_tag=BVI1335_1750014 NZ_CAJZAO010000085.1 Protein Homology CDS 16109 17206 . - 0 ID=cds-WP_041493933.1;Parent=gene-LDO50_RS10385;Dbxref=GenBank:WP_041493933.1;Name=WP_041493933.1;Ontology_term=GO:0006559,GO:0006572,GO:0003868;gbkey=CDS;gene=hppD;go_function=4-hydroxyphenylpyruvate dioxygenase activity|0003868||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,L-tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497422.1;locus_tag=LDO50_RS10385;product=4-hydroxyphenylpyruvate dioxygenase;protein_id=WP_041493933.1;transl_table=11 NZ_CAJZAO010000085.1 RefSeq gene 17420 17944 . + . ID=gene-LDO50_RS10390;Name=LDO50_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10390;old_locus_tag=BVI1335_1750015 NZ_CAJZAO010000085.1 Protein Homology CDS 17420 17944 . + 0 ID=cds-WP_011882986.1;Parent=gene-LDO50_RS10390;Dbxref=GenBank:WP_011882986.1;Name=WP_011882986.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757887.1;locus_tag=LDO50_RS10390;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011882986.1;transl_table=11 NZ_CAJZAO010000085.1 RefSeq gene 18012 18659 . - . ID=gene-LDO50_RS10395;Name=LDO50_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10395;old_locus_tag=BVI1335_1750016 NZ_CAJZAO010000085.1 Protein Homology CDS 18012 18659 . - 0 ID=cds-WP_224019668.1;Parent=gene-LDO50_RS10395;Dbxref=GenBank:WP_224019668.1;Name=WP_224019668.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408711.1;locus_tag=LDO50_RS10395;product=GNAT family N-acetyltransferase;protein_id=WP_224019668.1;transl_table=11 NZ_CAJZAO010000085.1 RefSeq gene 18894 19499 . - . ID=gene-LDO50_RS10400;Name=LDO50_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10400;old_locus_tag=BVI1335_1750018 NZ_CAJZAO010000085.1 Protein Homology CDS 18894 19499 . - 0 ID=cds-WP_045578598.1;Parent=gene-LDO50_RS10400;Dbxref=GenBank:WP_045578598.1;Name=WP_045578598.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762847.1;locus_tag=LDO50_RS10400;product=TetR/AcrR family transcriptional regulator;protein_id=WP_045578598.1;transl_table=11 NZ_CAJZAO010000085.1 RefSeq gene 19541 20356 . - . ID=gene-LDO50_RS10405;Name=LDO50_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10405;old_locus_tag=BVI1335_1750019 NZ_CAJZAO010000085.1 Protein Homology CDS 19541 20356 . - 0 ID=cds-WP_059476071.1;Parent=gene-LDO50_RS10405;Dbxref=GenBank:WP_059476071.1;Name=WP_059476071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895627.1;locus_tag=LDO50_RS10405;product=DUF1835 domain-containing protein;protein_id=WP_059476071.1;transl_table=11 NZ_CAJZAO010000085.1 RefSeq gene 20486 21574 . - . ID=gene-LDO50_RS10410;Name=paaE;gbkey=Gene;gene=paaE;gene_biotype=protein_coding;locus_tag=LDO50_RS10410;old_locus_tag=BVI1335_1750020 NZ_CAJZAO010000085.1 Protein Homology CDS 20486 21574 . - 0 ID=cds-WP_011882990.1;Parent=gene-LDO50_RS10410;Dbxref=GenBank:WP_011882990.1;Name=WP_011882990.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaE;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255661.1;locus_tag=LDO50_RS10410;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaE;protein_id=WP_011882990.1;transl_table=11 NZ_CAJZAO010000085.1 RefSeq gene 21577 22146 . - . ID=gene-LDO50_RS10415;Name=paaD;gbkey=Gene;gene=paaD;gene_biotype=protein_coding;locus_tag=LDO50_RS10415;old_locus_tag=BVI1335_1750021 NZ_CAJZAO010000085.1 Protein Homology CDS 21577 22146 . - 0 ID=cds-WP_011882991.1;Parent=gene-LDO50_RS10415;Dbxref=GenBank:WP_011882991.1;Name=WP_011882991.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaD;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655751.1;locus_tag=LDO50_RS10415;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaD;protein_id=WP_011882991.1;transl_table=11 NZ_CAJZAO010000085.1 RefSeq gene 22181 22984 . - . ID=gene-LDO50_RS10420;Name=paaC;gbkey=Gene;gene=paaC;gene_biotype=protein_coding;locus_tag=LDO50_RS10420;old_locus_tag=BVI1335_1750022 NZ_CAJZAO010000085.1 Protein Homology CDS 22181 22984 . - 0 ID=cds-WP_034192909.1;Parent=gene-LDO50_RS10420;Dbxref=GenBank:WP_034192909.1;Name=WP_034192909.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaC;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009971143.1;locus_tag=LDO50_RS10420;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaC;protein_id=WP_034192909.1;transl_table=11 NZ_CAJZAO010000085.1 RefSeq gene 22995 23279 . - . ID=gene-LDO50_RS10425;Name=paaB;gbkey=Gene;gene=paaB;gene_biotype=protein_coding;locus_tag=LDO50_RS10425;old_locus_tag=BVI1335_1750023 NZ_CAJZAO010000085.1 Protein Homology CDS 22995 23279 . - 0 ID=cds-WP_006752453.1;Parent=gene-LDO50_RS10425;Dbxref=GenBank:WP_006752453.1;Name=WP_006752453.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaB;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895631.1;locus_tag=LDO50_RS10425;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaB;protein_id=WP_006752453.1;transl_table=11 NZ_CAJZAO010000085.1 RefSeq gene 23315 24313 . - . ID=gene-LDO50_RS10430;Name=paaA;gbkey=Gene;gene=paaA;gene_biotype=protein_coding;locus_tag=LDO50_RS10430;old_locus_tag=BVI1335_1750024 NZ_CAJZAO010000085.1 Protein Homology CDS 23315 24313 . - 0 ID=cds-WP_059462340.1;Parent=gene-LDO50_RS10430;Dbxref=GenBank:WP_059462340.1;Name=WP_059462340.1;Ontology_term=GO:0010124,GO:0097266;gbkey=CDS;gene=paaA;go_function=phenylacetyl-CoA 1%2C2-epoxidase activity|0097266||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023750.1;locus_tag=LDO50_RS10430;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaA;protein_id=WP_059462340.1;transl_table=11 NZ_CAJZAO010000085.1 RefSeq gene 24517 25779 . + . ID=gene-LDO50_RS10435;Name=LDO50_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10435;old_locus_tag=BVI1335_1750025 NZ_CAJZAO010000085.1 Protein Homology CDS 24517 25779 . + 0 ID=cds-WP_069246120.1;Parent=gene-LDO50_RS10435;Dbxref=GenBank:WP_069246120.1;Name=WP_069246120.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497417.1;locus_tag=LDO50_RS10435;product=SGNH/GDSL hydrolase family protein;protein_id=WP_069246120.1;transl_table=11 ##sequence-region NZ_CAJZAO010000086.1 1 1570 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000086.1 RefSeq region 1 1570 . + . ID=NZ_CAJZAO010000086.1:1..1570;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_176 NZ_CAJZAO010000086.1 RefSeq pseudogene 1 199 . - . ID=gene-LDO50_RS10440;Name=LDO50_RS10440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS10440;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000086.1 Protein Homology CDS 1 199 . - 0 ID=cds-LDO50_RS10440;Parent=gene-LDO50_RS10440;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014193583.1;locus_tag=LDO50_RS10440;partial=true;product=electron transfer flavoprotein subunit beta/FixA family protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000086.1 RefSeq gene 390 1570 . - . ID=gene-LDO50_RS10445;Name=LDO50_RS10445;end_range=1570,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10445;old_locus_tag=BVI1335_1760002;partial=true NZ_CAJZAO010000086.1 Protein Homology CDS 390 1570 . - 2 ID=cds-WP_224019669.1;Parent=gene-LDO50_RS10445;Dbxref=GenBank:WP_224019669.1;Name=WP_224019669.1;Ontology_term=GO:0022900,GO:0004174,GO:0046872,GO:0051539;end_range=1570,.;gbkey=CDS;go_function=electron-transferring-flavoprotein dehydrogenase activity|0004174||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015003297.1;locus_tag=LDO50_RS10445;partial=true;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=WP_224019669.1;transl_table=11 ##sequence-region NZ_CAJZAO010000087.1 1 11700 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000087.1 RefSeq region 1 11700 . + . ID=NZ_CAJZAO010000087.1:1..11700;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_177 NZ_CAJZAO010000087.1 RefSeq pseudogene 1 541 . + . ID=gene-LDO50_RS10450;Name=LDO50_RS10450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS10450;old_locus_tag=BVI1335_1770001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000087.1 Protein Homology CDS 1 541 . + 1 ID=cds-LDO50_RS10450;Parent=gene-LDO50_RS10450;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879800.1;locus_tag=LDO50_RS10450;partial=true;product=3-deoxy-D-arabino-heptulosonate 7-phosphate synthase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000087.1 RefSeq gene 976 3144 . + . ID=gene-LDO50_RS10455;Name=LDO50_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10455;old_locus_tag=BVI1335_1770002 NZ_CAJZAO010000087.1 Protein Homology CDS 976 3144 . + 0 ID=cds-WP_059456131.1;Parent=gene-LDO50_RS10455;Dbxref=GenBank:WP_059456131.1;Name=WP_059456131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660619.1;locus_tag=LDO50_RS10455;product=hypothetical protein;protein_id=WP_059456131.1;transl_table=11 NZ_CAJZAO010000087.1 RefSeq gene 3152 3859 . + . ID=gene-LDO50_RS10460;Name=LDO50_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10460;old_locus_tag=BVI1335_1770003 NZ_CAJZAO010000087.1 Protein Homology CDS 3152 3859 . + 0 ID=cds-WP_224019670.1;Parent=gene-LDO50_RS10460;Dbxref=GenBank:WP_224019670.1;Name=WP_224019670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879798.1;locus_tag=LDO50_RS10460;product=DUF3142 domain-containing protein;protein_id=WP_224019670.1;transl_table=11 NZ_CAJZAO010000087.1 RefSeq gene 3923 4759 . - . ID=gene-LDO50_RS10465;Name=LDO50_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10465;old_locus_tag=BVI1335_1770004 NZ_CAJZAO010000087.1 Protein Homology CDS 3923 4759 . - 0 ID=cds-WP_224019671.1;Parent=gene-LDO50_RS10465;Dbxref=GenBank:WP_224019671.1;Name=WP_224019671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879797.1;locus_tag=LDO50_RS10465;product=alpha/beta fold hydrolase;protein_id=WP_224019671.1;transl_table=11 NZ_CAJZAO010000087.1 RefSeq gene 5019 5852 . - . ID=gene-LDO50_RS10470;Name=LDO50_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10470;old_locus_tag=BVI1335_1770005 NZ_CAJZAO010000087.1 Protein Homology CDS 5019 5852 . - 0 ID=cds-WP_224019672.1;Parent=gene-LDO50_RS10470;Dbxref=GenBank:WP_224019672.1;Name=WP_224019672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879796.1;locus_tag=LDO50_RS10470;product=oxidoreductase;protein_id=WP_224019672.1;transl_table=11 NZ_CAJZAO010000087.1 RefSeq gene 5947 6924 . + . ID=gene-LDO50_RS10475;Name=LDO50_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10475;old_locus_tag=BVI1335_1770006 NZ_CAJZAO010000087.1 Protein Homology CDS 5947 6924 . + 0 ID=cds-WP_224019673.1;Parent=gene-LDO50_RS10475;Dbxref=GenBank:WP_224019673.1;Name=WP_224019673.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725609.1;locus_tag=LDO50_RS10475;product=AraC family transcriptional regulator;protein_id=WP_224019673.1;transl_table=11 NZ_CAJZAO010000087.1 RefSeq gene 6962 8134 . - . ID=gene-LDO50_RS10480;Name=LDO50_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10480;old_locus_tag=BVI1335_1770007 NZ_CAJZAO010000087.1 Protein Homology CDS 6962 8134 . - 0 ID=cds-WP_224019674.1;Parent=gene-LDO50_RS10480;Dbxref=GenBank:WP_224019674.1;Name=WP_224019674.1;Ontology_term=GO:0005975,GO:0016857,GO:0030246;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879794.1;locus_tag=LDO50_RS10480;product=aldose epimerase family protein;protein_id=WP_224019674.1;transl_table=11 NZ_CAJZAO010000087.1 RefSeq gene 8274 9128 . - . ID=gene-LDO50_RS10485;Name=LDO50_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10485;old_locus_tag=BVI1335_1770008 NZ_CAJZAO010000087.1 Protein Homology CDS 8274 9128 . - 0 ID=cds-WP_011879793.1;Parent=gene-LDO50_RS10485;Dbxref=GenBank:WP_011879793.1;Name=WP_011879793.1;Ontology_term=GO:0006631;gbkey=CDS;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337246.1;locus_tag=LDO50_RS10485;product=3-hydroxybutyryl-CoA dehydrogenase;protein_id=WP_011879793.1;transl_table=11 NZ_CAJZAO010000087.1 RefSeq gene 9168 10361 . - . ID=gene-LDO50_RS10490;Name=bktB;gbkey=Gene;gene=bktB;gene_biotype=protein_coding;locus_tag=LDO50_RS10490;old_locus_tag=BVI1335_1770009 NZ_CAJZAO010000087.1 Protein Homology CDS 9168 10361 . - 0 ID=cds-WP_224019675.1;Parent=gene-LDO50_RS10490;Dbxref=GenBank:WP_224019675.1;Name=WP_224019675.1;Ontology_term=GO:0003985;gbkey=CDS;gene=bktB;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337245.1;locus_tag=LDO50_RS10490;product=beta-ketothiolase BktB;protein_id=WP_224019675.1;transl_table=11 NZ_CAJZAO010000087.1 RefSeq gene 10410 11700 . - . ID=gene-LDO50_RS10495;Name=LDO50_RS10495;end_range=11700,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10495;old_locus_tag=BVI1335_1770010;partial=true NZ_CAJZAO010000087.1 Protein Homology CDS 10410 11700 . - 1 ID=cds-WP_224019676.1;Parent=gene-LDO50_RS10495;Dbxref=GenBank:WP_224019676.1;Name=WP_224019676.1;Ontology_term=GO:0022900,GO:0004174,GO:0046872,GO:0051539;end_range=11700,.;gbkey=CDS;go_function=electron-transferring-flavoprotein dehydrogenase activity|0004174||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015003297.1;locus_tag=LDO50_RS10495;partial=true;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=WP_224019676.1;transl_table=11 ##sequence-region NZ_CAJZAO010000088.1 1 33258 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000088.1 RefSeq region 1 33258 . + . ID=NZ_CAJZAO010000088.1:1..33258;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_178 NZ_CAJZAO010000088.1 RefSeq gene 1 845 . + . ID=gene-LDO50_RS10500;Name=LDO50_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10500;old_locus_tag=BVI1335_1780002;partial=true;start_range=.,1 NZ_CAJZAO010000088.1 Protein Homology CDS 1 845 . + 2 ID=cds-WP_224019677.1;Parent=gene-LDO50_RS10500;Dbxref=GenBank:WP_224019677.1;Name=WP_224019677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879763.1;locus_tag=LDO50_RS10500;partial=true;product=oligosaccharide flippase family protein;protein_id=WP_224019677.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 842 2053 . + . ID=gene-LDO50_RS10505;Name=LDO50_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10505;old_locus_tag=BVI1335_1780001 NZ_CAJZAO010000088.1 Protein Homology CDS 842 2053 . + 0 ID=cds-WP_059494817.1;Parent=gene-LDO50_RS10505;Dbxref=GenBank:WP_059494817.1;Name=WP_059494817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879764.1;locus_tag=LDO50_RS10505;product=hypothetical protein;protein_id=WP_059494817.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 2050 2886 . + . ID=gene-LDO50_RS10510;Name=LDO50_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10510;old_locus_tag=BVI1335_1780003 NZ_CAJZAO010000088.1 Protein Homology CDS 2050 2886 . + 0 ID=cds-WP_011879765.1;Parent=gene-LDO50_RS10510;Dbxref=GenBank:WP_011879765.1;Name=WP_011879765.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725574.1;locus_tag=LDO50_RS10510;product=glycosyltransferase;protein_id=WP_011879765.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 2890 3993 . + . ID=gene-LDO50_RS10515;Name=LDO50_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10515;old_locus_tag=BVI1335_1780004 NZ_CAJZAO010000088.1 Protein Homology CDS 2890 3993 . + 0 ID=cds-WP_059494795.1;Parent=gene-LDO50_RS10515;Dbxref=GenBank:WP_059494795.1;Name=WP_059494795.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725575.1;locus_tag=LDO50_RS10515;product=glycosyltransferase family 4 protein;protein_id=WP_059494795.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 4060 4890 . + . ID=gene-LDO50_RS10520;Name=LDO50_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10520;old_locus_tag=BVI1335_1780005 NZ_CAJZAO010000088.1 Protein Homology CDS 4060 4890 . + 0 ID=cds-WP_011879767.1;Parent=gene-LDO50_RS10520;Dbxref=GenBank:WP_011879767.1;Name=WP_011879767.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725576.1;locus_tag=LDO50_RS10520;product=glycosyltransferase family 2 protein;protein_id=WP_011879767.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 4887 7202 . + . ID=gene-LDO50_RS10525;Name=LDO50_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10525;old_locus_tag=BVI1335_1780006 NZ_CAJZAO010000088.1 Protein Homology CDS 4887 7202 . + 0 ID=cds-WP_224019678.1;Parent=gene-LDO50_RS10525;Dbxref=GenBank:WP_224019678.1;Name=WP_224019678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879768.1;locus_tag=LDO50_RS10525;product=DUF4838 domain-containing protein;protein_id=WP_224019678.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 7199 9850 . + . ID=gene-LDO50_RS10530;Name=LDO50_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10530;old_locus_tag=BVI1335_1780007 NZ_CAJZAO010000088.1 Protein Homology CDS 7199 9850 . + 0 ID=cds-WP_046423193.1;Parent=gene-LDO50_RS10530;Dbxref=GenBank:WP_046423193.1;Name=WP_046423193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725578.1;locus_tag=LDO50_RS10530;product=polysaccharide pyruvyl transferase family protein;protein_id=WP_046423193.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 9852 10178 . + . ID=gene-LDO50_RS10535;Name=LDO50_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10535;old_locus_tag=BVI1335_1780008 NZ_CAJZAO010000088.1 Protein Homology CDS 9852 10178 . + 0 ID=cds-WP_014725579.1;Parent=gene-LDO50_RS10535;Dbxref=GenBank:WP_014725579.1;Name=WP_014725579.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725579.1;locus_tag=LDO50_RS10535;product=H-NS histone family protein;protein_id=WP_014725579.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 10263 11120 . + . ID=gene-LDO50_RS10540;Name=LDO50_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10540;old_locus_tag=BVI1335_1780009 NZ_CAJZAO010000088.1 Protein Homology CDS 10263 11120 . + 0 ID=cds-WP_059494799.1;Parent=gene-LDO50_RS10540;Dbxref=GenBank:WP_059494799.1;Name=WP_059494799.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879771.1;locus_tag=LDO50_RS10540;product=IclR family transcriptional regulator;protein_id=WP_059494799.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 11625 12053 . + . ID=gene-LDO50_RS10545;Name=LDO50_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10545;old_locus_tag=BVI1335_1780010 NZ_CAJZAO010000088.1 Protein Homology CDS 11625 12053 . + 0 ID=cds-WP_011879772.1;Parent=gene-LDO50_RS10545;Dbxref=GenBank:WP_011879772.1;Name=WP_011879772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660160.1;locus_tag=LDO50_RS10545;product=antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein;protein_id=WP_011879772.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 12050 12523 . + . ID=gene-LDO50_RS10550;Name=LDO50_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10550;old_locus_tag=BVI1335_1780011 NZ_CAJZAO010000088.1 Protein Homology CDS 12050 12523 . + 0 ID=cds-WP_011879773.1;Parent=gene-LDO50_RS10550;Dbxref=GenBank:WP_011879773.1;Name=WP_011879773.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879773.1;locus_tag=LDO50_RS10550;product=RES family NAD+ phosphorylase;protein_id=WP_011879773.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 12591 12905 . + . ID=gene-LDO50_RS10555;Name=LDO50_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10555;old_locus_tag=BVI1335_1780012 NZ_CAJZAO010000088.1 GeneMarkS-2+ CDS 12591 12905 . + 0 ID=cds-WP_230938910.1;Parent=gene-LDO50_RS10555;Dbxref=GenBank:WP_230938910.1;Name=WP_230938910.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS10555;product=hypothetical protein;protein_id=WP_230938910.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 12915 13732 . - . ID=gene-LDO50_RS10560;Name=LDO50_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10560;old_locus_tag=BVI1335_1780013 NZ_CAJZAO010000088.1 Protein Homology CDS 13384 13732 . - 0 ID=cds-WP_124259727.1;Parent=gene-LDO50_RS10560;Dbxref=GenBank:WP_124259727.1;Name=WP_124259727.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879774.1;locus_tag=LDO50_RS10560;product=IS5-like element ISBvi5 family transposase;protein_id=WP_124259727.1;transl_table=11 NZ_CAJZAO010000088.1 Protein Homology CDS 12915 13384 . - 2 ID=cds-WP_124259727.1;Parent=gene-LDO50_RS10560;Dbxref=GenBank:WP_124259727.1;Name=WP_124259727.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879774.1;locus_tag=LDO50_RS10560;product=IS5-like element ISBvi5 family transposase;protein_id=WP_124259727.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 14378 15586 . + . ID=gene-LDO50_RS10565;Name=LDO50_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10565;old_locus_tag=BVI1335_1780015 NZ_CAJZAO010000088.1 Protein Homology CDS 14378 15586 . + 0 ID=cds-WP_046423190.1;Parent=gene-LDO50_RS10565;Dbxref=GenBank:WP_046423190.1;Name=WP_046423190.1;Ontology_term=GO:0006950,GO:0061024,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=response to stress|0006950||IEA,membrane organization|0061024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879775.1;locus_tag=LDO50_RS10565;product=paraquat-inducible protein A;protein_id=WP_046423190.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 15583 16878 . + . ID=gene-LDO50_RS10570;Name=LDO50_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10570;old_locus_tag=BVI1335_1780016 NZ_CAJZAO010000088.1 Protein Homology CDS 15583 16878 . + 0 ID=cds-WP_059494805.1;Parent=gene-LDO50_RS10570;Dbxref=GenBank:WP_059494805.1;Name=WP_059494805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725589.1;locus_tag=LDO50_RS10570;product=MlaD family protein;protein_id=WP_059494805.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 16875 17492 . + . ID=gene-LDO50_RS10575;Name=LDO50_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10575;old_locus_tag=BVI1335_1780017 NZ_CAJZAO010000088.1 Protein Homology CDS 16875 17492 . + 0 ID=cds-WP_011879777.1;Parent=gene-LDO50_RS10575;Dbxref=GenBank:WP_011879777.1;Name=WP_011879777.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879777.1;locus_tag=LDO50_RS10575;product=PqiC family protein;protein_id=WP_011879777.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 17851 18387 . - . ID=gene-LDO50_RS10580;Name=LDO50_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10580;old_locus_tag=BVI1335_1780019 NZ_CAJZAO010000088.1 Protein Homology CDS 17851 18387 . - 0 ID=cds-WP_059494807.1;Parent=gene-LDO50_RS10580;Dbxref=GenBank:WP_059494807.1;Name=WP_059494807.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725591.1;locus_tag=LDO50_RS10580;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_059494807.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 18460 19497 . + . ID=gene-LDO50_RS10585;Name=LDO50_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10585;old_locus_tag=BVI1335_1780018 NZ_CAJZAO010000088.1 Protein Homology CDS 18460 19497 . + 0 ID=cds-WP_011879779.1;Parent=gene-LDO50_RS10585;Dbxref=GenBank:WP_011879779.1;Name=WP_011879779.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879779.1;locus_tag=LDO50_RS10585;product=AraC family transcriptional regulator;protein_id=WP_011879779.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 19552 19800 . - . ID=gene-LDO50_RS10590;Name=LDO50_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10590 NZ_CAJZAO010000088.1 GeneMarkS-2+ CDS 19552 19800 . - 0 ID=cds-WP_043292574.1;Parent=gene-LDO50_RS10590;Dbxref=GenBank:WP_043292574.1;Name=WP_043292574.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS10590;product=hypothetical protein;protein_id=WP_043292574.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 19915 20100 . - . ID=gene-LDO50_RS10595;Name=LDO50_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10595;old_locus_tag=BVI1335_1780021 NZ_CAJZAO010000088.1 Protein Homology CDS 19915 20100 . - 0 ID=cds-WP_186445488.1;Parent=gene-LDO50_RS10595;Dbxref=GenBank:WP_186445488.1;Name=WP_186445488.1;Ontology_term=GO:0031992,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=energy transducer activity|0031992||IEA;inference=COORDINATES: protein motif:HMM:TIGR01352.1;locus_tag=LDO50_RS10595;product=energy transducer TonB family protein;protein_id=WP_186445488.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 20185 20261 . - . ID=gene-LDO50_RS10600;Name=LDO50_RS10600;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS10600 NZ_CAJZAO010000088.1 tRNAscan-SE tRNA 20185 20261 . - . ID=rna-LDO50_RS10600;Parent=gene-LDO50_RS10600;anticodon=(pos:complement(20225..20227));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS10600;product=tRNA-Ala NZ_CAJZAO010000088.1 tRNAscan-SE exon 20185 20261 . - . ID=exon-LDO50_RS10600-1;Parent=rna-LDO50_RS10600;anticodon=(pos:complement(20225..20227));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS10600;product=tRNA-Ala NZ_CAJZAO010000088.1 RefSeq gene 20718 21437 . + . ID=gene-LDO50_RS10605;Name=LDO50_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10605;old_locus_tag=BVI1335_1780023 NZ_CAJZAO010000088.1 Protein Homology CDS 20718 21437 . + 0 ID=cds-WP_014725594.1;Parent=gene-LDO50_RS10605;Dbxref=GenBank:WP_014725594.1;Name=WP_014725594.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725594.1;locus_tag=LDO50_RS10605;product=response regulator transcription factor;protein_id=WP_014725594.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 21437 22930 . + . ID=gene-LDO50_RS10610;Name=LDO50_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10610;old_locus_tag=BVI1335_1780022 NZ_CAJZAO010000088.1 Protein Homology CDS 21437 22930 . + 0 ID=cds-WP_176295848.1;Parent=gene-LDO50_RS10610;Dbxref=GenBank:WP_176295848.1;Name=WP_176295848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337235.1;locus_tag=LDO50_RS10610;product=sensor histidine kinase;protein_id=WP_176295848.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 22968 24068 . - . ID=gene-LDO50_RS10615;Name=LDO50_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10615;old_locus_tag=BVI1335_1780024 NZ_CAJZAO010000088.1 Protein Homology CDS 22968 24068 . - 0 ID=cds-WP_011879785.1;Parent=gene-LDO50_RS10615;Dbxref=GenBank:WP_011879785.1;Name=WP_011879785.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545752.1;locus_tag=LDO50_RS10615;product=AraC family transcriptional regulator;protein_id=WP_011879785.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 24380 26014 . + . ID=gene-LDO50_RS10620;Name=LDO50_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10620;old_locus_tag=BVI1335_1780025 NZ_CAJZAO010000088.1 Protein Homology CDS 24380 26014 . + 0 ID=cds-WP_224019681.1;Parent=gene-LDO50_RS10620;Dbxref=GenBank:WP_224019681.1;Name=WP_224019681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725598.1;locus_tag=LDO50_RS10620;product=AMP-binding protein;protein_id=WP_224019681.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 26128 27174 . + . ID=gene-LDO50_RS10625;Name=LDO50_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10625;old_locus_tag=BVI1335_1780026 NZ_CAJZAO010000088.1 Protein Homology CDS 26128 27174 . + 0 ID=cds-WP_011879787.1;Parent=gene-LDO50_RS10625;Dbxref=GenBank:WP_011879787.1;Name=WP_011879787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879787.1;locus_tag=LDO50_RS10625;product=AraC family transcriptional regulator;protein_id=WP_011879787.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 27367 28779 . - . ID=gene-LDO50_RS10630;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=LDO50_RS10630;old_locus_tag=BVI1335_1780027 NZ_CAJZAO010000088.1 Protein Homology CDS 27367 28779 . - 0 ID=cds-WP_224019683.1;Parent=gene-LDO50_RS10630;Dbxref=GenBank:WP_224019683.1;Name=WP_224019683.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725601.1;locus_tag=LDO50_RS10630;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_224019683.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 28793 30394 . - . ID=gene-LDO50_RS10635;Name=LDO50_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10635;old_locus_tag=BVI1335_1780028 NZ_CAJZAO010000088.1 Protein Homology CDS 28793 30394 . - 0 ID=cds-WP_011879789.1;Parent=gene-LDO50_RS10635;Dbxref=GenBank:WP_011879789.1;Name=WP_011879789.1;Ontology_term=GO:1902600;gbkey=CDS;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012371936.1;locus_tag=LDO50_RS10635;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_011879789.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 31032 32822 . + . ID=gene-LDO50_RS10640;Name=LDO50_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10640;old_locus_tag=BVI1335_1780030 NZ_CAJZAO010000088.1 Protein Homology CDS 31032 32822 . + 0 ID=cds-WP_059453809.1;Parent=gene-LDO50_RS10640;Dbxref=GenBank:WP_059453809.1;Name=WP_059453809.1;Ontology_term=GO:0006631,GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904408.1;locus_tag=LDO50_RS10640;product=acyl-CoA dehydrogenase;protein_id=WP_059453809.1;transl_table=11 NZ_CAJZAO010000088.1 RefSeq gene 32902 33258 . + . ID=gene-LDO50_RS10645;Name=LDO50_RS10645;end_range=33258,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10645;partial=true NZ_CAJZAO010000088.1 Protein Homology CDS 32902 33258 . + 0 ID=cds-WP_372586090.1;Parent=gene-LDO50_RS10645;Dbxref=GenBank:WP_372586090.1;Name=WP_372586090.1;Ontology_term=GO:0000166,GO:0016491,GO:0071949;end_range=33258,.;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013434965.1;locus_tag=LDO50_RS10645;partial=true;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_372586090.1;transl_table=11 ##sequence-region NZ_CAJZAO010000089.1 1 4879 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000089.1 RefSeq region 1 4879 . + . ID=NZ_CAJZAO010000089.1:1..4879;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_179 NZ_CAJZAO010000089.1 RefSeq gene 1 862 . + . ID=gene-LDO50_RS10650;Name=LDO50_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10650;old_locus_tag=BVI1335_1790001;partial=true;start_range=.,1 NZ_CAJZAO010000089.1 Protein Homology CDS 1 862 . + 1 ID=cds-WP_224019685.1;Parent=gene-LDO50_RS10650;Dbxref=GenBank:WP_224019685.1;Name=WP_224019685.1;Ontology_term=GO:0033922;gbkey=CDS;go_function=peptidoglycan beta-N-acetylmuramidase activity|0033922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009896295.1;locus_tag=LDO50_RS10650;partial=true;product=exo-beta-N-acetylmuramidase NamZ family protein;protein_id=WP_224019685.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000089.1 RefSeq gene 978 1451 . - . ID=gene-LDO50_RS10655;Name=LDO50_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10655 NZ_CAJZAO010000089.1 Protein Homology CDS 978 1451 . - 0 ID=cds-WP_011880360.1;Parent=gene-LDO50_RS10655;Dbxref=GenBank:WP_011880360.1;Name=WP_011880360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488450.1;locus_tag=LDO50_RS10655;product=hypothetical protein;protein_id=WP_011880360.1;transl_table=11 NZ_CAJZAO010000089.1 RefSeq gene 1851 2207 . + . ID=gene-LDO50_RS10660;Name=LDO50_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10660;old_locus_tag=BVI1335_1790003 NZ_CAJZAO010000089.1 Protein Homology CDS 1851 2207 . + 0 ID=cds-WP_014725997.1;Parent=gene-LDO50_RS10660;Dbxref=GenBank:WP_014725997.1;Name=WP_014725997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725997.1;locus_tag=LDO50_RS10660;product=DUF1924 domain-containing protein;protein_id=WP_014725997.1;transl_table=11 NZ_CAJZAO010000089.1 RefSeq gene 2220 2729 . + . ID=gene-LDO50_RS10665;Name=LDO50_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10665;old_locus_tag=BVI1335_1790004 NZ_CAJZAO010000089.1 Protein Homology CDS 2220 2729 . + 0 ID=cds-WP_224019686.1;Parent=gene-LDO50_RS10665;Dbxref=GenBank:WP_224019686.1;Name=WP_224019686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725996.1;locus_tag=LDO50_RS10665;product=diheme cytochrome c;protein_id=WP_224019686.1;transl_table=11 NZ_CAJZAO010000089.1 RefSeq gene 2695 3432 . + . ID=gene-LDO50_RS10670;Name=LDO50_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10670;old_locus_tag=BVI1335_1790005 NZ_CAJZAO010000089.1 Protein Homology CDS 2695 3432 . + 0 ID=cds-WP_043292681.1;Parent=gene-LDO50_RS10670;Dbxref=GenBank:WP_043292681.1;Name=WP_043292681.1;Ontology_term=GO:0009055,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372548.1;locus_tag=LDO50_RS10670;product=cytochrome b/b6 domain-containing protein;protein_id=WP_043292681.1;transl_table=11 NZ_CAJZAO010000089.1 RefSeq gene 3461 4651 . + . ID=gene-LDO50_RS31445;Name=LDO50_RS31445;end_range=4651,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31445;old_locus_tag=BVI1335_1790006;partial=true NZ_CAJZAO010000089.1 Protein Homology CDS 3461 4651 . + 0 ID=cds-WP_443797760.1;Parent=gene-LDO50_RS31445;Dbxref=GenBank:WP_443797760.1;Name=WP_443797760.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;end_range=4651,.;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218219.1;locus_tag=LDO50_RS31445;partial=true;product=response regulator transcription factor;protein_id=WP_443797760.1;transl_table=11 NZ_CAJZAO010000089.1 RefSeq pseudogene 4662 4879 . + . ID=gene-LDO50_RS31450;Name=LDO50_RS31450;end_range=4879,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31450;partial=true;pseudo=true;start_range=.,4662 NZ_CAJZAO010000089.1 Protein Homology CDS 4662 4879 . + 1 ID=cds-LDO50_RS31450;Parent=gene-LDO50_RS31450;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=4879,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218219.1;locus_tag=LDO50_RS31450;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,4662;transl_table=11 ##sequence-region NZ_CAJZAO010000090.1 1 40998 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000090.1 RefSeq region 1 40998 . + . ID=NZ_CAJZAO010000090.1:1..40998;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_18 NZ_CAJZAO010000090.1 RefSeq gene 202 606 . + . ID=gene-LDO50_RS10685;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=LDO50_RS10685;old_locus_tag=BVI1335_180001 NZ_CAJZAO010000090.1 Protein Homology CDS 202 606 . + 0 ID=cds-WP_011885505.1;Parent=gene-LDO50_RS10685;Dbxref=GenBank:WP_011885505.1;Name=WP_011885505.1;Ontology_term=GO:0045893,GO:0046688,GO:0003677,GO:0003700,GO:0005507;gbkey=CDS;gene=cueR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,copper ion binding|0005507||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885505.1;locus_tag=LDO50_RS10685;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_011885505.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 822 968 . + . ID=gene-LDO50_RS10690;Name=LDO50_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10690;old_locus_tag=BVI1335_180002 NZ_CAJZAO010000090.1 Protein Homology CDS 822 968 . + 0 ID=cds-WP_011885504.1;Parent=gene-LDO50_RS10690;Dbxref=GenBank:WP_011885504.1;Name=WP_011885504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763866.1;locus_tag=LDO50_RS10690;product=DUF3563 family protein;protein_id=WP_011885504.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 1084 1458 . + . ID=gene-LDO50_RS10695;Name=LDO50_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10695;old_locus_tag=BVI1335_180003 NZ_CAJZAO010000090.1 Protein Homology CDS 1084 1458 . + 0 ID=cds-WP_011885503.1;Parent=gene-LDO50_RS10695;Dbxref=GenBank:WP_011885503.1;Name=WP_011885503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483871.1;locus_tag=LDO50_RS10695;product=hypothetical protein;protein_id=WP_011885503.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 1474 2319 . - . ID=gene-LDO50_RS10700;Name=LDO50_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10700;old_locus_tag=BVI1335_180004 NZ_CAJZAO010000090.1 Protein Homology CDS 1474 2319 . - 0 ID=cds-WP_224019687.1;Parent=gene-LDO50_RS10700;Dbxref=GenBank:WP_224019687.1;Name=WP_224019687.1;Ontology_term=GO:0015976,GO:0070475,GO:0003723,GO:0008988,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=carbon utilization|0015976||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755756.1;locus_tag=LDO50_RS10700;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_224019687.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 2431 3402 . - . ID=gene-LDO50_RS10705;Name=LDO50_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10705;old_locus_tag=BVI1335_180005 NZ_CAJZAO010000090.1 Protein Homology CDS 2431 3402 . - 0 ID=cds-WP_011885501.1;Parent=gene-LDO50_RS10705;Dbxref=GenBank:WP_011885501.1;Name=WP_011885501.1;Ontology_term=GO:0015459,GO:0016491,GO:0008076;gbkey=CDS;go_component=voltage-gated potassium channel complex|0008076||IEA;go_function=potassium channel regulator activity|0015459||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004535190.1;locus_tag=LDO50_RS10705;product=potassium channel beta subunit family protein;protein_id=WP_011885501.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 3565 4353 . + . ID=gene-LDO50_RS10710;Name=LDO50_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10710;old_locus_tag=BVI1335_180006 NZ_CAJZAO010000090.1 Protein Homology CDS 3565 4353 . + 0 ID=cds-WP_060043487.1;Parent=gene-LDO50_RS10710;Dbxref=GenBank:WP_060043487.1;Name=WP_060043487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885500.1;locus_tag=LDO50_RS10710;product=3-hydroxybutyrate dehydrogenase;protein_id=WP_060043487.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 4503 5702 . - . ID=gene-LDO50_RS10715;Name=LDO50_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10715;old_locus_tag=BVI1335_180007 NZ_CAJZAO010000090.1 Protein Homology CDS 4503 5702 . - 0 ID=cds-WP_014723338.1;Parent=gene-LDO50_RS10715;Dbxref=GenBank:WP_014723338.1;Name=WP_014723338.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009932860.1;locus_tag=LDO50_RS10715;product=amino acid aminotransferase;protein_id=WP_014723338.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 5961 8054 . + . ID=gene-LDO50_RS10720;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=LDO50_RS10720;old_locus_tag=BVI1335_180008 NZ_CAJZAO010000090.1 Protein Homology CDS 5961 8054 . + 0 ID=cds-WP_011885498.1;Parent=gene-LDO50_RS10720;Dbxref=GenBank:WP_011885498.1;Name=WP_011885498.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885498.1;locus_tag=LDO50_RS10720;product=excinuclease ABC subunit UvrB;protein_id=WP_011885498.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 8287 8838 . + . ID=gene-LDO50_RS10725;Name=LDO50_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10725;old_locus_tag=BVI1335_180009 NZ_CAJZAO010000090.1 Protein Homology CDS 8287 8838 . + 0 ID=cds-WP_011885497.1;Parent=gene-LDO50_RS10725;Dbxref=GenBank:WP_011885497.1;Name=WP_011885497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407929.1;locus_tag=LDO50_RS10725;product=iron transporter;protein_id=WP_011885497.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 8892 9224 . + . ID=gene-LDO50_RS10730;Name=LDO50_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10730;old_locus_tag=BVI1335_180010 NZ_CAJZAO010000090.1 Protein Homology CDS 8892 9224 . + 0 ID=cds-WP_011885496.1;Parent=gene-LDO50_RS10730;Dbxref=GenBank:WP_011885496.1;Name=WP_011885496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530725.1;locus_tag=LDO50_RS10730;product=cupredoxin domain-containing protein;protein_id=WP_011885496.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 9282 10124 . + . ID=gene-LDO50_RS10735;Name=LDO50_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10735;old_locus_tag=BVI1335_180012 NZ_CAJZAO010000090.1 Protein Homology CDS 9282 10124 . + 0 ID=cds-WP_011885495.1;Parent=gene-LDO50_RS10735;Dbxref=GenBank:WP_011885495.1;Name=WP_011885495.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009914340.1;locus_tag=LDO50_RS10735;product=FTR1 family iron permease;protein_id=WP_011885495.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 10121 11518 . + . ID=gene-LDO50_RS10740;Name=LDO50_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10740;old_locus_tag=BVI1335_180011 NZ_CAJZAO010000090.1 Protein Homology CDS 10121 11518 . + 0 ID=cds-WP_011885494.1;Parent=gene-LDO50_RS10740;Dbxref=GenBank:WP_011885494.1;Name=WP_011885494.1;Ontology_term=GO:0051539;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011852695.1;locus_tag=LDO50_RS10740;product=4Fe-4S binding protein;protein_id=WP_011885494.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 11841 12086 . - . ID=gene-LDO50_RS10745;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=LDO50_RS10745;old_locus_tag=BVI1335_180013 NZ_CAJZAO010000090.1 Protein Homology CDS 11841 12086 . - 0 ID=cds-WP_011885493.1;Parent=gene-LDO50_RS10745;Dbxref=GenBank:WP_011885493.1;Name=WP_011885493.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478306.1;locus_tag=LDO50_RS10745;product=hemin uptake protein HemP;protein_id=WP_011885493.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 12238 12720 . - . ID=gene-LDO50_RS10750;Name=LDO50_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10750;old_locus_tag=BVI1335_180015 NZ_CAJZAO010000090.1 Protein Homology CDS 12238 12720 . - 0 ID=cds-WP_011885492.1;Parent=gene-LDO50_RS10750;Dbxref=GenBank:WP_011885492.1;Name=WP_011885492.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011852697.1;locus_tag=LDO50_RS10750;product=SRPBCC family protein;protein_id=WP_011885492.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 12821 13693 . - . ID=gene-LDO50_RS10755;Name=LDO50_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10755;old_locus_tag=BVI1335_180016 NZ_CAJZAO010000090.1 Protein Homology CDS 12821 13693 . - 0 ID=cds-WP_059474274.1;Parent=gene-LDO50_RS10755;Dbxref=GenBank:WP_059474274.1;Name=WP_059474274.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525407.1;locus_tag=LDO50_RS10755;product=pirin family protein;protein_id=WP_059474274.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 13816 14799 . + . ID=gene-LDO50_RS10760;Name=LDO50_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10760;old_locus_tag=BVI1335_180017 NZ_CAJZAO010000090.1 Protein Homology CDS 13816 14799 . + 0 ID=cds-WP_059474275.1;Parent=gene-LDO50_RS10760;Dbxref=GenBank:WP_059474275.1;Name=WP_059474275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723335.1;locus_tag=LDO50_RS10760;product=LysR family transcriptional regulator;protein_id=WP_059474275.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 15172 15600 . - . ID=gene-LDO50_RS10765;Name=LDO50_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10765;old_locus_tag=BVI1335_180018 NZ_CAJZAO010000090.1 Protein Homology CDS 15172 15600 . - 0 ID=cds-WP_011885489.1;Parent=gene-LDO50_RS10765;Dbxref=GenBank:WP_011885489.1;Name=WP_011885489.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011401478.1;locus_tag=LDO50_RS10765;product=ExbD/TolR family protein;protein_id=WP_011885489.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 15614 16345 . - . ID=gene-LDO50_RS10770;Name=LDO50_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10770;old_locus_tag=BVI1335_180019 NZ_CAJZAO010000090.1 Protein Homology CDS 15614 16345 . - 0 ID=cds-WP_011885488.1;Parent=gene-LDO50_RS10770;Dbxref=GenBank:WP_011885488.1;Name=WP_011885488.1;Ontology_term=GO:0015031,GO:0015252,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=proton channel activity|0015252||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188455.1;locus_tag=LDO50_RS10770;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_011885488.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 16380 17120 . - . ID=gene-LDO50_RS10775;Name=LDO50_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10775;old_locus_tag=BVI1335_180020 NZ_CAJZAO010000090.1 Protein Homology CDS 16380 17120 . - 0 ID=cds-WP_175901216.1;Parent=gene-LDO50_RS10775;Dbxref=GenBank:WP_175901216.1;Name=WP_175901216.1;Ontology_term=GO:0015031,GO:0015891,GO:0055085,GO:0031992,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=energy transducer activity|0031992||IEA;go_process=protein transport|0015031||IEA,siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492728.1;locus_tag=LDO50_RS10775;product=energy transducer TonB;protein_id=WP_175901216.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 17338 17574 . - . ID=gene-LDO50_RS10780;Name=LDO50_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10780;old_locus_tag=BVI1335_180022 NZ_CAJZAO010000090.1 Protein Homology CDS 17338 17574 . - 0 ID=cds-WP_011885486.1;Parent=gene-LDO50_RS10780;Dbxref=GenBank:WP_011885486.1;Name=WP_011885486.1;Ontology_term=GO:0046872,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187745.1;locus_tag=LDO50_RS10780;product=(2Fe-2S)-binding protein;protein_id=WP_011885486.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 17754 18614 . - . ID=gene-LDO50_RS10785;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=LDO50_RS10785;old_locus_tag=BVI1335_180023 NZ_CAJZAO010000090.1 Protein Homology CDS 17754 18614 . - 0 ID=cds-WP_046428678.1;Parent=gene-LDO50_RS10785;Dbxref=GenBank:WP_046428678.1;Name=WP_046428678.1;Ontology_term=GO:0009252,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723333.1;locus_tag=LDO50_RS10785;product=glutamate racemase;protein_id=WP_046428678.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 18652 19128 . - . ID=gene-LDO50_RS10790;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=LDO50_RS10790;old_locus_tag=BVI1335_180024 NZ_CAJZAO010000090.1 Protein Homology CDS 18652 19128 . - 0 ID=cds-WP_011885484.1;Parent=gene-LDO50_RS10790;Dbxref=GenBank:WP_011885484.1;Name=WP_011885484.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028498.1;locus_tag=LDO50_RS10790;product=bacterioferritin;protein_id=WP_011885484.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 19331 20854 . - . ID=gene-LDO50_RS10795;Name=LDO50_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10795;old_locus_tag=BVI1335_180025 NZ_CAJZAO010000090.1 Protein Homology CDS 19331 20854 . - 0 ID=cds-WP_034194836.1;Parent=gene-LDO50_RS10795;Dbxref=GenBank:WP_034194836.1;Name=WP_034194836.1;Ontology_term=GO:0006091,GO:0006099,GO:0004333,GO:0046872,GO:0051539;gbkey=CDS;go_function=fumarate hydratase activity|0004333||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=generation of precursor metabolites and energy|0006091||IEA,tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549402.1;locus_tag=LDO50_RS10795;product=fumarate hydratase;protein_id=WP_034194836.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 20897 21478 . - . ID=gene-LDO50_RS10800;Name=LDO50_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10800;old_locus_tag=BVI1335_180026 NZ_CAJZAO010000090.1 Protein Homology CDS 20897 21478 . - 0 ID=cds-WP_011885482.1;Parent=gene-LDO50_RS10800;Dbxref=GenBank:WP_011885482.1;Name=WP_011885482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407941.1;locus_tag=LDO50_RS10800;product=TIGR00645 family protein;protein_id=WP_011885482.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 21601 22503 . - . ID=gene-LDO50_RS10805;Name=LDO50_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10805;old_locus_tag=BVI1335_180027 NZ_CAJZAO010000090.1 Protein Homology CDS 21601 22503 . - 0 ID=cds-WP_011885481.1;Parent=gene-LDO50_RS10805;Dbxref=GenBank:WP_011885481.1;Name=WP_011885481.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549404.1;locus_tag=LDO50_RS10805;product=DMT family transporter;protein_id=WP_011885481.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 22820 23354 . + . ID=gene-LDO50_RS31455;Name=LDO50_RS31455;end_range=23354,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31455;old_locus_tag=BVI1335_180028;partial=true NZ_CAJZAO010000090.1 Protein Homology CDS 22820 23354 . + 0 ID=cds-WP_443797761.1;Parent=gene-LDO50_RS31455;Dbxref=GenBank:WP_443797761.1;Name=WP_443797761.1;end_range=23354,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328876.1;locus_tag=LDO50_RS31455;partial=true;product=acetyl-coenzyme A synthetase N-terminal domain-containing protein;protein_id=WP_443797761.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 23365 24494 . + . ID=gene-LDO50_RS10810;Name=LDO50_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10810;old_locus_tag=BVI1335_180029;partial=true;start_range=.,23365 NZ_CAJZAO010000090.1 Protein Homology CDS 23365 24494 . + 2 ID=cds-WP_443797762.1;Parent=gene-LDO50_RS10810;Dbxref=GenBank:WP_443797762.1;Name=WP_443797762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328876.1;locus_tag=LDO50_RS10810;partial=true;product=AMP-binding protein;protein_id=WP_443797762.1;start_range=.,23365;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 24581 24931 . + . ID=gene-LDO50_RS10815;Name=LDO50_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10815;old_locus_tag=BVI1335_180030 NZ_CAJZAO010000090.1 Protein Homology CDS 24581 24931 . + 0 ID=cds-WP_011885479.1;Parent=gene-LDO50_RS10815;Dbxref=GenBank:WP_011885479.1;Name=WP_011885479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885479.1;locus_tag=LDO50_RS10815;product=DUF4212 domain-containing protein;protein_id=WP_011885479.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 24935 26950 . + . ID=gene-LDO50_RS10820;Name=LDO50_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10820;old_locus_tag=BVI1335_180031 NZ_CAJZAO010000090.1 Protein Homology CDS 24935 26950 . + 0 ID=cds-WP_011885478.1;Parent=gene-LDO50_RS10820;Dbxref=GenBank:WP_011885478.1;Name=WP_011885478.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187151.1;locus_tag=LDO50_RS10820;product=sodium:solute symporter family protein;protein_id=WP_011885478.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 27007 27537 . - . ID=gene-LDO50_RS10825;Name=LDO50_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10825;old_locus_tag=BVI1335_180032 NZ_CAJZAO010000090.1 Protein Homology CDS 27007 27537 . - 0 ID=cds-WP_080484201.1;Parent=gene-LDO50_RS10825;Dbxref=GenBank:WP_080484201.1;Name=WP_080484201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691781.1;locus_tag=LDO50_RS10825;product=hypothetical protein;protein_id=WP_080484201.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 27679 28044 . - . ID=gene-LDO50_RS10830;Name=LDO50_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10830;old_locus_tag=BVI1335_180034 NZ_CAJZAO010000090.1 Protein Homology CDS 27679 28044 . - 0 ID=cds-WP_175995325.1;Parent=gene-LDO50_RS10830;Dbxref=GenBank:WP_175995325.1;Name=WP_175995325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734117.1;locus_tag=LDO50_RS10830;product=lysozyme inhibitor LprI family protein;protein_id=WP_175995325.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 28728 28979 . - . ID=gene-LDO50_RS10840;Name=LDO50_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10840;old_locus_tag=BVI1335_180037 NZ_CAJZAO010000090.1 Protein Homology CDS 28728 28979 . - 0 ID=cds-WP_224019688.1;Parent=gene-LDO50_RS10840;Dbxref=GenBank:WP_224019688.1;Name=WP_224019688.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899051.1;locus_tag=LDO50_RS10840;product=PAAR domain-containing protein;protein_id=WP_224019688.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 29108 29935 . - . ID=gene-LDO50_RS10845;Name=LDO50_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10845;old_locus_tag=BVI1335_180038 NZ_CAJZAO010000090.1 GeneMarkS-2+ CDS 29108 29935 . - 0 ID=cds-WP_443797763.1;Parent=gene-LDO50_RS10845;Dbxref=GenBank:WP_443797763.1;Name=WP_443797763.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS10845;product=hypothetical protein;protein_id=WP_443797763.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 29955 33026 . - . ID=gene-LDO50_RS10850;Name=LDO50_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10850;old_locus_tag=BVI1335_180039 NZ_CAJZAO010000090.1 Protein Homology CDS 29955 33026 . - 0 ID=cds-WP_175949668.1;Parent=gene-LDO50_RS10850;Dbxref=GenBank:WP_175949668.1;Name=WP_175949668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657435.1;locus_tag=LDO50_RS10850;product=lytic transglycosylase domain-containing protein;protein_id=WP_175949668.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 33076 35583 . - . ID=gene-LDO50_RS10855;Name=LDO50_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10855;old_locus_tag=BVI1335_180040 NZ_CAJZAO010000090.1 Protein Homology CDS 33076 35583 . - 0 ID=cds-WP_224019690.1;Parent=gene-LDO50_RS10855;Dbxref=GenBank:WP_224019690.1;Name=WP_224019690.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401578.1;locus_tag=LDO50_RS10855;product=type VI secretion system Vgr family protein;protein_id=WP_224019690.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 36597 36687 . - . ID=gene-LDO50_RS10860;Name=LDO50_RS10860;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS10860;old_locus_tag=BVI1335_TRNA43 NZ_CAJZAO010000090.1 tRNAscan-SE tRNA 36597 36687 . - . ID=rna-LDO50_RS10860;Parent=gene-LDO50_RS10860;anticodon=(pos:complement(36651..36653));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS10860;product=tRNA-Ser NZ_CAJZAO010000090.1 tRNAscan-SE exon 36597 36687 . - . ID=exon-LDO50_RS10860-1;Parent=rna-LDO50_RS10860;anticodon=(pos:complement(36651..36653));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS10860;product=tRNA-Ser NZ_CAJZAO010000090.1 RefSeq pseudogene 37456 38272 . + . ID=gene-LDO50_RS30970;Name=LDO50_RS30970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS30970;pseudo=true NZ_CAJZAO010000090.1 Protein Homology CDS 37456 38272 . + 0 ID=cds-LDO50_RS30970;Parent=gene-LDO50_RS30970;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482744.1;locus_tag=LDO50_RS30970;product=toxic anion resistance protein;pseudo=true;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 38284 39021 . + . ID=gene-LDO50_RS10875;Name=LDO50_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10875;old_locus_tag=BVI1335_180045 NZ_CAJZAO010000090.1 Protein Homology CDS 38284 39021 . + 0 ID=cds-WP_224019692.1;Parent=gene-LDO50_RS10875;Dbxref=GenBank:WP_224019692.1;Name=WP_224019692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497777.1;locus_tag=LDO50_RS10875;product=VWA domain-containing protein;protein_id=WP_224019692.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 39066 40082 . + . ID=gene-LDO50_RS10880;Name=LDO50_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10880;old_locus_tag=BVI1335_180046 NZ_CAJZAO010000090.1 Protein Homology CDS 39066 40082 . + 0 ID=cds-WP_224019693.1;Parent=gene-LDO50_RS10880;Dbxref=GenBank:WP_224019693.1;Name=WP_224019693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497778.1;locus_tag=LDO50_RS10880;product=DUF475 domain-containing protein;protein_id=WP_224019693.1;transl_table=11 NZ_CAJZAO010000090.1 RefSeq gene 40175 40831 . + . ID=gene-LDO50_RS10885;Name=LDO50_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10885;old_locus_tag=BVI1335_180047 NZ_CAJZAO010000090.1 Protein Homology CDS 40175 40831 . + 0 ID=cds-WP_034194585.1;Parent=gene-LDO50_RS10885;Dbxref=GenBank:WP_034194585.1;Name=WP_034194585.1;Ontology_term=GO:0050896;gbkey=CDS;go_process=response to stimulus|0050896||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482759.1;locus_tag=LDO50_RS10885;product=TerD family protein;protein_id=WP_034194585.1;transl_table=11 ##sequence-region NZ_CAJZAO010000091.1 1 20459 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000091.1 RefSeq region 1 20459 . + . ID=NZ_CAJZAO010000091.1:1..20459;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_180 NZ_CAJZAO010000091.1 RefSeq gene 1 1640 . - . ID=gene-LDO50_RS10890;Name=LDO50_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10890;partial=true;start_range=.,1 NZ_CAJZAO010000091.1 Protein Homology CDS 1 1640 . - 0 ID=cds-WP_224019695.1;Parent=gene-LDO50_RS10890;Dbxref=GenBank:WP_224019695.1;Name=WP_224019695.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490501.1;locus_tag=LDO50_RS10890;partial=true;product=flavin-containing monooxygenase;protein_id=WP_224019695.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000091.1 RefSeq gene 1627 3336 . - . ID=gene-LDO50_RS10895;Name=LDO50_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10895;old_locus_tag=BVI1335_1800002 NZ_CAJZAO010000091.1 Protein Homology CDS 1627 3336 . - 0 ID=cds-WP_034193909.1;Parent=gene-LDO50_RS10895;Dbxref=GenBank:WP_034193909.1;Name=WP_034193909.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725969.1;locus_tag=LDO50_RS10895;product=GMC family oxidoreductase;protein_id=WP_034193909.1;transl_table=11 NZ_CAJZAO010000091.1 RefSeq gene 3362 4783 . - . ID=gene-LDO50_RS10900;Name=LDO50_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10900;old_locus_tag=BVI1335_1800003 NZ_CAJZAO010000091.1 Protein Homology CDS 3362 4783 . - 0 ID=cds-WP_060043666.1;Parent=gene-LDO50_RS10900;Dbxref=GenBank:WP_060043666.1;Name=WP_060043666.1;Ontology_term=GO:0006081,GO:0050269;gbkey=CDS;go_function=coniferyl-aldehyde dehydrogenase [NAD(P)+] activity|0050269||IEA;go_process=aldehyde metabolic process|0006081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880326.1;locus_tag=LDO50_RS10900;product=coniferyl aldehyde dehydrogenase;protein_id=WP_060043666.1;transl_table=11 NZ_CAJZAO010000091.1 RefSeq gene 4925 5959 . + . ID=gene-LDO50_RS10905;Name=LDO50_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10905;old_locus_tag=BVI1335_1800005 NZ_CAJZAO010000091.1 Protein Homology CDS 4925 5959 . + 0 ID=cds-WP_043292675.1;Parent=gene-LDO50_RS10905;Dbxref=GenBank:WP_043292675.1;Name=WP_043292675.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725967.1;locus_tag=LDO50_RS10905;product=AraC family transcriptional regulator;protein_id=WP_043292675.1;transl_table=11 NZ_CAJZAO010000091.1 RefSeq gene 6276 6542 . - . ID=gene-LDO50_RS10910;Name=LDO50_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10910;old_locus_tag=BVI1335_1800006 NZ_CAJZAO010000091.1 Protein Homology CDS 6276 6542 . - 0 ID=cds-WP_060043667.1;Parent=gene-LDO50_RS10910;Dbxref=GenBank:WP_060043667.1;Name=WP_060043667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492764.1;locus_tag=LDO50_RS10910;product=XapX domain-containing protein;protein_id=WP_060043667.1;transl_table=11 NZ_CAJZAO010000091.1 RefSeq gene 6850 7536 . + . ID=gene-LDO50_RS10915;Name=LDO50_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10915;old_locus_tag=BVI1335_1800007 NZ_CAJZAO010000091.1 Protein Homology CDS 6850 7536 . + 0 ID=cds-WP_014725964.1;Parent=gene-LDO50_RS10915;Dbxref=GenBank:WP_014725964.1;Name=WP_014725964.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337464.1;locus_tag=LDO50_RS10915;product=hydrolase;protein_id=WP_014725964.1;transl_table=11 NZ_CAJZAO010000091.1 RefSeq gene 7702 7869 . + . ID=gene-LDO50_RS10920;Name=LDO50_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10920;old_locus_tag=BVI1335_1800008 NZ_CAJZAO010000091.1 Protein Homology CDS 7702 7869 . + 0 ID=cds-WP_014725963.1;Parent=gene-LDO50_RS10920;Dbxref=GenBank:WP_014725963.1;Name=WP_014725963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725963.1;locus_tag=LDO50_RS10920;product=DUF1427 family protein;protein_id=WP_014725963.1;transl_table=11 NZ_CAJZAO010000091.1 RefSeq gene 7889 9778 . + . ID=gene-LDO50_RS10925;Name=LDO50_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10925;old_locus_tag=BVI1335_1800009 NZ_CAJZAO010000091.1 Protein Homology CDS 7889 9778 . + 0 ID=cds-WP_060043742.1;Parent=gene-LDO50_RS10925;Dbxref=GenBank:WP_060043742.1;Name=WP_060043742.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482680.1;locus_tag=LDO50_RS10925;product=amidohydrolase;protein_id=WP_060043742.1;transl_table=11 NZ_CAJZAO010000091.1 RefSeq gene 9780 10232 . + . ID=gene-LDO50_RS10930;Name=LDO50_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10930;old_locus_tag=BVI1335_1800010 NZ_CAJZAO010000091.1 Protein Homology CDS 9780 10232 . + 0 ID=cds-WP_060043669.1;Parent=gene-LDO50_RS10930;Dbxref=GenBank:WP_060043669.1;Name=WP_060043669.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725961.1;locus_tag=LDO50_RS10930;product=DoxX family protein;protein_id=WP_060043669.1;transl_table=11 NZ_CAJZAO010000091.1 RefSeq gene 10851 12596 . - . ID=gene-LDO50_RS10935;Name=LDO50_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10935;old_locus_tag=BVI1335_1800012 NZ_CAJZAO010000091.1 Protein Homology CDS 10851 12596 . - 0 ID=cds-WP_060043673.1;Parent=gene-LDO50_RS10935;Dbxref=GenBank:WP_060043673.1;Name=WP_060043673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661335.1;locus_tag=LDO50_RS10935;product=cholesterol oxidase substrate-binding domain-containing protein;protein_id=WP_060043673.1;transl_table=11 NZ_CAJZAO010000091.1 RefSeq gene 13773 14576 . + . ID=gene-LDO50_RS10940;Name=LDO50_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10940;old_locus_tag=BVI1335_1800013 NZ_CAJZAO010000091.1 Protein Homology CDS 13773 14576 . + 0 ID=cds-WP_060043675.1;Parent=gene-LDO50_RS10940;Dbxref=GenBank:WP_060043675.1;Name=WP_060043675.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725956.1;locus_tag=LDO50_RS10940;product=helix-turn-helix transcriptional regulator;protein_id=WP_060043675.1;transl_table=11 NZ_CAJZAO010000091.1 RefSeq gene 14883 15767 . - . ID=gene-LDO50_RS10945;Name=LDO50_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10945;old_locus_tag=BVI1335_1800014 NZ_CAJZAO010000091.1 Protein Homology CDS 14883 15767 . - 0 ID=cds-WP_046428105.1;Parent=gene-LDO50_RS10945;Dbxref=GenBank:WP_046428105.1;Name=WP_046428105.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661338.1;locus_tag=LDO50_RS10945;product=helix-turn-helix transcriptional regulator;protein_id=WP_046428105.1;transl_table=11 NZ_CAJZAO010000091.1 RefSeq gene 15914 17617 . - . ID=gene-LDO50_RS10950;Name=LDO50_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10950;old_locus_tag=BVI1335_1800015 NZ_CAJZAO010000091.1 Protein Homology CDS 15914 17617 . - 0 ID=cds-WP_059562236.1;Parent=gene-LDO50_RS10950;Dbxref=GenBank:WP_059562236.1;Name=WP_059562236.1;Ontology_term=GO:0015833,GO:0005524,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758501.1;locus_tag=LDO50_RS10950;product=cyclic peptide export ABC transporter;protein_id=WP_059562236.1;transl_table=11 NZ_CAJZAO010000091.1 RefSeq gene 17633 18112 . - . ID=gene-LDO50_RS10955;Name=LDO50_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10955;old_locus_tag=BVI1335_1800016 NZ_CAJZAO010000091.1 Protein Homology CDS 17633 18112 . - 0 ID=cds-WP_224019696.1;Parent=gene-LDO50_RS10955;Dbxref=GenBank:WP_224019696.1;Name=WP_224019696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725952.1;locus_tag=LDO50_RS10955;product=hypothetical protein;protein_id=WP_224019696.1;transl_table=11 NZ_CAJZAO010000091.1 RefSeq gene 18165 18821 . - . ID=gene-LDO50_RS10960;Name=LDO50_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10960;old_locus_tag=BVI1335_1800017 NZ_CAJZAO010000091.1 Protein Homology CDS 18165 18821 . - 0 ID=cds-WP_224019697.1;Parent=gene-LDO50_RS10960;Dbxref=GenBank:WP_224019697.1;Name=WP_224019697.1;Ontology_term=GO:1901271;gbkey=CDS;go_process=lipooligosaccharide biosynthetic process|1901271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332183.1;locus_tag=LDO50_RS10960;product=glycosyltransferase family 25 protein;protein_id=WP_224019697.1;transl_table=11 NZ_CAJZAO010000091.1 RefSeq gene 18818 20459 . - . ID=gene-LDO50_RS10965;Name=LDO50_RS10965;end_range=20459,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10965;old_locus_tag=BVI1335_1800018;partial=true NZ_CAJZAO010000091.1 Protein Homology CDS 18818 20459 . - 1 ID=cds-WP_224019698.1;Parent=gene-LDO50_RS10965;Dbxref=GenBank:WP_224019698.1;Name=WP_224019698.1;end_range=20459,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725950.1;locus_tag=LDO50_RS10965;partial=true;product=alpha/beta fold hydrolase;protein_id=WP_224019698.1;transl_table=11 ##sequence-region NZ_CAJZAO010000092.1 1 18409 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000092.1 RefSeq region 1 18409 . + . ID=NZ_CAJZAO010000092.1:1..18409;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_181 NZ_CAJZAO010000092.1 RefSeq gene 1 1519 . + . ID=gene-LDO50_RS10970;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=LDO50_RS10970;old_locus_tag=BVI1335_1810001;partial=true;start_range=.,1 NZ_CAJZAO010000092.1 Protein Homology CDS 1 1519 . + 1 ID=cds-WP_224019699.1;Parent=gene-LDO50_RS10970;Dbxref=GenBank:WP_224019699.1;Name=WP_224019699.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352553.1;locus_tag=LDO50_RS10970;partial=true;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_224019699.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000092.1 RefSeq gene 1667 2771 . + . ID=gene-LDO50_RS10975;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=LDO50_RS10975;old_locus_tag=BVI1335_1810003 NZ_CAJZAO010000092.1 Protein Homology CDS 1667 1747 . + 0 ID=cds-WP_106919330.1;Parent=gene-LDO50_RS10975;Dbxref=GenBank:WP_106919330.1;Name=WP_106919330.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006998981.1;locus_tag=LDO50_RS10975;product=peptide chain release factor 2;protein_id=WP_106919330.1;transl_table=11 NZ_CAJZAO010000092.1 Protein Homology CDS 1749 2771 . + 0 ID=cds-WP_106919330.1;Parent=gene-LDO50_RS10975;Dbxref=GenBank:WP_106919330.1;Name=WP_106919330.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006998981.1;locus_tag=LDO50_RS10975;product=peptide chain release factor 2;protein_id=WP_106919330.1;transl_table=11 NZ_CAJZAO010000092.1 RefSeq gene 2847 4373 . + . ID=gene-LDO50_RS10980;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=LDO50_RS10980;old_locus_tag=BVI1335_1810004 NZ_CAJZAO010000092.1 Protein Homology CDS 2847 4373 . + 0 ID=cds-WP_124259921.1;Parent=gene-LDO50_RS10980;Dbxref=GenBank:WP_124259921.1;Name=WP_124259921.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091959.1;locus_tag=LDO50_RS10980;product=lysine--tRNA ligase;protein_id=WP_124259921.1;transl_table=11 NZ_CAJZAO010000092.1 RefSeq gene 4721 5449 . + . ID=gene-LDO50_RS10985;Name=LDO50_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS10985;old_locus_tag=BVI1335_1810005 NZ_CAJZAO010000092.1 Protein Homology CDS 4721 5449 . + 0 ID=cds-WP_011885408.1;Parent=gene-LDO50_RS10985;Dbxref=GenBank:WP_011885408.1;Name=WP_011885408.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409697.1;locus_tag=LDO50_RS10985;product=glycine zipper 2TM domain-containing protein;protein_id=WP_011885408.1;transl_table=11 NZ_CAJZAO010000092.1 RefSeq gene 5557 5766 . - . ID=gene-LDO50_RS10990;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=LDO50_RS10990;old_locus_tag=BVI1335_1810006 NZ_CAJZAO010000092.1 Protein Homology CDS 5557 5766 . - 0 ID=cds-WP_011885409.1;Parent=gene-LDO50_RS10990;Dbxref=GenBank:WP_011885409.1;Name=WP_011885409.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601144.1;locus_tag=LDO50_RS10990;product=Fe-S cluster assembly protein IscX;protein_id=WP_011885409.1;transl_table=11 NZ_CAJZAO010000092.1 RefSeq gene 5803 6144 . - . ID=gene-LDO50_RS10995;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=LDO50_RS10995;old_locus_tag=BVI1335_1810007 NZ_CAJZAO010000092.1 Protein Homology CDS 5803 6144 . - 0 ID=cds-WP_011885410.1;Parent=gene-LDO50_RS10995;Dbxref=GenBank:WP_011885410.1;Name=WP_011885410.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193872.1;locus_tag=LDO50_RS10995;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_011885410.1;transl_table=11 NZ_CAJZAO010000092.1 RefSeq gene 6228 8096 . - . ID=gene-LDO50_RS11000;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=LDO50_RS11000;old_locus_tag=BVI1335_1810008 NZ_CAJZAO010000092.1 Protein Homology CDS 6228 8096 . - 0 ID=cds-WP_011885411.1;Parent=gene-LDO50_RS11000;Dbxref=GenBank:WP_011885411.1;Name=WP_011885411.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876413.1;locus_tag=LDO50_RS11000;product=Fe-S protein assembly chaperone HscA;protein_id=WP_011885411.1;transl_table=11 NZ_CAJZAO010000092.1 RefSeq gene 8151 8678 . - . ID=gene-LDO50_RS11005;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=LDO50_RS11005;old_locus_tag=BVI1335_1810009 NZ_CAJZAO010000092.1 Protein Homology CDS 8151 8678 . - 0 ID=cds-WP_041493968.1;Parent=gene-LDO50_RS11005;Dbxref=GenBank:WP_041493968.1;Name=WP_041493968.1;Ontology_term=GO:0051259,GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein complex oligomerization|0051259||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091954.1;locus_tag=LDO50_RS11005;product=Fe-S protein assembly co-chaperone HscB;protein_id=WP_041493968.1;transl_table=11 NZ_CAJZAO010000092.1 RefSeq gene 8773 9096 . - . ID=gene-LDO50_RS11010;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=LDO50_RS11010;old_locus_tag=BVI1335_1810010 NZ_CAJZAO010000092.1 Protein Homology CDS 8773 9096 . - 0 ID=cds-WP_011885413.1;Parent=gene-LDO50_RS11010;Dbxref=GenBank:WP_011885413.1;Name=WP_011885413.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=iscA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018417526.1;locus_tag=LDO50_RS11010;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_011885413.1;transl_table=11 NZ_CAJZAO010000092.1 RefSeq gene 9161 9568 . - . ID=gene-LDO50_RS11015;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=LDO50_RS11015;old_locus_tag=BVI1335_1810012 NZ_CAJZAO010000092.1 Protein Homology CDS 9161 9568 . - 0 ID=cds-WP_009691729.1;Parent=gene-LDO50_RS11015;Dbxref=GenBank:WP_009691729.1;Name=WP_009691729.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533937.1;locus_tag=LDO50_RS11015;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_009691729.1;transl_table=11 NZ_CAJZAO010000092.1 RefSeq gene 9637 10860 . - . ID=gene-LDO50_RS11020;Name=LDO50_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11020;old_locus_tag=BVI1335_1810014 NZ_CAJZAO010000092.1 Protein Homology CDS 9637 10860 . - 0 ID=cds-WP_011885414.1;Parent=gene-LDO50_RS11020;Dbxref=GenBank:WP_011885414.1;Name=WP_011885414.1;Ontology_term=GO:0044571,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=[2Fe-2S] cluster assembly|0044571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698736.1;locus_tag=LDO50_RS11020;product=IscS subfamily cysteine desulfurase;protein_id=WP_011885414.1;transl_table=11 NZ_CAJZAO010000092.1 RefSeq gene 10934 11473 . - . ID=gene-LDO50_RS11025;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=LDO50_RS11025;old_locus_tag=BVI1335_1810015 NZ_CAJZAO010000092.1 Protein Homology CDS 10934 11473 . - 0 ID=cds-WP_011885415.1;Parent=gene-LDO50_RS11025;Dbxref=GenBank:WP_011885415.1;Name=WP_011885415.1;Ontology_term=GO:0006355,GO:0003690,GO:0003700;gbkey=CDS;gene=iscR;go_function=double-stranded DNA binding|0003690||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195928.1;locus_tag=LDO50_RS11025;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_011885415.1;transl_table=11 NZ_CAJZAO010000092.1 RefSeq gene 11591 12073 . - . ID=gene-LDO50_RS11030;Name=LDO50_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11030;old_locus_tag=BVI1335_1810016 NZ_CAJZAO010000092.1 Protein Homology CDS 11591 12073 . - 0 ID=cds-WP_011885416.1;Parent=gene-LDO50_RS11030;Dbxref=GenBank:WP_011885416.1;Name=WP_011885416.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478388.1;locus_tag=LDO50_RS11030;product=low molecular weight protein-tyrosine-phosphatase;protein_id=WP_011885416.1;transl_table=11 NZ_CAJZAO010000092.1 RefSeq gene 12175 12402 . - . ID=gene-LDO50_RS11035;Name=LDO50_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11035;old_locus_tag=BVI1335_1810017 NZ_CAJZAO010000092.1 Protein Homology CDS 12175 12402 . - 0 ID=cds-WP_224019700.1;Parent=gene-LDO50_RS11035;Dbxref=GenBank:WP_224019700.1;Name=WP_224019700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478387.1;locus_tag=LDO50_RS11035;product=hypothetical protein;protein_id=WP_224019700.1;transl_table=11 NZ_CAJZAO010000092.1 RefSeq gene 12530 13942 . - . ID=gene-LDO50_RS11040;Name=LDO50_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11040;old_locus_tag=BVI1335_1810018 NZ_CAJZAO010000092.1 Protein Homology CDS 12530 13942 . - 0 ID=cds-WP_176000787.1;Parent=gene-LDO50_RS11040;Dbxref=GenBank:WP_176000787.1;Name=WP_176000787.1;Ontology_term=GO:0046872,GO:0051539;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408173.1;locus_tag=LDO50_RS11040;product=lactate utilization protein B;protein_id=WP_176000787.1;transl_table=11 NZ_CAJZAO010000092.1 RefSeq gene 13977 14699 . - . ID=gene-LDO50_RS11045;Name=LDO50_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11045;old_locus_tag=BVI1335_1810019 NZ_CAJZAO010000092.1 Protein Homology CDS 13977 14699 . - 0 ID=cds-WP_011885419.1;Parent=gene-LDO50_RS11045;Dbxref=GenBank:WP_011885419.1;Name=WP_011885419.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549455.1;locus_tag=LDO50_RS11045;product=(Fe-S)-binding protein;protein_id=WP_011885419.1;transl_table=11 NZ_CAJZAO010000092.1 RefSeq gene 14894 15703 . + . ID=gene-LDO50_RS11050;Name=LDO50_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11050;old_locus_tag=BVI1335_1810020 NZ_CAJZAO010000092.1 Protein Homology CDS 14894 15703 . + 0 ID=cds-WP_011885420.1;Parent=gene-LDO50_RS11050;Dbxref=GenBank:WP_011885420.1;Name=WP_011885420.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524720.1;locus_tag=LDO50_RS11050;product=IclR family transcriptional regulator;protein_id=WP_011885420.1;transl_table=11 NZ_CAJZAO010000092.1 RefSeq gene 15807 16958 . - . ID=gene-LDO50_RS11055;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=LDO50_RS11055;old_locus_tag=BVI1335_1810021 NZ_CAJZAO010000092.1 Protein Homology CDS 15807 16958 . - 0 ID=cds-WP_011885421.1;Parent=gene-LDO50_RS11055;Dbxref=GenBank:WP_011885421.1;Name=WP_011885421.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401961.1;locus_tag=LDO50_RS11055;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_011885421.1;transl_table=11 NZ_CAJZAO010000092.1 RefSeq gene 17612 18178 . + . ID=gene-LDO50_RS11060;Name=LDO50_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11060;old_locus_tag=BVI1335_1810024 NZ_CAJZAO010000092.1 Protein Homology CDS 17612 18178 . + 0 ID=cds-WP_011885423.1;Parent=gene-LDO50_RS11060;Dbxref=GenBank:WP_011885423.1;Name=WP_011885423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331817.1;locus_tag=LDO50_RS11060;product=phasin family protein;protein_id=WP_011885423.1;transl_table=11 ##sequence-region NZ_CAJZAO010000093.1 1 9065 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000093.1 RefSeq region 1 9065 . + . ID=NZ_CAJZAO010000093.1:1..9065;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_182 NZ_CAJZAO010000093.1 RefSeq gene 1 219 . + . ID=gene-LDO50_RS11065;Name=LDO50_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11065;old_locus_tag=BVI1335_1820001;partial=true;start_range=.,1 NZ_CAJZAO010000093.1 Protein Homology CDS 1 219 . + 0 ID=cds-WP_224019701.1;Parent=gene-LDO50_RS11065;Dbxref=GenBank:WP_224019701.1;Name=WP_224019701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538828.1;locus_tag=LDO50_RS11065;partial=true;product=DUF1214 domain-containing protein;protein_id=WP_224019701.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000093.1 RefSeq gene 372 4250 . + . ID=gene-LDO50_RS11070;Name=LDO50_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11070;old_locus_tag=BVI1335_1820002 NZ_CAJZAO010000093.1 Protein Homology CDS 372 4250 . + 0 ID=cds-WP_224019702.1;Parent=gene-LDO50_RS11070;Dbxref=GenBank:WP_224019702.1;Name=WP_224019702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548932.1;locus_tag=LDO50_RS11070;product=DUF748 domain-containing protein;protein_id=WP_224019702.1;transl_table=11 NZ_CAJZAO010000093.1 RefSeq gene 4326 4547 . - . ID=gene-LDO50_RS11075;Name=LDO50_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11075;old_locus_tag=BVI1335_1820003 NZ_CAJZAO010000093.1 Protein Homology CDS 4326 4547 . - 0 ID=cds-WP_011881008.1;Parent=gene-LDO50_RS11075;Dbxref=GenBank:WP_011881008.1;Name=WP_011881008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659770.1;locus_tag=LDO50_RS11075;product=hypothetical protein;protein_id=WP_011881008.1;transl_table=11 NZ_CAJZAO010000093.1 RefSeq gene 4799 6457 . + . ID=gene-LDO50_RS11080;Name=LDO50_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11080;old_locus_tag=BVI1335_1820005 NZ_CAJZAO010000093.1 Protein Homology CDS 4799 6457 . + 0 ID=cds-WP_224019703.1;Parent=gene-LDO50_RS11080;Dbxref=GenBank:WP_224019703.1;Name=WP_224019703.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487965.1;locus_tag=LDO50_RS11080;product=alkaline phosphatase family protein;protein_id=WP_224019703.1;transl_table=11 NZ_CAJZAO010000093.1 RefSeq gene 6566 7462 . - . ID=gene-LDO50_RS11085;Name=LDO50_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11085;old_locus_tag=BVI1335_1820006 NZ_CAJZAO010000093.1 Protein Homology CDS 6566 7462 . - 0 ID=cds-WP_059568481.1;Parent=gene-LDO50_RS11085;Dbxref=GenBank:WP_059568481.1;Name=WP_059568481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881006.1;locus_tag=LDO50_RS11085;product=LysR substrate-binding domain-containing protein;protein_id=WP_059568481.1;transl_table=11 NZ_CAJZAO010000093.1 RefSeq gene 7624 8475 . + . ID=gene-LDO50_RS11090;Name=LDO50_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11090;old_locus_tag=BVI1335_1820007 NZ_CAJZAO010000093.1 Protein Homology CDS 7624 8475 . + 0 ID=cds-WP_034193392.1;Parent=gene-LDO50_RS11090;Dbxref=GenBank:WP_034193392.1;Name=WP_034193392.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724147.1;locus_tag=LDO50_RS11090;product=ABC transporter permease;protein_id=WP_034193392.1;transl_table=11 NZ_CAJZAO010000093.1 RefSeq gene 8483 9065 . + . ID=gene-LDO50_RS11095;Name=LDO50_RS11095;end_range=9065,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11095;partial=true NZ_CAJZAO010000093.1 Protein Homology CDS 8483 9065 . + 0 ID=cds-WP_224019704.1;Parent=gene-LDO50_RS11095;Dbxref=GenBank:WP_224019704.1;Name=WP_224019704.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;end_range=9065,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009967586.1;locus_tag=LDO50_RS11095;partial=true;product=ABC transporter ATP-binding protein;protein_id=WP_224019704.1;transl_table=11 ##sequence-region NZ_CAJZAO010000094.1 1 39788 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000094.1 RefSeq region 1 39788 . + . ID=NZ_CAJZAO010000094.1:1..39788;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_183 NZ_CAJZAO010000094.1 RefSeq gene 460 1677 . + . ID=gene-LDO50_RS11100;Name=LDO50_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11100;old_locus_tag=BVI1335_1830001 NZ_CAJZAO010000094.1 Protein Homology CDS 460 1677 . + 0 ID=cds-WP_011885506.1;Parent=gene-LDO50_RS11100;Dbxref=GenBank:WP_011885506.1;Name=WP_011885506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331593.1;locus_tag=LDO50_RS11100;product=DUF2863 family protein;protein_id=WP_011885506.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 1877 2713 . + . ID=gene-LDO50_RS11105;Name=LDO50_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11105;old_locus_tag=BVI1335_1830002 NZ_CAJZAO010000094.1 Protein Homology CDS 1877 2713 . + 0 ID=cds-WP_011885507.1;Parent=gene-LDO50_RS11105;Dbxref=GenBank:WP_011885507.1;Name=WP_011885507.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657462.1;locus_tag=LDO50_RS11105;product=response regulator transcription factor;protein_id=WP_011885507.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 2790 3464 . + . ID=gene-LDO50_RS11110;Name=LDO50_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11110;old_locus_tag=BVI1335_1830003 NZ_CAJZAO010000094.1 Protein Homology CDS 2790 3464 . + 0 ID=cds-WP_043291379.1;Parent=gene-LDO50_RS11110;Dbxref=GenBank:WP_043291379.1;Name=WP_043291379.1;Ontology_term=GO:0000041,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transition metal ion transport|0000041||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600792.1;locus_tag=LDO50_RS11110;product=energy-coupling factor ABC transporter permease;protein_id=WP_043291379.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 3587 4234 . + . ID=gene-LDO50_RS11115;Name=LDO50_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11115;old_locus_tag=BVI1335_1830004 NZ_CAJZAO010000094.1 Protein Homology CDS 3587 4234 . + 0 ID=cds-WP_011885509.1;Parent=gene-LDO50_RS11115;Dbxref=GenBank:WP_011885509.1;Name=WP_011885509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364302.1;locus_tag=LDO50_RS11115;product=BspC domain-containing protein;protein_id=WP_011885509.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 4319 5473 . - . ID=gene-LDO50_RS11120;Name=LDO50_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11120;old_locus_tag=BVI1335_1830005 NZ_CAJZAO010000094.1 Protein Homology CDS 4319 5473 . - 0 ID=cds-WP_059696086.1;Parent=gene-LDO50_RS11120;Dbxref=GenBank:WP_059696086.1;Name=WP_059696086.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213020.1;locus_tag=LDO50_RS11120;product=M14 family metallopeptidase;protein_id=WP_059696086.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 5559 6341 . - . ID=gene-LDO50_RS11125;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=LDO50_RS11125;old_locus_tag=BVI1335_1830006 NZ_CAJZAO010000094.1 Protein Homology CDS 5559 6341 . - 0 ID=cds-WP_014723345.1;Parent=gene-LDO50_RS11125;Dbxref=GenBank:WP_014723345.1;Name=WP_014723345.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331598.1;locus_tag=LDO50_RS11125;product=peroxide stress protein YaaA;protein_id=WP_014723345.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 6399 6896 . + . ID=gene-LDO50_RS11130;Name=LDO50_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11130;old_locus_tag=BVI1335_1830007 NZ_CAJZAO010000094.1 Protein Homology CDS 6399 6896 . + 0 ID=cds-WP_011885512.1;Parent=gene-LDO50_RS11130;Dbxref=GenBank:WP_011885512.1;Name=WP_011885512.1;Ontology_term=GO:0004521,GO:0005515;gbkey=CDS;go_function=RNA endonuclease activity|0004521||IEA,protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545805.1;locus_tag=LDO50_RS11130;product=putative toxin-antitoxin system toxin component%2C PIN family;protein_id=WP_011885512.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 6930 8102 . + . ID=gene-LDO50_RS11135;Name=LDO50_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11135;old_locus_tag=BVI1335_1830008 NZ_CAJZAO010000094.1 Protein Homology CDS 6930 8102 . + 0 ID=cds-WP_014723347.1;Parent=gene-LDO50_RS11135;Dbxref=GenBank:WP_014723347.1;Name=WP_014723347.1;Ontology_term=GO:0008483,GO:0016740;gbkey=CDS;go_function=transaminase activity|0008483||IEA,transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025129.1;locus_tag=LDO50_RS11135;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_014723347.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 8144 8800 . - . ID=gene-LDO50_RS11140;Name=LDO50_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11140;old_locus_tag=BVI1335_1830009 NZ_CAJZAO010000094.1 Protein Homology CDS 8144 8800 . - 0 ID=cds-WP_014723348.1;Parent=gene-LDO50_RS11140;Dbxref=GenBank:WP_014723348.1;Name=WP_014723348.1;Ontology_term=GO:0006749,GO:0043295;gbkey=CDS;go_function=glutathione binding|0043295||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398820.1;locus_tag=LDO50_RS11140;product=glutathione S-transferase family protein;protein_id=WP_014723348.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 9002 9793 . + . ID=gene-LDO50_RS11145;Name=LDO50_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11145;old_locus_tag=BVI1335_1830010 NZ_CAJZAO010000094.1 Protein Homology CDS 9002 9793 . + 0 ID=cds-WP_011885515.1;Parent=gene-LDO50_RS11145;Dbxref=GenBank:WP_011885515.1;Name=WP_011885515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196422.1;locus_tag=LDO50_RS11145;product=oxepin-CoA hydrolase%2C alternative type;protein_id=WP_011885515.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 9949 10641 . + . ID=gene-LDO50_RS11150;Name=LDO50_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11150;old_locus_tag=BVI1335_1830011 NZ_CAJZAO010000094.1 Protein Homology CDS 9949 10641 . + 0 ID=cds-WP_059474991.1;Parent=gene-LDO50_RS11150;Dbxref=GenBank:WP_059474991.1;Name=WP_059474991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723350.1;locus_tag=LDO50_RS11150;product=glutathione binding-like protein;protein_id=WP_059474991.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 10687 11163 . - . ID=gene-LDO50_RS11155;Name=LDO50_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11155;old_locus_tag=BVI1335_1830013 NZ_CAJZAO010000094.1 Protein Homology CDS 10687 11163 . - 0 ID=cds-WP_011885517.1;Parent=gene-LDO50_RS11155;Dbxref=GenBank:WP_011885517.1;Name=WP_011885517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398817.1;locus_tag=LDO50_RS11155;product=MaoC family dehydratase;protein_id=WP_011885517.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 11160 11621 . - . ID=gene-LDO50_RS11160;Name=LDO50_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11160;old_locus_tag=BVI1335_1830014 NZ_CAJZAO010000094.1 Protein Homology CDS 11160 11621 . - 0 ID=cds-WP_034194072.1;Parent=gene-LDO50_RS11160;Dbxref=GenBank:WP_034194072.1;Name=WP_034194072.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364310.1;locus_tag=LDO50_RS11160;product=MaoC family dehydratase;protein_id=WP_034194072.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 11656 12789 . - . ID=gene-LDO50_RS11165;Name=LDO50_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11165;old_locus_tag=BVI1335_1830015 NZ_CAJZAO010000094.1 Protein Homology CDS 11656 12789 . - 0 ID=cds-WP_069224264.1;Parent=gene-LDO50_RS11165;Dbxref=GenBank:WP_069224264.1;Name=WP_069224264.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723352.1;locus_tag=LDO50_RS11165;product=acyl-CoA dehydrogenase family protein;protein_id=WP_069224264.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 12809 14005 . - . ID=gene-LDO50_RS11170;Name=LDO50_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11170;old_locus_tag=BVI1335_1830016 NZ_CAJZAO010000094.1 Protein Homology CDS 12809 14005 . - 0 ID=cds-WP_014723353.1;Parent=gene-LDO50_RS11170;Dbxref=GenBank:WP_014723353.1;Name=WP_014723353.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763850.1;locus_tag=LDO50_RS11170;product=acyl-CoA dehydrogenase family protein;protein_id=WP_014723353.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 14061 14489 . - . ID=gene-LDO50_RS11175;Name=LDO50_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11175;old_locus_tag=BVI1335_1830017 NZ_CAJZAO010000094.1 Protein Homology CDS 14061 14489 . - 0 ID=cds-WP_059474989.1;Parent=gene-LDO50_RS11175;Dbxref=GenBank:WP_059474989.1;Name=WP_059474989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185972.1;locus_tag=LDO50_RS11175;product=DUF1178 family protein;protein_id=WP_059474989.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 14625 15215 . - . ID=gene-LDO50_RS11180;Name=LDO50_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11180;old_locus_tag=BVI1335_1830018 NZ_CAJZAO010000094.1 Protein Homology CDS 14625 15215 . - 0 ID=cds-WP_011885522.1;Parent=gene-LDO50_RS11180;Dbxref=GenBank:WP_011885522.1;Name=WP_011885522.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908710.1;locus_tag=LDO50_RS11180;product=NUDIX domain-containing protein;protein_id=WP_011885522.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 15257 15553 . - . ID=gene-LDO50_RS11185;Name=LDO50_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11185;old_locus_tag=BVI1335_1830019 NZ_CAJZAO010000094.1 Protein Homology CDS 15257 15553 . - 0 ID=cds-WP_011885523.1;Parent=gene-LDO50_RS11185;Dbxref=GenBank:WP_011885523.1;Name=WP_011885523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601582.1;locus_tag=LDO50_RS11185;product=DUF2818 family protein;protein_id=WP_011885523.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 15553 17016 . - . ID=gene-LDO50_RS11190;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=LDO50_RS11190;old_locus_tag=BVI1335_1830020 NZ_CAJZAO010000094.1 Protein Homology CDS 15553 17016 . - 0 ID=cds-WP_175464266.1;Parent=gene-LDO50_RS11190;Dbxref=GenBank:WP_175464266.1;Name=WP_175464266.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885524.1;locus_tag=LDO50_RS11190;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_175464266.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 17053 18543 . - . ID=gene-LDO50_RS11195;Name=LDO50_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11195;old_locus_tag=BVI1335_1830021 NZ_CAJZAO010000094.1 Protein Homology CDS 17053 18543 . - 0 ID=cds-WP_011885525.1;Parent=gene-LDO50_RS11195;Dbxref=GenBank:WP_011885525.1;Name=WP_011885525.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025113.1;locus_tag=LDO50_RS11195;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_011885525.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 18560 20614 . - . ID=gene-LDO50_RS11200;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=LDO50_RS11200;old_locus_tag=BVI1335_1830022 NZ_CAJZAO010000094.1 Protein Homology CDS 18560 20614 . - 0 ID=cds-WP_011885526.1;Parent=gene-LDO50_RS11200;Dbxref=GenBank:WP_011885526.1;Name=WP_011885526.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185765.1;locus_tag=LDO50_RS11200;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_011885526.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 20632 20937 . - . ID=gene-LDO50_RS11205;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=LDO50_RS11205;old_locus_tag=BVI1335_1830023 NZ_CAJZAO010000094.1 Protein Homology CDS 20632 20937 . - 0 ID=cds-WP_011885527.1;Parent=gene-LDO50_RS11205;Dbxref=GenBank:WP_011885527.1;Name=WP_011885527.1;gbkey=CDS;gene=nuoK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007588140.1;locus_tag=LDO50_RS11205;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_011885527.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 20956 21606 . - . ID=gene-LDO50_RS11210;Name=LDO50_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11210;old_locus_tag=BVI1335_1830024 NZ_CAJZAO010000094.1 Protein Homology CDS 20956 21606 . - 0 ID=cds-WP_224019705.1;Parent=gene-LDO50_RS11210;Dbxref=GenBank:WP_224019705.1;Name=WP_224019705.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885528.1;locus_tag=LDO50_RS11210;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_224019705.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 21721 22209 . - . ID=gene-LDO50_RS11215;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=LDO50_RS11215;old_locus_tag=BVI1335_1830025 NZ_CAJZAO010000094.1 Protein Homology CDS 21721 22209 . - 0 ID=cds-WP_011885529.1;Parent=gene-LDO50_RS11215;Dbxref=GenBank:WP_011885529.1;Name=WP_011885529.1;Ontology_term=GO:0016651,GO:0051539;gbkey=CDS;gene=nuoI;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885529.1;locus_tag=LDO50_RS11215;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_011885529.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 22225 23292 . - . ID=gene-LDO50_RS11220;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=LDO50_RS11220;old_locus_tag=BVI1335_1830026 NZ_CAJZAO010000094.1 Protein Homology CDS 22225 23292 . - 0 ID=cds-WP_011885530.1;Parent=gene-LDO50_RS11220;Dbxref=GenBank:WP_011885530.1;Name=WP_011885530.1;Ontology_term=GO:0016020;gbkey=CDS;gene=nuoH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896507.1;locus_tag=LDO50_RS11220;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_011885530.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 23293 25623 . - . ID=gene-LDO50_RS11225;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=LDO50_RS11225;old_locus_tag=BVI1335_1830027 NZ_CAJZAO010000094.1 Protein Homology CDS 23293 25623 . - 0 ID=cds-WP_011885531.1;Parent=gene-LDO50_RS11225;Dbxref=GenBank:WP_011885531.1;Name=WP_011885531.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213012.1;locus_tag=LDO50_RS11225;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_011885531.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 25708 27018 . - . ID=gene-LDO50_RS11230;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=LDO50_RS11230;old_locus_tag=BVI1335_1830028 NZ_CAJZAO010000094.1 Protein Homology CDS 25708 27018 . - 0 ID=cds-WP_011885532.1;Parent=gene-LDO50_RS11230;Dbxref=GenBank:WP_011885532.1;Name=WP_011885532.1;Ontology_term=GO:0010181,GO:0050136,GO:0051287,GO:0051539;gbkey=CDS;gene=nuoF;go_function=FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896505.1;locus_tag=LDO50_RS11230;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_011885532.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 27015 27500 . - . ID=gene-LDO50_RS11235;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=LDO50_RS11235;old_locus_tag=BVI1335_1830029 NZ_CAJZAO010000094.1 Protein Homology CDS 27015 27500 . - 0 ID=cds-WP_006478266.1;Parent=gene-LDO50_RS11235;Dbxref=GenBank:WP_006478266.1;Name=WP_006478266.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401393.1;locus_tag=LDO50_RS11235;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_006478266.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 27681 28934 . - . ID=gene-LDO50_RS11240;Name=LDO50_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11240;old_locus_tag=BVI1335_1830030 NZ_CAJZAO010000094.1 Protein Homology CDS 27681 28934 . - 0 ID=cds-WP_011885533.1;Parent=gene-LDO50_RS11240;Dbxref=GenBank:WP_011885533.1;Name=WP_011885533.1;Ontology_term=GO:0016651,GO:0048038,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,quinone binding|0048038||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014191758.1;locus_tag=LDO50_RS11240;product=NADH-quinone oxidoreductase subunit D;protein_id=WP_011885533.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 28944 29546 . - . ID=gene-LDO50_RS11245;Name=LDO50_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11245;old_locus_tag=BVI1335_1830031 NZ_CAJZAO010000094.1 Protein Homology CDS 28944 29546 . - 0 ID=cds-WP_011885534.1;Parent=gene-LDO50_RS11245;Dbxref=GenBank:WP_011885534.1;Name=WP_011885534.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018442918.1;locus_tag=LDO50_RS11245;product=NADH-quinone oxidoreductase subunit C;protein_id=WP_011885534.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 29568 30047 . - . ID=gene-LDO50_RS11250;Name=LDO50_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11250;old_locus_tag=BVI1335_1830032 NZ_CAJZAO010000094.1 Protein Homology CDS 29568 30047 . - 0 ID=cds-WP_006398799.1;Parent=gene-LDO50_RS11250;Dbxref=GenBank:WP_006398799.1;Name=WP_006398799.1;Ontology_term=GO:0008137,GO:0016655,GO:0048038,GO:0051539,GO:0005886,GO:0045271;gbkey=CDS;go_component=plasma membrane|0005886||IEA,respiratory chain complex I|0045271||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186402.1;locus_tag=LDO50_RS11250;product=NuoB/complex I 20 kDa subunit family protein;protein_id=WP_006398799.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 30111 30470 . - . ID=gene-LDO50_RS11255;Name=LDO50_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11255;old_locus_tag=BVI1335_1830033 NZ_CAJZAO010000094.1 Protein Homology CDS 30111 30470 . - 0 ID=cds-WP_011885535.1;Parent=gene-LDO50_RS11255;Dbxref=GenBank:WP_011885535.1;Name=WP_011885535.1;Ontology_term=GO:0016655,GO:0048038,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013339872.1;locus_tag=LDO50_RS11255;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_011885535.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 30625 30709 . - . ID=gene-LDO50_RS11260;Name=LDO50_RS11260;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS11260;old_locus_tag=BVI1335_TRNA25 NZ_CAJZAO010000094.1 tRNAscan-SE tRNA 30625 30709 . - . ID=rna-LDO50_RS11260;Parent=gene-LDO50_RS11260;anticodon=(pos:complement(30673..30675));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS11260;product=tRNA-Leu NZ_CAJZAO010000094.1 tRNAscan-SE exon 30625 30709 . - . ID=exon-LDO50_RS11260-1;Parent=rna-LDO50_RS11260;anticodon=(pos:complement(30673..30675));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS11260;product=tRNA-Leu NZ_CAJZAO010000094.1 RefSeq gene 30821 31207 . - . ID=gene-LDO50_RS11265;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=LDO50_RS11265;old_locus_tag=BVI1335_1830034 NZ_CAJZAO010000094.1 Protein Homology CDS 30821 31207 . - 0 ID=cds-WP_011885536.1;Parent=gene-LDO50_RS11265;Dbxref=GenBank:WP_011885536.1;Name=WP_011885536.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545815.1;locus_tag=LDO50_RS11265;product=preprotein translocase subunit SecG;protein_id=WP_011885536.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 31280 32035 . - . ID=gene-LDO50_RS11270;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=LDO50_RS11270;old_locus_tag=BVI1335_1830035 NZ_CAJZAO010000094.1 Protein Homology CDS 31280 32035 . - 0 ID=cds-WP_011885537.1;Parent=gene-LDO50_RS11270;Dbxref=GenBank:WP_011885537.1;Name=WP_011885537.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657484.1;locus_tag=LDO50_RS11270;product=triose-phosphate isomerase;protein_id=WP_011885537.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 32178 33197 . - . ID=gene-LDO50_RS11275;Name=LDO50_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11275;old_locus_tag=BVI1335_1830036 NZ_CAJZAO010000094.1 Protein Homology CDS 32178 33197 . - 0 ID=cds-WP_011885538.1;Parent=gene-LDO50_RS11275;Dbxref=GenBank:WP_011885538.1;Name=WP_011885538.1;Ontology_term=GO:0003960,GO:0048038,GO:0070402;gbkey=CDS;go_function=quinone reductase (NADPH) activity|0003960||IEA,quinone binding|0048038||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600129.1;locus_tag=LDO50_RS11275;product=NAD(P)H-quinone oxidoreductase;protein_id=WP_011885538.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 33348 35495 . - . ID=gene-LDO50_RS11280;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=LDO50_RS11280;old_locus_tag=BVI1335_1830037 NZ_CAJZAO010000094.1 Protein Homology CDS 33348 35495 . - 0 ID=cds-WP_011885539.1;Parent=gene-LDO50_RS11280;Dbxref=GenBank:WP_011885539.1;Name=WP_011885539.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410113.1;locus_tag=LDO50_RS11280;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_011885539.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 35787 36056 . - . ID=gene-LDO50_RS11285;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=LDO50_RS11285;old_locus_tag=BVI1335_1830038 NZ_CAJZAO010000094.1 Protein Homology CDS 35787 36056 . - 0 ID=cds-WP_006398792.1;Parent=gene-LDO50_RS11285;Dbxref=GenBank:WP_006398792.1;Name=WP_006398792.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401401.1;locus_tag=LDO50_RS11285;product=30S ribosomal protein S15;protein_id=WP_006398792.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 36175 37434 . - . ID=gene-LDO50_RS11290;Name=LDO50_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11290;old_locus_tag=BVI1335_1830039 NZ_CAJZAO010000094.1 Protein Homology CDS 36175 37434 . - 0 ID=cds-WP_011885540.1;Parent=gene-LDO50_RS11290;Dbxref=GenBank:WP_011885540.1;Name=WP_011885540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478259.1;locus_tag=LDO50_RS11290;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_011885540.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 37615 38127 . + . ID=gene-LDO50_RS11295;Name=LDO50_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11295;old_locus_tag=BVI1335_1830040 NZ_CAJZAO010000094.1 Protein Homology CDS 37615 38127 . + 0 ID=cds-WP_011885541.1;Parent=gene-LDO50_RS11295;Dbxref=GenBank:WP_011885541.1;Name=WP_011885541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405570.1;locus_tag=LDO50_RS11295;product=hypothetical protein;protein_id=WP_011885541.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 38512 39156 . + . ID=gene-LDO50_RS11300;Name=LDO50_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11300;old_locus_tag=BVI1335_1830042 NZ_CAJZAO010000094.1 Protein Homology CDS 38512 39156 . + 0 ID=cds-WP_014723363.1;Parent=gene-LDO50_RS11300;Dbxref=GenBank:WP_014723363.1;Name=WP_014723363.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415554.1;locus_tag=LDO50_RS11300;product=carbonic anhydrase;protein_id=WP_014723363.1;transl_table=11 NZ_CAJZAO010000094.1 RefSeq gene 39195 39788 . + . ID=gene-LDO50_RS11305;Name=LDO50_RS11305;end_range=39788,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11305;partial=true NZ_CAJZAO010000094.1 Protein Homology CDS 39195 39788 . + 0 ID=cds-WP_253074460.1;Parent=gene-LDO50_RS11305;Dbxref=GenBank:WP_253074460.1;Name=WP_253074460.1;Ontology_term=GO:1902358,GO:0015116,GO:0016020;end_range=39788,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723364.1;locus_tag=LDO50_RS11305;partial=true;product=SulP family inorganic anion transporter;protein_id=WP_253074460.1;transl_table=11 ##sequence-region NZ_CAJZAO010000095.1 1 18475 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000095.1 RefSeq region 1 18475 . + . ID=NZ_CAJZAO010000095.1:1..18475;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_184 NZ_CAJZAO010000095.1 RefSeq gene 1 224 . - . ID=gene-LDO50_RS11310;Name=LDO50_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11310;partial=true;start_range=.,1 NZ_CAJZAO010000095.1 Protein Homology CDS 1 224 . - 0 ID=cds-WP_224019706.1;Parent=gene-LDO50_RS11310;Dbxref=GenBank:WP_224019706.1;Name=WP_224019706.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411378.1;locus_tag=LDO50_RS11310;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_224019706.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000095.1 RefSeq gene 214 540 . - . ID=gene-LDO50_RS11315;Name=andAb;gbkey=Gene;gene=andAb;gene_biotype=protein_coding;locus_tag=LDO50_RS11315;old_locus_tag=BVI1335_1840002 NZ_CAJZAO010000095.1 Protein Homology CDS 214 540 . - 0 ID=cds-WP_011881496.1;Parent=gene-LDO50_RS11315;Dbxref=GenBank:WP_011881496.1;Name=WP_011881496.1;Ontology_term=GO:0009056,GO:0051537;gbkey=CDS;gene=andAb;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355916.1;locus_tag=LDO50_RS11315;product=anthranilate 1%2C2-dioxygenase ferredoxin subunit AndAb;protein_id=WP_011881496.1;transl_table=11 NZ_CAJZAO010000095.1 RefSeq gene 567 1052 . - . ID=gene-LDO50_RS11320;Name=andAd;gbkey=Gene;gene=andAd;gene_biotype=protein_coding;locus_tag=LDO50_RS11320;old_locus_tag=BVI1335_1840003 NZ_CAJZAO010000095.1 Protein Homology CDS 567 1052 . - 0 ID=cds-WP_034194948.1;Parent=gene-LDO50_RS11320;Dbxref=GenBank:WP_034194948.1;Name=WP_034194948.1;Ontology_term=GO:0009056,GO:0018618;gbkey=CDS;gene=andAd;go_function=anthranilate 1%2C2-dioxygenase (deaminating%2C decarboxylating) activity|0018618||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881495.1;locus_tag=LDO50_RS11320;product=anthranilate 1%2C2-dioxygenase small subunit AndAd;protein_id=WP_034194948.1;transl_table=11 NZ_CAJZAO010000095.1 RefSeq gene 1070 2341 . - . ID=gene-LDO50_RS11325;Name=andAc;gbkey=Gene;gene=andAc;gene_biotype=protein_coding;locus_tag=LDO50_RS11325;old_locus_tag=BVI1335_1840004 NZ_CAJZAO010000095.1 Protein Homology CDS 1070 2341 . - 0 ID=cds-WP_059895582.1;Parent=gene-LDO50_RS11325;Dbxref=GenBank:WP_059895582.1;Name=WP_059895582.1;Ontology_term=GO:0009056,GO:0018618;gbkey=CDS;gene=andAc;go_function=anthranilate 1%2C2-dioxygenase (deaminating%2C decarboxylating) activity|0018618||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412648.1;locus_tag=LDO50_RS11325;product=anthranilate 1%2C2-dioxygenase large subunit AndAc;protein_id=WP_059895582.1;transl_table=11 NZ_CAJZAO010000095.1 RefSeq gene 2552 3508 . + . ID=gene-LDO50_RS11330;Name=andR;gbkey=Gene;gene=andR;gene_biotype=protein_coding;locus_tag=LDO50_RS11330;old_locus_tag=BVI1335_1840006 NZ_CAJZAO010000095.1 Protein Homology CDS 2552 3508 . + 0 ID=cds-WP_059624049.1;Parent=gene-LDO50_RS11330;Dbxref=GenBank:WP_059624049.1;Name=WP_059624049.1;Ontology_term=GO:0009056,GO:0003700,GO:0043565;gbkey=CDS;gene=andR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338516.1;locus_tag=LDO50_RS11330;product=anthranilate 1%2C2-dioxygenase regulatory protein AndR;protein_id=WP_059624049.1;transl_table=11 NZ_CAJZAO010000095.1 RefSeq gene 3774 4664 . - . ID=gene-LDO50_RS11335;Name=LDO50_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11335;old_locus_tag=BVI1335_1840008 NZ_CAJZAO010000095.1 Protein Homology CDS 3774 4664 . - 0 ID=cds-WP_011881492.1;Parent=gene-LDO50_RS11335;Dbxref=GenBank:WP_011881492.1;Name=WP_011881492.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881492.1;locus_tag=LDO50_RS11335;product=LysR family transcriptional regulator;protein_id=WP_011881492.1;transl_table=11 NZ_CAJZAO010000095.1 RefSeq gene 4756 5889 . + . ID=gene-LDO50_RS11340;Name=LDO50_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11340;old_locus_tag=BVI1335_1840009 NZ_CAJZAO010000095.1 Protein Homology CDS 4756 5889 . + 0 ID=cds-WP_059895584.1;Parent=gene-LDO50_RS11340;Dbxref=GenBank:WP_059895584.1;Name=WP_059895584.1;Ontology_term=GO:0018849,GO:0018850,GO:0030145;gbkey=CDS;go_function=muconate cycloisomerase activity|0018849||IEA,chloromuconate cycloisomerase activity|0018850||IEA,manganese ion binding|0030145||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853729.1;locus_tag=LDO50_RS11340;product=muconate/chloromuconate family cycloisomerase;protein_id=WP_059895584.1;transl_table=11 NZ_CAJZAO010000095.1 RefSeq gene 5941 6843 . + . ID=gene-LDO50_RS11345;Name=catA;gbkey=Gene;gene=catA;gene_biotype=protein_coding;locus_tag=LDO50_RS11345;old_locus_tag=BVI1335_1840010 NZ_CAJZAO010000095.1 Protein Homology CDS 5941 6843 . + 0 ID=cds-WP_011881490.1;Parent=gene-LDO50_RS11345;Dbxref=GenBank:WP_011881490.1;Name=WP_011881490.1;Ontology_term=GO:0019615,GO:0005506,GO:0018576;gbkey=CDS;gene=catA;go_function=iron ion binding|0005506||IEA,catechol 1%2C2-dioxygenase activity|0018576||IEA;go_process=catechol catabolic process%2C ortho-cleavage|0019615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365533.1;locus_tag=LDO50_RS11345;product=catechol 1%2C2-dioxygenase;protein_id=WP_011881490.1;transl_table=11 NZ_CAJZAO010000095.1 RefSeq gene 6887 7177 . + . ID=gene-LDO50_RS11350;Name=catC;gbkey=Gene;gene=catC;gene_biotype=protein_coding;locus_tag=LDO50_RS11350;old_locus_tag=BVI1335_1840011 NZ_CAJZAO010000095.1 Protein Homology CDS 6887 7177 . + 0 ID=cds-WP_014724579.1;Parent=gene-LDO50_RS11350;Dbxref=GenBank:WP_014724579.1;Name=WP_014724579.1;Ontology_term=GO:0042952,GO:0016159;gbkey=CDS;gene=catC;go_function=muconolactone delta-isomerase activity|0016159||IEA;go_process=beta-ketoadipate pathway|0042952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881489.1;locus_tag=LDO50_RS11350;product=muconolactone Delta-isomerase;protein_id=WP_014724579.1;transl_table=11 NZ_CAJZAO010000095.1 RefSeq gene 7272 8117 . - . ID=gene-LDO50_RS11355;Name=LDO50_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11355;old_locus_tag=BVI1335_1840012 NZ_CAJZAO010000095.1 Protein Homology CDS 7272 8117 . - 0 ID=cds-WP_014724578.1;Parent=gene-LDO50_RS11355;Dbxref=GenBank:WP_014724578.1;Name=WP_014724578.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881488.1;locus_tag=LDO50_RS11355;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_014724578.1;transl_table=11 NZ_CAJZAO010000095.1 RefSeq gene 8204 9097 . + . ID=gene-LDO50_RS11360;Name=LDO50_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11360;old_locus_tag=BVI1335_1840013 NZ_CAJZAO010000095.1 Protein Homology CDS 8204 9097 . + 0 ID=cds-WP_175658247.1;Parent=gene-LDO50_RS11360;Dbxref=GenBank:WP_175658247.1;Name=WP_175658247.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484342.1;locus_tag=LDO50_RS11360;product=LysR family transcriptional regulator;protein_id=WP_175658247.1;transl_table=11 NZ_CAJZAO010000095.1 RefSeq gene 9274 9678 . + . ID=gene-LDO50_RS11365;Name=LDO50_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11365;old_locus_tag=BVI1335_1840014 NZ_CAJZAO010000095.1 Protein Homology CDS 9274 9678 . + 0 ID=cds-WP_011881486.1;Parent=gene-LDO50_RS11365;Dbxref=GenBank:WP_011881486.1;Name=WP_011881486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881486.1;locus_tag=LDO50_RS11365;product=DUF2471 family protein;protein_id=WP_011881486.1;transl_table=11 NZ_CAJZAO010000095.1 RefSeq gene 9988 12021 . - . ID=gene-LDO50_RS11370;Name=LDO50_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11370;old_locus_tag=BVI1335_1840016 NZ_CAJZAO010000095.1 Protein Homology CDS 9988 12021 . - 0 ID=cds-WP_176043493.1;Parent=gene-LDO50_RS11370;Dbxref=GenBank:WP_176043493.1;Name=WP_176043493.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004544654.1;locus_tag=LDO50_RS11370;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_176043493.1;transl_table=11 NZ_CAJZAO010000095.1 RefSeq gene 12098 13183 . + . ID=gene-LDO50_RS11375;Name=LDO50_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11375;old_locus_tag=BVI1335_1840017 NZ_CAJZAO010000095.1 Protein Homology CDS 12098 13183 . + 0 ID=cds-WP_224019707.1;Parent=gene-LDO50_RS11375;Dbxref=GenBank:WP_224019707.1;Name=WP_224019707.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496027.1;locus_tag=LDO50_RS11375;product=AraC family transcriptional regulator;protein_id=WP_224019707.1;transl_table=11 NZ_CAJZAO010000095.1 RefSeq gene 13468 13896 . - . ID=gene-LDO50_RS11380;Name=LDO50_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11380;old_locus_tag=BVI1335_1840018 NZ_CAJZAO010000095.1 Protein Homology CDS 13468 13896 . - 0 ID=cds-WP_224019708.1;Parent=gene-LDO50_RS11380;Dbxref=GenBank:WP_224019708.1;Name=WP_224019708.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338528.1;locus_tag=LDO50_RS11380;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_224019708.1;transl_table=11 NZ_CAJZAO010000095.1 RefSeq gene 14007 14906 . + . ID=gene-LDO50_RS11385;Name=LDO50_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11385;old_locus_tag=BVI1335_1840019 NZ_CAJZAO010000095.1 Protein Homology CDS 14007 14906 . + 0 ID=cds-WP_011881482.1;Parent=gene-LDO50_RS11385;Dbxref=GenBank:WP_011881482.1;Name=WP_011881482.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881482.1;locus_tag=LDO50_RS11385;product=LysR family transcriptional regulator;protein_id=WP_011881482.1;transl_table=11 NZ_CAJZAO010000095.1 RefSeq gene 15021 15452 . + . ID=gene-LDO50_RS11390;Name=LDO50_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11390;old_locus_tag=BVI1335_1840020 NZ_CAJZAO010000095.1 Protein Homology CDS 15021 15452 . + 0 ID=cds-WP_041494082.1;Parent=gene-LDO50_RS11390;Dbxref=GenBank:WP_041494082.1;Name=WP_041494082.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496031.1;locus_tag=LDO50_RS11390;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_041494082.1;transl_table=11 NZ_CAJZAO010000095.1 RefSeq gene 15521 16612 . + . ID=gene-LDO50_RS11395;Name=LDO50_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11395;old_locus_tag=BVI1335_1840021 NZ_CAJZAO010000095.1 Protein Homology CDS 15521 16612 . + 0 ID=cds-WP_034194939.1;Parent=gene-LDO50_RS11395;Dbxref=GenBank:WP_034194939.1;Name=WP_034194939.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750286.1;locus_tag=LDO50_RS11395;product=HlyD family secretion protein;protein_id=WP_034194939.1;transl_table=11 NZ_CAJZAO010000095.1 RefSeq gene 16626 18200 . + . ID=gene-LDO50_RS11400;Name=LDO50_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11400;old_locus_tag=BVI1335_1840022 NZ_CAJZAO010000095.1 Protein Homology CDS 16626 18200 . + 0 ID=cds-WP_011881479.1;Parent=gene-LDO50_RS11400;Dbxref=GenBank:WP_011881479.1;Name=WP_011881479.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338532.1;locus_tag=LDO50_RS11400;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_011881479.1;transl_table=11 NZ_CAJZAO010000095.1 RefSeq pseudogene 18217 18475 . + . ID=gene-LDO50_RS11405;Name=LDO50_RS11405;end_range=18475,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS11405;partial=true;pseudo=true NZ_CAJZAO010000095.1 Protein Homology CDS 18217 18475 . + 0 ID=cds-LDO50_RS11405;Parent=gene-LDO50_RS11405;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=18475,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479568.1;locus_tag=LDO50_RS11405;partial=true;product=efflux transporter outer membrane subunit;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000096.1 1 4341 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000096.1 RefSeq region 1 4341 . + . ID=NZ_CAJZAO010000096.1:1..4341;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_185 NZ_CAJZAO010000096.1 RefSeq gene 26 1444 . - . ID=gene-LDO50_RS11410;Name=ahcY;gbkey=Gene;gene=ahcY;gene_biotype=protein_coding;locus_tag=LDO50_RS11410;old_locus_tag=BVI1335_1850001 NZ_CAJZAO010000096.1 Protein Homology CDS 26 1444 . - 0 ID=cds-WP_011882922.1;Parent=gene-LDO50_RS11410;Dbxref=GenBank:WP_011882922.1;Name=WP_011882922.1;Ontology_term=GO:0006730,GO:0004013;gbkey=CDS;gene=ahcY;go_function=adenosylhomocysteinase activity|0004013||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401380.1;locus_tag=LDO50_RS11410;product=adenosylhomocysteinase;protein_id=WP_011882922.1;transl_table=11 NZ_CAJZAO010000096.1 cmsearch riboswitch 1479 1594 . - . ID=id-NZ_CAJZAO010000096.1:1479..1594;Dbxref=RFAM:RF01057;Note=S-adenosyl-L-homocysteine riboswitch;bound_moiety=S-adenosyl-L-homocysteine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAO010000096.1 RefSeq gene 1689 2423 . - . ID=gene-LDO50_RS11415;Name=LDO50_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11415;old_locus_tag=BVI1335_1850003 NZ_CAJZAO010000096.1 Protein Homology CDS 1689 2423 . - 0 ID=cds-WP_011882921.1;Parent=gene-LDO50_RS11415;Dbxref=GenBank:WP_011882921.1;Name=WP_011882921.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023809.1;locus_tag=LDO50_RS11415;product=RNA polymerase sigma factor FliA;protein_id=WP_011882921.1;transl_table=11 NZ_CAJZAO010000096.1 RefSeq gene 2446 3264 . - . ID=gene-LDO50_RS11420;Name=LDO50_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11420;old_locus_tag=BVI1335_1850004 NZ_CAJZAO010000096.1 Protein Homology CDS 2446 3264 . - 0 ID=cds-WP_175949371.1;Parent=gene-LDO50_RS11420;Dbxref=GenBank:WP_175949371.1;Name=WP_175949371.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198637.1;locus_tag=LDO50_RS11420;product=MinD/ParA family ATP-binding protein;protein_id=WP_175949371.1;transl_table=11 NZ_CAJZAO010000096.1 RefSeq gene 3257 4341 . - . ID=gene-LDO50_RS11425;Name=flhF;end_range=4341,.;gbkey=Gene;gene=flhF;gene_biotype=protein_coding;locus_tag=LDO50_RS11425;old_locus_tag=BVI1335_1850005;partial=true NZ_CAJZAO010000096.1 Protein Homology CDS 3257 4341 . - 2 ID=cds-WP_224019709.1;Parent=gene-LDO50_RS11425;Dbxref=GenBank:WP_224019709.1;Name=WP_224019709.1;Ontology_term=GO:0044781,GO:0003924,GO:0005525;end_range=4341,.;gbkey=CDS;gene=flhF;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546704.1;locus_tag=LDO50_RS11425;partial=true;product=flagellar biosynthesis protein FlhF;protein_id=WP_224019709.1;transl_table=11 ##sequence-region NZ_CAJZAO010000097.1 1 3862 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000097.1 RefSeq region 1 3862 . + . ID=NZ_CAJZAO010000097.1:1..3862;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_186 NZ_CAJZAO010000097.1 RefSeq gene 290 1708 . + . ID=gene-LDO50_RS11430;Name=LDO50_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11430;old_locus_tag=BVI1335_1860002 NZ_CAJZAO010000097.1 Protein Homology CDS 290 1708 . + 0 ID=cds-WP_045577689.1;Parent=gene-LDO50_RS11430;Dbxref=GenBank:WP_045577689.1;Name=WP_045577689.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880869.1;locus_tag=LDO50_RS11430;product=MFS transporter;protein_id=WP_045577689.1;transl_table=11 NZ_CAJZAO010000097.1 RefSeq gene 1970 3226 . + . ID=gene-LDO50_RS11435;Name=LDO50_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11435;old_locus_tag=BVI1335_1860003 NZ_CAJZAO010000097.1 Protein Homology CDS 1970 3226 . + 0 ID=cds-WP_209149246.1;Parent=gene-LDO50_RS11435;Dbxref=GenBank:WP_209149246.1;Name=WP_209149246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480524.1;locus_tag=LDO50_RS11435;product=hypothetical protein;protein_id=WP_209149246.1;transl_table=11 NZ_CAJZAO010000097.1 RefSeq gene 3237 3862 . - . ID=gene-LDO50_RS11440;Name=LDO50_RS11440;end_range=3862,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11440;old_locus_tag=BVI1335_1860004;partial=true NZ_CAJZAO010000097.1 Protein Homology CDS 3237 3862 . - 2 ID=cds-WP_253074461.1;Parent=gene-LDO50_RS11440;Dbxref=GenBank:WP_253074461.1;Name=WP_253074461.1;Ontology_term=GO:0008658;end_range=3862,.;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753731.1;locus_tag=LDO50_RS11440;partial=true;product=penicillin-binding transpeptidase domain-containing protein;protein_id=WP_253074461.1;transl_table=11 ##sequence-region NZ_CAJZAO010000098.1 1 15106 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000098.1 RefSeq region 1 15106 . + . ID=NZ_CAJZAO010000098.1:1..15106;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_187 NZ_CAJZAO010000098.1 RefSeq pseudogene 1 358 . + . ID=gene-LDO50_RS11445;Name=LDO50_RS11445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS11445;old_locus_tag=BVI1335_1870001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000098.1 Protein Homology CDS 1 358 . + 1 ID=cds-LDO50_RS11445;Parent=gene-LDO50_RS11445;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496679.1;locus_tag=LDO50_RS11445;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000098.1 RefSeq gene 650 1009 . + . ID=gene-LDO50_RS11450;Name=LDO50_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11450;old_locus_tag=BVI1335_1870002 NZ_CAJZAO010000098.1 Protein Homology CDS 650 1009 . + 0 ID=cds-WP_200091809.1;Parent=gene-LDO50_RS11450;Dbxref=GenBank:WP_200091809.1;Name=WP_200091809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544726.1;locus_tag=LDO50_RS11450;product=COG4315 family predicted lipoprotein;protein_id=WP_200091809.1;transl_table=11 NZ_CAJZAO010000098.1 RefSeq gene 1059 1574 . + . ID=gene-LDO50_RS11455;Name=LDO50_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11455;old_locus_tag=BVI1335_1870003 NZ_CAJZAO010000098.1 Protein Homology CDS 1059 1574 . + 0 ID=cds-WP_059735729.1;Parent=gene-LDO50_RS11455;Dbxref=GenBank:WP_059735729.1;Name=WP_059735729.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400979.1;locus_tag=LDO50_RS11455;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_059735729.1;transl_table=11 NZ_CAJZAO010000098.1 RefSeq gene 1574 2365 . + . ID=gene-LDO50_RS11460;Name=LDO50_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11460;old_locus_tag=BVI1335_1870004 NZ_CAJZAO010000098.1 Protein Homology CDS 1574 2365 . + 0 ID=cds-WP_224019710.1;Parent=gene-LDO50_RS11460;Dbxref=GenBank:WP_224019710.1;Name=WP_224019710.1;Ontology_term=GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722544.1;locus_tag=LDO50_RS11460;product=anti-sigma factor family protein;protein_id=WP_224019710.1;transl_table=11 NZ_CAJZAO010000098.1 RefSeq gene 2397 2816 . + . ID=gene-LDO50_RS11465;Name=LDO50_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11465;old_locus_tag=BVI1335_1870005 NZ_CAJZAO010000098.1 Protein Homology CDS 2397 2816 . + 0 ID=cds-WP_060082277.1;Parent=gene-LDO50_RS11465;Dbxref=GenBank:WP_060082277.1;Name=WP_060082277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883498.1;locus_tag=LDO50_RS11465;product=hypothetical protein;protein_id=WP_060082277.1;transl_table=11 NZ_CAJZAO010000098.1 RefSeq gene 2813 3445 . + . ID=gene-LDO50_RS11470;Name=LDO50_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11470;old_locus_tag=BVI1335_1870006 NZ_CAJZAO010000098.1 Protein Homology CDS 2813 3445 . + 0 ID=cds-WP_059889008.1;Parent=gene-LDO50_RS11470;Dbxref=GenBank:WP_059889008.1;Name=WP_059889008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897912.1;locus_tag=LDO50_RS11470;product=LolA family protein;protein_id=WP_059889008.1;transl_table=11 NZ_CAJZAO010000098.1 RefSeq gene 3469 3978 . + . ID=gene-LDO50_RS11475;Name=LDO50_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11475;old_locus_tag=BVI1335_1870007 NZ_CAJZAO010000098.1 Protein Homology CDS 3469 3978 . + 0 ID=cds-WP_011883502.1;Parent=gene-LDO50_RS11475;Dbxref=GenBank:WP_011883502.1;Name=WP_011883502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753916.1;locus_tag=LDO50_RS11475;product=SRPBCC family protein;protein_id=WP_011883502.1;transl_table=11 NZ_CAJZAO010000098.1 RefSeq gene 4353 4646 . + . ID=gene-LDO50_RS11480;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=LDO50_RS11480;old_locus_tag=BVI1335_1870009 NZ_CAJZAO010000098.1 Protein Homology CDS 4353 4646 . + 0 ID=cds-WP_004186661.1;Parent=gene-LDO50_RS11480;Dbxref=GenBank:WP_004186661.1;Name=WP_004186661.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=groES;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544732.1;locus_tag=LDO50_RS11480;product=co-chaperone GroES;protein_id=WP_004186661.1;transl_table=11 NZ_CAJZAO010000098.1 RefSeq gene 4693 6333 . + . ID=gene-LDO50_RS11485;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=LDO50_RS11485;old_locus_tag=BVI1335_1870010 NZ_CAJZAO010000098.1 Protein Homology CDS 4693 6333 . + 0 ID=cds-WP_011883504.1;Parent=gene-LDO50_RS11485;Dbxref=GenBank:WP_011883504.1;Name=WP_011883504.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753915.1;locus_tag=LDO50_RS11485;product=chaperonin GroEL;protein_id=WP_011883504.1;transl_table=11 NZ_CAJZAO010000098.1 RefSeq gene 6482 7348 . - . ID=gene-LDO50_RS11490;Name=LDO50_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11490;old_locus_tag=BVI1335_1870011 NZ_CAJZAO010000098.1 Protein Homology CDS 6482 7348 . - 0 ID=cds-WP_011883505.1;Parent=gene-LDO50_RS11490;Dbxref=GenBank:WP_011883505.1;Name=WP_011883505.1;Ontology_term=GO:0009228,GO:0009229,GO:0005524,GO:0008902,GO:0008972;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA,thiamine diphosphate biosynthetic process|0009229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753914.1;locus_tag=LDO50_RS11490;product=hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;protein_id=WP_011883505.1;transl_table=11 NZ_CAJZAO010000098.1 RefSeq gene 7604 7774 . + . ID=gene-LDO50_RS11495;Name=LDO50_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11495;old_locus_tag=BVI1335_1870012 NZ_CAJZAO010000098.1 Protein Homology CDS 7604 7774 . + 0 ID=cds-WP_004186709.1;Parent=gene-LDO50_RS11495;Dbxref=GenBank:WP_004186709.1;Name=WP_004186709.1;Ontology_term=GO:0043448,GO:0005506,GO:0009055;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=alkane catabolic process|0043448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013436118.1;locus_tag=LDO50_RS11495;product=rubredoxin;protein_id=WP_004186709.1;transl_table=11 NZ_CAJZAO010000098.1 RefSeq pseudogene 7879 8797 . + . ID=gene-LDO50_RS11500;Name=LDO50_RS11500;end_range=8797,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS11500;old_locus_tag=BVI1335_1870013;partial=true;pseudo=true NZ_CAJZAO010000098.1 Protein Homology CDS 7879 8797 . + 0 ID=cds-LDO50_RS11500;Parent=gene-LDO50_RS11500;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=8797,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406352.1;locus_tag=LDO50_RS11500;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CAJZAO010000098.1 RefSeq gene 8691 9026 . - . ID=gene-LDO50_RS11505;Name=LDO50_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11505;old_locus_tag=BVI1335_1870014 NZ_CAJZAO010000098.1 Protein Homology CDS 8691 9026 . - 0 ID=cds-WP_224019713.1;Parent=gene-LDO50_RS11505;Dbxref=GenBank:WP_224019713.1;Name=WP_224019713.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012354.6;locus_tag=LDO50_RS11505;product=LysR family transcriptional regulator;protein_id=WP_224019713.1;transl_table=11 NZ_CAJZAO010000098.1 RefSeq gene 9164 10027 . + . ID=gene-LDO50_RS11510;Name=LDO50_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11510;old_locus_tag=BVI1335_1870015 NZ_CAJZAO010000098.1 Protein Homology CDS 9164 10027 . + 0 ID=cds-WP_059548651.1;Parent=gene-LDO50_RS11510;Dbxref=GenBank:WP_059548651.1;Name=WP_059548651.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880493.1;locus_tag=LDO50_RS11510;product=SDR family oxidoreductase;protein_id=WP_059548651.1;transl_table=11 NZ_CAJZAO010000098.1 RefSeq gene 10564 10968 . + . ID=gene-LDO50_RS11515;Name=LDO50_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11515;old_locus_tag=BVI1335_1870016 NZ_CAJZAO010000098.1 Protein Homology CDS 10564 10968 . + 0 ID=cds-WP_011880494.1;Parent=gene-LDO50_RS11515;Dbxref=GenBank:WP_011880494.1;Name=WP_011880494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880494.1;locus_tag=LDO50_RS11515;product=cupin domain-containing protein;protein_id=WP_011880494.1;transl_table=11 NZ_CAJZAO010000098.1 RefSeq gene 11215 12090 . - . ID=gene-LDO50_RS11520;Name=LDO50_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11520;old_locus_tag=BVI1335_1870017 NZ_CAJZAO010000098.1 Protein Homology CDS 11215 12090 . - 0 ID=cds-WP_140994972.1;Parent=gene-LDO50_RS11520;Dbxref=GenBank:WP_140994972.1;Name=WP_140994972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372377.1;locus_tag=LDO50_RS11520;product=aldo/keto reductase family oxidoreductase;protein_id=WP_140994972.1;transl_table=11 NZ_CAJZAO010000098.1 RefSeq gene 12191 13093 . + . ID=gene-LDO50_RS11525;Name=LDO50_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11525;old_locus_tag=BVI1335_1870018 NZ_CAJZAO010000098.1 Protein Homology CDS 12191 13093 . + 0 ID=cds-WP_059548647.1;Parent=gene-LDO50_RS11525;Dbxref=GenBank:WP_059548647.1;Name=WP_059548647.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880496.1;locus_tag=LDO50_RS11525;product=LysR family transcriptional regulator;protein_id=WP_059548647.1;transl_table=11 NZ_CAJZAO010000098.1 RefSeq gene 13479 14723 . - . ID=gene-LDO50_RS11530;Name=LDO50_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11530;old_locus_tag=BVI1335_1870020 NZ_CAJZAO010000098.1 Protein Homology CDS 13479 14723 . - 0 ID=cds-WP_224019711.1;Parent=gene-LDO50_RS11530;Dbxref=GenBank:WP_224019711.1;Name=WP_224019711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880497.1;locus_tag=LDO50_RS11530;product=arsenic transporter;protein_id=WP_224019711.1;transl_table=11 NZ_CAJZAO010000098.1 RefSeq gene 14761 15106 . - . ID=gene-LDO50_RS11535;Name=LDO50_RS11535;end_range=15106,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11535;old_locus_tag=BVI1335_1870021;partial=true NZ_CAJZAO010000098.1 Protein Homology CDS 14761 15106 . - 1 ID=cds-WP_224019712.1;Parent=gene-LDO50_RS11535;Dbxref=GenBank:WP_224019712.1;Name=WP_224019712.1;Ontology_term=GO:0055085,GO:0022857;end_range=15106,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726154.1;locus_tag=LDO50_RS11535;partial=true;product=MFS transporter;protein_id=WP_224019712.1;transl_table=11 ##sequence-region NZ_CAJZAO010000099.1 1 4472 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000099.1 RefSeq region 1 4472 . + . ID=NZ_CAJZAO010000099.1:1..4472;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_188 NZ_CAJZAO010000099.1 RefSeq gene 1 1881 . + . ID=gene-LDO50_RS11540;Name=LDO50_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11540;old_locus_tag=BVI1335_1880001;partial=true;start_range=.,1 NZ_CAJZAO010000099.1 Protein Homology CDS 1 1881 . + 0 ID=cds-WP_224019714.1;Parent=gene-LDO50_RS11540;Dbxref=GenBank:WP_224019714.1;Name=WP_224019714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881400.1;locus_tag=LDO50_RS11540;partial=true;product=VTT domain-containing protein;protein_id=WP_224019714.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000099.1 RefSeq gene 1926 2435 . + . ID=gene-LDO50_RS11545;Name=LDO50_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11545;old_locus_tag=BVI1335_1880002 NZ_CAJZAO010000099.1 Protein Homology CDS 1926 2435 . + 0 ID=cds-WP_060121630.1;Parent=gene-LDO50_RS11545;Dbxref=GenBank:WP_060121630.1;Name=WP_060121630.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660260.1;locus_tag=LDO50_RS11545;product=GNAT family N-acetyltransferase;protein_id=WP_060121630.1;transl_table=11 NZ_CAJZAO010000099.1 RefSeq gene 2443 3396 . - . ID=gene-LDO50_RS11550;Name=LDO50_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11550;old_locus_tag=BVI1335_1880003 NZ_CAJZAO010000099.1 Protein Homology CDS 2443 3396 . - 0 ID=cds-WP_046425929.1;Parent=gene-LDO50_RS11550;Dbxref=GenBank:WP_046425929.1;Name=WP_046425929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603841.1;locus_tag=LDO50_RS11550;product=hypothetical protein;protein_id=WP_046425929.1;transl_table=11 NZ_CAJZAO010000099.1 RefSeq gene 3455 3577 . - . ID=gene-LDO50_RS30830;Name=LDO50_RS30830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30830;old_locus_tag=BVI1335_1880004 NZ_CAJZAO010000099.1 Protein Homology CDS 3455 3577 . - 0 ID=cds-WP_006479692.1;Parent=gene-LDO50_RS30830;Dbxref=GenBank:WP_006479692.1;Name=WP_006479692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330456.1;locus_tag=LDO50_RS30830;product=hypothetical protein;protein_id=WP_006479692.1;transl_table=11 NZ_CAJZAO010000099.1 RefSeq gene 4091 4472 . + . ID=gene-LDO50_RS11555;Name=LDO50_RS11555;end_range=4472,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11555;partial=true NZ_CAJZAO010000099.1 Protein Homology CDS 4091 4472 . + 0 ID=cds-WP_224019715.1;Parent=gene-LDO50_RS11555;Dbxref=GenBank:WP_224019715.1;Name=WP_224019715.1;end_range=4472,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760142.1;locus_tag=LDO50_RS11555;partial=true;product=YbfB/YjiJ family MFS transporter;protein_id=WP_224019715.1;transl_table=11 ##sequence-region NZ_CAJZAO010000100.1 1 18426 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000100.1 RefSeq region 1 18426 . + . ID=NZ_CAJZAO010000100.1:1..18426;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_189 NZ_CAJZAO010000100.1 RefSeq pseudogene 1 338 . + . ID=gene-LDO50_RS11560;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=LDO50_RS11560;old_locus_tag=BVI1335_1890001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000100.1 Protein Homology CDS 1 338 . + 2 ID=cds-LDO50_RS11560;Parent=gene-LDO50_RS11560;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012081251.1;locus_tag=LDO50_RS11560;partial=true;product=elongation factor Tu;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000100.1 RefSeq gene 398 473 . + . ID=gene-LDO50_RS11565;Name=LDO50_RS11565;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS11565;old_locus_tag=BVI1335_TRNA20 NZ_CAJZAO010000100.1 tRNAscan-SE tRNA 398 473 . + . ID=rna-LDO50_RS11565;Parent=gene-LDO50_RS11565;anticodon=(pos:431..433);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS11565;product=tRNA-Trp NZ_CAJZAO010000100.1 tRNAscan-SE exon 398 473 . + . ID=exon-LDO50_RS11565-1;Parent=rna-LDO50_RS11565;anticodon=(pos:431..433);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS11565;product=tRNA-Trp NZ_CAJZAO010000100.1 RefSeq gene 516 896 . + . ID=gene-LDO50_RS11570;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=LDO50_RS11570;old_locus_tag=BVI1335_1890002 NZ_CAJZAO010000100.1 Protein Homology CDS 516 896 . + 0 ID=cds-WP_059475040.1;Parent=gene-LDO50_RS11570;Dbxref=GenBank:WP_059475040.1;Name=WP_059475040.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734344.1;locus_tag=LDO50_RS11570;product=preprotein translocase subunit SecE;protein_id=WP_059475040.1;transl_table=11 NZ_CAJZAO010000100.1 RefSeq gene 898 1455 . + . ID=gene-LDO50_RS11575;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=LDO50_RS11575;old_locus_tag=BVI1335_1890003 NZ_CAJZAO010000100.1 Protein Homology CDS 898 1455 . + 0 ID=cds-WP_006400672.1;Parent=gene-LDO50_RS11575;Dbxref=GenBank:WP_006400672.1;Name=WP_006400672.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013434764.1;locus_tag=LDO50_RS11575;product=transcription termination/antitermination protein NusG;protein_id=WP_006400672.1;transl_table=11 NZ_CAJZAO010000100.1 RefSeq gene 1596 2027 . + . ID=gene-LDO50_RS11580;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=LDO50_RS11580;old_locus_tag=BVI1335_1890004 NZ_CAJZAO010000100.1 Protein Homology CDS 1596 2027 . + 0 ID=cds-WP_006753591.1;Parent=gene-LDO50_RS11580;Dbxref=GenBank:WP_006753591.1;Name=WP_006753591.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012251786.1;locus_tag=LDO50_RS11580;product=50S ribosomal protein L11;protein_id=WP_006753591.1;transl_table=11 NZ_CAJZAO010000100.1 RefSeq gene 2028 2726 . + . ID=gene-LDO50_RS11585;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=LDO50_RS11585;old_locus_tag=BVI1335_1890005 NZ_CAJZAO010000100.1 Protein Homology CDS 2028 2726 . + 0 ID=cds-WP_011882997.1;Parent=gene-LDO50_RS11585;Dbxref=GenBank:WP_011882997.1;Name=WP_011882997.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407020.1;locus_tag=LDO50_RS11585;product=50S ribosomal protein L1;protein_id=WP_011882997.1;transl_table=11 NZ_CAJZAO010000100.1 RefSeq gene 3031 3528 . + . ID=gene-LDO50_RS11590;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=LDO50_RS11590;old_locus_tag=BVI1335_1890007 NZ_CAJZAO010000100.1 Protein Homology CDS 3031 3528 . + 0 ID=cds-WP_014722280.1;Parent=gene-LDO50_RS11590;Dbxref=GenBank:WP_014722280.1;Name=WP_014722280.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898361.1;locus_tag=LDO50_RS11590;product=50S ribosomal protein L10;protein_id=WP_014722280.1;transl_table=11 NZ_CAJZAO010000100.1 RefSeq gene 3592 3963 . + . ID=gene-LDO50_RS11595;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=LDO50_RS11595;old_locus_tag=BVI1335_1890008 NZ_CAJZAO010000100.1 Protein Homology CDS 3592 3963 . + 0 ID=cds-WP_011882999.1;Parent=gene-LDO50_RS11595;Dbxref=GenBank:WP_011882999.1;Name=WP_011882999.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029839.1;locus_tag=LDO50_RS11595;product=50S ribosomal protein L7/L12;protein_id=WP_011882999.1;transl_table=11 NZ_CAJZAO010000100.1 RefSeq gene 4340 8446 . + . ID=gene-LDO50_RS11600;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=LDO50_RS11600;old_locus_tag=BVI1335_1890009 NZ_CAJZAO010000100.1 Protein Homology CDS 4340 8446 . + 0 ID=cds-WP_011883000.1;Parent=gene-LDO50_RS11600;Dbxref=GenBank:WP_011883000.1;Name=WP_011883000.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029840.1;locus_tag=LDO50_RS11600;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_011883000.1;transl_table=11 NZ_CAJZAO010000100.1 RefSeq gene 8468 12709 . + . ID=gene-LDO50_RS11605;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=LDO50_RS11605;old_locus_tag=BVI1335_1890010 NZ_CAJZAO010000100.1 Protein Homology CDS 8468 12709 . + 0 ID=cds-WP_011883001.1;Parent=gene-LDO50_RS11605;Dbxref=GenBank:WP_011883001.1;Name=WP_011883001.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493357.1;locus_tag=LDO50_RS11605;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_011883001.1;transl_table=11 NZ_CAJZAO010000100.1 RefSeq gene 12951 14801 . + . ID=gene-LDO50_RS11610;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=LDO50_RS11610;old_locus_tag=BVI1335_1890012 NZ_CAJZAO010000100.1 Protein Homology CDS 12951 14801 . + 0 ID=cds-WP_011883002.1;Parent=gene-LDO50_RS11610;Dbxref=GenBank:WP_011883002.1;Name=WP_011883002.1;Ontology_term=GO:0006310,GO:0009432,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696366.1;locus_tag=LDO50_RS11610;product=DNA helicase RecQ;protein_id=WP_011883002.1;transl_table=11 NZ_CAJZAO010000100.1 RefSeq gene 15073 15453 . + . ID=gene-LDO50_RS11615;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=LDO50_RS11615;old_locus_tag=BVI1335_1890013 NZ_CAJZAO010000100.1 Protein Homology CDS 15073 15453 . + 0 ID=cds-WP_006400662.1;Parent=gene-LDO50_RS11615;Dbxref=GenBank:WP_006400662.1;Name=WP_006400662.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006998493.1;locus_tag=LDO50_RS11615;product=30S ribosomal protein S12;protein_id=WP_006400662.1;transl_table=11 NZ_CAJZAO010000100.1 RefSeq gene 15626 16096 . + . ID=gene-LDO50_RS11620;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=LDO50_RS11620;old_locus_tag=BVI1335_1890014 NZ_CAJZAO010000100.1 Protein Homology CDS 15626 16096 . + 0 ID=cds-WP_006477195.1;Parent=gene-LDO50_RS11620;Dbxref=GenBank:WP_006477195.1;Name=WP_006477195.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008649176.1;locus_tag=LDO50_RS11620;product=30S ribosomal protein S7;protein_id=WP_006477195.1;transl_table=11 NZ_CAJZAO010000100.1 RefSeq gene 16219 18321 . + . ID=gene-LDO50_RS11625;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=LDO50_RS11625;old_locus_tag=BVI1335_1890015 NZ_CAJZAO010000100.1 Protein Homology CDS 16219 18321 . + 0 ID=cds-WP_011883003.1;Parent=gene-LDO50_RS11625;Dbxref=GenBank:WP_011883003.1;Name=WP_011883003.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482929.1;locus_tag=LDO50_RS11625;product=elongation factor G;protein_id=WP_011883003.1;transl_table=11 NZ_CAJZAO010000100.1 RefSeq pseudogene 18364 18426 . + . ID=gene-LDO50_RS31460;Name=LDO50_RS31460;end_range=18426,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31460;partial=true;pseudo=true NZ_CAJZAO010000100.1 Protein Homology CDS 18364 18426 . + 0 ID=cds-LDO50_RS31460;Parent=gene-LDO50_RS31460;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=18426,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012081251.1;locus_tag=LDO50_RS31460;partial=true;product=GTP-binding protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000101.1 1 72706 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000101.1 RefSeq region 1 72706 . + . ID=NZ_CAJZAO010000101.1:1..72706;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_19 NZ_CAJZAO010000101.1 RefSeq gene 1 249 . - . ID=gene-LDO50_RS11635;Name=LDO50_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11635;partial=true;start_range=.,1 NZ_CAJZAO010000101.1 Protein Homology CDS 1 249 . - 0 ID=cds-WP_224019717.1;Parent=gene-LDO50_RS11635;Dbxref=GenBank:WP_224019717.1;Name=WP_224019717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403686.1;locus_tag=LDO50_RS11635;partial=true;product=SDR family oxidoreductase;protein_id=WP_224019717.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 812 1159 . + . ID=gene-LDO50_RS11640;Name=LDO50_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11640;old_locus_tag=BVI1335_190003 NZ_CAJZAO010000101.1 Protein Homology CDS 812 1159 . + 0 ID=cds-WP_034193484.1;Parent=gene-LDO50_RS11640;Dbxref=GenBank:WP_034193484.1;Name=WP_034193484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882083.1;locus_tag=LDO50_RS11640;product=DUF3564 family protein;protein_id=WP_034193484.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 1536 3440 . + . ID=gene-LDO50_RS11645;Name=LDO50_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11645;old_locus_tag=BVI1335_190006 NZ_CAJZAO010000101.1 Protein Homology CDS 1536 3440 . + 0 ID=cds-WP_059734513.1;Parent=gene-LDO50_RS11645;Dbxref=GenBank:WP_059734513.1;Name=WP_059734513.1;Ontology_term=GO:0009252,GO:0051301,GO:0071555,GO:0008658,GO:0008955,GO:0009002,GO:0016787,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479178.1;locus_tag=LDO50_RS11645;product=peptidoglycan D%2CD-transpeptidase FtsI family protein;protein_id=WP_059734513.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 3860 5575 . - . ID=gene-LDO50_RS11650;Name=LDO50_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11650;old_locus_tag=BVI1335_190007 NZ_CAJZAO010000101.1 Protein Homology CDS 3860 5575 . - 0 ID=cds-WP_059474304.1;Parent=gene-LDO50_RS11650;Dbxref=GenBank:WP_059474304.1;Name=WP_059474304.1;Ontology_term=GO:0006812,GO:0055085,GO:1902600,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365925.1;locus_tag=LDO50_RS11650;product=cation:proton antiporter domain-containing protein;protein_id=WP_059474304.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 5780 7204 . - . ID=gene-LDO50_RS11655;Name=LDO50_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11655;old_locus_tag=BVI1335_190009 NZ_CAJZAO010000101.1 Protein Homology CDS 5780 7204 . - 0 ID=cds-WP_059461088.1;Parent=gene-LDO50_RS11655;Dbxref=GenBank:WP_059461088.1;Name=WP_059461088.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547847.1;locus_tag=LDO50_RS11655;product=c-type cytochrome;protein_id=WP_059461088.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 7201 8979 . - . ID=gene-LDO50_RS11660;Name=LDO50_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11660;old_locus_tag=BVI1335_190010 NZ_CAJZAO010000101.1 Protein Homology CDS 7201 8979 . - 0 ID=cds-WP_034193481.1;Parent=gene-LDO50_RS11660;Dbxref=GenBank:WP_034193481.1;Name=WP_034193481.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759726.1;locus_tag=LDO50_RS11660;product=GMC family oxidoreductase;protein_id=WP_034193481.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 8979 9719 . - . ID=gene-LDO50_RS11665;Name=LDO50_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11665;old_locus_tag=BVI1335_190011 NZ_CAJZAO010000101.1 Protein Homology CDS 8979 9719 . - 0 ID=cds-WP_212183973.1;Parent=gene-LDO50_RS11665;Dbxref=GenBank:WP_212183973.1;Name=WP_212183973.1;Ontology_term=GO:0008873,GO:0008875;gbkey=CDS;go_function=gluconate 2-dehydrogenase activity|0008873||IEA,gluconate dehydrogenase activity|0008875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415138.1;locus_tag=LDO50_RS11665;product=gluconate 2-dehydrogenase subunit 3 family protein;protein_id=WP_212183973.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 10252 10668 . - . ID=gene-LDO50_RS11670;Name=LDO50_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11670;old_locus_tag=BVI1335_190013 NZ_CAJZAO010000101.1 Protein Homology CDS 10252 10668 . - 0 ID=cds-WP_059734515.1;Parent=gene-LDO50_RS11670;Dbxref=GenBank:WP_059734515.1;Name=WP_059734515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882077.1;locus_tag=LDO50_RS11670;product=DUF3995 domain-containing protein;protein_id=WP_059734515.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 10996 12111 . + . ID=gene-LDO50_RS11675;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=LDO50_RS11675;old_locus_tag=BVI1335_190012 NZ_CAJZAO010000101.1 Protein Homology CDS 10996 12111 . + 0 ID=cds-WP_224019718.1;Parent=gene-LDO50_RS11675;Dbxref=GenBank:WP_224019718.1;Name=WP_224019718.1;Ontology_term=GO:0042853,GO:0000286;gbkey=CDS;gene=ald;go_function=alanine dehydrogenase activity|0000286||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493090.1;locus_tag=LDO50_RS11675;product=alanine dehydrogenase;protein_id=WP_224019718.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 12178 12570 . - . ID=gene-LDO50_RS11680;Name=LDO50_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11680;old_locus_tag=BVI1335_190014 NZ_CAJZAO010000101.1 Protein Homology CDS 12178 12570 . - 0 ID=cds-WP_046428490.1;Parent=gene-LDO50_RS11680;Dbxref=GenBank:WP_046428490.1;Name=WP_046428490.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759722.1;locus_tag=LDO50_RS11680;product=TraR/DksA family transcriptional regulator;protein_id=WP_046428490.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 12629 12871 . - . ID=gene-LDO50_RS11685;Name=LDO50_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11685 NZ_CAJZAO010000101.1 GeneMarkS-2+ CDS 12629 12871 . - 0 ID=cds-WP_043292200.1;Parent=gene-LDO50_RS11685;Dbxref=GenBank:WP_043292200.1;Name=WP_043292200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS11685;product=hypothetical protein;protein_id=WP_043292200.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 12906 13079 . + . ID=gene-LDO50_RS11690;Name=LDO50_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11690;old_locus_tag=BVI1335_190015 NZ_CAJZAO010000101.1 Protein Homology CDS 12906 13079 . + 0 ID=cds-WP_014724999.1;Parent=gene-LDO50_RS11690;Dbxref=GenBank:WP_014724999.1;Name=WP_014724999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759721.1;locus_tag=LDO50_RS11690;product=hypothetical protein;protein_id=WP_014724999.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 13232 14404 . - . ID=gene-LDO50_RS11695;Name=LDO50_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11695;old_locus_tag=BVI1335_190016 NZ_CAJZAO010000101.1 Protein Homology CDS 13232 14404 . - 0 ID=cds-WP_052691546.1;Parent=gene-LDO50_RS11695;Dbxref=GenBank:WP_052691546.1;Name=WP_052691546.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882074.1;locus_tag=LDO50_RS11695;product=glycosyltransferase family 4 protein;protein_id=WP_052691546.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 14559 15965 . - . ID=gene-LDO50_RS11700;Name=LDO50_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11700;old_locus_tag=BVI1335_190017 NZ_CAJZAO010000101.1 Protein Homology CDS 14559 15965 . - 0 ID=cds-WP_059463835.1;Parent=gene-LDO50_RS11700;Dbxref=GenBank:WP_059463835.1;Name=WP_059463835.1;Ontology_term=GO:0016780;gbkey=CDS;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547855.1;locus_tag=LDO50_RS11700;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_059463835.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 15977 16759 . - . ID=gene-LDO50_RS11705;Name=LDO50_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11705;old_locus_tag=BVI1335_190018 NZ_CAJZAO010000101.1 Protein Homology CDS 15977 16759 . - 0 ID=cds-WP_011882072.1;Parent=gene-LDO50_RS11705;Dbxref=GenBank:WP_011882072.1;Name=WP_011882072.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882072.1;locus_tag=LDO50_RS11705;product=Crp/Fnr family transcriptional regulator;protein_id=WP_011882072.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 17717 18457 . + . ID=gene-LDO50_RS11710;Name=LDO50_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11710;old_locus_tag=BVI1335_190020 NZ_CAJZAO010000101.1 Protein Homology CDS 17717 18457 . + 0 ID=cds-WP_011882070.1;Parent=gene-LDO50_RS11710;Dbxref=GenBank:WP_011882070.1;Name=WP_011882070.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882070.1;locus_tag=LDO50_RS11710;product=Crp/Fnr family transcriptional regulator;protein_id=WP_011882070.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 18626 18877 . + . ID=gene-LDO50_RS11715;Name=LDO50_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11715;old_locus_tag=BVI1335_190023 NZ_CAJZAO010000101.1 Protein Homology CDS 18626 18877 . + 0 ID=cds-WP_011882069.1;Parent=gene-LDO50_RS11715;Dbxref=GenBank:WP_011882069.1;Name=WP_011882069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522820.1;locus_tag=LDO50_RS11715;product=acyl carrier protein;protein_id=WP_011882069.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 18874 20070 . + . ID=gene-LDO50_RS11720;Name=LDO50_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11720;old_locus_tag=BVI1335_190022 NZ_CAJZAO010000101.1 Protein Homology CDS 18874 20070 . + 0 ID=cds-WP_014725002.1;Parent=gene-LDO50_RS11720;Dbxref=GenBank:WP_014725002.1;Name=WP_014725002.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658656.1;locus_tag=LDO50_RS11720;product=acyl-CoA dehydrogenase family protein;protein_id=WP_014725002.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 20067 21047 . + . ID=gene-LDO50_RS11725;Name=LDO50_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11725;old_locus_tag=BVI1335_190024 NZ_CAJZAO010000101.1 Protein Homology CDS 20067 21047 . + 0 ID=cds-WP_011882067.1;Parent=gene-LDO50_RS11725;Dbxref=GenBank:WP_011882067.1;Name=WP_011882067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547858.1;locus_tag=LDO50_RS11725;product=amino acid--[acyl-carrier-protein] ligase;protein_id=WP_011882067.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 21044 22099 . + . ID=gene-LDO50_RS11730;Name=LDO50_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11730;old_locus_tag=BVI1335_190025 NZ_CAJZAO010000101.1 Protein Homology CDS 21044 22099 . + 0 ID=cds-WP_059567839.1;Parent=gene-LDO50_RS11730;Dbxref=GenBank:WP_059567839.1;Name=WP_059567839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365914.1;locus_tag=LDO50_RS11730;product=DUF1839 family protein;protein_id=WP_059567839.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 22129 24570 . + . ID=gene-LDO50_RS11735;Name=LDO50_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11735;old_locus_tag=BVI1335_190026 NZ_CAJZAO010000101.1 Protein Homology CDS 22129 24570 . + 0 ID=cds-WP_224019725.1;Parent=gene-LDO50_RS11735;Dbxref=GenBank:WP_224019725.1;Name=WP_224019725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882065.1;locus_tag=LDO50_RS11735;product=glycosyl hydrolase 2 galactose-binding domain-containing protein;protein_id=WP_224019725.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 24616 26007 . - . ID=gene-LDO50_RS11740;Name=LDO50_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11740;old_locus_tag=BVI1335_190027 NZ_CAJZAO010000101.1 Protein Homology CDS 24616 26007 . - 0 ID=cds-WP_011882064.1;Parent=gene-LDO50_RS11740;Dbxref=GenBank:WP_011882064.1;Name=WP_011882064.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217119.1;locus_tag=LDO50_RS11740;product=sigma-54 dependent transcriptional regulator;protein_id=WP_011882064.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 26697 27929 . - . ID=gene-LDO50_RS11745;Name=LDO50_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11745;old_locus_tag=BVI1335_190028 NZ_CAJZAO010000101.1 Protein Homology CDS 26697 27929 . - 0 ID=cds-WP_014725006.1;Parent=gene-LDO50_RS11745;Dbxref=GenBank:WP_014725006.1;Name=WP_014725006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725006.1;locus_tag=LDO50_RS11745;product=glycosyltransferase family 4 protein;protein_id=WP_014725006.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 28208 28792 . + . ID=gene-LDO50_RS11750;Name=LDO50_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11750;old_locus_tag=BVI1335_190029 NZ_CAJZAO010000101.1 Protein Homology CDS 28208 28792 . + 0 ID=cds-WP_224019719.1;Parent=gene-LDO50_RS11750;Dbxref=GenBank:WP_224019719.1;Name=WP_224019719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882061.1;locus_tag=LDO50_RS11750;product=drug:proton antiporter;protein_id=WP_224019719.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 28789 30309 . + . ID=gene-LDO50_RS11755;Name=LDO50_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11755;old_locus_tag=BVI1335_190031 NZ_CAJZAO010000101.1 Protein Homology CDS 28789 30309 . + 0 ID=cds-WP_011882060.1;Parent=gene-LDO50_RS11755;Dbxref=GenBank:WP_011882060.1;Name=WP_011882060.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725008.1;locus_tag=LDO50_RS11755;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_011882060.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 30399 31631 . - . ID=gene-LDO50_RS11760;Name=LDO50_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11760;old_locus_tag=BVI1335_190032 NZ_CAJZAO010000101.1 Protein Homology CDS 30399 31631 . - 0 ID=cds-WP_181709451.1;Parent=gene-LDO50_RS11760;Dbxref=GenBank:WP_181709451.1;Name=WP_181709451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882059.1;locus_tag=LDO50_RS11760;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_181709451.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 31728 32873 . - . ID=gene-LDO50_RS11765;Name=LDO50_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11765;old_locus_tag=BVI1335_190033 NZ_CAJZAO010000101.1 Protein Homology CDS 31728 32873 . - 0 ID=cds-WP_181709450.1;Parent=gene-LDO50_RS11765;Dbxref=GenBank:WP_181709450.1;Name=WP_181709450.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882058.1;locus_tag=LDO50_RS11765;product=acyltransferase family protein;protein_id=WP_181709450.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 33094 34518 . - . ID=gene-LDO50_RS11770;Name=LDO50_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11770;old_locus_tag=BVI1335_190035 NZ_CAJZAO010000101.1 Protein Homology CDS 33094 34518 . - 0 ID=cds-WP_011882057.1;Parent=gene-LDO50_RS11770;Dbxref=GenBank:WP_011882057.1;Name=WP_011882057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882057.1;locus_tag=LDO50_RS11770;product=DUF6418 domain-containing protein;protein_id=WP_011882057.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 34667 36982 . - . ID=gene-LDO50_RS11775;Name=LDO50_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11775;old_locus_tag=BVI1335_190036 NZ_CAJZAO010000101.1 Protein Homology CDS 34667 36982 . - 0 ID=cds-WP_059567781.1;Parent=gene-LDO50_RS11775;Dbxref=GenBank:WP_059567781.1;Name=WP_059567781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882056.1;locus_tag=LDO50_RS11775;product=GNVR domain-containing protein;protein_id=WP_059567781.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 37573 38754 . + . ID=gene-LDO50_RS11780;Name=LDO50_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11780;old_locus_tag=BVI1335_190038 NZ_CAJZAO010000101.1 Protein Homology CDS 37573 38754 . + 0 ID=cds-WP_176317133.1;Parent=gene-LDO50_RS11780;Dbxref=GenBank:WP_176317133.1;Name=WP_176317133.1;Ontology_term=GO:0015774,GO:0015159,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=polysaccharide transmembrane transporter activity|0015159||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882055.1;locus_tag=LDO50_RS11780;product=polysaccharide biosynthesis/export family protein;protein_id=WP_176317133.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 38881 40134 . - . ID=gene-LDO50_RS11785;Name=LDO50_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11785;old_locus_tag=BVI1335_190039 NZ_CAJZAO010000101.1 Protein Homology CDS 38881 40134 . - 0 ID=cds-WP_034193471.1;Parent=gene-LDO50_RS11785;Dbxref=GenBank:WP_034193471.1;Name=WP_034193471.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882054.1;locus_tag=LDO50_RS11785;product=oligosaccharide flippase family protein;protein_id=WP_034193471.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 40172 41362 . - . ID=gene-LDO50_RS11790;Name=LDO50_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11790;old_locus_tag=BVI1335_190040 NZ_CAJZAO010000101.1 Protein Homology CDS 40172 41362 . - 0 ID=cds-WP_011882053.1;Parent=gene-LDO50_RS11790;Dbxref=GenBank:WP_011882053.1;Name=WP_011882053.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882053.1;locus_tag=LDO50_RS11790;product=glycosyltransferase family 4 protein;protein_id=WP_011882053.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 41718 43493 . - . ID=gene-LDO50_RS11795;Name=LDO50_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11795;old_locus_tag=BVI1335_190041 NZ_CAJZAO010000101.1 Protein Homology CDS 41718 43493 . - 0 ID=cds-WP_059694396.1;Parent=gene-LDO50_RS11795;Dbxref=GenBank:WP_059694396.1;Name=WP_059694396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725016.1;locus_tag=LDO50_RS11795;product=serine aminopeptidase domain-containing protein;protein_id=WP_059694396.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 44510 46711 . + . ID=gene-LDO50_RS11800;Name=LDO50_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11800;old_locus_tag=BVI1335_190043 NZ_CAJZAO010000101.1 Protein Homology CDS 44510 46711 . + 0 ID=cds-WP_059694398.1;Parent=gene-LDO50_RS11800;Dbxref=GenBank:WP_059694398.1;Name=WP_059694398.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217133.1;locus_tag=LDO50_RS11800;product=glycoside hydrolase family 3 C-terminal domain-containing protein;protein_id=WP_059694398.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 46907 48475 . - . ID=gene-LDO50_RS11805;Name=LDO50_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11805;old_locus_tag=BVI1335_190044 NZ_CAJZAO010000101.1 Protein Homology CDS 46907 48475 . - 0 ID=cds-WP_224019720.1;Parent=gene-LDO50_RS11805;Dbxref=GenBank:WP_224019720.1;Name=WP_224019720.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882050.1;locus_tag=LDO50_RS11805;product=methyl-accepting chemotaxis protein;protein_id=WP_224019720.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 48802 50079 . - . ID=gene-LDO50_RS11810;Name=LDO50_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11810;old_locus_tag=BVI1335_190046 NZ_CAJZAO010000101.1 Protein Homology CDS 48802 50079 . - 0 ID=cds-WP_059694356.1;Parent=gene-LDO50_RS11810;Dbxref=GenBank:WP_059694356.1;Name=WP_059694356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694949.1;locus_tag=LDO50_RS11810;product=ATP-binding protein;protein_id=WP_059694356.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 50063 50821 . - . ID=gene-LDO50_RS11815;Name=LDO50_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11815;old_locus_tag=BVI1335_190047 NZ_CAJZAO010000101.1 Protein Homology CDS 50063 50821 . - 0 ID=cds-WP_011882047.1;Parent=gene-LDO50_RS11815;Dbxref=GenBank:WP_011882047.1;Name=WP_011882047.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017773364.1;locus_tag=LDO50_RS11815;product=response regulator;protein_id=WP_011882047.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 51149 52432 . + . ID=gene-LDO50_RS11820;Name=LDO50_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11820;old_locus_tag=BVI1335_190048 NZ_CAJZAO010000101.1 Protein Homology CDS 51149 52432 . + 0 ID=cds-WP_059694358.1;Parent=gene-LDO50_RS11820;Dbxref=GenBank:WP_059694358.1;Name=WP_059694358.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882046.1;locus_tag=LDO50_RS11820;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_059694358.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 52445 55657 . + . ID=gene-LDO50_RS11825;Name=LDO50_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11825;old_locus_tag=BVI1335_190049 NZ_CAJZAO010000101.1 Protein Homology CDS 52445 55657 . + 0 ID=cds-WP_224019721.1;Parent=gene-LDO50_RS11825;Dbxref=GenBank:WP_224019721.1;Name=WP_224019721.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549151.1;locus_tag=LDO50_RS11825;product=efflux RND transporter permease subunit;protein_id=WP_224019721.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 55654 57081 . + . ID=gene-LDO50_RS11830;Name=LDO50_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11830;old_locus_tag=BVI1335_190050 NZ_CAJZAO010000101.1 Protein Homology CDS 55654 57081 . + 0 ID=cds-WP_224019722.1;Parent=gene-LDO50_RS11830;Dbxref=GenBank:WP_224019722.1;Name=WP_224019722.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725022.1;locus_tag=LDO50_RS11830;product=efflux transporter outer membrane subunit;protein_id=WP_224019722.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 57152 58057 . - . ID=gene-LDO50_RS11835;Name=LDO50_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11835;old_locus_tag=BVI1335_190051 NZ_CAJZAO010000101.1 Protein Homology CDS 57152 58057 . - 0 ID=cds-WP_045578078.1;Parent=gene-LDO50_RS11835;Dbxref=GenBank:WP_045578078.1;Name=WP_045578078.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882043.1;locus_tag=LDO50_RS11835;product=LysR family transcriptional regulator;protein_id=WP_045578078.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 58153 59103 . + . ID=gene-LDO50_RS11840;Name=LDO50_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11840;old_locus_tag=BVI1335_190053 NZ_CAJZAO010000101.1 Protein Homology CDS 58153 59103 . + 0 ID=cds-WP_059474327.1;Parent=gene-LDO50_RS11840;Dbxref=GenBank:WP_059474327.1;Name=WP_059474327.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094003.1;locus_tag=LDO50_RS11840;product=ketopantoate reductase family protein;protein_id=WP_059474327.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 59100 59492 . + . ID=gene-LDO50_RS11845;Name=LDO50_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11845;old_locus_tag=BVI1335_190054 NZ_CAJZAO010000101.1 Protein Homology CDS 59100 59492 . + 0 ID=cds-WP_011882041.1;Parent=gene-LDO50_RS11845;Dbxref=GenBank:WP_011882041.1;Name=WP_011882041.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020066714.1;locus_tag=LDO50_RS11845;product=VOC family protein;protein_id=WP_011882041.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 59494 59952 . + . ID=gene-LDO50_RS11850;Name=LDO50_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11850;old_locus_tag=BVI1335_190055 NZ_CAJZAO010000101.1 Protein Homology CDS 59494 59952 . + 0 ID=cds-WP_011882040.1;Parent=gene-LDO50_RS11850;Dbxref=GenBank:WP_011882040.1;Name=WP_011882040.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012427374.1;locus_tag=LDO50_RS11850;product=MaoC family dehydratase;protein_id=WP_011882040.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 59952 61172 . + . ID=gene-LDO50_RS11855;Name=LDO50_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11855;old_locus_tag=BVI1335_190056 NZ_CAJZAO010000101.1 Protein Homology CDS 59952 61172 . + 0 ID=cds-WP_224019723.1;Parent=gene-LDO50_RS11855;Dbxref=GenBank:WP_224019723.1;Name=WP_224019723.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882039.1;locus_tag=LDO50_RS11855;product=CaiB/BaiF CoA transferase family protein;protein_id=WP_224019723.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 61172 62005 . + . ID=gene-LDO50_RS11860;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=LDO50_RS11860;old_locus_tag=BVI1335_190057 NZ_CAJZAO010000101.1 Protein Homology CDS 61172 62005 . + 0 ID=cds-WP_175983448.1;Parent=gene-LDO50_RS11860;Dbxref=GenBank:WP_175983448.1;Name=WP_175983448.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725027.1;locus_tag=LDO50_RS11860;product=shikimate dehydrogenase;protein_id=WP_175983448.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 62195 63835 . - . ID=gene-LDO50_RS11865;Name=LDO50_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11865;old_locus_tag=BVI1335_190058 NZ_CAJZAO010000101.1 Protein Homology CDS 62195 63835 . - 0 ID=cds-WP_060044445.1;Parent=gene-LDO50_RS11865;Dbxref=GenBank:WP_060044445.1;Name=WP_060044445.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882037.1;locus_tag=LDO50_RS11865;product=methyl-accepting chemotaxis protein;protein_id=WP_060044445.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 64482 65069 . + . ID=gene-LDO50_RS11870;Name=LDO50_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11870;old_locus_tag=BVI1335_190060 NZ_CAJZAO010000101.1 Protein Homology CDS 64482 65069 . + 0 ID=cds-WP_011882035.1;Parent=gene-LDO50_RS11870;Dbxref=GenBank:WP_011882035.1;Name=WP_011882035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479209.1;locus_tag=LDO50_RS11870;product=IMPACT family protein;protein_id=WP_011882035.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 65103 66053 . - . ID=gene-LDO50_RS11875;Name=ppk2;gbkey=Gene;gene=ppk2;gene_biotype=protein_coding;locus_tag=LDO50_RS11875;old_locus_tag=BVI1335_190061 NZ_CAJZAO010000101.1 Protein Homology CDS 65103 66053 . - 0 ID=cds-WP_014725030.1;Parent=gene-LDO50_RS11875;Dbxref=GenBank:WP_014725030.1;Name=WP_014725030.1;Ontology_term=GO:0006793,GO:0008976;gbkey=CDS;gene=ppk2;go_function=polyphosphate kinase activity|0008976||IEA;go_process=phosphorus metabolic process|0006793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547877.1;locus_tag=LDO50_RS11875;product=polyphosphate kinase 2;protein_id=WP_014725030.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 66162 67883 . - . ID=gene-LDO50_RS11880;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=LDO50_RS11880;old_locus_tag=BVI1335_190062 NZ_CAJZAO010000101.1 Protein Homology CDS 66162 67883 . - 0 ID=cds-WP_059463769.1;Parent=gene-LDO50_RS11880;Dbxref=GenBank:WP_059463769.1;Name=WP_059463769.1;Ontology_term=GO:0006750,GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione biosynthetic process|0006750||IEA,glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402458.1;locus_tag=LDO50_RS11880;product=gamma-glutamyltransferase;protein_id=WP_059463769.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 68277 68801 . + . ID=gene-LDO50_RS11885;Name=LDO50_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11885;old_locus_tag=BVI1335_190063 NZ_CAJZAO010000101.1 Protein Homology CDS 68277 68801 . + 0 ID=cds-WP_059463768.1;Parent=gene-LDO50_RS11885;Dbxref=GenBank:WP_059463768.1;Name=WP_059463768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217137.1;locus_tag=LDO50_RS11885;product=metal-dependent hydrolase;protein_id=WP_059463768.1;transl_table=11 NZ_CAJZAO010000101.1 RefSeq gene 69229 72706 . + . ID=gene-LDO50_RS11890;Name=LDO50_RS11890;end_range=72706,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11890;partial=true NZ_CAJZAO010000101.1 Protein Homology CDS 69229 72706 . + 0 ID=cds-WP_224019724.1;Parent=gene-LDO50_RS11890;Dbxref=GenBank:WP_224019724.1;Name=WP_224019724.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;end_range=72706,.;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882031.1;locus_tag=LDO50_RS11890;partial=true;product=DEAD/DEAH box helicase;protein_id=WP_224019724.1;transl_table=11 ##sequence-region NZ_CAJZAO010000102.1 1 15167 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000102.1 RefSeq region 1 15167 . + . ID=NZ_CAJZAO010000102.1:1..15167;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_190 NZ_CAJZAO010000102.1 RefSeq gene 1 547 . - . ID=gene-LDO50_RS11895;Name=LDO50_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11895;partial=true;start_range=.,1 NZ_CAJZAO010000102.1 Protein Homology CDS 1 547 . - 0 ID=cds-WP_224019726.1;Parent=gene-LDO50_RS11895;Dbxref=GenBank:WP_224019726.1;Name=WP_224019726.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495491.1;locus_tag=LDO50_RS11895;partial=true;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_224019726.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000102.1 RefSeq gene 660 2252 . - . ID=gene-LDO50_RS11900;Name=LDO50_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11900;old_locus_tag=BVI1335_1900002 NZ_CAJZAO010000102.1 Protein Homology CDS 660 2252 . - 0 ID=cds-WP_176315417.1;Parent=gene-LDO50_RS11900;Dbxref=GenBank:WP_176315417.1;Name=WP_176315417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411185.1;locus_tag=LDO50_RS11900;product=DUF3138 family protein;protein_id=WP_176315417.1;transl_table=11 NZ_CAJZAO010000102.1 RefSeq gene 2351 3190 . - . ID=gene-LDO50_RS11905;Name=LDO50_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11905;old_locus_tag=BVI1335_1900003 NZ_CAJZAO010000102.1 Protein Homology CDS 2351 3190 . - 0 ID=cds-WP_059454059.1;Parent=gene-LDO50_RS11905;Dbxref=GenBank:WP_059454059.1;Name=WP_059454059.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760185.1;locus_tag=LDO50_RS11905;product=ABC transporter permease subunit;protein_id=WP_059454059.1;transl_table=11 NZ_CAJZAO010000102.1 RefSeq gene 3187 4173 . - . ID=gene-LDO50_RS11910;Name=LDO50_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11910;old_locus_tag=BVI1335_1900004 NZ_CAJZAO010000102.1 Protein Homology CDS 3187 4173 . - 0 ID=cds-WP_034192574.1;Parent=gene-LDO50_RS11910;Dbxref=GenBank:WP_034192574.1;Name=WP_034192574.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546396.1;locus_tag=LDO50_RS11910;product=ABC transporter permease subunit;protein_id=WP_034192574.1;transl_table=11 NZ_CAJZAO010000102.1 RefSeq gene 4184 5338 . - . ID=gene-LDO50_RS11915;Name=LDO50_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11915;old_locus_tag=BVI1335_1900005 NZ_CAJZAO010000102.1 Protein Homology CDS 4184 5338 . - 0 ID=cds-WP_059475577.1;Parent=gene-LDO50_RS11915;Dbxref=GenBank:WP_059475577.1;Name=WP_059475577.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017774051.1;locus_tag=LDO50_RS11915;product=ABC transporter ATP-binding protein;protein_id=WP_059475577.1;transl_table=11 NZ_CAJZAO010000102.1 RefSeq gene 5529 6644 . - . ID=gene-LDO50_RS11920;Name=LDO50_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11920;old_locus_tag=BVI1335_1900006 NZ_CAJZAO010000102.1 Protein Homology CDS 5529 6644 . - 0 ID=cds-WP_011886235.1;Parent=gene-LDO50_RS11920;Dbxref=GenBank:WP_011886235.1;Name=WP_011886235.1;Ontology_term=GO:0015846,GO:0019808,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411182.1;locus_tag=LDO50_RS11920;product=polyamine ABC transporter substrate-binding protein;protein_id=WP_011886235.1;transl_table=11 NZ_CAJZAO010000102.1 RefSeq gene 6706 8139 . - . ID=gene-LDO50_RS11925;Name=LDO50_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11925;old_locus_tag=BVI1335_1900007 NZ_CAJZAO010000102.1 Protein Homology CDS 6706 8139 . - 0 ID=cds-WP_011886234.1;Parent=gene-LDO50_RS11925;Dbxref=GenBank:WP_011886234.1;Name=WP_011886234.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334492.1;locus_tag=LDO50_RS11925;product=aspartate aminotransferase family protein;protein_id=WP_011886234.1;transl_table=11 NZ_CAJZAO010000102.1 RefSeq gene 8177 9514 . - . ID=gene-LDO50_RS11930;Name=LDO50_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11930;old_locus_tag=BVI1335_1900008 NZ_CAJZAO010000102.1 Protein Homology CDS 8177 9514 . - 0 ID=cds-WP_011886233.1;Parent=gene-LDO50_RS11930;Dbxref=GenBank:WP_011886233.1;Name=WP_011886233.1;Ontology_term=GO:0006542,GO:0004356,GO:0005524,GO:0046872;gbkey=CDS;go_function=glutamine synthetase activity|0004356||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851914.1;locus_tag=LDO50_RS11930;product=glutamine synthetase family protein;protein_id=WP_011886233.1;transl_table=11 NZ_CAJZAO010000102.1 RefSeq gene 9544 10329 . - . ID=gene-LDO50_RS11935;Name=LDO50_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11935;old_locus_tag=BVI1335_1900009 NZ_CAJZAO010000102.1 Protein Homology CDS 9544 10329 . - 0 ID=cds-WP_011886232.1;Parent=gene-LDO50_RS11935;Dbxref=GenBank:WP_011886232.1;Name=WP_011886232.1;Ontology_term=GO:0016787,GO:0016811;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895827.1;locus_tag=LDO50_RS11935;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_011886232.1;transl_table=11 NZ_CAJZAO010000102.1 RefSeq gene 10612 10836 . - . ID=gene-LDO50_RS11940;Name=LDO50_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11940;old_locus_tag=BVI1335_1900010 NZ_CAJZAO010000102.1 Protein Homology CDS 10612 10836 . - 0 ID=cds-WP_011886231.1;Parent=gene-LDO50_RS11940;Dbxref=GenBank:WP_011886231.1;Name=WP_011886231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886231.1;locus_tag=LDO50_RS11940;product=hypothetical protein;protein_id=WP_011886231.1;transl_table=11 NZ_CAJZAO010000102.1 RefSeq gene 11251 11802 . + . ID=gene-LDO50_RS11945;Name=LDO50_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11945;old_locus_tag=BVI1335_1900011 NZ_CAJZAO010000102.1 Protein Homology CDS 11251 11802 . + 0 ID=cds-WP_011886230.1;Parent=gene-LDO50_RS11945;Dbxref=GenBank:WP_011886230.1;Name=WP_011886230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529988.1;locus_tag=LDO50_RS11945;product=cupin domain-containing protein;protein_id=WP_011886230.1;transl_table=11 NZ_CAJZAO010000102.1 RefSeq gene 11886 13376 . + . ID=gene-LDO50_RS11950;Name=LDO50_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11950;old_locus_tag=BVI1335_1900012 NZ_CAJZAO010000102.1 Protein Homology CDS 11886 13376 . + 0 ID=cds-WP_014723787.1;Parent=gene-LDO50_RS11950;Dbxref=GenBank:WP_014723787.1;Name=WP_014723787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010108095.1;locus_tag=LDO50_RS11950;product=aldehyde dehydrogenase;protein_id=WP_014723787.1;transl_table=11 NZ_CAJZAO010000102.1 RefSeq gene 13426 13626 . - . ID=gene-LDO50_RS11955;Name=LDO50_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11955;old_locus_tag=BVI1335_1900013 NZ_CAJZAO010000102.1 Protein Homology CDS 13426 13626 . - 0 ID=cds-WP_224019727.1;Parent=gene-LDO50_RS11955;Dbxref=GenBank:WP_224019727.1;Name=WP_224019727.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364874.1;locus_tag=LDO50_RS11955;product=heavy-metal-associated domain-containing protein;protein_id=WP_224019727.1;transl_table=11 NZ_CAJZAO010000102.1 RefSeq gene 13933 14265 . + . ID=gene-LDO50_RS11960;Name=LDO50_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11960;old_locus_tag=BVI1335_1900014 NZ_CAJZAO010000102.1 Protein Homology CDS 13933 14265 . + 0 ID=cds-WP_011886227.1;Parent=gene-LDO50_RS11960;Dbxref=GenBank:WP_011886227.1;Name=WP_011886227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407998.1;locus_tag=LDO50_RS11960;product=cupredoxin domain-containing protein;protein_id=WP_011886227.1;transl_table=11 NZ_CAJZAO010000102.1 RefSeq gene 14278 15114 . + . ID=gene-LDO50_RS11965;Name=LDO50_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11965;old_locus_tag=BVI1335_1900015 NZ_CAJZAO010000102.1 Protein Homology CDS 14278 15114 . + 0 ID=cds-WP_014723785.1;Parent=gene-LDO50_RS11965;Dbxref=GenBank:WP_014723785.1;Name=WP_014723785.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090450.1;locus_tag=LDO50_RS11965;product=FTR1 family iron permease;protein_id=WP_014723785.1;transl_table=11 ##sequence-region NZ_CAJZAO010000103.1 1 13173 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000103.1 RefSeq region 1 13173 . + . ID=NZ_CAJZAO010000103.1:1..13173;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_191 NZ_CAJZAO010000103.1 RefSeq gene 1 178 . - . ID=gene-LDO50_RS11970;Name=LDO50_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11970;partial=true;start_range=.,1 NZ_CAJZAO010000103.1 Protein Homology CDS 1 178 . - 0 ID=cds-WP_224019730.1;Parent=gene-LDO50_RS11970;Dbxref=GenBank:WP_224019730.1;Name=WP_224019730.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722306.1;locus_tag=LDO50_RS11970;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_224019730.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000103.1 cmsearch riboswitch 413 535 . - . ID=id-NZ_CAJZAO010000103.1:413..535;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAO010000103.1 RefSeq gene 805 2571 . + . ID=gene-LDO50_RS11975;Name=LDO50_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11975;old_locus_tag=BVI1335_1910002 NZ_CAJZAO010000103.1 Protein Homology CDS 805 2571 . + 0 ID=cds-WP_060044705.1;Parent=gene-LDO50_RS11975;Dbxref=GenBank:WP_060044705.1;Name=WP_060044705.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400601.1;locus_tag=LDO50_RS11975;product=ABC transporter ATP-binding protein/permease;protein_id=WP_060044705.1;transl_table=11 NZ_CAJZAO010000103.1 RefSeq gene 2684 3238 . - . ID=gene-LDO50_RS11980;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=LDO50_RS11980;old_locus_tag=BVI1335_1910003 NZ_CAJZAO010000103.1 Protein Homology CDS 2684 3238 . - 0 ID=cds-WP_060044704.1;Parent=gene-LDO50_RS11980;Dbxref=GenBank:WP_060044704.1;Name=WP_060044704.1;Ontology_term=GO:0008033,GO:0008664;gbkey=CDS;gene=thpR;go_function=RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722303.1;locus_tag=LDO50_RS11980;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_060044704.1;transl_table=11 NZ_CAJZAO010000103.1 RefSeq gene 3235 3477 . - . ID=gene-LDO50_RS11985;Name=LDO50_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11985;old_locus_tag=BVI1335_1910004 NZ_CAJZAO010000103.1 GeneMarkS-2+ CDS 3235 3477 . - 0 ID=cds-WP_224019728.1;Parent=gene-LDO50_RS11985;Dbxref=GenBank:WP_224019728.1;Name=WP_224019728.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS11985;product=hypothetical protein;protein_id=WP_224019728.1;transl_table=11 NZ_CAJZAO010000103.1 RefSeq gene 3753 5219 . - . ID=gene-LDO50_RS11990;Name=LDO50_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11990;old_locus_tag=BVI1335_1910005 NZ_CAJZAO010000103.1 Protein Homology CDS 3753 5219 . - 0 ID=cds-WP_011883036.1;Parent=gene-LDO50_RS11990;Dbxref=GenBank:WP_011883036.1;Name=WP_011883036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016346426.1;locus_tag=LDO50_RS11990;product=glutamate synthase subunit beta;protein_id=WP_011883036.1;transl_table=11 NZ_CAJZAO010000103.1 RefSeq gene 5305 10008 . - . ID=gene-LDO50_RS11995;Name=LDO50_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS11995;old_locus_tag=BVI1335_1910006 NZ_CAJZAO010000103.1 Protein Homology CDS 5305 10008 . - 0 ID=cds-WP_011883035.1;Parent=gene-LDO50_RS11995;Dbxref=GenBank:WP_011883035.1;Name=WP_011883035.1;Ontology_term=GO:0006537,GO:0015930,GO:0016638;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;go_process=glutamate biosynthetic process|0006537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477150.1;locus_tag=LDO50_RS11995;product=glutamate synthase-related protein;protein_id=WP_011883035.1;transl_table=11 NZ_CAJZAO010000103.1 RefSeq gene 10300 11013 . - . ID=gene-LDO50_RS12000;Name=LDO50_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12000;old_locus_tag=BVI1335_1910007 NZ_CAJZAO010000103.1 Protein Homology CDS 10300 11013 . - 0 ID=cds-WP_034194003.1;Parent=gene-LDO50_RS12000;Dbxref=GenBank:WP_034194003.1;Name=WP_034194003.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898328.1;locus_tag=LDO50_RS12000;product=transposase;protein_id=WP_034194003.1;transl_table=11 NZ_CAJZAO010000103.1 RefSeq gene 11206 11937 . + . ID=gene-LDO50_RS12005;Name=LDO50_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12005;old_locus_tag=BVI1335_1910008 NZ_CAJZAO010000103.1 Protein Homology CDS 11206 11937 . + 0 ID=cds-WP_011883033.1;Parent=gene-LDO50_RS12005;Dbxref=GenBank:WP_011883033.1;Name=WP_011883033.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350702.1;locus_tag=LDO50_RS12005;product=OmpW/AlkL family protein;protein_id=WP_011883033.1;transl_table=11 NZ_CAJZAO010000103.1 RefSeq gene 12106 12821 . - . ID=gene-LDO50_RS12010;Name=ugpQ;end_range=12821,.;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=LDO50_RS12010;old_locus_tag=BVI1335_1910009;partial=true NZ_CAJZAO010000103.1 Protein Homology CDS 12106 12821 . - 2 ID=cds-WP_443797764.1;Parent=gene-LDO50_RS12010;Dbxref=GenBank:WP_443797764.1;Name=WP_443797764.1;Ontology_term=GO:0006629,GO:0008081;end_range=12821,.;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883032.1;locus_tag=LDO50_RS12010;partial=true;product=glycerophosphodiester phosphodiesterase;protein_id=WP_443797764.1;transl_table=11 NZ_CAJZAO010000103.1 RefSeq gene 12935 13173 . - . ID=gene-LDO50_RS12015;Name=LDO50_RS12015;end_range=13173,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12015;old_locus_tag=BVI1335_1910010;partial=true NZ_CAJZAO010000103.1 Protein Homology CDS 12935 13173 . - 2 ID=cds-WP_224019729.1;Parent=gene-LDO50_RS12015;Dbxref=GenBank:WP_224019729.1;Name=WP_224019729.1;Ontology_term=GO:0055085,GO:0005524,GO:0022857,GO:0043190;end_range=13173,.;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004547598.1;locus_tag=LDO50_RS12015;partial=true;product=TOBE domain-containing protein;protein_id=WP_224019729.1;transl_table=11 ##sequence-region NZ_CAJZAO010000104.1 1 1894 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000104.1 RefSeq region 1 1894 . + . ID=NZ_CAJZAO010000104.1:1..1894;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_192 NZ_CAJZAO010000104.1 RefSeq pseudogene 1 281 . + . ID=gene-LDO50_RS12020;Name=LDO50_RS12020;end_range=281,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS12020;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000104.1 Protein Homology CDS 1 281 . + 2 ID=cds-LDO50_RS12020;Parent=gene-LDO50_RS12020;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=281,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725167.1;locus_tag=LDO50_RS12020;partial=true;product=PucR family transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000104.1 RefSeq gene 779 1191 . + . ID=gene-LDO50_RS12025;Name=LDO50_RS12025;end_range=1191,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12025;old_locus_tag=BVI1335_1920002;partial=true NZ_CAJZAO010000104.1 Protein Homology CDS 779 1191 . + 0 ID=cds-WP_224019731.1;Parent=gene-LDO50_RS12025;Dbxref=GenBank:WP_224019731.1;Name=WP_224019731.1;Ontology_term=GO:0003824;end_range=1191,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881868.1;locus_tag=LDO50_RS12025;partial=true;product=enoyl-CoA hydratase-related protein;protein_id=WP_224019731.1;transl_table=11 NZ_CAJZAO010000104.1 RefSeq gene 1478 1573 . - . ID=gene-LDO50_RS12030;Name=LDO50_RS12030;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS12030 NZ_CAJZAO010000104.1 tRNAscan-SE tRNA 1478 1573 . - . ID=rna-LDO50_RS12030;Parent=gene-LDO50_RS12030;anticodon=(pos:complement(1537..1539));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS12030;product=tRNA-Sec NZ_CAJZAO010000104.1 tRNAscan-SE exon 1478 1573 . - . ID=exon-LDO50_RS12030-1;Parent=rna-LDO50_RS12030;anticodon=(pos:complement(1537..1539));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS12030;product=tRNA-Sec NZ_CAJZAO010000104.1 RefSeq gene 1661 1894 . - . ID=gene-LDO50_RS12035;Name=LDO50_RS12035;end_range=1894,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12035;old_locus_tag=BVI1335_1920003;partial=true;start_range=.,1661 NZ_CAJZAO010000104.1 Protein Homology CDS 1661 1894 . - 0 ID=cds-WP_290370712.1;Parent=gene-LDO50_RS12035;Dbxref=GenBank:WP_290370712.1;Name=WP_290370712.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0005525,GO:0005737;end_range=1894,.;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495930.1;locus_tag=LDO50_RS12035;partial=true;product=DNA/RNA-binding winged helix domain-containing protein;protein_id=WP_290370712.1;start_range=.,1661;transl_table=11 ##sequence-region NZ_CAJZAO010000105.1 1 17623 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000105.1 RefSeq region 1 17623 . + . ID=NZ_CAJZAO010000105.1:1..17623;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_193 NZ_CAJZAO010000105.1 RefSeq pseudogene 170 333 . + . ID=gene-LDO50_RS31465;Name=LDO50_RS31465;end_range=333,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31465;old_locus_tag=BVI1335_1930001;partial=true;pseudo=true NZ_CAJZAO010000105.1 Protein Homology CDS 170 333 . + 0 ID=cds-LDO50_RS31465;Parent=gene-LDO50_RS31465;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=333,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545673.1;locus_tag=LDO50_RS31465;partial=true;product=phosphohydrolase;pseudo=true;transl_table=11 NZ_CAJZAO010000105.1 RefSeq gene 344 853 . + . ID=gene-LDO50_RS12040;Name=LDO50_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12040;old_locus_tag=BVI1335_1930002;partial=true;start_range=.,344 NZ_CAJZAO010000105.1 Protein Homology CDS 344 853 . + 0 ID=cds-WP_443797765.1;Parent=gene-LDO50_RS12040;Dbxref=GenBank:WP_443797765.1;Name=WP_443797765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760334.1;locus_tag=LDO50_RS12040;partial=true;product=phosphohydrolase;protein_id=WP_443797765.1;start_range=.,344;transl_table=11 NZ_CAJZAO010000105.1 RefSeq gene 942 2054 . - . ID=gene-LDO50_RS12045;Name=LDO50_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12045;old_locus_tag=BVI1335_1930003 NZ_CAJZAO010000105.1 Protein Homology CDS 942 2054 . - 0 ID=cds-WP_011880444.1;Parent=gene-LDO50_RS12045;Dbxref=GenBank:WP_011880444.1;Name=WP_011880444.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726105.1;locus_tag=LDO50_RS12045;product=alkene reductase;protein_id=WP_011880444.1;transl_table=11 NZ_CAJZAO010000105.1 RefSeq gene 2101 3318 . - . ID=gene-LDO50_RS12050;Name=LDO50_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12050;old_locus_tag=BVI1335_1930004 NZ_CAJZAO010000105.1 Protein Homology CDS 2101 3318 . - 0 ID=cds-WP_011880443.1;Parent=gene-LDO50_RS12050;Dbxref=GenBank:WP_011880443.1;Name=WP_011880443.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545671.1;locus_tag=LDO50_RS12050;product=MFS transporter;protein_id=WP_011880443.1;transl_table=11 NZ_CAJZAO010000105.1 RefSeq gene 3500 4417 . - . ID=gene-LDO50_RS12055;Name=LDO50_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12055;old_locus_tag=BVI1335_1930005 NZ_CAJZAO010000105.1 Protein Homology CDS 3500 4417 . - 0 ID=cds-WP_011880442.1;Parent=gene-LDO50_RS12055;Dbxref=GenBank:WP_011880442.1;Name=WP_011880442.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100311.1;locus_tag=LDO50_RS12055;product=LysR family transcriptional regulator;protein_id=WP_011880442.1;transl_table=11 NZ_CAJZAO010000105.1 RefSeq gene 4503 6764 . - . ID=gene-LDO50_RS12060;Name=LDO50_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12060;old_locus_tag=BVI1335_1930006 NZ_CAJZAO010000105.1 Protein Homology CDS 4503 6764 . - 0 ID=cds-WP_011880441.1;Parent=gene-LDO50_RS12060;Dbxref=GenBank:WP_011880441.1;Name=WP_011880441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880441.1;locus_tag=LDO50_RS12060;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;protein_id=WP_011880441.1;transl_table=11 NZ_CAJZAO010000105.1 RefSeq gene 6764 7264 . - . ID=gene-LDO50_RS12065;Name=LDO50_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12065;old_locus_tag=BVI1335_1930007 NZ_CAJZAO010000105.1 Protein Homology CDS 6764 7264 . - 0 ID=cds-WP_011880440.1;Parent=gene-LDO50_RS12065;Dbxref=GenBank:WP_011880440.1;Name=WP_011880440.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498476.1;locus_tag=LDO50_RS12065;product=(2Fe-2S)-binding protein;protein_id=WP_011880440.1;transl_table=11 NZ_CAJZAO010000105.1 RefSeq gene 7261 8547 . - . ID=gene-LDO50_RS12070;Name=LDO50_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12070;old_locus_tag=BVI1335_1930008 NZ_CAJZAO010000105.1 Protein Homology CDS 7261 8547 . - 0 ID=cds-WP_011880439.1;Parent=gene-LDO50_RS12070;Dbxref=GenBank:WP_011880439.1;Name=WP_011880439.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481364.1;locus_tag=LDO50_RS12070;product=c-type cytochrome;protein_id=WP_011880439.1;transl_table=11 NZ_CAJZAO010000105.1 RefSeq gene 8808 9965 . - . ID=gene-LDO50_RS12075;Name=LDO50_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12075;old_locus_tag=BVI1335_1930009 NZ_CAJZAO010000105.1 Protein Homology CDS 8808 9965 . - 0 ID=cds-WP_059890422.1;Parent=gene-LDO50_RS12075;Dbxref=GenBank:WP_059890422.1;Name=WP_059890422.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726102.1;locus_tag=LDO50_RS12075;product=amidohydrolase family protein;protein_id=WP_059890422.1;transl_table=11 NZ_CAJZAO010000105.1 RefSeq gene 9962 11635 . - . ID=gene-LDO50_RS12080;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=LDO50_RS12080;old_locus_tag=BVI1335_1930010 NZ_CAJZAO010000105.1 Protein Homology CDS 9962 11635 . - 0 ID=cds-WP_011880437.1;Parent=gene-LDO50_RS12080;Dbxref=GenBank:WP_011880437.1;Name=WP_011880437.1;gbkey=CDS;gene=actP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726101.1;locus_tag=LDO50_RS12080;product=cation/acetate symporter ActP;protein_id=WP_011880437.1;transl_table=11 NZ_CAJZAO010000105.1 RefSeq gene 11632 11991 . - . ID=gene-LDO50_RS12085;Name=LDO50_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12085;old_locus_tag=BVI1335_1930011 NZ_CAJZAO010000105.1 Protein Homology CDS 11632 11991 . - 0 ID=cds-WP_011880436.1;Parent=gene-LDO50_RS12085;Dbxref=GenBank:WP_011880436.1;Name=WP_011880436.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726100.1;locus_tag=LDO50_RS12085;product=DUF485 domain-containing protein;protein_id=WP_011880436.1;transl_table=11 NZ_CAJZAO010000105.1 RefSeq gene 12056 13282 . - . ID=gene-LDO50_RS12090;Name=LDO50_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12090;old_locus_tag=BVI1335_1930012 NZ_CAJZAO010000105.1 Protein Homology CDS 12056 13282 . - 0 ID=cds-WP_011880435.1;Parent=gene-LDO50_RS12090;Dbxref=GenBank:WP_011880435.1;Name=WP_011880435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726099.1;locus_tag=LDO50_RS12090;product=FAD binding domain-containing protein;protein_id=WP_011880435.1;transl_table=11 NZ_CAJZAO010000105.1 RefSeq gene 13284 13757 . - . ID=gene-LDO50_RS12095;Name=LDO50_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12095;old_locus_tag=BVI1335_1930013 NZ_CAJZAO010000105.1 Protein Homology CDS 13284 13757 . - 0 ID=cds-WP_011880434.1;Parent=gene-LDO50_RS12095;Dbxref=GenBank:WP_011880434.1;Name=WP_011880434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880434.1;locus_tag=LDO50_RS12095;product=VOC family protein;protein_id=WP_011880434.1;transl_table=11 NZ_CAJZAO010000105.1 RefSeq pseudogene 13916 14008 . - . ID=gene-LDO50_RS12100;Name=LDO50_RS12100;end_range=14008,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS12100;partial=true;pseudo=true NZ_CAJZAO010000105.1 Protein Homology CDS 13916 14008 . - 0 ID=cds-LDO50_RS12100;Parent=gene-LDO50_RS12100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=14008,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330287.1;locus_tag=LDO50_RS12100;partial=true;product=type VI secretion system baseplate subunit TssE;pseudo=true;transl_table=11 NZ_CAJZAO010000105.1 RefSeq gene 14410 15675 . + . ID=gene-LDO50_RS12105;Name=LDO50_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12105;old_locus_tag=BVI1335_1930015 NZ_CAJZAO010000105.1 Protein Homology CDS 14410 15675 . + 0 ID=cds-WP_011880433.1;Parent=gene-LDO50_RS12105;Dbxref=GenBank:WP_011880433.1;Name=WP_011880433.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726076.1;locus_tag=LDO50_RS12105;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_011880433.1;transl_table=11 NZ_CAJZAO010000105.1 RefSeq gene 15715 17148 . - . ID=gene-LDO50_RS12110;Name=LDO50_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12110;old_locus_tag=BVI1335_1930016 NZ_CAJZAO010000105.1 Protein Homology CDS 15715 17148 . - 0 ID=cds-WP_011880432.1;Parent=gene-LDO50_RS12110;Dbxref=GenBank:WP_011880432.1;Name=WP_011880432.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337482.1;locus_tag=LDO50_RS12110;product=efflux transporter outer membrane subunit;protein_id=WP_011880432.1;transl_table=11 NZ_CAJZAO010000105.1 RefSeq gene 17145 17623 . - . ID=gene-LDO50_RS12115;Name=LDO50_RS12115;end_range=17623,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12115;partial=true NZ_CAJZAO010000105.1 Protein Homology CDS 17145 17623 . - 2 ID=cds-WP_224019733.1;Parent=gene-LDO50_RS12115;Dbxref=GenBank:WP_224019733.1;Name=WP_224019733.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=17623,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545665.1;locus_tag=LDO50_RS12115;partial=true;product=HlyD family secretion protein;protein_id=WP_224019733.1;transl_table=11 ##sequence-region NZ_CAJZAO010000106.1 1 12470 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000106.1 RefSeq region 1 12470 . + . ID=NZ_CAJZAO010000106.1:1..12470;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_194 NZ_CAJZAO010000106.1 RefSeq gene 1 661 . + . ID=gene-LDO50_RS12120;Name=LDO50_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12120;old_locus_tag=BVI1335_1940001;partial=true;start_range=.,1 NZ_CAJZAO010000106.1 Protein Homology CDS 1 661 . + 1 ID=cds-WP_224019734.1;Parent=gene-LDO50_RS12120;Dbxref=GenBank:WP_224019734.1;Name=WP_224019734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726264.1;locus_tag=LDO50_RS12120;partial=true;product=MlrC C-terminal domain-containing protein;protein_id=WP_224019734.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000106.1 RefSeq gene 776 1963 . + . ID=gene-LDO50_RS12125;Name=LDO50_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12125;old_locus_tag=BVI1335_1940002 NZ_CAJZAO010000106.1 Protein Homology CDS 776 1963 . + 0 ID=cds-WP_124260281.1;Parent=gene-LDO50_RS12125;Dbxref=GenBank:WP_124260281.1;Name=WP_124260281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399148.1;locus_tag=LDO50_RS12125;product=YncE family protein;protein_id=WP_124260281.1;transl_table=11 NZ_CAJZAO010000106.1 RefSeq gene 2171 2305 . - . ID=gene-LDO50_RS30835;Name=LDO50_RS30835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30835;old_locus_tag=BVI1335_1940003 NZ_CAJZAO010000106.1 Protein Homology CDS 2171 2305 . - 0 ID=cds-WP_011880630.1;Parent=gene-LDO50_RS30835;Dbxref=GenBank:WP_011880630.1;Name=WP_011880630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880630.1;locus_tag=LDO50_RS30835;product=hypothetical protein;protein_id=WP_011880630.1;transl_table=11 NZ_CAJZAO010000106.1 RefSeq gene 2631 3062 . + . ID=gene-LDO50_RS12130;Name=LDO50_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12130;old_locus_tag=BVI1335_1940005 NZ_CAJZAO010000106.1 Protein Homology CDS 2631 3062 . + 0 ID=cds-WP_124260280.1;Parent=gene-LDO50_RS12130;Dbxref=GenBank:WP_124260280.1;Name=WP_124260280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760662.1;locus_tag=LDO50_RS12130;product=hypothetical protein;protein_id=WP_124260280.1;transl_table=11 NZ_CAJZAO010000106.1 RefSeq gene 3141 3953 . + . ID=gene-LDO50_RS12135;Name=LDO50_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12135;old_locus_tag=BVI1335_1940006 NZ_CAJZAO010000106.1 Protein Homology CDS 3141 3953 . + 0 ID=cds-WP_045579888.1;Parent=gene-LDO50_RS12135;Dbxref=GenBank:WP_045579888.1;Name=WP_045579888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481116.1;locus_tag=LDO50_RS12135;product=alpha/beta fold hydrolase;protein_id=WP_045579888.1;transl_table=11 NZ_CAJZAO010000106.1 RefSeq gene 4044 4985 . - . ID=gene-LDO50_RS12140;Name=LDO50_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12140;old_locus_tag=BVI1335_1940007 NZ_CAJZAO010000106.1 Protein Homology CDS 4044 4985 . - 0 ID=cds-WP_014726259.1;Parent=gene-LDO50_RS12140;Dbxref=GenBank:WP_014726259.1;Name=WP_014726259.1;Ontology_term=GO:0009436,GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=glyoxylate catabolic process|0009436||IEA,obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660982.1;locus_tag=LDO50_RS12140;product=dihydrodipicolinate synthase family protein;protein_id=WP_014726259.1;transl_table=11 NZ_CAJZAO010000106.1 RefSeq gene 5511 6191 . + . ID=gene-LDO50_RS12145;Name=LDO50_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12145;old_locus_tag=BVI1335_1940009 NZ_CAJZAO010000106.1 Protein Homology CDS 5511 6191 . + 0 ID=cds-WP_011880625.1;Parent=gene-LDO50_RS12145;Dbxref=GenBank:WP_011880625.1;Name=WP_011880625.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750619.1;locus_tag=LDO50_RS12145;product=GntR family transcriptional regulator;protein_id=WP_011880625.1;transl_table=11 NZ_CAJZAO010000106.1 RefSeq gene 6310 6504 . - . ID=gene-LDO50_RS12150;Name=LDO50_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12150;old_locus_tag=BVI1335_1940010 NZ_CAJZAO010000106.1 Protein Homology CDS 6310 6504 . - 0 ID=cds-WP_124260279.1;Parent=gene-LDO50_RS12150;Dbxref=GenBank:WP_124260279.1;Name=WP_124260279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399114.1;locus_tag=LDO50_RS12150;product=hypothetical protein;protein_id=WP_124260279.1;transl_table=11 NZ_CAJZAO010000106.1 RefSeq gene 7083 8069 . + . ID=gene-LDO50_RS12155;Name=LDO50_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12155;old_locus_tag=BVI1335_1940013 NZ_CAJZAO010000106.1 Protein Homology CDS 7083 8069 . + 0 ID=cds-WP_011880623.1;Parent=gene-LDO50_RS12155;Dbxref=GenBank:WP_011880623.1;Name=WP_011880623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726257.1;locus_tag=LDO50_RS12155;product=TRAP transporter substrate-binding protein;protein_id=WP_011880623.1;transl_table=11 NZ_CAJZAO010000106.1 RefSeq gene 8066 8635 . + . ID=gene-LDO50_RS12160;Name=LDO50_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12160;old_locus_tag=BVI1335_1940014 NZ_CAJZAO010000106.1 Protein Homology CDS 8066 8635 . + 0 ID=cds-WP_045579886.1;Parent=gene-LDO50_RS12160;Dbxref=GenBank:WP_045579886.1;Name=WP_045579886.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726256.1;locus_tag=LDO50_RS12160;product=TRAP transporter small permease;protein_id=WP_045579886.1;transl_table=11 NZ_CAJZAO010000106.1 RefSeq gene 8640 9992 . + . ID=gene-LDO50_RS12165;Name=LDO50_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12165;old_locus_tag=BVI1335_1940015 NZ_CAJZAO010000106.1 Protein Homology CDS 8640 9992 . + 0 ID=cds-WP_011880621.1;Parent=gene-LDO50_RS12165;Dbxref=GenBank:WP_011880621.1;Name=WP_011880621.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350121.1;locus_tag=LDO50_RS12165;product=TRAP transporter large permease;protein_id=WP_011880621.1;transl_table=11 NZ_CAJZAO010000106.1 RefSeq gene 10443 11267 . + . ID=gene-LDO50_RS12170;Name=LDO50_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12170;old_locus_tag=BVI1335_1940017 NZ_CAJZAO010000106.1 Protein Homology CDS 10443 11267 . + 0 ID=cds-WP_224019735.1;Parent=gene-LDO50_RS12170;Dbxref=GenBank:WP_224019735.1;Name=WP_224019735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880620.1;locus_tag=LDO50_RS12170;product=alpha/beta fold hydrolase;protein_id=WP_224019735.1;transl_table=11 NZ_CAJZAO010000106.1 RefSeq gene 11355 12470 . - . ID=gene-LDO50_RS12175;Name=LDO50_RS12175;end_range=12470,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12175;old_locus_tag=BVI1335_1940018;partial=true NZ_CAJZAO010000106.1 Protein Homology CDS 11355 12470 . - 0 ID=cds-WP_224019736.1;Parent=gene-LDO50_RS12175;Dbxref=GenBank:WP_224019736.1;Name=WP_224019736.1;Ontology_term=GO:0055085,GO:0022857;end_range=12470,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336998.1;locus_tag=LDO50_RS12175;partial=true;product=MFS transporter;protein_id=WP_224019736.1;transl_table=11 ##sequence-region NZ_CAJZAO010000107.1 1 25061 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000107.1 RefSeq region 1 25061 . + . ID=NZ_CAJZAO010000107.1:1..25061;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_195 NZ_CAJZAO010000107.1 RefSeq gene 1 1033 . - . ID=gene-LDO50_RS12180;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=LDO50_RS12180;partial=true;start_range=.,1 NZ_CAJZAO010000107.1 Protein Homology CDS 1 1033 . - 0 ID=cds-WP_224019737.1;Parent=gene-LDO50_RS12180;Dbxref=GenBank:WP_224019737.1;Name=WP_224019737.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328120.1;locus_tag=LDO50_RS12180;partial=true;product=prephenate dehydratase;protein_id=WP_224019737.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000107.1 RefSeq gene 1066 2148 . - . ID=gene-LDO50_RS12185;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=LDO50_RS12185;old_locus_tag=BVI1335_1950002 NZ_CAJZAO010000107.1 Protein Homology CDS 1066 2148 . - 0 ID=cds-WP_059462870.1;Parent=gene-LDO50_RS12185;Dbxref=GenBank:WP_059462870.1;Name=WP_059462870.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476577.1;locus_tag=LDO50_RS12185;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_059462870.1;transl_table=11 NZ_CAJZAO010000107.1 RefSeq gene 2323 2922 . - . ID=gene-LDO50_RS12190;Name=LDO50_RS12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12190;old_locus_tag=BVI1335_1950003 NZ_CAJZAO010000107.1 Protein Homology CDS 2323 2922 . - 0 ID=cds-WP_011883810.1;Parent=gene-LDO50_RS12190;Dbxref=GenBank:WP_011883810.1;Name=WP_011883810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009916801.1;locus_tag=LDO50_RS12190;product=DUF2059 domain-containing protein;protein_id=WP_011883810.1;transl_table=11 NZ_CAJZAO010000107.1 RefSeq gene 3007 5610 . - . ID=gene-LDO50_RS12195;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=LDO50_RS12195;old_locus_tag=BVI1335_1950004 NZ_CAJZAO010000107.1 Protein Homology CDS 3007 5610 . - 0 ID=cds-WP_011883808.1;Parent=gene-LDO50_RS12195;Dbxref=GenBank:WP_011883808.1;Name=WP_011883808.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527513.1;locus_tag=LDO50_RS12195;product=DNA gyrase subunit A;protein_id=WP_011883808.1;transl_table=11 NZ_CAJZAO010000107.1 RefSeq gene 6148 6819 . + . ID=gene-LDO50_RS12200;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=LDO50_RS12200;old_locus_tag=BVI1335_1950005 NZ_CAJZAO010000107.1 Protein Homology CDS 6148 6819 . + 0 ID=cds-WP_011883806.1;Parent=gene-LDO50_RS12200;Dbxref=GenBank:WP_011883806.1;Name=WP_011883806.1;Ontology_term=GO:0006811,GO:0015288;gbkey=CDS;gene=ompA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189892.1;locus_tag=LDO50_RS12200;product=outer membrane protein OmpA;protein_id=WP_011883806.1;transl_table=11 NZ_CAJZAO010000107.1 RefSeq gene 6970 7668 . + . ID=gene-LDO50_RS12205;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=LDO50_RS12205;old_locus_tag=BVI1335_1950006 NZ_CAJZAO010000107.1 Protein Homology CDS 6970 7668 . + 0 ID=cds-WP_011883804.1;Parent=gene-LDO50_RS12205;Dbxref=GenBank:WP_011883804.1;Name=WP_011883804.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486844.1;locus_tag=LDO50_RS12205;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_011883804.1;transl_table=11 NZ_CAJZAO010000107.1 RefSeq gene 7682 8398 . + . ID=gene-LDO50_RS12210;Name=LDO50_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12210;old_locus_tag=BVI1335_1950007 NZ_CAJZAO010000107.1 Protein Homology CDS 7682 8398 . + 0 ID=cds-WP_034194137.1;Parent=gene-LDO50_RS12210;Dbxref=GenBank:WP_034194137.1;Name=WP_034194137.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351325.1;locus_tag=LDO50_RS12210;product=HAD-IA family hydrolase;protein_id=WP_034194137.1;transl_table=11 NZ_CAJZAO010000107.1 RefSeq gene 8416 8785 . + . ID=gene-LDO50_RS12215;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=LDO50_RS12215 NZ_CAJZAO010000107.1 cmsearch tmRNA 8416 8785 . + . ID=rna-LDO50_RS12215;Parent=gene-LDO50_RS12215;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO50_RS12215;product=transfer-messenger RNA NZ_CAJZAO010000107.1 cmsearch exon 8416 8785 . + . ID=exon-LDO50_RS12215-1;Parent=rna-LDO50_RS12215;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO50_RS12215;product=transfer-messenger RNA NZ_CAJZAO010000107.1 RefSeq gene 9325 9675 . - . ID=gene-LDO50_RS12220;Name=LDO50_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12220;old_locus_tag=BVI1335_1950010 NZ_CAJZAO010000107.1 Protein Homology CDS 9325 9675 . - 0 ID=cds-WP_011883800.1;Parent=gene-LDO50_RS12220;Dbxref=GenBank:WP_011883800.1;Name=WP_011883800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897737.1;locus_tag=LDO50_RS12220;product=DUF4148 domain-containing protein;protein_id=WP_011883800.1;transl_table=11 NZ_CAJZAO010000107.1 RefSeq gene 9956 10225 . - . ID=gene-LDO50_RS12225;Name=LDO50_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12225;old_locus_tag=BVI1335_1950011 NZ_CAJZAO010000107.1 Protein Homology CDS 9956 10225 . - 0 ID=cds-WP_011883798.1;Parent=gene-LDO50_RS12225;Dbxref=GenBank:WP_011883798.1;Name=WP_011883798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883798.1;locus_tag=LDO50_RS12225;product=hypothetical protein;protein_id=WP_011883798.1;transl_table=11 NZ_CAJZAO010000107.1 RefSeq gene 10327 11430 . - . ID=gene-LDO50_RS12230;Name=LDO50_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12230;old_locus_tag=BVI1335_1950012 NZ_CAJZAO010000107.1 Protein Homology CDS 10327 11430 . - 0 ID=cds-WP_176000693.1;Parent=gene-LDO50_RS12230;Dbxref=GenBank:WP_176000693.1;Name=WP_176000693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656257.1;locus_tag=LDO50_RS12230;product=substrate-binding domain-containing protein;protein_id=WP_176000693.1;transl_table=11 NZ_CAJZAO010000107.1 RefSeq gene 11562 12062 . + . ID=gene-LDO50_RS12235;Name=LDO50_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12235;old_locus_tag=BVI1335_1950014 NZ_CAJZAO010000107.1 Protein Homology CDS 11562 12062 . + 0 ID=cds-WP_014722672.1;Parent=gene-LDO50_RS12235;Dbxref=GenBank:WP_014722672.1;Name=WP_014722672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904393.1;locus_tag=LDO50_RS12235;product=NAD(P)H-dependent oxidoreductase subunit E;protein_id=WP_014722672.1;transl_table=11 NZ_CAJZAO010000107.1 RefSeq gene 12059 13636 . + . ID=gene-LDO50_RS12240;Name=LDO50_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12240;old_locus_tag=BVI1335_1950013 NZ_CAJZAO010000107.1 Protein Homology CDS 12059 13636 . + 0 ID=cds-WP_059695236.1;Parent=gene-LDO50_RS12240;Dbxref=GenBank:WP_059695236.1;Name=WP_059695236.1;Ontology_term=GO:0051539,GO:0009326;gbkey=CDS;go_component=formate dehydrogenase complex|0009326||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544874.1;locus_tag=LDO50_RS12240;product=formate dehydrogenase beta subunit;protein_id=WP_059695236.1;transl_table=11 NZ_CAJZAO010000107.1 RefSeq gene 13654 16605 . + . ID=gene-LDO50_RS12245;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=LDO50_RS12245;old_locus_tag=BVI1335_1950015 NZ_CAJZAO010000107.1 Protein Homology CDS 13654 16605 . + 0 ID=cds-WP_176322760.1;Parent=gene-LDO50_RS12245;Dbxref=GenBank:WP_176322760.1;Name=WP_176322760.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363333.1;locus_tag=LDO50_RS12245;product=formate dehydrogenase subunit alpha;protein_id=WP_176322760.1;transl_table=11 NZ_CAJZAO010000107.1 RefSeq gene 16613 16864 . + . ID=gene-LDO50_RS12250;Name=LDO50_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12250;old_locus_tag=BVI1335_1950016 NZ_CAJZAO010000107.1 Protein Homology CDS 16613 16864 . + 0 ID=cds-WP_011883789.1;Parent=gene-LDO50_RS12250;Dbxref=GenBank:WP_011883789.1;Name=WP_011883789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750770.1;locus_tag=LDO50_RS12250;product=formate dehydrogenase subunit delta;protein_id=WP_011883789.1;transl_table=11 NZ_CAJZAO010000107.1 RefSeq gene 16929 18596 . - . ID=gene-LDO50_RS12255;Name=LDO50_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12255;old_locus_tag=BVI1335_1950017 NZ_CAJZAO010000107.1 Protein Homology CDS 16929 18596 . - 0 ID=cds-WP_014722669.1;Parent=gene-LDO50_RS12255;Dbxref=GenBank:WP_014722669.1;Name=WP_014722669.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756777.1;locus_tag=LDO50_RS12255;product=FAD-dependent monooxygenase;protein_id=WP_014722669.1;transl_table=11 NZ_CAJZAO010000107.1 RefSeq gene 18727 20565 . + . ID=gene-LDO50_RS12260;Name=LDO50_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12260;old_locus_tag=BVI1335_1950018 NZ_CAJZAO010000107.1 Protein Homology CDS 18727 20565 . + 0 ID=cds-WP_425129975.1;Parent=gene-LDO50_RS12260;Dbxref=GenBank:WP_425129975.1;Name=WP_425129975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722667.1;locus_tag=LDO50_RS12260;product=tetratricopeptide repeat protein;protein_id=WP_425129975.1;transl_table=11 NZ_CAJZAO010000107.1 RefSeq gene 20637 21932 . - . ID=gene-LDO50_RS12265;Name=LDO50_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12265;old_locus_tag=BVI1335_1950019 NZ_CAJZAO010000107.1 Protein Homology CDS 20637 21932 . - 0 ID=cds-WP_011883785.1;Parent=gene-LDO50_RS12265;Dbxref=GenBank:WP_011883785.1;Name=WP_011883785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883785.1;locus_tag=LDO50_RS12265;product=MFS transporter;protein_id=WP_011883785.1;transl_table=11 NZ_CAJZAO010000107.1 RefSeq gene 22430 22768 . - . ID=gene-LDO50_RS12270;Name=LDO50_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12270 NZ_CAJZAO010000107.1 GeneMarkS-2+ CDS 22430 22768 . - 0 ID=cds-WP_224019738.1;Parent=gene-LDO50_RS12270;Dbxref=GenBank:WP_224019738.1;Name=WP_224019738.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS12270;product=hypothetical protein;protein_id=WP_224019738.1;transl_table=11 NZ_CAJZAO010000107.1 RefSeq gene 23015 23197 . + . ID=gene-LDO50_RS12275;Name=LDO50_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12275 NZ_CAJZAO010000107.1 GeneMarkS-2+ CDS 23015 23197 . + 0 ID=cds-WP_224019739.1;Parent=gene-LDO50_RS12275;Dbxref=GenBank:WP_224019739.1;Name=WP_224019739.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS12275;product=hypothetical protein;protein_id=WP_224019739.1;transl_table=11 NZ_CAJZAO010000107.1 RefSeq gene 23277 23984 . - . ID=gene-LDO50_RS12280;Name=LDO50_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12280;old_locus_tag=BVI1335_1950021 NZ_CAJZAO010000107.1 Protein Homology CDS 23277 23984 . - 0 ID=cds-WP_176315524.1;Parent=gene-LDO50_RS12280;Dbxref=GenBank:WP_176315524.1;Name=WP_176315524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485520.1;locus_tag=LDO50_RS12280;product=DUF2968 domain-containing protein;protein_id=WP_176315524.1;transl_table=11 NZ_CAJZAO010000107.1 RefSeq gene 24098 25061 . - . ID=gene-LDO50_RS12285;Name=LDO50_RS12285;end_range=25061,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12285;old_locus_tag=BVI1335_1950022;partial=true NZ_CAJZAO010000107.1 Protein Homology CDS 24098 25061 . - 1 ID=cds-WP_224019740.1;Parent=gene-LDO50_RS12285;Dbxref=GenBank:WP_224019740.1;Name=WP_224019740.1;Ontology_term=GO:0016787,GO:0016811;end_range=25061,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544866.1;locus_tag=LDO50_RS12285;partial=true;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_224019740.1;transl_table=11 ##sequence-region NZ_CAJZAO010000108.1 1 2035 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000108.1 RefSeq region 1 2035 . + . ID=NZ_CAJZAO010000108.1:1..2035;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_196 NZ_CAJZAO010000108.1 RefSeq pseudogene 1 288 . + . ID=gene-LDO50_RS12290;Name=LDO50_RS12290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS12290;old_locus_tag=BVI1335_1960001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000108.1 Protein Homology CDS 1 288 . + 0 ID=cds-LDO50_RS12290;Parent=gene-LDO50_RS12290;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749711.1;locus_tag=LDO50_RS12290;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000108.1 RefSeq gene 529 1206 . + . ID=gene-LDO50_RS12295;Name=LDO50_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12295;old_locus_tag=BVI1335_1960002 NZ_CAJZAO010000108.1 Protein Homology CDS 529 1206 . + 0 ID=cds-WP_011880461.1;Parent=gene-LDO50_RS12295;Dbxref=GenBank:WP_011880461.1;Name=WP_011880461.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411957.1;locus_tag=LDO50_RS12295;product=heavy metal response regulator transcription factor;protein_id=WP_011880461.1;transl_table=11 NZ_CAJZAO010000108.1 RefSeq pseudogene 1203 2035 . + . ID=gene-LDO50_RS12300;Name=LDO50_RS12300;end_range=2035,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS12300;partial=true;pseudo=true NZ_CAJZAO010000108.1 Protein Homology CDS 1203 2035 . + 0 ID=cds-LDO50_RS12300;Parent=gene-LDO50_RS12300;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2035,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726122.1;locus_tag=LDO50_RS12300;partial=true;product=heavy metal sensor histidine kinase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000109.1 1 14388 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000109.1 RefSeq region 1 14388 . + . ID=NZ_CAJZAO010000109.1:1..14388;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_197 NZ_CAJZAO010000109.1 RefSeq gene 1 122 . + . ID=gene-LDO50_RS31470;Name=LDO50_RS31470;end_range=122,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31470;partial=true;start_range=.,1 NZ_CAJZAO010000109.1 Protein Homology CDS 1 122 . + 0 ID=cds-WP_443797766.1;Parent=gene-LDO50_RS31470;Dbxref=GenBank:WP_443797766.1;Name=WP_443797766.1;end_range=122,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416332.1;locus_tag=LDO50_RS31470;partial=true;product=hypothetical protein;protein_id=WP_443797766.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000109.1 RefSeq pseudogene 133 435 . + . ID=gene-LDO50_RS12305;Name=LDO50_RS12305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS12305;old_locus_tag=BVI1335_1970001;partial=true;pseudo=true;start_range=.,133 NZ_CAJZAO010000109.1 Protein Homology CDS 133 435 . + 0 ID=cds-LDO50_RS12305;Parent=gene-LDO50_RS12305;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416332.1;locus_tag=LDO50_RS12305;partial=true;product=DUF72 domain-containing protein;pseudo=true;start_range=.,133;transl_table=11 NZ_CAJZAO010000109.1 RefSeq gene 494 1054 . - . ID=gene-LDO50_RS12310;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=LDO50_RS12310;old_locus_tag=BVI1335_1970002 NZ_CAJZAO010000109.1 Protein Homology CDS 494 1054 . - 0 ID=cds-WP_045579433.1;Parent=gene-LDO50_RS12310;Dbxref=GenBank:WP_045579433.1;Name=WP_045579433.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546062.1;locus_tag=LDO50_RS12310;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_045579433.1;transl_table=11 NZ_CAJZAO010000109.1 RefSeq gene 1291 1485 . + . ID=gene-LDO50_RS12315;Name=LDO50_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12315 NZ_CAJZAO010000109.1 GeneMarkS-2+ CDS 1291 1485 . + 0 ID=cds-WP_155625744.1;Parent=gene-LDO50_RS12315;Dbxref=GenBank:WP_155625744.1;Name=WP_155625744.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS12315;product=hypothetical protein;protein_id=WP_155625744.1;transl_table=11 NZ_CAJZAO010000109.1 RefSeq gene 1596 3002 . + . ID=gene-LDO50_RS12320;Name=LDO50_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12320;old_locus_tag=BVI1335_1970003 NZ_CAJZAO010000109.1 Protein Homology CDS 1596 3002 . + 0 ID=cds-WP_059568371.1;Parent=gene-LDO50_RS12320;Dbxref=GenBank:WP_059568371.1;Name=WP_059568371.1;Ontology_term=GO:0008430;gbkey=CDS;go_function=selenium binding|0008430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896218.1;locus_tag=LDO50_RS12320;product=selenium-binding protein SBP56-related protein;protein_id=WP_059568371.1;transl_table=11 NZ_CAJZAO010000109.1 RefSeq gene 2999 3664 . + . ID=gene-LDO50_RS12325;Name=LDO50_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12325;old_locus_tag=BVI1335_1970004 NZ_CAJZAO010000109.1 Protein Homology CDS 2999 3664 . + 0 ID=cds-WP_014723533.1;Parent=gene-LDO50_RS12325;Dbxref=GenBank:WP_014723533.1;Name=WP_014723533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477994.1;locus_tag=LDO50_RS12325;product=hypothetical protein;protein_id=WP_014723533.1;transl_table=11 NZ_CAJZAO010000109.1 RefSeq gene 4023 4532 . + . ID=gene-LDO50_RS12330;Name=LDO50_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12330 NZ_CAJZAO010000109.1 Protein Homology CDS 4023 4532 . + 0 ID=cds-WP_011885865.1;Parent=gene-LDO50_RS12330;Dbxref=GenBank:WP_011885865.1;Name=WP_011885865.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477993.1;locus_tag=LDO50_RS12330;product=flavin reductase family protein;protein_id=WP_011885865.1;transl_table=11 NZ_CAJZAO010000109.1 RefSeq gene 4519 5019 . - . ID=gene-LDO50_RS12335;Name=LDO50_RS12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12335;old_locus_tag=BVI1335_1970006 NZ_CAJZAO010000109.1 Protein Homology CDS 4519 5019 . - 0 ID=cds-WP_006477992.1;Parent=gene-LDO50_RS12335;Dbxref=GenBank:WP_006477992.1;Name=WP_006477992.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009980145.1;locus_tag=LDO50_RS12335;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_006477992.1;transl_table=11 NZ_CAJZAO010000109.1 RefSeq gene 5150 5791 . + . ID=gene-LDO50_RS12340;Name=kynB;gbkey=Gene;gene=kynB;gene_biotype=protein_coding;locus_tag=LDO50_RS12340;old_locus_tag=BVI1335_1970007 NZ_CAJZAO010000109.1 Protein Homology CDS 5150 5791 . + 0 ID=cds-WP_014723534.1;Parent=gene-LDO50_RS12340;Dbxref=GenBank:WP_014723534.1;Name=WP_014723534.1;Ontology_term=GO:0019441,GO:0004061;gbkey=CDS;gene=kynB;go_function=arylformamidase activity|0004061||IEA;go_process=L-tryptophan catabolic process to kynurenine|0019441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546066.1;locus_tag=LDO50_RS12340;product=arylformamidase;protein_id=WP_014723534.1;transl_table=11 NZ_CAJZAO010000109.1 RefSeq gene 5818 7068 . + . ID=gene-LDO50_RS12345;Name=kynU;gbkey=Gene;gene=kynU;gene_biotype=protein_coding;locus_tag=LDO50_RS12345;old_locus_tag=BVI1335_1970008 NZ_CAJZAO010000109.1 Protein Homology CDS 5818 7068 . + 0 ID=cds-WP_085954491.1;Parent=gene-LDO50_RS12345;Dbxref=GenBank:WP_085954491.1;Name=WP_085954491.1;Ontology_term=GO:0006569,GO:0009435,GO:0030170,GO:0030429,GO:0005737;gbkey=CDS;gene=kynU;go_component=cytoplasm|0005737||IEA;go_function=pyridoxal phosphate binding|0030170||IEA,kynureninase activity|0030429||IEA;go_process=L-tryptophan catabolic process|0006569||IEA,NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004550795.1;locus_tag=LDO50_RS12345;product=kynureninase;protein_id=WP_085954491.1;transl_table=11 NZ_CAJZAO010000109.1 RefSeq gene 7134 8051 . + . ID=gene-LDO50_RS12350;Name=kynA;gbkey=Gene;gene=kynA;gene_biotype=protein_coding;locus_tag=LDO50_RS12350;old_locus_tag=BVI1335_1970009 NZ_CAJZAO010000109.1 Protein Homology CDS 7134 8051 . + 0 ID=cds-WP_011885868.1;Parent=gene-LDO50_RS12350;Dbxref=GenBank:WP_011885868.1;Name=WP_011885868.1;Ontology_term=GO:0019441,GO:0004833;gbkey=CDS;gene=kynA;go_function=tryptophan 2%2C3-dioxygenase activity|0004833||IEA;go_process=L-tryptophan catabolic process to kynurenine|0019441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482479.1;locus_tag=LDO50_RS12350;product=tryptophan 2%2C3-dioxygenase;protein_id=WP_011885868.1;transl_table=11 NZ_CAJZAO010000109.1 RefSeq gene 8461 9855 . + . ID=gene-LDO50_RS12355;Name=dalD;gbkey=Gene;gene=dalD;gene_biotype=protein_coding;locus_tag=LDO50_RS12355;old_locus_tag=BVI1335_1970011 NZ_CAJZAO010000109.1 Protein Homology CDS 8461 9855 . + 0 ID=cds-WP_059897468.1;Parent=gene-LDO50_RS12355;Dbxref=GenBank:WP_059897468.1;Name=WP_059897468.1;Ontology_term=GO:0051161,GO:0047813;gbkey=CDS;gene=dalD;go_function=D-arabinitol 4-dehydrogenase activity|0047813||IEA;go_process=arabitol metabolic process|0051161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492844.1;locus_tag=LDO50_RS12355;product=D-arabinitol 4-dehydrogenase;protein_id=WP_059897468.1;transl_table=11 NZ_CAJZAO010000109.1 RefSeq gene 9991 11472 . + . ID=gene-LDO50_RS12360;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=LDO50_RS12360;old_locus_tag=BVI1335_1970012 NZ_CAJZAO010000109.1 Protein Homology CDS 9991 11472 . + 0 ID=cds-WP_011885870.1;Parent=gene-LDO50_RS12360;Dbxref=GenBank:WP_011885870.1;Name=WP_011885870.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334025.1;locus_tag=LDO50_RS12360;product=xylulokinase;protein_id=WP_011885870.1;transl_table=11 NZ_CAJZAO010000109.1 RefSeq gene 11509 12507 . + . ID=gene-LDO50_RS12365;Name=LDO50_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12365;old_locus_tag=BVI1335_1970013 NZ_CAJZAO010000109.1 Protein Homology CDS 11509 12507 . + 0 ID=cds-WP_174479786.1;Parent=gene-LDO50_RS12365;Dbxref=GenBank:WP_174479786.1;Name=WP_174479786.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885871.1;locus_tag=LDO50_RS12365;product=sugar-binding transcriptional regulator;protein_id=WP_174479786.1;transl_table=11 NZ_CAJZAO010000109.1 RefSeq gene 12708 13817 . - . ID=gene-LDO50_RS12370;Name=LDO50_RS12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12370;old_locus_tag=BVI1335_1970014 NZ_CAJZAO010000109.1 Protein Homology CDS 12708 13817 . - 0 ID=cds-WP_011885872.1;Parent=gene-LDO50_RS12370;Dbxref=GenBank:WP_011885872.1;Name=WP_011885872.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885872.1;locus_tag=LDO50_RS12370;product=ABC transporter ATP-binding protein;protein_id=WP_011885872.1;transl_table=11 NZ_CAJZAO010000109.1 RefSeq gene 13873 14388 . - . ID=gene-LDO50_RS12375;Name=LDO50_RS12375;end_range=14388,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12375;old_locus_tag=BVI1335_1970015;partial=true NZ_CAJZAO010000109.1 Protein Homology CDS 13873 14388 . - 0 ID=cds-WP_224019742.1;Parent=gene-LDO50_RS12375;Dbxref=GenBank:WP_224019742.1;Name=WP_224019742.1;Ontology_term=GO:0008152,GO:0016787;end_range=14388,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398448.1;locus_tag=LDO50_RS12375;partial=true;product=HAD-IA family hydrolase;protein_id=WP_224019742.1;transl_table=11 ##sequence-region NZ_CAJZAO010000110.1 1 537 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000110.1 RefSeq region 1 537 . + . ID=NZ_CAJZAO010000110.1:1..537;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_198 NZ_CAJZAO010000110.1 RefSeq gene 1 256 . - . ID=gene-LDO50_RS31475;Name=LDO50_RS31475;end_range=256,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31475;partial=true;start_range=.,1 NZ_CAJZAO010000110.1 Protein Homology CDS 1 256 . - 0 ID=cds-WP_443797767.1;Parent=gene-LDO50_RS31475;Dbxref=GenBank:WP_443797767.1;Name=WP_443797767.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=256,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492556.1;locus_tag=LDO50_RS31475;partial=true;product=transposase;protein_id=WP_443797767.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000110.1 RefSeq gene 267 537 . - . ID=gene-LDO50_RS31480;Name=LDO50_RS31480;end_range=537,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31480;old_locus_tag=BVI1335_1980002;partial=true;start_range=.,267 NZ_CAJZAO010000110.1 Protein Homology CDS 267 537 . - 2 ID=cds-WP_443797768.1;Parent=gene-LDO50_RS31480;Dbxref=GenBank:WP_443797768.1;Name=WP_443797768.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=537,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492556.1;locus_tag=LDO50_RS31480;partial=true;product=transposase;protein_id=WP_443797768.1;start_range=.,267;transl_table=11 ##sequence-region NZ_CAJZAO010000111.1 1 655 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000111.1 RefSeq region 1 655 . + . ID=NZ_CAJZAO010000111.1:1..655;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_199 NZ_CAJZAO010000111.1 RefSeq gene 1 577 . - . ID=gene-LDO50_RS12385;Name=LDO50_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12385;partial=true;start_range=.,1 NZ_CAJZAO010000111.1 Protein Homology CDS 1 577 . - 0 ID=cds-WP_372586092.1;Parent=gene-LDO50_RS12385;Dbxref=GenBank:WP_372586092.1;Name=WP_372586092.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611775.1;locus_tag=LDO50_RS12385;partial=true;product=transposase;protein_id=WP_372586092.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAO010000112.1 1 87770 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000112.1 RefSeq region 1 87770 . + . ID=NZ_CAJZAO010000112.1:1..87770;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_2 NZ_CAJZAO010000112.1 RefSeq gene 1 1194 . - . ID=gene-LDO50_RS12390;Name=LDO50_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12390;partial=true;start_range=.,1 NZ_CAJZAO010000112.1 Protein Homology CDS 1 1194 . - 0 ID=cds-WP_224019745.1;Parent=gene-LDO50_RS12390;Dbxref=GenBank:WP_224019745.1;Name=WP_224019745.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351102.1;locus_tag=LDO50_RS12390;partial=true;product=pyridoxal-phosphate-dependent aminotransferase family protein;protein_id=WP_224019745.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 1900 2886 . + . ID=gene-LDO50_RS12395;Name=LDO50_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12395;old_locus_tag=BVI1335_20002 NZ_CAJZAO010000112.1 Protein Homology CDS 1900 2886 . + 0 ID=cds-WP_011883449.1;Parent=gene-LDO50_RS12395;Dbxref=GenBank:WP_011883449.1;Name=WP_011883449.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406377.1;locus_tag=LDO50_RS12395;product=LysR family transcriptional regulator;protein_id=WP_011883449.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 2917 3915 . + . ID=gene-LDO50_RS12400;Name=LDO50_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12400;old_locus_tag=BVI1335_20003 NZ_CAJZAO010000112.1 Protein Homology CDS 2917 3915 . + 0 ID=cds-WP_014722522.1;Parent=gene-LDO50_RS12400;Dbxref=GenBank:WP_014722522.1;Name=WP_014722522.1;Ontology_term=GO:0008720,GO:0070404;gbkey=CDS;go_function=D-lactate dehydrogenase (NAD+) activity|0008720||IEA,NADH binding|0070404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496703.1;locus_tag=LDO50_RS12400;product=2-hydroxyacid dehydrogenase;protein_id=WP_014722522.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 4071 4808 . + . ID=gene-LDO50_RS12405;Name=bluB;gbkey=Gene;gene=bluB;gene_biotype=protein_coding;locus_tag=LDO50_RS12405;old_locus_tag=BVI1335_20005 NZ_CAJZAO010000112.1 Protein Homology CDS 4071 4808 . + 0 ID=cds-WP_046426247.1;Parent=gene-LDO50_RS12405;Dbxref=GenBank:WP_046426247.1;Name=WP_046426247.1;Ontology_term=GO:0009236,GO:0032363,GO:0016722;gbkey=CDS;gene=bluB;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,FMN catabolic process|0032363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883447.1;locus_tag=LDO50_RS12405;product=5%2C6-dimethylbenzimidazole synthase;protein_id=WP_046426247.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 5227 6396 . + . ID=gene-LDO50_RS12410;Name=LDO50_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12410;old_locus_tag=BVI1335_20006 NZ_CAJZAO010000112.1 Protein Homology CDS 5227 6396 . + 0 ID=cds-WP_034194475.1;Parent=gene-LDO50_RS12410;Dbxref=GenBank:WP_034194475.1;Name=WP_034194475.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544698.1;locus_tag=LDO50_RS12410;product=MFS transporter;protein_id=WP_034194475.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 6515 7675 . + . ID=gene-LDO50_RS12415;Name=LDO50_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12415;old_locus_tag=BVI1335_20007 NZ_CAJZAO010000112.1 Protein Homology CDS 6515 7675 . + 0 ID=cds-WP_059559021.1;Parent=gene-LDO50_RS12415;Dbxref=GenBank:WP_059559021.1;Name=WP_059559021.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765053.1;locus_tag=LDO50_RS12415;product=MFS transporter;protein_id=WP_059559021.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 7929 9233 . - . ID=gene-LDO50_RS12420;Name=fahA;gbkey=Gene;gene=fahA;gene_biotype=protein_coding;locus_tag=LDO50_RS12420;old_locus_tag=BVI1335_20008 NZ_CAJZAO010000112.1 Protein Homology CDS 7929 9233 . - 0 ID=cds-WP_224019746.1;Parent=gene-LDO50_RS12420;Dbxref=GenBank:WP_224019746.1;Name=WP_224019746.1;Ontology_term=GO:0006559,GO:0006572,GO:0004334;gbkey=CDS;gene=fahA;go_function=fumarylacetoacetase activity|0004334||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,L-tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214027.1;locus_tag=LDO50_RS12420;product=fumarylacetoacetase;protein_id=WP_224019746.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 9230 10564 . - . ID=gene-LDO50_RS12425;Name=hmgA;gbkey=Gene;gene=hmgA;gene_biotype=protein_coding;locus_tag=LDO50_RS12425;old_locus_tag=BVI1335_20009 NZ_CAJZAO010000112.1 Protein Homology CDS 9230 10564 . - 0 ID=cds-WP_011883439.1;Parent=gene-LDO50_RS12425;Dbxref=GenBank:WP_011883439.1;Name=WP_011883439.1;Ontology_term=GO:0006559,GO:0006572,GO:0004411;gbkey=CDS;gene=hmgA;go_function=homogentisate 1%2C2-dioxygenase activity|0004411||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,L-tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214028.1;locus_tag=LDO50_RS12425;product=homogentisate 1%2C2-dioxygenase;protein_id=WP_011883439.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 10580 11941 . - . ID=gene-LDO50_RS12430;Name=LDO50_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12430;old_locus_tag=BVI1335_20010 NZ_CAJZAO010000112.1 Protein Homology CDS 10580 11941 . - 0 ID=cds-WP_045578506.1;Parent=gene-LDO50_RS12430;Dbxref=GenBank:WP_045578506.1;Name=WP_045578506.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722516.1;locus_tag=LDO50_RS12430;product=MFS transporter;protein_id=WP_045578506.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 11938 12168 . - . ID=gene-LDO50_RS12435;Name=LDO50_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12435;old_locus_tag=BVI1335_20011 NZ_CAJZAO010000112.1 Protein Homology CDS 11938 12168 . - 0 ID=cds-WP_011883434.1;Parent=gene-LDO50_RS12435;Dbxref=GenBank:WP_011883434.1;Name=WP_011883434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476783.1;locus_tag=LDO50_RS12435;product=DUF2783 domain-containing protein;protein_id=WP_011883434.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 12209 13885 . - . ID=gene-LDO50_RS12440;Name=LDO50_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12440;old_locus_tag=BVI1335_20012 NZ_CAJZAO010000112.1 Protein Homology CDS 12209 13885 . - 0 ID=cds-WP_059459243.1;Parent=gene-LDO50_RS12440;Dbxref=GenBank:WP_059459243.1;Name=WP_059459243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722515.1;locus_tag=LDO50_RS12440;product=FAD-dependent oxidoreductase;protein_id=WP_059459243.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 13893 14159 . - . ID=gene-LDO50_RS12445;Name=LDO50_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12445 NZ_CAJZAO010000112.1 GeneMarkS-2+ CDS 13893 14159 . - 0 ID=cds-WP_155416633.1;Parent=gene-LDO50_RS12445;Dbxref=GenBank:WP_155416633.1;Name=WP_155416633.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS12445;product=hypothetical protein;protein_id=WP_155416633.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 14288 15091 . + . ID=gene-LDO50_RS12450;Name=LDO50_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12450;old_locus_tag=BVI1335_20015 NZ_CAJZAO010000112.1 Protein Homology CDS 14288 15091 . + 0 ID=cds-WP_011883431.1;Parent=gene-LDO50_RS12450;Dbxref=GenBank:WP_011883431.1;Name=WP_011883431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760627.1;locus_tag=LDO50_RS12450;product=EAL domain-containing protein;protein_id=WP_011883431.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 15644 16054 . - . ID=gene-LDO50_RS12455;Name=LDO50_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12455;old_locus_tag=BVI1335_20016 NZ_CAJZAO010000112.1 Protein Homology CDS 15644 16054 . - 0 ID=cds-WP_045579403.1;Parent=gene-LDO50_RS12455;Dbxref=GenBank:WP_045579403.1;Name=WP_045579403.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476785.1;locus_tag=LDO50_RS12455;product=GFA family protein;protein_id=WP_045579403.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 16180 16971 . - . ID=gene-LDO50_RS12460;Name=LDO50_RS12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12460;old_locus_tag=BVI1335_20017 NZ_CAJZAO010000112.1 Protein Homology CDS 16180 16971 . - 0 ID=cds-WP_011883421.1;Parent=gene-LDO50_RS12460;Dbxref=GenBank:WP_011883421.1;Name=WP_011883421.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760626.1;locus_tag=LDO50_RS12460;product=IclR family transcriptional regulator;protein_id=WP_011883421.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 17094 18281 . + . ID=gene-LDO50_RS12465;Name=LDO50_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12465;old_locus_tag=BVI1335_20018 NZ_CAJZAO010000112.1 Protein Homology CDS 17094 18281 . + 0 ID=cds-WP_011883419.1;Parent=gene-LDO50_RS12465;Dbxref=GenBank:WP_011883419.1;Name=WP_011883419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527638.1;locus_tag=LDO50_RS12465;product=acyl-CoA dehydrogenase;protein_id=WP_011883419.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 18406 19044 . - . ID=gene-LDO50_RS12470;Name=LDO50_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12470;old_locus_tag=BVI1335_20019 NZ_CAJZAO010000112.1 Protein Homology CDS 18406 19044 . - 0 ID=cds-WP_014722511.1;Parent=gene-LDO50_RS12470;Dbxref=GenBank:WP_014722511.1;Name=WP_014722511.1;Ontology_term=GO:0098869,GO:0008379,GO:0051920;gbkey=CDS;go_function=thioredoxin peroxidase activity|0008379||IEA,peroxiredoxin activity|0051920||IEA;go_process=cellular oxidant detoxification|0098869||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003265121.1;locus_tag=LDO50_RS12470;product=peroxiredoxin;protein_id=WP_014722511.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 19362 19664 . + . ID=gene-LDO50_RS12475;Name=LDO50_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12475;old_locus_tag=BVI1335_20020 NZ_CAJZAO010000112.1 Protein Homology CDS 19362 19664 . + 0 ID=cds-WP_011883416.1;Parent=gene-LDO50_RS12475;Dbxref=GenBank:WP_011883416.1;Name=WP_011883416.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883416.1;locus_tag=LDO50_RS12475;product=DUF883 family protein;protein_id=WP_011883416.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 19789 20178 . + . ID=gene-LDO50_RS12480;Name=LDO50_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12480;old_locus_tag=BVI1335_20021 NZ_CAJZAO010000112.1 Protein Homology CDS 19789 20178 . + 0 ID=cds-WP_011883414.1;Parent=gene-LDO50_RS12480;Dbxref=GenBank:WP_011883414.1;Name=WP_011883414.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185460.1;locus_tag=LDO50_RS12480;product=phage holin family protein;protein_id=WP_011883414.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 20222 20665 . + . ID=gene-LDO50_RS12485;Name=LDO50_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12485;old_locus_tag=BVI1335_20022 NZ_CAJZAO010000112.1 Protein Homology CDS 20222 20665 . + 0 ID=cds-WP_011883413.1;Parent=gene-LDO50_RS12485;Dbxref=GenBank:WP_011883413.1;Name=WP_011883413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484985.1;locus_tag=LDO50_RS12485;product=DUF3318 domain-containing protein;protein_id=WP_011883413.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 20718 21170 . - . ID=gene-LDO50_RS12490;Name=LDO50_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12490;old_locus_tag=BVI1335_20023 NZ_CAJZAO010000112.1 Protein Homology CDS 20718 21170 . - 0 ID=cds-WP_041493936.1;Parent=gene-LDO50_RS12490;Dbxref=GenBank:WP_041493936.1;Name=WP_041493936.1;Ontology_term=GO:0043683,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883412.1;locus_tag=LDO50_RS12490;product=type IV pilin protein;protein_id=WP_041493936.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 21170 21628 . - . ID=gene-LDO50_RS12495;Name=LDO50_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12495;old_locus_tag=BVI1335_20024 NZ_CAJZAO010000112.1 Protein Homology CDS 21170 21628 . - 0 ID=cds-WP_011883410.1;Parent=gene-LDO50_RS12495;Dbxref=GenBank:WP_011883410.1;Name=WP_011883410.1;Ontology_term=GO:0043683;gbkey=CDS;go_process=type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722508.1;locus_tag=LDO50_RS12495;product=pilus assembly PilX family protein;protein_id=WP_011883410.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 21826 22659 . - . ID=gene-LDO50_RS12500;Name=LDO50_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12500;old_locus_tag=BVI1335_20025 NZ_CAJZAO010000112.1 Protein Homology CDS 21826 22659 . - 0 ID=cds-WP_014722506.1;Parent=gene-LDO50_RS12500;Dbxref=GenBank:WP_014722506.1;Name=WP_014722506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883409.1;locus_tag=LDO50_RS12500;product=type IV pillus assembly protein;protein_id=WP_014722506.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 22649 23071 . - . ID=gene-LDO50_RS12505;Name=LDO50_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12505;old_locus_tag=BVI1335_20026 NZ_CAJZAO010000112.1 Protein Homology CDS 22649 23071 . - 0 ID=cds-WP_045578510.1;Parent=gene-LDO50_RS12505;Dbxref=GenBank:WP_045578510.1;Name=WP_045578510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417101.1;locus_tag=LDO50_RS12505;product=hypothetical protein;protein_id=WP_045578510.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 23068 23628 . - . ID=gene-LDO50_RS12510;Name=LDO50_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12510;old_locus_tag=BVI1335_20027 NZ_CAJZAO010000112.1 Protein Homology CDS 23068 23628 . - 0 ID=cds-WP_011883405.1;Parent=gene-LDO50_RS12510;Dbxref=GenBank:WP_011883405.1;Name=WP_011883405.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754598.1;locus_tag=LDO50_RS12510;product=GspH/FimT family pseudopilin;protein_id=WP_011883405.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 23800 24279 . - . ID=gene-LDO50_RS12515;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=LDO50_RS12515;old_locus_tag=BVI1335_20028 NZ_CAJZAO010000112.1 Protein Homology CDS 23800 24279 . - 0 ID=cds-WP_006760615.1;Parent=gene-LDO50_RS12515;Dbxref=GenBank:WP_006760615.1;Name=WP_006760615.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476792.1;locus_tag=LDO50_RS12515;product=transcriptional regulator NrdR;protein_id=WP_006760615.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq pseudogene 24286 24812 . - . ID=gene-LDO50_RS31485;Name=glyA;end_range=24812,.;gbkey=Gene;gene=glyA;gene_biotype=pseudogene;locus_tag=LDO50_RS31485;old_locus_tag=BVI1335_20029;partial=true;pseudo=true NZ_CAJZAO010000112.1 Protein Homology CDS 24286 24812 . - 2 ID=cds-LDO50_RS31485;Parent=gene-LDO50_RS31485;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=24812,.;gbkey=CDS;gene=glyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018442488.1;locus_tag=LDO50_RS31485;partial=true;product=serine hydroxymethyltransferase;pseudo=true;transl_table=11 NZ_CAJZAO010000112.1 RefSeq pseudogene 24823 25406 . - . ID=gene-LDO50_RS31490;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=pseudogene;locus_tag=LDO50_RS31490;old_locus_tag=BVI1335_20030;partial=true;pseudo=true;start_range=.,24823 NZ_CAJZAO010000112.1 Protein Homology CDS 24823 25406 . - 0 ID=cds-LDO50_RS31490;Parent=gene-LDO50_RS31490;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate%3B frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=glyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018442488.1;locus_tag=LDO50_RS31490;partial=true;product=serine hydroxymethyltransferase;pseudo=true;start_range=.,24823;transl_table=11 NZ_CAJZAO010000112.1 cmsearch riboswitch 25544 25644 . - . ID=id-NZ_CAJZAO010000112.1:25544..25644;Dbxref=RFAM:RF01750;Note=ZMP/ZTP riboswitches appear to regulate genes involved in one-carbon metabolism;bound_moiety=5-aminoimidazole-4-carboxamide ribonucleotide (ZMP)/ 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-triphosphate (ZMT);gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAO010000112.1 RefSeq gene 25825 26571 . + . ID=gene-LDO50_RS12525;Name=LDO50_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12525;old_locus_tag=BVI1335_20032 NZ_CAJZAO010000112.1 Protein Homology CDS 25825 26571 . + 0 ID=cds-WP_011883400.1;Parent=gene-LDO50_RS12525;Dbxref=GenBank:WP_011883400.1;Name=WP_011883400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696778.1;locus_tag=LDO50_RS12525;product=SDR family oxidoreductase;protein_id=WP_011883400.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 26681 27151 . + . ID=gene-LDO50_RS12530;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=LDO50_RS12530;old_locus_tag=BVI1335_20033 NZ_CAJZAO010000112.1 Protein Homology CDS 26681 27151 . + 0 ID=cds-WP_059605673.1;Parent=gene-LDO50_RS12530;Dbxref=GenBank:WP_059605673.1;Name=WP_059605673.1;Ontology_term=GO:0047617,GO:0005737;gbkey=CDS;gene=ybgC;go_component=cytoplasm|0005737||IEA;go_function=fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091491.1;locus_tag=LDO50_RS12530;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_059605673.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 27285 27962 . + . ID=gene-LDO50_RS12535;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=LDO50_RS12535;old_locus_tag=BVI1335_20034 NZ_CAJZAO010000112.1 Protein Homology CDS 27285 27962 . + 0 ID=cds-WP_011883396.1;Parent=gene-LDO50_RS12535;Dbxref=GenBank:WP_011883396.1;Name=WP_011883396.1;Ontology_term=GO:0043213,GO:0016020;gbkey=CDS;gene=tolQ;go_component=membrane|0016020||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091489.1;locus_tag=LDO50_RS12535;product=protein TolQ;protein_id=WP_011883396.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 27973 28422 . + . ID=gene-LDO50_RS12540;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=LDO50_RS12540;old_locus_tag=BVI1335_20035 NZ_CAJZAO010000112.1 Protein Homology CDS 27973 28422 . + 0 ID=cds-WP_011883394.1;Parent=gene-LDO50_RS12540;Dbxref=GenBank:WP_011883394.1;Name=WP_011883394.1;Ontology_term=GO:0061024,GO:1902600,GO:0015078,GO:0098567;gbkey=CDS;gene=tolR;go_component=periplasmic side of plasma membrane|0098567||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=membrane organization|0061024||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194863.1;locus_tag=LDO50_RS12540;product=protein TolR;protein_id=WP_011883394.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 28419 29486 . + . ID=gene-LDO50_RS12545;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=LDO50_RS12545;old_locus_tag=BVI1335_20036 NZ_CAJZAO010000112.1 Protein Homology CDS 28419 29486 . + 0 ID=cds-WP_224019747.1;Parent=gene-LDO50_RS12545;Dbxref=GenBank:WP_224019747.1;Name=WP_224019747.1;Ontology_term=GO:0006810,GO:0005215,GO:0098567;gbkey=CDS;gene=tolA;go_component=periplasmic side of plasma membrane|0098567||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406396.1;locus_tag=LDO50_RS12545;product=cell envelope integrity protein TolA;protein_id=WP_224019747.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 29596 30891 . + . ID=gene-LDO50_RS12550;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=LDO50_RS12550;old_locus_tag=BVI1335_20037 NZ_CAJZAO010000112.1 Protein Homology CDS 29596 30891 . + 0 ID=cds-WP_011883392.1;Parent=gene-LDO50_RS12550;Dbxref=GenBank:WP_011883392.1;Name=WP_011883392.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351073.1;locus_tag=LDO50_RS12550;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_011883392.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 30911 31423 . + . ID=gene-LDO50_RS12555;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=LDO50_RS12555;old_locus_tag=BVI1335_20038 NZ_CAJZAO010000112.1 Protein Homology CDS 30911 31423 . + 0 ID=cds-WP_011883386.1;Parent=gene-LDO50_RS12555;Dbxref=GenBank:WP_011883386.1;Name=WP_011883386.1;Ontology_term=GO:0009279;gbkey=CDS;gene=pal;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186227.1;locus_tag=LDO50_RS12555;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_011883386.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 31443 32192 . + . ID=gene-LDO50_RS12560;Name=ybgF;gbkey=Gene;gene=ybgF;gene_biotype=protein_coding;locus_tag=LDO50_RS12560;old_locus_tag=BVI1335_20039 NZ_CAJZAO010000112.1 Protein Homology CDS 31443 32192 . + 0 ID=cds-WP_011883385.1;Parent=gene-LDO50_RS12560;Dbxref=GenBank:WP_011883385.1;Name=WP_011883385.1;Ontology_term=GO:0005515;gbkey=CDS;gene=ybgF;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025426.1;locus_tag=LDO50_RS12560;product=tol-pal system protein YbgF;protein_id=WP_011883385.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 32251 32326 . + . ID=gene-LDO50_RS12565;Name=LDO50_RS12565;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS12565;old_locus_tag=BVI1335_TRNA1 NZ_CAJZAO010000112.1 tRNAscan-SE tRNA 32251 32326 . + . ID=rna-LDO50_RS12565;Parent=gene-LDO50_RS12565;anticodon=(pos:32284..32286);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS12565;product=tRNA-Lys NZ_CAJZAO010000112.1 tRNAscan-SE exon 32251 32326 . + . ID=exon-LDO50_RS12565-1;Parent=rna-LDO50_RS12565;anticodon=(pos:32284..32286);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS12565;product=tRNA-Lys NZ_CAJZAO010000112.1 RefSeq gene 32932 33261 . + . ID=gene-LDO50_RS12570;Name=LDO50_RS12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12570;old_locus_tag=BVI1335_20042 NZ_CAJZAO010000112.1 Protein Homology CDS 32932 33261 . + 0 ID=cds-WP_011883382.1;Parent=gene-LDO50_RS12570;Dbxref=GenBank:WP_011883382.1;Name=WP_011883382.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883382.1;locus_tag=LDO50_RS12570;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_011883382.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 33378 34211 . + . ID=gene-LDO50_RS12575;Name=LDO50_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12575;old_locus_tag=BVI1335_20043 NZ_CAJZAO010000112.1 Protein Homology CDS 33378 34211 . + 0 ID=cds-WP_046425637.1;Parent=gene-LDO50_RS12575;Dbxref=GenBank:WP_046425637.1;Name=WP_046425637.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883381.1;locus_tag=LDO50_RS12575;product=class II glutamine amidotransferase;protein_id=WP_046425637.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 34358 34720 . + . ID=gene-LDO50_RS12580;Name=LDO50_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12580 NZ_CAJZAO010000112.1 GeneMarkS-2+ CDS 34358 34720 . + 0 ID=cds-WP_155416619.1;Parent=gene-LDO50_RS12580;Dbxref=GenBank:WP_155416619.1;Name=WP_155416619.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS12580;product=hypothetical protein;protein_id=WP_155416619.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 34717 35304 . + . ID=gene-LDO50_RS12585;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=LDO50_RS12585;old_locus_tag=BVI1335_20047 NZ_CAJZAO010000112.1 Protein Homology CDS 34717 35304 . + 0 ID=cds-WP_224019748.1;Parent=gene-LDO50_RS12585;Dbxref=GenBank:WP_224019748.1;Name=WP_224019748.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722495.1;locus_tag=LDO50_RS12585;product=adenylyl-sulfate kinase;protein_id=WP_224019748.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 35548 36231 . - . ID=gene-LDO50_RS12590;Name=LDO50_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12590;old_locus_tag=BVI1335_20048 NZ_CAJZAO010000112.1 Protein Homology CDS 35548 36231 . - 0 ID=cds-WP_014722494.1;Parent=gene-LDO50_RS12590;Dbxref=GenBank:WP_014722494.1;Name=WP_014722494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351038.1;locus_tag=LDO50_RS12590;product=DedA family protein;protein_id=WP_014722494.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 36406 38451 . + . ID=gene-LDO50_RS12595;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=LDO50_RS12595;old_locus_tag=BVI1335_20049 NZ_CAJZAO010000112.1 Protein Homology CDS 36406 38451 . + 0 ID=cds-WP_011883375.1;Parent=gene-LDO50_RS12595;Dbxref=GenBank:WP_011883375.1;Name=WP_011883375.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656051.1;locus_tag=LDO50_RS12595;product=DNA mismatch repair endonuclease MutL;protein_id=WP_011883375.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 38448 39422 . + . ID=gene-LDO50_RS12600;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=LDO50_RS12600;old_locus_tag=BVI1335_20050 NZ_CAJZAO010000112.1 Protein Homology CDS 38448 39422 . + 0 ID=cds-WP_059560962.1;Parent=gene-LDO50_RS12600;Dbxref=GenBank:WP_059560962.1;Name=WP_059560962.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883374.1;locus_tag=LDO50_RS12600;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_059560962.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq pseudogene 39449 39816 . - . ID=gene-LDO50_RS12605;Name=LDO50_RS12605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS12605;old_locus_tag=BVI1335_20051;pseudo=true NZ_CAJZAO010000112.1 Protein Homology CDS 39449 39816 . - 0 ID=cds-LDO50_RS12605;Parent=gene-LDO50_RS12605;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214072.1;locus_tag=LDO50_RS12605;product=YybH family protein;pseudo=true;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 39924 40979 . - . ID=gene-LDO50_RS12610;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=LDO50_RS12610;old_locus_tag=BVI1335_20052 NZ_CAJZAO010000112.1 Protein Homology CDS 39924 40979 . - 0 ID=cds-WP_011883372.1;Parent=gene-LDO50_RS12610;Dbxref=GenBank:WP_011883372.1;Name=WP_011883372.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010116949.1;locus_tag=LDO50_RS12610;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_011883372.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 41230 41964 . + . ID=gene-LDO50_RS12615;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=LDO50_RS12615;old_locus_tag=BVI1335_20053 NZ_CAJZAO010000112.1 Protein Homology CDS 41230 41964 . + 0 ID=cds-WP_011883371.1;Parent=gene-LDO50_RS12615;Dbxref=GenBank:WP_011883371.1;Name=WP_011883371.1;Ontology_term=GO:0032297,GO:0016818;gbkey=CDS;gene=hda;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333268.1;locus_tag=LDO50_RS12615;product=DnaA regulatory inactivator Hda;protein_id=WP_011883371.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 41976 42653 . + . ID=gene-LDO50_RS12620;Name=LDO50_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12620;old_locus_tag=BVI1335_20054 NZ_CAJZAO010000112.1 Protein Homology CDS 41976 42653 . + 0 ID=cds-WP_011883370.1;Parent=gene-LDO50_RS12620;Dbxref=GenBank:WP_011883370.1;Name=WP_011883370.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401594.1;locus_tag=LDO50_RS12620;product=HAD family hydrolase;protein_id=WP_011883370.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 42659 44212 . + . ID=gene-LDO50_RS12625;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=LDO50_RS12625;old_locus_tag=BVI1335_20055 NZ_CAJZAO010000112.1 Protein Homology CDS 42659 44212 . + 0 ID=cds-WP_176300836.1;Parent=gene-LDO50_RS12625;Dbxref=GenBank:WP_176300836.1;Name=WP_176300836.1;Ontology_term=GO:0043633,GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;go_process=polyadenylation-dependent RNA catabolic process|0043633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214075.1;locus_tag=LDO50_RS12625;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_176300836.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 44246 44788 . + . ID=gene-LDO50_RS12630;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=LDO50_RS12630;old_locus_tag=BVI1335_20056 NZ_CAJZAO010000112.1 Protein Homology CDS 44246 44788 . + 0 ID=cds-WP_034194455.1;Parent=gene-LDO50_RS12630;Dbxref=GenBank:WP_034194455.1;Name=WP_034194455.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025371.1;locus_tag=LDO50_RS12630;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_034194455.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 44785 45471 . + . ID=gene-LDO50_RS12635;Name=LDO50_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12635;old_locus_tag=BVI1335_20057 NZ_CAJZAO010000112.1 Protein Homology CDS 44785 45471 . + 0 ID=cds-WP_014722489.1;Parent=gene-LDO50_RS12635;Dbxref=GenBank:WP_014722489.1;Name=WP_014722489.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656042.1;locus_tag=LDO50_RS12635;product=deoxynucleoside kinase;protein_id=WP_014722489.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 45519 46334 . + . ID=gene-LDO50_RS12640;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=LDO50_RS12640;old_locus_tag=BVI1335_20058 NZ_CAJZAO010000112.1 Protein Homology CDS 45519 46334 . + 0 ID=cds-WP_011883363.1;Parent=gene-LDO50_RS12640;Dbxref=GenBank:WP_011883363.1;Name=WP_011883363.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351027.1;locus_tag=LDO50_RS12640;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_011883363.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 46451 48487 . - . ID=gene-LDO50_RS12645;Name=LDO50_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12645;old_locus_tag=BVI1335_20059 NZ_CAJZAO010000112.1 Protein Homology CDS 46451 48487 . - 0 ID=cds-WP_224019749.1;Parent=gene-LDO50_RS12645;Dbxref=GenBank:WP_224019749.1;Name=WP_224019749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722487.1;locus_tag=LDO50_RS12645;product=chorismate-binding protein;protein_id=WP_224019749.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 48492 49628 . - . ID=gene-LDO50_RS12650;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=LDO50_RS12650;old_locus_tag=BVI1335_20060 NZ_CAJZAO010000112.1 Protein Homology CDS 48492 49628 . - 0 ID=cds-WP_034194453.1;Parent=gene-LDO50_RS12650;Dbxref=GenBank:WP_034194453.1;Name=WP_034194453.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417099.1;locus_tag=LDO50_RS12650;product=molecular chaperone DnaJ;protein_id=WP_034194453.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 49885 51837 . - . ID=gene-LDO50_RS12655;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=LDO50_RS12655;old_locus_tag=BVI1335_20062 NZ_CAJZAO010000112.1 Protein Homology CDS 49885 51837 . - 0 ID=cds-WP_011883357.1;Parent=gene-LDO50_RS12655;Dbxref=GenBank:WP_011883357.1;Name=WP_011883357.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013088502.1;locus_tag=LDO50_RS12655;product=molecular chaperone DnaK;protein_id=WP_011883357.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 51985 52416 . - . ID=gene-LDO50_RS12660;Name=LDO50_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12660;old_locus_tag=BVI1335_20064 NZ_CAJZAO010000112.1 Protein Homology CDS 51985 52416 . - 0 ID=cds-WP_224019750.1;Parent=gene-LDO50_RS12660;Dbxref=GenBank:WP_224019750.1;Name=WP_224019750.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214078.1;locus_tag=LDO50_RS12660;product=thioredoxin family protein;protein_id=WP_224019750.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 52427 52972 . - . ID=gene-LDO50_RS12665;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=LDO50_RS12665;old_locus_tag=BVI1335_20065 NZ_CAJZAO010000112.1 Protein Homology CDS 52427 52972 . - 0 ID=cds-WP_011883354.1;Parent=gene-LDO50_RS12665;Dbxref=GenBank:WP_011883354.1;Name=WP_011883354.1;Ontology_term=GO:0006457,GO:0000774,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein-folding chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194243.1;locus_tag=LDO50_RS12665;product=nucleotide exchange factor GrpE;protein_id=WP_011883354.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 53300 53461 . + . ID=gene-LDO50_RS12670;Name=LDO50_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12670;old_locus_tag=BVI1335_20066 NZ_CAJZAO010000112.1 Protein Homology CDS 53300 53461 . + 0 ID=cds-WP_011883353.1;Parent=gene-LDO50_RS12670;Dbxref=GenBank:WP_011883353.1;Name=WP_011883353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194079.1;locus_tag=LDO50_RS12670;product=hypothetical protein;protein_id=WP_011883353.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 53433 53840 . - . ID=gene-LDO50_RS12675;Name=LDO50_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12675;old_locus_tag=BVI1335_20067 NZ_CAJZAO010000112.1 Protein Homology CDS 53433 53840 . - 0 ID=cds-WP_034194465.1;Parent=gene-LDO50_RS12675;Dbxref=GenBank:WP_034194465.1;Name=WP_034194465.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401607.1;locus_tag=LDO50_RS12675;product=RNA-binding S4 domain-containing protein;protein_id=WP_034194465.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 53846 54910 . - . ID=gene-LDO50_RS12680;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=LDO50_RS12680;old_locus_tag=BVI1335_20068 NZ_CAJZAO010000112.1 Protein Homology CDS 53846 54910 . - 0 ID=cds-WP_011883349.1;Parent=gene-LDO50_RS12680;Dbxref=GenBank:WP_011883349.1;Name=WP_011883349.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694160.1;locus_tag=LDO50_RS12680;product=ferrochelatase;protein_id=WP_011883349.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 55059 56081 . - . ID=gene-LDO50_RS12685;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=LDO50_RS12685;old_locus_tag=BVI1335_20069 NZ_CAJZAO010000112.1 Protein Homology CDS 55059 56081 . - 0 ID=cds-WP_011883347.1;Parent=gene-LDO50_RS12685;Dbxref=GenBank:WP_011883347.1;Name=WP_011883347.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=hrcA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752732.1;locus_tag=LDO50_RS12685;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_011883347.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 56212 57114 . + . ID=gene-LDO50_RS12690;Name=LDO50_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12690;old_locus_tag=BVI1335_20070 NZ_CAJZAO010000112.1 Protein Homology CDS 56212 57114 . + 0 ID=cds-WP_011883345.1;Parent=gene-LDO50_RS12690;Dbxref=GenBank:WP_011883345.1;Name=WP_011883345.1;Ontology_term=GO:0019674,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NAD+ metabolic process|0019674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883345.1;locus_tag=LDO50_RS12690;product=NAD kinase;protein_id=WP_011883345.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 57134 58783 . + . ID=gene-LDO50_RS12695;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=LDO50_RS12695;old_locus_tag=BVI1335_20071 NZ_CAJZAO010000112.1 Protein Homology CDS 57134 58783 . + 0 ID=cds-WP_014722483.1;Parent=gene-LDO50_RS12695;Dbxref=GenBank:WP_014722483.1;Name=WP_014722483.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889240.1;locus_tag=LDO50_RS12695;product=DNA repair protein RecN;protein_id=WP_014722483.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 59183 61984 . - . ID=gene-LDO50_RS12700;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=LDO50_RS12700;old_locus_tag=BVI1335_20072 NZ_CAJZAO010000112.1 Protein Homology CDS 59183 61984 . - 0 ID=cds-WP_224019751.1;Parent=gene-LDO50_RS12700;Dbxref=GenBank:WP_224019751.1;Name=WP_224019751.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497495.1;locus_tag=LDO50_RS12700;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_224019751.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 62219 66430 . + . ID=gene-LDO50_RS12705;Name=LDO50_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12705;old_locus_tag=BVI1335_20073 NZ_CAJZAO010000112.1 Protein Homology CDS 62219 66430 . + 0 ID=cds-WP_175657737.1;Parent=gene-LDO50_RS12705;Dbxref=GenBank:WP_175657737.1;Name=WP_175657737.1;Ontology_term=GO:0015914,GO:0055085,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=phospholipid transport|0015914||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752728.1;locus_tag=LDO50_RS12705;product=YhdP family phospholipid transporter;protein_id=WP_175657737.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 66482 67309 . + . ID=gene-LDO50_RS12710;Name=LDO50_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12710;old_locus_tag=BVI1335_20074 NZ_CAJZAO010000112.1 Protein Homology CDS 66482 67309 . + 0 ID=cds-WP_224019752.1;Parent=gene-LDO50_RS12710;Dbxref=GenBank:WP_224019752.1;Name=WP_224019752.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883340.1;locus_tag=LDO50_RS12710;product=carbon-nitrogen hydrolase family protein;protein_id=WP_224019752.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 67396 68862 . + . ID=gene-LDO50_RS12715;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=LDO50_RS12715;old_locus_tag=BVI1335_20075 NZ_CAJZAO010000112.1 Protein Homology CDS 67396 68862 . + 0 ID=cds-WP_011883338.1;Parent=gene-LDO50_RS12715;Dbxref=GenBank:WP_011883338.1;Name=WP_011883338.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012431786.1;locus_tag=LDO50_RS12715;product=metalloprotease TldD;protein_id=WP_011883338.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 69258 70331 . + . ID=gene-LDO50_RS12720;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=LDO50_RS12720;old_locus_tag=BVI1335_20076 NZ_CAJZAO010000112.1 Protein Homology CDS 69258 70331 . + 0 ID=cds-WP_011883337.1;Parent=gene-LDO50_RS12720;Dbxref=GenBank:WP_011883337.1;Name=WP_011883337.1;Ontology_term=GO:0009073,GO:0003849;gbkey=CDS;gene=aroG;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013587169.1;locus_tag=LDO50_RS12720;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_011883337.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 70458 71666 . - . ID=gene-LDO50_RS12725;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=LDO50_RS12725;old_locus_tag=BVI1335_20077 NZ_CAJZAO010000112.1 Protein Homology CDS 70458 71666 . - 0 ID=cds-WP_011883334.1;Parent=gene-LDO50_RS12725;Dbxref=GenBank:WP_011883334.1;Name=WP_011883334.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106227.1;locus_tag=LDO50_RS12725;product=NO-inducible flavohemoprotein;protein_id=WP_011883334.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 71756 72307 . - . ID=gene-LDO50_RS12730;Name=LDO50_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12730;old_locus_tag=BVI1335_20078 NZ_CAJZAO010000112.1 Protein Homology CDS 71756 72307 . - 0 ID=cds-WP_011883333.1;Parent=gene-LDO50_RS12730;Dbxref=GenBank:WP_011883333.1;Name=WP_011883333.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544630.1;locus_tag=LDO50_RS12730;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_011883333.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 72448 73857 . + . ID=gene-LDO50_RS12735;Name=LDO50_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12735;old_locus_tag=BVI1335_20080 NZ_CAJZAO010000112.1 Protein Homology CDS 72448 73857 . + 0 ID=cds-WP_059461806.1;Parent=gene-LDO50_RS12735;Dbxref=GenBank:WP_059461806.1;Name=WP_059461806.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656021.1;locus_tag=LDO50_RS12735;product=FAD-binding oxidoreductase;protein_id=WP_059461806.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 73895 75388 . + . ID=gene-LDO50_RS12740;Name=LDO50_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12740;old_locus_tag=BVI1335_20081 NZ_CAJZAO010000112.1 Protein Homology CDS 73895 75388 . + 0 ID=cds-WP_224019753.1;Parent=gene-LDO50_RS12740;Dbxref=GenBank:WP_224019753.1;Name=WP_224019753.1;Ontology_term=GO:0003824,GO:0050660;gbkey=CDS;go_function=catalytic activity|0003824||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009913510.1;locus_tag=LDO50_RS12740;product=FAD-linked oxidase C-terminal domain-containing protein;protein_id=WP_224019753.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 75507 76595 . + . ID=gene-LDO50_RS12745;Name=glcE;gbkey=Gene;gene=glcE;gene_biotype=protein_coding;locus_tag=LDO50_RS12745;old_locus_tag=BVI1335_20082 NZ_CAJZAO010000112.1 Protein Homology CDS 75507 76595 . + 0 ID=cds-WP_059736013.1;Parent=gene-LDO50_RS12745;Dbxref=GenBank:WP_059736013.1;Name=WP_059736013.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=glcE;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333241.1;locus_tag=LDO50_RS12745;product=glycolate oxidase subunit GlcE;protein_id=WP_059736013.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 76597 77823 . + . ID=gene-LDO50_RS12750;Name=glcF;gbkey=Gene;gene=glcF;gene_biotype=protein_coding;locus_tag=LDO50_RS12750;old_locus_tag=BVI1335_20083 NZ_CAJZAO010000112.1 Protein Homology CDS 76597 77823 . + 0 ID=cds-WP_011883329.1;Parent=gene-LDO50_RS12750;Dbxref=GenBank:WP_011883329.1;Name=WP_011883329.1;Ontology_term=GO:0051536;gbkey=CDS;gene=glcF;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194146.1;locus_tag=LDO50_RS12750;product=glycolate oxidase subunit GlcF;protein_id=WP_011883329.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 77961 78659 . + . ID=gene-LDO50_RS12755;Name=LDO50_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12755;old_locus_tag=BVI1335_20084 NZ_CAJZAO010000112.1 Protein Homology CDS 77961 78659 . + 0 ID=cds-WP_011883328.1;Parent=gene-LDO50_RS12755;Dbxref=GenBank:WP_011883328.1;Name=WP_011883328.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363137.1;locus_tag=LDO50_RS12755;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_011883328.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 78705 79517 . + . ID=gene-LDO50_RS12760;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=LDO50_RS12760;old_locus_tag=BVI1335_20085 NZ_CAJZAO010000112.1 Protein Homology CDS 78705 79517 . + 0 ID=cds-WP_059455140.1;Parent=gene-LDO50_RS12760;Dbxref=GenBank:WP_059455140.1;Name=WP_059455140.1;Ontology_term=GO:0055129,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004550016.1;locus_tag=LDO50_RS12760;product=pyrroline-5-carboxylate reductase;protein_id=WP_059455140.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 79641 80513 . - . ID=gene-LDO50_RS12765;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=LDO50_RS12765;old_locus_tag=BVI1335_20086 NZ_CAJZAO010000112.1 Protein Homology CDS 79641 80513 . - 0 ID=cds-WP_224019754.1;Parent=gene-LDO50_RS12765;Dbxref=GenBank:WP_224019754.1;Name=WP_224019754.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656015.1;locus_tag=LDO50_RS12765;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_224019754.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 80903 81391 . - . ID=gene-LDO50_RS12770;Name=dpsA;gbkey=Gene;gene=dpsA;gene_biotype=protein_coding;locus_tag=LDO50_RS12770;old_locus_tag=BVI1335_20087 NZ_CAJZAO010000112.1 Protein Homology CDS 80903 81391 . - 0 ID=cds-WP_011883325.1;Parent=gene-LDO50_RS12770;Dbxref=GenBank:WP_011883325.1;Name=WP_011883325.1;gbkey=CDS;gene=dpsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200519.1;locus_tag=LDO50_RS12770;product=non-specific DNA-binding protein DpsA;protein_id=WP_011883325.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 81550 81699 . - . ID=gene-LDO50_RS12775;Name=LDO50_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12775;old_locus_tag=BVI1335_20088 NZ_CAJZAO010000112.1 Protein Homology CDS 81550 81699 . - 0 ID=cds-WP_011883324.1;Parent=gene-LDO50_RS12775;Dbxref=GenBank:WP_011883324.1;Name=WP_011883324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883324.1;locus_tag=LDO50_RS12775;product=hypothetical protein;protein_id=WP_011883324.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 81808 83994 . - . ID=gene-LDO50_RS12780;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=LDO50_RS12780;old_locus_tag=BVI1335_20089 NZ_CAJZAO010000112.1 Protein Homology CDS 81808 83994 . - 0 ID=cds-WP_059455158.1;Parent=gene-LDO50_RS12780;Dbxref=GenBank:WP_059455158.1;Name=WP_059455158.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327929.1;locus_tag=LDO50_RS12780;product=catalase/peroxidase HPI;protein_id=WP_059455158.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 84487 85446 . - . ID=gene-LDO50_RS12785;Name=LDO50_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12785;old_locus_tag=BVI1335_20091 NZ_CAJZAO010000112.1 Protein Homology CDS 84487 85446 . - 0 ID=cds-WP_011883322.1;Parent=gene-LDO50_RS12785;Dbxref=GenBank:WP_011883322.1;Name=WP_011883322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333233.1;locus_tag=LDO50_RS12785;product=LysR substrate-binding domain-containing protein;protein_id=WP_011883322.1;transl_table=11 NZ_CAJZAO010000112.1 RefSeq gene 85584 87770 . - . ID=gene-LDO50_RS12790;Name=recG;end_range=87770,.;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=LDO50_RS12790;old_locus_tag=BVI1335_20092;partial=true NZ_CAJZAO010000112.1 Protein Homology CDS 85584 87770 . - 0 ID=cds-WP_224019755.1;Parent=gene-LDO50_RS12790;Dbxref=GenBank:WP_224019755.1;Name=WP_224019755.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678;end_range=87770,.;gbkey=CDS;gene=recG;go_function=DNA helicase activity|0003678||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544622.1;locus_tag=LDO50_RS12790;partial=true;product=ATP-dependent DNA helicase RecG;protein_id=WP_224019755.1;transl_table=11 ##sequence-region NZ_CAJZAO010000113.1 1 52314 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000113.1 RefSeq region 1 52314 . + . ID=NZ_CAJZAO010000113.1:1..52314;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_20 NZ_CAJZAO010000113.1 RefSeq gene 1 3478 . - . ID=gene-LDO50_RS12795;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=LDO50_RS12795;partial=true;start_range=.,1 NZ_CAJZAO010000113.1 Protein Homology CDS 1 3478 . - 0 ID=cds-WP_224019756.1;Parent=gene-LDO50_RS12795;Dbxref=GenBank:WP_224019756.1;Name=WP_224019756.1;Ontology_term=GO:0006355,GO:0055129,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,L-glutamate gamma-semialdehyde dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600251.1;locus_tag=LDO50_RS12795;partial=true;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_224019756.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 3818 6079 . - . ID=gene-LDO50_RS12800;Name=LDO50_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12800;old_locus_tag=BVI1335_200002 NZ_CAJZAO010000113.1 Protein Homology CDS 3818 6079 . - 0 ID=cds-WP_224019757.1;Parent=gene-LDO50_RS12800;Dbxref=GenBank:WP_224019757.1;Name=WP_224019757.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554653.1;locus_tag=LDO50_RS12800;product=primosomal protein N';protein_id=WP_224019757.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 6525 7619 . - . ID=gene-LDO50_RS12805;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=LDO50_RS12805;old_locus_tag=BVI1335_200004 NZ_CAJZAO010000113.1 Protein Homology CDS 6525 7619 . - 0 ID=cds-WP_043290608.1;Parent=gene-LDO50_RS12805;Dbxref=GenBank:WP_043290608.1;Name=WP_043290608.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_043290608.1;locus_tag=LDO50_RS12805;product=uroporphyrinogen decarboxylase;protein_id=WP_043290608.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 7766 8563 . + . ID=gene-LDO50_RS12810;Name=LDO50_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12810;old_locus_tag=BVI1335_200005 NZ_CAJZAO010000113.1 Protein Homology CDS 7766 8563 . + 0 ID=cds-WP_059568052.1;Parent=gene-LDO50_RS12810;Dbxref=GenBank:WP_059568052.1;Name=WP_059568052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655622.1;locus_tag=LDO50_RS12810;product=transporter substrate-binding domain-containing protein;protein_id=WP_059568052.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 9169 10896 . - . ID=gene-LDO50_RS12815;Name=LDO50_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12815;old_locus_tag=BVI1335_200007 NZ_CAJZAO010000113.1 Protein Homology CDS 9169 10896 . - 0 ID=cds-WP_059460838.1;Parent=gene-LDO50_RS12815;Dbxref=GenBank:WP_059460838.1;Name=WP_059460838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895502.1;locus_tag=LDO50_RS12815;product=AMP-binding protein;protein_id=WP_059460838.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 11154 11579 . - . ID=gene-LDO50_RS12820;Name=LDO50_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12820;old_locus_tag=BVI1335_200008 NZ_CAJZAO010000113.1 Protein Homology CDS 11154 11579 . - 0 ID=cds-WP_011882817.1;Parent=gene-LDO50_RS12820;Dbxref=GenBank:WP_011882817.1;Name=WP_011882817.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010107215.1;locus_tag=LDO50_RS12820;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_011882817.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 11740 13134 . - . ID=gene-LDO50_RS12825;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=LDO50_RS12825;old_locus_tag=BVI1335_200009 NZ_CAJZAO010000113.1 Protein Homology CDS 11740 13134 . - 0 ID=cds-WP_011882816.1;Parent=gene-LDO50_RS12825;Dbxref=GenBank:WP_011882816.1;Name=WP_011882816.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180028.1;locus_tag=LDO50_RS12825;product=F0F1 ATP synthase subunit beta;protein_id=WP_011882816.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 13200 14075 . - . ID=gene-LDO50_RS12830;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=LDO50_RS12830;old_locus_tag=BVI1335_200010 NZ_CAJZAO010000113.1 Protein Homology CDS 13200 14075 . - 0 ID=cds-WP_011882815.1;Parent=gene-LDO50_RS12830;Dbxref=GenBank:WP_011882815.1;Name=WP_011882815.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195831.1;locus_tag=LDO50_RS12830;product=F0F1 ATP synthase subunit gamma;protein_id=WP_011882815.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 14145 15686 . - . ID=gene-LDO50_RS12835;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=LDO50_RS12835;old_locus_tag=BVI1335_200011 NZ_CAJZAO010000113.1 Protein Homology CDS 14145 15686 . - 0 ID=cds-WP_011882814.1;Parent=gene-LDO50_RS12835;Dbxref=GenBank:WP_011882814.1;Name=WP_011882814.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524507.1;locus_tag=LDO50_RS12835;product=F0F1 ATP synthase subunit alpha;protein_id=WP_011882814.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 15731 16270 . - . ID=gene-LDO50_RS12840;Name=LDO50_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12840;old_locus_tag=BVI1335_200012 NZ_CAJZAO010000113.1 Protein Homology CDS 15731 16270 . - 0 ID=cds-WP_011882813.1;Parent=gene-LDO50_RS12840;Dbxref=GenBank:WP_011882813.1;Name=WP_011882813.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895498.1;locus_tag=LDO50_RS12840;product=F0F1 ATP synthase subunit delta;protein_id=WP_011882813.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 16273 16743 . - . ID=gene-LDO50_RS12845;Name=LDO50_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12845;old_locus_tag=BVI1335_200013 NZ_CAJZAO010000113.1 Protein Homology CDS 16273 16743 . - 0 ID=cds-WP_011882812.1;Parent=gene-LDO50_RS12845;Dbxref=GenBank:WP_011882812.1;Name=WP_011882812.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017772246.1;locus_tag=LDO50_RS12845;product=F0F1 ATP synthase subunit B;protein_id=WP_011882812.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 16873 17142 . - . ID=gene-LDO50_RS12850;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=LDO50_RS12850;old_locus_tag=BVI1335_200014 NZ_CAJZAO010000113.1 Protein Homology CDS 16873 17142 . - 0 ID=cds-WP_006482730.1;Parent=gene-LDO50_RS12850;Dbxref=GenBank:WP_006482730.1;Name=WP_006482730.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734176.1;locus_tag=LDO50_RS12850;product=F0F1 ATP synthase subunit C;protein_id=WP_006482730.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 17218 18069 . - . ID=gene-LDO50_RS12855;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=LDO50_RS12855;old_locus_tag=BVI1335_200015 NZ_CAJZAO010000113.1 Protein Homology CDS 17218 18069 . - 0 ID=cds-WP_011882811.1;Parent=gene-LDO50_RS12855;Dbxref=GenBank:WP_011882811.1;Name=WP_011882811.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011204192.1;locus_tag=LDO50_RS12855;product=F0F1 ATP synthase subunit A;protein_id=WP_011882811.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 18180 18707 . - . ID=gene-LDO50_RS12860;Name=LDO50_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12860;old_locus_tag=BVI1335_200016 NZ_CAJZAO010000113.1 Protein Homology CDS 18180 18707 . - 0 ID=cds-WP_011882810.1;Parent=gene-LDO50_RS12860;Dbxref=GenBank:WP_011882810.1;Name=WP_011882810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401468.1;locus_tag=LDO50_RS12860;product=ATP synthase subunit I;protein_id=WP_011882810.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 19291 20421 . - . ID=gene-LDO50_RS12865;Name=LDO50_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12865;old_locus_tag=BVI1335_200018 NZ_CAJZAO010000113.1 Protein Homology CDS 19291 20421 . - 0 ID=cds-WP_176044245.1;Parent=gene-LDO50_RS12865;Dbxref=GenBank:WP_176044245.1;Name=WP_176044245.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496314.1;locus_tag=LDO50_RS12865;product=SLC13 family permease;protein_id=WP_176044245.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 20435 21328 . - . ID=gene-LDO50_RS12870;Name=LDO50_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12870;old_locus_tag=BVI1335_200019 NZ_CAJZAO010000113.1 Protein Homology CDS 20435 21328 . - 0 ID=cds-WP_011882807.1;Parent=gene-LDO50_RS12870;Dbxref=GenBank:WP_011882807.1;Name=WP_011882807.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895494.1;locus_tag=LDO50_RS12870;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_011882807.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 21360 22139 . - . ID=gene-LDO50_RS12875;Name=LDO50_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12875;old_locus_tag=BVI1335_200020 NZ_CAJZAO010000113.1 Protein Homology CDS 21360 22139 . - 0 ID=cds-WP_011882806.1;Parent=gene-LDO50_RS12875;Dbxref=GenBank:WP_011882806.1;Name=WP_011882806.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895493.1;locus_tag=LDO50_RS12875;product=ParA family protein;protein_id=WP_011882806.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 22190 22876 . - . ID=gene-LDO50_RS12880;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=LDO50_RS12880;old_locus_tag=BVI1335_200021 NZ_CAJZAO010000113.1 Protein Homology CDS 22190 22876 . - 0 ID=cds-WP_046425470.1;Parent=gene-LDO50_RS12880;Dbxref=GenBank:WP_046425470.1;Name=WP_046425470.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756475.1;locus_tag=LDO50_RS12880;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_046425470.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 22873 24843 . - . ID=gene-LDO50_RS12885;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=LDO50_RS12885;old_locus_tag=BVI1335_200022 NZ_CAJZAO010000113.1 Protein Homology CDS 22873 24843 . - 0 ID=cds-WP_224019758.1;Parent=gene-LDO50_RS12885;Dbxref=GenBank:WP_224019758.1;Name=WP_224019758.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010093113.1;locus_tag=LDO50_RS12885;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_224019758.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 25314 26069 . - . ID=gene-LDO50_RS12890;Name=LDO50_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12890;old_locus_tag=BVI1335_200023 NZ_CAJZAO010000113.1 Protein Homology CDS 25314 26069 . - 0 ID=cds-WP_045578641.1;Parent=gene-LDO50_RS12890;Dbxref=GenBank:WP_045578641.1;Name=WP_045578641.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895489.1;locus_tag=LDO50_RS12890;product=ABC transporter ATP-binding protein;protein_id=WP_045578641.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 26069 27853 . - . ID=gene-LDO50_RS12895;Name=LDO50_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12895;old_locus_tag=BVI1335_200024 NZ_CAJZAO010000113.1 Protein Homology CDS 26069 27853 . - 0 ID=cds-WP_052747061.1;Parent=gene-LDO50_RS12895;Dbxref=GenBank:WP_052747061.1;Name=WP_052747061.1;Ontology_term=GO:0015803,GO:0005524,GO:0015658,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,branched-chain amino acid transmembrane transporter activity|0015658||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655609.1;locus_tag=LDO50_RS12895;product=branched-chain amino acid ABC transporter ATP-binding protein/permease;protein_id=WP_052747061.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 27858 28913 . - . ID=gene-LDO50_RS12900;Name=LDO50_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12900;old_locus_tag=BVI1335_200025 NZ_CAJZAO010000113.1 Protein Homology CDS 27858 28913 . - 0 ID=cds-WP_043290604.1;Parent=gene-LDO50_RS12900;Dbxref=GenBank:WP_043290604.1;Name=WP_043290604.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401477.1;locus_tag=LDO50_RS12900;product=branched-chain amino acid ABC transporter permease;protein_id=WP_043290604.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 29076 30233 . - . ID=gene-LDO50_RS12905;Name=LDO50_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12905;old_locus_tag=BVI1335_200026 NZ_CAJZAO010000113.1 Protein Homology CDS 29076 30233 . - 0 ID=cds-WP_045578642.1;Parent=gene-LDO50_RS12905;Dbxref=GenBank:WP_045578642.1;Name=WP_045578642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762981.1;locus_tag=LDO50_RS12905;product=ABC transporter substrate-binding protein;protein_id=WP_045578642.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 31306 32280 . - . ID=gene-LDO50_RS12910;Name=LDO50_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12910;old_locus_tag=BVI1335_200028 NZ_CAJZAO010000113.1 Protein Homology CDS 31306 32280 . - 0 ID=cds-WP_059454938.1;Parent=gene-LDO50_RS12910;Dbxref=GenBank:WP_059454938.1;Name=WP_059454938.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600354.1;locus_tag=LDO50_RS12910;product=branched-chain amino acid ABC transporter permease;protein_id=WP_059454938.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 32280 33164 . - . ID=gene-LDO50_RS12915;Name=LDO50_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12915;old_locus_tag=BVI1335_200029 NZ_CAJZAO010000113.1 Protein Homology CDS 32280 33164 . - 0 ID=cds-WP_014722163.1;Parent=gene-LDO50_RS12915;Dbxref=GenBank:WP_014722163.1;Name=WP_014722163.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401481.1;locus_tag=LDO50_RS12915;product=branched-chain amino acid ABC transporter permease;protein_id=WP_014722163.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 33292 34491 . - . ID=gene-LDO50_RS12920;Name=LDO50_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12920;old_locus_tag=BVI1335_200030 NZ_CAJZAO010000113.1 Protein Homology CDS 33292 34491 . - 0 ID=cds-WP_014722162.1;Parent=gene-LDO50_RS12920;Dbxref=GenBank:WP_014722162.1;Name=WP_014722162.1;Ontology_term=GO:0055085,GO:0022857,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185183.1;locus_tag=LDO50_RS12920;product=ABC transporter substrate-binding protein;protein_id=WP_014722162.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 34569 35324 . - . ID=gene-LDO50_RS12925;Name=LDO50_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12925;old_locus_tag=BVI1335_200031 NZ_CAJZAO010000113.1 Protein Homology CDS 34569 35324 . - 0 ID=cds-WP_011882796.1;Parent=gene-LDO50_RS12925;Dbxref=GenBank:WP_011882796.1;Name=WP_011882796.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023954.1;locus_tag=LDO50_RS12925;product=ABC transporter ATP-binding protein;protein_id=WP_011882796.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 35321 36100 . - . ID=gene-LDO50_RS12930;Name=LDO50_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12930;old_locus_tag=BVI1335_200032 NZ_CAJZAO010000113.1 Protein Homology CDS 35321 36100 . - 0 ID=cds-WP_011882795.1;Parent=gene-LDO50_RS12930;Dbxref=GenBank:WP_011882795.1;Name=WP_011882795.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008917939.1;locus_tag=LDO50_RS12930;product=ABC transporter ATP-binding protein;protein_id=WP_011882795.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 36568 38253 . - . ID=gene-LDO50_RS12935;Name=LDO50_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12935;old_locus_tag=BVI1335_200033 NZ_CAJZAO010000113.1 Protein Homology CDS 36568 38253 . - 0 ID=cds-WP_011882794.1;Parent=gene-LDO50_RS12935;Dbxref=GenBank:WP_011882794.1;Name=WP_011882794.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751333.1;locus_tag=LDO50_RS12935;product=GMC family oxidoreductase;protein_id=WP_011882794.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 38418 39317 . + . ID=gene-LDO50_RS12940;Name=LDO50_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12940;old_locus_tag=BVI1335_200034 NZ_CAJZAO010000113.1 Protein Homology CDS 38418 39317 . + 0 ID=cds-WP_034192994.1;Parent=gene-LDO50_RS12940;Dbxref=GenBank:WP_034192994.1;Name=WP_034192994.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004556010.1;locus_tag=LDO50_RS12940;product=LysR family transcriptional regulator;protein_id=WP_034192994.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 39405 39938 . + . ID=gene-LDO50_RS12945;Name=LDO50_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12945;old_locus_tag=BVI1335_200035 NZ_CAJZAO010000113.1 Protein Homology CDS 39405 39938 . + 0 ID=cds-WP_014722157.1;Parent=gene-LDO50_RS12945;Dbxref=GenBank:WP_014722157.1;Name=WP_014722157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546816.1;locus_tag=LDO50_RS12945;product=class IV adenylate cyclase;protein_id=WP_014722157.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 40018 40503 . - . ID=gene-LDO50_RS12950;Name=LDO50_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12950;old_locus_tag=BVI1335_200036 NZ_CAJZAO010000113.1 Protein Homology CDS 40018 40503 . - 0 ID=cds-WP_006408082.1;Parent=gene-LDO50_RS12950;Dbxref=GenBank:WP_006408082.1;Name=WP_006408082.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010093131.1;locus_tag=LDO50_RS12950;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_006408082.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 40610 41536 . + . ID=gene-LDO50_RS12955;Name=phhA;gbkey=Gene;gene=phhA;gene_biotype=protein_coding;locus_tag=LDO50_RS12955;old_locus_tag=BVI1335_200037 NZ_CAJZAO010000113.1 Protein Homology CDS 40610 41536 . + 0 ID=cds-WP_081057437.1;Parent=gene-LDO50_RS12955;Dbxref=GenBank:WP_081057437.1;Name=WP_081057437.1;Ontology_term=GO:0006559,GO:0004505;gbkey=CDS;gene=phhA;go_function=phenylalanine 4-monooxygenase activity|0004505||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895476.1;locus_tag=LDO50_RS12955;product=phenylalanine 4-monooxygenase;protein_id=WP_081057437.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 41683 41991 . + . ID=gene-LDO50_RS12960;Name=LDO50_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12960;old_locus_tag=BVI1335_200038 NZ_CAJZAO010000113.1 Protein Homology CDS 41683 41991 . + 0 ID=cds-WP_011882790.1;Parent=gene-LDO50_RS12960;Dbxref=GenBank:WP_011882790.1;Name=WP_011882790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694015.1;locus_tag=LDO50_RS12960;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=WP_011882790.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 42085 42315 . - . ID=gene-LDO50_RS12965;Name=LDO50_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12965;old_locus_tag=BVI1335_200039 NZ_CAJZAO010000113.1 Protein Homology CDS 42085 42315 . - 0 ID=cds-WP_014722154.1;Parent=gene-LDO50_RS12965;Dbxref=GenBank:WP_014722154.1;Name=WP_014722154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401493.1;locus_tag=LDO50_RS12965;product=DUF3717 domain-containing protein;protein_id=WP_014722154.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 42438 43130 . + . ID=gene-LDO50_RS12970;Name=LDO50_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12970;old_locus_tag=BVI1335_200040 NZ_CAJZAO010000113.1 Protein Homology CDS 42438 43130 . + 0 ID=cds-WP_006401494.1;Parent=gene-LDO50_RS12970;Dbxref=GenBank:WP_006401494.1;Name=WP_006401494.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401494.1;locus_tag=LDO50_RS12970;product=response regulator;protein_id=WP_006401494.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 43260 44744 . + . ID=gene-LDO50_RS12975;Name=LDO50_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12975;old_locus_tag=BVI1335_200041 NZ_CAJZAO010000113.1 Protein Homology CDS 43260 44744 . + 0 ID=cds-WP_011882788.1;Parent=gene-LDO50_RS12975;Dbxref=GenBank:WP_011882788.1;Name=WP_011882788.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492237.1;locus_tag=LDO50_RS12975;product=sensor histidine kinase;protein_id=WP_011882788.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 44886 45416 . - . ID=gene-LDO50_RS12980;Name=LDO50_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12980;old_locus_tag=BVI1335_200042 NZ_CAJZAO010000113.1 Protein Homology CDS 44886 45416 . - 0 ID=cds-WP_034192996.1;Parent=gene-LDO50_RS12980;Dbxref=GenBank:WP_034192996.1;Name=WP_034192996.1;Ontology_term=GO:0005515,GO:0008168,GO:1904047;gbkey=CDS;go_function=protein binding|0005515||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362746.1;locus_tag=LDO50_RS12980;product=SET domain-containing protein;protein_id=WP_034192996.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 45600 46712 . - . ID=gene-LDO50_RS12985;Name=LDO50_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12985;old_locus_tag=BVI1335_200044 NZ_CAJZAO010000113.1 Protein Homology CDS 45600 46712 . - 0 ID=cds-WP_224019759.1;Parent=gene-LDO50_RS12985;Dbxref=GenBank:WP_224019759.1;Name=WP_224019759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010093147.1;locus_tag=LDO50_RS12985;product=NADH:flavin oxidoreductase/NADH oxidase;protein_id=WP_224019759.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 46893 47603 . - . ID=gene-LDO50_RS12990;Name=LDO50_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12990;old_locus_tag=BVI1335_200045 NZ_CAJZAO010000113.1 Protein Homology CDS 46893 47603 . - 0 ID=cds-WP_046425546.1;Parent=gene-LDO50_RS12990;Dbxref=GenBank:WP_046425546.1;Name=WP_046425546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601196.1;locus_tag=LDO50_RS12990;product=glutamine amidotransferase;protein_id=WP_046425546.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 47632 48270 . - . ID=gene-LDO50_RS12995;Name=LDO50_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS12995;old_locus_tag=BVI1335_200046 NZ_CAJZAO010000113.1 Protein Homology CDS 47632 48270 . - 0 ID=cds-WP_011882784.1;Parent=gene-LDO50_RS12995;Dbxref=GenBank:WP_011882784.1;Name=WP_011882784.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408074.1;locus_tag=LDO50_RS12995;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_011882784.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 48775 49890 . - . ID=gene-LDO50_RS13000;Name=LDO50_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13000;old_locus_tag=BVI1335_200047 NZ_CAJZAO010000113.1 Protein Homology CDS 48775 49890 . - 0 ID=cds-WP_011882782.1;Parent=gene-LDO50_RS13000;Dbxref=GenBank:WP_011882782.1;Name=WP_011882782.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334758.1;locus_tag=LDO50_RS13000;product=YbdK family carboxylate-amine ligase;protein_id=WP_011882782.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 49905 51119 . - . ID=gene-LDO50_RS13005;Name=LDO50_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13005;old_locus_tag=BVI1335_200048 NZ_CAJZAO010000113.1 Protein Homology CDS 49905 51119 . - 0 ID=cds-WP_011882781.1;Parent=gene-LDO50_RS13005;Dbxref=GenBank:WP_011882781.1;Name=WP_011882781.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327590.1;locus_tag=LDO50_RS13005;product=cation:proton antiporter;protein_id=WP_011882781.1;transl_table=11 NZ_CAJZAO010000113.1 RefSeq gene 51792 52314 . - . ID=gene-LDO50_RS13010;Name=LDO50_RS13010;end_range=52314,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13010;old_locus_tag=BVI1335_200049;partial=true NZ_CAJZAO010000113.1 Protein Homology CDS 51792 52314 . - 1 ID=cds-WP_224019760.1;Parent=gene-LDO50_RS13010;Dbxref=GenBank:WP_224019760.1;Name=WP_224019760.1;Ontology_term=GO:0016491;end_range=52314,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694013.1;locus_tag=LDO50_RS13010;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_224019760.1;transl_table=11 ##sequence-region NZ_CAJZAO010000114.1 1 532 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000114.1 RefSeq region 1 532 . + . ID=NZ_CAJZAO010000114.1:1..532;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_200 NZ_CAJZAO010000114.1 RefSeq gene 1 246 . - . ID=gene-LDO50_RS13015;Name=LDO50_RS13015;end_range=246,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13015;partial=true;start_range=.,1 NZ_CAJZAO010000114.1 Protein Homology CDS 1 246 . - 2 ID=cds-WP_372586093.1;Parent=gene-LDO50_RS13015;Dbxref=GenBank:WP_372586093.1;Name=WP_372586093.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=246,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492556.1;locus_tag=LDO50_RS13015;partial=true;product=transposase;protein_id=WP_372586093.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000114.1 RefSeq pseudogene 257 532 . + . ID=gene-LDO50_RS13020;Name=LDO50_RS13020;end_range=532,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS13020;partial=true;pseudo=true;start_range=.,257 NZ_CAJZAO010000114.1 Protein Homology CDS 257 532 . + 2 ID=cds-LDO50_RS13020;Parent=gene-LDO50_RS13020;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=532,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546517.1;locus_tag=LDO50_RS13020;partial=true;product=IS21 family transposase;pseudo=true;start_range=.,257;transl_table=11 ##sequence-region NZ_CAJZAO010000115.1 1 2206 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000115.1 RefSeq region 1 2206 . + . ID=NZ_CAJZAO010000115.1:1..2206;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_201 NZ_CAJZAO010000115.1 RefSeq gene 1 1263 . + . ID=gene-LDO50_RS13025;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=LDO50_RS13025;old_locus_tag=BVI1335_2010001;partial=true;start_range=.,1 NZ_CAJZAO010000115.1 Protein Homology CDS 1 1263 . + 0 ID=cds-WP_224019761.1;Parent=gene-LDO50_RS13025;Dbxref=GenBank:WP_224019761.1;Name=WP_224019761.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546260.1;locus_tag=LDO50_RS13025;partial=true;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_224019761.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000115.1 RefSeq gene 1352 2206 . + . ID=gene-LDO50_RS13030;Name=LDO50_RS13030;end_range=2206,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13030;partial=true NZ_CAJZAO010000115.1 Protein Homology CDS 1352 2206 . + 0 ID=cds-WP_224019762.1;Parent=gene-LDO50_RS13030;Dbxref=GenBank:WP_224019762.1;Name=WP_224019762.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;end_range=2206,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212677.1;locus_tag=LDO50_RS13030;partial=true;product=PTS transporter subunit EIIC;protein_id=WP_224019762.1;transl_table=11 ##sequence-region NZ_CAJZAO010000116.1 1 34045 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000116.1 RefSeq region 1 34045 . + . ID=NZ_CAJZAO010000116.1:1..34045;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_202 NZ_CAJZAO010000116.1 RefSeq gene 1 1533 . - . ID=gene-LDO50_RS13035;Name=LDO50_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13035;partial=true;start_range=.,1 NZ_CAJZAO010000116.1 Protein Homology CDS 1 1533 . - 0 ID=cds-WP_224019763.1;Parent=gene-LDO50_RS13035;Dbxref=GenBank:WP_224019763.1;Name=WP_224019763.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397154.1;locus_tag=LDO50_RS13035;partial=true;product=methyl-accepting chemotaxis protein;protein_id=WP_224019763.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 1679 2110 . - . ID=gene-LDO50_RS13040;Name=LDO50_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13040;old_locus_tag=BVI1335_2020002 NZ_CAJZAO010000116.1 Protein Homology CDS 1679 2110 . - 0 ID=cds-WP_011882135.1;Parent=gene-LDO50_RS13040;Dbxref=GenBank:WP_011882135.1;Name=WP_011882135.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882135.1;locus_tag=LDO50_RS13040;product=YqaA family protein;protein_id=WP_011882135.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 2642 3310 . - . ID=gene-LDO50_RS13045;Name=LDO50_RS13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13045;old_locus_tag=BVI1335_2020003 NZ_CAJZAO010000116.1 GeneMarkS-2+ CDS 2642 3310 . - 0 ID=cds-WP_224019764.1;Parent=gene-LDO50_RS13045;Dbxref=GenBank:WP_224019764.1;Name=WP_224019764.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS13045;product=DUF4276 family protein;protein_id=WP_224019764.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 3326 4759 . - . ID=gene-LDO50_RS13050;Name=LDO50_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13050;old_locus_tag=BVI1335_2020004 NZ_CAJZAO010000116.1 Protein Homology CDS 3326 4759 . - 0 ID=cds-WP_224019765.1;Parent=gene-LDO50_RS13050;Dbxref=GenBank:WP_224019765.1;Name=WP_224019765.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF024700.6;locus_tag=LDO50_RS13050;product=AAA family ATPase;protein_id=WP_224019765.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 5102 5461 . - . ID=gene-LDO50_RS13055;Name=LDO50_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13055;old_locus_tag=BVI1335_2020007 NZ_CAJZAO010000116.1 GeneMarkS-2+ CDS 5102 5461 . - 0 ID=cds-WP_224019766.1;Parent=gene-LDO50_RS13055;Dbxref=GenBank:WP_224019766.1;Name=WP_224019766.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS13055;product=hypothetical protein;protein_id=WP_224019766.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 5707 6270 . - . ID=gene-LDO50_RS13060;Name=LDO50_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13060;old_locus_tag=BVI1335_2020009 NZ_CAJZAO010000116.1 GeneMarkS-2+ CDS 5707 6270 . - 0 ID=cds-WP_224019767.1;Parent=gene-LDO50_RS13060;Dbxref=GenBank:WP_224019767.1;Name=WP_224019767.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS13060;product=hypothetical protein;protein_id=WP_224019767.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 6520 7167 . - . ID=gene-LDO50_RS13065;Name=LDO50_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13065;old_locus_tag=BVI1335_2020010 NZ_CAJZAO010000116.1 Protein Homology CDS 6520 7167 . - 0 ID=cds-WP_043292216.1;Parent=gene-LDO50_RS13065;Dbxref=GenBank:WP_043292216.1;Name=WP_043292216.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547783.1;locus_tag=LDO50_RS13065;product=LysE family translocator;protein_id=WP_043292216.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 7449 7931 . + . ID=gene-LDO50_RS13070;Name=LDO50_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13070;old_locus_tag=BVI1335_2020011 NZ_CAJZAO010000116.1 Protein Homology CDS 7449 7931 . + 0 ID=cds-WP_011882138.1;Parent=gene-LDO50_RS13070;Dbxref=GenBank:WP_011882138.1;Name=WP_011882138.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010098798.1;locus_tag=LDO50_RS13070;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011882138.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 8618 10261 . - . ID=gene-LDO50_RS13075;Name=LDO50_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13075;old_locus_tag=BVI1335_2020015 NZ_CAJZAO010000116.1 Protein Homology CDS 8618 10261 . - 0 ID=cds-WP_224019768.1;Parent=gene-LDO50_RS13075;Dbxref=GenBank:WP_224019768.1;Name=WP_224019768.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882139.1;locus_tag=LDO50_RS13075;product=IclR family transcriptional regulator;protein_id=WP_224019768.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 10439 11398 . + . ID=gene-LDO50_RS13080;Name=LDO50_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13080;old_locus_tag=BVI1335_2020016 NZ_CAJZAO010000116.1 Protein Homology CDS 10439 11398 . + 0 ID=cds-WP_034193512.1;Parent=gene-LDO50_RS13080;Dbxref=GenBank:WP_034193512.1;Name=WP_034193512.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018422163.1;locus_tag=LDO50_RS13080;product=MBL fold metallo-hydrolase;protein_id=WP_034193512.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 11556 12929 . + . ID=gene-LDO50_RS13085;Name=LDO50_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13085;old_locus_tag=BVI1335_2020017 NZ_CAJZAO010000116.1 Protein Homology CDS 11556 12929 . + 0 ID=cds-WP_126220838.1;Parent=gene-LDO50_RS13085;Dbxref=GenBank:WP_126220838.1;Name=WP_126220838.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762187.1;locus_tag=LDO50_RS13085;product=MFS transporter;protein_id=WP_126220838.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 12952 13752 . - . ID=gene-LDO50_RS13090;Name=LDO50_RS13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13090;old_locus_tag=BVI1335_2020018 NZ_CAJZAO010000116.1 Protein Homology CDS 12952 13752 . - 0 ID=cds-WP_034193514.1;Parent=gene-LDO50_RS13090;Dbxref=GenBank:WP_034193514.1;Name=WP_034193514.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762186.1;locus_tag=LDO50_RS13090;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_034193514.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 13897 14859 . + . ID=gene-LDO50_RS13095;Name=LDO50_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13095;old_locus_tag=BVI1335_2020020 NZ_CAJZAO010000116.1 Protein Homology CDS 13897 14859 . + 0 ID=cds-WP_224019769.1;Parent=gene-LDO50_RS13095;Dbxref=GenBank:WP_224019769.1;Name=WP_224019769.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765860.1;locus_tag=LDO50_RS13095;product=GlxA family transcriptional regulator;protein_id=WP_224019769.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 14934 16082 . + . ID=gene-LDO50_RS13100;Name=LDO50_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13100;old_locus_tag=BVI1335_2020019 NZ_CAJZAO010000116.1 Protein Homology CDS 14934 16082 . + 0 ID=cds-WP_176300036.1;Parent=gene-LDO50_RS13100;Dbxref=GenBank:WP_176300036.1;Name=WP_176300036.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479109.1;locus_tag=LDO50_RS13100;product=epoxide hydrolase family protein;protein_id=WP_176300036.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 16170 16661 . - . ID=gene-LDO50_RS13105;Name=LDO50_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13105;old_locus_tag=BVI1335_2020021 NZ_CAJZAO010000116.1 Protein Homology CDS 16170 16661 . - 0 ID=cds-WP_011882145.1;Parent=gene-LDO50_RS13105;Dbxref=GenBank:WP_011882145.1;Name=WP_011882145.1;Ontology_term=GO:0016702,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of two atoms of oxygen|0016702||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547776.1;locus_tag=LDO50_RS13105;product=2%2C4'-dihydroxyacetophenone dioxygenase family protein;protein_id=WP_011882145.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 16840 17808 . - . ID=gene-LDO50_RS13110;Name=LDO50_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13110;old_locus_tag=BVI1335_2020022 NZ_CAJZAO010000116.1 Protein Homology CDS 16840 17808 . - 0 ID=cds-WP_011882146.1;Parent=gene-LDO50_RS13110;Dbxref=GenBank:WP_011882146.1;Name=WP_011882146.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882146.1;locus_tag=LDO50_RS13110;product=LysR family transcriptional regulator;protein_id=WP_011882146.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 17914 19272 . + . ID=gene-LDO50_RS13115;Name=LDO50_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13115;old_locus_tag=BVI1335_2020023 NZ_CAJZAO010000116.1 Protein Homology CDS 17914 19272 . + 0 ID=cds-WP_011882147.1;Parent=gene-LDO50_RS13115;Dbxref=GenBank:WP_011882147.1;Name=WP_011882147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329565.1;locus_tag=LDO50_RS13115;product=aspartate aminotransferase family protein;protein_id=WP_011882147.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 19347 20864 . + . ID=gene-LDO50_RS13120;Name=LDO50_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13120;old_locus_tag=BVI1335_2020024 NZ_CAJZAO010000116.1 Protein Homology CDS 19347 20864 . + 0 ID=cds-WP_034193517.1;Parent=gene-LDO50_RS13120;Dbxref=GenBank:WP_034193517.1;Name=WP_034193517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366001.1;locus_tag=LDO50_RS13120;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_034193517.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 21000 21374 . - . ID=gene-LDO50_RS13125;Name=LDO50_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13125;old_locus_tag=BVI1335_2020025 NZ_CAJZAO010000116.1 Protein Homology CDS 21000 21374 . - 0 ID=cds-WP_034193518.1;Parent=gene-LDO50_RS13125;Dbxref=GenBank:WP_034193518.1;Name=WP_034193518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479101.1;locus_tag=LDO50_RS13125;product=COG4315 family predicted lipoprotein;protein_id=WP_034193518.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 21969 22895 . - . ID=gene-LDO50_RS13130;Name=LDO50_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13130;old_locus_tag=BVI1335_2020026 NZ_CAJZAO010000116.1 Protein Homology CDS 21969 22895 . - 0 ID=cds-WP_011882150.1;Parent=gene-LDO50_RS13130;Dbxref=GenBank:WP_011882150.1;Name=WP_011882150.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724938.1;locus_tag=LDO50_RS13130;product=AEC family transporter;protein_id=WP_011882150.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 23039 23923 . - . ID=gene-LDO50_RS13135;Name=LDO50_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13135;old_locus_tag=BVI1335_2020027 NZ_CAJZAO010000116.1 Protein Homology CDS 23039 23923 . - 0 ID=cds-WP_011882151.1;Parent=gene-LDO50_RS13135;Dbxref=GenBank:WP_011882151.1;Name=WP_011882151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329558.1;locus_tag=LDO50_RS13135;product=LysR substrate-binding domain-containing protein;protein_id=WP_011882151.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 24164 24541 . + . ID=gene-LDO50_RS13140;Name=LDO50_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13140;old_locus_tag=BVI1335_2020028 NZ_CAJZAO010000116.1 Protein Homology CDS 24164 24541 . + 0 ID=cds-WP_011882152.1;Parent=gene-LDO50_RS13140;Dbxref=GenBank:WP_011882152.1;Name=WP_011882152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482852.1;locus_tag=LDO50_RS13140;product=nuclear transport factor 2 family protein;protein_id=WP_011882152.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 24761 24973 . - . ID=gene-LDO50_RS13145;Name=LDO50_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13145 NZ_CAJZAO010000116.1 Protein Homology CDS 24761 24973 . - 0 ID=cds-WP_011882153.1;Parent=gene-LDO50_RS13145;Dbxref=GenBank:WP_011882153.1;Name=WP_011882153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754376.1;locus_tag=LDO50_RS13145;product=hypothetical protein;protein_id=WP_011882153.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 25141 27324 . - . ID=gene-LDO50_RS13150;Name=LDO50_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13150;old_locus_tag=BVI1335_2020030 NZ_CAJZAO010000116.1 Protein Homology CDS 25141 27324 . - 0 ID=cds-WP_011882154.1;Parent=gene-LDO50_RS13150;Dbxref=GenBank:WP_011882154.1;Name=WP_011882154.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882154.1;locus_tag=LDO50_RS13150;product=FUSC family protein;protein_id=WP_011882154.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 27515 28468 . + . ID=gene-LDO50_RS13155;Name=LDO50_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13155;old_locus_tag=BVI1335_2020031 NZ_CAJZAO010000116.1 Protein Homology CDS 27515 28468 . + 0 ID=cds-WP_224019770.1;Parent=gene-LDO50_RS13155;Dbxref=GenBank:WP_224019770.1;Name=WP_224019770.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658752.1;locus_tag=LDO50_RS13155;product=LysR family transcriptional regulator;protein_id=WP_224019770.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 28608 28910 . - . ID=gene-LDO50_RS13160;Name=LDO50_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13160;old_locus_tag=BVI1335_2020032 NZ_CAJZAO010000116.1 Protein Homology CDS 28608 28910 . - 0 ID=cds-WP_041494140.1;Parent=gene-LDO50_RS13160;Dbxref=GenBank:WP_041494140.1;Name=WP_041494140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755817.1;locus_tag=LDO50_RS13160;product=DUF4148 domain-containing protein;protein_id=WP_041494140.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 29160 30302 . - . ID=gene-LDO50_RS13165;Name=LDO50_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13165;old_locus_tag=BVI1335_2020034 NZ_CAJZAO010000116.1 Protein Homology CDS 29160 30302 . - 0 ID=cds-WP_011882157.1;Parent=gene-LDO50_RS13165;Dbxref=GenBank:WP_011882157.1;Name=WP_011882157.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338211.1;locus_tag=LDO50_RS13165;product=porin;protein_id=WP_011882157.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 30612 31076 . + . ID=gene-LDO50_RS13170;Name=LDO50_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13170;old_locus_tag=BVI1335_2020035 NZ_CAJZAO010000116.1 Protein Homology CDS 30612 31076 . + 0 ID=cds-WP_224019771.1;Parent=gene-LDO50_RS13170;Dbxref=GenBank:WP_224019771.1;Name=WP_224019771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724932.1;locus_tag=LDO50_RS13170;product=VOC family protein;protein_id=WP_224019771.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 31147 32388 . + . ID=gene-LDO50_RS13175;Name=codA;gbkey=Gene;gene=codA;gene_biotype=protein_coding;locus_tag=LDO50_RS13175;old_locus_tag=BVI1335_2020036 NZ_CAJZAO010000116.1 Protein Homology CDS 31147 32388 . + 0 ID=cds-WP_059604585.1;Parent=gene-LDO50_RS13175;Dbxref=GenBank:WP_059604585.1;Name=WP_059604585.1;Ontology_term=GO:0016810;gbkey=CDS;gene=codA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882159.1;locus_tag=LDO50_RS13175;product=cytosine deaminase;protein_id=WP_059604585.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 32560 33887 . + . ID=gene-LDO50_RS13180;Name=LDO50_RS13180;end_range=33887,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13180;old_locus_tag=BVI1335_2020037;partial=true NZ_CAJZAO010000116.1 Protein Homology CDS 32560 33887 . + 0 ID=cds-WP_372586094.1;Parent=gene-LDO50_RS13180;Dbxref=GenBank:WP_372586094.1;Name=WP_372586094.1;end_range=33887,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217021.1;locus_tag=LDO50_RS13180;partial=true;product=chloride channel protein;protein_id=WP_372586094.1;transl_table=11 NZ_CAJZAO010000116.1 RefSeq gene 33898 34045 . + . ID=gene-LDO50_RS13185;Name=LDO50_RS13185;end_range=34045,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13185;partial=true;start_range=.,33898 NZ_CAJZAO010000116.1 Protein Homology CDS 33898 34045 . + 2 ID=cds-WP_372586095.1;Parent=gene-LDO50_RS13185;Dbxref=GenBank:WP_372586095.1;Name=WP_372586095.1;end_range=34045,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415238.1;locus_tag=LDO50_RS13185;partial=true;product=methyltransferase domain-containing protein;protein_id=WP_372586095.1;start_range=.,33898;transl_table=11 ##sequence-region NZ_CAJZAO010000117.1 1 19423 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000117.1 RefSeq region 1 19423 . + . ID=NZ_CAJZAO010000117.1:1..19423;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_203 NZ_CAJZAO010000117.1 RefSeq gene 109 2847 . + . ID=gene-LDO50_RS13190;Name=LDO50_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13190;old_locus_tag=BVI1335_2030001 NZ_CAJZAO010000117.1 Protein Homology CDS 109 2847 . + 0 ID=cds-WP_059567533.1;Parent=gene-LDO50_RS13190;Dbxref=GenBank:WP_059567533.1;Name=WP_059567533.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881384.1;locus_tag=LDO50_RS13190;product=Hsp70 family protein;protein_id=WP_059567533.1;transl_table=11 NZ_CAJZAO010000117.1 RefSeq gene 2902 3498 . - . ID=gene-LDO50_RS13195;Name=LDO50_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13195;old_locus_tag=BVI1335_2030002 NZ_CAJZAO010000117.1 Protein Homology CDS 2902 3498 . - 0 ID=cds-WP_034194900.1;Parent=gene-LDO50_RS13195;Dbxref=GenBank:WP_034194900.1;Name=WP_034194900.1;Note=This protein belongs to a clade of uncharacterized proteins related to peroxidases such as the alkylhydroperoxidase AhpD.;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724477.1;locus_tag=LDO50_RS13195;product=peroxidase-related enzyme;protein_id=WP_034194900.1;transl_table=11 NZ_CAJZAO010000117.1 RefSeq gene 3495 4025 . - . ID=gene-LDO50_RS13200;Name=LDO50_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13200;old_locus_tag=BVI1335_2030003 NZ_CAJZAO010000117.1 Protein Homology CDS 3495 4025 . - 0 ID=cds-WP_011881386.1;Parent=gene-LDO50_RS13200;Dbxref=GenBank:WP_011881386.1;Name=WP_011881386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881386.1;locus_tag=LDO50_RS13200;product=CMD domain-containing protein;protein_id=WP_011881386.1;transl_table=11 NZ_CAJZAO010000117.1 RefSeq gene 4018 5502 . - . ID=gene-LDO50_RS13205;Name=LDO50_RS13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13205;old_locus_tag=BVI1335_2030004 NZ_CAJZAO010000117.1 Protein Homology CDS 4018 5502 . - 0 ID=cds-WP_224019772.1;Parent=gene-LDO50_RS13205;Dbxref=GenBank:WP_224019772.1;Name=WP_224019772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881387.1;locus_tag=LDO50_RS13205;product=NAD(P)-binding domain-containing protein;protein_id=WP_224019772.1;transl_table=11 NZ_CAJZAO010000117.1 RefSeq gene 5499 6539 . - . ID=gene-LDO50_RS13210;Name=LDO50_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13210;old_locus_tag=BVI1335_2030005 NZ_CAJZAO010000117.1 Protein Homology CDS 5499 6539 . - 0 ID=cds-WP_034194901.1;Parent=gene-LDO50_RS13210;Dbxref=GenBank:WP_034194901.1;Name=WP_034194901.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495671.1;locus_tag=LDO50_RS13210;product=LysR family transcriptional regulator;protein_id=WP_034194901.1;transl_table=11 NZ_CAJZAO010000117.1 RefSeq gene 6895 8088 . + . ID=gene-LDO50_RS13215;Name=LDO50_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13215;old_locus_tag=BVI1335_2030006 NZ_CAJZAO010000117.1 Protein Homology CDS 6895 8088 . + 0 ID=cds-WP_011881389.1;Parent=gene-LDO50_RS13215;Dbxref=GenBank:WP_011881389.1;Name=WP_011881389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416569.1;locus_tag=LDO50_RS13215;product=ABC transporter substrate-binding protein;protein_id=WP_011881389.1;transl_table=11 NZ_CAJZAO010000117.1 RefSeq gene 8134 9945 . + . ID=gene-LDO50_RS13220;Name=LDO50_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13220;old_locus_tag=BVI1335_2030007 NZ_CAJZAO010000117.1 Protein Homology CDS 8134 9945 . + 0 ID=cds-WP_059668418.1;Parent=gene-LDO50_RS13220;Dbxref=GenBank:WP_059668418.1;Name=WP_059668418.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356127.1;locus_tag=LDO50_RS13220;product=ABC transporter permease;protein_id=WP_059668418.1;transl_table=11 NZ_CAJZAO010000117.1 RefSeq gene 9957 10796 . + . ID=gene-LDO50_RS13225;Name=LDO50_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13225;old_locus_tag=BVI1335_2030008 NZ_CAJZAO010000117.1 Protein Homology CDS 9957 10796 . + 0 ID=cds-WP_014724480.1;Parent=gene-LDO50_RS13225;Dbxref=GenBank:WP_014724480.1;Name=WP_014724480.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724480.1;locus_tag=LDO50_RS13225;product=ABC transporter ATP-binding protein;protein_id=WP_014724480.1;transl_table=11 NZ_CAJZAO010000117.1 RefSeq gene 10826 11557 . + . ID=gene-LDO50_RS13230;Name=LDO50_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13230;old_locus_tag=BVI1335_2030009 NZ_CAJZAO010000117.1 Protein Homology CDS 10826 11557 . + 0 ID=cds-WP_224019773.1;Parent=gene-LDO50_RS13230;Dbxref=GenBank:WP_224019773.1;Name=WP_224019773.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881392.1;locus_tag=LDO50_RS13230;product=ABC transporter ATP-binding protein;protein_id=WP_224019773.1;transl_table=11 NZ_CAJZAO010000117.1 RefSeq gene 11579 12997 . - . ID=gene-LDO50_RS13235;Name=LDO50_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13235;old_locus_tag=BVI1335_2030010 NZ_CAJZAO010000117.1 Protein Homology CDS 11579 12997 . - 0 ID=cds-WP_011881393.1;Parent=gene-LDO50_RS13235;Dbxref=GenBank:WP_011881393.1;Name=WP_011881393.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881393.1;locus_tag=LDO50_RS13235;product=sensor histidine kinase;protein_id=WP_011881393.1;transl_table=11 NZ_CAJZAO010000117.1 RefSeq gene 12984 13649 . - . ID=gene-LDO50_RS13240;Name=LDO50_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13240;old_locus_tag=BVI1335_2030011 NZ_CAJZAO010000117.1 Protein Homology CDS 12984 13649 . - 0 ID=cds-WP_011881394.1;Parent=gene-LDO50_RS13240;Dbxref=GenBank:WP_011881394.1;Name=WP_011881394.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338672.1;locus_tag=LDO50_RS13240;product=response regulator transcription factor;protein_id=WP_011881394.1;transl_table=11 NZ_CAJZAO010000117.1 RefSeq gene 13884 14912 . + . ID=gene-LDO50_RS13245;Name=LDO50_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13245;old_locus_tag=BVI1335_2030013 NZ_CAJZAO010000117.1 Protein Homology CDS 13884 14912 . + 0 ID=cds-WP_059696506.1;Parent=gene-LDO50_RS13245;Dbxref=GenBank:WP_059696506.1;Name=WP_059696506.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404369.1;locus_tag=LDO50_RS13245;product=ABC transporter substrate-binding protein;protein_id=WP_059696506.1;transl_table=11 NZ_CAJZAO010000117.1 RefSeq gene 15002 16312 . + . ID=gene-LDO50_RS13250;Name=LDO50_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13250;old_locus_tag=BVI1335_2030014 NZ_CAJZAO010000117.1 Protein Homology CDS 15002 16312 . + 0 ID=cds-WP_014724483.1;Parent=gene-LDO50_RS13250;Dbxref=GenBank:WP_014724483.1;Name=WP_014724483.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338670.1;locus_tag=LDO50_RS13250;product=MFS transporter;protein_id=WP_014724483.1;transl_table=11 NZ_CAJZAO010000117.1 RefSeq gene 16350 18149 . - . ID=gene-LDO50_RS13255;Name=LDO50_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13255;old_locus_tag=BVI1335_2030015 NZ_CAJZAO010000117.1 Protein Homology CDS 16350 18149 . - 0 ID=cds-WP_059567529.1;Parent=gene-LDO50_RS13255;Dbxref=GenBank:WP_059567529.1;Name=WP_059567529.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724484.1;locus_tag=LDO50_RS13255;product=sensor histidine kinase;protein_id=WP_059567529.1;transl_table=11 NZ_CAJZAO010000117.1 RefSeq gene 18146 18793 . - . ID=gene-LDO50_RS13260;Name=LDO50_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13260;old_locus_tag=BVI1335_2030016 NZ_CAJZAO010000117.1 Protein Homology CDS 18146 18793 . - 0 ID=cds-WP_175999680.1;Parent=gene-LDO50_RS13260;Dbxref=GenBank:WP_175999680.1;Name=WP_175999680.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694631.1;locus_tag=LDO50_RS13260;product=response regulator;protein_id=WP_175999680.1;transl_table=11 NZ_CAJZAO010000117.1 RefSeq pseudogene 19225 19423 . + . ID=gene-LDO50_RS31495;Name=LDO50_RS31495;end_range=19423,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31495;partial=true;pseudo=true;start_range=.,19225 NZ_CAJZAO010000117.1 Protein Homology CDS 19225 19423 . + 1 ID=cds-LDO50_RS31495;Parent=gene-LDO50_RS31495;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=19423,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755806.1;locus_tag=LDO50_RS31495;partial=true;product=hypothetical protein;pseudo=true;start_range=.,19225;transl_table=11 ##sequence-region NZ_CAJZAO010000118.1 1 15315 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000118.1 RefSeq region 1 15315 . + . ID=NZ_CAJZAO010000118.1:1..15315;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_204 NZ_CAJZAO010000118.1 RefSeq pseudogene 1 194 . - . ID=gene-LDO50_RS13270;Name=flhF;gbkey=Gene;gene=flhF;gene_biotype=pseudogene;locus_tag=LDO50_RS13270;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000118.1 Protein Homology CDS 1 194 . - 0 ID=cds-LDO50_RS13270;Parent=gene-LDO50_RS13270;Note=positive regulator of class III flagellar genes%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=flhF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882919.1;locus_tag=LDO50_RS13270;partial=true;product=flagellar biosynthesis protein FlhF;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000118.1 RefSeq gene 191 2293 . - . ID=gene-LDO50_RS13275;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=LDO50_RS13275;old_locus_tag=BVI1335_2040002 NZ_CAJZAO010000118.1 Protein Homology CDS 191 2293 . - 0 ID=cds-WP_224019774.1;Parent=gene-LDO50_RS13275;Dbxref=GenBank:WP_224019774.1;Name=WP_224019774.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602362.1;locus_tag=LDO50_RS13275;product=flagellar biosynthesis protein FlhA;protein_id=WP_224019774.1;transl_table=11 NZ_CAJZAO010000118.1 RefSeq gene 2290 3489 . - . ID=gene-LDO50_RS13280;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=LDO50_RS13280;old_locus_tag=BVI1335_2040003 NZ_CAJZAO010000118.1 Protein Homology CDS 2290 3489 . - 0 ID=cds-WP_011882917.1;Parent=gene-LDO50_RS13280;Dbxref=GenBank:WP_011882917.1;Name=WP_011882917.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761747.1;locus_tag=LDO50_RS13280;product=flagellar biosynthesis protein FlhB;protein_id=WP_011882917.1;transl_table=11 NZ_CAJZAO010000118.1 RefSeq gene 3924 4304 . - . ID=gene-LDO50_RS13285;Name=LDO50_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13285;old_locus_tag=BVI1335_2040004 NZ_CAJZAO010000118.1 Protein Homology CDS 3924 4304 . - 0 ID=cds-WP_011882916.1;Parent=gene-LDO50_RS13285;Dbxref=GenBank:WP_011882916.1;Name=WP_011882916.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655691.1;locus_tag=LDO50_RS13285;product=DUF805 domain-containing protein;protein_id=WP_011882916.1;transl_table=11 NZ_CAJZAO010000118.1 RefSeq gene 4654 5151 . - . ID=gene-LDO50_RS13290;Name=LDO50_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13290;old_locus_tag=BVI1335_2040005 NZ_CAJZAO010000118.1 Protein Homology CDS 4654 5151 . - 0 ID=cds-WP_034192936.1;Parent=gene-LDO50_RS13290;Dbxref=GenBank:WP_034192936.1;Name=WP_034192936.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198641.1;locus_tag=LDO50_RS13290;product=VOC family protein;protein_id=WP_034192936.1;transl_table=11 NZ_CAJZAO010000118.1 RefSeq gene 5315 6586 . - . ID=gene-LDO50_RS13295;Name=LDO50_RS13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13295;old_locus_tag=BVI1335_2040007 NZ_CAJZAO010000118.1 Protein Homology CDS 5315 6586 . - 0 ID=cds-WP_034192937.1;Parent=gene-LDO50_RS13295;Dbxref=GenBank:WP_034192937.1;Name=WP_034192937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212518.1;locus_tag=LDO50_RS13295;product=DUF3443 domain-containing protein;protein_id=WP_034192937.1;transl_table=11 NZ_CAJZAO010000118.1 RefSeq gene 6603 7109 . - . ID=gene-LDO50_RS13300;Name=LDO50_RS13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13300;old_locus_tag=BVI1335_2040008 NZ_CAJZAO010000118.1 Protein Homology CDS 6603 7109 . - 0 ID=cds-WP_011882913.1;Parent=gene-LDO50_RS13300;Dbxref=GenBank:WP_011882913.1;Name=WP_011882913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546708.1;locus_tag=LDO50_RS13300;product=DUF2844 domain-containing protein;protein_id=WP_011882913.1;transl_table=11 NZ_CAJZAO010000118.1 RefSeq gene 7402 8133 . - . ID=gene-LDO50_RS13305;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=LDO50_RS13305;old_locus_tag=BVI1335_2040009 NZ_CAJZAO010000118.1 Protein Homology CDS 7402 8133 . - 0 ID=cds-WP_011882912.1;Parent=gene-LDO50_RS13305;Dbxref=GenBank:WP_011882912.1;Name=WP_011882912.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350602.1;locus_tag=LDO50_RS13305;product=protein phosphatase CheZ;protein_id=WP_011882912.1;transl_table=11 NZ_CAJZAO010000118.1 RefSeq gene 8135 8530 . - . ID=gene-LDO50_RS13310;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=LDO50_RS13310;old_locus_tag=BVI1335_2040010 NZ_CAJZAO010000118.1 Protein Homology CDS 8135 8530 . - 0 ID=cds-WP_006754880.1;Parent=gene-LDO50_RS13310;Dbxref=GenBank:WP_006754880.1;Name=WP_006754880.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754880.1;locus_tag=LDO50_RS13310;product=chemotaxis response regulator CheY;protein_id=WP_006754880.1;transl_table=11 NZ_CAJZAO010000118.1 RefSeq gene 8598 9689 . - . ID=gene-LDO50_RS13315;Name=LDO50_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13315;old_locus_tag=BVI1335_2040011 NZ_CAJZAO010000118.1 Protein Homology CDS 8598 9689 . - 0 ID=cds-WP_011882911.1;Parent=gene-LDO50_RS13315;Dbxref=GenBank:WP_011882911.1;Name=WP_011882911.1;Ontology_term=GO:0006482,GO:0006935,GO:0018277,GO:0000156,GO:0008984,GO:0050568,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphorelay response regulator activity|0000156||IEA,protein-glutamate methylesterase activity|0008984||IEA,protein-glutamine glutaminase activity|0050568||IEA;go_process=protein demethylation|0006482||IEA,chemotaxis|0006935||IEA,protein deamination|0018277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895566.1;locus_tag=LDO50_RS13315;product=protein-glutamate methylesterase/protein-glutamine glutaminase;protein_id=WP_011882911.1;transl_table=11 NZ_CAJZAO010000118.1 RefSeq gene 9695 10435 . - . ID=gene-LDO50_RS13320;Name=cheD;gbkey=Gene;gene=cheD;gene_biotype=protein_coding;locus_tag=LDO50_RS13320;old_locus_tag=BVI1335_2040012 NZ_CAJZAO010000118.1 Protein Homology CDS 9695 10435 . - 0 ID=cds-WP_011882910.1;Parent=gene-LDO50_RS13320;Dbxref=GenBank:WP_011882910.1;Name=WP_011882910.1;gbkey=CDS;gene=cheD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882910.1;locus_tag=LDO50_RS13320;product=chemoreceptor glutamine deamidase CheD;protein_id=WP_011882910.1;transl_table=11 NZ_CAJZAO010000118.1 RefSeq gene 10435 11415 . - . ID=gene-LDO50_RS13325;Name=LDO50_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13325;old_locus_tag=BVI1335_2040013 NZ_CAJZAO010000118.1 Protein Homology CDS 10435 11415 . - 0 ID=cds-WP_014722235.1;Parent=gene-LDO50_RS13325;Dbxref=GenBank:WP_014722235.1;Name=WP_014722235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722235.1;locus_tag=LDO50_RS13325;product=CheR family methyltransferase;protein_id=WP_014722235.1;transl_table=11 NZ_CAJZAO010000118.1 RefSeq gene 11419 13380 . - . ID=gene-LDO50_RS13330;Name=LDO50_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13330;old_locus_tag=BVI1335_2040014 NZ_CAJZAO010000118.1 Protein Homology CDS 11419 13380 . - 0 ID=cds-WP_034192940.1;Parent=gene-LDO50_RS13330;Dbxref=GenBank:WP_034192940.1;Name=WP_034192940.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722234.1;locus_tag=LDO50_RS13330;product=methyl-accepting chemotaxis protein;protein_id=WP_034192940.1;transl_table=11 NZ_CAJZAO010000118.1 RefSeq gene 13418 13933 . - . ID=gene-LDO50_RS13335;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=LDO50_RS13335;old_locus_tag=BVI1335_2040015 NZ_CAJZAO010000118.1 Protein Homology CDS 13418 13933 . - 0 ID=cds-WP_011882907.1;Parent=gene-LDO50_RS13335;Dbxref=GenBank:WP_011882907.1;Name=WP_011882907.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401394.1;locus_tag=LDO50_RS13335;product=chemotaxis protein CheW;protein_id=WP_011882907.1;transl_table=11 NZ_CAJZAO010000118.1 RefSeq gene 13982 15315 . - . ID=gene-LDO50_RS13340;Name=LDO50_RS13340;end_range=15315,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13340;old_locus_tag=BVI1335_2040016;partial=true NZ_CAJZAO010000118.1 Protein Homology CDS 13982 15315 . - 2 ID=cds-WP_224019775.1;Parent=gene-LDO50_RS13340;Dbxref=GenBank:WP_224019775.1;Name=WP_224019775.1;Ontology_term=GO:0006935,GO:0007165;end_range=15315,.;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546713.1;locus_tag=LDO50_RS13340;partial=true;product=chemotaxis protein CheW;protein_id=WP_224019775.1;transl_table=11 ##sequence-region NZ_CAJZAO010000119.1 1 1836 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000119.1 RefSeq region 1 1836 . + . ID=NZ_CAJZAO010000119.1:1..1836;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_205 NZ_CAJZAO010000119.1 RefSeq pseudogene 1 234 . + . ID=gene-LDO50_RS31500;Name=LDO50_RS31500;end_range=234,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31500;old_locus_tag=BVI1335_2050001;partial=true;pseudo=true NZ_CAJZAO010000119.1 Protein Homology CDS 1 234 . + 0 ID=cds-LDO50_RS31500;Parent=gene-LDO50_RS31500;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=234,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725394.1;locus_tag=LDO50_RS31500;partial=true;product=type III secretion system cytoplasmic ring protein SctQ;pseudo=true;transl_table=11 NZ_CAJZAO010000119.1 RefSeq gene 245 833 . + . ID=gene-LDO50_RS13345;Name=LDO50_RS13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13345;old_locus_tag=BVI1335_2050002;partial=true;start_range=.,245 NZ_CAJZAO010000119.1 Protein Homology CDS 245 833 . + 1 ID=cds-WP_443797769.1;Parent=gene-LDO50_RS13345;Dbxref=GenBank:WP_443797769.1;Name=WP_443797769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496151.1;locus_tag=LDO50_RS13345;partial=true;product=FliM/FliN family flagellar motor switch protein;protein_id=WP_443797769.1;start_range=.,245;transl_table=11 NZ_CAJZAO010000119.1 RefSeq gene 837 1511 . + . ID=gene-LDO50_RS13350;Name=sctR;gbkey=Gene;gene=sctR;gene_biotype=protein_coding;locus_tag=LDO50_RS13350;old_locus_tag=BVI1335_2050003 NZ_CAJZAO010000119.1 Protein Homology CDS 837 1511 . + 0 ID=cds-WP_011882597.1;Parent=gene-LDO50_RS13350;Dbxref=GenBank:WP_011882597.1;Name=WP_011882597.1;Ontology_term=GO:0015031,GO:0030254,GO:0016020,GO:0030257;gbkey=CDS;gene=sctR;go_component=membrane|0016020||IEA,type III protein secretion system complex|0030257||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415582.1;locus_tag=LDO50_RS13350;product=type III secretion system export apparatus subunit SctR;protein_id=WP_011882597.1;transl_table=11 NZ_CAJZAO010000119.1 RefSeq gene 1508 1836 . + . ID=gene-LDO50_RS13355;Name=LDO50_RS13355;end_range=1836,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13355;partial=true NZ_CAJZAO010000119.1 Protein Homology CDS 1508 1836 . + 0 ID=cds-WP_224019776.1;Parent=gene-LDO50_RS13355;Dbxref=GenBank:WP_224019776.1;Name=WP_224019776.1;end_range=1836,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415585.1;locus_tag=LDO50_RS13355;partial=true;product=transglycosylase SLT domain-containing protein;protein_id=WP_224019776.1;transl_table=11 ##sequence-region NZ_CAJZAO010000120.1 1 12358 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000120.1 RefSeq region 1 12358 . + . ID=NZ_CAJZAO010000120.1:1..12358;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_206 NZ_CAJZAO010000120.1 RefSeq pseudogene 1 145 . + . ID=gene-LDO50_RS31505;Name=LDO50_RS31505;end_range=145,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31505;old_locus_tag=BVI1335_2060001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000120.1 Protein Homology CDS 1 145 . + 0 ID=cds-LDO50_RS31505;Parent=gene-LDO50_RS31505;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=145,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214316.1;locus_tag=LDO50_RS31505;partial=true;product=allophanate hydrolase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000120.1 RefSeq pseudogene 156 356 . + . ID=gene-LDO50_RS31510;Name=LDO50_RS31510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31510;old_locus_tag=BVI1335_2060002;partial=true;pseudo=true;start_range=.,156 NZ_CAJZAO010000120.1 Protein Homology CDS 156 356 . + 0 ID=cds-LDO50_RS31510;Parent=gene-LDO50_RS31510;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886276.1;locus_tag=LDO50_RS31510;partial=true;product=allophanate hydrolase;pseudo=true;start_range=.,156;transl_table=11 NZ_CAJZAO010000120.1 RefSeq gene 412 1176 . + . ID=gene-LDO50_RS13365;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=LDO50_RS13365;old_locus_tag=BVI1335_2060003 NZ_CAJZAO010000120.1 Protein Homology CDS 412 1176 . + 0 ID=cds-WP_059462212.1;Parent=gene-LDO50_RS13365;Dbxref=GenBank:WP_059462212.1;Name=WP_059462212.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886277.1;locus_tag=LDO50_RS13365;product=5-oxoprolinase subunit PxpA;protein_id=WP_059462212.1;transl_table=11 NZ_CAJZAO010000120.1 RefSeq gene 1747 2892 . - . ID=gene-LDO50_RS13370;Name=LDO50_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13370;old_locus_tag=BVI1335_2060004 NZ_CAJZAO010000120.1 Protein Homology CDS 1747 2892 . - 0 ID=cds-WP_011886278.1;Parent=gene-LDO50_RS13370;Dbxref=GenBank:WP_011886278.1;Name=WP_011886278.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895779.1;locus_tag=LDO50_RS13370;product=TraB/GumN family protein;protein_id=WP_011886278.1;transl_table=11 NZ_CAJZAO010000120.1 RefSeq gene 2885 3901 . - . ID=gene-LDO50_RS13375;Name=LDO50_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13375;old_locus_tag=BVI1335_2060005 NZ_CAJZAO010000120.1 Protein Homology CDS 2885 3901 . - 0 ID=cds-WP_011886279.1;Parent=gene-LDO50_RS13375;Dbxref=GenBank:WP_011886279.1;Name=WP_011886279.1;Ontology_term=GO:0015833,GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523051.1;locus_tag=LDO50_RS13375;product=peptide ABC transporter ATP-binding protein;protein_id=WP_011886279.1;transl_table=11 NZ_CAJZAO010000120.1 RefSeq gene 3898 4896 . - . ID=gene-LDO50_RS13380;Name=LDO50_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13380;old_locus_tag=BVI1335_2060006 NZ_CAJZAO010000120.1 Protein Homology CDS 3898 4896 . - 0 ID=cds-WP_011886280.1;Parent=gene-LDO50_RS13380;Dbxref=GenBank:WP_011886280.1;Name=WP_011886280.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477543.1;locus_tag=LDO50_RS13380;product=ABC transporter ATP-binding protein;protein_id=WP_011886280.1;transl_table=11 NZ_CAJZAO010000120.1 RefSeq gene 5029 5946 . - . ID=gene-LDO50_RS13385;Name=LDO50_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13385;old_locus_tag=BVI1335_2060007 NZ_CAJZAO010000120.1 Protein Homology CDS 5029 5946 . - 0 ID=cds-WP_011886281.1;Parent=gene-LDO50_RS13385;Dbxref=GenBank:WP_011886281.1;Name=WP_011886281.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489141.1;locus_tag=LDO50_RS13385;product=ABC transporter permease subunit;protein_id=WP_011886281.1;transl_table=11 NZ_CAJZAO010000120.1 RefSeq gene 5951 6961 . - . ID=gene-LDO50_RS13390;Name=LDO50_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13390;old_locus_tag=BVI1335_2060008 NZ_CAJZAO010000120.1 Protein Homology CDS 5951 6961 . - 0 ID=cds-WP_011886282.1;Parent=gene-LDO50_RS13390;Dbxref=GenBank:WP_011886282.1;Name=WP_011886282.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014192601.1;locus_tag=LDO50_RS13390;product=ABC transporter permease subunit;protein_id=WP_011886282.1;transl_table=11 NZ_CAJZAO010000120.1 RefSeq gene 7081 8709 . - . ID=gene-LDO50_RS13395;Name=LDO50_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13395;old_locus_tag=BVI1335_2060009 NZ_CAJZAO010000120.1 Protein Homology CDS 7081 8709 . - 0 ID=cds-WP_059474620.1;Parent=gene-LDO50_RS13395;Dbxref=GenBank:WP_059474620.1;Name=WP_059474620.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417151.1;locus_tag=LDO50_RS13395;product=ABC transporter substrate-binding protein;protein_id=WP_059474620.1;transl_table=11 NZ_CAJZAO010000120.1 RefSeq gene 9053 10360 . - . ID=gene-LDO50_RS13400;Name=LDO50_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13400;old_locus_tag=BVI1335_2060010 NZ_CAJZAO010000120.1 Protein Homology CDS 9053 10360 . - 0 ID=cds-WP_034192482.1;Parent=gene-LDO50_RS13400;Dbxref=GenBank:WP_034192482.1;Name=WP_034192482.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895773.1;locus_tag=LDO50_RS13400;product=MFS transporter;protein_id=WP_034192482.1;transl_table=11 NZ_CAJZAO010000120.1 RefSeq gene 10555 10866 . - . ID=gene-LDO50_RS13405;Name=LDO50_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13405;old_locus_tag=BVI1335_2060011 NZ_CAJZAO010000120.1 Protein Homology CDS 10555 10866 . - 0 ID=cds-WP_011886285.1;Parent=gene-LDO50_RS13405;Dbxref=GenBank:WP_011886285.1;Name=WP_011886285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895772.1;locus_tag=LDO50_RS13405;product=high-potential iron-sulfur protein;protein_id=WP_011886285.1;transl_table=11 NZ_CAJZAO010000120.1 RefSeq gene 11050 12159 . - . ID=gene-LDO50_RS13410;Name=LDO50_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13410;old_locus_tag=BVI1335_2060012 NZ_CAJZAO010000120.1 Protein Homology CDS 11050 12159 . - 0 ID=cds-WP_059474621.1;Parent=gene-LDO50_RS13410;Dbxref=GenBank:WP_059474621.1;Name=WP_059474621.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886286.1;locus_tag=LDO50_RS13410;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_059474621.1;transl_table=11 ##sequence-region NZ_CAJZAO010000121.1 1 7659 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000121.1 RefSeq region 1 7659 . + . ID=NZ_CAJZAO010000121.1:1..7659;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_207 NZ_CAJZAO010000121.1 RefSeq gene 1 156 . + . ID=gene-LDO50_RS31515;Name=LDO50_RS31515;end_range=156,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31515;old_locus_tag=BVI1335_2070001;partial=true;start_range=.,1 NZ_CAJZAO010000121.1 Protein Homology CDS 1 156 . + 1 ID=cds-WP_443797772.1;Parent=gene-LDO50_RS31515;Dbxref=GenBank:WP_443797772.1;Name=WP_443797772.1;Ontology_term=GO:0005524;end_range=156,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099475.1;locus_tag=LDO50_RS31515;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_443797772.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000121.1 RefSeq gene 167 1073 . + . ID=gene-LDO50_RS13415;Name=LDO50_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13415;old_locus_tag=BVI1335_2070002;partial=true;start_range=.,167 NZ_CAJZAO010000121.1 Protein Homology CDS 167 1073 . + 1 ID=cds-WP_443797770.1;Parent=gene-LDO50_RS13415;Dbxref=GenBank:WP_443797770.1;Name=WP_443797770.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880470.1;locus_tag=LDO50_RS13415;partial=true;product=ABC transporter ATP-binding protein;protein_id=WP_443797770.1;start_range=.,167;transl_table=11 NZ_CAJZAO010000121.1 RefSeq gene 1288 2565 . + . ID=gene-LDO50_RS13420;Name=LDO50_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13420;old_locus_tag=BVI1335_2070003 NZ_CAJZAO010000121.1 Protein Homology CDS 1288 2565 . + 0 ID=cds-WP_443797771.1;Parent=gene-LDO50_RS13420;Dbxref=GenBank:WP_443797771.1;Name=WP_443797771.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372397.1;locus_tag=LDO50_RS13420;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_443797771.1;transl_table=11 NZ_CAJZAO010000121.1 RefSeq gene 2648 3127 . + . ID=gene-LDO50_RS13425;Name=LDO50_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13425;old_locus_tag=BVI1335_2070004 NZ_CAJZAO010000121.1 Protein Homology CDS 2648 3127 . + 0 ID=cds-WP_224019778.1;Parent=gene-LDO50_RS13425;Dbxref=GenBank:WP_224019778.1;Name=WP_224019778.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880468.1;locus_tag=LDO50_RS13425;product=helix-turn-helix domain-containing protein;protein_id=WP_224019778.1;transl_table=11 NZ_CAJZAO010000121.1 RefSeq gene 3360 4094 . + . ID=gene-LDO50_RS13430;Name=LDO50_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13430;old_locus_tag=BVI1335_2070005 NZ_CAJZAO010000121.1 Protein Homology CDS 3360 4094 . + 0 ID=cds-WP_059456689.1;Parent=gene-LDO50_RS13430;Dbxref=GenBank:WP_059456689.1;Name=WP_059456689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758405.1;locus_tag=LDO50_RS13430;product=cupin domain-containing protein;protein_id=WP_059456689.1;transl_table=11 NZ_CAJZAO010000121.1 RefSeq gene 4097 5422 . + . ID=gene-LDO50_RS13435;Name=LDO50_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13435;old_locus_tag=BVI1335_2070006 NZ_CAJZAO010000121.1 Protein Homology CDS 4097 5422 . + 0 ID=cds-WP_046427155.1;Parent=gene-LDO50_RS13435;Dbxref=GenBank:WP_046427155.1;Name=WP_046427155.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661232.1;locus_tag=LDO50_RS13435;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_046427155.1;transl_table=11 NZ_CAJZAO010000121.1 RefSeq gene 5565 6842 . + . ID=gene-LDO50_RS13440;Name=LDO50_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13440;old_locus_tag=BVI1335_2070007 NZ_CAJZAO010000121.1 Protein Homology CDS 5565 6842 . + 0 ID=cds-WP_224019779.1;Parent=gene-LDO50_RS13440;Dbxref=GenBank:WP_224019779.1;Name=WP_224019779.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012427751.1;locus_tag=LDO50_RS13440;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_224019779.1;transl_table=11 NZ_CAJZAO010000121.1 RefSeq gene 6839 7659 . + . ID=gene-LDO50_RS13445;Name=LDO50_RS13445;end_range=7659,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13445;partial=true NZ_CAJZAO010000121.1 Protein Homology CDS 6839 7659 . + 0 ID=cds-WP_224019780.1;Parent=gene-LDO50_RS13445;Dbxref=GenBank:WP_224019780.1;Name=WP_224019780.1;Ontology_term=GO:0016491;end_range=7659,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661234.1;locus_tag=LDO50_RS13445;partial=true;product=aldehyde dehydrogenase family protein;protein_id=WP_224019780.1;transl_table=11 ##sequence-region NZ_CAJZAO010000122.1 1 1159 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000122.1 RefSeq region 1 1159 . + . ID=NZ_CAJZAO010000122.1:1..1159;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_208 NZ_CAJZAO010000122.1 RefSeq gene 1 164 . + . ID=gene-LDO50_RS31520;Name=LDO50_RS31520;end_range=164,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31520;old_locus_tag=BVI1335_2080001;partial=true;start_range=.,1 NZ_CAJZAO010000122.1 Protein Homology CDS 1 164 . + 0 ID=cds-WP_443797773.1;Parent=gene-LDO50_RS31520;Dbxref=GenBank:WP_443797773.1;Name=WP_443797773.1;end_range=164,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009977600.1;locus_tag=LDO50_RS31520;partial=true;product=Mu transposase domain-containing protein;protein_id=WP_443797773.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000122.1 RefSeq gene 290 1087 . + . ID=gene-LDO50_RS13455;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=LDO50_RS13455;old_locus_tag=BVI1335_2080002 NZ_CAJZAO010000122.1 Protein Homology CDS 290 1087 . + 0 ID=cds-WP_011875575.1;Parent=gene-LDO50_RS13455;Dbxref=GenBank:WP_011875575.1;Name=WP_011875575.1;Ontology_term=GO:0005524;gbkey=CDS;gene=istB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700154.1;locus_tag=LDO50_RS13455;product=IS21-like element helper ATPase IstB;protein_id=WP_011875575.1;transl_table=11 ##sequence-region NZ_CAJZAO010000123.1 1 4496 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000123.1 RefSeq region 1 4496 . + . ID=NZ_CAJZAO010000123.1:1..4496;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_209 NZ_CAJZAO010000123.1 RefSeq gene 125 1351 . + . ID=gene-LDO50_RS13465;Name=LDO50_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13465;old_locus_tag=BVI1335_2090001 NZ_CAJZAO010000123.1 Protein Homology CDS 125 1351 . + 0 ID=cds-WP_224019781.1;Parent=gene-LDO50_RS13465;Dbxref=GenBank:WP_224019781.1;Name=WP_224019781.1;Ontology_term=GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694424.1;locus_tag=LDO50_RS13465;product=patatin-like phospholipase family protein;protein_id=WP_224019781.1;transl_table=11 NZ_CAJZAO010000123.1 RefSeq gene 1918 2796 . + . ID=gene-LDO50_RS13470;Name=LDO50_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13470;old_locus_tag=BVI1335_2090003 NZ_CAJZAO010000123.1 Protein Homology CDS 1918 2796 . + 0 ID=cds-WP_011886157.1;Parent=gene-LDO50_RS13470;Dbxref=GenBank:WP_011886157.1;Name=WP_011886157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334373.1;locus_tag=LDO50_RS13470;product=ferritin;protein_id=WP_011886157.1;transl_table=11 NZ_CAJZAO010000123.1 RefSeq gene 2956 3441 . + . ID=gene-LDO50_RS13475;Name=rfaE2;gbkey=Gene;gene=rfaE2;gene_biotype=protein_coding;locus_tag=LDO50_RS13475;old_locus_tag=BVI1335_2090004 NZ_CAJZAO010000123.1 Protein Homology CDS 2956 3441 . + 0 ID=cds-WP_224019782.1;Parent=gene-LDO50_RS13475;Dbxref=GenBank:WP_224019782.1;Name=WP_224019782.1;Ontology_term=GO:0005975,GO:0016773,GO:0016779;gbkey=CDS;gene=rfaE2;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353351.1;locus_tag=LDO50_RS13475;product=D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase;protein_id=WP_224019782.1;transl_table=11 NZ_CAJZAO010000123.1 RefSeq gene 3461 3703 . - . ID=gene-LDO50_RS13480;Name=LDO50_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13480;old_locus_tag=BVI1335_2090005 NZ_CAJZAO010000123.1 Protein Homology CDS 3461 3703 . - 0 ID=cds-WP_011886155.1;Parent=gene-LDO50_RS13480;Dbxref=GenBank:WP_011886155.1;Name=WP_011886155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546319.1;locus_tag=LDO50_RS13480;product=hypothetical protein;protein_id=WP_011886155.1;transl_table=11 NZ_CAJZAO010000123.1 RefSeq gene 3767 4496 . - . ID=gene-LDO50_RS13485;Name=LDO50_RS13485;end_range=4496,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13485;old_locus_tag=BVI1335_2090006;partial=true NZ_CAJZAO010000123.1 Protein Homology CDS 3767 4496 . - 1 ID=cds-WP_224019783.1;Parent=gene-LDO50_RS13485;Dbxref=GenBank:WP_224019783.1;Name=WP_224019783.1;end_range=4496,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407082.1;locus_tag=LDO50_RS13485;partial=true;product=type III pantothenate kinase;protein_id=WP_224019783.1;transl_table=11 ##sequence-region NZ_CAJZAO010000124.1 1 46916 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000124.1 RefSeq region 1 46916 . + . ID=NZ_CAJZAO010000124.1:1..46916;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_21 NZ_CAJZAO010000124.1 RefSeq gene 131 1771 . - . ID=gene-LDO50_RS13490;Name=LDO50_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13490;old_locus_tag=BVI1335_210001 NZ_CAJZAO010000124.1 Protein Homology CDS 131 1771 . - 0 ID=cds-WP_059463411.1;Parent=gene-LDO50_RS13490;Dbxref=GenBank:WP_059463411.1;Name=WP_059463411.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329413.1;locus_tag=LDO50_RS13490;product=GMC family oxidoreductase;protein_id=WP_059463411.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 2493 3935 . + . ID=gene-LDO50_RS13495;Name=LDO50_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13495;old_locus_tag=BVI1335_210002 NZ_CAJZAO010000124.1 Protein Homology CDS 2493 3935 . + 0 ID=cds-WP_059474625.1;Parent=gene-LDO50_RS13495;Dbxref=GenBank:WP_059474625.1;Name=WP_059474625.1;Ontology_term=GO:0006081,GO:0050269;gbkey=CDS;go_function=coniferyl-aldehyde dehydrogenase [NAD(P)+] activity|0050269||IEA;go_process=aldehyde metabolic process|0006081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100937.1;locus_tag=LDO50_RS13495;product=coniferyl aldehyde dehydrogenase;protein_id=WP_059474625.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 3994 5025 . - . ID=gene-LDO50_RS13500;Name=LDO50_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13500;old_locus_tag=BVI1335_210003 NZ_CAJZAO010000124.1 Protein Homology CDS 3994 5025 . - 0 ID=cds-WP_011886310.1;Parent=gene-LDO50_RS13500;Dbxref=GenBank:WP_011886310.1;Name=WP_011886310.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753012.1;locus_tag=LDO50_RS13500;product=serine/threonine protein kinase;protein_id=WP_011886310.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 5075 5287 . - . ID=gene-LDO50_RS13505;Name=LDO50_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13505;old_locus_tag=BVI1335_210004 NZ_CAJZAO010000124.1 Protein Homology CDS 5075 5287 . - 0 ID=cds-WP_011886311.1;Parent=gene-LDO50_RS13505;Dbxref=GenBank:WP_011886311.1;Name=WP_011886311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198969.1;locus_tag=LDO50_RS13505;product=hypothetical protein;protein_id=WP_011886311.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 6038 6919 . + . ID=gene-LDO50_RS13510;Name=LDO50_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13510;old_locus_tag=BVI1335_210006 NZ_CAJZAO010000124.1 Protein Homology CDS 6038 6919 . + 0 ID=cds-WP_059462203.1;Parent=gene-LDO50_RS13510;Dbxref=GenBank:WP_059462203.1;Name=WP_059462203.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214341.1;locus_tag=LDO50_RS13510;product=DMT family transporter;protein_id=WP_059462203.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 7211 7396 . + . ID=gene-LDO50_RS13515;Name=LDO50_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13515;old_locus_tag=BVI1335_210007 NZ_CAJZAO010000124.1 Protein Homology CDS 7211 7396 . + 0 ID=cds-WP_011886314.1;Parent=gene-LDO50_RS13515;Dbxref=GenBank:WP_011886314.1;Name=WP_011886314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100910.1;locus_tag=LDO50_RS13515;product=hypothetical protein;protein_id=WP_011886314.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 7528 8571 . - . ID=gene-LDO50_RS13520;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=LDO50_RS13520;old_locus_tag=BVI1335_210008 NZ_CAJZAO010000124.1 Protein Homology CDS 7528 8571 . - 0 ID=cds-WP_059462202.1;Parent=gene-LDO50_RS13520;Dbxref=GenBank:WP_059462202.1;Name=WP_059462202.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008923385.1;locus_tag=LDO50_RS13520;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_059462202.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 8756 8962 . + . ID=gene-LDO50_RS13525;Name=LDO50_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13525;old_locus_tag=BVI1335_210009 NZ_CAJZAO010000124.1 Protein Homology CDS 8756 8962 . + 0 ID=cds-WP_176314222.1;Parent=gene-LDO50_RS13525;Dbxref=GenBank:WP_176314222.1;Name=WP_176314222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024143.1;locus_tag=LDO50_RS13525;product=DUF3185 family protein;protein_id=WP_176314222.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 9116 9889 . - . ID=gene-LDO50_RS13530;Name=LDO50_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13530;old_locus_tag=BVI1335_210010 NZ_CAJZAO010000124.1 Protein Homology CDS 9116 9889 . - 0 ID=cds-WP_011886317.1;Parent=gene-LDO50_RS13530;Dbxref=GenBank:WP_011886317.1;Name=WP_011886317.1;Ontology_term=GO:0046872,GO:0051213;gbkey=CDS;go_function=metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364943.1;locus_tag=LDO50_RS13530;product=phytanoyl-CoA dioxygenase family protein;protein_id=WP_011886317.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 10242 10583 . + . ID=gene-LDO50_RS13535;Name=LDO50_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13535;old_locus_tag=BVI1335_210011 NZ_CAJZAO010000124.1 Protein Homology CDS 10242 10583 . + 0 ID=cds-WP_224019784.1;Parent=gene-LDO50_RS13535;Dbxref=GenBank:WP_224019784.1;Name=WP_224019784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886318.1;locus_tag=LDO50_RS13535;product=hypothetical protein;protein_id=WP_224019784.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 10691 11878 . - . ID=gene-LDO50_RS13540;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=LDO50_RS13540;old_locus_tag=BVI1335_210012 NZ_CAJZAO010000124.1 Protein Homology CDS 10691 11878 . - 0 ID=cds-WP_011886319.1;Parent=gene-LDO50_RS13540;Dbxref=GenBank:WP_011886319.1;Name=WP_011886319.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024140.1;locus_tag=LDO50_RS13540;product=methionine adenosyltransferase;protein_id=WP_011886319.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 12105 13028 . + . ID=gene-LDO50_RS13545;Name=lpxL;gbkey=Gene;gene=lpxL;gene_biotype=protein_coding;locus_tag=LDO50_RS13545;old_locus_tag=BVI1335_210013 NZ_CAJZAO010000124.1 Protein Homology CDS 12105 13028 . + 0 ID=cds-WP_290370718.1;Parent=gene-LDO50_RS13545;Dbxref=GenBank:WP_290370718.1;Name=WP_290370718.1;gbkey=CDS;gene=lpxL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482982.1;locus_tag=LDO50_RS13545;product=lauroyl acyltransferase LpxL;protein_id=WP_290370718.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 13246 14115 . + . ID=gene-LDO50_RS13550;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=LDO50_RS13550;old_locus_tag=BVI1335_210014 NZ_CAJZAO010000124.1 Protein Homology CDS 13246 14115 . + 0 ID=cds-WP_059668211.1;Parent=gene-LDO50_RS13550;Dbxref=GenBank:WP_059668211.1;Name=WP_059668211.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886321.1;locus_tag=LDO50_RS13550;product=diaminopimelate epimerase;protein_id=WP_059668211.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq pseudogene 14153 14709 . + . ID=gene-LDO50_RS13555;Name=LDO50_RS13555;end_range=14709,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS13555;old_locus_tag=BVI1335_210015;partial=true;pseudo=true NZ_CAJZAO010000124.1 Protein Homology CDS 14153 14709 . + 0 ID=cds-LDO50_RS13555;Parent=gene-LDO50_RS13555;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=14709,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895733.1;locus_tag=LDO50_RS13555;partial=true;product=DUF484 family protein;pseudo=true;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 14720 14880 . + . ID=gene-LDO50_RS31525;Name=LDO50_RS31525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31525;old_locus_tag=BVI1335_210017;partial=true;start_range=.,14720 NZ_CAJZAO010000124.1 Protein Homology CDS 14720 14880 . + 2 ID=cds-WP_443797774.1;Parent=gene-LDO50_RS31525;Dbxref=GenBank:WP_443797774.1;Name=WP_443797774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895733.1;locus_tag=LDO50_RS31525;partial=true;product=DUF484 family protein;protein_id=WP_443797774.1;start_range=.,14720;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 14891 15811 . + . ID=gene-LDO50_RS13560;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=LDO50_RS13560;old_locus_tag=BVI1335_210016 NZ_CAJZAO010000124.1 Protein Homology CDS 14891 15811 . + 0 ID=cds-WP_011886323.1;Parent=gene-LDO50_RS13560;Dbxref=GenBank:WP_011886323.1;Name=WP_011886323.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895732.1;locus_tag=LDO50_RS13560;product=tyrosine recombinase XerC;protein_id=WP_011886323.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 15885 17111 . + . ID=gene-LDO50_RS13565;Name=LDO50_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13565;old_locus_tag=BVI1335_210018 NZ_CAJZAO010000124.1 Protein Homology CDS 15885 17111 . + 0 ID=cds-WP_011886324.1;Parent=gene-LDO50_RS13565;Dbxref=GenBank:WP_011886324.1;Name=WP_011886324.1;Ontology_term=GO:0006364,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895731.1;locus_tag=LDO50_RS13565;product=class I SAM-dependent rRNA methyltransferase;protein_id=WP_011886324.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 17313 18386 . + . ID=gene-LDO50_RS13570;Name=LDO50_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13570;old_locus_tag=BVI1335_210020 NZ_CAJZAO010000124.1 Protein Homology CDS 17313 18386 . + 0 ID=cds-WP_011886325.1;Parent=gene-LDO50_RS13570;Dbxref=GenBank:WP_011886325.1;Name=WP_011886325.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414099.1;locus_tag=LDO50_RS13570;product=CobW family GTP-binding protein;protein_id=WP_011886325.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 18851 19267 . + . ID=gene-LDO50_RS13575;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=LDO50_RS13575;old_locus_tag=BVI1335_210021 NZ_CAJZAO010000124.1 Protein Homology CDS 18851 19267 . + 0 ID=cds-WP_006477498.1;Parent=gene-LDO50_RS13575;Dbxref=GenBank:WP_006477498.1;Name=WP_006477498.1;Ontology_term=GO:0006355,GO:0008270,GO:0019899;gbkey=CDS;gene=dksA;go_function=zinc ion binding|0008270||IEA,enzyme binding|0019899||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100883.1;locus_tag=LDO50_RS13575;product=RNA polymerase-binding protein DksA;protein_id=WP_006477498.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 19500 20036 . + . ID=gene-LDO50_RS13580;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=LDO50_RS13580;old_locus_tag=BVI1335_210022 NZ_CAJZAO010000124.1 Protein Homology CDS 19500 20036 . + 0 ID=cds-WP_011886326.1;Parent=gene-LDO50_RS13580;Dbxref=GenBank:WP_011886326.1;Name=WP_011886326.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760749.1;locus_tag=LDO50_RS13580;product=ATP-dependent protease subunit HslV;protein_id=WP_011886326.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 20047 21390 . + . ID=gene-LDO50_RS13585;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=LDO50_RS13585;old_locus_tag=BVI1335_210023 NZ_CAJZAO010000124.1 Protein Homology CDS 20047 21390 . + 0 ID=cds-WP_011886327.1;Parent=gene-LDO50_RS13585;Dbxref=GenBank:WP_011886327.1;Name=WP_011886327.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895729.1;locus_tag=LDO50_RS13585;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_011886327.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 21518 22060 . - . ID=gene-LDO50_RS13590;Name=LDO50_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13590;old_locus_tag=BVI1335_210024 NZ_CAJZAO010000124.1 Protein Homology CDS 21518 22060 . - 0 ID=cds-WP_011886328.1;Parent=gene-LDO50_RS13590;Dbxref=GenBank:WP_011886328.1;Name=WP_011886328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334600.1;locus_tag=LDO50_RS13590;product=response regulator transcription factor;protein_id=WP_011886328.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 22057 23460 . - . ID=gene-LDO50_RS13595;Name=LDO50_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13595;old_locus_tag=BVI1335_210025 NZ_CAJZAO010000124.1 Protein Homology CDS 22057 23460 . - 0 ID=cds-WP_034192463.1;Parent=gene-LDO50_RS13595;Dbxref=GenBank:WP_034192463.1;Name=WP_034192463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886329.1;locus_tag=LDO50_RS13595;product=ATP-binding protein;protein_id=WP_034192463.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 23559 23783 . - . ID=gene-LDO50_RS13600;Name=LDO50_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13600 NZ_CAJZAO010000124.1 Protein Homology CDS 23559 23783 . - 0 ID=cds-WP_045578690.1;Parent=gene-LDO50_RS13600;Dbxref=GenBank:WP_045578690.1;Name=WP_045578690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723852.1;locus_tag=LDO50_RS13600;product=cysteine-rich CWC family protein;protein_id=WP_045578690.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 24066 24965 . + . ID=gene-LDO50_RS13605;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=LDO50_RS13605;old_locus_tag=BVI1335_210026 NZ_CAJZAO010000124.1 Protein Homology CDS 24066 24965 . + 0 ID=cds-WP_011886331.1;Parent=gene-LDO50_RS13605;Dbxref=GenBank:WP_011886331.1;Name=WP_011886331.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490510.1;locus_tag=LDO50_RS13605;product=acetylglutamate kinase;protein_id=WP_011886331.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 24962 25753 . + . ID=gene-LDO50_RS13610;Name=LDO50_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13610;old_locus_tag=BVI1335_210027 NZ_CAJZAO010000124.1 Protein Homology CDS 24962 25753 . + 0 ID=cds-WP_059462199.1;Parent=gene-LDO50_RS13610;Dbxref=GenBank:WP_059462199.1;Name=WP_059462199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329425.1;locus_tag=LDO50_RS13610;product=pyrimidine 5'-nucleotidase;protein_id=WP_059462199.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 25720 26391 . + . ID=gene-LDO50_RS13615;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=LDO50_RS13615;old_locus_tag=BVI1335_210028 NZ_CAJZAO010000124.1 Protein Homology CDS 25720 26391 . + 0 ID=cds-WP_034192462.1;Parent=gene-LDO50_RS13615;Dbxref=GenBank:WP_034192462.1;Name=WP_034192462.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004548171.1;locus_tag=LDO50_RS13615;product=nucleoid occlusion factor SlmA;protein_id=WP_034192462.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 26395 26652 . + . ID=gene-LDO50_RS13620;Name=LDO50_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13620;old_locus_tag=BVI1335_210029 NZ_CAJZAO010000124.1 GeneMarkS-2+ CDS 26395 26652 . + 0 ID=cds-WP_155632160.1;Parent=gene-LDO50_RS13620;Dbxref=GenBank:WP_155632160.1;Name=WP_155632160.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS13620;product=hypothetical protein;protein_id=WP_155632160.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 26678 29668 . + . ID=gene-LDO50_RS13625;Name=LDO50_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13625;old_locus_tag=BVI1335_210030 NZ_CAJZAO010000124.1 Protein Homology CDS 26678 29668 . + 0 ID=cds-WP_224019786.1;Parent=gene-LDO50_RS13625;Dbxref=GenBank:WP_224019786.1;Name=WP_224019786.1;Ontology_term=GO:0015474,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=autotransporter activity|0015474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886334.1;locus_tag=LDO50_RS13625;product=autotransporter family protein;protein_id=WP_224019786.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 29927 31072 . + . ID=gene-LDO50_RS13630;Name=metX;gbkey=Gene;gene=metX;gene_biotype=protein_coding;locus_tag=LDO50_RS13630;old_locus_tag=BVI1335_210031 NZ_CAJZAO010000124.1 Protein Homology CDS 29927 31072 . + 0 ID=cds-WP_011886335.1;Parent=gene-LDO50_RS13630;Dbxref=GenBank:WP_011886335.1;Name=WP_011886335.1;Ontology_term=GO:0009086,GO:0008899;gbkey=CDS;gene=metX;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761998.1;locus_tag=LDO50_RS13630;product=homoserine O-succinyltransferase MetX;protein_id=WP_011886335.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 31069 31677 . + . ID=gene-LDO50_RS13635;Name=metW;gbkey=Gene;gene=metW;gene_biotype=protein_coding;locus_tag=LDO50_RS13635;old_locus_tag=BVI1335_210032 NZ_CAJZAO010000124.1 Protein Homology CDS 31069 31677 . + 0 ID=cds-WP_011886336.1;Parent=gene-LDO50_RS13635;Dbxref=GenBank:WP_011886336.1;Name=WP_011886336.1;Ontology_term=GO:0009086;gbkey=CDS;gene=metW;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658215.1;locus_tag=LDO50_RS13635;product=methionine biosynthesis protein MetW;protein_id=WP_011886336.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 31793 33214 . + . ID=gene-LDO50_RS13640;Name=LDO50_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13640;old_locus_tag=BVI1335_210033 NZ_CAJZAO010000124.1 Protein Homology CDS 31793 33214 . + 0 ID=cds-WP_034192460.1;Parent=gene-LDO50_RS13640;Dbxref=GenBank:WP_034192460.1;Name=WP_034192460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407205.1;locus_tag=LDO50_RS13640;product=AmpG family muropeptide MFS transporter;protein_id=WP_034192460.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 33204 34241 . + . ID=gene-LDO50_RS13645;Name=LDO50_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13645;old_locus_tag=BVI1335_210034 NZ_CAJZAO010000124.1 Protein Homology CDS 33204 34241 . + 0 ID=cds-WP_041493917.1;Parent=gene-LDO50_RS13645;Dbxref=GenBank:WP_041493917.1;Name=WP_041493917.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886338.1;locus_tag=LDO50_RS13645;product=M48 family metallopeptidase;protein_id=WP_041493917.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 34282 35226 . - . ID=gene-LDO50_RS13650;Name=LDO50_RS13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13650;old_locus_tag=BVI1335_210035 NZ_CAJZAO010000124.1 Protein Homology CDS 34282 35226 . - 0 ID=cds-WP_014723857.1;Parent=gene-LDO50_RS13650;Dbxref=GenBank:WP_014723857.1;Name=WP_014723857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886339.1;locus_tag=LDO50_RS13650;product=AraC family transcriptional regulator;protein_id=WP_014723857.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 35451 36503 . + . ID=gene-LDO50_RS13655;Name=LDO50_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13655;old_locus_tag=BVI1335_210036 NZ_CAJZAO010000124.1 Protein Homology CDS 35451 36503 . + 0 ID=cds-WP_224019787.1;Parent=gene-LDO50_RS13655;Dbxref=GenBank:WP_224019787.1;Name=WP_224019787.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895709.1;locus_tag=LDO50_RS13655;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_224019787.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 36629 37402 . - . ID=gene-LDO50_RS13660;Name=LDO50_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13660;old_locus_tag=BVI1335_210037 NZ_CAJZAO010000124.1 Protein Homology CDS 36629 37402 . - 0 ID=cds-WP_011886341.1;Parent=gene-LDO50_RS13660;Dbxref=GenBank:WP_011886341.1;Name=WP_011886341.1;Ontology_term=GO:0006281,GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090333.1;locus_tag=LDO50_RS13660;product=exodeoxyribonuclease III;protein_id=WP_011886341.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 37449 38288 . - . ID=gene-LDO50_RS13665;Name=LDO50_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13665;old_locus_tag=BVI1335_210038 NZ_CAJZAO010000124.1 Protein Homology CDS 37449 38288 . - 0 ID=cds-WP_045578687.1;Parent=gene-LDO50_RS13665;Dbxref=GenBank:WP_045578687.1;Name=WP_045578687.1;Ontology_term=GO:0006797,GO:0008976,GO:0016776;gbkey=CDS;go_function=polyphosphate kinase activity|0008976||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=polyphosphate metabolic process|0006797||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886342.1;locus_tag=LDO50_RS13665;product=polyphosphate kinase 2 family protein;protein_id=WP_045578687.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 38414 39886 . - . ID=gene-LDO50_RS13670;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=LDO50_RS13670;old_locus_tag=BVI1335_210039 NZ_CAJZAO010000124.1 Protein Homology CDS 38414 39886 . - 0 ID=cds-WP_014723858.1;Parent=gene-LDO50_RS13670;Dbxref=GenBank:WP_014723858.1;Name=WP_014723858.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190092.1;locus_tag=LDO50_RS13670;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_014723858.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 39891 41381 . - . ID=gene-LDO50_RS13675;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=LDO50_RS13675;old_locus_tag=BVI1335_210040 NZ_CAJZAO010000124.1 Protein Homology CDS 39891 41381 . - 0 ID=cds-WP_011886344.1;Parent=gene-LDO50_RS13675;Dbxref=GenBank:WP_011886344.1;Name=WP_011886344.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494379.1;locus_tag=LDO50_RS13675;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_011886344.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 41450 41749 . - . ID=gene-LDO50_RS13680;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=LDO50_RS13680;old_locus_tag=BVI1335_210041 NZ_CAJZAO010000124.1 Protein Homology CDS 41450 41749 . - 0 ID=cds-WP_006407213.1;Parent=gene-LDO50_RS13680;Dbxref=GenBank:WP_006407213.1;Name=WP_006407213.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012399478.1;locus_tag=LDO50_RS13680;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_006407213.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 42117 43160 . + . ID=gene-LDO50_RS13685;Name=LDO50_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13685;old_locus_tag=BVI1335_210042 NZ_CAJZAO010000124.1 Protein Homology CDS 42117 43160 . + 0 ID=cds-WP_004189550.1;Parent=gene-LDO50_RS13685;Dbxref=GenBank:WP_004189550.1;Name=WP_004189550.1;Ontology_term=GO:0000902,GO:0008360,GO:0005524,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA;go_process=cell morphogenesis|0000902||IEA,regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004628293.1;locus_tag=LDO50_RS13685;product=rod shape-determining protein;protein_id=WP_004189550.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 43289 44323 . + . ID=gene-LDO50_RS13690;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=LDO50_RS13690;old_locus_tag=BVI1335_210043 NZ_CAJZAO010000124.1 Protein Homology CDS 43289 44323 . + 0 ID=cds-WP_011886345.1;Parent=gene-LDO50_RS13690;Dbxref=GenBank:WP_011886345.1;Name=WP_011886345.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546475.1;locus_tag=LDO50_RS13690;product=rod shape-determining protein MreC;protein_id=WP_011886345.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 44320 44832 . + . ID=gene-LDO50_RS13695;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=LDO50_RS13695;old_locus_tag=BVI1335_210044 NZ_CAJZAO010000124.1 Protein Homology CDS 44320 44832 . + 0 ID=cds-WP_011886346.1;Parent=gene-LDO50_RS13695;Dbxref=GenBank:WP_011886346.1;Name=WP_011886346.1;Ontology_term=GO:0008360,GO:0016020;gbkey=CDS;gene=mreD;go_component=membrane|0016020||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189260.1;locus_tag=LDO50_RS13695;product=rod shape-determining protein MreD;protein_id=WP_011886346.1;transl_table=11 NZ_CAJZAO010000124.1 RefSeq gene 44943 46916 . + . ID=gene-LDO50_RS13700;Name=mrdA;end_range=46916,.;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=LDO50_RS13700;partial=true NZ_CAJZAO010000124.1 Protein Homology CDS 44943 46916 . + 0 ID=cds-WP_224019788.1;Parent=gene-LDO50_RS13700;Dbxref=GenBank:WP_224019788.1;Name=WP_224019788.1;Ontology_term=GO:0009252,GO:0003824,GO:0008658,GO:0016020;end_range=46916,.;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=catalytic activity|0003824||IEA,penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895703.1;locus_tag=LDO50_RS13700;partial=true;product=penicillin-binding protein 2;protein_id=WP_224019788.1;transl_table=11 ##sequence-region NZ_CAJZAO010000125.1 1 899 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000125.1 RefSeq region 1 899 . + . ID=NZ_CAJZAO010000125.1:1..899;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_210 NZ_CAJZAO010000125.1 RefSeq gene 1 343 . - . ID=gene-LDO50_RS13705;Name=LDO50_RS13705;end_range=343,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13705;partial=true;start_range=.,1 NZ_CAJZAO010000125.1 Protein Homology CDS 1 343 . - 2 ID=cds-WP_224019789.1;Parent=gene-LDO50_RS13705;Dbxref=GenBank:WP_224019789.1;Name=WP_224019789.1;end_range=343,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882305.1;locus_tag=LDO50_RS13705;partial=true;product=linear amide C-N hydrolase;protein_id=WP_224019789.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAO010000126.1 1 5999 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000126.1 RefSeq region 1 5999 . + . ID=NZ_CAJZAO010000126.1:1..5999;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_211 NZ_CAJZAO010000126.1 RefSeq gene 1 161 . - . ID=gene-LDO50_RS13710;Name=LDO50_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13710;partial=true;start_range=.,1 NZ_CAJZAO010000126.1 Protein Homology CDS 1 161 . - 0 ID=cds-WP_224019791.1;Parent=gene-LDO50_RS13710;Dbxref=GenBank:WP_224019791.1;Name=WP_224019791.1;Ontology_term=GO:0050661;gbkey=CDS;go_function=NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523211.1;locus_tag=LDO50_RS13710;partial=true;product=NAD(P)-binding domain-containing protein;protein_id=WP_224019791.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000126.1 RefSeq gene 252 1447 . - . ID=gene-LDO50_RS13715;Name=LDO50_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13715;old_locus_tag=BVI1335_2110002;partial=true;start_range=.,252 NZ_CAJZAO010000126.1 Protein Homology CDS 252 1447 . - 0 ID=cds-WP_224019790.1;Parent=gene-LDO50_RS13715;Dbxref=GenBank:WP_224019790.1;Name=WP_224019790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733459.1;locus_tag=LDO50_RS13715;partial=true;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_224019790.1;start_range=.,252;transl_table=11 NZ_CAJZAO010000126.1 RefSeq gene 1590 3302 . - . ID=gene-LDO50_RS13720;Name=LDO50_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13720;old_locus_tag=BVI1335_2110003 NZ_CAJZAO010000126.1 Protein Homology CDS 1590 3302 . - 0 ID=cds-WP_131753907.1;Parent=gene-LDO50_RS13720;Dbxref=GenBank:WP_131753907.1;Name=WP_131753907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530826.1;locus_tag=LDO50_RS13720;product=AMP-binding protein;protein_id=WP_131753907.1;transl_table=11 NZ_CAJZAO010000126.1 RefSeq gene 3535 4668 . - . ID=gene-LDO50_RS13725;Name=LDO50_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13725;old_locus_tag=BVI1335_2110005 NZ_CAJZAO010000126.1 Protein Homology CDS 3535 4668 . - 0 ID=cds-WP_014723911.1;Parent=gene-LDO50_RS13725;Dbxref=GenBank:WP_014723911.1;Name=WP_014723911.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603915.1;locus_tag=LDO50_RS13725;product=acyl-CoA dehydrogenase family protein;protein_id=WP_014723911.1;transl_table=11 NZ_CAJZAO010000126.1 RefSeq gene 4806 5840 . + . ID=gene-LDO50_RS13730;Name=LDO50_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13730;old_locus_tag=BVI1335_2110006 NZ_CAJZAO010000126.1 Protein Homology CDS 4806 5840 . + 0 ID=cds-WP_011880692.1;Parent=gene-LDO50_RS13730;Dbxref=GenBank:WP_011880692.1;Name=WP_011880692.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880692.1;locus_tag=LDO50_RS13730;product=AraC family transcriptional regulator;protein_id=WP_011880692.1;transl_table=11 ##sequence-region NZ_CAJZAO010000127.1 1 18442 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000127.1 RefSeq region 1 18442 . + . ID=NZ_CAJZAO010000127.1:1..18442;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_212 NZ_CAJZAO010000127.1 RefSeq gene 1 1618 . + . ID=gene-LDO50_RS13735;Name=LDO50_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13735;old_locus_tag=BVI1335_2120001;partial=true;start_range=.,1 NZ_CAJZAO010000127.1 Protein Homology CDS 1 1618 . + 1 ID=cds-WP_224019792.1;Parent=gene-LDO50_RS13735;Dbxref=GenBank:WP_224019792.1;Name=WP_224019792.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881369.1;locus_tag=LDO50_RS13735;partial=true;product=hydantoinase B/oxoprolinase family protein;protein_id=WP_224019792.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000127.1 RefSeq gene 2292 4295 . + . ID=gene-LDO50_RS13740;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=LDO50_RS13740;old_locus_tag=BVI1335_2120002 NZ_CAJZAO010000127.1 Protein Homology CDS 2292 4295 . + 0 ID=cds-WP_011881370.1;Parent=gene-LDO50_RS13740;Dbxref=GenBank:WP_011881370.1;Name=WP_011881370.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758253.1;locus_tag=LDO50_RS13740;product=cyclic di-GMP phosphodiesterase;protein_id=WP_011881370.1;transl_table=11 NZ_CAJZAO010000127.1 RefSeq gene 4350 5213 . - . ID=gene-LDO50_RS13745;Name=LDO50_RS13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13745;old_locus_tag=BVI1335_2120003 NZ_CAJZAO010000127.1 Protein Homology CDS 4350 5213 . - 0 ID=cds-WP_011881371.1;Parent=gene-LDO50_RS13745;Dbxref=GenBank:WP_011881371.1;Name=WP_011881371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397815.1;locus_tag=LDO50_RS13745;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_011881371.1;transl_table=11 NZ_CAJZAO010000127.1 RefSeq gene 5641 7554 . + . ID=gene-LDO50_RS13750;Name=LDO50_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13750;old_locus_tag=BVI1335_2120005 NZ_CAJZAO010000127.1 Protein Homology CDS 5641 7554 . + 0 ID=cds-WP_059696507.1;Parent=gene-LDO50_RS13750;Dbxref=GenBank:WP_059696507.1;Name=WP_059696507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660212.1;locus_tag=LDO50_RS13750;product=DUF3857 domain-containing transglutaminase family protein;protein_id=WP_059696507.1;transl_table=11 NZ_CAJZAO010000127.1 RefSeq gene 7644 8678 . - . ID=gene-LDO50_RS13755;Name=LDO50_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13755;old_locus_tag=BVI1335_2120006 NZ_CAJZAO010000127.1 Protein Homology CDS 7644 8678 . - 0 ID=cds-WP_046425906.1;Parent=gene-LDO50_RS13755;Dbxref=GenBank:WP_046425906.1;Name=WP_046425906.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365359.1;locus_tag=LDO50_RS13755;product=AraC family transcriptional regulator;protein_id=WP_046425906.1;transl_table=11 NZ_CAJZAO010000127.1 RefSeq gene 8749 9960 . + . ID=gene-LDO50_RS13760;Name=LDO50_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13760;old_locus_tag=BVI1335_2120007 NZ_CAJZAO010000127.1 Protein Homology CDS 8749 9960 . + 0 ID=cds-WP_011881374.1;Parent=gene-LDO50_RS13760;Dbxref=GenBank:WP_011881374.1;Name=WP_011881374.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881374.1;locus_tag=LDO50_RS13760;product=MFS transporter;protein_id=WP_011881374.1;transl_table=11 NZ_CAJZAO010000127.1 RefSeq gene 10043 10510 . - . ID=gene-LDO50_RS13765;Name=LDO50_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13765;old_locus_tag=BVI1335_2120008 NZ_CAJZAO010000127.1 Protein Homology CDS 10043 10510 . - 0 ID=cds-WP_224019793.1;Parent=gene-LDO50_RS13765;Dbxref=GenBank:WP_224019793.1;Name=WP_224019793.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749655.1;locus_tag=LDO50_RS13765;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_224019793.1;transl_table=11 NZ_CAJZAO010000127.1 RefSeq gene 10593 10961 . + . ID=gene-LDO50_RS13770;Name=LDO50_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13770;old_locus_tag=BVI1335_2120010 NZ_CAJZAO010000127.1 Protein Homology CDS 10593 10961 . + 0 ID=cds-WP_014724471.1;Parent=gene-LDO50_RS13770;Dbxref=GenBank:WP_014724471.1;Name=WP_014724471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758266.1;locus_tag=LDO50_RS13770;product=YciI family protein;protein_id=WP_014724471.1;transl_table=11 NZ_CAJZAO010000127.1 RefSeq gene 11063 11680 . + . ID=gene-LDO50_RS13775;Name=LDO50_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13775;old_locus_tag=BVI1335_2120009 NZ_CAJZAO010000127.1 Protein Homology CDS 11063 11680 . + 0 ID=cds-WP_045578258.1;Parent=gene-LDO50_RS13775;Dbxref=GenBank:WP_045578258.1;Name=WP_045578258.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900310.1;locus_tag=LDO50_RS13775;product=glutathione S-transferase family protein;protein_id=WP_045578258.1;transl_table=11 NZ_CAJZAO010000127.1 RefSeq gene 11947 12849 . - . ID=gene-LDO50_RS13780;Name=LDO50_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13780;old_locus_tag=BVI1335_2120011 NZ_CAJZAO010000127.1 Protein Homology CDS 11947 12849 . - 0 ID=cds-WP_372586096.1;Parent=gene-LDO50_RS13780;Dbxref=GenBank:WP_372586096.1;Name=WP_372586096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724473.1;locus_tag=LDO50_RS13780;product=ornithine cyclodeaminase family protein;protein_id=WP_372586096.1;transl_table=11 NZ_CAJZAO010000127.1 RefSeq gene 13030 14160 . - . ID=gene-LDO50_RS13785;Name=LDO50_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13785;old_locus_tag=BVI1335_2120012 NZ_CAJZAO010000127.1 Protein Homology CDS 13030 14160 . - 0 ID=cds-WP_224019795.1;Parent=gene-LDO50_RS13785;Dbxref=GenBank:WP_224019795.1;Name=WP_224019795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758270.1;locus_tag=LDO50_RS13785;product=DSD1 family PLP-dependent enzyme;protein_id=WP_224019795.1;transl_table=11 NZ_CAJZAO010000127.1 RefSeq gene 14254 15198 . - . ID=gene-LDO50_RS13790;Name=LDO50_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13790;old_locus_tag=BVI1335_2120013 NZ_CAJZAO010000127.1 Protein Homology CDS 14254 15198 . - 0 ID=cds-WP_014724475.1;Parent=gene-LDO50_RS13790;Dbxref=GenBank:WP_014724475.1;Name=WP_014724475.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724475.1;locus_tag=LDO50_RS13790;product=LysR family transcriptional regulator;protein_id=WP_014724475.1;transl_table=11 NZ_CAJZAO010000127.1 RefSeq gene 15425 15772 . + . ID=gene-LDO50_RS13795;Name=LDO50_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13795;old_locus_tag=BVI1335_2120014 NZ_CAJZAO010000127.1 Protein Homology CDS 15425 15772 . + 0 ID=cds-WP_011881381.1;Parent=gene-LDO50_RS13795;Dbxref=GenBank:WP_011881381.1;Name=WP_011881381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881381.1;locus_tag=LDO50_RS13795;product=DUF4148 domain-containing protein;protein_id=WP_011881381.1;transl_table=11 NZ_CAJZAO010000127.1 RefSeq gene 16656 17258 . + . ID=gene-LDO50_RS13800;Name=LDO50_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13800;old_locus_tag=BVI1335_2120016 NZ_CAJZAO010000127.1 Protein Homology CDS 16656 17258 . + 0 ID=cds-WP_034194897.1;Parent=gene-LDO50_RS13800;Dbxref=GenBank:WP_034194897.1;Name=WP_034194897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493132.1;locus_tag=LDO50_RS13800;product=DUF2760 domain-containing protein;protein_id=WP_034194897.1;transl_table=11 NZ_CAJZAO010000127.1 RefSeq gene 17255 18442 . + . ID=gene-LDO50_RS13805;Name=LDO50_RS13805;end_range=18442,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13805;partial=true NZ_CAJZAO010000127.1 Protein Homology CDS 17255 18442 . + 0 ID=cds-WP_224019796.1;Parent=gene-LDO50_RS13805;Dbxref=GenBank:WP_224019796.1;Name=WP_224019796.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662;end_range=18442,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694612.1;locus_tag=LDO50_RS13805;partial=true;product=Hsp70 family protein;protein_id=WP_224019796.1;transl_table=11 ##sequence-region NZ_CAJZAO010000128.1 1 15216 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000128.1 RefSeq region 1 15216 . + . ID=NZ_CAJZAO010000128.1:1..15216;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_213 NZ_CAJZAO010000128.1 RefSeq gene 621 941 . - . ID=gene-LDO50_RS13810;Name=LDO50_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13810;old_locus_tag=BVI1335_2130004 NZ_CAJZAO010000128.1 Protein Homology CDS 621 941 . - 0 ID=cds-WP_011879712.1;Parent=gene-LDO50_RS13810;Dbxref=GenBank:WP_011879712.1;Name=WP_011879712.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879712.1;locus_tag=LDO50_RS13810;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_011879712.1;transl_table=11 NZ_CAJZAO010000128.1 RefSeq gene 935 1183 . - . ID=gene-LDO50_RS13815;Name=LDO50_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13815;old_locus_tag=BVI1335_2130005 NZ_CAJZAO010000128.1 Protein Homology CDS 935 1183 . - 0 ID=cds-WP_045579168.1;Parent=gene-LDO50_RS13815;Dbxref=GenBank:WP_045579168.1;Name=WP_045579168.1;Ontology_term=GO:0003677,GO:0097351;gbkey=CDS;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006053174.1;locus_tag=LDO50_RS13815;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_045579168.1;transl_table=11 NZ_CAJZAO010000128.1 RefSeq gene 1391 2580 . + . ID=gene-LDO50_RS13820;Name=LDO50_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13820;old_locus_tag=BVI1335_2130008 NZ_CAJZAO010000128.1 Protein Homology CDS 1391 1700 . + 0 ID=cds-WP_155744937.1;Parent=gene-LDO50_RS13820;Dbxref=GenBank:WP_155744937.1;Name=WP_155744937.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558222.1;locus_tag=LDO50_RS13820;product=IS3 family transposase;protein_id=WP_155744937.1;transl_table=11 NZ_CAJZAO010000128.1 Protein Homology CDS 1700 2580 . + 2 ID=cds-WP_155744937.1;Parent=gene-LDO50_RS13820;Dbxref=GenBank:WP_155744937.1;Name=WP_155744937.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558222.1;locus_tag=LDO50_RS13820;product=IS3 family transposase;protein_id=WP_155744937.1;transl_table=11 NZ_CAJZAO010000128.1 RefSeq gene 2728 3837 . - . ID=gene-LDO50_RS13825;Name=LDO50_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13825;old_locus_tag=BVI1335_2130009 NZ_CAJZAO010000128.1 Protein Homology CDS 2728 3837 . - 0 ID=cds-WP_011879708.1;Parent=gene-LDO50_RS13825;Dbxref=GenBank:WP_011879708.1;Name=WP_011879708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879708.1;locus_tag=LDO50_RS13825;product=ArsO family NAD(P)H-dependent flavin-containing monooxygenase;protein_id=WP_011879708.1;transl_table=11 NZ_CAJZAO010000128.1 RefSeq gene 3875 4267 . - . ID=gene-LDO50_RS13830;Name=LDO50_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13830;old_locus_tag=BVI1335_2130010 NZ_CAJZAO010000128.1 Protein Homology CDS 3875 4267 . - 0 ID=cds-WP_011879707.1;Parent=gene-LDO50_RS13830;Dbxref=GenBank:WP_011879707.1;Name=WP_011879707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879707.1;locus_tag=LDO50_RS13830;product=DUF2703 domain-containing protein;protein_id=WP_011879707.1;transl_table=11 NZ_CAJZAO010000128.1 RefSeq gene 4288 4638 . - . ID=gene-LDO50_RS13835;Name=LDO50_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13835;old_locus_tag=BVI1335_2130011 NZ_CAJZAO010000128.1 Protein Homology CDS 4288 4638 . - 0 ID=cds-WP_043292566.1;Parent=gene-LDO50_RS13835;Dbxref=GenBank:WP_043292566.1;Name=WP_043292566.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014433.6;locus_tag=LDO50_RS13835;product=ArsA-related P-loop ATPase;protein_id=WP_043292566.1;transl_table=11 NZ_CAJZAO010000128.1 RefSeq pseudogene 4843 4986 . - . ID=gene-LDO50_RS13840;Name=LDO50_RS13840;end_range=4986,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS13840;partial=true;pseudo=true;start_range=.,4843 NZ_CAJZAO010000128.1 Protein Homology CDS 4843 4986 . - 0 ID=cds-LDO50_RS13840;Parent=gene-LDO50_RS13840;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0003677;end_range=4986,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882012.1;locus_tag=LDO50_RS13840;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,4843;transl_table=11 NZ_CAJZAO010000128.1 RefSeq gene 4987 5430 . - . ID=gene-LDO50_RS13845;Name=LDO50_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13845;old_locus_tag=BVI1335_2130013 NZ_CAJZAO010000128.1 Protein Homology CDS 4987 5430 . - 0 ID=cds-WP_043292565.1;Parent=gene-LDO50_RS13845;Dbxref=GenBank:WP_043292565.1;Name=WP_043292565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880245.1;locus_tag=LDO50_RS13845;product=hypothetical protein;protein_id=WP_043292565.1;transl_table=11 NZ_CAJZAO010000128.1 RefSeq pseudogene 5661 6640 . + . ID=gene-LDO50_RS13850;Name=LDO50_RS13850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS13850;pseudo=true NZ_CAJZAO010000128.1 Protein Homology CDS 5661 6640 . + 0 ID=cds-LDO50_RS13850;Parent=gene-LDO50_RS13850;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412423.1;locus_tag=LDO50_RS13850;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CAJZAO010000128.1 RefSeq gene 6980 8677 . - . ID=gene-LDO50_RS13855;Name=LDO50_RS13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13855;old_locus_tag=BVI1335_2130017 NZ_CAJZAO010000128.1 Protein Homology CDS 6980 8677 . - 0 ID=cds-WP_176296042.1;Parent=gene-LDO50_RS13855;Dbxref=GenBank:WP_176296042.1;Name=WP_176296042.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879705.1;locus_tag=LDO50_RS13855;product=methyl-accepting chemotaxis protein;protein_id=WP_176296042.1;transl_table=11 NZ_CAJZAO010000128.1 RefSeq gene 8888 9307 . - . ID=gene-LDO50_RS13860;Name=LDO50_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13860;old_locus_tag=BVI1335_2130018 NZ_CAJZAO010000128.1 GeneMarkS-2+ CDS 8888 9307 . - 0 ID=cds-WP_224019797.1;Parent=gene-LDO50_RS13860;Dbxref=GenBank:WP_224019797.1;Name=WP_224019797.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS13860;product=hypothetical protein;protein_id=WP_224019797.1;transl_table=11 NZ_CAJZAO010000128.1 RefSeq gene 9338 10078 . - . ID=gene-LDO50_RS13865;Name=LDO50_RS13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13865;old_locus_tag=BVI1335_2130019 NZ_CAJZAO010000128.1 Protein Homology CDS 9338 10078 . - 0 ID=cds-WP_224019798.1;Parent=gene-LDO50_RS13865;Dbxref=GenBank:WP_224019798.1;Name=WP_224019798.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012772.6;locus_tag=LDO50_RS13865;product=EAL and HDOD domain-containing protein;protein_id=WP_224019798.1;transl_table=11 NZ_CAJZAO010000128.1 RefSeq gene 11079 12575 . + . ID=gene-LDO50_RS13870;Name=LDO50_RS13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13870;old_locus_tag=BVI1335_2130023 NZ_CAJZAO010000128.1 Protein Homology CDS 11079 12575 . + 0 ID=cds-WP_224019799.1;Parent=gene-LDO50_RS13870;Dbxref=GenBank:WP_224019799.1;Name=WP_224019799.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880279.1;locus_tag=LDO50_RS13870;product=sensor domain-containing diguanylate cyclase;protein_id=WP_224019799.1;transl_table=11 NZ_CAJZAO010000128.1 RefSeq gene 12926 13564 . + . ID=gene-LDO50_RS13875;Name=LDO50_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13875;old_locus_tag=BVI1335_2130024 NZ_CAJZAO010000128.1 Protein Homology CDS 12926 13564 . + 0 ID=cds-WP_011880280.1;Parent=gene-LDO50_RS13875;Dbxref=GenBank:WP_011880280.1;Name=WP_011880280.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880238.1;locus_tag=LDO50_RS13875;product=response regulator;protein_id=WP_011880280.1;transl_table=11 NZ_CAJZAO010000128.1 RefSeq gene 14176 14475 . - . ID=gene-LDO50_RS13880;Name=LDO50_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13880;old_locus_tag=BVI1335_2130028 NZ_CAJZAO010000128.1 Protein Homology CDS 14176 14475 . - 0 ID=cds-WP_059497492.1;Parent=gene-LDO50_RS13880;Dbxref=GenBank:WP_059497492.1;Name=WP_059497492.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481154.1;locus_tag=LDO50_RS13880;product=H-NS histone family protein;protein_id=WP_059497492.1;transl_table=11 NZ_CAJZAO010000128.1 RefSeq pseudogene 14941 15216 . - . ID=gene-LDO50_RS13885;Name=LDO50_RS13885;end_range=15216,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS13885;partial=true;pseudo=true NZ_CAJZAO010000128.1 Protein Homology CDS 14941 15216 . - 0 ID=cds-LDO50_RS13885;Parent=gene-LDO50_RS13885;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=15216,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003266198.1;locus_tag=LDO50_RS13885;partial=true;product=DUF2334 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000129.1 1 11933 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000129.1 RefSeq region 1 11933 . + . ID=NZ_CAJZAO010000129.1:1..11933;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_214 NZ_CAJZAO010000129.1 RefSeq pseudogene 1 329 . - . ID=gene-LDO50_RS13890;Name=LDO50_RS13890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS13890;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000129.1 Protein Homology CDS 1 329 . - 0 ID=cds-LDO50_RS13890;Parent=gene-LDO50_RS13890;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880089.1;locus_tag=LDO50_RS13890;partial=true;product=AMP-dependent synthetase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000129.1 RefSeq gene 326 946 . - . ID=gene-LDO50_RS13895;Name=LDO50_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13895;old_locus_tag=BVI1335_2140002 NZ_CAJZAO010000129.1 Protein Homology CDS 326 946 . - 0 ID=cds-WP_059582699.1;Parent=gene-LDO50_RS13895;Dbxref=GenBank:WP_059582699.1;Name=WP_059582699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880088.1;locus_tag=LDO50_RS13895;product=hypothetical protein;protein_id=WP_059582699.1;transl_table=11 NZ_CAJZAO010000129.1 RefSeq gene 964 1212 . - . ID=gene-LDO50_RS13900;Name=LDO50_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13900;old_locus_tag=BVI1335_2140003 NZ_CAJZAO010000129.1 Protein Homology CDS 964 1212 . - 0 ID=cds-WP_011880087.1;Parent=gene-LDO50_RS13900;Dbxref=GenBank:WP_011880087.1;Name=WP_011880087.1;Ontology_term=GO:0006633;gbkey=CDS;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658620.1;locus_tag=LDO50_RS13900;product=acyl carrier protein;protein_id=WP_011880087.1;transl_table=11 NZ_CAJZAO010000129.1 RefSeq gene 1209 1514 . - . ID=gene-LDO50_RS13905;Name=LDO50_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13905;old_locus_tag=BVI1335_2140004 NZ_CAJZAO010000129.1 Protein Homology CDS 1209 1514 . - 0 ID=cds-WP_059454731.1;Parent=gene-LDO50_RS13905;Dbxref=GenBank:WP_059454731.1;Name=WP_059454731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402450.1;locus_tag=LDO50_RS13905;product=phosphopantetheine-binding protein;protein_id=WP_059454731.1;transl_table=11 NZ_CAJZAO010000129.1 RefSeq gene 1489 2283 . - . ID=gene-LDO50_RS13910;Name=LDO50_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13910;old_locus_tag=BVI1335_2140005 NZ_CAJZAO010000129.1 Protein Homology CDS 1489 2283 . - 0 ID=cds-WP_011880085.1;Parent=gene-LDO50_RS13910;Dbxref=GenBank:WP_011880085.1;Name=WP_011880085.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758586.1;locus_tag=LDO50_RS13910;product=lysophospholipid acyltransferase family protein;protein_id=WP_011880085.1;transl_table=11 NZ_CAJZAO010000129.1 RefSeq gene 2267 2971 . - . ID=gene-LDO50_RS13915;Name=LDO50_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13915;old_locus_tag=BVI1335_2140006 NZ_CAJZAO010000129.1 Protein Homology CDS 2267 2971 . - 0 ID=cds-WP_224019801.1;Parent=gene-LDO50_RS13915;Dbxref=GenBank:WP_224019801.1;Name=WP_224019801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402452.1;locus_tag=LDO50_RS13915;product=beta-ketoacyl synthase chain length factor;protein_id=WP_224019801.1;transl_table=11 NZ_CAJZAO010000129.1 RefSeq gene 3742 5145 . - . ID=gene-LDO50_RS13920;Name=LDO50_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13920;old_locus_tag=BVI1335_2140008 NZ_CAJZAO010000129.1 Protein Homology CDS 3742 5145 . - 0 ID=cds-WP_224019802.1;Parent=gene-LDO50_RS13920;Dbxref=GenBank:WP_224019802.1;Name=WP_224019802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880081.1;locus_tag=LDO50_RS13920;product=ATP-binding protein;protein_id=WP_224019802.1;transl_table=11 NZ_CAJZAO010000129.1 RefSeq gene 5200 6657 . - . ID=gene-LDO50_RS13925;Name=LDO50_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13925;old_locus_tag=BVI1335_2140009 NZ_CAJZAO010000129.1 Protein Homology CDS 5200 6657 . - 0 ID=cds-WP_059454617.1;Parent=gene-LDO50_RS13925;Dbxref=GenBank:WP_059454617.1;Name=WP_059454617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880080.1;locus_tag=LDO50_RS13925;product=nickel-dependent hydrogenase large subunit;protein_id=WP_059454617.1;transl_table=11 NZ_CAJZAO010000129.1 RefSeq gene 6666 7703 . - . ID=gene-LDO50_RS13930;Name=LDO50_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13930;old_locus_tag=BVI1335_2140010 NZ_CAJZAO010000129.1 Protein Homology CDS 6666 7703 . - 0 ID=cds-WP_224019803.1;Parent=gene-LDO50_RS13930;Dbxref=GenBank:WP_224019803.1;Name=WP_224019803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725821.1;locus_tag=LDO50_RS13930;product=HupU protein;protein_id=WP_224019803.1;transl_table=11 NZ_CAJZAO010000129.1 RefSeq gene 7700 9202 . - . ID=gene-LDO50_RS13935;Name=LDO50_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13935;old_locus_tag=BVI1335_2140011 NZ_CAJZAO010000129.1 Protein Homology CDS 7700 9202 . - 0 ID=cds-WP_059457505.1;Parent=gene-LDO50_RS13935;Dbxref=GenBank:WP_059457505.1;Name=WP_059457505.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677,GO:0005524;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880078.1;locus_tag=LDO50_RS13935;product=sigma-54-dependent transcriptional regulator;protein_id=WP_059457505.1;transl_table=11 NZ_CAJZAO010000129.1 RefSeq gene 9323 10399 . - . ID=gene-LDO50_RS13940;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=LDO50_RS13940;old_locus_tag=BVI1335_2140012 NZ_CAJZAO010000129.1 Protein Homology CDS 9323 10399 . - 0 ID=cds-WP_059457504.1;Parent=gene-LDO50_RS13940;Dbxref=GenBank:WP_059457504.1;Name=WP_059457504.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880077.1;locus_tag=LDO50_RS13940;product=hydrogenase expression/formation protein HypE;protein_id=WP_059457504.1;transl_table=11 NZ_CAJZAO010000129.1 RefSeq gene 10396 11532 . - . ID=gene-LDO50_RS13945;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=LDO50_RS13945;old_locus_tag=BVI1335_2140013 NZ_CAJZAO010000129.1 Protein Homology CDS 10396 11532 . - 0 ID=cds-WP_059457503.1;Parent=gene-LDO50_RS13945;Dbxref=GenBank:WP_059457503.1;Name=WP_059457503.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880076.1;locus_tag=LDO50_RS13945;product=hydrogenase formation protein HypD;protein_id=WP_059457503.1;transl_table=11 NZ_CAJZAO010000129.1 RefSeq gene 11529 11786 . - . ID=gene-LDO50_RS13950;Name=LDO50_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13950;old_locus_tag=BVI1335_2140014 NZ_CAJZAO010000129.1 Protein Homology CDS 11529 11786 . - 0 ID=cds-WP_059454612.1;Parent=gene-LDO50_RS13950;Dbxref=GenBank:WP_059454612.1;Name=WP_059454612.1;Ontology_term=GO:0051604,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880075.1;locus_tag=LDO50_RS13950;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WP_059454612.1;transl_table=11 ##sequence-region NZ_CAJZAO010000130.1 1 1272 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000130.1 RefSeq region 1 1272 . + . ID=NZ_CAJZAO010000130.1:1..1272;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_215 NZ_CAJZAO010000130.1 RefSeq gene 1 803 . - . ID=gene-LDO50_RS13960;Name=LDO50_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13960;partial=true;start_range=.,1 NZ_CAJZAO010000130.1 Protein Homology CDS 1 803 . - 0 ID=cds-WP_224019804.1;Parent=gene-LDO50_RS13960;Dbxref=GenBank:WP_224019804.1;Name=WP_224019804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881427.1;locus_tag=LDO50_RS13960;partial=true;product=collagen-like triple helix repeat-containing protein;protein_id=WP_224019804.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAO010000131.1 1 17152 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000131.1 RefSeq region 1 17152 . + . ID=NZ_CAJZAO010000131.1:1..17152;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_216 NZ_CAJZAO010000131.1 RefSeq gene 494 694 . + . ID=gene-LDO50_RS31530;Name=LDO50_RS31530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31530 NZ_CAJZAO010000131.1 GeneMarkS-2+ CDS 494 694 . + 0 ID=cds-WP_014725296.1;Parent=gene-LDO50_RS31530;Dbxref=GenBank:WP_014725296.1;Name=WP_014725296.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS31530;product=hypothetical protein;protein_id=WP_014725296.1;transl_table=11 NZ_CAJZAO010000131.1 RefSeq pseudogene 759 13449 . + . ID=gene-LDO50_RS13975;Name=LDO50_RS13975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS13975;old_locus_tag=BVI1335_2160005;pseudo=true NZ_CAJZAO010000131.1 Protein Homology CDS 759 13449 . + 0 ID=cds-LDO50_RS13975;Parent=gene-LDO50_RS13975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882523.1;locus_tag=LDO50_RS13975;product=filamentous haemagglutinin family protein;pseudo=true;transl_table=11 NZ_CAJZAO010000131.1 RefSeq gene 13836 15170 . - . ID=gene-LDO50_RS13980;Name=LDO50_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS13980;old_locus_tag=BVI1335_2160007 NZ_CAJZAO010000131.1 Protein Homology CDS 13836 15170 . - 0 ID=cds-WP_011882522.1;Parent=gene-LDO50_RS13980;Dbxref=GenBank:WP_011882522.1;Name=WP_011882522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725294.1;locus_tag=LDO50_RS13980;product=substrate-binding domain-containing protein;protein_id=WP_011882522.1;transl_table=11 NZ_CAJZAO010000131.1 RefSeq gene 15824 17041 . + . ID=gene-LDO50_RS13985;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=LDO50_RS13985;old_locus_tag=BVI1335_2160009 NZ_CAJZAO010000131.1 Protein Homology CDS 15824 17041 . + 0 ID=cds-WP_014725293.1;Parent=gene-LDO50_RS13985;Dbxref=GenBank:WP_014725293.1;Name=WP_014725293.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477248.1;locus_tag=LDO50_RS13985;product=type II secretion system inner membrane protein GspF;protein_id=WP_014725293.1;transl_table=11 ##sequence-region NZ_CAJZAO010000132.1 1 6865 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000132.1 RefSeq region 1 6865 . + . ID=NZ_CAJZAO010000132.1:1..6865;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_217 NZ_CAJZAO010000132.1 RefSeq gene 1 397 . - . ID=gene-LDO50_RS31065;Name=LDO50_RS31065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31065;partial=true;start_range=.,1 NZ_CAJZAO010000132.1 GeneMarkS-2+ CDS 1 397 . - 0 ID=cds-WP_372586097.1;Parent=gene-LDO50_RS31065;Dbxref=GenBank:WP_372586097.1;Name=WP_372586097.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS31065;partial=true;product=hypothetical protein;protein_id=WP_372586097.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000132.1 RefSeq gene 457 1266 . + . ID=gene-LDO50_RS13995;Name=sctT;gbkey=Gene;gene=sctT;gene_biotype=protein_coding;locus_tag=LDO50_RS13995;old_locus_tag=BVI1335_2170002 NZ_CAJZAO010000132.1 Protein Homology CDS 457 1266 . + 0 ID=cds-WP_034194305.1;Parent=gene-LDO50_RS13995;Dbxref=GenBank:WP_034194305.1;Name=WP_034194305.1;Ontology_term=GO:0030254,GO:0016020;gbkey=CDS;gene=sctT;go_component=membrane|0016020||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754499.1;locus_tag=LDO50_RS13995;product=type III secretion system export apparatus subunit SctT;protein_id=WP_034194305.1;transl_table=11 NZ_CAJZAO010000132.1 RefSeq gene 1292 2320 . + . ID=gene-LDO50_RS14000;Name=LDO50_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14000;old_locus_tag=BVI1335_2170003 NZ_CAJZAO010000132.1 Protein Homology CDS 1292 2320 . + 0 ID=cds-WP_011882601.1;Parent=gene-LDO50_RS14000;Dbxref=GenBank:WP_011882601.1;Name=WP_011882601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882601.1;locus_tag=LDO50_RS14000;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;protein_id=WP_011882601.1;transl_table=11 NZ_CAJZAO010000132.1 RefSeq gene 2587 4554 . + . ID=gene-LDO50_RS14005;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=LDO50_RS14005;old_locus_tag=BVI1335_2170004 NZ_CAJZAO010000132.1 Protein Homology CDS 2587 4554 . + 0 ID=cds-WP_212162853.1;Parent=gene-LDO50_RS14005;Dbxref=GenBank:WP_212162853.1;Name=WP_212162853.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898780.1;locus_tag=LDO50_RS14005;product=asparagine synthase (glutamine-hydrolyzing);protein_id=WP_212162853.1;transl_table=11 NZ_CAJZAO010000132.1 RefSeq gene 4651 6688 . - . ID=gene-LDO50_RS14010;Name=LDO50_RS14010;end_range=6688,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14010;old_locus_tag=BVI1335_2170005;partial=true NZ_CAJZAO010000132.1 Protein Homology CDS 4651 6688 . - 1 ID=cds-WP_443797775.1;Parent=gene-LDO50_RS14010;Dbxref=GenBank:WP_443797775.1;Name=WP_443797775.1;end_range=6688,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725396.1;locus_tag=LDO50_RS14010;partial=true;product=LWXIA domain-containing protein;protein_id=WP_443797775.1;transl_table=11 ##sequence-region NZ_CAJZAO010000133.1 1 3075 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000133.1 RefSeq region 1 3075 . + . ID=NZ_CAJZAO010000133.1:1..3075;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_218 NZ_CAJZAO010000133.1 RefSeq gene 1 1114 . - . ID=gene-LDO50_RS14015;Name=LDO50_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14015;partial=true;start_range=.,1 NZ_CAJZAO010000133.1 Protein Homology CDS 1 1114 . - 0 ID=cds-WP_224019805.1;Parent=gene-LDO50_RS14015;Dbxref=GenBank:WP_224019805.1;Name=WP_224019805.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414312.1;locus_tag=LDO50_RS14015;partial=true;product=Na+/H+ antiporter;protein_id=WP_224019805.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000133.1 RefSeq gene 1404 2690 . + . ID=gene-LDO50_RS14020;Name=LDO50_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14020;old_locus_tag=BVI1335_2180002 NZ_CAJZAO010000133.1 Protein Homology CDS 1404 2690 . + 0 ID=cds-WP_011886184.1;Parent=gene-LDO50_RS14020;Dbxref=GenBank:WP_011886184.1;Name=WP_011886184.1;Ontology_term=GO:0007165,GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895877.1;locus_tag=LDO50_RS14020;product=sensor domain-containing phosphodiesterase;protein_id=WP_011886184.1;transl_table=11 NZ_CAJZAO010000133.1 RefSeq gene 2815 3075 . + . ID=gene-LDO50_RS14025;Name=LDO50_RS14025;end_range=3075,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14025;partial=true NZ_CAJZAO010000133.1 Protein Homology CDS 2815 3075 . + 0 ID=cds-WP_372586098.1;Parent=gene-LDO50_RS14025;Dbxref=GenBank:WP_372586098.1;Name=WP_372586098.1;Ontology_term=GO:0055070,GO:0005507;end_range=3075,.;gbkey=CDS;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723753.1;locus_tag=LDO50_RS14025;partial=true;product=copper homeostasis protein CutC;protein_id=WP_372586098.1;transl_table=11 ##sequence-region NZ_CAJZAO010000134.1 1 1236 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000134.1 RefSeq region 1 1236 . + . ID=NZ_CAJZAO010000134.1:1..1236;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_219 NZ_CAJZAO010000134.1 RefSeq gene 48 1168 . - . ID=gene-LDO50_RS14030;Name=LDO50_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14030;old_locus_tag=BVI1335_2190001 NZ_CAJZAO010000134.1 Protein Homology CDS 910 1168 . - 0 ID=cds-WP_106919332.1;Parent=gene-LDO50_RS14030;Dbxref=GenBank:WP_106919332.1;Name=WP_106919332.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558188.1;locus_tag=LDO50_RS14030;product=IS3-like element IS407 family transposase;protein_id=WP_106919332.1;transl_table=11 NZ_CAJZAO010000134.1 Protein Homology CDS 48 910 . - 2 ID=cds-WP_106919332.1;Parent=gene-LDO50_RS14030;Dbxref=GenBank:WP_106919332.1;Name=WP_106919332.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558188.1;locus_tag=LDO50_RS14030;product=IS3-like element IS407 family transposase;protein_id=WP_106919332.1;transl_table=11 ##sequence-region NZ_CAJZAO010000135.1 1 119376 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000135.1 RefSeq region 1 119376 . + . ID=NZ_CAJZAO010000135.1:1..119376;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_22 NZ_CAJZAO010000135.1 RefSeq gene 84 506 . - . ID=gene-LDO50_RS14035;Name=LDO50_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14035;old_locus_tag=BVI1335_220001 NZ_CAJZAO010000135.1 Protein Homology CDS 84 506 . - 0 ID=cds-WP_034193776.1;Parent=gene-LDO50_RS14035;Dbxref=GenBank:WP_034193776.1;Name=WP_034193776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724378.1;locus_tag=LDO50_RS14035;product=hypothetical protein;protein_id=WP_034193776.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 564 2414 . - . ID=gene-LDO50_RS14040;Name=LDO50_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14040;old_locus_tag=BVI1335_220002 NZ_CAJZAO010000135.1 Protein Homology CDS 564 2414 . - 0 ID=cds-WP_041494053.1;Parent=gene-LDO50_RS14040;Dbxref=GenBank:WP_041494053.1;Name=WP_041494053.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760114.1;locus_tag=LDO50_RS14040;product=S10 family serine carboxypeptidase-like protein;protein_id=WP_041494053.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 3163 4974 . - . ID=gene-LDO50_RS14045;Name=LDO50_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14045;old_locus_tag=BVI1335_220004 NZ_CAJZAO010000135.1 Protein Homology CDS 3163 4974 . - 0 ID=cds-WP_224019806.1;Parent=gene-LDO50_RS14045;Dbxref=GenBank:WP_224019806.1;Name=WP_224019806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409681.1;locus_tag=LDO50_RS14045;product=ExeM/NucH family extracellular endonuclease;protein_id=WP_224019806.1;transl_table=11 NZ_CAJZAO010000135.1 cmsearch riboswitch 5201 5336 . + . ID=id-NZ_CAJZAO010000135.1:5201..5336;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAO010000135.1 RefSeq gene 5467 6477 . + . ID=gene-LDO50_RS14050;Name=LDO50_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14050;old_locus_tag=BVI1335_220006 NZ_CAJZAO010000135.1 Protein Homology CDS 5467 6477 . + 0 ID=cds-WP_034193685.1;Parent=gene-LDO50_RS14050;Dbxref=GenBank:WP_034193685.1;Name=WP_034193685.1;Ontology_term=GO:0006874,GO:0008273;gbkey=CDS;go_function=calcium%2C potassium:sodium antiporter activity|0008273||IEA;go_process=intracellular calcium ion homeostasis|0006874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881283.1;locus_tag=LDO50_RS14050;product=sodium:calcium antiporter;protein_id=WP_034193685.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 6523 7161 . - . ID=gene-LDO50_RS14055;Name=LDO50_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14055;old_locus_tag=BVI1335_220007 NZ_CAJZAO010000135.1 Protein Homology CDS 6523 7161 . - 0 ID=cds-WP_014724373.1;Parent=gene-LDO50_RS14055;Dbxref=GenBank:WP_014724373.1;Name=WP_014724373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724373.1;locus_tag=LDO50_RS14055;product=glutathione S-transferase C-terminal domain-containing protein;protein_id=WP_014724373.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 7303 7632 . + . ID=gene-LDO50_RS14060;Name=LDO50_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14060;old_locus_tag=BVI1335_220008 NZ_CAJZAO010000135.1 Protein Homology CDS 7303 7632 . + 0 ID=cds-WP_046423512.1;Parent=gene-LDO50_RS14060;Dbxref=GenBank:WP_046423512.1;Name=WP_046423512.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881281.1;locus_tag=LDO50_RS14060;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_046423512.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 7679 8047 . + . ID=gene-LDO50_RS14065;Name=LDO50_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14065;old_locus_tag=BVI1335_220009 NZ_CAJZAO010000135.1 Protein Homology CDS 7679 8047 . + 0 ID=cds-WP_011881280.1;Parent=gene-LDO50_RS14065;Dbxref=GenBank:WP_011881280.1;Name=WP_011881280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881280.1;locus_tag=LDO50_RS14065;product=hypothetical protein;protein_id=WP_011881280.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 8271 9665 . + . ID=gene-LDO50_RS14070;Name=LDO50_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14070;old_locus_tag=BVI1335_220010 NZ_CAJZAO010000135.1 Protein Homology CDS 8271 9665 . + 0 ID=cds-WP_059739947.1;Parent=gene-LDO50_RS14070;Dbxref=GenBank:WP_059739947.1;Name=WP_059739947.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479867.1;locus_tag=LDO50_RS14070;product=MFS transporter;protein_id=WP_059739947.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 10243 11127 . + . ID=gene-LDO50_RS14075;Name=LDO50_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14075;old_locus_tag=BVI1335_220011 NZ_CAJZAO010000135.1 Protein Homology CDS 10243 11127 . + 0 ID=cds-WP_175658004.1;Parent=gene-LDO50_RS14075;Dbxref=GenBank:WP_175658004.1;Name=WP_175658004.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724368.1;locus_tag=LDO50_RS14075;product=helix-turn-helix transcriptional regulator;protein_id=WP_175658004.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 11187 11387 . - . ID=gene-LDO50_RS14080;Name=LDO50_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14080;old_locus_tag=BVI1335_220012 NZ_CAJZAO010000135.1 Protein Homology CDS 11187 11387 . - 0 ID=cds-WP_034193691.1;Parent=gene-LDO50_RS14080;Dbxref=GenBank:WP_034193691.1;Name=WP_034193691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749416.1;locus_tag=LDO50_RS14080;product=hypothetical protein;protein_id=WP_034193691.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 11418 12737 . - . ID=gene-LDO50_RS14085;Name=LDO50_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14085;old_locus_tag=BVI1335_220013 NZ_CAJZAO010000135.1 Protein Homology CDS 11418 12737 . - 0 ID=cds-WP_059991171.1;Parent=gene-LDO50_RS14085;Dbxref=GenBank:WP_059991171.1;Name=WP_059991171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404467.1;locus_tag=LDO50_RS14085;product=DUF3422 family protein;protein_id=WP_059991171.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 12898 13773 . + . ID=gene-LDO50_RS14090;Name=LDO50_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14090;old_locus_tag=BVI1335_220014 NZ_CAJZAO010000135.1 Protein Homology CDS 12898 13773 . + 0 ID=cds-WP_011881275.1;Parent=gene-LDO50_RS14090;Dbxref=GenBank:WP_011881275.1;Name=WP_011881275.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397730.1;locus_tag=LDO50_RS14090;product=LysR family transcriptional regulator;protein_id=WP_011881275.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 13804 14370 . - . ID=gene-LDO50_RS14095;Name=LDO50_RS14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14095;old_locus_tag=BVI1335_220015 NZ_CAJZAO010000135.1 Protein Homology CDS 13804 14370 . - 0 ID=cds-WP_014724365.1;Parent=gene-LDO50_RS14095;Dbxref=GenBank:WP_014724365.1;Name=WP_014724365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724365.1;locus_tag=LDO50_RS14095;product=hypothetical protein;protein_id=WP_014724365.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 14503 14838 . - . ID=gene-LDO50_RS14100;Name=LDO50_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14100;old_locus_tag=BVI1335_220016 NZ_CAJZAO010000135.1 Protein Homology CDS 14503 14838 . - 0 ID=cds-WP_041494051.1;Parent=gene-LDO50_RS14100;Dbxref=GenBank:WP_041494051.1;Name=WP_041494051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900465.1;locus_tag=LDO50_RS14100;product=hypothetical protein;protein_id=WP_041494051.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 15596 17317 . - . ID=gene-LDO50_RS14105;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=LDO50_RS14105;old_locus_tag=BVI1335_220018 NZ_CAJZAO010000135.1 Protein Homology CDS 15596 17317 . - 0 ID=cds-WP_224019807.1;Parent=gene-LDO50_RS14105;Dbxref=GenBank:WP_224019807.1;Name=WP_224019807.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762136.1;locus_tag=LDO50_RS14105;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_224019807.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 17684 18184 . - . ID=gene-LDO50_RS14110;Name=LDO50_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14110;old_locus_tag=BVI1335_220019 NZ_CAJZAO010000135.1 Protein Homology CDS 17684 18184 . - 0 ID=cds-WP_011881271.1;Parent=gene-LDO50_RS14110;Dbxref=GenBank:WP_011881271.1;Name=WP_011881271.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749403.1;locus_tag=LDO50_RS14110;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011881271.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 18373 19389 . + . ID=gene-LDO50_RS14115;Name=LDO50_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14115;old_locus_tag=BVI1335_220020 NZ_CAJZAO010000135.1 Protein Homology CDS 18373 19389 . + 0 ID=cds-WP_011881270.1;Parent=gene-LDO50_RS14115;Dbxref=GenBank:WP_011881270.1;Name=WP_011881270.1;Ontology_term=GO:0009310,GO:0008660,GO:0030170;gbkey=CDS;go_function=1-aminocyclopropane-1-carboxylate deaminase activity|0008660||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=amine catabolic process|0009310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099870.1;locus_tag=LDO50_RS14115;product=1-aminocyclopropane-1-carboxylate deaminase;protein_id=WP_011881270.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 19444 22824 . - . ID=gene-LDO50_RS14120;Name=LDO50_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14120;old_locus_tag=BVI1335_220021 NZ_CAJZAO010000135.1 Protein Homology CDS 19444 22824 . - 0 ID=cds-WP_224019808.1;Parent=gene-LDO50_RS14120;Dbxref=GenBank:WP_224019808.1;Name=WP_224019808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881269.1;locus_tag=LDO50_RS14120;product=ATP-binding protein;protein_id=WP_224019808.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 22918 23592 . - . ID=gene-LDO50_RS14125;Name=LDO50_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14125;old_locus_tag=BVI1335_220022 NZ_CAJZAO010000135.1 Protein Homology CDS 22918 23592 . - 0 ID=cds-WP_011881268.1;Parent=gene-LDO50_RS14125;Dbxref=GenBank:WP_011881268.1;Name=WP_011881268.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881268.1;locus_tag=LDO50_RS14125;product=response regulator;protein_id=WP_011881268.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 23927 24115 . - . ID=gene-LDO50_RS14130;Name=LDO50_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14130;old_locus_tag=BVI1335_220024 NZ_CAJZAO010000135.1 Protein Homology CDS 23927 24115 . - 0 ID=cds-WP_085954502.1;Parent=gene-LDO50_RS14130;Dbxref=GenBank:WP_085954502.1;Name=WP_085954502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724358.1;locus_tag=LDO50_RS14130;product=hypothetical protein;protein_id=WP_085954502.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 24232 27297 . - . ID=gene-LDO50_RS14135;Name=LDO50_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14135;old_locus_tag=BVI1335_220025 NZ_CAJZAO010000135.1 Protein Homology CDS 24232 27297 . - 0 ID=cds-WP_034193695.1;Parent=gene-LDO50_RS14135;Dbxref=GenBank:WP_034193695.1;Name=WP_034193695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881267.1;locus_tag=LDO50_RS14135;product=ATP-binding protein;protein_id=WP_034193695.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 27954 28829 . + . ID=gene-LDO50_RS14140;Name=LDO50_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14140;old_locus_tag=BVI1335_220027 NZ_CAJZAO010000135.1 Protein Homology CDS 27954 28829 . + 0 ID=cds-WP_014724356.1;Parent=gene-LDO50_RS14140;Dbxref=GenBank:WP_014724356.1;Name=WP_014724356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365211.1;locus_tag=LDO50_RS14140;product=response regulator;protein_id=WP_014724356.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 28877 29377 . + . ID=gene-LDO50_RS14145;Name=LDO50_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14145;old_locus_tag=BVI1335_220028 NZ_CAJZAO010000135.1 Protein Homology CDS 28877 29377 . + 0 ID=cds-WP_045578308.1;Parent=gene-LDO50_RS14145;Dbxref=GenBank:WP_045578308.1;Name=WP_045578308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749397.1;locus_tag=LDO50_RS14145;product=molybdopterin-dependent oxidoreductase;protein_id=WP_045578308.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 29387 31201 . + . ID=gene-LDO50_RS14150;Name=atsR;gbkey=Gene;gene=atsR;gene_biotype=protein_coding;locus_tag=LDO50_RS14150;old_locus_tag=BVI1335_220029 NZ_CAJZAO010000135.1 Protein Homology CDS 29387 31201 . + 0 ID=cds-WP_041494050.1;Parent=gene-LDO50_RS14150;Dbxref=GenBank:WP_041494050.1;Name=WP_041494050.1;Note=AtsR signifies Adherence and T6SS Regulator.;gbkey=CDS;gene=atsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760899.1;locus_tag=LDO50_RS14150;product=hybrid sensor histidine kinase/response regulator AtsR;protein_id=WP_041494050.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 31219 31638 . - . ID=gene-LDO50_RS14155;Name=LDO50_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14155;old_locus_tag=BVI1335_220030 NZ_CAJZAO010000135.1 Protein Homology CDS 31219 31638 . - 0 ID=cds-WP_014724354.1;Parent=gene-LDO50_RS14155;Dbxref=GenBank:WP_014724354.1;Name=WP_014724354.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255409.1;locus_tag=LDO50_RS14155;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_014724354.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 31649 31975 . - . ID=gene-LDO50_RS14160;Name=LDO50_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14160;old_locus_tag=BVI1335_220031 NZ_CAJZAO010000135.1 Protein Homology CDS 31649 31975 . - 0 ID=cds-WP_011881262.1;Parent=gene-LDO50_RS14160;Dbxref=GenBank:WP_011881262.1;Name=WP_011881262.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485487.1;locus_tag=LDO50_RS14160;product=thioredoxin family protein;protein_id=WP_011881262.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 32229 32561 . + . ID=gene-LDO50_RS14165;Name=LDO50_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14165;old_locus_tag=BVI1335_220032 NZ_CAJZAO010000135.1 Protein Homology CDS 32229 32561 . + 0 ID=cds-WP_011881261.1;Parent=gene-LDO50_RS14165;Dbxref=GenBank:WP_011881261.1;Name=WP_011881261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881261.1;locus_tag=LDO50_RS14165;product=DUF2322 family protein;protein_id=WP_011881261.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 32676 33245 . - . ID=gene-LDO50_RS14170;Name=LDO50_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14170;old_locus_tag=BVI1335_220033 NZ_CAJZAO010000135.1 Protein Homology CDS 32676 33245 . - 0 ID=cds-WP_034193697.1;Parent=gene-LDO50_RS14170;Dbxref=GenBank:WP_034193697.1;Name=WP_034193697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188099.1;locus_tag=LDO50_RS14170;product=hypothetical protein;protein_id=WP_034193697.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 33428 33886 . - . ID=gene-LDO50_RS14175;Name=LDO50_RS14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14175;old_locus_tag=BVI1335_220034 NZ_CAJZAO010000135.1 Protein Homology CDS 33428 33886 . - 0 ID=cds-WP_009691375.1;Parent=gene-LDO50_RS14175;Dbxref=GenBank:WP_009691375.1;Name=WP_009691375.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330690.1;locus_tag=LDO50_RS14175;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_009691375.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 34013 34750 . + . ID=gene-LDO50_RS14180;Name=LDO50_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14180;old_locus_tag=BVI1335_220035 NZ_CAJZAO010000135.1 Protein Homology CDS 34013 34750 . + 0 ID=cds-WP_014724352.1;Parent=gene-LDO50_RS14180;Dbxref=GenBank:WP_014724352.1;Name=WP_014724352.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660066.1;locus_tag=LDO50_RS14180;product=AzlC family ABC transporter permease;protein_id=WP_014724352.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 34740 35042 . + . ID=gene-LDO50_RS14185;Name=LDO50_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14185;old_locus_tag=BVI1335_220036 NZ_CAJZAO010000135.1 Protein Homology CDS 34740 35042 . + 0 ID=cds-WP_011881257.1;Parent=gene-LDO50_RS14185;Dbxref=GenBank:WP_011881257.1;Name=WP_011881257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900507.1;locus_tag=LDO50_RS14185;product=AzlD family protein;protein_id=WP_011881257.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 35200 36021 . - . ID=gene-LDO50_RS14190;Name=LDO50_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14190;old_locus_tag=BVI1335_220037 NZ_CAJZAO010000135.1 Protein Homology CDS 35200 36021 . - 0 ID=cds-WP_224019809.1;Parent=gene-LDO50_RS14190;Dbxref=GenBank:WP_224019809.1;Name=WP_224019809.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749366.1;locus_tag=LDO50_RS14190;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_224019809.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 36091 36558 . - . ID=gene-LDO50_RS14195;Name=LDO50_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14195;old_locus_tag=BVI1335_220038 NZ_CAJZAO010000135.1 Protein Homology CDS 36091 36558 . - 0 ID=cds-WP_011881255.1;Parent=gene-LDO50_RS14195;Dbxref=GenBank:WP_011881255.1;Name=WP_011881255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749365.1;locus_tag=LDO50_RS14195;product=cupin domain-containing protein;protein_id=WP_011881255.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 36690 38042 . - . ID=gene-LDO50_RS14200;Name=LDO50_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14200;old_locus_tag=BVI1335_220039 NZ_CAJZAO010000135.1 Protein Homology CDS 36690 38042 . - 0 ID=cds-WP_011881254.1;Parent=gene-LDO50_RS14200;Dbxref=GenBank:WP_011881254.1;Name=WP_011881254.1;Ontology_term=GO:0019752,GO:0016830,GO:0030170;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749363.1;locus_tag=LDO50_RS14200;product=pyridoxal phosphate-dependent decarboxylase family protein;protein_id=WP_011881254.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 38062 38361 . - . ID=gene-LDO50_RS14205;Name=LDO50_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14205;old_locus_tag=BVI1335_220040 NZ_CAJZAO010000135.1 Protein Homology CDS 38062 38361 . - 0 ID=cds-WP_011881253.1;Parent=gene-LDO50_RS14205;Dbxref=GenBank:WP_011881253.1;Name=WP_011881253.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749362.1;locus_tag=LDO50_RS14205;product=ArsR/SmtB family transcription factor;protein_id=WP_011881253.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 38617 39630 . + . ID=gene-LDO50_RS14210;Name=LDO50_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14210;old_locus_tag=BVI1335_220041 NZ_CAJZAO010000135.1 Protein Homology CDS 38617 39630 . + 0 ID=cds-WP_034193702.1;Parent=gene-LDO50_RS14210;Dbxref=GenBank:WP_034193702.1;Name=WP_034193702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881252.1;locus_tag=LDO50_RS14210;product=hypothetical protein;protein_id=WP_034193702.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 39863 40672 . + . ID=gene-LDO50_RS14215;Name=LDO50_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14215;old_locus_tag=BVI1335_220042 NZ_CAJZAO010000135.1 Protein Homology CDS 39863 40672 . + 0 ID=cds-WP_224019810.1;Parent=gene-LDO50_RS14215;Dbxref=GenBank:WP_224019810.1;Name=WP_224019810.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548463.1;locus_tag=LDO50_RS14215;product=TlpA family protein disulfide reductase;protein_id=WP_224019810.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 40691 41095 . - . ID=gene-LDO50_RS14220;Name=LDO50_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14220;old_locus_tag=BVI1335_220043 NZ_CAJZAO010000135.1 Protein Homology CDS 40691 41095 . - 0 ID=cds-WP_011881250.1;Parent=gene-LDO50_RS14220;Dbxref=GenBank:WP_011881250.1;Name=WP_011881250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756235.1;locus_tag=LDO50_RS14220;product=hypothetical protein;protein_id=WP_011881250.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 41390 42265 . + . ID=gene-LDO50_RS14225;Name=LDO50_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14225;old_locus_tag=BVI1335_220044 NZ_CAJZAO010000135.1 Protein Homology CDS 41390 42265 . + 0 ID=cds-WP_224019811.1;Parent=gene-LDO50_RS14225;Dbxref=GenBank:WP_224019811.1;Name=WP_224019811.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756238.1;locus_tag=LDO50_RS14225;product=mechanosensitive ion channel family protein;protein_id=WP_224019811.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 42445 43482 . - . ID=gene-LDO50_RS14230;Name=LDO50_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14230;old_locus_tag=BVI1335_220045 NZ_CAJZAO010000135.1 Protein Homology CDS 42445 43482 . - 0 ID=cds-WP_059739933.1;Parent=gene-LDO50_RS14230;Dbxref=GenBank:WP_059739933.1;Name=WP_059739933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881248.1;locus_tag=LDO50_RS14230;product=histone deacetylase family protein;protein_id=WP_059739933.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 43607 44095 . + . ID=gene-LDO50_RS14235;Name=LDO50_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14235;old_locus_tag=BVI1335_220046 NZ_CAJZAO010000135.1 Protein Homology CDS 43607 44095 . + 0 ID=cds-WP_059622458.1;Parent=gene-LDO50_RS14235;Dbxref=GenBank:WP_059622458.1;Name=WP_059622458.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365166.1;locus_tag=LDO50_RS14235;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_059622458.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 44156 44476 . + . ID=gene-LDO50_RS14240;Name=LDO50_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14240;old_locus_tag=BVI1335_220047 NZ_CAJZAO010000135.1 Protein Homology CDS 44156 44476 . + 0 ID=cds-WP_059460416.1;Parent=gene-LDO50_RS14240;Dbxref=GenBank:WP_059460416.1;Name=WP_059460416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724346.1;locus_tag=LDO50_RS14240;product=hypothetical protein;protein_id=WP_059460416.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 44886 45083 . + . ID=gene-LDO50_RS14245;Name=LDO50_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14245;old_locus_tag=BVI1335_220050 NZ_CAJZAO010000135.1 Protein Homology CDS 44886 45083 . + 0 ID=cds-WP_011881245.1;Parent=gene-LDO50_RS14245;Dbxref=GenBank:WP_011881245.1;Name=WP_011881245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756243.1;locus_tag=LDO50_RS14245;product=hypothetical protein;protein_id=WP_011881245.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 45080 46477 . + . ID=gene-LDO50_RS14250;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=LDO50_RS14250;old_locus_tag=BVI1335_220049 NZ_CAJZAO010000135.1 Protein Homology CDS 45080 46477 . + 0 ID=cds-WP_014724345.1;Parent=gene-LDO50_RS14250;Dbxref=GenBank:WP_014724345.1;Name=WP_014724345.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548605.1;locus_tag=LDO50_RS14250;product=ATP-dependent RNA helicase DbpA;protein_id=WP_014724345.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 46517 47341 . - . ID=gene-LDO50_RS14255;Name=LDO50_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14255;old_locus_tag=BVI1335_220051 NZ_CAJZAO010000135.1 Protein Homology CDS 46517 47341 . - 0 ID=cds-WP_059474422.1;Parent=gene-LDO50_RS14255;Dbxref=GenBank:WP_059474422.1;Name=WP_059474422.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660029.1;locus_tag=LDO50_RS14255;product=phosphate/phosphite/phosphonate ABC transporter substrate-binding protein;protein_id=WP_059474422.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 47647 48672 . + . ID=gene-LDO50_RS14260;Name=LDO50_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14260;old_locus_tag=BVI1335_220052 NZ_CAJZAO010000135.1 Protein Homology CDS 47647 48672 . + 0 ID=cds-WP_060090887.1;Parent=gene-LDO50_RS14260;Dbxref=GenBank:WP_060090887.1;Name=WP_060090887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356565.1;locus_tag=LDO50_RS14260;product=fatty acid desaturase;protein_id=WP_060090887.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 48662 48883 . - . ID=gene-LDO50_RS14265;Name=LDO50_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14265;old_locus_tag=BVI1335_220053 NZ_CAJZAO010000135.1 GeneMarkS-2+ CDS 48662 48883 . - 0 ID=cds-WP_124259667.1;Parent=gene-LDO50_RS14265;Dbxref=GenBank:WP_124259667.1;Name=WP_124259667.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS14265;product=hypothetical protein;protein_id=WP_124259667.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 48931 50133 . + . ID=gene-LDO50_RS14270;Name=LDO50_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14270;old_locus_tag=BVI1335_220054 NZ_CAJZAO010000135.1 Protein Homology CDS 48931 50133 . + 0 ID=cds-WP_034193707.1;Parent=gene-LDO50_RS14270;Dbxref=GenBank:WP_034193707.1;Name=WP_034193707.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338936.1;locus_tag=LDO50_RS14270;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_034193707.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 50166 51053 . - . ID=gene-LDO50_RS14275;Name=LDO50_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14275;old_locus_tag=BVI1335_220056 NZ_CAJZAO010000135.1 Protein Homology CDS 50166 51053 . - 0 ID=cds-WP_059474424.1;Parent=gene-LDO50_RS14275;Dbxref=GenBank:WP_059474424.1;Name=WP_059474424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881240.1;locus_tag=LDO50_RS14275;product=NmrA family NAD(P)-binding protein;protein_id=WP_059474424.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 51273 52148 . - . ID=gene-LDO50_RS14280;Name=LDO50_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14280;old_locus_tag=BVI1335_220057 NZ_CAJZAO010000135.1 Protein Homology CDS 51273 52148 . - 0 ID=cds-WP_059474425.1;Parent=gene-LDO50_RS14280;Dbxref=GenBank:WP_059474425.1;Name=WP_059474425.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881239.1;locus_tag=LDO50_RS14280;product=AraC family transcriptional regulator;protein_id=WP_059474425.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 52341 52538 . + . ID=gene-LDO50_RS14285;Name=LDO50_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14285;old_locus_tag=BVI1335_220058 NZ_CAJZAO010000135.1 Protein Homology CDS 52341 52538 . + 0 ID=cds-WP_172820416.1;Parent=gene-LDO50_RS14285;Dbxref=GenBank:WP_172820416.1;Name=WP_172820416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756250.1;locus_tag=LDO50_RS14285;product=hypothetical protein;protein_id=WP_172820416.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 52588 53550 . - . ID=gene-LDO50_RS14290;Name=LDO50_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14290;old_locus_tag=BVI1335_220059 NZ_CAJZAO010000135.1 Protein Homology CDS 52588 53550 . - 0 ID=cds-WP_011881237.1;Parent=gene-LDO50_RS14290;Dbxref=GenBank:WP_011881237.1;Name=WP_011881237.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881237.1;locus_tag=LDO50_RS14290;product=LysR family transcriptional regulator;protein_id=WP_011881237.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 53651 55009 . + . ID=gene-LDO50_RS14295;Name=LDO50_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14295;old_locus_tag=BVI1335_220060 NZ_CAJZAO010000135.1 Protein Homology CDS 53651 55009 . + 0 ID=cds-WP_011881236.1;Parent=gene-LDO50_RS14295;Dbxref=GenBank:WP_011881236.1;Name=WP_011881236.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881236.1;locus_tag=LDO50_RS14295;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_011881236.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 55327 55761 . + . ID=gene-LDO50_RS14300;Name=LDO50_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14300;old_locus_tag=BVI1335_220062 NZ_CAJZAO010000135.1 Protein Homology CDS 55327 55761 . + 0 ID=cds-WP_011881235.1;Parent=gene-LDO50_RS14300;Dbxref=GenBank:WP_011881235.1;Name=WP_011881235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756252.1;locus_tag=LDO50_RS14300;product=hypothetical protein;protein_id=WP_011881235.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq pseudogene 56037 56209 . + . ID=gene-LDO50_RS14305;Name=LDO50_RS14305;end_range=56209,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS14305;partial=true;pseudo=true;start_range=.,56037 NZ_CAJZAO010000135.1 Protein Homology CDS 56037 56209 . + 0 ID=cds-LDO50_RS14305;Parent=gene-LDO50_RS14305;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=56209,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365152.1;locus_tag=LDO50_RS14305;partial=true;product=histidine-type phosphatase;pseudo=true;start_range=.,56037;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 56307 56597 . + . ID=gene-LDO50_RS14310;Name=LDO50_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14310;old_locus_tag=BVI1335_220064 NZ_CAJZAO010000135.1 Protein Homology CDS 56307 56597 . + 0 ID=cds-WP_011881233.1;Parent=gene-LDO50_RS14310;Dbxref=GenBank:WP_011881233.1;Name=WP_011881233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881233.1;locus_tag=LDO50_RS14310;product=hypothetical protein;protein_id=WP_011881233.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 57043 58689 . + . ID=gene-LDO50_RS14315;Name=LDO50_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14315;old_locus_tag=BVI1335_220065 NZ_CAJZAO010000135.1 Protein Homology CDS 57043 58689 . + 0 ID=cds-WP_081054248.1;Parent=gene-LDO50_RS14315;Dbxref=GenBank:WP_081054248.1;Name=WP_081054248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660019.1;locus_tag=LDO50_RS14315;product=EAL domain-containing protein;protein_id=WP_081054248.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 58900 60492 . + . ID=gene-LDO50_RS14320;Name=LDO50_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14320;old_locus_tag=BVI1335_220066 NZ_CAJZAO010000135.1 Protein Homology CDS 58900 60492 . + 0 ID=cds-WP_224019812.1;Parent=gene-LDO50_RS14320;Dbxref=GenBank:WP_224019812.1;Name=WP_224019812.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881231.1;locus_tag=LDO50_RS14320;product=PAS domain-containing hybrid sensor histidine kinase/response regulator;protein_id=WP_224019812.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 60631 62997 . + . ID=gene-LDO50_RS14325;Name=LDO50_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14325;old_locus_tag=BVI1335_220067 NZ_CAJZAO010000135.1 Protein Homology CDS 60631 62997 . + 0 ID=cds-WP_224019813.1;Parent=gene-LDO50_RS14325;Dbxref=GenBank:WP_224019813.1;Name=WP_224019813.1;Ontology_term=GO:0000166,GO:0003676,GO:0003887;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleic acid binding|0003676||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365147.1;locus_tag=LDO50_RS14325;product=DNA polymerase II;protein_id=WP_224019813.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 63476 65542 . + . ID=gene-LDO50_RS14330;Name=LDO50_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14330;old_locus_tag=BVI1335_220068 NZ_CAJZAO010000135.1 Protein Homology CDS 63476 65542 . + 0 ID=cds-WP_224019814.1;Parent=gene-LDO50_RS14330;Dbxref=GenBank:WP_224019814.1;Name=WP_224019814.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881229.1;locus_tag=LDO50_RS14330;product=FUSC family protein;protein_id=WP_224019814.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 65539 65763 . + . ID=gene-LDO50_RS14335;Name=LDO50_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14335;old_locus_tag=BVI1335_220069 NZ_CAJZAO010000135.1 Protein Homology CDS 65539 65763 . + 0 ID=cds-WP_011881228.1;Parent=gene-LDO50_RS14335;Dbxref=GenBank:WP_011881228.1;Name=WP_011881228.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894707.1;locus_tag=LDO50_RS14335;product=DUF1656 domain-containing protein;protein_id=WP_011881228.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 65766 66665 . + . ID=gene-LDO50_RS14340;Name=LDO50_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14340;old_locus_tag=BVI1335_220070 NZ_CAJZAO010000135.1 Protein Homology CDS 65766 66665 . + 0 ID=cds-WP_011881227.1;Parent=gene-LDO50_RS14340;Dbxref=GenBank:WP_011881227.1;Name=WP_011881227.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009898285.1;locus_tag=LDO50_RS14340;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_011881227.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 66659 68071 . + . ID=gene-LDO50_RS14345;Name=LDO50_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14345;old_locus_tag=BVI1335_220071 NZ_CAJZAO010000135.1 Protein Homology CDS 66659 68071 . + 0 ID=cds-WP_059736073.1;Parent=gene-LDO50_RS14345;Dbxref=GenBank:WP_059736073.1;Name=WP_059736073.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881226.1;locus_tag=LDO50_RS14345;product=efflux transporter outer membrane subunit;protein_id=WP_059736073.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 68068 69105 . + . ID=gene-LDO50_RS14350;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=LDO50_RS14350;old_locus_tag=BVI1335_220072 NZ_CAJZAO010000135.1 Protein Homology CDS 68068 69105 . + 0 ID=cds-WP_011881225.1;Parent=gene-LDO50_RS14350;Dbxref=GenBank:WP_011881225.1;Name=WP_011881225.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cynR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724329.1;locus_tag=LDO50_RS14350;product=transcriptional regulator CynR;protein_id=WP_011881225.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 69477 69788 . - . ID=gene-LDO50_RS14355;Name=LDO50_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14355 NZ_CAJZAO010000135.1 GeneMarkS-2+ CDS 69477 69788 . - 0 ID=cds-WP_126220714.1;Parent=gene-LDO50_RS14355;Dbxref=GenBank:WP_126220714.1;Name=WP_126220714.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS14355;product=hypothetical protein;protein_id=WP_126220714.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 69845 70807 . + . ID=gene-LDO50_RS14360;Name=LDO50_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14360;old_locus_tag=BVI1335_220074 NZ_CAJZAO010000135.1 Protein Homology CDS 69845 70807 . + 0 ID=cds-WP_014724326.1;Parent=gene-LDO50_RS14360;Dbxref=GenBank:WP_014724326.1;Name=WP_014724326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724326.1;locus_tag=LDO50_RS14360;product=LysR family transcriptional regulator;protein_id=WP_014724326.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 70898 71212 . + . ID=gene-LDO50_RS14365;Name=LDO50_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14365;old_locus_tag=BVI1335_220075 NZ_CAJZAO010000135.1 Protein Homology CDS 70898 71212 . + 0 ID=cds-WP_059561736.1;Parent=gene-LDO50_RS14365;Dbxref=GenBank:WP_059561736.1;Name=WP_059561736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881223.1;locus_tag=LDO50_RS14365;product=DUF4148 domain-containing protein;protein_id=WP_059561736.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 71348 72451 . + . ID=gene-LDO50_RS14370;Name=LDO50_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14370;old_locus_tag=BVI1335_220076 NZ_CAJZAO010000135.1 Protein Homology CDS 71348 72451 . + 0 ID=cds-WP_059474433.1;Parent=gene-LDO50_RS14370;Dbxref=GenBank:WP_059474433.1;Name=WP_059474433.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881222.1;locus_tag=LDO50_RS14370;product=J domain-containing protein;protein_id=WP_059474433.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 72493 73398 . - . ID=gene-LDO50_RS14375;Name=LDO50_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14375;old_locus_tag=BVI1335_220077 NZ_CAJZAO010000135.1 Protein Homology CDS 72493 73398 . - 0 ID=cds-WP_011881221.1;Parent=gene-LDO50_RS14375;Dbxref=GenBank:WP_011881221.1;Name=WP_011881221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365135.1;locus_tag=LDO50_RS14375;product=LysR family transcriptional regulator;protein_id=WP_011881221.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 73510 74754 . - . ID=gene-LDO50_RS14380;Name=LDO50_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14380;old_locus_tag=BVI1335_220078 NZ_CAJZAO010000135.1 Protein Homology CDS 73510 74754 . - 0 ID=cds-WP_011881220.1;Parent=gene-LDO50_RS14380;Dbxref=GenBank:WP_011881220.1;Name=WP_011881220.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483083.1;locus_tag=LDO50_RS14380;product=acyl-CoA dehydrogenase family protein;protein_id=WP_011881220.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 74827 75591 . - . ID=gene-LDO50_RS14385;Name=LDO50_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14385;old_locus_tag=BVI1335_220079 NZ_CAJZAO010000135.1 Protein Homology CDS 74827 75591 . - 0 ID=cds-WP_011881219.1;Parent=gene-LDO50_RS14385;Dbxref=GenBank:WP_011881219.1;Name=WP_011881219.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014206877.1;locus_tag=LDO50_RS14385;product=SDR family oxidoreductase;protein_id=WP_011881219.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 75650 76681 . - . ID=gene-LDO50_RS14390;Name=LDO50_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14390;old_locus_tag=BVI1335_220080 NZ_CAJZAO010000135.1 Protein Homology CDS 75650 76681 . - 0 ID=cds-WP_034193721.1;Parent=gene-LDO50_RS14390;Dbxref=GenBank:WP_034193721.1;Name=WP_034193721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365131.1;locus_tag=LDO50_RS14390;product=phosphotransferase;protein_id=WP_034193721.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 76702 77376 . - . ID=gene-LDO50_RS14395;Name=LDO50_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14395;old_locus_tag=BVI1335_220081 NZ_CAJZAO010000135.1 Protein Homology CDS 76702 77376 . - 0 ID=cds-WP_011881217.1;Parent=gene-LDO50_RS14395;Dbxref=GenBank:WP_011881217.1;Name=WP_011881217.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881217.1;locus_tag=LDO50_RS14395;product=histidine phosphatase family protein;protein_id=WP_011881217.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 77577 77732 . + . ID=gene-LDO50_RS14400;Name=LDO50_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14400;old_locus_tag=BVI1335_220082 NZ_CAJZAO010000135.1 Protein Homology CDS 77577 77732 . + 0 ID=cds-WP_011881216.1;Parent=gene-LDO50_RS14400;Dbxref=GenBank:WP_011881216.1;Name=WP_011881216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397610.1;locus_tag=LDO50_RS14400;product=DUF3309 family protein;protein_id=WP_011881216.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 77861 79795 . - . ID=gene-LDO50_RS14405;Name=LDO50_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14405;old_locus_tag=BVI1335_220083 NZ_CAJZAO010000135.1 Protein Homology CDS 77861 79795 . - 0 ID=cds-WP_224019815.1;Parent=gene-LDO50_RS14405;Dbxref=GenBank:WP_224019815.1;Name=WP_224019815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404561.1;locus_tag=LDO50_RS14405;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_224019815.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 80121 81326 . - . ID=gene-LDO50_RS14410;Name=LDO50_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14410;old_locus_tag=BVI1335_220084 NZ_CAJZAO010000135.1 Protein Homology CDS 80121 81326 . - 0 ID=cds-WP_224019816.1;Parent=gene-LDO50_RS14410;Dbxref=GenBank:WP_224019816.1;Name=WP_224019816.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659992.1;locus_tag=LDO50_RS14410;product=MFS transporter;protein_id=WP_224019816.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 81334 81519 . - . ID=gene-LDO50_RS14415;Name=LDO50_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14415;old_locus_tag=BVI1335_220085 NZ_CAJZAO010000135.1 Protein Homology CDS 81334 81519 . - 0 ID=cds-WP_011881213.1;Parent=gene-LDO50_RS14415;Dbxref=GenBank:WP_011881213.1;Name=WP_011881213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338820.1;locus_tag=LDO50_RS14415;product=DUF1289 domain-containing protein;protein_id=WP_011881213.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 81522 82826 . - . ID=gene-LDO50_RS14420;Name=dmeF;gbkey=Gene;gene=dmeF;gene_biotype=protein_coding;locus_tag=LDO50_RS14420;old_locus_tag=BVI1335_220086 NZ_CAJZAO010000135.1 Protein Homology CDS 81522 82826 . - 0 ID=cds-WP_046426060.1;Parent=gene-LDO50_RS14420;Dbxref=GenBank:WP_046426060.1;Name=WP_046426060.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=dmeF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724316.1;locus_tag=LDO50_RS14420;product=CDF family Co(II)/Ni(II) efflux transporter DmeF;protein_id=WP_046426060.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 82838 83110 . - . ID=gene-LDO50_RS14425;Name=LDO50_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14425;old_locus_tag=BVI1335_220087 NZ_CAJZAO010000135.1 Protein Homology CDS 82838 83110 . - 0 ID=cds-WP_011881211.1;Parent=gene-LDO50_RS14425;Dbxref=GenBank:WP_011881211.1;Name=WP_011881211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009941095.1;locus_tag=LDO50_RS14425;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_011881211.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 83283 84260 . + . ID=gene-LDO50_RS14430;Name=LDO50_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14430;old_locus_tag=BVI1335_220088 NZ_CAJZAO010000135.1 Protein Homology CDS 83283 84260 . + 0 ID=cds-WP_175948982.1;Parent=gene-LDO50_RS14430;Dbxref=GenBank:WP_175948982.1;Name=WP_175948982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004539585.1;locus_tag=LDO50_RS14430;product=chromate resistance protein ChrB domain-containing protein;protein_id=WP_175948982.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 84257 85435 . + . ID=gene-LDO50_RS14435;Name=LDO50_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14435;old_locus_tag=BVI1335_220089 NZ_CAJZAO010000135.1 Protein Homology CDS 84257 85435 . + 0 ID=cds-WP_069263345.1;Parent=gene-LDO50_RS14435;Dbxref=GenBank:WP_069263345.1;Name=WP_069263345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009898219.1;locus_tag=LDO50_RS14435;product=chromate transporter;protein_id=WP_069263345.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 85556 85876 . - . ID=gene-LDO50_RS14440;Name=LDO50_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14440;old_locus_tag=BVI1335_220090 NZ_CAJZAO010000135.1 Protein Homology CDS 85556 85876 . - 0 ID=cds-WP_011881208.1;Parent=gene-LDO50_RS14440;Dbxref=GenBank:WP_011881208.1;Name=WP_011881208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545695.1;locus_tag=LDO50_RS14440;product=DUF4148 domain-containing protein;protein_id=WP_011881208.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 86090 86548 . - . ID=gene-LDO50_RS14445;Name=LDO50_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14445;old_locus_tag=BVI1335_220091 NZ_CAJZAO010000135.1 Protein Homology CDS 86090 86548 . - 0 ID=cds-WP_034193727.1;Parent=gene-LDO50_RS14445;Dbxref=GenBank:WP_034193727.1;Name=WP_034193727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372196.1;locus_tag=LDO50_RS14445;product=MEKHLA domain-containing protein;protein_id=WP_034193727.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 86767 88065 . - . ID=gene-LDO50_RS14450;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=LDO50_RS14450;old_locus_tag=BVI1335_220093 NZ_CAJZAO010000135.1 Protein Homology CDS 86767 88065 . - 0 ID=cds-WP_224019817.1;Parent=gene-LDO50_RS14450;Dbxref=GenBank:WP_224019817.1;Name=WP_224019817.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881207.1;locus_tag=LDO50_RS14450;product=threonine--tRNA ligase;protein_id=WP_224019817.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 89182 91116 . + . ID=gene-LDO50_RS14455;Name=LDO50_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14455;old_locus_tag=BVI1335_220095 NZ_CAJZAO010000135.1 Protein Homology CDS 89182 91116 . + 0 ID=cds-WP_059567986.1;Parent=gene-LDO50_RS14455;Dbxref=GenBank:WP_059567986.1;Name=WP_059567986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724309.1;locus_tag=LDO50_RS14455;product=glycosyl transferase family protein;protein_id=WP_059567986.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 91118 93103 . + . ID=gene-LDO50_RS14460;Name=LDO50_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14460;old_locus_tag=BVI1335_220096 NZ_CAJZAO010000135.1 Protein Homology CDS 91118 93103 . + 0 ID=cds-WP_224019818.1;Parent=gene-LDO50_RS14460;Dbxref=GenBank:WP_224019818.1;Name=WP_224019818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724308.1;locus_tag=LDO50_RS14460;product=NfrA family protein;protein_id=WP_224019818.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 93154 94374 . + . ID=gene-LDO50_RS14465;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=LDO50_RS14465;old_locus_tag=BVI1335_220097 NZ_CAJZAO010000135.1 Protein Homology CDS 93154 94374 . + 0 ID=cds-WP_224019819.1;Parent=gene-LDO50_RS14465;Dbxref=GenBank:WP_224019819.1;Name=WP_224019819.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724307.1;locus_tag=LDO50_RS14465;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_224019819.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 94582 95199 . + . ID=gene-LDO50_RS14470;Name=LDO50_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14470;old_locus_tag=BVI1335_220098 NZ_CAJZAO010000135.1 Protein Homology CDS 94582 95199 . + 0 ID=cds-WP_011881202.1;Parent=gene-LDO50_RS14470;Dbxref=GenBank:WP_011881202.1;Name=WP_011881202.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339114.1;locus_tag=LDO50_RS14470;product=glycine zipper 2TM domain-containing protein;protein_id=WP_011881202.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 95351 96265 . - . ID=gene-LDO50_RS14475;Name=LDO50_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14475;old_locus_tag=BVI1335_220099 NZ_CAJZAO010000135.1 Protein Homology CDS 95351 96265 . - 0 ID=cds-WP_014724305.1;Parent=gene-LDO50_RS14475;Dbxref=GenBank:WP_014724305.1;Name=WP_014724305.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724305.1;locus_tag=LDO50_RS14475;product=LysR family transcriptional regulator;protein_id=WP_014724305.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 96520 97302 . + . ID=gene-LDO50_RS14480;Name=LDO50_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14480;old_locus_tag=BVI1335_220100 NZ_CAJZAO010000135.1 Protein Homology CDS 96520 97302 . + 0 ID=cds-WP_059462813.1;Parent=gene-LDO50_RS14480;Dbxref=GenBank:WP_059462813.1;Name=WP_059462813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877371.1;locus_tag=LDO50_RS14480;product=5-oxoprolinase subunit PxpA;protein_id=WP_059462813.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 97319 97561 . + . ID=gene-LDO50_RS14485;Name=LDO50_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14485;old_locus_tag=BVI1335_220101 NZ_CAJZAO010000135.1 Protein Homology CDS 97319 97561 . + 0 ID=cds-WP_034193784.1;Parent=gene-LDO50_RS14485;Dbxref=GenBank:WP_034193784.1;Name=WP_034193784.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187650.1;locus_tag=LDO50_RS14485;product=acetyl-CoA carboxylase;protein_id=WP_034193784.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 97566 99029 . + . ID=gene-LDO50_RS14490;Name=LDO50_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14490;old_locus_tag=BVI1335_220102 NZ_CAJZAO010000135.1 Protein Homology CDS 97566 99029 . + 0 ID=cds-WP_059461522.1;Parent=gene-LDO50_RS14490;Dbxref=GenBank:WP_059461522.1;Name=WP_059461522.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881198.1;locus_tag=LDO50_RS14490;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_059461522.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 99026 99901 . + . ID=gene-LDO50_RS14495;Name=LDO50_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14495;old_locus_tag=BVI1335_220103 NZ_CAJZAO010000135.1 Protein Homology CDS 99026 99901 . + 0 ID=cds-WP_224019820.1;Parent=gene-LDO50_RS14495;Dbxref=GenBank:WP_224019820.1;Name=WP_224019820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010111384.1;locus_tag=LDO50_RS14495;product=5-oxoprolinase subunit B family protein;protein_id=WP_224019820.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 99891 100886 . + . ID=gene-LDO50_RS14500;Name=LDO50_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14500;old_locus_tag=BVI1335_220104 NZ_CAJZAO010000135.1 Protein Homology CDS 99891 100886 . + 0 ID=cds-WP_059455844.1;Parent=gene-LDO50_RS14500;Dbxref=GenBank:WP_059455844.1;Name=WP_059455844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881196.1;locus_tag=LDO50_RS14500;product=biotin-dependent carboxyltransferase family protein;protein_id=WP_059455844.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 101080 102435 . + . ID=gene-LDO50_RS14505;Name=LDO50_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14505;old_locus_tag=BVI1335_220105 NZ_CAJZAO010000135.1 Protein Homology CDS 101080 102435 . + 0 ID=cds-WP_224019821.1;Parent=gene-LDO50_RS14505;Dbxref=GenBank:WP_224019821.1;Name=WP_224019821.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881195.1;locus_tag=LDO50_RS14505;product=purine-cytosine permease family protein;protein_id=WP_224019821.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 102853 103359 . + . ID=gene-LDO50_RS14515;Name=LDO50_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14515;old_locus_tag=BVI1335_220106 NZ_CAJZAO010000135.1 Protein Homology CDS 102853 103359 . + 0 ID=cds-WP_059474438.1;Parent=gene-LDO50_RS14515;Dbxref=GenBank:WP_059474438.1;Name=WP_059474438.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758433.1;locus_tag=LDO50_RS14515;product=GNAT family N-acetyltransferase;protein_id=WP_059474438.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq pseudogene 103399 103692 . - . ID=gene-LDO50_RS14520;Name=LDO50_RS14520;end_range=103692,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS14520;old_locus_tag=BVI1335_220107;partial=true;pseudo=true NZ_CAJZAO010000135.1 Protein Homology CDS 103399 103692 . - 0 ID=cds-LDO50_RS14520;Parent=gene-LDO50_RS14520;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=103692,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485020.1;locus_tag=LDO50_RS14520;partial=true;product=endopolygalacturonase;pseudo=true;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 104207 105565 . + . ID=gene-LDO50_RS14525;Name=LDO50_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14525;old_locus_tag=BVI1335_220108 NZ_CAJZAO010000135.1 Protein Homology CDS 104207 105565 . + 0 ID=cds-WP_011881192.1;Parent=gene-LDO50_RS14525;Dbxref=GenBank:WP_011881192.1;Name=WP_011881192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553920.1;locus_tag=LDO50_RS14525;product=aspartate aminotransferase family protein;protein_id=WP_011881192.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 105800 106417 . - . ID=gene-LDO50_RS14530;Name=LDO50_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14530;old_locus_tag=BVI1335_220109 NZ_CAJZAO010000135.1 Protein Homology CDS 105800 106417 . - 0 ID=cds-WP_059561685.1;Parent=gene-LDO50_RS14530;Dbxref=GenBank:WP_059561685.1;Name=WP_059561685.1;Ontology_term=GO:0003677,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758425.1;locus_tag=LDO50_RS14530;product=3'-5' exonuclease;protein_id=WP_059561685.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 106631 108355 . - . ID=gene-LDO50_RS14535;Name=LDO50_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14535;old_locus_tag=BVI1335_220110 NZ_CAJZAO010000135.1 Protein Homology CDS 106631 108355 . - 0 ID=cds-WP_155632089.1;Parent=gene-LDO50_RS14535;Dbxref=GenBank:WP_155632089.1;Name=WP_155632089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339108.1;locus_tag=LDO50_RS14535;product=tannase/feruloyl esterase family alpha/beta hydrolase;protein_id=WP_155632089.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 108384 109523 . - . ID=gene-LDO50_RS14540;Name=LDO50_RS14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14540;old_locus_tag=BVI1335_220111 NZ_CAJZAO010000135.1 Protein Homology CDS 108384 109523 . - 0 ID=cds-WP_011881189.1;Parent=gene-LDO50_RS14540;Dbxref=GenBank:WP_011881189.1;Name=WP_011881189.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397484.1;locus_tag=LDO50_RS14540;product=porin;protein_id=WP_011881189.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 109591 110796 . - . ID=gene-LDO50_RS14545;Name=mhpT;gbkey=Gene;gene=mhpT;gene_biotype=protein_coding;locus_tag=LDO50_RS14545;old_locus_tag=BVI1335_220112 NZ_CAJZAO010000135.1 Protein Homology CDS 109591 110796 . - 0 ID=cds-WP_011881188.1;Parent=gene-LDO50_RS14545;Dbxref=GenBank:WP_011881188.1;Name=WP_011881188.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mhpT;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004528059.1;locus_tag=LDO50_RS14545;product=3-(3-hydroxy-phenyl)propionate transporter MhpT;protein_id=WP_011881188.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 111248 111742 . - . ID=gene-LDO50_RS14550;Name=LDO50_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14550;old_locus_tag=BVI1335_220114 NZ_CAJZAO010000135.1 Protein Homology CDS 111248 111742 . - 0 ID=cds-WP_011881187.1;Parent=gene-LDO50_RS14550;Dbxref=GenBank:WP_011881187.1;Name=WP_011881187.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881187.1;locus_tag=LDO50_RS14550;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_011881187.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq pseudogene 111814 111969 . + . ID=gene-LDO50_RS14555;Name=LDO50_RS14555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS14555;partial=true;pseudo=true;start_range=.,111814 NZ_CAJZAO010000135.1 Protein Homology CDS 111814 111969 . + 0 ID=cds-LDO50_RS14555;Parent=gene-LDO50_RS14555;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548203.1;locus_tag=LDO50_RS14555;partial=true;product=RNA polymerase subunit sigma-24;pseudo=true;start_range=.,111814;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 112253 114013 . - . ID=gene-LDO50_RS14560;Name=LDO50_RS14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14560;old_locus_tag=BVI1335_220115 NZ_CAJZAO010000135.1 Protein Homology CDS 112253 114013 . - 0 ID=cds-WP_045578341.1;Parent=gene-LDO50_RS14560;Dbxref=GenBank:WP_045578341.1;Name=WP_045578341.1;Ontology_term=GO:0006631,GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881186.1;locus_tag=LDO50_RS14560;product=acyl-CoA dehydrogenase family protein;protein_id=WP_045578341.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 114024 115928 . - . ID=gene-LDO50_RS14565;Name=LDO50_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14565;old_locus_tag=BVI1335_220116 NZ_CAJZAO010000135.1 Protein Homology CDS 114024 115928 . - 0 ID=cds-WP_224019822.1;Parent=gene-LDO50_RS14565;Dbxref=GenBank:WP_224019822.1;Name=WP_224019822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724290.1;locus_tag=LDO50_RS14565;product=feruloyl-CoA synthase;protein_id=WP_224019822.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 116028 117479 . - . ID=gene-LDO50_RS14570;Name=LDO50_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14570;old_locus_tag=BVI1335_220117 NZ_CAJZAO010000135.1 Protein Homology CDS 116028 117479 . - 0 ID=cds-WP_011881184.1;Parent=gene-LDO50_RS14570;Dbxref=GenBank:WP_011881184.1;Name=WP_011881184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724289.1;locus_tag=LDO50_RS14570;product=aldehyde dehydrogenase;protein_id=WP_011881184.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 117513 118340 . - . ID=gene-LDO50_RS14575;Name=LDO50_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14575;old_locus_tag=BVI1335_220118 NZ_CAJZAO010000135.1 Protein Homology CDS 117513 118340 . - 0 ID=cds-WP_014724288.1;Parent=gene-LDO50_RS14575;Dbxref=GenBank:WP_014724288.1;Name=WP_014724288.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009933465.1;locus_tag=LDO50_RS14575;product=p-hydroxycinnamoyl CoA hydratase/lyase;protein_id=WP_014724288.1;transl_table=11 NZ_CAJZAO010000135.1 RefSeq pseudogene 118510 119081 . + . ID=gene-LDO50_RS14580;Name=LDO50_RS14580;end_range=119081,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS14580;old_locus_tag=BVI1335_220119;partial=true;pseudo=true NZ_CAJZAO010000135.1 Protein Homology CDS 118510 119081 . + 0 ID=cds-LDO50_RS14580;Parent=gene-LDO50_RS14580;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0016787,GO:0046872;end_range=119081,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881182.1;locus_tag=LDO50_RS14580;partial=true;product=amidohydrolase family protein;pseudo=true;transl_table=11 NZ_CAJZAO010000135.1 RefSeq gene 119092 119356 . + . ID=gene-LDO50_RS31535;Name=LDO50_RS31535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31535;old_locus_tag=BVI1335_220120;partial=true;start_range=.,119092 NZ_CAJZAO010000135.1 Protein Homology CDS 119092 119356 . + 1 ID=cds-WP_443797776.1;Parent=gene-LDO50_RS31535;Dbxref=GenBank:WP_443797776.1;Name=WP_443797776.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881182.1;locus_tag=LDO50_RS31535;partial=true;product=amidohydrolase family protein;protein_id=WP_443797776.1;start_range=.,119092;transl_table=11 ##sequence-region NZ_CAJZAO010000136.1 1 9523 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000136.1 RefSeq region 1 9523 . + . ID=NZ_CAJZAO010000136.1:1..9523;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_220 NZ_CAJZAO010000136.1 RefSeq gene 1 421 . + . ID=gene-LDO50_RS14585;Name=LDO50_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14585;old_locus_tag=BVI1335_2200001;partial=true;start_range=.,1 NZ_CAJZAO010000136.1 Protein Homology CDS 1 421 . + 1 ID=cds-WP_224019823.1;Parent=gene-LDO50_RS14585;Dbxref=GenBank:WP_224019823.1;Name=WP_224019823.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750642.1;locus_tag=LDO50_RS14585;partial=true;product=MFS transporter;protein_id=WP_224019823.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000136.1 RefSeq gene 848 1543 . + . ID=gene-LDO50_RS14590;Name=LDO50_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14590;old_locus_tag=BVI1335_2200002 NZ_CAJZAO010000136.1 Protein Homology CDS 848 1543 . + 0 ID=cds-WP_041494238.1;Parent=gene-LDO50_RS14590;Dbxref=GenBank:WP_041494238.1;Name=WP_041494238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750643.1;locus_tag=LDO50_RS14590;product=phosphatase PAP2 family protein;protein_id=WP_041494238.1;transl_table=11 NZ_CAJZAO010000136.1 RefSeq gene 1836 2906 . - . ID=gene-LDO50_RS14595;Name=LDO50_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14595;old_locus_tag=BVI1335_2200004 NZ_CAJZAO010000136.1 Protein Homology CDS 1836 2906 . - 0 ID=cds-WP_011880995.1;Parent=gene-LDO50_RS14595;Dbxref=GenBank:WP_011880995.1;Name=WP_011880995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367024.1;locus_tag=LDO50_RS14595;product=rhodanese-like domain-containing protein;protein_id=WP_011880995.1;transl_table=11 NZ_CAJZAO010000136.1 RefSeq gene 3119 3395 . + . ID=gene-LDO50_RS31070;Name=LDO50_RS31070;end_range=3395,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31070;partial=true NZ_CAJZAO010000136.1 Protein Homology CDS 3119 3395 . + 0 ID=cds-WP_372586099.1;Parent=gene-LDO50_RS31070;Dbxref=GenBank:WP_372586099.1;Name=WP_372586099.1;Ontology_term=GO:0006355,GO:0003700;end_range=3395,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724140.1;locus_tag=LDO50_RS31070;partial=true;product=LysR family transcriptional regulator;protein_id=WP_372586099.1;transl_table=11 NZ_CAJZAO010000136.1 RefSeq gene 3406 3963 . + . ID=gene-LDO50_RS31075;Name=LDO50_RS31075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31075;old_locus_tag=BVI1335_2200006;partial=true;start_range=.,3406 NZ_CAJZAO010000136.1 Protein Homology CDS 3406 3963 . + 0 ID=cds-WP_443797777.1;Parent=gene-LDO50_RS31075;Dbxref=GenBank:WP_443797777.1;Name=WP_443797777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724140.1;locus_tag=LDO50_RS31075;partial=true;product=LysR substrate-binding domain-containing protein;protein_id=WP_443797777.1;start_range=.,3406;transl_table=11 NZ_CAJZAO010000136.1 RefSeq gene 4069 5082 . - . ID=gene-LDO50_RS14605;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=LDO50_RS14605;old_locus_tag=BVI1335_2200007 NZ_CAJZAO010000136.1 Protein Homology CDS 4069 5082 . - 0 ID=cds-WP_224019824.1;Parent=gene-LDO50_RS14605;Dbxref=GenBank:WP_224019824.1;Name=WP_224019824.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880997.1;locus_tag=LDO50_RS14605;product=low-specificity L-threonine aldolase;protein_id=WP_224019824.1;transl_table=11 NZ_CAJZAO010000136.1 RefSeq gene 5473 6894 . + . ID=gene-LDO50_RS14610;Name=LDO50_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14610;old_locus_tag=BVI1335_2200008 NZ_CAJZAO010000136.1 Protein Homology CDS 5473 6894 . + 0 ID=cds-WP_060081813.1;Parent=gene-LDO50_RS14610;Dbxref=GenBank:WP_060081813.1;Name=WP_060081813.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900865.1;locus_tag=LDO50_RS14610;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_060081813.1;transl_table=11 NZ_CAJZAO010000136.1 RefSeq gene 6923 7930 . + . ID=gene-LDO50_RS14615;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=LDO50_RS14615;old_locus_tag=BVI1335_2200009 NZ_CAJZAO010000136.1 Protein Homology CDS 6923 7930 . + 0 ID=cds-WP_011880999.1;Parent=gene-LDO50_RS14615;Dbxref=GenBank:WP_011880999.1;Name=WP_011880999.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548943.1;locus_tag=LDO50_RS14615;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_011880999.1;transl_table=11 NZ_CAJZAO010000136.1 RefSeq gene 7902 8081 . + . ID=gene-LDO50_RS14620;Name=LDO50_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14620;old_locus_tag=BVI1335_2200010 NZ_CAJZAO010000136.1 Protein Homology CDS 7902 8081 . + 0 ID=cds-WP_011881000.1;Parent=gene-LDO50_RS14620;Dbxref=GenBank:WP_011881000.1;Name=WP_011881000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493604.1;locus_tag=LDO50_RS14620;product=hypothetical protein;protein_id=WP_011881000.1;transl_table=11 NZ_CAJZAO010000136.1 RefSeq gene 8266 8721 . - . ID=gene-LDO50_RS14625;Name=LDO50_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14625;old_locus_tag=BVI1335_2200011 NZ_CAJZAO010000136.1 Protein Homology CDS 8266 8721 . - 0 ID=cds-WP_106919422.1;Parent=gene-LDO50_RS14625;Dbxref=GenBank:WP_106919422.1;Name=WP_106919422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013212276.1;locus_tag=LDO50_RS14625;product=TIGR00725 family protein;protein_id=WP_106919422.1;transl_table=11 NZ_CAJZAO010000136.1 RefSeq gene 8792 9328 . - . ID=gene-LDO50_RS14630;Name=LDO50_RS14630;end_range=9328,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14630;old_locus_tag=BVI1335_2200012;partial=true NZ_CAJZAO010000136.1 Protein Homology CDS 8792 9328 . - 0 ID=cds-WP_443797778.1;Parent=gene-LDO50_RS14630;Dbxref=GenBank:WP_443797778.1;Name=WP_443797778.1;Ontology_term=GO:0055085,GO:0016020;end_range=9328,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694880.1;locus_tag=LDO50_RS14630;partial=true;product=ABC transporter permease subunit;protein_id=WP_443797778.1;transl_table=11 NZ_CAJZAO010000136.1 RefSeq pseudogene 9339 9523 . - . ID=gene-LDO50_RS31540;Name=LDO50_RS31540;end_range=9523,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31540;old_locus_tag=BVI1335_2200013;partial=true;pseudo=true;start_range=.,9339 NZ_CAJZAO010000136.1 Protein Homology CDS 9339 9523 . - 2 ID=cds-LDO50_RS31540;Parent=gene-LDO50_RS31540;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=9523,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004549552.1;locus_tag=LDO50_RS31540;partial=true;product=ABC transporter permease;pseudo=true;start_range=.,9339;transl_table=11 ##sequence-region NZ_CAJZAO010000137.1 1 3815 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000137.1 RefSeq region 1 3815 . + . ID=NZ_CAJZAO010000137.1:1..3815;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_221 NZ_CAJZAO010000137.1 RefSeq gene 1 240 . + . ID=gene-LDO50_RS14635;Name=LDO50_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14635;old_locus_tag=BVI1335_2210001;partial=true;start_range=.,1 NZ_CAJZAO010000137.1 Protein Homology CDS 1 240 . + 0 ID=cds-WP_224019825.1;Parent=gene-LDO50_RS14635;Dbxref=GenBank:WP_224019825.1;Name=WP_224019825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600251.1;locus_tag=LDO50_RS14635;partial=true;product=hypothetical protein;protein_id=WP_224019825.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000137.1 RefSeq gene 325 1464 . + . ID=gene-LDO50_RS14640;Name=LDO50_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14640;old_locus_tag=BVI1335_2210002 NZ_CAJZAO010000137.1 Protein Homology CDS 325 1464 . + 0 ID=cds-WP_011882824.1;Parent=gene-LDO50_RS14640;Dbxref=GenBank:WP_011882824.1;Name=WP_011882824.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734190.1;locus_tag=LDO50_RS14640;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_011882824.1;transl_table=11 NZ_CAJZAO010000137.1 RefSeq gene 1585 3237 . - . ID=gene-LDO50_RS14645;Name=LDO50_RS14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14645;old_locus_tag=BVI1335_2210003 NZ_CAJZAO010000137.1 Protein Homology CDS 1585 3237 . - 0 ID=cds-WP_212167293.1;Parent=gene-LDO50_RS14645;Dbxref=GenBank:WP_212167293.1;Name=WP_212167293.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254845.1;locus_tag=LDO50_RS14645;product=acyl-CoA dehydrogenase family protein;protein_id=WP_212167293.1;transl_table=11 NZ_CAJZAO010000137.1 RefSeq gene 3326 3815 . + . ID=gene-LDO50_RS14650;Name=LDO50_RS14650;end_range=3815,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14650;partial=true NZ_CAJZAO010000137.1 Protein Homology CDS 3326 3815 . + 0 ID=cds-WP_224019826.1;Parent=gene-LDO50_RS14650;Dbxref=GenBank:WP_224019826.1;Name=WP_224019826.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;end_range=3815,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212482.1;locus_tag=LDO50_RS14650;partial=true;product=TetR/AcrR family transcriptional regulator;protein_id=WP_224019826.1;transl_table=11 ##sequence-region NZ_CAJZAO010000138.1 1 16978 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000138.1 RefSeq region 1 16978 . + . ID=NZ_CAJZAO010000138.1:1..16978;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_222 NZ_CAJZAO010000138.1 RefSeq gene 187 783 . + . ID=gene-LDO50_RS14655;Name=LDO50_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14655;old_locus_tag=BVI1335_2220001 NZ_CAJZAO010000138.1 Protein Homology CDS 187 783 . + 0 ID=cds-WP_014722373.1;Parent=gene-LDO50_RS14655;Dbxref=GenBank:WP_014722373.1;Name=WP_014722373.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0016491,GO:0050136,GO:0050446;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,azobenzene reductase (NADP+) activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029810.1;locus_tag=LDO50_RS14655;product=FMN-dependent NADH-azoreductase;protein_id=WP_014722373.1;transl_table=11 NZ_CAJZAO010000138.1 RefSeq gene 907 1806 . - . ID=gene-LDO50_RS14660;Name=LDO50_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14660;old_locus_tag=BVI1335_2220002 NZ_CAJZAO010000138.1 Protein Homology CDS 907 1806 . - 0 ID=cds-WP_212164361.1;Parent=gene-LDO50_RS14660;Dbxref=GenBank:WP_212164361.1;Name=WP_212164361.1;Ontology_term=GO:0006281,GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363007.1;locus_tag=LDO50_RS14660;product=uracil-DNA glycosylase;protein_id=WP_212164361.1;transl_table=11 NZ_CAJZAO010000138.1 RefSeq gene 1819 2445 . - . ID=gene-LDO50_RS14665;Name=LDO50_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14665;old_locus_tag=BVI1335_2220003 NZ_CAJZAO010000138.1 Protein Homology CDS 1819 2445 . - 0 ID=cds-WP_034193971.1;Parent=gene-LDO50_RS14665;Dbxref=GenBank:WP_034193971.1;Name=WP_034193971.1;Ontology_term=GO:0046872,GO:0050355;gbkey=CDS;go_function=metal ion binding|0046872||IEA,inorganic triphosphate phosphatase activity|0050355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363008.1;locus_tag=LDO50_RS14665;product=CYTH domain-containing protein;protein_id=WP_034193971.1;transl_table=11 NZ_CAJZAO010000138.1 RefSeq gene 2445 3230 . - . ID=gene-LDO50_RS14670;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=LDO50_RS14670;old_locus_tag=BVI1335_2220004 NZ_CAJZAO010000138.1 Protein Homology CDS 2445 3230 . - 0 ID=cds-WP_011883151.1;Parent=gene-LDO50_RS14670;Dbxref=GenBank:WP_011883151.1;Name=WP_011883151.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106662.1;locus_tag=LDO50_RS14670;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_011883151.1;transl_table=11 NZ_CAJZAO010000138.1 RefSeq gene 3260 4291 . - . ID=gene-LDO50_RS14675;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=LDO50_RS14675;old_locus_tag=BVI1335_2220005 NZ_CAJZAO010000138.1 Protein Homology CDS 3260 4291 . - 0 ID=cds-WP_011883152.1;Parent=gene-LDO50_RS14675;Dbxref=GenBank:WP_011883152.1;Name=WP_011883152.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406908.1;locus_tag=LDO50_RS14675;product=anthranilate phosphoribosyltransferase;protein_id=WP_011883152.1;transl_table=11 NZ_CAJZAO010000138.1 RefSeq gene 4305 4904 . - . ID=gene-LDO50_RS14680;Name=LDO50_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14680;old_locus_tag=BVI1335_2220006 NZ_CAJZAO010000138.1 Protein Homology CDS 4305 4904 . - 0 ID=cds-WP_011883153.1;Parent=gene-LDO50_RS14680;Dbxref=GenBank:WP_011883153.1;Name=WP_011883153.1;Ontology_term=GO:0000162,GO:0004049,GO:0046820;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA,4-amino-4-deoxychorismate synthase activity|0046820||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898208.1;locus_tag=LDO50_RS14680;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_011883153.1;transl_table=11 NZ_CAJZAO010000138.1 RefSeq gene 4918 6411 . - . ID=gene-LDO50_RS14685;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=LDO50_RS14685;old_locus_tag=BVI1335_2220007 NZ_CAJZAO010000138.1 Protein Homology CDS 4918 6411 . - 0 ID=cds-WP_011883154.1;Parent=gene-LDO50_RS14685;Dbxref=GenBank:WP_011883154.1;Name=WP_011883154.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020070700.1;locus_tag=LDO50_RS14685;product=anthranilate synthase component I;protein_id=WP_011883154.1;transl_table=11 NZ_CAJZAO010000138.1 RefSeq gene 6770 7525 . - . ID=gene-LDO50_RS14690;Name=LDO50_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14690;old_locus_tag=BVI1335_2220009 NZ_CAJZAO010000138.1 Protein Homology CDS 6770 7525 . - 0 ID=cds-WP_045578554.1;Parent=gene-LDO50_RS14690;Dbxref=GenBank:WP_045578554.1;Name=WP_045578554.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655874.1;locus_tag=LDO50_RS14690;product=phosphoglycolate phosphatase;protein_id=WP_045578554.1;transl_table=11 NZ_CAJZAO010000138.1 RefSeq gene 7530 8216 . - . ID=gene-LDO50_RS14695;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=LDO50_RS14695;old_locus_tag=BVI1335_2220010 NZ_CAJZAO010000138.1 Protein Homology CDS 7530 8216 . - 0 ID=cds-WP_034193969.1;Parent=gene-LDO50_RS14695;Dbxref=GenBank:WP_034193969.1;Name=WP_034193969.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883156.1;locus_tag=LDO50_RS14695;product=ribulose-phosphate 3-epimerase;protein_id=WP_034193969.1;transl_table=11 NZ_CAJZAO010000138.1 RefSeq gene 8393 8767 . + . ID=gene-LDO50_RS14700;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=LDO50_RS14700;old_locus_tag=BVI1335_2220011 NZ_CAJZAO010000138.1 Protein Homology CDS 8393 8767 . + 0 ID=cds-WP_011655875.1;Parent=gene-LDO50_RS14700;Dbxref=GenBank:WP_011655875.1;Name=WP_011655875.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186878.1;locus_tag=LDO50_RS14700;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_011655875.1;transl_table=11 NZ_CAJZAO010000138.1 RefSeq gene 8847 10079 . + . ID=gene-LDO50_RS14710;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=LDO50_RS14710;old_locus_tag=BVI1335_2220012 NZ_CAJZAO010000138.1 Protein Homology CDS 8847 10079 . + 0 ID=cds-WP_011883158.1;Parent=gene-LDO50_RS14710;Dbxref=GenBank:WP_011883158.1;Name=WP_011883158.1;Ontology_term=GO:0000270,GO:0008933,GO:0030288;gbkey=CDS;gene=mltA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327838.1;locus_tag=LDO50_RS14710;product=murein transglycosylase A;protein_id=WP_011883158.1;transl_table=11 NZ_CAJZAO010000138.1 RefSeq gene 10272 11570 . - . ID=gene-LDO50_RS14715;Name=paaK;gbkey=Gene;gene=paaK;gene_biotype=protein_coding;locus_tag=LDO50_RS14715;old_locus_tag=BVI1335_2220013 NZ_CAJZAO010000138.1 Protein Homology CDS 10272 11570 . - 0 ID=cds-WP_045578553.1;Parent=gene-LDO50_RS14715;Dbxref=GenBank:WP_045578553.1;Name=WP_045578553.1;Ontology_term=GO:0010124,GO:0047475;gbkey=CDS;gene=paaK;go_function=phenylacetate-CoA ligase activity|0047475||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898201.1;locus_tag=LDO50_RS14715;product=phenylacetate--CoA ligase PaaK;protein_id=WP_045578553.1;transl_table=11 NZ_CAJZAO010000138.1 RefSeq gene 11609 12061 . - . ID=gene-LDO50_RS14720;Name=paaI;gbkey=Gene;gene=paaI;gene_biotype=protein_coding;locus_tag=LDO50_RS14720;old_locus_tag=BVI1335_2220014 NZ_CAJZAO010000138.1 Protein Homology CDS 11609 12061 . - 0 ID=cds-WP_011883160.1;Parent=gene-LDO50_RS14720;Dbxref=GenBank:WP_011883160.1;Name=WP_011883160.1;Ontology_term=GO:0010124,GO:0016790;gbkey=CDS;gene=paaI;go_function=thiolester hydrolase activity|0016790||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350823.1;locus_tag=LDO50_RS14720;product=hydroxyphenylacetyl-CoA thioesterase PaaI;protein_id=WP_011883160.1;transl_table=11 NZ_CAJZAO010000138.1 RefSeq gene 12063 12854 . - . ID=gene-LDO50_RS14725;Name=paaG;gbkey=Gene;gene=paaG;gene_biotype=protein_coding;locus_tag=LDO50_RS14725;old_locus_tag=BVI1335_2220015 NZ_CAJZAO010000138.1 Protein Homology CDS 12063 12854 . - 0 ID=cds-WP_059460379.1;Parent=gene-LDO50_RS14725;Dbxref=GenBank:WP_059460379.1;Name=WP_059460379.1;Ontology_term=GO:0010124,GO:0016853;gbkey=CDS;gene=paaG;go_function=isomerase activity|0016853||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029796.1;locus_tag=LDO50_RS14725;product=2-(1%2C2-epoxy-1%2C2-dihydrophenyl)acetyl-CoA isomerase PaaG;protein_id=WP_059460379.1;transl_table=11 NZ_CAJZAO010000138.1 RefSeq gene 12900 14102 . - . ID=gene-LDO50_RS14730;Name=pcaF;gbkey=Gene;gene=pcaF;gene_biotype=protein_coding;locus_tag=LDO50_RS14730;old_locus_tag=BVI1335_2220016 NZ_CAJZAO010000138.1 Protein Homology CDS 12900 14102 . - 0 ID=cds-WP_224019829.1;Parent=gene-LDO50_RS14730;Dbxref=GenBank:WP_224019829.1;Name=WP_224019829.1;Ontology_term=GO:0019619,GO:0016747;gbkey=CDS;gene=pcaF;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197326.1;locus_tag=LDO50_RS14730;product=3-oxoadipyl-CoA thiolase;protein_id=WP_224019829.1;transl_table=11 NZ_CAJZAO010000138.1 RefSeq gene 14199 15905 . - . ID=gene-LDO50_RS14735;Name=paaN;gbkey=Gene;gene=paaN;gene_biotype=protein_coding;locus_tag=LDO50_RS14735;old_locus_tag=BVI1335_2220017 NZ_CAJZAO010000138.1 Protein Homology CDS 14199 15905 . - 0 ID=cds-WP_224019830.1;Parent=gene-LDO50_RS14735;Dbxref=GenBank:WP_224019830.1;Name=WP_224019830.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaN;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522008.1;locus_tag=LDO50_RS14735;product=phenylacetic acid degradation protein PaaN;protein_id=WP_224019830.1;transl_table=11 NZ_CAJZAO010000138.1 RefSeq gene 16035 16811 . + . ID=gene-LDO50_RS14740;Name=LDO50_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14740;old_locus_tag=BVI1335_2220018 NZ_CAJZAO010000138.1 Protein Homology CDS 16035 16811 . + 0 ID=cds-WP_011883164.1;Parent=gene-LDO50_RS14740;Dbxref=GenBank:WP_011883164.1;Name=WP_011883164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008918651.1;locus_tag=LDO50_RS14740;product=enoyl-CoA hydratase;protein_id=WP_011883164.1;transl_table=11 ##sequence-region NZ_CAJZAO010000139.1 1 10754 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000139.1 RefSeq region 1 10754 . + . ID=NZ_CAJZAO010000139.1:1..10754;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_223 NZ_CAJZAO010000139.1 RefSeq gene 1 343 . - . ID=gene-LDO50_RS14745;Name=LDO50_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14745;partial=true;start_range=.,1 NZ_CAJZAO010000139.1 Protein Homology CDS 1 343 . - 0 ID=cds-WP_224019831.1;Parent=gene-LDO50_RS14745;Dbxref=GenBank:WP_224019831.1;Name=WP_224019831.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329342.1;locus_tag=LDO50_RS14745;partial=true;product=MFS transporter;protein_id=WP_224019831.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000139.1 RefSeq gene 450 1495 . + . ID=gene-LDO50_RS14750;Name=LDO50_RS14750;end_range=1495,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14750;old_locus_tag=BVI1335_2230002;partial=true NZ_CAJZAO010000139.1 Protein Homology CDS 450 1495 . + 0 ID=cds-WP_224019834.1;Parent=gene-LDO50_RS14750;Dbxref=GenBank:WP_224019834.1;Name=WP_224019834.1;end_range=1495,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886191.1;locus_tag=LDO50_RS14750;partial=true;product=LysR substrate-binding domain-containing protein;protein_id=WP_224019834.1;transl_table=11 NZ_CAJZAO010000139.1 RefSeq gene 1732 2625 . - . ID=gene-LDO50_RS14755;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=LDO50_RS14755;old_locus_tag=BVI1335_2230004 NZ_CAJZAO010000139.1 Protein Homology CDS 1732 2625 . - 0 ID=cds-WP_045578727.1;Parent=gene-LDO50_RS14755;Dbxref=GenBank:WP_045578727.1;Name=WP_045578727.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886190.1;locus_tag=LDO50_RS14755;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_045578727.1;transl_table=11 NZ_CAJZAO010000139.1 RefSeq gene 3072 4091 . + . ID=gene-LDO50_RS14760;Name=LDO50_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14760;old_locus_tag=BVI1335_2230005 NZ_CAJZAO010000139.1 Protein Homology CDS 3072 4091 . + 0 ID=cds-WP_011886189.1;Parent=gene-LDO50_RS14760;Dbxref=GenBank:WP_011886189.1;Name=WP_011886189.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760583.1;locus_tag=LDO50_RS14760;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_011886189.1;transl_table=11 NZ_CAJZAO010000139.1 RefSeq gene 4289 5257 . + . ID=gene-LDO50_RS14765;Name=LDO50_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14765;old_locus_tag=BVI1335_2230006 NZ_CAJZAO010000139.1 Protein Homology CDS 4289 5257 . + 0 ID=cds-WP_224019832.1;Parent=gene-LDO50_RS14765;Dbxref=GenBank:WP_224019832.1;Name=WP_224019832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760584.1;locus_tag=LDO50_RS14765;product=ion channel;protein_id=WP_224019832.1;transl_table=11 NZ_CAJZAO010000139.1 RefSeq gene 5321 5878 . + . ID=gene-LDO50_RS14770;Name=LDO50_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14770;old_locus_tag=BVI1335_2230007 NZ_CAJZAO010000139.1 Protein Homology CDS 5321 5878 . + 0 ID=cds-WP_045578729.1;Parent=gene-LDO50_RS14770;Dbxref=GenBank:WP_045578729.1;Name=WP_045578729.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895873.1;locus_tag=LDO50_RS14770;product=sugar O-acetyltransferase;protein_id=WP_045578729.1;transl_table=11 NZ_CAJZAO010000139.1 RefSeq gene 7684 10754 . + . ID=gene-LDO50_RS14775;Name=LDO50_RS14775;end_range=10754,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14775;partial=true NZ_CAJZAO010000139.1 Protein Homology CDS 7684 10754 . + 0 ID=cds-WP_224019833.1;Parent=gene-LDO50_RS14775;Dbxref=GenBank:WP_224019833.1;Name=WP_224019833.1;end_range=10754,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353392.1;locus_tag=LDO50_RS14775;partial=true;product=indolepyruvate ferredoxin oxidoreductase family protein;protein_id=WP_224019833.1;transl_table=11 ##sequence-region NZ_CAJZAO010000140.1 1 5284 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000140.1 RefSeq region 1 5284 . + . ID=NZ_CAJZAO010000140.1:1..5284;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_224 NZ_CAJZAO010000140.1 RefSeq pseudogene 1 107 . + . ID=gene-LDO50_RS14780;Name=LDO50_RS14780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS14780;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000140.1 Protein Homology CDS 1 107 . + 2 ID=cds-LDO50_RS14780;Parent=gene-LDO50_RS14780;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328357.1;locus_tag=LDO50_RS14780;partial=true;product=DUF2069 domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000140.1 RefSeq gene 128 1549 . + . ID=gene-LDO50_RS14785;Name=LDO50_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14785;old_locus_tag=BVI1335_2240001 NZ_CAJZAO010000140.1 Protein Homology CDS 128 1549 . + 0 ID=cds-WP_046428226.1;Parent=gene-LDO50_RS14785;Dbxref=GenBank:WP_046428226.1;Name=WP_046428226.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545230.1;locus_tag=LDO50_RS14785;product=FAD-binding oxidoreductase;protein_id=WP_046428226.1;transl_table=11 NZ_CAJZAO010000140.1 RefSeq gene 1575 2402 . + . ID=gene-LDO50_RS14790;Name=LDO50_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14790;old_locus_tag=BVI1335_2240002 NZ_CAJZAO010000140.1 Protein Homology CDS 1575 2402 . + 0 ID=cds-WP_060121750.1;Parent=gene-LDO50_RS14790;Dbxref=GenBank:WP_060121750.1;Name=WP_060121750.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213558.1;locus_tag=LDO50_RS14790;product=metallophosphoesterase;protein_id=WP_060121750.1;transl_table=11 NZ_CAJZAO010000140.1 RefSeq gene 2469 2627 . - . ID=gene-LDO50_RS14795;Name=LDO50_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14795;old_locus_tag=BVI1335_2240003 NZ_CAJZAO010000140.1 Protein Homology CDS 2469 2627 . - 0 ID=cds-WP_176321548.1;Parent=gene-LDO50_RS14795;Dbxref=GenBank:WP_176321548.1;Name=WP_176321548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897256.1;locus_tag=LDO50_RS14795;product=hypothetical protein;protein_id=WP_176321548.1;transl_table=11 NZ_CAJZAO010000140.1 RefSeq gene 2753 3694 . - . ID=gene-LDO50_RS14800;Name=LDO50_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14800;old_locus_tag=BVI1335_2240004 NZ_CAJZAO010000140.1 Protein Homology CDS 2753 3694 . - 0 ID=cds-WP_034193319.1;Parent=gene-LDO50_RS14800;Dbxref=GenBank:WP_034193319.1;Name=WP_034193319.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115732.1;locus_tag=LDO50_RS14800;product=LysR family transcriptional regulator;protein_id=WP_034193319.1;transl_table=11 NZ_CAJZAO010000140.1 RefSeq gene 3852 5284 . + . ID=gene-LDO50_RS14805;Name=LDO50_RS14805;end_range=5284,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14805;partial=true NZ_CAJZAO010000140.1 Protein Homology CDS 3852 5284 . + 0 ID=cds-WP_224019835.1;Parent=gene-LDO50_RS14805;Dbxref=GenBank:WP_224019835.1;Name=WP_224019835.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;end_range=5284,.;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213560.1;locus_tag=LDO50_RS14805;partial=true;product=efflux transporter outer membrane subunit;protein_id=WP_224019835.1;transl_table=11 ##sequence-region NZ_CAJZAO010000141.1 1 12325 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000141.1 RefSeq region 1 12325 . + . ID=NZ_CAJZAO010000141.1:1..12325;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_225 NZ_CAJZAO010000141.1 RefSeq gene 1 809 . - . ID=gene-LDO50_RS14810;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=LDO50_RS14810;partial=true;start_range=.,1 NZ_CAJZAO010000141.1 Protein Homology CDS 1 809 . - 0 ID=cds-WP_224019836.1;Parent=gene-LDO50_RS14810;Dbxref=GenBank:WP_224019836.1;Name=WP_224019836.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329091.1;locus_tag=LDO50_RS14810;partial=true;product=exodeoxyribonuclease VII large subunit;protein_id=WP_224019836.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000141.1 RefSeq gene 1334 1928 . + . ID=gene-LDO50_RS14815;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=LDO50_RS14815;old_locus_tag=BVI1335_2250004;partial=true;start_range=.,1334 NZ_CAJZAO010000141.1 Protein Homology CDS 1334 1928 . + 1 ID=cds-WP_372586101.1;Parent=gene-LDO50_RS14815;Dbxref=GenBank:WP_372586101.1;Name=WP_372586101.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=lipid-A 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009973003.1;locus_tag=LDO50_RS14815;partial=true;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_372586101.1;start_range=.,1334;transl_table=11 NZ_CAJZAO010000141.1 RefSeq gene 1909 2112 . + . ID=gene-LDO50_RS14820;Name=LDO50_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14820;old_locus_tag=BVI1335_2250005 NZ_CAJZAO010000141.1 Protein Homology CDS 1909 2112 . + 0 ID=cds-WP_006750935.1;Parent=gene-LDO50_RS14820;Dbxref=GenBank:WP_006750935.1;Name=WP_006750935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896244.1;locus_tag=LDO50_RS14820;product=Trm112 family protein;protein_id=WP_006750935.1;transl_table=11 NZ_CAJZAO010000141.1 RefSeq gene 2224 3015 . + . ID=gene-LDO50_RS14825;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=LDO50_RS14825;old_locus_tag=BVI1335_2250006 NZ_CAJZAO010000141.1 Protein Homology CDS 2224 3015 . + 0 ID=cds-WP_046427507.1;Parent=gene-LDO50_RS14825;Dbxref=GenBank:WP_046427507.1;Name=WP_046427507.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102035.1;locus_tag=LDO50_RS14825;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_046427507.1;transl_table=11 NZ_CAJZAO010000141.1 RefSeq gene 3223 3885 . + . ID=gene-LDO50_RS14830;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=LDO50_RS14830;old_locus_tag=BVI1335_2250007 NZ_CAJZAO010000141.1 Protein Homology CDS 3223 3885 . + 0 ID=cds-WP_014723515.1;Parent=gene-LDO50_RS14830;Dbxref=GenBank:WP_014723515.1;Name=WP_014723515.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=AMP kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398497.1;locus_tag=LDO50_RS14830;product=adenylate kinase;protein_id=WP_014723515.1;transl_table=11 NZ_CAJZAO010000141.1 RefSeq gene 4035 4877 . - . ID=gene-LDO50_RS14835;Name=LDO50_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14835;old_locus_tag=BVI1335_2250008 NZ_CAJZAO010000141.1 Protein Homology CDS 4035 4877 . - 0 ID=cds-WP_011885813.1;Parent=gene-LDO50_RS14835;Dbxref=GenBank:WP_011885813.1;Name=WP_011885813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892659.1;locus_tag=LDO50_RS14835;product=SirB1 family protein;protein_id=WP_011885813.1;transl_table=11 NZ_CAJZAO010000141.1 RefSeq gene 4886 6481 . - . ID=gene-LDO50_RS14840;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=LDO50_RS14840;old_locus_tag=BVI1335_2250009 NZ_CAJZAO010000141.1 Protein Homology CDS 4886 6481 . - 0 ID=cds-WP_308010270.1;Parent=gene-LDO50_RS14840;Dbxref=GenBank:WP_308010270.1;Name=WP_308010270.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763574.1;locus_tag=LDO50_RS14840;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_308010270.1;transl_table=11 NZ_CAJZAO010000141.1 RefSeq gene 6741 7013 . + . ID=gene-LDO50_RS14845;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=LDO50_RS14845;old_locus_tag=BVI1335_2250010 NZ_CAJZAO010000141.1 Protein Homology CDS 6741 7013 . + 0 ID=cds-WP_006482211.1;Parent=gene-LDO50_RS14845;Dbxref=GenBank:WP_006482211.1;Name=WP_006482211.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762077.1;locus_tag=LDO50_RS14845;product=30S ribosomal protein S20;protein_id=WP_006482211.1;transl_table=11 NZ_CAJZAO010000141.1 RefSeq gene 7154 7474 . - . ID=gene-LDO50_RS14850;Name=LDO50_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14850;old_locus_tag=BVI1335_2250013 NZ_CAJZAO010000141.1 Protein Homology CDS 7154 7474 . - 0 ID=cds-WP_011885815.1;Parent=gene-LDO50_RS14850;Dbxref=GenBank:WP_011885815.1;Name=WP_011885815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896238.1;locus_tag=LDO50_RS14850;product=DUF3579 domain-containing protein;protein_id=WP_011885815.1;transl_table=11 NZ_CAJZAO010000141.1 RefSeq gene 7889 8818 . + . ID=gene-LDO50_RS14855;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=LDO50_RS14855;old_locus_tag=BVI1335_2250012 NZ_CAJZAO010000141.1 Protein Homology CDS 7889 8818 . + 0 ID=cds-WP_011885816.1;Parent=gene-LDO50_RS14855;Dbxref=GenBank:WP_011885816.1;Name=WP_011885816.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190177.1;locus_tag=LDO50_RS14855;product=ornithine carbamoyltransferase;protein_id=WP_011885816.1;transl_table=11 NZ_CAJZAO010000141.1 RefSeq gene 8933 9982 . - . ID=gene-LDO50_RS14860;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=LDO50_RS14860;old_locus_tag=BVI1335_2250014 NZ_CAJZAO010000141.1 Protein Homology CDS 8933 9982 . - 0 ID=cds-WP_011885817.1;Parent=gene-LDO50_RS14860;Dbxref=GenBank:WP_011885817.1;Name=WP_011885817.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482213.1;locus_tag=LDO50_RS14860;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_011885817.1;transl_table=11 NZ_CAJZAO010000141.1 RefSeq gene 10117 10602 . + . ID=gene-LDO50_RS14865;Name=LDO50_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14865;old_locus_tag=BVI1335_2250015 NZ_CAJZAO010000141.1 Protein Homology CDS 10117 10602 . + 0 ID=cds-WP_011885818.1;Parent=gene-LDO50_RS14865;Dbxref=GenBank:WP_011885818.1;Name=WP_011885818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189237.1;locus_tag=LDO50_RS14865;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_011885818.1;transl_table=11 NZ_CAJZAO010000141.1 RefSeq gene 10687 11325 . - . ID=gene-LDO50_RS14870;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=LDO50_RS14870;old_locus_tag=BVI1335_2250016 NZ_CAJZAO010000141.1 Protein Homology CDS 10687 11325 . - 0 ID=cds-WP_224019837.1;Parent=gene-LDO50_RS14870;Dbxref=GenBank:WP_224019837.1;Name=WP_224019837.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657750.1;locus_tag=LDO50_RS14870;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_224019837.1;transl_table=11 NZ_CAJZAO010000141.1 RefSeq gene 11502 11993 . - . ID=gene-LDO50_RS14875;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=LDO50_RS14875;old_locus_tag=BVI1335_2250017 NZ_CAJZAO010000141.1 Protein Homology CDS 11502 11993 . - 0 ID=cds-WP_059696134.1;Parent=gene-LDO50_RS14875;Dbxref=GenBank:WP_059696134.1;Name=WP_059696134.1;Ontology_term=GO:0043039,GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189587.1;locus_tag=LDO50_RS14875;product=Cys-tRNA(Pro) deacylase;protein_id=WP_059696134.1;transl_table=11 ##sequence-region NZ_CAJZAO010000142.1 1 2520 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000142.1 RefSeq region 1 2520 . + . ID=NZ_CAJZAO010000142.1:1..2520;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_226 NZ_CAJZAO010000142.1 RefSeq pseudogene 1 474 . - . ID=gene-LDO50_RS14880;Name=LDO50_RS14880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS14880;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000142.1 Protein Homology CDS 1 474 . - 0 ID=cds-LDO50_RS14880;Parent=gene-LDO50_RS14880;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725167.1;locus_tag=LDO50_RS14880;partial=true;product=PucR family transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000142.1 RefSeq gene 829 2073 . + . ID=gene-LDO50_RS14885;Name=LDO50_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14885;old_locus_tag=BVI1335_2260002 NZ_CAJZAO010000142.1 Protein Homology CDS 829 2073 . + 0 ID=cds-WP_011881870.1;Parent=gene-LDO50_RS14885;Dbxref=GenBank:WP_011881870.1;Name=WP_011881870.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881870.1;locus_tag=LDO50_RS14885;product=CaiB/BaiF CoA transferase family protein;protein_id=WP_011881870.1;transl_table=11 NZ_CAJZAO010000142.1 RefSeq pseudogene 2198 2520 . + . ID=gene-LDO50_RS14890;Name=LDO50_RS14890;end_range=2520,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS14890;partial=true;pseudo=true NZ_CAJZAO010000142.1 Protein Homology CDS 2198 2520 . + 0 ID=cds-LDO50_RS14890;Parent=gene-LDO50_RS14890;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2520,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008923503.1;locus_tag=LDO50_RS14890;partial=true;product=acyl-CoA dehydrogenase N-terminal domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000143.1 1 10265 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000143.1 RefSeq region 1 10265 . + . ID=NZ_CAJZAO010000143.1:1..10265;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_227 NZ_CAJZAO010000143.1 RefSeq gene 1 146 . - . ID=gene-LDO50_RS14895;Name=LDO50_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14895;partial=true;start_range=.,1 NZ_CAJZAO010000143.1 Protein Homology CDS 1 146 . - 0 ID=cds-WP_276527678.1;Parent=gene-LDO50_RS14895;Dbxref=GenBank:WP_276527678.1;Name=WP_276527678.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018436703.1;locus_tag=LDO50_RS14895;partial=true;product=P-II family nitrogen regulator;protein_id=WP_276527678.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000143.1 RefSeq gene 505 756 . + . ID=gene-LDO50_RS14900;Name=LDO50_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14900;old_locus_tag=BVI1335_2270003 NZ_CAJZAO010000143.1 Protein Homology CDS 505 756 . + 0 ID=cds-WP_011886121.1;Parent=gene-LDO50_RS14900;Dbxref=GenBank:WP_011886121.1;Name=WP_011886121.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008351796.1;locus_tag=LDO50_RS14900;product=accessory factor UbiK family protein;protein_id=WP_011886121.1;transl_table=11 NZ_CAJZAO010000143.1 RefSeq gene 1073 2797 . + . ID=gene-LDO50_RS14905;Name=LDO50_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14905;old_locus_tag=BVI1335_2270004 NZ_CAJZAO010000143.1 Protein Homology CDS 1073 2797 . + 0 ID=cds-WP_224019839.1;Parent=gene-LDO50_RS14905;Dbxref=GenBank:WP_224019839.1;Name=WP_224019839.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546287.1;locus_tag=LDO50_RS14905;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_224019839.1;transl_table=11 NZ_CAJZAO010000143.1 RefSeq gene 3120 3692 . - . ID=gene-LDO50_RS14910;Name=LDO50_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14910;old_locus_tag=BVI1335_2270006 NZ_CAJZAO010000143.1 Protein Homology CDS 3120 3692 . - 0 ID=cds-WP_011886123.1;Parent=gene-LDO50_RS14910;Dbxref=GenBank:WP_011886123.1;Name=WP_011886123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364781.1;locus_tag=LDO50_RS14910;product=hypothetical protein;protein_id=WP_011886123.1;transl_table=11 NZ_CAJZAO010000143.1 RefSeq gene 3855 4391 . + . ID=gene-LDO50_RS14915;Name=LDO50_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14915;old_locus_tag=BVI1335_2270007 NZ_CAJZAO010000143.1 Protein Homology CDS 3855 4391 . + 0 ID=cds-WP_011886124.1;Parent=gene-LDO50_RS14915;Dbxref=GenBank:WP_011886124.1;Name=WP_011886124.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886124.1;locus_tag=LDO50_RS14915;product=peroxiredoxin family protein;protein_id=WP_011886124.1;transl_table=11 NZ_CAJZAO010000143.1 RefSeq gene 4495 5850 . - . ID=gene-LDO50_RS14920;Name=LDO50_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14920;old_locus_tag=BVI1335_2270008 NZ_CAJZAO010000143.1 Protein Homology CDS 4495 5850 . - 0 ID=cds-WP_011886125.1;Parent=gene-LDO50_RS14920;Dbxref=GenBank:WP_011886125.1;Name=WP_011886125.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677,GO:0005524;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198029.1;locus_tag=LDO50_RS14920;product=sigma-54-dependent transcriptional regulator;protein_id=WP_011886125.1;transl_table=11 NZ_CAJZAO010000143.1 RefSeq gene 5918 7951 . - . ID=gene-LDO50_RS14925;Name=LDO50_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14925;old_locus_tag=BVI1335_2270009 NZ_CAJZAO010000143.1 Protein Homology CDS 5918 7951 . - 0 ID=cds-WP_014723710.1;Parent=gene-LDO50_RS14925;Dbxref=GenBank:WP_014723710.1;Name=WP_014723710.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490815.1;locus_tag=LDO50_RS14925;product=sensor histidine kinase;protein_id=WP_014723710.1;transl_table=11 NZ_CAJZAO010000143.1 RefSeq gene 7956 9245 . - . ID=gene-LDO50_RS14930;Name=LDO50_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14930;old_locus_tag=BVI1335_2270010 NZ_CAJZAO010000143.1 Protein Homology CDS 7956 9245 . - 0 ID=cds-WP_034192540.1;Parent=gene-LDO50_RS14930;Dbxref=GenBank:WP_034192540.1;Name=WP_034192540.1;Ontology_term=GO:0006835,GO:0015293;gbkey=CDS;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398167.1;locus_tag=LDO50_RS14930;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_034192540.1;transl_table=11 NZ_CAJZAO010000143.1 RefSeq gene 9718 10265 . - . ID=gene-LDO50_RS14935;Name=LDO50_RS14935;end_range=10265,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14935;old_locus_tag=BVI1335_2270012;partial=true NZ_CAJZAO010000143.1 Protein Homology CDS 9718 10265 . - 2 ID=cds-WP_290370728.1;Parent=gene-LDO50_RS14935;Dbxref=GenBank:WP_290370728.1;Name=WP_290370728.1;Ontology_term=GO:0016627;end_range=10265,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364788.1;locus_tag=LDO50_RS14935;partial=true;product=acyl-CoA dehydrogenase family protein;protein_id=WP_290370728.1;transl_table=11 ##sequence-region NZ_CAJZAO010000144.1 1 5058 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000144.1 RefSeq region 1 5058 . + . ID=NZ_CAJZAO010000144.1:1..5058;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_228 NZ_CAJZAO010000144.1 RefSeq gene 75 1763 . - . ID=gene-LDO50_RS14940;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=LDO50_RS14940;old_locus_tag=BVI1335_2280002 NZ_CAJZAO010000144.1 Protein Homology CDS 75 1763 . - 0 ID=cds-WP_011885451.1;Parent=gene-LDO50_RS14940;Dbxref=GenBank:WP_011885451.1;Name=WP_011885451.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600548.1;locus_tag=LDO50_RS14940;product=urocanate hydratase;protein_id=WP_011885451.1;transl_table=11 NZ_CAJZAO010000144.1 RefSeq gene 1804 2499 . - . ID=gene-LDO50_RS14945;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=LDO50_RS14945;old_locus_tag=BVI1335_2280003 NZ_CAJZAO010000144.1 Protein Homology CDS 1804 2499 . - 0 ID=cds-WP_011885452.1;Parent=gene-LDO50_RS14945;Dbxref=GenBank:WP_011885452.1;Name=WP_011885452.1;Ontology_term=GO:0006355,GO:0006547,GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-histidine metabolic process|0006547||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010116292.1;locus_tag=LDO50_RS14945;product=histidine utilization repressor;protein_id=WP_011885452.1;transl_table=11 NZ_CAJZAO010000144.1 RefSeq gene 2504 4027 . - . ID=gene-LDO50_RS14950;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=LDO50_RS14950;old_locus_tag=BVI1335_2280004 NZ_CAJZAO010000144.1 Protein Homology CDS 2504 4027 . - 0 ID=cds-WP_224019840.1;Parent=gene-LDO50_RS14950;Dbxref=GenBank:WP_224019840.1;Name=WP_224019840.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657420.1;locus_tag=LDO50_RS14950;product=histidine ammonia-lyase;protein_id=WP_224019840.1;transl_table=11 NZ_CAJZAO010000144.1 RefSeq pseudogene 4180 4809 . + . ID=gene-LDO50_RS14955;Name=LDO50_RS14955;end_range=4809,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS14955;partial=true;pseudo=true;start_range=.,4180 NZ_CAJZAO010000144.1 Protein Homology CDS 4180 4809 . + 0 ID=cds-LDO50_RS14955;Parent=gene-LDO50_RS14955;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4809,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549423.1;locus_tag=LDO50_RS14955;partial=true;product=transporter substrate-binding domain-containing protein;pseudo=true;start_range=.,4180;transl_table=11 NZ_CAJZAO010000144.1 RefSeq gene 4781 5058 . - . ID=gene-LDO50_RS14960;Name=LDO50_RS14960;end_range=5058,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14960;old_locus_tag=BVI1335_2280007;partial=true NZ_CAJZAO010000144.1 Protein Homology CDS 4781 5058 . - 2 ID=cds-WP_224019841.1;Parent=gene-LDO50_RS14960;Dbxref=GenBank:WP_224019841.1;Name=WP_224019841.1;Ontology_term=GO:0000287,GO:0008897;end_range=5058,.;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723316.1;locus_tag=LDO50_RS14960;partial=true;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=WP_224019841.1;transl_table=11 ##sequence-region NZ_CAJZAO010000145.1 1 10692 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000145.1 RefSeq region 1 10692 . + . ID=NZ_CAJZAO010000145.1:1..10692;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_229 NZ_CAJZAO010000145.1 RefSeq gene 58 1149 . + . ID=gene-LDO50_RS14965;Name=LDO50_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14965;old_locus_tag=BVI1335_2290001 NZ_CAJZAO010000145.1 Protein Homology CDS 58 1149 . + 0 ID=cds-WP_014724980.1;Parent=gene-LDO50_RS14965;Dbxref=GenBank:WP_014724980.1;Name=WP_014724980.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532862.1;locus_tag=LDO50_RS14965;product=porin;protein_id=WP_014724980.1;transl_table=11 NZ_CAJZAO010000145.1 RefSeq gene 1271 2233 . - . ID=gene-LDO50_RS14970;Name=LDO50_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14970;old_locus_tag=BVI1335_2290002 NZ_CAJZAO010000145.1 Protein Homology CDS 1271 2233 . - 0 ID=cds-WP_011882095.1;Parent=gene-LDO50_RS14970;Dbxref=GenBank:WP_011882095.1;Name=WP_011882095.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554,GO:0048038;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724982.1;locus_tag=LDO50_RS14970;product=quinone oxidoreductase family protein;protein_id=WP_011882095.1;transl_table=11 NZ_CAJZAO010000145.1 RefSeq gene 2277 2528 . - . ID=gene-LDO50_RS14975;Name=LDO50_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14975;old_locus_tag=BVI1335_2290004 NZ_CAJZAO010000145.1 Protein Homology CDS 2277 2528 . - 0 ID=cds-WP_059463788.1;Parent=gene-LDO50_RS14975;Dbxref=GenBank:WP_059463788.1;Name=WP_059463788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490702.1;locus_tag=LDO50_RS14975;product=hypothetical protein;protein_id=WP_059463788.1;transl_table=11 NZ_CAJZAO010000145.1 RefSeq gene 2625 3422 . + . ID=gene-LDO50_RS14980;Name=LDO50_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14980;old_locus_tag=BVI1335_2290003 NZ_CAJZAO010000145.1 Protein Homology CDS 2625 3422 . + 0 ID=cds-WP_059549858.1;Parent=gene-LDO50_RS14980;Dbxref=GenBank:WP_059549858.1;Name=WP_059549858.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882093.1;locus_tag=LDO50_RS14980;product=AraC family transcriptional regulator;protein_id=WP_059549858.1;transl_table=11 NZ_CAJZAO010000145.1 RefSeq gene 3514 4320 . - . ID=gene-LDO50_RS14985;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=LDO50_RS14985;old_locus_tag=BVI1335_2290005 NZ_CAJZAO010000145.1 Protein Homology CDS 3514 4320 . - 0 ID=cds-WP_011882092.1;Parent=gene-LDO50_RS14985;Dbxref=GenBank:WP_011882092.1;Name=WP_011882092.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494968.1;locus_tag=LDO50_RS14985;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_011882092.1;transl_table=11 NZ_CAJZAO010000145.1 RefSeq gene 4335 5138 . - . ID=gene-LDO50_RS14990;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=LDO50_RS14990;old_locus_tag=BVI1335_2290006 NZ_CAJZAO010000145.1 Protein Homology CDS 4335 5138 . - 0 ID=cds-WP_045578059.1;Parent=gene-LDO50_RS14990;Dbxref=GenBank:WP_045578059.1;Name=WP_045578059.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765816.1;locus_tag=LDO50_RS14990;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=WP_045578059.1;transl_table=11 NZ_CAJZAO010000145.1 RefSeq gene 5159 5551 . - . ID=gene-LDO50_RS14995;Name=LDO50_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS14995;old_locus_tag=BVI1335_2290007 NZ_CAJZAO010000145.1 Protein Homology CDS 5159 5551 . - 0 ID=cds-WP_014724986.1;Parent=gene-LDO50_RS14995;Dbxref=GenBank:WP_014724986.1;Name=WP_014724986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479169.1;locus_tag=LDO50_RS14995;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_014724986.1;transl_table=11 NZ_CAJZAO010000145.1 RefSeq gene 5581 6429 . - . ID=gene-LDO50_RS15000;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=LDO50_RS15000;old_locus_tag=BVI1335_2290008 NZ_CAJZAO010000145.1 Protein Homology CDS 5581 6429 . - 0 ID=cds-WP_011882089.1;Parent=gene-LDO50_RS15000;Dbxref=GenBank:WP_011882089.1;Name=WP_011882089.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882089.1;locus_tag=LDO50_RS15000;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_011882089.1;transl_table=11 NZ_CAJZAO010000145.1 RefSeq gene 6481 7944 . - . ID=gene-LDO50_RS15005;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=LDO50_RS15005;old_locus_tag=BVI1335_2290009 NZ_CAJZAO010000145.1 Protein Homology CDS 6481 7944 . - 0 ID=cds-WP_059463786.1;Parent=gene-LDO50_RS15005;Dbxref=GenBank:WP_059463786.1;Name=WP_059463786.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009900809.1;locus_tag=LDO50_RS15005;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_059463786.1;transl_table=11 NZ_CAJZAO010000145.1 RefSeq gene 7967 8731 . - . ID=gene-LDO50_RS15010;Name=LDO50_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15010;old_locus_tag=BVI1335_2290010 NZ_CAJZAO010000145.1 Protein Homology CDS 7967 8731 . - 0 ID=cds-WP_046427343.1;Parent=gene-LDO50_RS15010;Dbxref=GenBank:WP_046427343.1;Name=WP_046427343.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765813.1;locus_tag=LDO50_RS15010;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_046427343.1;transl_table=11 NZ_CAJZAO010000145.1 RefSeq gene 8728 9417 . - . ID=gene-LDO50_RS15015;Name=LDO50_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15015;old_locus_tag=BVI1335_2290011 NZ_CAJZAO010000145.1 Protein Homology CDS 8728 9417 . - 0 ID=cds-WP_034193486.1;Parent=gene-LDO50_RS15015;Dbxref=GenBank:WP_034193486.1;Name=WP_034193486.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415060.1;locus_tag=LDO50_RS15015;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_034193486.1;transl_table=11 NZ_CAJZAO010000145.1 RefSeq gene 9570 10010 . + . ID=gene-LDO50_RS15020;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=LDO50_RS15020;old_locus_tag=BVI1335_2290012 NZ_CAJZAO010000145.1 Protein Homology CDS 9570 10010 . + 0 ID=cds-WP_011882085.1;Parent=gene-LDO50_RS15020;Dbxref=GenBank:WP_011882085.1;Name=WP_011882085.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882085.1;locus_tag=LDO50_RS15020;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_011882085.1;transl_table=11 NZ_CAJZAO010000145.1 RefSeq pseudogene 10093 10507 . - . ID=gene-LDO50_RS15025;Name=LDO50_RS15025;end_range=10507,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS15025;old_locus_tag=BVI1335_2290013;partial=true;pseudo=true NZ_CAJZAO010000145.1 Protein Homology CDS 10093 10507 . - 1 ID=cds-LDO50_RS15025;Parent=gene-LDO50_RS15025;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=10507,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658669.1;locus_tag=LDO50_RS15025;partial=true;product=SDR family oxidoreductase;pseudo=true;transl_table=11 NZ_CAJZAO010000145.1 RefSeq pseudogene 10518 10692 . - . ID=gene-LDO50_RS31545;Name=LDO50_RS31545;end_range=10692,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31545;old_locus_tag=BVI1335_2290014;partial=true;pseudo=true;start_range=.,10518 NZ_CAJZAO010000145.1 Protein Homology CDS 10518 10692 . - 0 ID=cds-LDO50_RS31545;Parent=gene-LDO50_RS31545;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=10692,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403686.1;locus_tag=LDO50_RS31545;partial=true;product=SDR family oxidoreductase;pseudo=true;start_range=.,10518;transl_table=11 ##sequence-region NZ_CAJZAO010000146.1 1 28483 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000146.1 RefSeq region 1 28483 . + . ID=NZ_CAJZAO010000146.1:1..28483;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_23 NZ_CAJZAO010000146.1 RefSeq gene 1 3637 . + . ID=gene-LDO50_RS15030;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=LDO50_RS15030;old_locus_tag=BVI1335_230001;partial=true;start_range=.,1 NZ_CAJZAO010000146.1 Protein Homology CDS 1 3637 . + 1 ID=cds-WP_224019842.1;Parent=gene-LDO50_RS15030;Dbxref=GenBank:WP_224019842.1;Name=WP_224019842.1;Ontology_term=GO:0003724;gbkey=CDS;gene=hrpA;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401985.1;locus_tag=LDO50_RS15030;partial=true;product=ATP-dependent RNA helicase HrpA;protein_id=WP_224019842.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000146.1 RefSeq gene 3784 4773 . + . ID=gene-LDO50_RS15035;Name=LDO50_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15035;old_locus_tag=BVI1335_230002 NZ_CAJZAO010000146.1 Protein Homology CDS 3784 4773 . + 0 ID=cds-WP_011885441.1;Parent=gene-LDO50_RS15035;Dbxref=GenBank:WP_011885441.1;Name=WP_011885441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600540.1;locus_tag=LDO50_RS15035;product=YVTN family beta-propeller repeat protein;protein_id=WP_011885441.1;transl_table=11 NZ_CAJZAO010000146.1 RefSeq gene 4790 5764 . + . ID=gene-LDO50_RS15040;Name=LDO50_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15040;old_locus_tag=BVI1335_230003 NZ_CAJZAO010000146.1 Protein Homology CDS 4790 5764 . + 0 ID=cds-WP_011885440.1;Parent=gene-LDO50_RS15040;Dbxref=GenBank:WP_011885440.1;Name=WP_011885440.1;Ontology_term=GO:0006629,GO:0008610,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=lipid metabolic process|0006629||IEA,lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657401.1;locus_tag=LDO50_RS15040;product=sterol desaturase family protein;protein_id=WP_011885440.1;transl_table=11 NZ_CAJZAO010000146.1 RefSeq gene 5874 6701 . + . ID=gene-LDO50_RS15045;Name=LDO50_RS15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15045;old_locus_tag=BVI1335_230005 NZ_CAJZAO010000146.1 Protein Homology CDS 5874 6701 . + 0 ID=cds-WP_011885439.1;Parent=gene-LDO50_RS15045;Dbxref=GenBank:WP_011885439.1;Name=WP_011885439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478362.1;locus_tag=LDO50_RS15045;product=EI24 domain-containing protein;protein_id=WP_011885439.1;transl_table=11 NZ_CAJZAO010000146.1 RefSeq gene 6698 7513 . + . ID=gene-LDO50_RS15050;Name=LDO50_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15050;old_locus_tag=BVI1335_230004 NZ_CAJZAO010000146.1 Protein Homology CDS 6698 7513 . + 0 ID=cds-WP_011885438.1;Parent=gene-LDO50_RS15050;Dbxref=GenBank:WP_011885438.1;Name=WP_011885438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896604.1;locus_tag=LDO50_RS15050;product=competence/damage-inducible protein A;protein_id=WP_011885438.1;transl_table=11 NZ_CAJZAO010000146.1 RefSeq gene 7674 8138 . - . ID=gene-LDO50_RS15055;Name=LDO50_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15055;old_locus_tag=BVI1335_230006 NZ_CAJZAO010000146.1 Protein Homology CDS 7674 8138 . - 0 ID=cds-WP_034194564.1;Parent=gene-LDO50_RS15055;Dbxref=GenBank:WP_034194564.1;Name=WP_034194564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010116266.1;locus_tag=LDO50_RS15055;product=rhodanese-like domain-containing protein;protein_id=WP_034194564.1;transl_table=11 NZ_CAJZAO010000146.1 RefSeq gene 8545 9960 . + . ID=gene-LDO50_RS15060;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=LDO50_RS15060;old_locus_tag=BVI1335_230008 NZ_CAJZAO010000146.1 Protein Homology CDS 8545 9960 . + 0 ID=cds-WP_011885436.1;Parent=gene-LDO50_RS15060;Dbxref=GenBank:WP_011885436.1;Name=WP_011885436.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017777963.1;locus_tag=LDO50_RS15060;product=type I glutamate--ammonia ligase;protein_id=WP_011885436.1;transl_table=11 NZ_CAJZAO010000146.1 RefSeq gene 10122 11264 . + . ID=gene-LDO50_RS15065;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=LDO50_RS15065;old_locus_tag=BVI1335_230009 NZ_CAJZAO010000146.1 Protein Homology CDS 10122 11264 . + 0 ID=cds-WP_014723296.1;Parent=gene-LDO50_RS15065;Dbxref=GenBank:WP_014723296.1;Name=WP_014723296.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192981.1;locus_tag=LDO50_RS15065;product=nitrogen regulation protein NR(II);protein_id=WP_014723296.1;transl_table=11 NZ_CAJZAO010000146.1 RefSeq gene 11311 12831 . + . ID=gene-LDO50_RS15070;Name=ntrC;gbkey=Gene;gene=ntrC;gene_biotype=protein_coding;locus_tag=LDO50_RS15070;old_locus_tag=BVI1335_230010 NZ_CAJZAO010000146.1 Protein Homology CDS 11311 12831 . + 0 ID=cds-WP_011885434.1;Parent=gene-LDO50_RS15070;Dbxref=GenBank:WP_011885434.1;Name=WP_011885434.1;Ontology_term=GO:0000160,GO:0006808,GO:0000156,GO:0003677,GO:0005524;gbkey=CDS;gene=ntrC;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413938.1;locus_tag=LDO50_RS15070;product=nitrogen regulation protein NR(I);protein_id=WP_011885434.1;transl_table=11 NZ_CAJZAO010000146.1 RefSeq gene 12910 15054 . + . ID=gene-LDO50_RS15075;Name=LDO50_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15075;old_locus_tag=BVI1335_230011 NZ_CAJZAO010000146.1 Protein Homology CDS 12910 15054 . + 0 ID=cds-WP_224019843.1;Parent=gene-LDO50_RS15075;Dbxref=GenBank:WP_224019843.1;Name=WP_224019843.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885433.1;locus_tag=LDO50_RS15075;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_224019843.1;transl_table=11 NZ_CAJZAO010000146.1 RefSeq gene 15085 15861 . - . ID=gene-LDO50_RS15080;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=LDO50_RS15080;old_locus_tag=BVI1335_230012 NZ_CAJZAO010000146.1 Protein Homology CDS 15085 15861 . - 0 ID=cds-WP_059462111.1;Parent=gene-LDO50_RS15080;Dbxref=GenBank:WP_059462111.1;Name=WP_059462111.1;Ontology_term=GO:0006281,GO:0008311;gbkey=CDS;gene=xth;go_function=double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890139.1;locus_tag=LDO50_RS15080;product=exodeoxyribonuclease III;protein_id=WP_059462111.1;transl_table=11 NZ_CAJZAO010000146.1 RefSeq gene 16054 16130 . + . ID=gene-LDO50_RS15085;Name=LDO50_RS15085;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS15085;old_locus_tag=BVI1335_TRNA3 NZ_CAJZAO010000146.1 tRNAscan-SE tRNA 16054 16130 . + . ID=rna-LDO50_RS15085;Parent=gene-LDO50_RS15085;anticodon=(pos:16088..16090);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS15085;product=tRNA-Met NZ_CAJZAO010000146.1 tRNAscan-SE exon 16054 16130 . + . ID=exon-LDO50_RS15085-1;Parent=rna-LDO50_RS15085;anticodon=(pos:16088..16090);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS15085;product=tRNA-Met NZ_CAJZAO010000146.1 RefSeq gene 16213 16905 . - . ID=gene-LDO50_RS15090;Name=LDO50_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15090;old_locus_tag=BVI1335_230013 NZ_CAJZAO010000146.1 Protein Homology CDS 16213 16905 . - 0 ID=cds-WP_045578951.1;Parent=gene-LDO50_RS15090;Dbxref=GenBank:WP_045578951.1;Name=WP_045578951.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758930.1;locus_tag=LDO50_RS15090;product=aspartate/glutamate racemase family protein;protein_id=WP_045578951.1;transl_table=11 NZ_CAJZAO010000146.1 RefSeq gene 17086 18492 . + . ID=gene-LDO50_RS15095;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=LDO50_RS15095;old_locus_tag=BVI1335_230014 NZ_CAJZAO010000146.1 Protein Homology CDS 17086 18492 . + 0 ID=cds-WP_081053541.1;Parent=gene-LDO50_RS15095;Dbxref=GenBank:WP_081053541.1;Name=WP_081053541.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723293.1;locus_tag=LDO50_RS15095;product=DNA polymerase IV;protein_id=WP_081053541.1;transl_table=11 NZ_CAJZAO010000146.1 RefSeq gene 18555 20642 . - . ID=gene-LDO50_RS15100;Name=LDO50_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15100;old_locus_tag=BVI1335_230015 NZ_CAJZAO010000146.1 Protein Homology CDS 18555 20642 . - 0 ID=cds-WP_014723292.1;Parent=gene-LDO50_RS15100;Dbxref=GenBank:WP_014723292.1;Name=WP_014723292.1;Ontology_term=GO:0006508,GO:0004222,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723292.1;locus_tag=LDO50_RS15100;product=M3 family metallopeptidase;protein_id=WP_014723292.1;transl_table=11 NZ_CAJZAO010000146.1 RefSeq gene 20937 21791 . - . ID=gene-LDO50_RS15105;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=LDO50_RS15105;old_locus_tag=BVI1335_230016 NZ_CAJZAO010000146.1 Protein Homology CDS 20937 21791 . - 0 ID=cds-WP_046428805.1;Parent=gene-LDO50_RS15105;Dbxref=GenBank:WP_046428805.1;Name=WP_046428805.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885428.1;locus_tag=LDO50_RS15105;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_046428805.1;transl_table=11 NZ_CAJZAO010000146.1 RefSeq gene 22031 22669 . - . ID=gene-LDO50_RS15110;Name=fixJ;gbkey=Gene;gene=fixJ;gene_biotype=protein_coding;locus_tag=LDO50_RS15110;old_locus_tag=BVI1335_230017 NZ_CAJZAO010000146.1 Protein Homology CDS 22031 22669 . - 0 ID=cds-WP_006493245.1;Parent=gene-LDO50_RS15110;Dbxref=GenBank:WP_006493245.1;Name=WP_006493245.1;gbkey=CDS;gene=fixJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698749.1;locus_tag=LDO50_RS15110;product=oxygen response regulator transcription factor FixJ;protein_id=WP_006493245.1;transl_table=11 NZ_CAJZAO010000146.1 RefSeq gene 22666 25182 . - . ID=gene-LDO50_RS15115;Name=fixL;gbkey=Gene;gene=fixL;gene_biotype=protein_coding;locus_tag=LDO50_RS15115;old_locus_tag=BVI1335_230018 NZ_CAJZAO010000146.1 Protein Homology CDS 22666 25182 . - 0 ID=cds-WP_011885427.1;Parent=gene-LDO50_RS15115;Dbxref=GenBank:WP_011885427.1;Name=WP_011885427.1;gbkey=CDS;gene=fixL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758934.1;locus_tag=LDO50_RS15115;product=oxygen sensor histidine kinase FixL;protein_id=WP_011885427.1;transl_table=11 NZ_CAJZAO010000146.1 RefSeq pseudogene 25102 25319 . + . ID=gene-LDO50_RS31080;Name=LDO50_RS31080;end_range=25319,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31080;partial=true;pseudo=true NZ_CAJZAO010000146.1 Protein Homology CDS 25102 25319 . + 0 ID=cds-LDO50_RS31080;Parent=gene-LDO50_RS31080;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=25319,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524718.1;locus_tag=LDO50_RS31080;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CAJZAO010000146.1 RefSeq gene 25455 28151 . + . ID=gene-LDO50_RS15120;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=LDO50_RS15120;old_locus_tag=BVI1335_230019 NZ_CAJZAO010000146.1 Protein Homology CDS 25455 28151 . + 0 ID=cds-WP_011885426.1;Parent=gene-LDO50_RS15120;Dbxref=GenBank:WP_011885426.1;Name=WP_011885426.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478378.1;locus_tag=LDO50_RS15120;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_011885426.1;transl_table=11 NZ_CAJZAO010000146.1 RefSeq gene 28222 28483 . + . ID=gene-LDO50_RS15125;Name=LDO50_RS15125;end_range=28483,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15125;partial=true NZ_CAJZAO010000146.1 Protein Homology CDS 28222 28483 . + 0 ID=cds-WP_290370729.1;Parent=gene-LDO50_RS15125;Dbxref=GenBank:WP_290370729.1;Name=WP_290370729.1;end_range=28483,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917772.1;locus_tag=LDO50_RS15125;partial=true;product=biotin/lipoyl-containing protein;protein_id=WP_290370729.1;transl_table=11 ##sequence-region NZ_CAJZAO010000147.1 1 2650 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000147.1 RefSeq region 1 2650 . + . ID=NZ_CAJZAO010000147.1:1..2650;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_230 NZ_CAJZAO010000147.1 RefSeq gene 1 127 . + . ID=gene-LDO50_RS15130;Name=LDO50_RS15130;end_range=127,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15130;partial=true;start_range=.,1 NZ_CAJZAO010000147.1 Protein Homology CDS 1 127 . + 2 ID=cds-WP_224019844.1;Parent=gene-LDO50_RS15130;Dbxref=GenBank:WP_224019844.1;Name=WP_224019844.1;Ontology_term=GO:0015703,GO:0015109;end_range=127,.;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212841.1;locus_tag=LDO50_RS15130;partial=true;product=chromate transporter;protein_id=WP_224019844.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000147.1 RefSeq pseudogene 597 878 . - . ID=gene-LDO50_RS15135;Name=LDO50_RS15135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS15135;partial=true;pseudo=true;start_range=.,597 NZ_CAJZAO010000147.1 Protein Homology CDS 597 878 . - 0 ID=cds-LDO50_RS15135;Parent=gene-LDO50_RS15135;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413560.1;locus_tag=LDO50_RS15135;partial=true;product=PAAR domain-containing protein;pseudo=true;start_range=.,597;transl_table=11 NZ_CAJZAO010000147.1 RefSeq gene 894 1551 . - . ID=gene-LDO50_RS15140;Name=LDO50_RS15140;end_range=1551,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15140;old_locus_tag=BVI1335_2300004;partial=true NZ_CAJZAO010000147.1 Protein Homology CDS 894 1551 . - 1 ID=cds-WP_372586102.1;Parent=gene-LDO50_RS15140;Dbxref=GenBank:WP_372586102.1;Name=WP_372586102.1;end_range=1551,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885800.1;locus_tag=LDO50_RS15140;partial=true;product=T6SS immunity protein Tli4 family protein;protein_id=WP_372586102.1;transl_table=11 NZ_CAJZAO010000147.1 RefSeq pseudogene 1562 1841 . - . ID=gene-LDO50_RS31550;Name=LDO50_RS31550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31550;partial=true;pseudo=true;start_range=.,1562 NZ_CAJZAO010000147.1 Protein Homology CDS 1562 1841 . - 0 ID=cds-LDO50_RS31550;Parent=gene-LDO50_RS31550;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037349.6;locus_tag=LDO50_RS31550;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1562;transl_table=11 NZ_CAJZAO010000147.1 RefSeq pseudogene 1838 2650 . - . ID=gene-LDO50_RS15145;Name=LDO50_RS15145;end_range=2650,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS15145;old_locus_tag=BVI1335_2300006;partial=true;pseudo=true NZ_CAJZAO010000147.1 Protein Homology CDS 1838 2650 . - 0 ID=cds-LDO50_RS15145;Parent=gene-LDO50_RS15145;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2650,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885801.1;locus_tag=LDO50_RS15145;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000148.1 1 2191 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000148.1 RefSeq region 1 2191 . + . ID=NZ_CAJZAO010000148.1:1..2191;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_231 NZ_CAJZAO010000148.1 RefSeq gene 1 1909 . - . ID=gene-LDO50_RS15150;Name=LDO50_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15150;partial=true;start_range=.,1 NZ_CAJZAO010000148.1 Protein Homology CDS 1 1909 . - 0 ID=cds-WP_224019845.1;Parent=gene-LDO50_RS15150;Dbxref=GenBank:WP_224019845.1;Name=WP_224019845.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218308.1;locus_tag=LDO50_RS15150;partial=true;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_224019845.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAO010000149.1 1 13428 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000149.1 RefSeq region 1 13428 . + . ID=NZ_CAJZAO010000149.1:1..13428;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_232 NZ_CAJZAO010000149.1 RefSeq gene 1 647 . + . ID=gene-LDO50_RS31555;Name=LDO50_RS31555;end_range=647,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31555;old_locus_tag=BVI1335_2320001;partial=true;start_range=.,1 NZ_CAJZAO010000149.1 Protein Homology CDS 1 647 . + 0 ID=cds-WP_443797779.1;Parent=gene-LDO50_RS31555;Dbxref=GenBank:WP_443797779.1;Name=WP_443797779.1;Ontology_term=GO:0016491;end_range=647,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497969.1;locus_tag=LDO50_RS31555;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_443797779.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000149.1 RefSeq gene 658 1124 . + . ID=gene-LDO50_RS31560;Name=LDO50_RS31560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31560;partial=true;start_range=.,658 NZ_CAJZAO010000149.1 Protein Homology CDS 658 1124 . + 2 ID=cds-WP_443797780.1;Parent=gene-LDO50_RS31560;Dbxref=GenBank:WP_443797780.1;Name=WP_443797780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497969.1;locus_tag=LDO50_RS31560;partial=true;product=(2Fe-2S)-binding protein;protein_id=WP_443797780.1;start_range=.,658;transl_table=11 NZ_CAJZAO010000149.1 RefSeq gene 1174 1962 . + . ID=gene-LDO50_RS15160;Name=LDO50_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15160;old_locus_tag=BVI1335_2320003 NZ_CAJZAO010000149.1 Protein Homology CDS 1174 1962 . + 0 ID=cds-WP_011880754.1;Parent=gene-LDO50_RS15160;Dbxref=GenBank:WP_011880754.1;Name=WP_011880754.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416946.1;locus_tag=LDO50_RS15160;product=ABC transporter substrate-binding protein;protein_id=WP_011880754.1;transl_table=11 NZ_CAJZAO010000149.1 RefSeq gene 2018 2971 . - . ID=gene-LDO50_RS15165;Name=LDO50_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15165;old_locus_tag=BVI1335_2320004 NZ_CAJZAO010000149.1 Protein Homology CDS 2018 2971 . - 0 ID=cds-WP_011880753.1;Parent=gene-LDO50_RS15165;Dbxref=GenBank:WP_011880753.1;Name=WP_011880753.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880753.1;locus_tag=LDO50_RS15165;product=GlxA family transcriptional regulator;protein_id=WP_011880753.1;transl_table=11 NZ_CAJZAO010000149.1 RefSeq pseudogene 3094 3192 . - . ID=gene-LDO50_RS15170;Name=LDO50_RS15170;end_range=3192,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS15170;partial=true;pseudo=true;start_range=.,3094 NZ_CAJZAO010000149.1 Protein Homology CDS 3094 3192 . - 0 ID=cds-LDO50_RS15170;Parent=gene-LDO50_RS15170;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3192,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890744.1;locus_tag=LDO50_RS15170;partial=true;product=glycosyltransferase;pseudo=true;start_range=.,3094;transl_table=11 NZ_CAJZAO010000149.1 RefSeq gene 3341 4105 . - . ID=gene-LDO50_RS15175;Name=LDO50_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15175;old_locus_tag=BVI1335_2320005 NZ_CAJZAO010000149.1 Protein Homology CDS 3341 4105 . - 0 ID=cds-WP_014723959.1;Parent=gene-LDO50_RS15175;Dbxref=GenBank:WP_014723959.1;Name=WP_014723959.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013342584.1;locus_tag=LDO50_RS15175;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_014723959.1;transl_table=11 NZ_CAJZAO010000149.1 RefSeq gene 4242 5159 . + . ID=gene-LDO50_RS15180;Name=LDO50_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15180;old_locus_tag=BVI1335_2320006 NZ_CAJZAO010000149.1 Protein Homology CDS 4242 5159 . + 0 ID=cds-WP_059457256.1;Parent=gene-LDO50_RS15180;Dbxref=GenBank:WP_059457256.1;Name=WP_059457256.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012371928.1;locus_tag=LDO50_RS15180;product=LysR family transcriptional regulator;protein_id=WP_059457256.1;transl_table=11 NZ_CAJZAO010000149.1 RefSeq gene 5337 6464 . + . ID=gene-LDO50_RS15185;Name=LDO50_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15185;old_locus_tag=BVI1335_2320007 NZ_CAJZAO010000149.1 Protein Homology CDS 5337 6464 . + 0 ID=cds-WP_014723956.1;Parent=gene-LDO50_RS15185;Dbxref=GenBank:WP_014723956.1;Name=WP_014723956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723956.1;locus_tag=LDO50_RS15185;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_014723956.1;transl_table=11 NZ_CAJZAO010000149.1 RefSeq gene 6528 8828 . - . ID=gene-LDO50_RS15190;Name=LDO50_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15190;old_locus_tag=BVI1335_2320008 NZ_CAJZAO010000149.1 Protein Homology CDS 6528 8828 . - 0 ID=cds-WP_011880749.1;Parent=gene-LDO50_RS15190;Dbxref=GenBank:WP_011880749.1;Name=WP_011880749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756108.1;locus_tag=LDO50_RS15190;product=NADP-dependent malic enzyme;protein_id=WP_011880749.1;transl_table=11 NZ_CAJZAO010000149.1 RefSeq gene 8964 9935 . + . ID=gene-LDO50_RS15195;Name=LDO50_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15195;old_locus_tag=BVI1335_2320009 NZ_CAJZAO010000149.1 Protein Homology CDS 8964 9935 . + 0 ID=cds-WP_034195484.1;Parent=gene-LDO50_RS15195;Dbxref=GenBank:WP_034195484.1;Name=WP_034195484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898561.1;locus_tag=LDO50_RS15195;product=LysR substrate-binding domain-containing protein;protein_id=WP_034195484.1;transl_table=11 NZ_CAJZAO010000149.1 RefSeq gene 10200 11153 . + . ID=gene-LDO50_RS15200;Name=LDO50_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15200;old_locus_tag=BVI1335_2320010 NZ_CAJZAO010000149.1 Protein Homology CDS 10200 11153 . + 0 ID=cds-WP_011880747.1;Parent=gene-LDO50_RS15200;Dbxref=GenBank:WP_011880747.1;Name=WP_011880747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017328652.1;locus_tag=LDO50_RS15200;product=choline ABC transporter substrate-binding protein;protein_id=WP_011880747.1;transl_table=11 NZ_CAJZAO010000149.1 RefSeq gene 11208 12117 . + . ID=gene-LDO50_RS15205;Name=LDO50_RS15205;end_range=12117,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15205;old_locus_tag=BVI1335_2320011;partial=true NZ_CAJZAO010000149.1 Protein Homology CDS 11208 12117 . + 0 ID=cds-WP_224019846.1;Parent=gene-LDO50_RS15205;Dbxref=GenBank:WP_224019846.1;Name=WP_224019846.1;Ontology_term=GO:0019475,GO:0043720,GO:0046872;end_range=12117,.;gbkey=CDS;go_function=3-keto-5-aminohexanoate cleavage activity|0043720||IEA,metal ion binding|0046872||IEA;go_process=L-lysine fermentation|0019475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396403.1;locus_tag=LDO50_RS15205;partial=true;product=3-keto-5-aminohexanoate cleavage protein;protein_id=WP_224019846.1;transl_table=11 NZ_CAJZAO010000149.1 RefSeq gene 12128 12954 . + . ID=gene-LDO50_RS15210;Name=LDO50_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15210;old_locus_tag=BVI1335_2320012;partial=true;start_range=.,12128 NZ_CAJZAO010000149.1 Protein Homology CDS 12128 12954 . + 2 ID=cds-WP_224019847.1;Parent=gene-LDO50_RS15210;Dbxref=GenBank:WP_224019847.1;Name=WP_224019847.1;Ontology_term=GO:0006631,GO:0016616,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254802.1;locus_tag=LDO50_RS15210;partial=true;product=L-carnitine dehydrogenase;protein_id=WP_224019847.1;start_range=.,12128;transl_table=11 NZ_CAJZAO010000149.1 RefSeq gene 12961 13214 . + . ID=gene-LDO50_RS31085;Name=LDO50_RS31085;end_range=13214,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31085;old_locus_tag=BVI1335_2320013;partial=true NZ_CAJZAO010000149.1 Protein Homology CDS 12961 13214 . + 0 ID=cds-WP_224056757.1;Parent=gene-LDO50_RS31085;Dbxref=GenBank:WP_224056757.1;Name=WP_224056757.1;end_range=13214,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898568.1;locus_tag=LDO50_RS31085;partial=true;product=thioesterase family protein;protein_id=WP_224056757.1;transl_table=11 NZ_CAJZAO010000149.1 RefSeq pseudogene 13225 13363 . + . ID=gene-LDO50_RS31565;Name=LDO50_RS31565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31565;partial=true;pseudo=true;start_range=.,13225 NZ_CAJZAO010000149.1 Protein Homology CDS 13225 13363 . + 1 ID=cds-LDO50_RS31565;Parent=gene-LDO50_RS31565;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733446.1;locus_tag=LDO50_RS31565;partial=true;product=thioesterase family protein;pseudo=true;start_range=.,13225;transl_table=11 ##sequence-region NZ_CAJZAO010000150.1 1 3388 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000150.1 RefSeq region 1 3388 . + . ID=NZ_CAJZAO010000150.1:1..3388;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_233 NZ_CAJZAO010000150.1 RefSeq pseudogene 62 237 . - . ID=gene-LDO50_RS31570;Name=LDO50_RS31570;end_range=237,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31570;old_locus_tag=BVI1335_2330001;partial=true;pseudo=true NZ_CAJZAO010000150.1 Protein Homology CDS 62 237 . - 2 ID=cds-LDO50_RS31570;Parent=gene-LDO50_RS31570;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=237,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362790.1;locus_tag=LDO50_RS31570;partial=true;product=pyridoxamine 5'-phosphate oxidase family protein;pseudo=true;transl_table=11 NZ_CAJZAO010000150.1 RefSeq pseudogene 248 519 . - . ID=gene-LDO50_RS31575;Name=LDO50_RS31575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31575;old_locus_tag=BVI1335_2330002;partial=true;pseudo=true;start_range=.,248 NZ_CAJZAO010000150.1 Protein Homology CDS 248 519 . - 0 ID=cds-LDO50_RS31575;Parent=gene-LDO50_RS31575;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362790.1;locus_tag=LDO50_RS31575;partial=true;product=pyridoxamine 5'-phosphate oxidase family protein;pseudo=true;start_range=.,248;transl_table=11 NZ_CAJZAO010000150.1 RefSeq gene 834 2360 . + . ID=gene-LDO50_RS15225;Name=exaC;gbkey=Gene;gene=exaC;gene_biotype=protein_coding;locus_tag=LDO50_RS15225;old_locus_tag=BVI1335_2330003 NZ_CAJZAO010000150.1 Protein Homology CDS 834 2360 . + 0 ID=cds-WP_011882841.1;Parent=gene-LDO50_RS15225;Dbxref=GenBank:WP_011882841.1;Name=WP_011882841.1;Ontology_term=GO:0006068,GO:0004029;gbkey=CDS;gene=exaC;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA;go_process=ethanol catabolic process|0006068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489874.1;locus_tag=LDO50_RS15225;product=acetaldehyde dehydrogenase ExaC;protein_id=WP_011882841.1;transl_table=11 NZ_CAJZAO010000150.1 RefSeq gene 2807 3220 . + . ID=gene-LDO50_RS15230;Name=LDO50_RS15230;end_range=3220,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15230;old_locus_tag=BVI1335_2330004;partial=true NZ_CAJZAO010000150.1 Protein Homology CDS 2807 3220 . + 0 ID=cds-WP_443797781.1;Parent=gene-LDO50_RS15230;Dbxref=GenBank:WP_443797781.1;Name=WP_443797781.1;end_range=3220,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882842.1;locus_tag=LDO50_RS15230;partial=true;product=hypothetical protein;protein_id=WP_443797781.1;transl_table=11 ##sequence-region NZ_CAJZAO010000151.1 1 19061 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000151.1 RefSeq region 1 19061 . + . ID=NZ_CAJZAO010000151.1:1..19061;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_234 NZ_CAJZAO010000151.1 RefSeq gene 1 207 . + . ID=gene-LDO50_RS31580;Name=LDO50_RS31580;end_range=207,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31580;old_locus_tag=BVI1335_2340001;partial=true;start_range=.,1 NZ_CAJZAO010000151.1 Protein Homology CDS 1 207 . + 1 ID=cds-WP_443797783.1;Parent=gene-LDO50_RS31580;Dbxref=GenBank:WP_443797783.1;Name=WP_443797783.1;end_range=207,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401751.1;locus_tag=LDO50_RS31580;partial=true;product=DnaA ATPase domain-containing protein;protein_id=WP_443797783.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000151.1 RefSeq gene 218 785 . + . ID=gene-LDO50_RS15235;Name=LDO50_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15235;old_locus_tag=BVI1335_2340002;partial=true;start_range=.,218 NZ_CAJZAO010000151.1 Protein Homology CDS 218 785 . + 1 ID=cds-WP_443797782.1;Parent=gene-LDO50_RS15235;Dbxref=GenBank:WP_443797782.1;Name=WP_443797782.1;Ontology_term=GO:0006260,GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA replication|0006260||IEA,DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401751.1;locus_tag=LDO50_RS15235;partial=true;product=chromosomal replication initiator protein DnaA;protein_id=WP_443797782.1;start_range=.,218;transl_table=11 NZ_CAJZAO010000151.1 RefSeq gene 954 2060 . + . ID=gene-LDO50_RS15240;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=LDO50_RS15240;old_locus_tag=BVI1335_2340003 NZ_CAJZAO010000151.1 Protein Homology CDS 954 2060 . + 0 ID=cds-WP_011882716.1;Parent=gene-LDO50_RS15240;Dbxref=GenBank:WP_011882716.1;Name=WP_011882716.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906826.1;locus_tag=LDO50_RS15240;product=DNA polymerase III subunit beta;protein_id=WP_011882716.1;transl_table=11 NZ_CAJZAO010000151.1 RefSeq gene 2254 4728 . + . ID=gene-LDO50_RS15245;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=LDO50_RS15245;old_locus_tag=BVI1335_2340004 NZ_CAJZAO010000151.1 Protein Homology CDS 2254 4728 . + 0 ID=cds-WP_059462169.1;Parent=gene-LDO50_RS15245;Dbxref=GenBank:WP_059462169.1;Name=WP_059462169.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906825.1;locus_tag=LDO50_RS15245;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_059462169.1;transl_table=11 NZ_CAJZAO010000151.1 RefSeq gene 5071 8193 . - . ID=gene-LDO50_RS15250;Name=LDO50_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15250;old_locus_tag=BVI1335_2340005 NZ_CAJZAO010000151.1 Protein Homology CDS 5071 8193 . - 0 ID=cds-WP_011882718.1;Parent=gene-LDO50_RS15250;Dbxref=GenBank:WP_011882718.1;Name=WP_011882718.1;Ontology_term=GO:0009307,GO:0003677,GO:0004386,GO:0005524,GO:0009035,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,type I site-specific deoxyribonuclease activity|0009035||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882718.1;locus_tag=LDO50_RS15250;product=type I restriction endonuclease subunit R;protein_id=WP_011882718.1;transl_table=11 NZ_CAJZAO010000151.1 RefSeq gene 8190 9137 . - . ID=gene-LDO50_RS15255;Name=LDO50_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15255;old_locus_tag=BVI1335_2340006 NZ_CAJZAO010000151.1 Protein Homology CDS 8190 9137 . - 0 ID=cds-WP_081064077.1;Parent=gene-LDO50_RS15255;Dbxref=GenBank:WP_081064077.1;Name=WP_081064077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882719.1;locus_tag=LDO50_RS15255;product=DUF4268 domain-containing protein;protein_id=WP_081064077.1;transl_table=11 NZ_CAJZAO010000151.1 RefSeq gene 9134 10423 . - . ID=gene-LDO50_RS15260;Name=LDO50_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15260;old_locus_tag=BVI1335_2340008 NZ_CAJZAO010000151.1 Protein Homology CDS 9134 10423 . - 0 ID=cds-WP_081064078.1;Parent=gene-LDO50_RS15260;Dbxref=GenBank:WP_081064078.1;Name=WP_081064078.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013579.6;locus_tag=LDO50_RS15260;product=restriction endonuclease subunit S;protein_id=WP_081064078.1;transl_table=11 NZ_CAJZAO010000151.1 RefSeq gene 10413 11999 . - . ID=gene-LDO50_RS15265;Name=LDO50_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15265;old_locus_tag=BVI1335_2340009 NZ_CAJZAO010000151.1 Protein Homology CDS 10413 11999 . - 0 ID=cds-WP_011882720.1;Parent=gene-LDO50_RS15265;Dbxref=GenBank:WP_011882720.1;Name=WP_011882720.1;Ontology_term=GO:0009307,GO:0003677,GO:0008168,GO:0009007,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013105009.1;locus_tag=LDO50_RS15265;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_011882720.1;transl_table=11 NZ_CAJZAO010000151.1 RefSeq gene 12333 12620 . - . ID=gene-LDO50_RS15270;Name=LDO50_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15270;old_locus_tag=BVI1335_2340011 NZ_CAJZAO010000151.1 Protein Homology CDS 12333 12620 . - 0 ID=cds-WP_043290569.1;Parent=gene-LDO50_RS15270;Dbxref=GenBank:WP_043290569.1;Name=WP_043290569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882721.1;locus_tag=LDO50_RS15270;product=DUF6471 domain-containing protein;protein_id=WP_043290569.1;transl_table=11 NZ_CAJZAO010000151.1 RefSeq gene 12866 13636 . + . ID=gene-LDO50_RS15275;Name=LDO50_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15275;old_locus_tag=BVI1335_2340012 NZ_CAJZAO010000151.1 Protein Homology CDS 12866 13636 . + 0 ID=cds-WP_224019849.1;Parent=gene-LDO50_RS15275;Dbxref=GenBank:WP_224019849.1;Name=WP_224019849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882722.1;locus_tag=LDO50_RS15275;product=hypothetical protein;protein_id=WP_224019849.1;transl_table=11 NZ_CAJZAO010000151.1 RefSeq gene 13633 14382 . + . ID=gene-LDO50_RS15280;Name=LDO50_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15280;old_locus_tag=BVI1335_2340013 NZ_CAJZAO010000151.1 GeneMarkS-2+ CDS 13633 14382 . + 0 ID=cds-WP_224019850.1;Parent=gene-LDO50_RS15280;Dbxref=GenBank:WP_224019850.1;Name=WP_224019850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS15280;product=hypothetical protein;protein_id=WP_224019850.1;transl_table=11 NZ_CAJZAO010000151.1 RefSeq gene 14434 15972 . - . ID=gene-LDO50_RS15285;Name=LDO50_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15285;old_locus_tag=BVI1335_2340014 NZ_CAJZAO010000151.1 Protein Homology CDS 14434 15972 . - 0 ID=cds-WP_224019851.1;Parent=gene-LDO50_RS15285;Dbxref=GenBank:WP_224019851.1;Name=WP_224019851.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218041.1;locus_tag=LDO50_RS15285;product=IS3-like element ISBmu11 family transposase;protein_id=WP_224019851.1;transl_table=11 NZ_CAJZAO010000151.1 RefSeq pseudogene 16038 16271 . + . ID=gene-LDO50_RS15290;Name=LDO50_RS15290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS15290;old_locus_tag=BVI1335_2340015;partial=true;pseudo=true;start_range=.,16038 NZ_CAJZAO010000151.1 Protein Homology CDS 16038 16271 . + 0 ID=cds-LDO50_RS15290;Parent=gene-LDO50_RS15290;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494158.1;locus_tag=LDO50_RS15290;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,16038;transl_table=11 NZ_CAJZAO010000151.1 RefSeq gene 16402 16623 . - . ID=gene-LDO50_RS15295;Name=LDO50_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15295;old_locus_tag=BVI1335_2340016 NZ_CAJZAO010000151.1 Protein Homology CDS 16402 16623 . - 0 ID=cds-WP_224019852.1;Parent=gene-LDO50_RS15295;Dbxref=GenBank:WP_224019852.1;Name=WP_224019852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012432984.1;locus_tag=LDO50_RS15295;product=hypothetical protein;protein_id=WP_224019852.1;transl_table=11 NZ_CAJZAO010000151.1 RefSeq gene 17058 18020 . - . ID=gene-LDO50_RS15300;Name=LDO50_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15300 NZ_CAJZAO010000151.1 Protein Homology CDS 17058 18020 . - 0 ID=cds-WP_224019853.1;Parent=gene-LDO50_RS15300;Dbxref=GenBank:WP_224019853.1;Name=WP_224019853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011695164.1;locus_tag=LDO50_RS15300;product=T6SS immunity protein Tli4 family protein;protein_id=WP_224019853.1;transl_table=11 NZ_CAJZAO010000151.1 RefSeq gene 18513 18794 . + . ID=gene-LDO50_RS15305;Name=LDO50_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15305;old_locus_tag=BVI1335_2340023 NZ_CAJZAO010000151.1 Protein Homology CDS 18513 18794 . + 0 ID=cds-WP_043290584.1;Parent=gene-LDO50_RS15305;Dbxref=GenBank:WP_043290584.1;Name=WP_043290584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496041.1;locus_tag=LDO50_RS15305;product=hypothetical protein;protein_id=WP_043290584.1;transl_table=11 ##sequence-region NZ_CAJZAO010000152.1 1 7109 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000152.1 RefSeq region 1 7109 . + . ID=NZ_CAJZAO010000152.1:1..7109;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_235 NZ_CAJZAO010000152.1 RefSeq gene 217 1695 . + . ID=gene-LDO50_RS15310;Name=LDO50_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15310;old_locus_tag=BVI1335_2350001 NZ_CAJZAO010000152.1 Protein Homology CDS 217 1695 . + 0 ID=cds-WP_014724173.1;Parent=gene-LDO50_RS15310;Dbxref=GenBank:WP_014724173.1;Name=WP_014724173.1;Ontology_term=GO:0006811,GO:0015802,GO:0015288,GO:0009279,GO:0019867,GO:0046930;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,outer membrane|0019867||IEA,pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,basic amino acid transport|0015802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900821.1;locus_tag=LDO50_RS15310;product=OprD family porin;protein_id=WP_014724173.1;transl_table=11 NZ_CAJZAO010000152.1 RefSeq gene 1766 2758 . - . ID=gene-LDO50_RS15315;Name=LDO50_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15315;old_locus_tag=BVI1335_2350002 NZ_CAJZAO010000152.1 Protein Homology CDS 1766 2758 . - 0 ID=cds-WP_011881045.1;Parent=gene-LDO50_RS15315;Dbxref=GenBank:WP_011881045.1;Name=WP_011881045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331030.1;locus_tag=LDO50_RS15315;product=DedA family protein/thiosulfate sulfurtransferase GlpE;protein_id=WP_011881045.1;transl_table=11 NZ_CAJZAO010000152.1 RefSeq gene 2921 3190 . - . ID=gene-LDO50_RS15320;Name=LDO50_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15320;old_locus_tag=BVI1335_2350003 NZ_CAJZAO010000152.1 Protein Homology CDS 2921 3190 . - 0 ID=cds-WP_011881044.1;Parent=gene-LDO50_RS15320;Dbxref=GenBank:WP_011881044.1;Name=WP_011881044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480304.1;locus_tag=LDO50_RS15320;product=hypothetical protein;protein_id=WP_011881044.1;transl_table=11 NZ_CAJZAO010000152.1 RefSeq gene 3426 5735 . - . ID=gene-LDO50_RS15325;Name=LDO50_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15325;old_locus_tag=BVI1335_2350004 NZ_CAJZAO010000152.1 Protein Homology CDS 3426 5735 . - 0 ID=cds-WP_034193409.1;Parent=gene-LDO50_RS15325;Dbxref=GenBank:WP_034193409.1;Name=WP_034193409.1;Ontology_term=GO:0034480;gbkey=CDS;go_function=phosphatidylcholine phospholipase C activity|0034480||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367063.1;locus_tag=LDO50_RS15325;product=phosphocholine-specific phospholipase C;protein_id=WP_034193409.1;transl_table=11 NZ_CAJZAO010000152.1 RefSeq gene 6226 6432 . - . ID=gene-LDO50_RS15330;Name=LDO50_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15330 NZ_CAJZAO010000152.1 GeneMarkS-2+ CDS 6226 6432 . - 0 ID=cds-WP_014724170.1;Parent=gene-LDO50_RS15330;Dbxref=GenBank:WP_014724170.1;Name=WP_014724170.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS15330;product=hypothetical protein;protein_id=WP_014724170.1;transl_table=11 NZ_CAJZAO010000152.1 RefSeq gene 6460 7109 . + . ID=gene-LDO50_RS15335;Name=LDO50_RS15335;end_range=7109,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15335;partial=true NZ_CAJZAO010000152.1 Protein Homology CDS 6460 7109 . + 0 ID=cds-WP_224019854.1;Parent=gene-LDO50_RS15335;Dbxref=GenBank:WP_224019854.1;Name=WP_224019854.1;Ontology_term=GO:0015035;end_range=7109,.;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494349.1;locus_tag=LDO50_RS15335;partial=true;product=thioredoxin family protein;protein_id=WP_224019854.1;transl_table=11 ##sequence-region NZ_CAJZAO010000153.1 1 21526 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000153.1 RefSeq region 1 21526 . + . ID=NZ_CAJZAO010000153.1:1..21526;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_236 NZ_CAJZAO010000153.1 RefSeq pseudogene 1 207 . + . ID=gene-LDO50_RS15340;Name=LDO50_RS15340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS15340;old_locus_tag=BVI1335_2360001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000153.1 Protein Homology CDS 1 207 . + 0 ID=cds-LDO50_RS15340;Parent=gene-LDO50_RS15340;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409583.1;locus_tag=LDO50_RS15340;partial=true;product=MFS transporter;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000153.1 RefSeq gene 292 1434 . - . ID=gene-LDO50_RS15345;Name=LDO50_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15345;old_locus_tag=BVI1335_2360002 NZ_CAJZAO010000153.1 Protein Homology CDS 292 1434 . - 0 ID=cds-WP_011882928.1;Parent=gene-LDO50_RS15345;Dbxref=GenBank:WP_011882928.1;Name=WP_011882928.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195762.1;locus_tag=LDO50_RS15345;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_011882928.1;transl_table=11 NZ_CAJZAO010000153.1 RefSeq gene 1925 3013 . - . ID=gene-LDO50_RS15350;Name=LDO50_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15350;old_locus_tag=BVI1335_2360004 NZ_CAJZAO010000153.1 Protein Homology CDS 1925 3013 . - 0 ID=cds-WP_224019855.1;Parent=gene-LDO50_RS15350;Dbxref=GenBank:WP_224019855.1;Name=WP_224019855.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497250.1;locus_tag=LDO50_RS15350;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_224019855.1;transl_table=11 NZ_CAJZAO010000153.1 RefSeq gene 3378 4526 . + . ID=gene-LDO50_RS15355;Name=LDO50_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15355;old_locus_tag=BVI1335_2360005 NZ_CAJZAO010000153.1 Protein Homology CDS 3378 4526 . + 0 ID=cds-WP_224019856.1;Parent=gene-LDO50_RS15355;Dbxref=GenBank:WP_224019856.1;Name=WP_224019856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884868.1;locus_tag=LDO50_RS15355;product=hypothetical protein;protein_id=WP_224019856.1;transl_table=11 NZ_CAJZAO010000153.1 RefSeq gene 4702 4914 . - . ID=gene-LDO50_RS15360;Name=LDO50_RS15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15360;old_locus_tag=BVI1335_2360006 NZ_CAJZAO010000153.1 Protein Homology CDS 4702 4914 . - 0 ID=cds-WP_011884867.1;Parent=gene-LDO50_RS15360;Dbxref=GenBank:WP_011884867.1;Name=WP_011884867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213326.1;locus_tag=LDO50_RS15360;product=hypothetical protein;protein_id=WP_011884867.1;transl_table=11 NZ_CAJZAO010000153.1 RefSeq gene 5036 5473 . - . ID=gene-LDO50_RS15365;Name=LDO50_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15365;old_locus_tag=BVI1335_2360007 NZ_CAJZAO010000153.1 Protein Homology CDS 5036 5473 . - 0 ID=cds-WP_034193134.1;Parent=gene-LDO50_RS15365;Dbxref=GenBank:WP_034193134.1;Name=WP_034193134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897013.1;locus_tag=LDO50_RS15365;product=hypothetical protein;protein_id=WP_034193134.1;transl_table=11 NZ_CAJZAO010000153.1 RefSeq gene 5899 6603 . + . ID=gene-LDO50_RS15370;Name=LDO50_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15370;old_locus_tag=BVI1335_2360008 NZ_CAJZAO010000153.1 Protein Homology CDS 5899 6603 . + 0 ID=cds-WP_011884865.1;Parent=gene-LDO50_RS15370;Dbxref=GenBank:WP_011884865.1;Name=WP_011884865.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213332.1;locus_tag=LDO50_RS15370;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_011884865.1;transl_table=11 NZ_CAJZAO010000153.1 RefSeq gene 6782 7243 . - . ID=gene-LDO50_RS31090;Name=LDO50_RS31090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31090 NZ_CAJZAO010000153.1 Protein Homology CDS 6782 7243 . - 0 ID=cds-WP_253074462.1;Parent=gene-LDO50_RS31090;Dbxref=GenBank:WP_253074462.1;Name=WP_253074462.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545415.1;locus_tag=LDO50_RS31090;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_253074462.1;transl_table=11 NZ_CAJZAO010000153.1 RefSeq pseudogene 7265 7525 . - . ID=gene-LDO50_RS31095;Name=LDO50_RS31095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31095;partial=true;pseudo=true;start_range=.,7265 NZ_CAJZAO010000153.1 Protein Homology CDS 7265 7525 . - 0 ID=cds-LDO50_RS31095;Parent=gene-LDO50_RS31095;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004555344.1;locus_tag=LDO50_RS31095;partial=true;product=RBBP9/YdeN family alpha/beta hydrolase;pseudo=true;start_range=.,7265;transl_table=11 NZ_CAJZAO010000153.1 RefSeq gene 7769 8206 . + . ID=gene-LDO50_RS15380;Name=LDO50_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15380;old_locus_tag=BVI1335_2360010 NZ_CAJZAO010000153.1 Protein Homology CDS 7769 8206 . + 0 ID=cds-WP_011886199.1;Parent=gene-LDO50_RS15380;Dbxref=GenBank:WP_011886199.1;Name=WP_011886199.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893323.1;locus_tag=LDO50_RS15380;product=VOC family protein;protein_id=WP_011886199.1;transl_table=11 NZ_CAJZAO010000153.1 RefSeq gene 8211 9152 . + . ID=gene-LDO50_RS15385;Name=LDO50_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15385;old_locus_tag=BVI1335_2360011 NZ_CAJZAO010000153.1 Protein Homology CDS 8211 9152 . + 0 ID=cds-WP_046424092.1;Parent=gene-LDO50_RS15385;Dbxref=GenBank:WP_046424092.1;Name=WP_046424092.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214267.1;locus_tag=LDO50_RS15385;product=2-hydroxyacid dehydrogenase;protein_id=WP_046424092.1;transl_table=11 NZ_CAJZAO010000153.1 RefSeq gene 9182 10114 . + . ID=gene-LDO50_RS15390;Name=LDO50_RS15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15390;old_locus_tag=BVI1335_2360012 NZ_CAJZAO010000153.1 Protein Homology CDS 9182 10114 . + 0 ID=cds-WP_011886201.1;Parent=gene-LDO50_RS15390;Dbxref=GenBank:WP_011886201.1;Name=WP_011886201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886201.1;locus_tag=LDO50_RS15390;product=hydroxymethylglutaryl-CoA lyase;protein_id=WP_011886201.1;transl_table=11 NZ_CAJZAO010000153.1 RefSeq gene 10138 10644 . + . ID=gene-LDO50_RS15395;Name=LDO50_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15395;old_locus_tag=BVI1335_2360013 NZ_CAJZAO010000153.1 Protein Homology CDS 10138 10644 . + 0 ID=cds-WP_011886202.1;Parent=gene-LDO50_RS15395;Dbxref=GenBank:WP_011886202.1;Name=WP_011886202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525946.1;locus_tag=LDO50_RS15395;product=YbaK/EbsC family protein;protein_id=WP_011886202.1;transl_table=11 NZ_CAJZAO010000153.1 RefSeq gene 10641 10847 . + . ID=gene-LDO50_RS15400;Name=LDO50_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15400;old_locus_tag=BVI1335_2360014 NZ_CAJZAO010000153.1 Protein Homology CDS 10641 10847 . + 0 ID=cds-WP_011886203.1;Parent=gene-LDO50_RS15400;Dbxref=GenBank:WP_011886203.1;Name=WP_011886203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895855.1;locus_tag=LDO50_RS15400;product=DUF1289 domain-containing protein;protein_id=WP_011886203.1;transl_table=11 NZ_CAJZAO010000153.1 RefSeq gene 11139 12041 . - . ID=gene-LDO50_RS15405;Name=LDO50_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15405;old_locus_tag=BVI1335_2360015 NZ_CAJZAO010000153.1 Protein Homology CDS 11139 12041 . - 0 ID=cds-WP_059668227.1;Parent=gene-LDO50_RS15405;Dbxref=GenBank:WP_059668227.1;Name=WP_059668227.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546366.1;locus_tag=LDO50_RS15405;product=DMT family transporter;protein_id=WP_059668227.1;transl_table=11 NZ_CAJZAO010000153.1 RefSeq gene 12154 12645 . + . ID=gene-LDO50_RS15410;Name=LDO50_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15410;old_locus_tag=BVI1335_2360016 NZ_CAJZAO010000153.1 Protein Homology CDS 12154 12645 . + 0 ID=cds-WP_200092372.1;Parent=gene-LDO50_RS15410;Dbxref=GenBank:WP_200092372.1;Name=WP_200092372.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495467.1;locus_tag=LDO50_RS15410;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_200092372.1;transl_table=11 NZ_CAJZAO010000153.1 RefSeq gene 12748 13644 . - . ID=gene-LDO50_RS15415;Name=LDO50_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15415;old_locus_tag=BVI1335_2360018 NZ_CAJZAO010000153.1 Protein Homology CDS 12748 13644 . - 0 ID=cds-WP_011886206.1;Parent=gene-LDO50_RS15415;Dbxref=GenBank:WP_011886206.1;Name=WP_011886206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488641.1;locus_tag=LDO50_RS15415;product=alpha/beta fold hydrolase;protein_id=WP_011886206.1;transl_table=11 NZ_CAJZAO010000153.1 RefSeq gene 13919 14878 . + . ID=gene-LDO50_RS15420;Name=LDO50_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15420;old_locus_tag=BVI1335_2360019 NZ_CAJZAO010000153.1 Protein Homology CDS 13919 14878 . + 0 ID=cds-WP_224019858.1;Parent=gene-LDO50_RS15420;Dbxref=GenBank:WP_224019858.1;Name=WP_224019858.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488640.1;locus_tag=LDO50_RS15420;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_224019858.1;transl_table=11 NZ_CAJZAO010000153.1 RefSeq gene 15082 16041 . - . ID=gene-LDO50_RS15425;Name=LDO50_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15425;old_locus_tag=BVI1335_2360020 NZ_CAJZAO010000153.1 Protein Homology CDS 15082 16041 . - 0 ID=cds-WP_011886208.1;Parent=gene-LDO50_RS15425;Dbxref=GenBank:WP_011886208.1;Name=WP_011886208.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886208.1;locus_tag=LDO50_RS15425;product=LysR family transcriptional regulator;protein_id=WP_011886208.1;transl_table=11 NZ_CAJZAO010000153.1 RefSeq gene 16219 17295 . - . ID=gene-LDO50_RS15430;Name=LDO50_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15430;old_locus_tag=BVI1335_2360021 NZ_CAJZAO010000153.1 Protein Homology CDS 16219 17295 . - 0 ID=cds-WP_034192511.1;Parent=gene-LDO50_RS15430;Dbxref=GenBank:WP_034192511.1;Name=WP_034192511.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407148.1;locus_tag=LDO50_RS15430;product=porin;protein_id=WP_034192511.1;transl_table=11 NZ_CAJZAO010000153.1 RefSeq gene 17636 18139 . - . ID=gene-LDO50_RS15435;Name=LDO50_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15435;old_locus_tag=BVI1335_2360022 NZ_CAJZAO010000153.1 Protein Homology CDS 17636 18139 . - 0 ID=cds-WP_034192510.1;Parent=gene-LDO50_RS15435;Dbxref=GenBank:WP_034192510.1;Name=WP_034192510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353418.1;locus_tag=LDO50_RS15435;product=hypothetical protein;protein_id=WP_034192510.1;transl_table=11 NZ_CAJZAO010000153.1 RefSeq gene 18496 19533 . + . ID=gene-LDO50_RS15440;Name=LDO50_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15440;old_locus_tag=BVI1335_2360024 NZ_CAJZAO010000153.1 Protein Homology CDS 18496 19533 . + 0 ID=cds-WP_011886211.1;Parent=gene-LDO50_RS15440;Dbxref=GenBank:WP_011886211.1;Name=WP_011886211.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004545944.1;locus_tag=LDO50_RS15440;product=bile acid:sodium symporter family protein;protein_id=WP_011886211.1;transl_table=11 NZ_CAJZAO010000153.1 RefSeq gene 19793 21526 . + . ID=gene-LDO50_RS15445;Name=LDO50_RS15445;end_range=21526,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15445;partial=true NZ_CAJZAO010000153.1 Protein Homology CDS 19793 21526 . + 0 ID=cds-WP_224019859.1;Parent=gene-LDO50_RS15445;Dbxref=GenBank:WP_224019859.1;Name=WP_224019859.1;end_range=21526,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546373.1;locus_tag=LDO50_RS15445;partial=true;product=EAL domain-containing protein;protein_id=WP_224019859.1;transl_table=11 ##sequence-region NZ_CAJZAO010000154.1 1 10358 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000154.1 RefSeq region 1 10358 . + . ID=NZ_CAJZAO010000154.1:1..10358;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_237 NZ_CAJZAO010000154.1 RefSeq gene 1 3732 . + . ID=gene-LDO50_RS30845;Name=LDO50_RS30845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30845;old_locus_tag=BVI1335_2370001;partial=true;start_range=.,1 NZ_CAJZAO010000154.1 Protein Homology CDS 1 3732 . + 0 ID=cds-WP_290370730.1;Parent=gene-LDO50_RS30845;Dbxref=GenBank:WP_290370730.1;Name=WP_290370730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723407.1;locus_tag=LDO50_RS30845;partial=true;product=DNA translocase FtsK;protein_id=WP_290370730.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000154.1 RefSeq gene 3864 5111 . - . ID=gene-LDO50_RS15460;Name=LDO50_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15460;old_locus_tag=BVI1335_2370002 NZ_CAJZAO010000154.1 Protein Homology CDS 3864 5111 . - 0 ID=cds-WP_080938684.1;Parent=gene-LDO50_RS15460;Dbxref=GenBank:WP_080938684.1;Name=WP_080938684.1;Ontology_term=GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896430.1;locus_tag=LDO50_RS15460;product=lactonase family protein;protein_id=WP_080938684.1;transl_table=11 NZ_CAJZAO010000154.1 RefSeq gene 5277 7106 . + . ID=gene-LDO50_RS15465;Name=LDO50_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15465;old_locus_tag=BVI1335_2370003 NZ_CAJZAO010000154.1 Protein Homology CDS 5277 7106 . + 0 ID=cds-WP_059461269.1;Parent=gene-LDO50_RS15465;Dbxref=GenBank:WP_059461269.1;Name=WP_059461269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331492.1;locus_tag=LDO50_RS15465;product=glycoside hydrolase family 15 protein;protein_id=WP_059461269.1;transl_table=11 NZ_CAJZAO010000154.1 RefSeq gene 7339 8859 . + . ID=gene-LDO50_RS15470;Name=LDO50_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15470;old_locus_tag=BVI1335_2370004 NZ_CAJZAO010000154.1 Protein Homology CDS 7339 8859 . + 0 ID=cds-WP_011885609.1;Parent=gene-LDO50_RS15470;Dbxref=GenBank:WP_011885609.1;Name=WP_011885609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545868.1;locus_tag=LDO50_RS15470;product=polyhydroxyalkanoate depolymerase;protein_id=WP_011885609.1;transl_table=11 NZ_CAJZAO010000154.1 RefSeq gene 8962 9594 . - . ID=gene-LDO50_RS15475;Name=LDO50_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15475;old_locus_tag=BVI1335_2370006 NZ_CAJZAO010000154.1 Protein Homology CDS 8962 9594 . - 0 ID=cds-WP_011885610.1;Parent=gene-LDO50_RS15475;Dbxref=GenBank:WP_011885610.1;Name=WP_011885610.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185974.1;locus_tag=LDO50_RS15475;product=TetR family transcriptional regulator;protein_id=WP_011885610.1;transl_table=11 NZ_CAJZAO010000154.1 RefSeq gene 9752 10358 . + . ID=gene-LDO50_RS15480;Name=rsxB;end_range=10358,.;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=LDO50_RS15480;partial=true NZ_CAJZAO010000154.1 Protein Homology CDS 9752 10358 . + 0 ID=cds-WP_224019861.1;Parent=gene-LDO50_RS15480;Dbxref=GenBank:WP_224019861.1;Name=WP_224019861.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;end_range=10358,.;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478197.1;locus_tag=LDO50_RS15480;partial=true;product=electron transport complex subunit RsxB;protein_id=WP_224019861.1;transl_table=11 ##sequence-region NZ_CAJZAO010000155.1 1 29889 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000155.1 RefSeq region 1 29889 . + . ID=NZ_CAJZAO010000155.1:1..29889;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_238 NZ_CAJZAO010000155.1 RefSeq gene 1 946 . + . ID=gene-LDO50_RS15485;Name=LDO50_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15485;old_locus_tag=BVI1335_2380001;partial=true;start_range=.,1 NZ_CAJZAO010000155.1 Protein Homology CDS 1 946 . + 1 ID=cds-WP_224019862.1;Parent=gene-LDO50_RS15485;Dbxref=GenBank:WP_224019862.1;Name=WP_224019862.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411378.1;locus_tag=LDO50_RS15485;partial=true;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_224019862.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000155.1 RefSeq gene 1135 2421 . + . ID=gene-LDO50_RS15490;Name=LDO50_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15490;old_locus_tag=BVI1335_2380003 NZ_CAJZAO010000155.1 Protein Homology CDS 1135 2421 . + 0 ID=cds-WP_059734973.1;Parent=gene-LDO50_RS15490;Dbxref=GenBank:WP_059734973.1;Name=WP_059734973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338513.1;locus_tag=LDO50_RS15490;product=DUF445 domain-containing protein;protein_id=WP_059734973.1;transl_table=11 NZ_CAJZAO010000155.1 RefSeq gene 2513 2812 . - . ID=gene-LDO50_RS15495;Name=LDO50_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15495;old_locus_tag=BVI1335_2380004 NZ_CAJZAO010000155.1 Protein Homology CDS 2513 2812 . - 0 ID=cds-WP_011881499.1;Parent=gene-LDO50_RS15495;Dbxref=GenBank:WP_011881499.1;Name=WP_011881499.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089041.1;locus_tag=LDO50_RS15495;product=addiction module antidote protein;protein_id=WP_011881499.1;transl_table=11 NZ_CAJZAO010000155.1 RefSeq gene 2816 3133 . - . ID=gene-LDO50_RS15500;Name=LDO50_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15500;old_locus_tag=BVI1335_2380005 NZ_CAJZAO010000155.1 Protein Homology CDS 2816 3133 . - 0 ID=cds-WP_014724585.1;Parent=gene-LDO50_RS15500;Dbxref=GenBank:WP_014724585.1;Name=WP_014724585.1;Ontology_term=GO:0008219,GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724585.1;locus_tag=LDO50_RS15500;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_014724585.1;transl_table=11 NZ_CAJZAO010000155.1 RefSeq gene 3511 5151 . + . ID=gene-LDO50_RS15505;Name=LDO50_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15505;old_locus_tag=BVI1335_2380007 NZ_CAJZAO010000155.1 Protein Homology CDS 3511 5151 . + 0 ID=cds-WP_224019863.1;Parent=gene-LDO50_RS15505;Dbxref=GenBank:WP_224019863.1;Name=WP_224019863.1;Ontology_term=GO:0000287,GO:0003824,GO:0030976;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009978184.1;locus_tag=LDO50_RS15505;product=acetolactate synthase large subunit;protein_id=WP_224019863.1;transl_table=11 NZ_CAJZAO010000155.1 RefSeq gene 5180 6613 . + . ID=gene-LDO50_RS15510;Name=LDO50_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15510;old_locus_tag=BVI1335_2380008 NZ_CAJZAO010000155.1 Protein Homology CDS 5180 6613 . + 0 ID=cds-WP_011881502.1;Parent=gene-LDO50_RS15510;Dbxref=GenBank:WP_011881502.1;Name=WP_011881502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330254.1;locus_tag=LDO50_RS15510;product=aldehyde dehydrogenase family protein;protein_id=WP_011881502.1;transl_table=11 NZ_CAJZAO010000155.1 RefSeq gene 6922 8505 . + . ID=gene-LDO50_RS15515;Name=LDO50_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15515;old_locus_tag=BVI1335_2380009 NZ_CAJZAO010000155.1 Protein Homology CDS 6922 8505 . + 0 ID=cds-WP_045578202.1;Parent=gene-LDO50_RS15515;Dbxref=GenBank:WP_045578202.1;Name=WP_045578202.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365547.1;locus_tag=LDO50_RS15515;product=Na+/H+ antiporter;protein_id=WP_045578202.1;transl_table=11 NZ_CAJZAO010000155.1 RefSeq gene 9103 10194 . + . ID=gene-LDO50_RS15520;Name=LDO50_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15520;old_locus_tag=BVI1335_2380012 NZ_CAJZAO010000155.1 Protein Homology CDS 9103 10194 . + 0 ID=cds-WP_011881504.1;Parent=gene-LDO50_RS15520;Dbxref=GenBank:WP_011881504.1;Name=WP_011881504.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493172.1;locus_tag=LDO50_RS15520;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_011881504.1;transl_table=11 NZ_CAJZAO010000155.1 RefSeq gene 10311 11987 . + . ID=gene-LDO50_RS15525;Name=LDO50_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15525;old_locus_tag=BVI1335_2380013 NZ_CAJZAO010000155.1 Protein Homology CDS 10311 11987 . + 0 ID=cds-WP_041494085.1;Parent=gene-LDO50_RS15525;Dbxref=GenBank:WP_041494085.1;Name=WP_041494085.1;Ontology_term=GO:0006935;gbkey=CDS;go_process=chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404210.1;locus_tag=LDO50_RS15525;product=methyl-accepting chemotaxis protein;protein_id=WP_041494085.1;transl_table=11 NZ_CAJZAO010000155.1 RefSeq gene 11984 12496 . + . ID=gene-LDO50_RS15530;Name=LDO50_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15530;old_locus_tag=BVI1335_2380014 NZ_CAJZAO010000155.1 Protein Homology CDS 11984 12496 . + 0 ID=cds-WP_011881506.1;Parent=gene-LDO50_RS15530;Dbxref=GenBank:WP_011881506.1;Name=WP_011881506.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724591.1;locus_tag=LDO50_RS15530;product=chemotaxis protein CheW;protein_id=WP_011881506.1;transl_table=11 NZ_CAJZAO010000155.1 RefSeq gene 12493 14010 . + . ID=gene-LDO50_RS15535;Name=LDO50_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15535;old_locus_tag=BVI1335_2380015 NZ_CAJZAO010000155.1 Protein Homology CDS 12493 14010 . + 0 ID=cds-WP_224019864.1;Parent=gene-LDO50_RS15535;Dbxref=GenBank:WP_224019864.1;Name=WP_224019864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724592.1;locus_tag=LDO50_RS15535;product=CheR family methyltransferase;protein_id=WP_224019864.1;transl_table=11 NZ_CAJZAO010000155.1 RefSeq gene 14056 14760 . + . ID=gene-LDO50_RS15540;Name=LDO50_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15540;old_locus_tag=BVI1335_2380017 NZ_CAJZAO010000155.1 Protein Homology CDS 14056 14760 . + 0 ID=cds-WP_034195055.1;Parent=gene-LDO50_RS15540;Dbxref=GenBank:WP_034195055.1;Name=WP_034195055.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398022.1;locus_tag=LDO50_RS15540;product=chemotaxis protein CheW;protein_id=WP_034195055.1;transl_table=11 NZ_CAJZAO010000155.1 RefSeq gene 14757 17279 . + . ID=gene-LDO50_RS15545;Name=LDO50_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15545;old_locus_tag=BVI1335_2380016 NZ_CAJZAO010000155.1 Protein Homology CDS 14757 17279 . + 0 ID=cds-WP_224019865.1;Parent=gene-LDO50_RS15545;Dbxref=GenBank:WP_224019865.1;Name=WP_224019865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881509.1;locus_tag=LDO50_RS15545;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_224019865.1;transl_table=11 NZ_CAJZAO010000155.1 RefSeq gene 17276 18295 . + . ID=gene-LDO50_RS15550;Name=LDO50_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15550;old_locus_tag=BVI1335_2380018 NZ_CAJZAO010000155.1 Protein Homology CDS 17276 18295 . + 0 ID=cds-WP_059462392.1;Parent=gene-LDO50_RS15550;Dbxref=GenBank:WP_059462392.1;Name=WP_059462392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479514.1;locus_tag=LDO50_RS15550;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=WP_059462392.1;transl_table=11 NZ_CAJZAO010000155.1 cmsearch riboswitch 18364 18469 . + . ID=id-NZ_CAJZAO010000155.1:18364..18469;Dbxref=RFAM:RF01734;Note=Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride%3B They are found in a wide variety of bacteria and archaea;bound_moiety=fluoride;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAO010000155.1 RefSeq gene 18550 19791 . + . ID=gene-LDO50_RS15555;Name=LDO50_RS15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15555;old_locus_tag=BVI1335_2380019 NZ_CAJZAO010000155.1 Protein Homology CDS 18550 19791 . + 0 ID=cds-WP_011881511.1;Parent=gene-LDO50_RS15555;Dbxref=GenBank:WP_011881511.1;Name=WP_011881511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487801.1;locus_tag=LDO50_RS15555;product=voltage-gated chloride channel family protein;protein_id=WP_011881511.1;transl_table=11 NZ_CAJZAO010000155.1 RefSeq gene 19873 20586 . - . ID=gene-LDO50_RS15560;Name=LDO50_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15560;old_locus_tag=BVI1335_2380020 NZ_CAJZAO010000155.1 Protein Homology CDS 19873 20586 . - 0 ID=cds-WP_011881512.1;Parent=gene-LDO50_RS15560;Dbxref=GenBank:WP_011881512.1;Name=WP_011881512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881512.1;locus_tag=LDO50_RS15560;product=riboflavin synthase;protein_id=WP_011881512.1;transl_table=11 NZ_CAJZAO010000155.1 RefSeq gene 20724 22586 . - . ID=gene-LDO50_RS15565;Name=LDO50_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15565;old_locus_tag=BVI1335_2380021 NZ_CAJZAO010000155.1 Protein Homology CDS 20724 22586 . - 0 ID=cds-WP_059462391.1;Parent=gene-LDO50_RS15565;Dbxref=GenBank:WP_059462391.1;Name=WP_059462391.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881513.1;locus_tag=LDO50_RS15565;product=ABC transporter ATP-binding protein;protein_id=WP_059462391.1;transl_table=11 NZ_CAJZAO010000155.1 RefSeq gene 23107 23988 . + . ID=gene-LDO50_RS15570;Name=LDO50_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15570;old_locus_tag=BVI1335_2380022 NZ_CAJZAO010000155.1 Protein Homology CDS 23107 23988 . + 0 ID=cds-WP_224019866.1;Parent=gene-LDO50_RS15570;Dbxref=GenBank:WP_224019866.1;Name=WP_224019866.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753361.1;locus_tag=LDO50_RS15570;product=Dyp-type peroxidase;protein_id=WP_224019866.1;transl_table=11 NZ_CAJZAO010000155.1 RefSeq gene 24155 24556 . - . ID=gene-LDO50_RS15575;Name=LDO50_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15575;old_locus_tag=BVI1335_2380023 NZ_CAJZAO010000155.1 Protein Homology CDS 24155 24556 . - 0 ID=cds-WP_014724598.1;Parent=gene-LDO50_RS15575;Dbxref=GenBank:WP_014724598.1;Name=WP_014724598.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548217.1;locus_tag=LDO50_RS15575;product=OsmC family protein;protein_id=WP_014724598.1;transl_table=11 NZ_CAJZAO010000155.1 RefSeq gene 24849 25769 . - . ID=gene-LDO50_RS15580;Name=LDO50_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15580;old_locus_tag=BVI1335_2380024 NZ_CAJZAO010000155.1 Protein Homology CDS 24849 25769 . - 0 ID=cds-WP_224019867.1;Parent=gene-LDO50_RS15580;Dbxref=GenBank:WP_224019867.1;Name=WP_224019867.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724599.1;locus_tag=LDO50_RS15580;product=LysR family transcriptional regulator;protein_id=WP_224019867.1;transl_table=11 NZ_CAJZAO010000155.1 RefSeq gene 26206 27087 . + . ID=gene-LDO50_RS15585;Name=LDO50_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15585;old_locus_tag=BVI1335_2380025 NZ_CAJZAO010000155.1 Protein Homology CDS 26206 27087 . + 0 ID=cds-WP_224019868.1;Parent=gene-LDO50_RS15585;Dbxref=GenBank:WP_224019868.1;Name=WP_224019868.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724601.1;locus_tag=LDO50_RS15585;product=helix-turn-helix domain-containing protein;protein_id=WP_224019868.1;transl_table=11 NZ_CAJZAO010000155.1 RefSeq pseudogene 27142 28449 . + . ID=gene-LDO50_RS15590;Name=LDO50_RS15590;end_range=28449,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS15590;old_locus_tag=BVI1335_2380026;partial=true;pseudo=true NZ_CAJZAO010000155.1 Protein Homology CDS 27142 28449 . + 0 ID=cds-LDO50_RS15590;Parent=gene-LDO50_RS15590;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=28449,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493178.1;locus_tag=LDO50_RS15590;partial=true;product=Nramp family divalent metal transporter;pseudo=true;transl_table=11 NZ_CAJZAO010000155.1 RefSeq gene 28673 29889 . + . ID=gene-LDO50_RS15595;Name=LDO50_RS15595;end_range=29889,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15595;partial=true NZ_CAJZAO010000155.1 Protein Homology CDS 28673 29889 . + 0 ID=cds-WP_224019870.1;Parent=gene-LDO50_RS15595;Dbxref=GenBank:WP_224019870.1;Name=WP_224019870.1;end_range=29889,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723649.1;locus_tag=LDO50_RS15595;partial=true;product=AMP-binding protein;protein_id=WP_224019870.1;transl_table=11 ##sequence-region NZ_CAJZAO010000156.1 1 4529 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000156.1 RefSeq region 1 4529 . + . ID=NZ_CAJZAO010000156.1:1..4529;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_239 NZ_CAJZAO010000156.1 RefSeq gene 272 1471 . + . ID=gene-LDO50_RS15600;Name=LDO50_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15600;old_locus_tag=BVI1335_2390002 NZ_CAJZAO010000156.1 Protein Homology CDS 272 1471 . + 0 ID=cds-WP_069224648.1;Parent=gene-LDO50_RS15600;Dbxref=GenBank:WP_069224648.1;Name=WP_069224648.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882336.1;locus_tag=LDO50_RS15600;product=GNAT family N-acetyltransferase;protein_id=WP_069224648.1;transl_table=11 NZ_CAJZAO010000156.1 RefSeq gene 1966 3030 . + . ID=gene-LDO50_RS15605;Name=LDO50_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15605;old_locus_tag=BVI1335_2390003 NZ_CAJZAO010000156.1 Protein Homology CDS 1966 3030 . + 0 ID=cds-WP_034195115.1;Parent=gene-LDO50_RS15605;Dbxref=GenBank:WP_034195115.1;Name=WP_034195115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658954.1;locus_tag=LDO50_RS15605;product=2%2C3-butanediol dehydrogenase;protein_id=WP_034195115.1;transl_table=11 NZ_CAJZAO010000156.1 RefSeq gene 3567 4223 . + . ID=gene-LDO50_RS15610;Name=LDO50_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15610;old_locus_tag=BVI1335_2390005 NZ_CAJZAO010000156.1 Protein Homology CDS 3567 4223 . + 0 ID=cds-WP_011882339.1;Parent=gene-LDO50_RS15610;Dbxref=GenBank:WP_011882339.1;Name=WP_011882339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366183.1;locus_tag=LDO50_RS15610;product=VC0807 family protein;protein_id=WP_011882339.1;transl_table=11 NZ_CAJZAO010000156.1 RefSeq pseudogene 4310 4529 . + . ID=gene-LDO50_RS15615;Name=LDO50_RS15615;end_range=4529,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS15615;partial=true;pseudo=true NZ_CAJZAO010000156.1 Protein Homology CDS 4310 4529 . + 0 ID=cds-LDO50_RS15615;Parent=gene-LDO50_RS15615;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4529,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882340.1;locus_tag=LDO50_RS15615;partial=true;product=CPBP family intramembrane glutamate endopeptidase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000157.1 1 31578 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000157.1 RefSeq region 1 31578 . + . ID=NZ_CAJZAO010000157.1:1..31578;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_24 NZ_CAJZAO010000157.1 RefSeq gene 1 370 . + . ID=gene-LDO50_RS15620;Name=LDO50_RS15620;end_range=370,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15620;old_locus_tag=BVI1335_240001;partial=true;start_range=.,1 NZ_CAJZAO010000157.1 Protein Homology CDS 1 370 . + 1 ID=cds-WP_224019875.1;Parent=gene-LDO50_RS15620;Dbxref=GenBank:WP_224019875.1;Name=WP_224019875.1;end_range=370,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185441.1;locus_tag=LDO50_RS15620;partial=true;product=YqgE/AlgH family protein;protein_id=WP_224019875.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 382 771 . + . ID=gene-LDO50_RS15625;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=LDO50_RS15625;old_locus_tag=BVI1335_240002 NZ_CAJZAO010000157.1 Protein Homology CDS 382 771 . + 0 ID=cds-WP_224023295.1;Parent=gene-LDO50_RS15625;Dbxref=GenBank:WP_224023295.1;Name=WP_224023295.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762411.1;locus_tag=LDO50_RS15625;product=Holliday junction resolvase RuvX;protein_id=WP_224023295.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 758 1273 . + . ID=gene-LDO50_RS15630;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=LDO50_RS15630;old_locus_tag=BVI1335_240003 NZ_CAJZAO010000157.1 Protein Homology CDS 758 1273 . + 0 ID=cds-WP_011883512.1;Parent=gene-LDO50_RS15630;Dbxref=GenBank:WP_011883512.1;Name=WP_011883512.1;Ontology_term=GO:0009116;gbkey=CDS;gene=pyrR;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406351.1;locus_tag=LDO50_RS15630;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_011883512.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 1348 2379 . + . ID=gene-LDO50_RS15635;Name=LDO50_RS15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15635;old_locus_tag=BVI1335_240004 NZ_CAJZAO010000157.1 Protein Homology CDS 1348 2379 . + 0 ID=cds-WP_014722549.1;Parent=gene-LDO50_RS15635;Dbxref=GenBank:WP_014722549.1;Name=WP_014722549.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600263.1;locus_tag=LDO50_RS15635;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_014722549.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 2431 3708 . + . ID=gene-LDO50_RS15640;Name=LDO50_RS15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15640;old_locus_tag=BVI1335_240005 NZ_CAJZAO010000157.1 Protein Homology CDS 2431 3708 . + 0 ID=cds-WP_059476126.1;Parent=gene-LDO50_RS15640;Dbxref=GenBank:WP_059476126.1;Name=WP_059476126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897896.1;locus_tag=LDO50_RS15640;product=dihydroorotase;protein_id=WP_059476126.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 3728 4585 . + . ID=gene-LDO50_RS15645;Name=LDO50_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15645;old_locus_tag=BVI1335_240006 NZ_CAJZAO010000157.1 Protein Homology CDS 3728 4585 . + 0 ID=cds-WP_034194492.1;Parent=gene-LDO50_RS15645;Dbxref=GenBank:WP_034194492.1;Name=WP_034194492.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485105.1;locus_tag=LDO50_RS15645;product=lysophospholipid acyltransferase family protein;protein_id=WP_034194492.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 4619 5458 . - . ID=gene-LDO50_RS15650;Name=LDO50_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15650;old_locus_tag=BVI1335_240007 NZ_CAJZAO010000157.1 Protein Homology CDS 4619 5458 . - 0 ID=cds-WP_176317597.1;Parent=gene-LDO50_RS15650;Dbxref=GenBank:WP_176317597.1;Name=WP_176317597.1;Ontology_term=GO:0008803;gbkey=CDS;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765015.1;locus_tag=LDO50_RS15650;product=symmetrical bis(5'-nucleosyl)-tetraphosphatase;protein_id=WP_176317597.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 5801 6862 . + . ID=gene-LDO50_RS15655;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=LDO50_RS15655;old_locus_tag=BVI1335_240009 NZ_CAJZAO010000157.1 Protein Homology CDS 5801 6862 . + 0 ID=cds-WP_059476142.1;Parent=gene-LDO50_RS15655;Dbxref=GenBank:WP_059476142.1;Name=WP_059476142.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406347.1;locus_tag=LDO50_RS15655;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_059476142.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 6874 7767 . + . ID=gene-LDO50_RS15660;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=LDO50_RS15660;old_locus_tag=BVI1335_240010 NZ_CAJZAO010000157.1 Protein Homology CDS 6874 7767 . + 0 ID=cds-WP_060092898.1;Parent=gene-LDO50_RS15660;Dbxref=GenBank:WP_060092898.1;Name=WP_060092898.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328029.1;locus_tag=LDO50_RS15660;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_060092898.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 7752 8303 . + . ID=gene-LDO50_RS15665;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=LDO50_RS15665;old_locus_tag=BVI1335_240011 NZ_CAJZAO010000157.1 Protein Homology CDS 7752 8303 . + 0 ID=cds-WP_060092900.1;Parent=gene-LDO50_RS15665;Dbxref=GenBank:WP_060092900.1;Name=WP_060092900.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406345.1;locus_tag=LDO50_RS15665;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_060092900.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 8300 9232 . + . ID=gene-LDO50_RS15670;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=LDO50_RS15670;old_locus_tag=BVI1335_240012 NZ_CAJZAO010000157.1 Protein Homology CDS 8300 9232 . + 0 ID=cds-WP_060092902.1;Parent=gene-LDO50_RS15670;Dbxref=GenBank:WP_060092902.1;Name=WP_060092902.1;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011852083.1;locus_tag=LDO50_RS15670;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_060092902.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 9321 10142 . + . ID=gene-LDO50_RS15675;Name=LDO50_RS15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15675;old_locus_tag=BVI1335_240013 NZ_CAJZAO010000157.1 Protein Homology CDS 9321 10142 . + 0 ID=cds-WP_060092905.1;Parent=gene-LDO50_RS15675;Dbxref=GenBank:WP_060092905.1;Name=WP_060092905.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734814.1;locus_tag=LDO50_RS15675;product=ABC transporter permease;protein_id=WP_060092905.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 10132 11472 . + . ID=gene-LDO50_RS15680;Name=LDO50_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15680;old_locus_tag=BVI1335_240014 NZ_CAJZAO010000157.1 Protein Homology CDS 10132 11472 . + 0 ID=cds-WP_224019871.1;Parent=gene-LDO50_RS15680;Dbxref=GenBank:WP_224019871.1;Name=WP_224019871.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007589022.1;locus_tag=LDO50_RS15680;product=ABC transporter ATP-binding protein;protein_id=WP_224019871.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 11506 14508 . + . ID=gene-LDO50_RS15685;Name=LDO50_RS15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15685;old_locus_tag=BVI1335_240015 NZ_CAJZAO010000157.1 Protein Homology CDS 11506 14508 . + 0 ID=cds-WP_175935944.1;Parent=gene-LDO50_RS15685;Dbxref=GenBank:WP_175935944.1;Name=WP_175935944.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021616.6;locus_tag=LDO50_RS15685;product=glycosyltransferase;protein_id=WP_175935944.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 14508 15458 . + . ID=gene-LDO50_RS15690;Name=LDO50_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15690;old_locus_tag=BVI1335_240016 NZ_CAJZAO010000157.1 Protein Homology CDS 14508 15458 . + 0 ID=cds-WP_060092911.1;Parent=gene-LDO50_RS15690;Dbxref=GenBank:WP_060092911.1;Name=WP_060092911.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008160790.1;locus_tag=LDO50_RS15690;product=glycosyltransferase family 2 protein;protein_id=WP_060092911.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 15504 16787 . + . ID=gene-LDO50_RS15695;Name=LDO50_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15695;old_locus_tag=BVI1335_240017 NZ_CAJZAO010000157.1 Protein Homology CDS 15504 16787 . + 0 ID=cds-WP_175935943.1;Parent=gene-LDO50_RS15695;Dbxref=GenBank:WP_175935943.1;Name=WP_175935943.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: protein motif:HMM:NF025072.6;locus_tag=LDO50_RS15695;product=glycosyltransferase family 4 protein;protein_id=WP_175935943.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 16784 17734 . + . ID=gene-LDO50_RS15700;Name=LDO50_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15700;old_locus_tag=BVI1335_240018 NZ_CAJZAO010000157.1 Protein Homology CDS 16784 17734 . + 0 ID=cds-WP_060092915.1;Parent=gene-LDO50_RS15700;Dbxref=GenBank:WP_060092915.1;Name=WP_060092915.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400950.1;locus_tag=LDO50_RS15700;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_060092915.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 17755 18693 . + . ID=gene-LDO50_RS15705;Name=LDO50_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15705;old_locus_tag=BVI1335_240019 NZ_CAJZAO010000157.1 Protein Homology CDS 17755 18693 . + 0 ID=cds-WP_060092917.1;Parent=gene-LDO50_RS15705;Dbxref=GenBank:WP_060092917.1;Name=WP_060092917.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: protein motif:HMM:TIGR01556.1;locus_tag=LDO50_RS15705;product=glycosyltransferase family 2 protein;protein_id=WP_060092917.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 18766 19626 . + . ID=gene-LDO50_RS15710;Name=LDO50_RS15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15710;old_locus_tag=BVI1335_240020 NZ_CAJZAO010000157.1 Protein Homology CDS 18766 19626 . + 0 ID=cds-WP_224019872.1;Parent=gene-LDO50_RS15710;Dbxref=GenBank:WP_224019872.1;Name=WP_224019872.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467506.1;locus_tag=LDO50_RS15710;product=glycosyltransferase family 2 protein;protein_id=WP_224019872.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 19623 20588 . + . ID=gene-LDO50_RS15715;Name=LDO50_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15715;old_locus_tag=BVI1335_240021 NZ_CAJZAO010000157.1 Protein Homology CDS 19623 20588 . + 0 ID=cds-WP_060092923.1;Parent=gene-LDO50_RS15715;Dbxref=GenBank:WP_060092923.1;Name=WP_060092923.1;Ontology_term=GO:0016854;gbkey=CDS;go_function=racemase and epimerase activity|0016854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544758.1;locus_tag=LDO50_RS15715;product=UDP-glucose 4-epimerase family protein;protein_id=WP_060092923.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 20594 21610 . + . ID=gene-LDO50_RS15720;Name=LDO50_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15720;old_locus_tag=BVI1335_240022 NZ_CAJZAO010000157.1 Protein Homology CDS 20594 21610 . + 0 ID=cds-WP_060092919.1;Parent=gene-LDO50_RS15720;Dbxref=GenBank:WP_060092919.1;Name=WP_060092919.1;Ontology_term=GO:0009252,GO:0016780,GO:0046872;gbkey=CDS;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751083.1;locus_tag=LDO50_RS15720;product=MraY family glycosyltransferase;protein_id=WP_060092919.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 21623 23509 . + . ID=gene-LDO50_RS15725;Name=LDO50_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15725;old_locus_tag=BVI1335_240023 NZ_CAJZAO010000157.1 Protein Homology CDS 21623 23509 . + 0 ID=cds-WP_060092921.1;Parent=gene-LDO50_RS15725;Dbxref=GenBank:WP_060092921.1;Name=WP_060092921.1;Ontology_term=GO:0000271;gbkey=CDS;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897875.1;locus_tag=LDO50_RS15725;product=polysaccharide biosynthesis protein;protein_id=WP_060092921.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 23617 25434 . - . ID=gene-LDO50_RS15730;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LDO50_RS15730;old_locus_tag=BVI1335_240024 NZ_CAJZAO010000157.1 Protein Homology CDS 23617 25434 . - 0 ID=cds-WP_176153333.1;Parent=gene-LDO50_RS15730;Dbxref=GenBank:WP_176153333.1;Name=WP_176153333.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011000145.1;locus_tag=LDO50_RS15730;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_176153333.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 25530 26636 . - . ID=gene-LDO50_RS15735;Name=LDO50_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15735;old_locus_tag=BVI1335_240025 NZ_CAJZAO010000157.1 Protein Homology CDS 25530 26636 . - 0 ID=cds-WP_060093240.1;Parent=gene-LDO50_RS15735;Dbxref=GenBank:WP_060093240.1;Name=WP_060093240.1;Ontology_term=GO:0009252,GO:0016780,GO:0046872;gbkey=CDS;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363239.1;locus_tag=LDO50_RS15735;product=MraY family glycosyltransferase;protein_id=WP_060093240.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 26664 27686 . - . ID=gene-LDO50_RS15740;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=LDO50_RS15740;old_locus_tag=BVI1335_240026 NZ_CAJZAO010000157.1 Protein Homology CDS 26664 27686 . - 0 ID=cds-WP_224019873.1;Parent=gene-LDO50_RS15740;Dbxref=GenBank:WP_224019873.1;Name=WP_224019873.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527590.1;locus_tag=LDO50_RS15740;product=UDP-glucose 4-epimerase GalE;protein_id=WP_224019873.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 27702 28838 . - . ID=gene-LDO50_RS15745;Name=LDO50_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15745;old_locus_tag=BVI1335_240027 NZ_CAJZAO010000157.1 Protein Homology CDS 27702 28838 . - 0 ID=cds-WP_224019874.1;Parent=gene-LDO50_RS15745;Dbxref=GenBank:WP_224019874.1;Name=WP_224019874.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414629.1;locus_tag=LDO50_RS15745;product=glycosyltransferase family 4 protein;protein_id=WP_224019874.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 28880 29704 . - . ID=gene-LDO50_RS15750;Name=LDO50_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15750;old_locus_tag=BVI1335_240028 NZ_CAJZAO010000157.1 Protein Homology CDS 28880 29704 . - 0 ID=cds-WP_011883555.1;Parent=gene-LDO50_RS15750;Dbxref=GenBank:WP_011883555.1;Name=WP_011883555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889604.1;locus_tag=LDO50_RS15750;product=glycosyltransferase;protein_id=WP_011883555.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq gene 29701 30957 . - . ID=gene-LDO50_RS15755;Name=LDO50_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15755;old_locus_tag=BVI1335_240029 NZ_CAJZAO010000157.1 Protein Homology CDS 29701 30957 . - 0 ID=cds-WP_034194510.1;Parent=gene-LDO50_RS15755;Dbxref=GenBank:WP_034194510.1;Name=WP_034194510.1;Ontology_term=GO:0140327,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=flippase activity|0140327||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751076.1;locus_tag=LDO50_RS15755;product=lipopolysaccharide biosynthesis protein;protein_id=WP_034194510.1;transl_table=11 NZ_CAJZAO010000157.1 RefSeq pseudogene 31175 31418 . + . ID=gene-LDO50_RS31585;Name=LDO50_RS31585;end_range=31418,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31585;old_locus_tag=BVI1335_240030;partial=true;pseudo=true NZ_CAJZAO010000157.1 Protein Homology CDS 31175 31418 . + 0 ID=cds-LDO50_RS31585;Parent=gene-LDO50_RS31585;Note=catalyzes the interconversion of alpha-D-mannose 1-phosphate to alpha-D-mannose 6-phosphate and alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=31418,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880554.1;locus_tag=LDO50_RS31585;partial=true;product=phosphomannomutase/phosphoglucomutase;pseudo=true;transl_table=11 NZ_CAJZAO010000157.1 RefSeq pseudogene 31429 31578 . + . ID=gene-LDO50_RS31590;Name=LDO50_RS31590;end_range=31578,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31590;partial=true;pseudo=true;start_range=.,31429 NZ_CAJZAO010000157.1 Protein Homology CDS 31429 31578 . + 1 ID=cds-LDO50_RS31590;Parent=gene-LDO50_RS31590;Note=catalyzes the interconversion of alpha-D-mannose 1-phosphate to alpha-D-mannose 6-phosphate and alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=31578,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004544191.1;locus_tag=LDO50_RS31590;partial=true;product=phosphomannomutase/phosphoglucomutase;pseudo=true;start_range=.,31429;transl_table=11 ##sequence-region NZ_CAJZAO010000158.1 1 5274 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000158.1 RefSeq region 1 5274 . + . ID=NZ_CAJZAO010000158.1:1..5274;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_240 NZ_CAJZAO010000158.1 RefSeq gene 1 922 . + . ID=gene-LDO50_RS15765;Name=LDO50_RS15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15765;old_locus_tag=BVI1335_2400001;partial=true;start_range=.,1 NZ_CAJZAO010000158.1 Protein Homology CDS 1 922 . + 1 ID=cds-WP_224019877.1;Parent=gene-LDO50_RS15765;Dbxref=GenBank:WP_224019877.1;Name=WP_224019877.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762618.1;locus_tag=LDO50_RS15765;partial=true;product=class I SAM-dependent methyltransferase;protein_id=WP_224019877.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000158.1 RefSeq gene 935 1129 . + . ID=gene-LDO50_RS15770;Name=LDO50_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15770;old_locus_tag=BVI1335_2400002 NZ_CAJZAO010000158.1 Protein Homology CDS 935 1129 . + 0 ID=cds-WP_011886217.1;Parent=gene-LDO50_RS15770;Dbxref=GenBank:WP_011886217.1;Name=WP_011886217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895841.1;locus_tag=LDO50_RS15770;product=DUF2905 domain-containing protein;protein_id=WP_011886217.1;transl_table=11 NZ_CAJZAO010000158.1 RefSeq gene 1258 1479 . - . ID=gene-LDO50_RS15775;Name=LDO50_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15775;old_locus_tag=BVI1335_2400003 NZ_CAJZAO010000158.1 Protein Homology CDS 1258 1479 . - 0 ID=cds-WP_011886216.1;Parent=gene-LDO50_RS15775;Dbxref=GenBank:WP_011886216.1;Name=WP_011886216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886216.1;locus_tag=LDO50_RS15775;product=hypothetical protein;protein_id=WP_011886216.1;transl_table=11 NZ_CAJZAO010000158.1 RefSeq gene 1608 2516 . - . ID=gene-LDO50_RS15780;Name=LDO50_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15780;old_locus_tag=BVI1335_2400004 NZ_CAJZAO010000158.1 Protein Homology CDS 1608 2516 . - 0 ID=cds-WP_011886215.1;Parent=gene-LDO50_RS15780;Dbxref=GenBank:WP_011886215.1;Name=WP_011886215.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409152.1;locus_tag=LDO50_RS15780;product=carbohydrate kinase family protein;protein_id=WP_011886215.1;transl_table=11 NZ_CAJZAO010000158.1 RefSeq gene 2513 3793 . - . ID=gene-LDO50_RS15785;Name=LDO50_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15785;old_locus_tag=BVI1335_2400005 NZ_CAJZAO010000158.1 Protein Homology CDS 2513 3793 . - 0 ID=cds-WP_224019878.1;Parent=gene-LDO50_RS15785;Dbxref=GenBank:WP_224019878.1;Name=WP_224019878.1;Ontology_term=GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754116.1;locus_tag=LDO50_RS15785;product=AGE family epimerase/isomerase;protein_id=WP_224019878.1;transl_table=11 NZ_CAJZAO010000158.1 RefSeq gene 3790 4809 . - . ID=gene-LDO50_RS15790;Name=LDO50_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15790;old_locus_tag=BVI1335_2400006 NZ_CAJZAO010000158.1 Protein Homology CDS 3790 4809 . - 0 ID=cds-WP_014723774.1;Parent=gene-LDO50_RS15790;Dbxref=GenBank:WP_014723774.1;Name=WP_014723774.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398052.1;locus_tag=LDO50_RS15790;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_014723774.1;transl_table=11 ##sequence-region NZ_CAJZAO010000159.1 1 2542 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000159.1 RefSeq region 1 2542 . + . ID=NZ_CAJZAO010000159.1:1..2542;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_241 NZ_CAJZAO010000159.1 RefSeq pseudogene 1 229 . + . ID=gene-LDO50_RS15795;Name=LDO50_RS15795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS15795;old_locus_tag=BVI1335_2410001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000159.1 Protein Homology CDS 1 229 . + 1 ID=cds-LDO50_RS15795;Parent=gene-LDO50_RS15795;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546341.1;locus_tag=LDO50_RS15795;partial=true;product=copper homeostasis protein CutC;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000159.1 RefSeq gene 480 1499 . - . ID=gene-LDO50_RS15800;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=LDO50_RS15800;old_locus_tag=BVI1335_2410002 NZ_CAJZAO010000159.1 Protein Homology CDS 480 1499 . - 0 ID=cds-WP_011886182.1;Parent=gene-LDO50_RS15800;Dbxref=GenBank:WP_011886182.1;Name=WP_011886182.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886182.1;locus_tag=LDO50_RS15800;product=biotin synthase BioB;protein_id=WP_011886182.1;transl_table=11 NZ_CAJZAO010000159.1 RefSeq gene 1544 2263 . - . ID=gene-LDO50_RS15805;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=LDO50_RS15805;old_locus_tag=BVI1335_2410003 NZ_CAJZAO010000159.1 Protein Homology CDS 1544 2263 . - 0 ID=cds-WP_011886181.1;Parent=gene-LDO50_RS15805;Dbxref=GenBank:WP_011886181.1;Name=WP_011886181.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886181.1;locus_tag=LDO50_RS15805;product=dethiobiotin synthase;protein_id=WP_011886181.1;transl_table=11 NZ_CAJZAO010000159.1 RefSeq gene 2260 2542 . - . ID=gene-LDO50_RS15810;Name=LDO50_RS15810;end_range=2542,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15810;old_locus_tag=BVI1335_2410004;partial=true NZ_CAJZAO010000159.1 Protein Homology CDS 2260 2542 . - 1 ID=cds-WP_224019879.1;Parent=gene-LDO50_RS15810;Dbxref=GenBank:WP_224019879.1;Name=WP_224019879.1;Ontology_term=GO:0009058,GO:0030170;end_range=2542,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329324.1;locus_tag=LDO50_RS15810;partial=true;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_224019879.1;transl_table=11 ##sequence-region NZ_CAJZAO010000160.1 1 10917 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000160.1 RefSeq region 1 10917 . + . ID=NZ_CAJZAO010000160.1:1..10917;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_242 NZ_CAJZAO010000160.1 RefSeq gene 1 1174 . - . ID=gene-LDO50_RS15815;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=LDO50_RS15815;partial=true;start_range=.,1 NZ_CAJZAO010000160.1 Protein Homology CDS 1 1174 . - 0 ID=cds-WP_224019880.1;Parent=gene-LDO50_RS15815;Dbxref=GenBank:WP_224019880.1;Name=WP_224019880.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213246.1;locus_tag=LDO50_RS15815;partial=true;product=DNA polymerase III subunit gamma/tau;protein_id=WP_224019880.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000160.1 RefSeq gene 1302 1400 . - . ID=gene-LDO50_RS15820;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=LDO50_RS15820;old_locus_tag=BVI1335_MISCRNA48 NZ_CAJZAO010000160.1 cmsearch SRP_RNA 1302 1400 . - . ID=rna-LDO50_RS15820;Parent=gene-LDO50_RS15820;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO50_RS15820;product=signal recognition particle sRNA small type NZ_CAJZAO010000160.1 cmsearch exon 1302 1400 . - . ID=exon-LDO50_RS15820-1;Parent=rna-LDO50_RS15820;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO50_RS15820;product=signal recognition particle sRNA small type NZ_CAJZAO010000160.1 RefSeq gene 1791 2117 . + . ID=gene-LDO50_RS15825;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=LDO50_RS15825;old_locus_tag=BVI1335_2420004 NZ_CAJZAO010000160.1 Protein Homology CDS 1791 2117 . + 0 ID=cds-WP_006402348.1;Parent=gene-LDO50_RS15825;Dbxref=GenBank:WP_006402348.1;Name=WP_006402348.1;Ontology_term=GO:0045454,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026981.1;locus_tag=LDO50_RS15825;product=thioredoxin TrxA;protein_id=WP_006402348.1;transl_table=11 NZ_CAJZAO010000160.1 RefSeq gene 2312 3574 . + . ID=gene-LDO50_RS15830;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=LDO50_RS15830;old_locus_tag=BVI1335_2420005 NZ_CAJZAO010000160.1 Protein Homology CDS 2312 3574 . + 0 ID=cds-WP_006478662.1;Parent=gene-LDO50_RS15830;Dbxref=GenBank:WP_006478662.1;Name=WP_006478662.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013435079.1;locus_tag=LDO50_RS15830;product=transcription termination factor Rho;protein_id=WP_006478662.1;transl_table=11 NZ_CAJZAO010000160.1 RefSeq gene 3705 4205 . + . ID=gene-LDO50_RS15835;Name=LDO50_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15835;old_locus_tag=BVI1335_2420006 NZ_CAJZAO010000160.1 Protein Homology CDS 3705 4205 . + 0 ID=cds-WP_014723110.1;Parent=gene-LDO50_RS15835;Dbxref=GenBank:WP_014723110.1;Name=WP_014723110.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328636.1;locus_tag=LDO50_RS15835;product=MerR family transcriptional regulator;protein_id=WP_014723110.1;transl_table=11 NZ_CAJZAO010000160.1 RefSeq gene 4202 5758 . + . ID=gene-LDO50_RS15840;Name=LDO50_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15840;old_locus_tag=BVI1335_2420007 NZ_CAJZAO010000160.1 Protein Homology CDS 4202 5758 . + 0 ID=cds-WP_034195403.1;Parent=gene-LDO50_RS15840;Dbxref=GenBank:WP_034195403.1;Name=WP_034195403.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255169.1;locus_tag=LDO50_RS15840;product=MFS transporter;protein_id=WP_034195403.1;transl_table=11 NZ_CAJZAO010000160.1 RefSeq gene 5797 6627 . + . ID=gene-LDO50_RS15845;Name=LDO50_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15845;old_locus_tag=BVI1335_2420008 NZ_CAJZAO010000160.1 Protein Homology CDS 5797 6627 . + 0 ID=cds-WP_011884984.1;Parent=gene-LDO50_RS15845;Dbxref=GenBank:WP_011884984.1;Name=WP_011884984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364008.1;locus_tag=LDO50_RS15845;product=zinc-dependent peptidase;protein_id=WP_011884984.1;transl_table=11 NZ_CAJZAO010000160.1 RefSeq gene 6788 7051 . + . ID=gene-LDO50_RS15850;Name=LDO50_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15850;old_locus_tag=BVI1335_2420009 NZ_CAJZAO010000160.1 Protein Homology CDS 6788 7051 . + 0 ID=cds-WP_011884985.1;Parent=gene-LDO50_RS15850;Dbxref=GenBank:WP_011884985.1;Name=WP_011884985.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010103191.1;locus_tag=LDO50_RS15850;product=type B 50S ribosomal protein L31;protein_id=WP_011884985.1;transl_table=11 NZ_CAJZAO010000160.1 RefSeq gene 7281 9038 . + . ID=gene-LDO50_RS15855;Name=LDO50_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15855;old_locus_tag=BVI1335_2420010 NZ_CAJZAO010000160.1 Protein Homology CDS 7281 9038 . + 0 ID=cds-WP_059460798.1;Parent=gene-LDO50_RS15855;Dbxref=GenBank:WP_059460798.1;Name=WP_059460798.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753670.1;locus_tag=LDO50_RS15855;product=ArnT family glycosyltransferase;protein_id=WP_059460798.1;transl_table=11 NZ_CAJZAO010000160.1 RefSeq gene 9041 10390 . + . ID=gene-LDO50_RS15860;Name=LDO50_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15860;old_locus_tag=BVI1335_2420011 NZ_CAJZAO010000160.1 Protein Homology CDS 9041 10390 . + 0 ID=cds-WP_011884987.1;Parent=gene-LDO50_RS15860;Dbxref=GenBank:WP_011884987.1;Name=WP_011884987.1;Ontology_term=GO:0006855,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884987.1;locus_tag=LDO50_RS15860;product=MATE family efflux transporter;protein_id=WP_011884987.1;transl_table=11 NZ_CAJZAO010000160.1 RefSeq gene 10406 10917 . - . ID=gene-LDO50_RS15865;Name=LDO50_RS15865;end_range=10917,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15865;old_locus_tag=BVI1335_2420012;partial=true NZ_CAJZAO010000160.1 Protein Homology CDS 10406 10917 . - 2 ID=cds-WP_224019881.1;Parent=gene-LDO50_RS15865;Dbxref=GenBank:WP_224019881.1;Name=WP_224019881.1;end_range=10917,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657038.1;locus_tag=LDO50_RS15865;partial=true;product=lipoyl synthase;protein_id=WP_224019881.1;transl_table=11 ##sequence-region NZ_CAJZAO010000161.1 1 655 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000161.1 RefSeq region 1 655 . + . ID=NZ_CAJZAO010000161.1:1..655;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_243 ##sequence-region NZ_CAJZAO010000162.1 1 15484 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000162.1 RefSeq region 1 15484 . + . ID=NZ_CAJZAO010000162.1:1..15484;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_244 NZ_CAJZAO010000162.1 RefSeq pseudogene 1 331 . - . ID=gene-LDO50_RS15870;Name=LDO50_RS15870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS15870;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000162.1 Protein Homology CDS 1 331 . - 0 ID=cds-LDO50_RS15870;Parent=gene-LDO50_RS15870;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548185.1;locus_tag=LDO50_RS15870;partial=true;product=AraC family transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000162.1 RefSeq gene 354 695 . - . ID=gene-LDO50_RS15875;Name=LDO50_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15875;old_locus_tag=BVI1335_2440002 NZ_CAJZAO010000162.1 Protein Homology CDS 354 695 . - 0 ID=cds-WP_011881547.1;Parent=gene-LDO50_RS15875;Dbxref=GenBank:WP_011881547.1;Name=WP_011881547.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754049.1;locus_tag=LDO50_RS15875;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_011881547.1;transl_table=11 NZ_CAJZAO010000162.1 RefSeq gene 1258 2181 . + . ID=gene-LDO50_RS15880;Name=LDO50_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15880;old_locus_tag=BVI1335_2440003 NZ_CAJZAO010000162.1 Protein Homology CDS 1258 2181 . + 0 ID=cds-WP_059695989.1;Parent=gene-LDO50_RS15880;Dbxref=GenBank:WP_059695989.1;Name=WP_059695989.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479473.1;locus_tag=LDO50_RS15880;product=metal-dependent hydrolase;protein_id=WP_059695989.1;transl_table=11 NZ_CAJZAO010000162.1 RefSeq gene 2648 4114 . + . ID=gene-LDO50_RS15885;Name=LDO50_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15885;old_locus_tag=BVI1335_2440005 NZ_CAJZAO010000162.1 Protein Homology CDS 2648 4114 . + 0 ID=cds-WP_011881549.1;Parent=gene-LDO50_RS15885;Dbxref=GenBank:WP_011881549.1;Name=WP_011881549.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754051.1;locus_tag=LDO50_RS15885;product=sigma-54 dependent transcriptional regulator;protein_id=WP_011881549.1;transl_table=11 NZ_CAJZAO010000162.1 RefSeq gene 4657 4905 . + . ID=gene-LDO50_RS15890;Name=LDO50_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15890;old_locus_tag=BVI1335_2440004 NZ_CAJZAO010000162.1 Protein Homology CDS 4657 4905 . + 0 ID=cds-WP_014724625.1;Parent=gene-LDO50_RS15890;Dbxref=GenBank:WP_014724625.1;Name=WP_014724625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881550.1;locus_tag=LDO50_RS15890;product=hypothetical protein;protein_id=WP_014724625.1;transl_table=11 NZ_CAJZAO010000162.1 RefSeq gene 5123 5905 . - . ID=gene-LDO50_RS15895;Name=LDO50_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15895;old_locus_tag=BVI1335_2440006 NZ_CAJZAO010000162.1 Protein Homology CDS 5123 5905 . - 0 ID=cds-WP_034194975.1;Parent=gene-LDO50_RS15895;Dbxref=GenBank:WP_034194975.1;Name=WP_034194975.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090202.1;locus_tag=LDO50_RS15895;product=ABC transporter substrate-binding protein;protein_id=WP_034194975.1;transl_table=11 NZ_CAJZAO010000162.1 RefSeq gene 6143 6571 . + . ID=gene-LDO50_RS15900;Name=LDO50_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15900;old_locus_tag=BVI1335_2440008 NZ_CAJZAO010000162.1 Protein Homology CDS 6143 6571 . + 0 ID=cds-WP_034194976.1;Parent=gene-LDO50_RS15900;Dbxref=GenBank:WP_034194976.1;Name=WP_034194976.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009895626.1;locus_tag=LDO50_RS15900;product=MbcA/ParS/Xre antitoxin family protein;protein_id=WP_034194976.1;transl_table=11 NZ_CAJZAO010000162.1 RefSeq gene 6574 7269 . + . ID=gene-LDO50_RS15905;Name=LDO50_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15905;old_locus_tag=BVI1335_2440009 NZ_CAJZAO010000162.1 Protein Homology CDS 6574 7269 . + 0 ID=cds-WP_060082122.1;Parent=gene-LDO50_RS15905;Dbxref=GenBank:WP_060082122.1;Name=WP_060082122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660474.1;locus_tag=LDO50_RS15905;product=RES family NAD+ phosphorylase;protein_id=WP_060082122.1;transl_table=11 NZ_CAJZAO010000162.1 RefSeq gene 7304 8029 . - . ID=gene-LDO50_RS15910;Name=LDO50_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15910;old_locus_tag=BVI1335_2440010 NZ_CAJZAO010000162.1 Protein Homology CDS 7304 8029 . - 0 ID=cds-WP_059463451.1;Parent=gene-LDO50_RS15910;Dbxref=GenBank:WP_059463451.1;Name=WP_059463451.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900053.1;locus_tag=LDO50_RS15910;product=metallophosphoesterase;protein_id=WP_059463451.1;transl_table=11 NZ_CAJZAO010000162.1 RefSeq gene 8166 8819 . + . ID=gene-LDO50_RS15915;Name=LDO50_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15915;old_locus_tag=BVI1335_2440011 NZ_CAJZAO010000162.1 Protein Homology CDS 8166 8819 . + 0 ID=cds-WP_014724630.1;Parent=gene-LDO50_RS15915;Dbxref=GenBank:WP_014724630.1;Name=WP_014724630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009895632.1;locus_tag=LDO50_RS15915;product=DUF1345 domain-containing protein;protein_id=WP_014724630.1;transl_table=11 NZ_CAJZAO010000162.1 RefSeq gene 8829 9539 . - . ID=gene-LDO50_RS15920;Name=LDO50_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15920;old_locus_tag=BVI1335_2440012 NZ_CAJZAO010000162.1 Protein Homology CDS 8829 9539 . - 0 ID=cds-WP_014724631.1;Parent=gene-LDO50_RS15920;Dbxref=GenBank:WP_014724631.1;Name=WP_014724631.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660478.1;locus_tag=LDO50_RS15920;product=class I SAM-dependent methyltransferase;protein_id=WP_014724631.1;transl_table=11 NZ_CAJZAO010000162.1 RefSeq gene 9842 11494 . + . ID=gene-LDO50_RS15925;Name=LDO50_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15925;old_locus_tag=BVI1335_2440013 NZ_CAJZAO010000162.1 Protein Homology CDS 9842 11494 . + 0 ID=cds-WP_041494271.1;Parent=gene-LDO50_RS15925;Dbxref=GenBank:WP_041494271.1;Name=WP_041494271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881557.1;locus_tag=LDO50_RS15925;product=DUF3459 domain-containing protein;protein_id=WP_041494271.1;transl_table=11 NZ_CAJZAO010000162.1 RefSeq gene 11509 12093 . - . ID=gene-LDO50_RS15930;Name=LDO50_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15930;old_locus_tag=BVI1335_2440014 NZ_CAJZAO010000162.1 Protein Homology CDS 11509 12093 . - 0 ID=cds-WP_045578184.1;Parent=gene-LDO50_RS15930;Dbxref=GenBank:WP_045578184.1;Name=WP_045578184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404154.1;locus_tag=LDO50_RS15930;product=thiamine phosphate synthase;protein_id=WP_045578184.1;transl_table=11 NZ_CAJZAO010000162.1 RefSeq gene 12116 13459 . - . ID=gene-LDO50_RS15935;Name=LDO50_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15935;old_locus_tag=BVI1335_2440015 NZ_CAJZAO010000162.1 Protein Homology CDS 12116 13459 . - 0 ID=cds-WP_014724634.1;Parent=gene-LDO50_RS15935;Dbxref=GenBank:WP_014724634.1;Name=WP_014724634.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004546848.1;locus_tag=LDO50_RS15935;product=hemolysin family protein;protein_id=WP_014724634.1;transl_table=11 NZ_CAJZAO010000162.1 RefSeq gene 13536 14315 . - . ID=gene-LDO50_RS15940;Name=LDO50_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15940;old_locus_tag=BVI1335_2440016 NZ_CAJZAO010000162.1 Protein Homology CDS 13536 14315 . - 0 ID=cds-WP_034195057.1;Parent=gene-LDO50_RS15940;Dbxref=GenBank:WP_034195057.1;Name=WP_034195057.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497274.1;locus_tag=LDO50_RS15940;product=sensor histidine kinase;protein_id=WP_034195057.1;transl_table=11 NZ_CAJZAO010000162.1 RefSeq gene 14383 15306 . - . ID=gene-LDO50_RS15945;Name=LDO50_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15945;old_locus_tag=BVI1335_2440017 NZ_CAJZAO010000162.1 Protein Homology CDS 14383 15306 . - 0 ID=cds-WP_011881561.1;Parent=gene-LDO50_RS15945;Dbxref=GenBank:WP_011881561.1;Name=WP_011881561.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410288.1;locus_tag=LDO50_RS15945;product=DMT family transporter;protein_id=WP_011881561.1;transl_table=11 NZ_CAJZAO010000162.1 RefSeq pseudogene 15348 15484 . - . ID=gene-LDO50_RS15950;Name=LDO50_RS15950;end_range=15484,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS15950;partial=true;pseudo=true NZ_CAJZAO010000162.1 Protein Homology CDS 15348 15484 . - 2 ID=cds-LDO50_RS15950;Parent=gene-LDO50_RS15950;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=15484,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493188.1;locus_tag=LDO50_RS15950;partial=true;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000163.1 1 704 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000163.1 RefSeq region 1 704 . + . ID=NZ_CAJZAO010000163.1:1..704;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_245 NZ_CAJZAO010000163.1 RefSeq gene 1 181 . + . ID=gene-LDO50_RS15955;Name=LDO50_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15955;old_locus_tag=BVI1335_2450001;partial=true;start_range=.,1 NZ_CAJZAO010000163.1 Protein Homology CDS 1 181 . + 1 ID=cds-WP_224019882.1;Parent=gene-LDO50_RS15955;Dbxref=GenBank:WP_224019882.1;Name=WP_224019882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192097.1;locus_tag=LDO50_RS15955;partial=true;product=Dabb family protein;protein_id=WP_224019882.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000163.1 RefSeq pseudogene 178 365 . + . ID=gene-LDO50_RS31595;Name=LDO50_RS31595;end_range=365,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31595;old_locus_tag=BVI1335_2450002;partial=true;pseudo=true NZ_CAJZAO010000163.1 Protein Homology CDS 178 365 . + 0 ID=cds-LDO50_RS31595;Parent=gene-LDO50_RS31595;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0016790,GO:0016836,GO:0047617;end_range=365,.;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193935.1;locus_tag=LDO50_RS31595;partial=true;product=PaaI family thioesterase;pseudo=true;transl_table=11 NZ_CAJZAO010000163.1 RefSeq gene 376 637 . + . ID=gene-LDO50_RS31600;Name=LDO50_RS31600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31600;old_locus_tag=BVI1335_2450003;partial=true;start_range=.,376 NZ_CAJZAO010000163.1 Protein Homology CDS 376 637 . + 1 ID=cds-WP_443797784.1;Parent=gene-LDO50_RS31600;Dbxref=GenBank:WP_443797784.1;Name=WP_443797784.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193935.1;locus_tag=LDO50_RS31600;partial=true;product=PaaI family thioesterase;protein_id=WP_443797784.1;start_range=.,376;transl_table=11 ##sequence-region NZ_CAJZAO010000164.1 1 10896 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000164.1 RefSeq region 1 10896 . + . ID=NZ_CAJZAO010000164.1:1..10896;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_246 NZ_CAJZAO010000164.1 RefSeq pseudogene 1 275 . - . ID=gene-LDO50_RS15965;Name=LDO50_RS15965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS15965;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000164.1 Protein Homology CDS 1 275 . - 0 ID=cds-LDO50_RS15965;Parent=gene-LDO50_RS15965;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477899.1;locus_tag=LDO50_RS15965;partial=true;product=copper resistance protein CopD;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000164.1 RefSeq gene 467 1231 . + . ID=gene-LDO50_RS15970;Name=LDO50_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15970;old_locus_tag=BVI1335_2460003 NZ_CAJZAO010000164.1 Protein Homology CDS 467 1231 . + 0 ID=cds-WP_034192684.1;Parent=gene-LDO50_RS15970;Dbxref=GenBank:WP_034192684.1;Name=WP_034192684.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546139.1;locus_tag=LDO50_RS15970;product=c-type cytochrome;protein_id=WP_034192684.1;transl_table=11 NZ_CAJZAO010000164.1 RefSeq gene 1251 2549 . + . ID=gene-LDO50_RS15975;Name=LDO50_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15975;old_locus_tag=BVI1335_2460004 NZ_CAJZAO010000164.1 Protein Homology CDS 1251 2549 . + 0 ID=cds-WP_014723593.1;Parent=gene-LDO50_RS15975;Dbxref=GenBank:WP_014723593.1;Name=WP_014723593.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334110.1;locus_tag=LDO50_RS15975;product=c-type cytochrome;protein_id=WP_014723593.1;transl_table=11 NZ_CAJZAO010000164.1 RefSeq gene 2679 4139 . + . ID=gene-LDO50_RS15980;Name=LDO50_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15980;old_locus_tag=BVI1335_2460005 NZ_CAJZAO010000164.1 Protein Homology CDS 2679 4139 . + 0 ID=cds-WP_011885945.1;Parent=gene-LDO50_RS15980;Dbxref=GenBank:WP_011885945.1;Name=WP_011885945.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398366.1;locus_tag=LDO50_RS15980;product=DEAD/DEAH box helicase;protein_id=WP_011885945.1;transl_table=11 NZ_CAJZAO010000164.1 RefSeq gene 4133 4642 . - . ID=gene-LDO50_RS15985;Name=LDO50_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15985;old_locus_tag=BVI1335_2460006 NZ_CAJZAO010000164.1 Protein Homology CDS 4133 4642 . - 0 ID=cds-WP_043291532.1;Parent=gene-LDO50_RS15985;Dbxref=GenBank:WP_043291532.1;Name=WP_043291532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484466.1;locus_tag=LDO50_RS15985;product=hypothetical protein;protein_id=WP_043291532.1;transl_table=11 NZ_CAJZAO010000164.1 RefSeq gene 4710 5537 . - . ID=gene-LDO50_RS15990;Name=LDO50_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15990;old_locus_tag=BVI1335_2460007 NZ_CAJZAO010000164.1 Protein Homology CDS 4710 5537 . - 0 ID=cds-WP_011885947.1;Parent=gene-LDO50_RS15990;Dbxref=GenBank:WP_011885947.1;Name=WP_011885947.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896130.1;locus_tag=LDO50_RS15990;product=ferritin-like domain-containing protein;protein_id=WP_011885947.1;transl_table=11 NZ_CAJZAO010000164.1 RefSeq gene 5872 7512 . - . ID=gene-LDO50_RS15995;Name=LDO50_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS15995;old_locus_tag=BVI1335_2460008 NZ_CAJZAO010000164.1 Protein Homology CDS 5872 7512 . - 0 ID=cds-WP_224019883.1;Parent=gene-LDO50_RS15995;Dbxref=GenBank:WP_224019883.1;Name=WP_224019883.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212762.1;locus_tag=LDO50_RS15995;product=gamma-glutamyltransferase family protein;protein_id=WP_224019883.1;transl_table=11 NZ_CAJZAO010000164.1 RefSeq gene 7814 8593 . + . ID=gene-LDO50_RS16000;Name=LDO50_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16000;old_locus_tag=BVI1335_2460009 NZ_CAJZAO010000164.1 Protein Homology CDS 7814 8593 . + 0 ID=cds-WP_011885949.1;Parent=gene-LDO50_RS16000;Dbxref=GenBank:WP_011885949.1;Name=WP_011885949.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364650.1;locus_tag=LDO50_RS16000;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_011885949.1;transl_table=11 NZ_CAJZAO010000164.1 RefSeq gene 8894 9091 . + . ID=gene-LDO50_RS16005;Name=LDO50_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16005;old_locus_tag=BVI1335_2460010 NZ_CAJZAO010000164.1 Protein Homology CDS 8894 9091 . + 0 ID=cds-WP_011885950.1;Parent=gene-LDO50_RS16005;Dbxref=GenBank:WP_011885950.1;Name=WP_011885950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189182.1;locus_tag=LDO50_RS16005;product=hypothetical protein;protein_id=WP_011885950.1;transl_table=11 NZ_CAJZAO010000164.1 RefSeq gene 9190 9558 . - . ID=gene-LDO50_RS16010;Name=LDO50_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16010;old_locus_tag=BVI1335_2460012 NZ_CAJZAO010000164.1 Protein Homology CDS 9190 9558 . - 0 ID=cds-WP_011885951.1;Parent=gene-LDO50_RS16010;Dbxref=GenBank:WP_011885951.1;Name=WP_011885951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896126.1;locus_tag=LDO50_RS16010;product=hypothetical protein;protein_id=WP_011885951.1;transl_table=11 NZ_CAJZAO010000164.1 RefSeq gene 9720 10896 . + . ID=gene-LDO50_RS16015;Name=glpD;end_range=10896,.;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=LDO50_RS16015;partial=true NZ_CAJZAO010000164.1 Protein Homology CDS 9720 10896 . + 0 ID=cds-WP_224019884.1;Parent=gene-LDO50_RS16015;Dbxref=GenBank:WP_224019884.1;Name=WP_224019884.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;end_range=10896,.;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534185.1;locus_tag=LDO50_RS16015;partial=true;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_224019884.1;transl_table=11 ##sequence-region NZ_CAJZAO010000165.1 1 2884 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000165.1 RefSeq region 1 2884 . + . ID=NZ_CAJZAO010000165.1:1..2884;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_247 NZ_CAJZAO010000165.1 RefSeq gene 1 2072 . + . ID=gene-LDO50_RS16020;Name=LDO50_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16020;old_locus_tag=BVI1335_2470001;partial=true;start_range=.,1 NZ_CAJZAO010000165.1 Protein Homology CDS 1 2072 . + 2 ID=cds-WP_224019885.1;Parent=gene-LDO50_RS16020;Dbxref=GenBank:WP_224019885.1;Name=WP_224019885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881422.1;locus_tag=LDO50_RS16020;partial=true;product=DUF802 domain-containing protein;protein_id=WP_224019885.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000165.1 RefSeq gene 2076 2720 . + . ID=gene-LDO50_RS16025;Name=LDO50_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16025;old_locus_tag=BVI1335_2470002 NZ_CAJZAO010000165.1 Protein Homology CDS 2076 2720 . + 0 ID=cds-WP_014724507.1;Parent=gene-LDO50_RS16025;Dbxref=GenBank:WP_014724507.1;Name=WP_014724507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217569.1;locus_tag=LDO50_RS16025;product=OmpA family protein;protein_id=WP_014724507.1;transl_table=11 NZ_CAJZAO010000165.1 RefSeq gene 2717 2884 . + . ID=gene-LDO50_RS16030;Name=LDO50_RS16030;end_range=2884,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16030;partial=true NZ_CAJZAO010000165.1 Protein Homology CDS 2717 2884 . + 0 ID=cds-WP_224019886.1;Parent=gene-LDO50_RS16030;Dbxref=GenBank:WP_224019886.1;Name=WP_224019886.1;end_range=2884,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397895.1;locus_tag=LDO50_RS16030;partial=true;product=DUF2894 domain-containing protein;protein_id=WP_224019886.1;transl_table=11 ##sequence-region NZ_CAJZAO010000166.1 1 6810 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000166.1 RefSeq region 1 6810 . + . ID=NZ_CAJZAO010000166.1:1..6810;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_248 NZ_CAJZAO010000166.1 RefSeq pseudogene 1 378 . - . ID=gene-LDO50_RS16035;Name=LDO50_RS16035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS16035;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000166.1 Protein Homology CDS 1 378 . - 0 ID=cds-LDO50_RS16035;Parent=gene-LDO50_RS16035;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333520.1;locus_tag=LDO50_RS16035;partial=true;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000166.1 RefSeq pseudogene 392 625 . - . ID=gene-LDO50_RS30980;Name=LDO50_RS30980;end_range=625,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS30980;partial=true;pseudo=true NZ_CAJZAO010000166.1 Protein Homology CDS 392 625 . - 0 ID=cds-LDO50_RS30980;Parent=gene-LDO50_RS30980;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0034194,GO:0008671;end_range=625,.;gbkey=CDS;go_function=2-dehydro-3-deoxygalactonokinase activity|0008671||IEA;go_process=D-galactonate catabolic process|0034194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883232.1;locus_tag=LDO50_RS30980;partial=true;product=2-dehydro-3-deoxygalactonokinase;pseudo=true;transl_table=11 NZ_CAJZAO010000166.1 RefSeq pseudogene 605 1162 . - . ID=gene-LDO50_RS16040;Name=LDO50_RS16040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS16040;old_locus_tag=BVI1335_2480002;partial=true;pseudo=true;start_range=.,605 NZ_CAJZAO010000166.1 Protein Homology CDS 605 1162 . - 0 ID=cds-LDO50_RS16040;Parent=gene-LDO50_RS16040;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329129.1;locus_tag=LDO50_RS16040;partial=true;product=PfkB family carbohydrate kinase;pseudo=true;start_range=.,605;transl_table=11 NZ_CAJZAO010000166.1 RefSeq gene 1235 2011 . - . ID=gene-LDO50_RS16045;Name=LDO50_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16045;old_locus_tag=BVI1335_2480003 NZ_CAJZAO010000166.1 Protein Homology CDS 1235 2011 . - 0 ID=cds-WP_011885879.1;Parent=gene-LDO50_RS16045;Dbxref=GenBank:WP_011885879.1;Name=WP_011885879.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876870.1;locus_tag=LDO50_RS16045;product=L-iditol 2-dehydrogenase;protein_id=WP_011885879.1;transl_table=11 NZ_CAJZAO010000166.1 RefSeq gene 2339 2800 . + . ID=gene-LDO50_RS16050;Name=LDO50_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16050;old_locus_tag=BVI1335_2480005 NZ_CAJZAO010000166.1 Protein Homology CDS 2339 2800 . + 0 ID=cds-WP_011885880.1;Parent=gene-LDO50_RS16050;Dbxref=GenBank:WP_011885880.1;Name=WP_011885880.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896195.1;locus_tag=LDO50_RS16050;product=Fur family transcriptional regulator;protein_id=WP_011885880.1;transl_table=11 NZ_CAJZAO010000166.1 RefSeq gene 2849 3763 . + . ID=gene-LDO50_RS16055;Name=LDO50_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16055;old_locus_tag=BVI1335_2480006 NZ_CAJZAO010000166.1 Protein Homology CDS 2849 3763 . + 0 ID=cds-WP_011885881.1;Parent=gene-LDO50_RS16055;Dbxref=GenBank:WP_011885881.1;Name=WP_011885881.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754783.1;locus_tag=LDO50_RS16055;product=metal ABC transporter solute-binding protein%2C Zn/Mn family;protein_id=WP_011885881.1;transl_table=11 NZ_CAJZAO010000166.1 RefSeq gene 3777 4664 . + . ID=gene-LDO50_RS16060;Name=LDO50_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16060;old_locus_tag=BVI1335_2480007 NZ_CAJZAO010000166.1 Protein Homology CDS 3777 4664 . + 0 ID=cds-WP_014723550.1;Parent=gene-LDO50_RS16060;Dbxref=GenBank:WP_014723550.1;Name=WP_014723550.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410050.1;locus_tag=LDO50_RS16060;product=ABC transporter ATP-binding protein;protein_id=WP_014723550.1;transl_table=11 NZ_CAJZAO010000166.1 RefSeq gene 4657 5439 . + . ID=gene-LDO50_RS16065;Name=LDO50_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16065;old_locus_tag=BVI1335_2480008 NZ_CAJZAO010000166.1 Protein Homology CDS 4657 5439 . + 0 ID=cds-WP_014723551.1;Parent=gene-LDO50_RS16065;Dbxref=GenBank:WP_014723551.1;Name=WP_014723551.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329133.1;locus_tag=LDO50_RS16065;product=metal ABC transporter permease;protein_id=WP_014723551.1;transl_table=11 NZ_CAJZAO010000166.1 RefSeq pseudogene 5557 6032 . - . ID=gene-LDO50_RS31605;Name=LDO50_RS31605;end_range=6032,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31605;old_locus_tag=BVI1335_2480010;partial=true;pseudo=true NZ_CAJZAO010000166.1 Protein Homology CDS 5557 6032 . - 1 ID=cds-LDO50_RS31605;Parent=gene-LDO50_RS31605;Note=frameshifted%3B incomplete%3B missing N-terminus;end_range=6032,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012958.6;locus_tag=LDO50_RS31605;partial=true;product=alpha/beta hydrolase-fold protein;pseudo=true;transl_table=11 NZ_CAJZAO010000166.1 RefSeq gene 6043 6322 . - . ID=gene-LDO50_RS31610;Name=LDO50_RS31610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31610;old_locus_tag=BVI1335_2480011;partial=true;start_range=.,6043 NZ_CAJZAO010000166.1 Protein Homology CDS 6043 6322 . - 0 ID=cds-WP_443797785.1;Parent=gene-LDO50_RS31610;Dbxref=GenBank:WP_443797785.1;Name=WP_443797785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212803.1;locus_tag=LDO50_RS31610;partial=true;product=alpha/beta hydrolase-fold protein;protein_id=WP_443797785.1;start_range=.,6043;transl_table=11 NZ_CAJZAO010000166.1 RefSeq pseudogene 6643 6810 . - . ID=gene-LDO50_RS16075;Name=LDO50_RS16075;end_range=6810,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS16075;partial=true;pseudo=true NZ_CAJZAO010000166.1 Protein Homology CDS 6643 6810 . - 0 ID=cds-LDO50_RS16075;Parent=gene-LDO50_RS16075;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=6810,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546089.1;locus_tag=LDO50_RS16075;partial=true;product=carbohydrate kinase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000167.1 1 4714 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000167.1 RefSeq region 1 4714 . + . ID=NZ_CAJZAO010000167.1:1..4714;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_249 NZ_CAJZAO010000167.1 RefSeq gene 1 1007 . + . ID=gene-LDO50_RS16080;Name=LDO50_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16080;old_locus_tag=BVI1335_2490001;partial=true;start_range=.,1 NZ_CAJZAO010000167.1 Protein Homology CDS 1 1007 . + 2 ID=cds-WP_224019888.1;Parent=gene-LDO50_RS16080;Dbxref=GenBank:WP_224019888.1;Name=WP_224019888.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0016866;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,intramolecular transferase activity|0016866||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723221.1;locus_tag=LDO50_RS16080;partial=true;product=pseudouridine synthase;protein_id=WP_224019888.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000167.1 RefSeq gene 1110 1643 . - . ID=gene-LDO50_RS16085;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=LDO50_RS16085;old_locus_tag=BVI1335_2490002 NZ_CAJZAO010000167.1 Protein Homology CDS 1110 1643 . - 0 ID=cds-WP_011885149.1;Parent=gene-LDO50_RS16085;Dbxref=GenBank:WP_011885149.1;Name=WP_011885149.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890431.1;locus_tag=LDO50_RS16085;product=peptide deformylase;protein_id=WP_011885149.1;transl_table=11 NZ_CAJZAO010000167.1 RefSeq gene 1640 3715 . - . ID=gene-LDO50_RS16090;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=LDO50_RS16090;old_locus_tag=BVI1335_2490003 NZ_CAJZAO010000167.1 Protein Homology CDS 1640 3715 . - 0 ID=cds-WP_014723222.1;Parent=gene-LDO50_RS16090;Dbxref=GenBank:WP_014723222.1;Name=WP_014723222.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213133.1;locus_tag=LDO50_RS16090;product=NAD-dependent DNA ligase LigA;protein_id=WP_014723222.1;transl_table=11 NZ_CAJZAO010000167.1 RefSeq gene 3876 4566 . - . ID=gene-LDO50_RS16095;Name=LDO50_RS16095;end_range=4566,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16095;old_locus_tag=BVI1335_2490004;partial=true NZ_CAJZAO010000167.1 Protein Homology CDS 3876 4566 . - 1 ID=cds-WP_443797786.1;Parent=gene-LDO50_RS16095;Dbxref=GenBank:WP_443797786.1;Name=WP_443797786.1;Ontology_term=GO:0090529;end_range=4566,.;gbkey=CDS;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755126.1;locus_tag=LDO50_RS16095;partial=true;product=cell division protein ZipA C-terminal FtsZ-binding domain-containing protein;protein_id=WP_443797786.1;transl_table=11 NZ_CAJZAO010000167.1 RefSeq pseudogene 4577 4714 . - . ID=gene-LDO50_RS31615;Name=LDO50_RS31615;end_range=4714,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31615;partial=true;pseudo=true;start_range=.,4577 NZ_CAJZAO010000167.1 Protein Homology CDS 4577 4714 . - 1 ID=cds-LDO50_RS31615;Parent=gene-LDO50_RS31615;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=4714,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011488872.1;locus_tag=LDO50_RS31615;partial=true;product=cell division protein ZipA C-terminal FtsZ-binding domain-containing protein;pseudo=true;start_range=.,4577;transl_table=11 ##sequence-region NZ_CAJZAO010000168.1 1 11982 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000168.1 RefSeq region 1 11982 . + . ID=NZ_CAJZAO010000168.1:1..11982;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_25 NZ_CAJZAO010000168.1 RefSeq gene 1 1993 . + . ID=gene-LDO50_RS16100;Name=LDO50_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16100;old_locus_tag=BVI1335_250001;partial=true;start_range=.,1 NZ_CAJZAO010000168.1 Protein Homology CDS 1 1993 . + 1 ID=cds-WP_224019889.1;Parent=gene-LDO50_RS16100;Dbxref=GenBank:WP_224019889.1;Name=WP_224019889.1;Ontology_term=GO:0009313,GO:0030979,GO:0004553,GO:0016758;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,hexosyltransferase activity|0016758||IEA;go_process=oligosaccharide catabolic process|0009313||IEA,alpha-glucan biosynthetic process|0030979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217900.1;locus_tag=LDO50_RS16100;partial=true;product=alpha-1%2C4-glucan--maltose-1-phosphate maltosyltransferase;protein_id=WP_224019889.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000168.1 RefSeq gene 1993 5403 . + . ID=gene-LDO50_RS16105;Name=treS;gbkey=Gene;gene=treS;gene_biotype=protein_coding;locus_tag=LDO50_RS16105;old_locus_tag=BVI1335_250002 NZ_CAJZAO010000168.1 Protein Homology CDS 1993 5403 . + 0 ID=cds-WP_059459624.1;Parent=gene-LDO50_RS16105;Dbxref=GenBank:WP_059459624.1;Name=WP_059459624.1;Ontology_term=GO:0005991,GO:0047471;gbkey=CDS;gene=treS;go_function=maltose alpha-D-glucosyltransferase activity|0047471||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879950.1;locus_tag=LDO50_RS16105;product=maltose alpha-D-glucosyltransferase;protein_id=WP_059459624.1;transl_table=11 NZ_CAJZAO010000168.1 RefSeq gene 5400 7601 . + . ID=gene-LDO50_RS16110;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=LDO50_RS16110;old_locus_tag=BVI1335_250004 NZ_CAJZAO010000168.1 Protein Homology CDS 5400 7601 . + 0 ID=cds-WP_224019890.1;Parent=gene-LDO50_RS16110;Dbxref=GenBank:WP_224019890.1;Name=WP_224019890.1;Ontology_term=GO:0005975,GO:0005978,GO:0003844,GO:0004553,GO:0043169;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521799.1;locus_tag=LDO50_RS16110;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=WP_224019890.1;transl_table=11 NZ_CAJZAO010000168.1 RefSeq gene 7634 9760 . + . ID=gene-LDO50_RS16115;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=LDO50_RS16115;old_locus_tag=BVI1335_250003 NZ_CAJZAO010000168.1 Protein Homology CDS 7634 9760 . + 0 ID=cds-WP_059459626.1;Parent=gene-LDO50_RS16115;Dbxref=GenBank:WP_059459626.1;Name=WP_059459626.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725717.1;locus_tag=LDO50_RS16115;product=glycogen debranching protein GlgX;protein_id=WP_059459626.1;transl_table=11 NZ_CAJZAO010000168.1 RefSeq gene 9757 11811 . + . ID=gene-LDO50_RS16120;Name=treZ;end_range=11811,.;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=LDO50_RS16120;partial=true NZ_CAJZAO010000168.1 Protein Homology CDS 9757 11811 . + 0 ID=cds-WP_224019891.1;Parent=gene-LDO50_RS16120;Dbxref=GenBank:WP_224019891.1;Name=WP_224019891.1;Ontology_term=GO:0005992,GO:0033942;end_range=11811,.;gbkey=CDS;gene=treZ;go_function=4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity|0033942||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879947.1;locus_tag=LDO50_RS16120;partial=true;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_224019891.1;transl_table=11 ##sequence-region NZ_CAJZAO010000169.1 1 3903 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000169.1 RefSeq region 1 3903 . + . ID=NZ_CAJZAO010000169.1:1..3903;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_250 NZ_CAJZAO010000169.1 RefSeq gene 144 3903 . + . ID=gene-LDO50_RS16125;Name=LDO50_RS16125;end_range=3903,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16125;partial=true NZ_CAJZAO010000169.1 Protein Homology CDS 144 3903 . + 0 ID=cds-WP_224019892.1;Parent=gene-LDO50_RS16125;Dbxref=GenBank:WP_224019892.1;Name=WP_224019892.1;end_range=3903,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547305.1;locus_tag=LDO50_RS16125;partial=true;product=DUF4781 domain-containing protein;protein_id=WP_224019892.1;transl_table=11 ##sequence-region NZ_CAJZAO010000170.1 1 2101 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000170.1 RefSeq region 1 2101 . + . ID=NZ_CAJZAO010000170.1:1..2101;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_251 NZ_CAJZAO010000170.1 RefSeq gene 141 1177 . + . ID=gene-LDO50_RS16130;Name=LDO50_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16130;old_locus_tag=BVI1335_2510001;partial=true;start_range=.,141 NZ_CAJZAO010000170.1 Protein Homology CDS 141 1177 . + 2 ID=cds-WP_224019893.1;Parent=gene-LDO50_RS16130;Dbxref=GenBank:WP_224019893.1;Name=WP_224019893.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657092.1;locus_tag=LDO50_RS16130;partial=true;product=tyrosine-type recombinase/integrase;protein_id=WP_224019893.1;start_range=.,141;transl_table=11 NZ_CAJZAO010000170.1 RefSeq gene 1484 1803 . + . ID=gene-LDO50_RS31620;Name=LDO50_RS31620;end_range=1803,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31620;old_locus_tag=BVI1335_2510003;partial=true NZ_CAJZAO010000170.1 GeneMarkS-2+ CDS 1484 1803 . + 0 ID=cds-WP_443797787.1;Parent=gene-LDO50_RS31620;Dbxref=GenBank:WP_443797787.1;Name=WP_443797787.1;end_range=1803,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS31620;partial=true;product=hypothetical protein;protein_id=WP_443797787.1;transl_table=11 ##sequence-region NZ_CAJZAO010000171.1 1 8637 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000171.1 RefSeq region 1 8637 . + . ID=NZ_CAJZAO010000171.1:1..8637;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_252 NZ_CAJZAO010000171.1 RefSeq gene 1 1004 . - . ID=gene-LDO50_RS16135;Name=LDO50_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16135;partial=true;start_range=.,1 NZ_CAJZAO010000171.1 Protein Homology CDS 1 1004 . - 0 ID=cds-WP_224019894.1;Parent=gene-LDO50_RS16135;Dbxref=GenBank:WP_224019894.1;Name=WP_224019894.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724979.1;locus_tag=LDO50_RS16135;partial=true;product=ABC transporter ATP-binding protein;protein_id=WP_224019894.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000171.1 RefSeq gene 997 2769 . - . ID=gene-LDO50_RS16140;Name=LDO50_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16140;old_locus_tag=BVI1335_2520002 NZ_CAJZAO010000171.1 Protein Homology CDS 997 2769 . - 0 ID=cds-WP_011882098.1;Parent=gene-LDO50_RS16140;Dbxref=GenBank:WP_011882098.1;Name=WP_011882098.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899532.1;locus_tag=LDO50_RS16140;product=ABC transporter permease;protein_id=WP_011882098.1;transl_table=11 NZ_CAJZAO010000171.1 RefSeq gene 2887 3975 . - . ID=gene-LDO50_RS16145;Name=LDO50_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16145;old_locus_tag=BVI1335_2520003 NZ_CAJZAO010000171.1 Protein Homology CDS 2887 3975 . - 0 ID=cds-WP_011882099.1;Parent=gene-LDO50_RS16145;Dbxref=GenBank:WP_011882099.1;Name=WP_011882099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355369.1;locus_tag=LDO50_RS16145;product=ABC transporter substrate-binding protein;protein_id=WP_011882099.1;transl_table=11 NZ_CAJZAO010000171.1 RefSeq gene 4207 4881 . + . ID=gene-LDO50_RS16150;Name=LDO50_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16150;old_locus_tag=BVI1335_2520004 NZ_CAJZAO010000171.1 Protein Homology CDS 4207 4881 . + 0 ID=cds-WP_011882100.1;Parent=gene-LDO50_RS16150;Dbxref=GenBank:WP_011882100.1;Name=WP_011882100.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467903.1;locus_tag=LDO50_RS16150;product=response regulator;protein_id=WP_011882100.1;transl_table=11 NZ_CAJZAO010000171.1 RefSeq gene 4913 6316 . + . ID=gene-LDO50_RS16155;Name=LDO50_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16155;old_locus_tag=BVI1335_2520005 NZ_CAJZAO010000171.1 Protein Homology CDS 4913 6316 . + 0 ID=cds-WP_059461081.1;Parent=gene-LDO50_RS16155;Dbxref=GenBank:WP_059461081.1;Name=WP_059461081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882101.1;locus_tag=LDO50_RS16155;product=sensor histidine kinase;protein_id=WP_059461081.1;transl_table=11 NZ_CAJZAO010000171.1 RefSeq gene 6461 7327 . - . ID=gene-LDO50_RS16160;Name=LDO50_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16160;old_locus_tag=BVI1335_2520006 NZ_CAJZAO010000171.1 Protein Homology CDS 6461 7327 . - 0 ID=cds-WP_059461080.1;Parent=gene-LDO50_RS16160;Dbxref=GenBank:WP_059461080.1;Name=WP_059461080.1;Ontology_term=GO:0016661,GO:0030151,GO:0030170,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338272.1;locus_tag=LDO50_RS16160;product=MOSC domain-containing protein;protein_id=WP_059461080.1;transl_table=11 NZ_CAJZAO010000171.1 RefSeq gene 7450 8406 . - . ID=gene-LDO50_RS16165;Name=LDO50_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16165;old_locus_tag=BVI1335_2520007 NZ_CAJZAO010000171.1 Protein Homology CDS 7450 8406 . - 0 ID=cds-WP_011882103.1;Parent=gene-LDO50_RS16165;Dbxref=GenBank:WP_011882103.1;Name=WP_011882103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217070.1;locus_tag=LDO50_RS16165;product=ABC transporter substrate-binding protein;protein_id=WP_011882103.1;transl_table=11 NZ_CAJZAO010000171.1 RefSeq pseudogene 8449 8637 . - . ID=gene-LDO50_RS16170;Name=LDO50_RS16170;end_range=8637,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS16170;old_locus_tag=BVI1335_2520008;partial=true;pseudo=true NZ_CAJZAO010000171.1 Protein Homology CDS 8449 8637 . - 0 ID=cds-LDO50_RS16170;Parent=gene-LDO50_RS16170;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=8637,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338270.1;locus_tag=LDO50_RS16170;partial=true;product=cytochrome c;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000172.1 1 13668 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000172.1 RefSeq region 1 13668 . + . ID=NZ_CAJZAO010000172.1:1..13668;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_253 NZ_CAJZAO010000172.1 RefSeq gene 1 648 . - . ID=gene-LDO50_RS16175;Name=LDO50_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16175;partial=true;start_range=.,1 NZ_CAJZAO010000172.1 Protein Homology CDS 1 648 . - 0 ID=cds-WP_224019895.1;Parent=gene-LDO50_RS16175;Dbxref=GenBank:WP_224019895.1;Name=WP_224019895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884427.1;locus_tag=LDO50_RS16175;partial=true;product=YbfB/YjiJ family MFS transporter;protein_id=WP_224019895.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000172.1 RefSeq gene 753 1667 . + . ID=gene-LDO50_RS16180;Name=LDO50_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16180;old_locus_tag=BVI1335_2530002 NZ_CAJZAO010000172.1 Protein Homology CDS 753 1667 . + 0 ID=cds-WP_011884425.1;Parent=gene-LDO50_RS16180;Dbxref=GenBank:WP_011884425.1;Name=WP_011884425.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722862.1;locus_tag=LDO50_RS16180;product=LysR family transcriptional regulator;protein_id=WP_011884425.1;transl_table=11 NZ_CAJZAO010000172.1 RefSeq gene 2026 4650 . - . ID=gene-LDO50_RS16185;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=LDO50_RS16185;old_locus_tag=BVI1335_2530003 NZ_CAJZAO010000172.1 Protein Homology CDS 2026 4650 . - 0 ID=cds-WP_045579232.1;Parent=gene-LDO50_RS16185;Dbxref=GenBank:WP_045579232.1;Name=WP_045579232.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401005.1;locus_tag=LDO50_RS16185;product=alanine--tRNA ligase;protein_id=WP_045579232.1;transl_table=11 NZ_CAJZAO010000172.1 RefSeq gene 4888 6108 . + . ID=gene-LDO50_RS16190;Name=LDO50_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16190;old_locus_tag=BVI1335_2530004 NZ_CAJZAO010000172.1 Protein Homology CDS 4888 6108 . + 0 ID=cds-WP_011884420.1;Parent=gene-LDO50_RS16190;Dbxref=GenBank:WP_011884420.1;Name=WP_011884420.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754069.1;locus_tag=LDO50_RS16190;product=CaiB/BaiF CoA transferase family protein;protein_id=WP_011884420.1;transl_table=11 NZ_CAJZAO010000172.1 RefSeq gene 6344 6907 . - . ID=gene-LDO50_RS16195;Name=LDO50_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16195;old_locus_tag=BVI1335_2530005 NZ_CAJZAO010000172.1 Protein Homology CDS 6344 6907 . - 0 ID=cds-WP_011884419.1;Parent=gene-LDO50_RS16195;Dbxref=GenBank:WP_011884419.1;Name=WP_011884419.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722858.1;locus_tag=LDO50_RS16195;product=RBBP9/YdeN family alpha/beta hydrolase;protein_id=WP_011884419.1;transl_table=11 NZ_CAJZAO010000172.1 RefSeq gene 7076 7285 . - . ID=gene-LDO50_RS16200;Name=LDO50_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16200;old_locus_tag=BVI1335_2530006 NZ_CAJZAO010000172.1 Protein Homology CDS 7076 7285 . - 0 ID=cds-WP_011884418.1;Parent=gene-LDO50_RS16200;Dbxref=GenBank:WP_011884418.1;Name=WP_011884418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884418.1;locus_tag=LDO50_RS16200;product=ornithine acetyltransferase;protein_id=WP_011884418.1;transl_table=11 NZ_CAJZAO010000172.1 RefSeq gene 7538 9247 . + . ID=gene-LDO50_RS16205;Name=LDO50_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16205;old_locus_tag=BVI1335_2530007 NZ_CAJZAO010000172.1 Protein Homology CDS 7538 9247 . + 0 ID=cds-WP_011884416.1;Parent=gene-LDO50_RS16205;Dbxref=GenBank:WP_011884416.1;Name=WP_011884416.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764572.1;locus_tag=LDO50_RS16205;product=glutamine--tRNA ligase/YqeY domain fusion protein;protein_id=WP_011884416.1;transl_table=11 NZ_CAJZAO010000172.1 RefSeq gene 9383 9853 . - . ID=gene-LDO50_RS16210;Name=LDO50_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16210;old_locus_tag=BVI1335_2530008 NZ_CAJZAO010000172.1 Protein Homology CDS 9383 9853 . - 0 ID=cds-WP_046429103.1;Parent=gene-LDO50_RS16210;Dbxref=GenBank:WP_046429103.1;Name=WP_046429103.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656603.1;locus_tag=LDO50_RS16210;product=NUDIX hydrolase;protein_id=WP_046429103.1;transl_table=11 NZ_CAJZAO010000172.1 RefSeq gene 9865 10251 . - . ID=gene-LDO50_RS16215;Name=LDO50_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16215;old_locus_tag=BVI1335_2530009 NZ_CAJZAO010000172.1 Protein Homology CDS 9865 10251 . - 0 ID=cds-WP_224019896.1;Parent=gene-LDO50_RS16215;Dbxref=GenBank:WP_224019896.1;Name=WP_224019896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897301.1;locus_tag=LDO50_RS16215;product=RT0821/Lpp0805 family surface protein;protein_id=WP_224019896.1;transl_table=11 NZ_CAJZAO010000172.1 RefSeq gene 10408 11769 . - . ID=gene-LDO50_RS16220;Name=LDO50_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16220;old_locus_tag=BVI1335_2530010 NZ_CAJZAO010000172.1 Protein Homology CDS 10408 11769 . - 0 ID=cds-WP_011884409.1;Parent=gene-LDO50_RS16220;Dbxref=GenBank:WP_011884409.1;Name=WP_011884409.1;Ontology_term=GO:0004130,GO:0016491,GO:0020037;gbkey=CDS;go_function=cytochrome-c peroxidase activity|0004130||IEA,oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884409.1;locus_tag=LDO50_RS16220;product=cytochrome-c peroxidase;protein_id=WP_011884409.1;transl_table=11 NZ_CAJZAO010000172.1 RefSeq gene 11988 13402 . + . ID=gene-LDO50_RS16225;Name=acpA;end_range=13402,.;gbkey=Gene;gene=acpA;gene_biotype=protein_coding;locus_tag=LDO50_RS16225;old_locus_tag=BVI1335_2530011;partial=true NZ_CAJZAO010000172.1 Protein Homology CDS 11988 13402 . + 0 ID=cds-WP_224019897.1;Parent=gene-LDO50_RS16225;Dbxref=GenBank:WP_224019897.1;Name=WP_224019897.1;Ontology_term=GO:0003993;end_range=13402,.;gbkey=CDS;gene=acpA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602321.1;locus_tag=LDO50_RS16225;partial=true;product=acid phosphatase;protein_id=WP_224019897.1;transl_table=11 ##sequence-region NZ_CAJZAO010000173.1 1 1034 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000173.1 RefSeq region 1 1034 . + . ID=NZ_CAJZAO010000173.1:1..1034;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_254 NZ_CAJZAO010000173.1 RefSeq gene 143 899 . + . ID=gene-LDO50_RS31625;Name=LDO50_RS31625;end_range=899,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31625;partial=true NZ_CAJZAO010000173.1 GeneMarkS-2+ CDS 143 899 . + 0 ID=cds-WP_443797788.1;Parent=gene-LDO50_RS31625;Dbxref=GenBank:WP_443797788.1;Name=WP_443797788.1;end_range=899,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS31625;partial=true;product=hypothetical protein;protein_id=WP_443797788.1;transl_table=11 NZ_CAJZAO010000173.1 RefSeq pseudogene 910 1034 . - . ID=gene-LDO50_RS16230;Name=LDO50_RS16230;end_range=1034,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS16230;old_locus_tag=BVI1335_2540001;partial=true;pseudo=true;start_range=.,910 NZ_CAJZAO010000173.1 Protein Homology CDS 910 1034 . - 0 ID=cds-LDO50_RS16230;Parent=gene-LDO50_RS16230;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1034,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010929006.1;locus_tag=LDO50_RS16230;partial=true;product=linear amide C-N hydrolase;pseudo=true;start_range=.,910;transl_table=11 ##sequence-region NZ_CAJZAO010000174.1 1 948 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000174.1 RefSeq region 1 948 . + . ID=NZ_CAJZAO010000174.1:1..948;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_255 NZ_CAJZAO010000174.1 RefSeq gene 1 421 . + . ID=gene-LDO50_RS16235;Name=LDO50_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16235;partial=true;start_range=.,1 NZ_CAJZAO010000174.1 Protein Homology CDS 1 421 . + 1 ID=cds-WP_224019898.1;Parent=gene-LDO50_RS16235;Dbxref=GenBank:WP_224019898.1;Name=WP_224019898.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761137.1;locus_tag=LDO50_RS16235;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_224019898.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000174.1 RefSeq gene 477 948 . + . ID=gene-LDO50_RS16240;Name=LDO50_RS16240;end_range=948,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16240;partial=true NZ_CAJZAO010000174.1 Protein Homology CDS 477 948 . + 0 ID=cds-WP_224019899.1;Parent=gene-LDO50_RS16240;Dbxref=GenBank:WP_224019899.1;Name=WP_224019899.1;Ontology_term=GO:0009236,GO:0008939;end_range=948,.;gbkey=CDS;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694361.1;locus_tag=LDO50_RS16240;partial=true;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_224019899.1;transl_table=11 ##sequence-region NZ_CAJZAO010000175.1 1 941 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000175.1 RefSeq region 1 941 . + . ID=NZ_CAJZAO010000175.1:1..941;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_256 NZ_CAJZAO010000175.1 RefSeq pseudogene 1 366 . + . ID=gene-LDO50_RS31630;Name=LDO50_RS31630;end_range=366,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31630;old_locus_tag=BVI1335_2560001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000175.1 Protein Homology CDS 1 366 . + 2 ID=cds-LDO50_RS31630;Parent=gene-LDO50_RS31630;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=366,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754854.1;locus_tag=LDO50_RS31630;partial=true;product=pilus assembly protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000175.1 RefSeq pseudogene 498 941 . + . ID=gene-LDO50_RS16250;Name=LDO50_RS16250;end_range=941,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS16250;partial=true;pseudo=true NZ_CAJZAO010000175.1 Protein Homology CDS 498 941 . + 0 ID=cds-LDO50_RS16250;Parent=gene-LDO50_RS16250;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=941,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362906.1;locus_tag=LDO50_RS16250;partial=true;product=type IV pilus secretin PilQ;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000176.1 1 20297 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000176.1 RefSeq region 1 20297 . + . ID=NZ_CAJZAO010000176.1:1..20297;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_257 NZ_CAJZAO010000176.1 RefSeq gene 1 232 . + . ID=gene-LDO50_RS16255;Name=LDO50_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16255;old_locus_tag=BVI1335_2570001;partial=true;start_range=.,1 NZ_CAJZAO010000176.1 Protein Homology CDS 1 232 . + 1 ID=cds-WP_224019901.1;Parent=gene-LDO50_RS16255;Dbxref=GenBank:WP_224019901.1;Name=WP_224019901.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218241.1;locus_tag=LDO50_RS16255;partial=true;product=TolC family protein;protein_id=WP_224019901.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000176.1 RefSeq gene 277 717 . - . ID=gene-LDO50_RS16260;Name=LDO50_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16260;old_locus_tag=BVI1335_2570002 NZ_CAJZAO010000176.1 Protein Homology CDS 277 717 . - 0 ID=cds-WP_011880382.1;Parent=gene-LDO50_RS16260;Dbxref=GenBank:WP_011880382.1;Name=WP_011880382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880382.1;locus_tag=LDO50_RS16260;product=hypothetical protein;protein_id=WP_011880382.1;transl_table=11 NZ_CAJZAO010000176.1 RefSeq gene 1003 2448 . + . ID=gene-LDO50_RS16265;Name=LDO50_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16265;old_locus_tag=BVI1335_2570003 NZ_CAJZAO010000176.1 Protein Homology CDS 1003 2448 . + 0 ID=cds-WP_011880383.1;Parent=gene-LDO50_RS16265;Dbxref=GenBank:WP_011880383.1;Name=WP_011880383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415440.1;locus_tag=LDO50_RS16265;product=MBL fold metallo-hydrolase RNA specificity domain-containing protein;protein_id=WP_011880383.1;transl_table=11 NZ_CAJZAO010000176.1 RefSeq gene 2603 2914 . - . ID=gene-LDO50_RS16270;Name=LDO50_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16270;old_locus_tag=BVI1335_2570004 NZ_CAJZAO010000176.1 Protein Homology CDS 2603 2914 . - 0 ID=cds-WP_011880384.1;Parent=gene-LDO50_RS16270;Dbxref=GenBank:WP_011880384.1;Name=WP_011880384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880384.1;locus_tag=LDO50_RS16270;product=cyclic-phosphate processing receiver domain-containing protein;protein_id=WP_011880384.1;transl_table=11 NZ_CAJZAO010000176.1 RefSeq gene 2898 4298 . - . ID=gene-LDO50_RS16275;Name=LDO50_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16275;old_locus_tag=BVI1335_2570005 NZ_CAJZAO010000176.1 Protein Homology CDS 2898 4298 . - 0 ID=cds-WP_059461657.1;Parent=gene-LDO50_RS16275;Dbxref=GenBank:WP_059461657.1;Name=WP_059461657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880385.1;locus_tag=LDO50_RS16275;product=PD-(D/E)XK nuclease family protein;protein_id=WP_059461657.1;transl_table=11 NZ_CAJZAO010000176.1 RefSeq gene 4565 5605 . - . ID=gene-LDO50_RS16280;Name=LDO50_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16280;old_locus_tag=BVI1335_2570007 NZ_CAJZAO010000176.1 Protein Homology CDS 4565 5605 . - 0 ID=cds-WP_224019902.1;Parent=gene-LDO50_RS16280;Dbxref=GenBank:WP_224019902.1;Name=WP_224019902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658829.1;locus_tag=LDO50_RS16280;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_224019902.1;transl_table=11 NZ_CAJZAO010000176.1 RefSeq gene 5625 7439 . - . ID=gene-LDO50_RS16285;Name=LDO50_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16285;old_locus_tag=BVI1335_2570008 NZ_CAJZAO010000176.1 Protein Homology CDS 5625 7439 . - 0 ID=cds-WP_011880387.1;Parent=gene-LDO50_RS16285;Dbxref=GenBank:WP_011880387.1;Name=WP_011880387.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366073.1;locus_tag=LDO50_RS16285;product=PHA/PHB synthase family protein;protein_id=WP_011880387.1;transl_table=11 NZ_CAJZAO010000176.1 RefSeq gene 7573 8319 . - . ID=gene-LDO50_RS16290;Name=phbB;gbkey=Gene;gene=phbB;gene_biotype=protein_coding;locus_tag=LDO50_RS16290;old_locus_tag=BVI1335_2570009 NZ_CAJZAO010000176.1 Protein Homology CDS 7573 8319 . - 0 ID=cds-WP_011880388.1;Parent=gene-LDO50_RS16290;Dbxref=GenBank:WP_011880388.1;Name=WP_011880388.1;Ontology_term=GO:0042619,GO:0018454,GO:0005737;gbkey=CDS;gene=phbB;go_component=cytoplasm|0005737||IEA;go_function=acetoacetyl-CoA reductase activity|0018454||IEA;go_process=poly-hydroxybutyrate biosynthetic process|0042619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726023.1;locus_tag=LDO50_RS16290;product=acetoacetyl-CoA reductase;protein_id=WP_011880388.1;transl_table=11 NZ_CAJZAO010000176.1 RefSeq gene 8309 8839 . - . ID=gene-LDO50_RS16295;Name=LDO50_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16295;old_locus_tag=BVI1335_2570010 NZ_CAJZAO010000176.1 Protein Homology CDS 8309 8839 . - 0 ID=cds-WP_011880389.1;Parent=gene-LDO50_RS16295;Dbxref=GenBank:WP_011880389.1;Name=WP_011880389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726024.1;locus_tag=LDO50_RS16295;product=hypothetical protein;protein_id=WP_011880389.1;transl_table=11 NZ_CAJZAO010000176.1 RefSeq gene 9028 9867 . + . ID=gene-LDO50_RS16300;Name=LDO50_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16300;old_locus_tag=BVI1335_2570012 NZ_CAJZAO010000176.1 Protein Homology CDS 9028 9867 . + 0 ID=cds-WP_011880390.1;Parent=gene-LDO50_RS16300;Dbxref=GenBank:WP_011880390.1;Name=WP_011880390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009968117.1;locus_tag=LDO50_RS16300;product=universal stress protein;protein_id=WP_011880390.1;transl_table=11 NZ_CAJZAO010000176.1 RefSeq gene 9876 11075 . + . ID=gene-LDO50_RS16305;Name=LDO50_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16305;old_locus_tag=BVI1335_2570011 NZ_CAJZAO010000176.1 Protein Homology CDS 9876 11075 . + 0 ID=cds-WP_011880391.1;Parent=gene-LDO50_RS16305;Dbxref=GenBank:WP_011880391.1;Name=WP_011880391.1;Ontology_term=GO:0006082,GO:0016310,GO:0000287,GO:0005524,GO:0016301,GO:0016774;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C carboxyl group as acceptor|0016774||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658823.1;locus_tag=LDO50_RS16305;product=acetate/propionate family kinase;protein_id=WP_011880391.1;transl_table=11 NZ_CAJZAO010000176.1 RefSeq gene 11145 11648 . + . ID=gene-LDO50_RS16310;Name=LDO50_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16310;old_locus_tag=BVI1335_2570013 NZ_CAJZAO010000176.1 Protein Homology CDS 11145 11648 . + 0 ID=cds-WP_011880392.1;Parent=gene-LDO50_RS16310;Dbxref=GenBank:WP_011880392.1;Name=WP_011880392.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218247.1;locus_tag=LDO50_RS16310;product=universal stress protein;protein_id=WP_011880392.1;transl_table=11 NZ_CAJZAO010000176.1 RefSeq gene 11645 12478 . + . ID=gene-LDO50_RS16315;Name=LDO50_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16315;old_locus_tag=BVI1335_2570014 NZ_CAJZAO010000176.1 Protein Homology CDS 11645 12478 . + 0 ID=cds-WP_011880393.1;Parent=gene-LDO50_RS16315;Dbxref=GenBank:WP_011880393.1;Name=WP_011880393.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880393.1;locus_tag=LDO50_RS16315;product=universal stress protein;protein_id=WP_011880393.1;transl_table=11 NZ_CAJZAO010000176.1 RefSeq gene 12539 13009 . - . ID=gene-LDO50_RS16320;Name=LDO50_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16320;old_locus_tag=BVI1335_2570015 NZ_CAJZAO010000176.1 Protein Homology CDS 12539 13009 . - 0 ID=cds-WP_011880394.1;Parent=gene-LDO50_RS16320;Dbxref=GenBank:WP_011880394.1;Name=WP_011880394.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726027.1;locus_tag=LDO50_RS16320;product=universal stress protein;protein_id=WP_011880394.1;transl_table=11 NZ_CAJZAO010000176.1 RefSeq gene 13622 14269 . + . ID=gene-LDO50_RS16325;Name=LDO50_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16325;old_locus_tag=BVI1335_2570016 NZ_CAJZAO010000176.1 Protein Homology CDS 13622 14269 . + 0 ID=cds-WP_011880395.1;Parent=gene-LDO50_RS16325;Dbxref=GenBank:WP_011880395.1;Name=WP_011880395.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009896856.1;locus_tag=LDO50_RS16325;product=response regulator;protein_id=WP_011880395.1;transl_table=11 NZ_CAJZAO010000176.1 RefSeq gene 14652 15425 . + . ID=gene-LDO50_RS16330;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=LDO50_RS16330;old_locus_tag=BVI1335_2570017 NZ_CAJZAO010000176.1 Protein Homology CDS 14652 15425 . + 0 ID=cds-WP_011880396.1;Parent=gene-LDO50_RS16330;Dbxref=GenBank:WP_011880396.1;Name=WP_011880396.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=fnr;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488370.1;locus_tag=LDO50_RS16330;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_011880396.1;transl_table=11 NZ_CAJZAO010000176.1 RefSeq gene 15551 16540 . - . ID=gene-LDO50_RS16335;Name=LDO50_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16335;old_locus_tag=BVI1335_2570018 NZ_CAJZAO010000176.1 Protein Homology CDS 15551 16540 . - 0 ID=cds-WP_011880397.1;Parent=gene-LDO50_RS16335;Dbxref=GenBank:WP_011880397.1;Name=WP_011880397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752861.1;locus_tag=LDO50_RS16335;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_011880397.1;transl_table=11 NZ_CAJZAO010000176.1 RefSeq gene 16717 17718 . + . ID=gene-LDO50_RS16340;Name=LDO50_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16340;old_locus_tag=BVI1335_2570019 NZ_CAJZAO010000176.1 Protein Homology CDS 16717 17718 . + 0 ID=cds-WP_059461658.1;Parent=gene-LDO50_RS16340;Dbxref=GenBank:WP_059461658.1;Name=WP_059461658.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726032.1;locus_tag=LDO50_RS16340;product=Acg family FMN-binding oxidoreductase;protein_id=WP_059461658.1;transl_table=11 NZ_CAJZAO010000176.1 RefSeq gene 17738 18073 . + . ID=gene-LDO50_RS16345;Name=LDO50_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16345;old_locus_tag=BVI1335_2570020 NZ_CAJZAO010000176.1 Protein Homology CDS 17738 18073 . + 0 ID=cds-WP_011880399.1;Parent=gene-LDO50_RS16345;Dbxref=GenBank:WP_011880399.1;Name=WP_011880399.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726033.1;locus_tag=LDO50_RS16345;product=c-type cytochrome;protein_id=WP_011880399.1;transl_table=11 NZ_CAJZAO010000176.1 RefSeq gene 18096 19100 . + . ID=gene-LDO50_RS16350;Name=LDO50_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16350;old_locus_tag=BVI1335_2570021 NZ_CAJZAO010000176.1 Protein Homology CDS 18096 19100 . + 0 ID=cds-WP_011880400.1;Parent=gene-LDO50_RS16350;Dbxref=GenBank:WP_011880400.1;Name=WP_011880400.1;Ontology_term=GO:0009691,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880400.1;locus_tag=LDO50_RS16350;product=TIGR00730 family Rossman fold protein;protein_id=WP_011880400.1;transl_table=11 NZ_CAJZAO010000176.1 RefSeq gene 19241 19462 . + . ID=gene-LDO50_RS16355;Name=LDO50_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16355;old_locus_tag=BVI1335_2570023 NZ_CAJZAO010000176.1 Protein Homology CDS 19241 19462 . + 0 ID=cds-WP_011880401.1;Parent=gene-LDO50_RS16355;Dbxref=GenBank:WP_011880401.1;Name=WP_011880401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880401.1;locus_tag=LDO50_RS16355;product=hypothetical protein;protein_id=WP_011880401.1;transl_table=11 NZ_CAJZAO010000176.1 RefSeq gene 19664 20297 . + . ID=gene-LDO50_RS16360;Name=LDO50_RS16360;end_range=20297,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16360;partial=true NZ_CAJZAO010000176.1 Protein Homology CDS 19664 20297 . + 0 ID=cds-WP_253074463.1;Parent=gene-LDO50_RS16360;Dbxref=GenBank:WP_253074463.1;Name=WP_253074463.1;Ontology_term=GO:1902358,GO:0015116,GO:0016020;end_range=20297,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488350.1;locus_tag=LDO50_RS16360;partial=true;product=SulP family inorganic anion transporter;protein_id=WP_253074463.1;transl_table=11 ##sequence-region NZ_CAJZAO010000177.1 1 10206 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000177.1 RefSeq region 1 10206 . + . ID=NZ_CAJZAO010000177.1:1..10206;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_258 NZ_CAJZAO010000177.1 RefSeq gene 1 825 . + . ID=gene-LDO50_RS16365;Name=LDO50_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16365;old_locus_tag=BVI1335_2580001;partial=true;start_range=.,1 NZ_CAJZAO010000177.1 Protein Homology CDS 1 825 . + 0 ID=cds-WP_224019904.1;Parent=gene-LDO50_RS16365;Dbxref=GenBank:WP_224019904.1;Name=WP_224019904.1;Ontology_term=GO:0015103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=inorganic anion transmembrane transporter activity|0015103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488350.1;locus_tag=LDO50_RS16365;partial=true;product=SulP family inorganic anion transporter;protein_id=WP_224019904.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000177.1 RefSeq gene 1227 2390 . + . ID=gene-LDO50_RS16370;Name=LDO50_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16370;old_locus_tag=BVI1335_2580003 NZ_CAJZAO010000177.1 Protein Homology CDS 1227 2390 . + 0 ID=cds-WP_011880403.1;Parent=gene-LDO50_RS16370;Dbxref=GenBank:WP_011880403.1;Name=WP_011880403.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004631563.1;locus_tag=LDO50_RS16370;product=GGDEF domain-containing protein;protein_id=WP_011880403.1;transl_table=11 NZ_CAJZAO010000177.1 RefSeq pseudogene 2678 2974 . - . ID=gene-LDO50_RS16375;Name=LDO50_RS16375;end_range=2974,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS16375;old_locus_tag=BVI1335_2580004;partial=true;pseudo=true NZ_CAJZAO010000177.1 Protein Homology CDS 2678 2974 . - 0 ID=cds-LDO50_RS16375;Parent=gene-LDO50_RS16375;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677;end_range=2974,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010961901.1;locus_tag=LDO50_RS16375;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CAJZAO010000177.1 RefSeq gene 3610 4248 . + . ID=gene-LDO50_RS16380;Name=LDO50_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16380;old_locus_tag=BVI1335_2580006 NZ_CAJZAO010000177.1 Protein Homology CDS 3610 4248 . + 0 ID=cds-WP_011880404.1;Parent=gene-LDO50_RS16380;Dbxref=GenBank:WP_011880404.1;Name=WP_011880404.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880238.1;locus_tag=LDO50_RS16380;product=response regulator;protein_id=WP_011880404.1;transl_table=11 NZ_CAJZAO010000177.1 RefSeq pseudogene 4986 5525 . + . ID=gene-LDO50_RS16385;Name=LDO50_RS16385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS16385;partial=true;pseudo=true;start_range=.,4986 NZ_CAJZAO010000177.1 Protein Homology CDS 4986 5525 . + 0 ID=cds-LDO50_RS16385;Parent=gene-LDO50_RS16385;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019717610.1;locus_tag=LDO50_RS16385;partial=true;product=aldo/keto reductase;pseudo=true;start_range=.,4986;transl_table=11 NZ_CAJZAO010000177.1 RefSeq gene 5956 6606 . - . ID=gene-LDO50_RS16390;Name=LDO50_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16390;old_locus_tag=BVI1335_2580011 NZ_CAJZAO010000177.1 Protein Homology CDS 5956 6606 . - 0 ID=cds-WP_011880406.1;Parent=gene-LDO50_RS16390;Dbxref=GenBank:WP_011880406.1;Name=WP_011880406.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603916.1;locus_tag=LDO50_RS16390;product=BON domain-containing protein;protein_id=WP_011880406.1;transl_table=11 NZ_CAJZAO010000177.1 RefSeq gene 6836 7501 . + . ID=gene-LDO50_RS16395;Name=LDO50_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16395;old_locus_tag=BVI1335_2580012 NZ_CAJZAO010000177.1 Protein Homology CDS 6836 7501 . + 0 ID=cds-WP_011880407.1;Parent=gene-LDO50_RS16395;Dbxref=GenBank:WP_011880407.1;Name=WP_011880407.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880407.1;locus_tag=LDO50_RS16395;product=nitroreductase family protein;protein_id=WP_011880407.1;transl_table=11 NZ_CAJZAO010000177.1 RefSeq gene 7639 8073 . - . ID=gene-LDO50_RS16400;Name=LDO50_RS16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16400;old_locus_tag=BVI1335_2580013 NZ_CAJZAO010000177.1 Protein Homology CDS 7639 8073 . - 0 ID=cds-WP_011880408.1;Parent=gene-LDO50_RS16400;Dbxref=GenBank:WP_011880408.1;Name=WP_011880408.1;Ontology_term=GO:0009408,GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415428.1;locus_tag=LDO50_RS16400;product=Hsp20/alpha crystallin family protein;protein_id=WP_011880408.1;transl_table=11 NZ_CAJZAO010000177.1 RefSeq gene 8255 8530 . - . ID=gene-LDO50_RS16405;Name=LDO50_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16405;old_locus_tag=BVI1335_2580014 NZ_CAJZAO010000177.1 Protein Homology CDS 8255 8530 . - 0 ID=cds-WP_011880409.1;Parent=gene-LDO50_RS16405;Dbxref=GenBank:WP_011880409.1;Name=WP_011880409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726047.1;locus_tag=LDO50_RS16405;product=DUF1488 domain-containing protein;protein_id=WP_011880409.1;transl_table=11 NZ_CAJZAO010000177.1 RefSeq gene 8572 9042 . - . ID=gene-LDO50_RS16410;Name=LDO50_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16410;old_locus_tag=BVI1335_2580015 NZ_CAJZAO010000177.1 Protein Homology CDS 8572 9042 . - 0 ID=cds-WP_011880410.1;Parent=gene-LDO50_RS16410;Dbxref=GenBank:WP_011880410.1;Name=WP_011880410.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880410.1;locus_tag=LDO50_RS16410;product=universal stress protein;protein_id=WP_011880410.1;transl_table=11 NZ_CAJZAO010000177.1 RefSeq gene 9171 9593 . - . ID=gene-LDO50_RS16415;Name=LDO50_RS16415;end_range=9593,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16415;old_locus_tag=BVI1335_2580016;partial=true NZ_CAJZAO010000177.1 Protein Homology CDS 9171 9593 . - 0 ID=cds-WP_443797789.1;Parent=gene-LDO50_RS16415;Dbxref=GenBank:WP_443797789.1;Name=WP_443797789.1;end_range=9593,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880411.1;locus_tag=LDO50_RS16415;partial=true;product=hypothetical protein;protein_id=WP_443797789.1;transl_table=11 NZ_CAJZAO010000177.1 RefSeq gene 9604 9832 . - . ID=gene-LDO50_RS31635;Name=LDO50_RS31635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31635;partial=true;start_range=.,9604 NZ_CAJZAO010000177.1 GeneMarkS-2+ CDS 9604 9832 . - 0 ID=cds-WP_443797790.1;Parent=gene-LDO50_RS31635;Dbxref=GenBank:WP_443797790.1;Name=WP_443797790.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS31635;partial=true;product=hypothetical protein;protein_id=WP_443797790.1;start_range=.,9604;transl_table=11 ##sequence-region NZ_CAJZAO010000178.1 1 2689 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000178.1 RefSeq region 1 2689 . + . ID=NZ_CAJZAO010000178.1:1..2689;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_259 NZ_CAJZAO010000178.1 RefSeq pseudogene 1 892 . + . ID=gene-LDO50_RS16420;Name=LDO50_RS16420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS16420;old_locus_tag=BVI1335_2590001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000178.1 Protein Homology CDS 1 892 . + 1 ID=cds-LDO50_RS16420;Parent=gene-LDO50_RS16420;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726109.1;locus_tag=LDO50_RS16420;partial=true;product=transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000178.1 RefSeq gene 1025 2689 . + . ID=gene-LDO50_RS16425;Name=LDO50_RS16425;end_range=2689,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16425;partial=true NZ_CAJZAO010000178.1 Protein Homology CDS 1025 2689 . + 0 ID=cds-WP_224019906.1;Parent=gene-LDO50_RS16425;Dbxref=GenBank:WP_224019906.1;Name=WP_224019906.1;Ontology_term=GO:0016810,GO:0046872;end_range=2689,.;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726107.1;locus_tag=LDO50_RS16425;partial=true;product=amidohydrolase;protein_id=WP_224019906.1;transl_table=11 ##sequence-region NZ_CAJZAO010000179.1 1 70374 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000179.1 RefSeq region 1 70374 . + . ID=NZ_CAJZAO010000179.1:1..70374;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_26 NZ_CAJZAO010000179.1 RefSeq gene 61 1041 . - . ID=gene-LDO50_RS16430;Name=LDO50_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16430;old_locus_tag=BVI1335_260002 NZ_CAJZAO010000179.1 Protein Homology CDS 61 1041 . - 0 ID=cds-WP_059464082.1;Parent=gene-LDO50_RS16430;Dbxref=GenBank:WP_059464082.1;Name=WP_059464082.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658957.1;locus_tag=LDO50_RS16430;product=aldo/keto reductase;protein_id=WP_059464082.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 1206 1880 . - . ID=gene-LDO50_RS16435;Name=LDO50_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16435;old_locus_tag=BVI1335_260003 NZ_CAJZAO010000179.1 Protein Homology CDS 1206 1880 . - 0 ID=cds-WP_011882342.1;Parent=gene-LDO50_RS16435;Dbxref=GenBank:WP_011882342.1;Name=WP_011882342.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483966.1;locus_tag=LDO50_RS16435;product=MarC family protein;protein_id=WP_011882342.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 1996 2796 . - . ID=gene-LDO50_RS16440;Name=LDO50_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16440;old_locus_tag=BVI1335_260004 NZ_CAJZAO010000179.1 Protein Homology CDS 1996 2796 . - 0 ID=cds-WP_014724795.1;Parent=gene-LDO50_RS16440;Dbxref=GenBank:WP_014724795.1;Name=WP_014724795.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724795.1;locus_tag=LDO50_RS16440;product=enoyl-CoA hydratase-related protein;protein_id=WP_014724795.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 2837 4159 . - . ID=gene-LDO50_RS16445;Name=paaK;gbkey=Gene;gene=paaK;gene_biotype=protein_coding;locus_tag=LDO50_RS16445;old_locus_tag=BVI1335_260005 NZ_CAJZAO010000179.1 Protein Homology CDS 2837 4159 . - 0 ID=cds-WP_045577929.1;Parent=gene-LDO50_RS16445;Dbxref=GenBank:WP_045577929.1;Name=WP_045577929.1;Ontology_term=GO:0010124,GO:0047475;gbkey=CDS;gene=paaK;go_function=phenylacetate-CoA ligase activity|0047475||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478906.1;locus_tag=LDO50_RS16445;product=phenylacetate--CoA ligase PaaK;protein_id=WP_045577929.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 4218 5771 . - . ID=gene-LDO50_RS16450;Name=LDO50_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16450;old_locus_tag=BVI1335_260006 NZ_CAJZAO010000179.1 Protein Homology CDS 4218 5771 . - 0 ID=cds-WP_059734412.1;Parent=gene-LDO50_RS16450;Dbxref=GenBank:WP_059734412.1;Name=WP_059734412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754823.1;locus_tag=LDO50_RS16450;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_059734412.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 6301 7389 . + . ID=gene-LDO50_RS16455;Name=LDO50_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16455;old_locus_tag=BVI1335_260008 NZ_CAJZAO010000179.1 Protein Homology CDS 6301 7389 . + 0 ID=cds-WP_011882346.1;Parent=gene-LDO50_RS16455;Dbxref=GenBank:WP_011882346.1;Name=WP_011882346.1;Ontology_term=GO:0006812,GO:0006816,GO:0008324,GO:0015369,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,calcium:proton antiporter activity|0015369||IEA;go_process=monoatomic cation transport|0006812||IEA,calcium ion transport|0006816||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009976505.1;locus_tag=LDO50_RS16455;product=calcium:proton antiporter;protein_id=WP_011882346.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 7469 8374 . - . ID=gene-LDO50_RS16460;Name=LDO50_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16460;old_locus_tag=BVI1335_260010 NZ_CAJZAO010000179.1 Protein Homology CDS 7469 8374 . - 0 ID=cds-WP_014724790.1;Parent=gene-LDO50_RS16460;Dbxref=GenBank:WP_014724790.1;Name=WP_014724790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724790.1;locus_tag=LDO50_RS16460;product=LysR substrate-binding domain-containing protein;protein_id=WP_014724790.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 8546 9514 . - . ID=gene-LDO50_RS16465;Name=LDO50_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16465;old_locus_tag=BVI1335_260011 NZ_CAJZAO010000179.1 Protein Homology CDS 8546 9514 . - 0 ID=cds-WP_011882348.1;Parent=gene-LDO50_RS16465;Dbxref=GenBank:WP_011882348.1;Name=WP_011882348.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329160.1;locus_tag=LDO50_RS16465;product=LysR family transcriptional regulator;protein_id=WP_011882348.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 9809 9937 . - . ID=gene-LDO50_RS30850;Name=LDO50_RS30850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30850;old_locus_tag=BVI1335_260012 NZ_CAJZAO010000179.1 GeneMarkS-2+ CDS 9809 9937 . - 0 ID=cds-WP_014724788.1;Parent=gene-LDO50_RS30850;Dbxref=GenBank:WP_014724788.1;Name=WP_014724788.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS30850;product=hypothetical protein;protein_id=WP_014724788.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 9876 11051 . + . ID=gene-LDO50_RS16470;Name=LDO50_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16470;old_locus_tag=BVI1335_260013 NZ_CAJZAO010000179.1 Protein Homology CDS 9876 11051 . + 0 ID=cds-WP_059738434.1;Parent=gene-LDO50_RS16470;Dbxref=GenBank:WP_059738434.1;Name=WP_059738434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754166.1;locus_tag=LDO50_RS16470;product=HPP family protein;protein_id=WP_059738434.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 11163 11576 . + . ID=gene-LDO50_RS16475;Name=LDO50_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16475;old_locus_tag=BVI1335_260014 NZ_CAJZAO010000179.1 Protein Homology CDS 11163 11576 . + 0 ID=cds-WP_011882350.1;Parent=gene-LDO50_RS16475;Dbxref=GenBank:WP_011882350.1;Name=WP_011882350.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899076.1;locus_tag=LDO50_RS16475;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_011882350.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 11605 13392 . + . ID=gene-LDO50_RS16480;Name=LDO50_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16480;old_locus_tag=BVI1335_260015 NZ_CAJZAO010000179.1 Protein Homology CDS 11605 13392 . + 0 ID=cds-WP_011882351.1;Parent=gene-LDO50_RS16480;Dbxref=GenBank:WP_011882351.1;Name=WP_011882351.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766047.1;locus_tag=LDO50_RS16480;product=chloride channel protein;protein_id=WP_011882351.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 13794 14126 . + . ID=gene-LDO50_RS16485;Name=LDO50_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16485;old_locus_tag=BVI1335_260016 NZ_CAJZAO010000179.1 Protein Homology CDS 13794 14126 . + 0 ID=cds-WP_174479779.1;Parent=gene-LDO50_RS16485;Dbxref=GenBank:WP_174479779.1;Name=WP_174479779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899074.1;locus_tag=LDO50_RS16485;product=hypothetical protein;protein_id=WP_174479779.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 14250 14570 . - . ID=gene-LDO50_RS16490;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=LDO50_RS16490;old_locus_tag=BVI1335_260018 NZ_CAJZAO010000179.1 Protein Homology CDS 14250 14570 . - 0 ID=cds-WP_014724785.1;Parent=gene-LDO50_RS16490;Dbxref=GenBank:WP_014724785.1;Name=WP_014724785.1;Ontology_term=GO:0004731,GO:0016154;gbkey=CDS;gene=ppnP;go_function=purine-nucleoside phosphorylase activity|0004731||IEA,pyrimidine-nucleoside phosphorylase activity|0016154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658970.1;locus_tag=LDO50_RS16490;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_014724785.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 14734 15636 . - . ID=gene-LDO50_RS16495;Name=LDO50_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16495;old_locus_tag=BVI1335_260019 NZ_CAJZAO010000179.1 Protein Homology CDS 14734 15636 . - 0 ID=cds-WP_014724784.1;Parent=gene-LDO50_RS16495;Dbxref=GenBank:WP_014724784.1;Name=WP_014724784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603290.1;locus_tag=LDO50_RS16495;product=LysR substrate-binding domain-containing protein;protein_id=WP_014724784.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 15817 16050 . + . ID=gene-LDO50_RS16500;Name=LDO50_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16500;old_locus_tag=BVI1335_260020 NZ_CAJZAO010000179.1 GeneMarkS-2+ CDS 15817 16050 . + 0 ID=cds-WP_045577924.1;Parent=gene-LDO50_RS16500;Dbxref=GenBank:WP_045577924.1;Name=WP_045577924.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS16500;product=hypothetical protein;protein_id=WP_045577924.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 16093 17415 . + . ID=gene-LDO50_RS16505;Name=LDO50_RS16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16505;old_locus_tag=BVI1335_260021 NZ_CAJZAO010000179.1 Protein Homology CDS 16093 17415 . + 0 ID=cds-WP_011882356.1;Parent=gene-LDO50_RS16505;Dbxref=GenBank:WP_011882356.1;Name=WP_011882356.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004556566.1;locus_tag=LDO50_RS16505;product=MFS transporter;protein_id=WP_011882356.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 17501 18577 . - . ID=gene-LDO50_RS16510;Name=LDO50_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16510;old_locus_tag=BVI1335_260022 NZ_CAJZAO010000179.1 Protein Homology CDS 17501 18577 . - 0 ID=cds-WP_441301375.1;Parent=gene-LDO50_RS16510;Dbxref=GenBank:WP_441301375.1;Name=WP_441301375.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009968214.1;locus_tag=LDO50_RS16510;product=porin;protein_id=WP_441301375.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 18668 19087 . - . ID=gene-LDO50_RS16515;Name=LDO50_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16515;old_locus_tag=BVI1335_260023 NZ_CAJZAO010000179.1 Protein Homology CDS 18668 19087 . - 0 ID=cds-WP_014724781.1;Parent=gene-LDO50_RS16515;Dbxref=GenBank:WP_014724781.1;Name=WP_014724781.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547564.1;locus_tag=LDO50_RS16515;product=DoxX family protein;protein_id=WP_014724781.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 19254 20531 . - . ID=gene-LDO50_RS16520;Name=LDO50_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16520;old_locus_tag=BVI1335_260024 NZ_CAJZAO010000179.1 Protein Homology CDS 19254 20531 . - 0 ID=cds-WP_011882359.1;Parent=gene-LDO50_RS16520;Dbxref=GenBank:WP_011882359.1;Name=WP_011882359.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396899.1;locus_tag=LDO50_RS16520;product=c-type cytochrome;protein_id=WP_011882359.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 20534 22153 . - . ID=gene-LDO50_RS16525;Name=LDO50_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16525;old_locus_tag=BVI1335_260025 NZ_CAJZAO010000179.1 Protein Homology CDS 20534 22153 . - 0 ID=cds-WP_011882360.1;Parent=gene-LDO50_RS16525;Dbxref=GenBank:WP_011882360.1;Name=WP_011882360.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396898.1;locus_tag=LDO50_RS16525;product=GMC family oxidoreductase;protein_id=WP_011882360.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 22153 22659 . - . ID=gene-LDO50_RS16530;Name=LDO50_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16530;old_locus_tag=BVI1335_260026 NZ_CAJZAO010000179.1 Protein Homology CDS 22153 22659 . - 0 ID=cds-WP_011882361.1;Parent=gene-LDO50_RS16530;Dbxref=GenBank:WP_011882361.1;Name=WP_011882361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009900299.1;locus_tag=LDO50_RS16530;product=sugar dehydrogenase complex small subunit;protein_id=WP_011882361.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 22962 29021 . + . ID=gene-LDO50_RS16535;Name=LDO50_RS16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16535;old_locus_tag=BVI1335_260027 NZ_CAJZAO010000179.1 Protein Homology CDS 22962 29021 . + 0 ID=cds-WP_224019908.1;Parent=gene-LDO50_RS16535;Dbxref=GenBank:WP_224019908.1;Name=WP_224019908.1;Ontology_term=GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493377.1;locus_tag=LDO50_RS16535;product=MG2 domain-containing protein;protein_id=WP_224019908.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 29032 31263 . + . ID=gene-LDO50_RS16540;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=LDO50_RS16540;old_locus_tag=BVI1335_260028 NZ_CAJZAO010000179.1 Protein Homology CDS 29032 31263 . + 0 ID=cds-WP_224019909.1;Parent=gene-LDO50_RS16540;Dbxref=GenBank:WP_224019909.1;Name=WP_224019909.1;Ontology_term=GO:0009252,GO:0003824,GO:0009274;gbkey=CDS;gene=pbpC;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724777.1;locus_tag=LDO50_RS16540;product=penicillin-binding protein 1C;protein_id=WP_224019909.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 31388 32068 . + . ID=gene-LDO50_RS16545;Name=LDO50_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16545;old_locus_tag=BVI1335_260029 NZ_CAJZAO010000179.1 Protein Homology CDS 31388 32068 . + 0 ID=cds-WP_224019910.1;Parent=gene-LDO50_RS16545;Dbxref=GenBank:WP_224019910.1;Name=WP_224019910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478873.1;locus_tag=LDO50_RS16545;product=hypothetical protein;protein_id=WP_224019910.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 32116 33363 . - . ID=gene-LDO50_RS16550;Name=LDO50_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16550;old_locus_tag=BVI1335_260030 NZ_CAJZAO010000179.1 Protein Homology CDS 32116 33363 . - 0 ID=cds-WP_224019911.1;Parent=gene-LDO50_RS16550;Dbxref=GenBank:WP_224019911.1;Name=WP_224019911.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756332.1;locus_tag=LDO50_RS16550;product=multidrug effflux MFS transporter;protein_id=WP_224019911.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 33765 34304 . + . ID=gene-LDO50_RS16555;Name=LDO50_RS16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16555;old_locus_tag=BVI1335_260031 NZ_CAJZAO010000179.1 Protein Homology CDS 33765 34304 . + 0 ID=cds-WP_176321163.1;Parent=gene-LDO50_RS16555;Dbxref=GenBank:WP_176321163.1;Name=WP_176321163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415708.1;locus_tag=LDO50_RS16555;product=hypothetical protein;protein_id=WP_176321163.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 34392 35288 . - . ID=gene-LDO50_RS16560;Name=LDO50_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16560;old_locus_tag=BVI1335_260032 NZ_CAJZAO010000179.1 Protein Homology CDS 34392 35288 . - 0 ID=cds-WP_011882367.1;Parent=gene-LDO50_RS16560;Dbxref=GenBank:WP_011882367.1;Name=WP_011882367.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410345.1;locus_tag=LDO50_RS16560;product=glutamate/aspartate ABC transporter substrate-binding protein;protein_id=WP_011882367.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 35726 37372 . + . ID=gene-LDO50_RS16565;Name=LDO50_RS16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16565;old_locus_tag=BVI1335_260033 NZ_CAJZAO010000179.1 Protein Homology CDS 35726 37372 . + 0 ID=cds-WP_045577919.1;Parent=gene-LDO50_RS16565;Dbxref=GenBank:WP_045577919.1;Name=WP_045577919.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492903.1;locus_tag=LDO50_RS16565;product=S8 family peptidase;protein_id=WP_045577919.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 38093 40876 . + . ID=gene-LDO50_RS16570;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=LDO50_RS16570;old_locus_tag=BVI1335_260035 NZ_CAJZAO010000179.1 Protein Homology CDS 38093 40876 . + 0 ID=cds-WP_081056100.1;Parent=gene-LDO50_RS16570;Dbxref=GenBank:WP_081056100.1;Name=WP_081056100.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882370.1;locus_tag=LDO50_RS16570;product=magnesium-translocating P-type ATPase;protein_id=WP_081056100.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 40924 41208 . - . ID=gene-LDO50_RS16575;Name=LDO50_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16575;old_locus_tag=BVI1335_260036 NZ_CAJZAO010000179.1 Protein Homology CDS 40924 41208 . - 0 ID=cds-WP_034195131.1;Parent=gene-LDO50_RS16575;Dbxref=GenBank:WP_034195131.1;Name=WP_034195131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494672.1;locus_tag=LDO50_RS16575;product=hypothetical protein;protein_id=WP_034195131.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 41280 42155 . - . ID=gene-LDO50_RS16580;Name=LDO50_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16580;old_locus_tag=BVI1335_260037 NZ_CAJZAO010000179.1 Protein Homology CDS 41280 42155 . - 0 ID=cds-WP_034195132.1;Parent=gene-LDO50_RS16580;Dbxref=GenBank:WP_034195132.1;Name=WP_034195132.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478865.1;locus_tag=LDO50_RS16580;product=LysR family transcriptional regulator;protein_id=WP_034195132.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 42225 42491 . + . ID=gene-LDO50_RS16585;Name=LDO50_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16585;old_locus_tag=BVI1335_260038 NZ_CAJZAO010000179.1 Protein Homology CDS 42225 42491 . + 0 ID=cds-WP_414016394.1;Parent=gene-LDO50_RS16585;Dbxref=GenBank:WP_414016394.1;Name=WP_414016394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756318.1;locus_tag=LDO50_RS16585;product=hypothetical protein;protein_id=WP_414016394.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 42671 43762 . + . ID=gene-LDO50_RS16590;Name=LDO50_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16590;old_locus_tag=BVI1335_260039 NZ_CAJZAO010000179.1 Protein Homology CDS 42671 43762 . + 0 ID=cds-WP_181709507.1;Parent=gene-LDO50_RS16590;Dbxref=GenBank:WP_181709507.1;Name=WP_181709507.1;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354880.1;locus_tag=LDO50_RS16590;product=serine hydrolase;protein_id=WP_181709507.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 43793 44029 . + . ID=gene-LDO50_RS16595;Name=LDO50_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16595;old_locus_tag=BVI1335_260040 NZ_CAJZAO010000179.1 Protein Homology CDS 43793 44029 . + 0 ID=cds-WP_046426382.1;Parent=gene-LDO50_RS16595;Dbxref=GenBank:WP_046426382.1;Name=WP_046426382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882375.1;locus_tag=LDO50_RS16595;product=DUF7661 family protein;protein_id=WP_046426382.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 44145 44600 . + . ID=gene-LDO50_RS16600;Name=LDO50_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16600;old_locus_tag=BVI1335_260041 NZ_CAJZAO010000179.1 Protein Homology CDS 44145 44600 . + 0 ID=cds-WP_046426380.1;Parent=gene-LDO50_RS16600;Dbxref=GenBank:WP_046426380.1;Name=WP_046426380.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478861.1;locus_tag=LDO50_RS16600;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_046426380.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 44671 45234 . + . ID=gene-LDO50_RS16605;Name=LDO50_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16605;old_locus_tag=BVI1335_260043 NZ_CAJZAO010000179.1 Protein Homology CDS 44671 45234 . + 0 ID=cds-WP_011882377.1;Parent=gene-LDO50_RS16605;Dbxref=GenBank:WP_011882377.1;Name=WP_011882377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396870.1;locus_tag=LDO50_RS16605;product=isochorismatase family protein;protein_id=WP_011882377.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 45231 46670 . + . ID=gene-LDO50_RS16610;Name=LDO50_RS16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16610;old_locus_tag=BVI1335_260042 NZ_CAJZAO010000179.1 Protein Homology CDS 45231 46670 . + 0 ID=cds-WP_034195136.1;Parent=gene-LDO50_RS16610;Dbxref=GenBank:WP_034195136.1;Name=WP_034195136.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882378.1;locus_tag=LDO50_RS16610;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_034195136.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 46747 48168 . - . ID=gene-LDO50_RS16615;Name=LDO50_RS16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16615;old_locus_tag=BVI1335_260044 NZ_CAJZAO010000179.1 Protein Homology CDS 46747 48168 . - 0 ID=cds-WP_034195137.1;Parent=gene-LDO50_RS16615;Dbxref=GenBank:WP_034195137.1;Name=WP_034195137.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604151.1;locus_tag=LDO50_RS16615;product=aminotransferase-like domain-containing protein;protein_id=WP_034195137.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 48331 50655 . + . ID=gene-LDO50_RS16620;Name=LDO50_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16620;old_locus_tag=BVI1335_260045 NZ_CAJZAO010000179.1 Protein Homology CDS 48331 50655 . + 0 ID=cds-WP_175983919.1;Parent=gene-LDO50_RS16620;Dbxref=GenBank:WP_175983919.1;Name=WP_175983919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752344.1;locus_tag=LDO50_RS16620;product=FdhF/YdeP family oxidoreductase;protein_id=WP_175983919.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 50668 51537 . + . ID=gene-LDO50_RS16625;Name=LDO50_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16625;old_locus_tag=BVI1335_260046 NZ_CAJZAO010000179.1 Protein Homology CDS 50668 51537 . + 0 ID=cds-WP_224019913.1;Parent=gene-LDO50_RS16625;Dbxref=GenBank:WP_224019913.1;Name=WP_224019913.1;Ontology_term=GO:0005254;gbkey=CDS;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524063.1;locus_tag=LDO50_RS16625;product=bestrophin family protein;protein_id=WP_224019913.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 51740 52072 . + . ID=gene-LDO50_RS16630;Name=LDO50_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16630;old_locus_tag=BVI1335_260047 NZ_CAJZAO010000179.1 Protein Homology CDS 51740 52072 . + 0 ID=cds-WP_011882382.1;Parent=gene-LDO50_RS16630;Dbxref=GenBank:WP_011882382.1;Name=WP_011882382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396861.1;locus_tag=LDO50_RS16630;product=hypothetical protein;protein_id=WP_011882382.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 52176 53765 . + . ID=gene-LDO50_RS16635;Name=LDO50_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16635;old_locus_tag=BVI1335_260048 NZ_CAJZAO010000179.1 Protein Homology CDS 52176 53765 . + 0 ID=cds-WP_059560571.1;Parent=gene-LDO50_RS16635;Dbxref=GenBank:WP_059560571.1;Name=WP_059560571.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216866.1;locus_tag=LDO50_RS16635;product=ABC transporter substrate-binding protein;protein_id=WP_059560571.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 53941 55248 . - . ID=gene-LDO50_RS16640;Name=LDO50_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16640;old_locus_tag=BVI1335_260049 NZ_CAJZAO010000179.1 Protein Homology CDS 53941 55248 . - 0 ID=cds-WP_175949061.1;Parent=gene-LDO50_RS16640;Dbxref=GenBank:WP_175949061.1;Name=WP_175949061.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547530.1;locus_tag=LDO50_RS16640;product=Nramp family divalent metal transporter;protein_id=WP_175949061.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 55343 56599 . - . ID=gene-LDO50_RS16645;Name=LDO50_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16645;old_locus_tag=BVI1335_260050 NZ_CAJZAO010000179.1 Protein Homology CDS 55343 56599 . - 0 ID=cds-WP_041494109.1;Parent=gene-LDO50_RS16645;Dbxref=GenBank:WP_041494109.1;Name=WP_041494109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366239.1;locus_tag=LDO50_RS16645;product=oxalate decarboxylase family bicupin;protein_id=WP_041494109.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 56908 58242 . - . ID=gene-LDO50_RS16650;Name=LDO50_RS16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16650;old_locus_tag=BVI1335_260051 NZ_CAJZAO010000179.1 Protein Homology CDS 56908 58242 . - 0 ID=cds-WP_224019914.1;Parent=gene-LDO50_RS16650;Dbxref=GenBank:WP_224019914.1;Name=WP_224019914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496989.1;locus_tag=LDO50_RS16650;product=type II toxin-antitoxin system HipA family toxin;protein_id=WP_224019914.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 58246 58494 . - . ID=gene-LDO50_RS16655;Name=LDO50_RS16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16655;old_locus_tag=BVI1335_260052 NZ_CAJZAO010000179.1 Protein Homology CDS 58246 58494 . - 0 ID=cds-WP_011882387.1;Parent=gene-LDO50_RS16655;Dbxref=GenBank:WP_011882387.1;Name=WP_011882387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483523.1;locus_tag=LDO50_RS16655;product=helix-turn-helix domain-containing protein;protein_id=WP_011882387.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 58750 59640 . + . ID=gene-LDO50_RS16660;Name=sapR;gbkey=Gene;gene=sapR;gene_biotype=protein_coding;locus_tag=LDO50_RS16660;old_locus_tag=BVI1335_260053 NZ_CAJZAO010000179.1 Protein Homology CDS 58750 59640 . + 0 ID=cds-WP_011882388.1;Parent=gene-LDO50_RS16660;Dbxref=GenBank:WP_011882388.1;Name=WP_011882388.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=sapR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216865.1;locus_tag=LDO50_RS16660;product=sap1 transcriptional regulator SapR;protein_id=WP_011882388.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 59657 60220 . + . ID=gene-LDO50_RS16665;Name=ddpX;gbkey=Gene;gene=ddpX;gene_biotype=protein_coding;locus_tag=LDO50_RS16665;old_locus_tag=BVI1335_260054 NZ_CAJZAO010000179.1 Protein Homology CDS 59657 60220 . + 0 ID=cds-WP_059474849.1;Parent=gene-LDO50_RS16665;Dbxref=GenBank:WP_059474849.1;Name=WP_059474849.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;gene=ddpX;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366241.1;locus_tag=LDO50_RS16665;product=D-alanyl-D-alanine dipeptidase;protein_id=WP_059474849.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 60294 61895 . + . ID=gene-LDO50_RS16670;Name=LDO50_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16670;old_locus_tag=BVI1335_260055 NZ_CAJZAO010000179.1 Protein Homology CDS 60294 61895 . + 0 ID=cds-WP_224019915.1;Parent=gene-LDO50_RS16670;Dbxref=GenBank:WP_224019915.1;Name=WP_224019915.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766074.1;locus_tag=LDO50_RS16670;product=ABC transporter substrate-binding protein;protein_id=WP_224019915.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 61906 62976 . + . ID=gene-LDO50_RS16675;Name=LDO50_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16675;old_locus_tag=BVI1335_260056 NZ_CAJZAO010000179.1 Protein Homology CDS 61906 62976 . + 0 ID=cds-WP_014724756.1;Parent=gene-LDO50_RS16675;Dbxref=GenBank:WP_014724756.1;Name=WP_014724756.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882391.1;locus_tag=LDO50_RS16675;product=ABC transporter permease;protein_id=WP_014724756.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 63043 63957 . + . ID=gene-LDO50_RS16680;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=LDO50_RS16680;old_locus_tag=BVI1335_260057 NZ_CAJZAO010000179.1 Protein Homology CDS 63043 63957 . + 0 ID=cds-WP_011882392.1;Parent=gene-LDO50_RS16680;Dbxref=GenBank:WP_011882392.1;Name=WP_011882392.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikC;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899028.1;locus_tag=LDO50_RS16680;product=nickel transporter permease;protein_id=WP_011882392.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 63959 64873 . + . ID=gene-LDO50_RS16685;Name=LDO50_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16685;old_locus_tag=BVI1335_260058 NZ_CAJZAO010000179.1 Protein Homology CDS 63959 64873 . + 0 ID=cds-WP_014724755.1;Parent=gene-LDO50_RS16685;Dbxref=GenBank:WP_014724755.1;Name=WP_014724755.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756294.1;locus_tag=LDO50_RS16685;product=ABC transporter ATP-binding protein;protein_id=WP_014724755.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 64870 65631 . + . ID=gene-LDO50_RS16690;Name=LDO50_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16690;old_locus_tag=BVI1335_260059 NZ_CAJZAO010000179.1 Protein Homology CDS 64870 65631 . + 0 ID=cds-WP_014724754.1;Parent=gene-LDO50_RS16690;Dbxref=GenBank:WP_014724754.1;Name=WP_014724754.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882394.1;locus_tag=LDO50_RS16690;product=ABC transporter ATP-binding protein;protein_id=WP_014724754.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 65769 66023 . + . ID=gene-LDO50_RS16695;Name=LDO50_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16695;old_locus_tag=BVI1335_260060 NZ_CAJZAO010000179.1 Protein Homology CDS 65769 66023 . + 0 ID=cds-WP_011882395.1;Parent=gene-LDO50_RS16695;Dbxref=GenBank:WP_011882395.1;Name=WP_011882395.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659025.1;locus_tag=LDO50_RS16695;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_011882395.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 66171 67067 . - . ID=gene-LDO50_RS16700;Name=LDO50_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16700;old_locus_tag=BVI1335_260061 NZ_CAJZAO010000179.1 Protein Homology CDS 66171 67067 . - 0 ID=cds-WP_011882396.1;Parent=gene-LDO50_RS16700;Dbxref=GenBank:WP_011882396.1;Name=WP_011882396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882396.1;locus_tag=LDO50_RS16700;product=LysR family transcriptional regulator;protein_id=WP_011882396.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 67185 68120 . + . ID=gene-LDO50_RS16705;Name=LDO50_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16705;old_locus_tag=BVI1335_260062 NZ_CAJZAO010000179.1 Protein Homology CDS 67185 68120 . + 0 ID=cds-WP_224019916.1;Parent=gene-LDO50_RS16705;Dbxref=GenBank:WP_224019916.1;Name=WP_224019916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882397.1;locus_tag=LDO50_RS16705;product=NmrA family NAD(P)-binding protein;protein_id=WP_224019916.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 68457 68765 . + . ID=gene-LDO50_RS16710;Name=LDO50_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16710;old_locus_tag=BVI1335_260063 NZ_CAJZAO010000179.1 Protein Homology CDS 68457 68765 . + 0 ID=cds-WP_011882398.1;Parent=gene-LDO50_RS16710;Dbxref=GenBank:WP_011882398.1;Name=WP_011882398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882398.1;locus_tag=LDO50_RS16710;product=hypothetical protein;protein_id=WP_011882398.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 69126 69461 . + . ID=gene-LDO50_RS16715;Name=LDO50_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16715;old_locus_tag=BVI1335_260064 NZ_CAJZAO010000179.1 Protein Homology CDS 69126 69461 . + 0 ID=cds-WP_014724751.1;Parent=gene-LDO50_RS16715;Dbxref=GenBank:WP_014724751.1;Name=WP_014724751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478830.1;locus_tag=LDO50_RS16715;product=hypothetical protein;protein_id=WP_014724751.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 69487 70082 . - . ID=gene-LDO50_RS16720;Name=LDO50_RS16720;end_range=70082,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16720;old_locus_tag=BVI1335_260065;partial=true NZ_CAJZAO010000179.1 Protein Homology CDS 69487 70082 . - 2 ID=cds-WP_443797791.1;Parent=gene-LDO50_RS16720;Dbxref=GenBank:WP_443797791.1;Name=WP_443797791.1;end_range=70082,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478829.1;locus_tag=LDO50_RS16720;partial=true;product=LysR substrate-binding domain-containing protein;protein_id=WP_443797791.1;transl_table=11 NZ_CAJZAO010000179.1 RefSeq gene 70168 70374 . + . ID=gene-LDO50_RS16725;Name=LDO50_RS16725;end_range=70374,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16725;partial=true NZ_CAJZAO010000179.1 GeneMarkS-2+ CDS 70168 70374 . + 0 ID=cds-WP_224019917.1;Parent=gene-LDO50_RS16725;Dbxref=GenBank:WP_224019917.1;Name=WP_224019917.1;end_range=70374,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS16725;partial=true;product=hypothetical protein;protein_id=WP_224019917.1;transl_table=11 ##sequence-region NZ_CAJZAO010000180.1 1 3347 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000180.1 RefSeq region 1 3347 . + . ID=NZ_CAJZAO010000180.1:1..3347;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_260 NZ_CAJZAO010000180.1 RefSeq gene 545 1279 . + . ID=gene-LDO50_RS16730;Name=LDO50_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16730;old_locus_tag=BVI1335_2600002 NZ_CAJZAO010000180.1 Protein Homology CDS 545 1279 . + 0 ID=cds-WP_011886087.1;Parent=gene-LDO50_RS16730;Dbxref=GenBank:WP_011886087.1;Name=WP_011886087.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334292.1;locus_tag=LDO50_RS16730;product=GntR family transcriptional regulator;protein_id=WP_011886087.1;transl_table=11 NZ_CAJZAO010000180.1 RefSeq gene 1414 2517 . + . ID=gene-LDO50_RS16735;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=LDO50_RS16735;old_locus_tag=BVI1335_2600003 NZ_CAJZAO010000180.1 Protein Homology CDS 1414 2517 . + 0 ID=cds-WP_014723684.1;Parent=gene-LDO50_RS16735;Dbxref=GenBank:WP_014723684.1;Name=WP_014723684.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008921875.1;locus_tag=LDO50_RS16735;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_014723684.1;transl_table=11 NZ_CAJZAO010000180.1 RefSeq gene 2510 3347 . + . ID=gene-LDO50_RS16740;Name=LDO50_RS16740;end_range=3347,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16740;partial=true NZ_CAJZAO010000180.1 Protein Homology CDS 2510 3347 . + 0 ID=cds-WP_224019918.1;Parent=gene-LDO50_RS16740;Dbxref=GenBank:WP_224019918.1;Name=WP_224019918.1;Ontology_term=GO:0005975,GO:0016787,GO:0097367;end_range=3347,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024455.1;locus_tag=LDO50_RS16740;partial=true;product=SIS domain-containing protein;protein_id=WP_224019918.1;transl_table=11 ##sequence-region NZ_CAJZAO010000181.1 1 14720 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000181.1 RefSeq region 1 14720 . + . ID=NZ_CAJZAO010000181.1:1..14720;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_261 NZ_CAJZAO010000181.1 RefSeq gene 1 594 . - . ID=gene-LDO50_RS16745;Name=LDO50_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16745;partial=true;start_range=.,1 NZ_CAJZAO010000181.1 Protein Homology CDS 1 594 . - 0 ID=cds-WP_224019919.1;Parent=gene-LDO50_RS16745;Dbxref=GenBank:WP_224019919.1;Name=WP_224019919.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401658.1;locus_tag=LDO50_RS16745;partial=true;product=PqiC family protein;protein_id=WP_224019919.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000181.1 RefSeq gene 591 2210 . - . ID=gene-LDO50_RS16750;Name=LDO50_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16750;old_locus_tag=BVI1335_2610002 NZ_CAJZAO010000181.1 Protein Homology CDS 591 2210 . - 0 ID=cds-WP_011883308.1;Parent=gene-LDO50_RS16750;Dbxref=GenBank:WP_011883308.1;Name=WP_011883308.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883308.1;locus_tag=LDO50_RS16750;product=PqiB family protein;protein_id=WP_011883308.1;transl_table=11 NZ_CAJZAO010000181.1 RefSeq gene 2203 2832 . - . ID=gene-LDO50_RS16755;Name=LDO50_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16755;old_locus_tag=BVI1335_2610003 NZ_CAJZAO010000181.1 Protein Homology CDS 2203 2832 . - 0 ID=cds-WP_011883309.1;Parent=gene-LDO50_RS16755;Dbxref=GenBank:WP_011883309.1;Name=WP_011883309.1;Ontology_term=GO:0006950,GO:0061024,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=response to stress|0006950||IEA,membrane organization|0061024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883309.1;locus_tag=LDO50_RS16755;product=paraquat-inducible protein A;protein_id=WP_011883309.1;transl_table=11 NZ_CAJZAO010000181.1 RefSeq gene 2829 3518 . - . ID=gene-LDO50_RS16760;Name=LDO50_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16760;old_locus_tag=BVI1335_2610004 NZ_CAJZAO010000181.1 Protein Homology CDS 2829 3518 . - 0 ID=cds-WP_011883310.1;Parent=gene-LDO50_RS16760;Dbxref=GenBank:WP_011883310.1;Name=WP_011883310.1;Ontology_term=GO:0006950,GO:0061024,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=response to stress|0006950||IEA,membrane organization|0061024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327922.1;locus_tag=LDO50_RS16760;product=paraquat-inducible protein A;protein_id=WP_011883310.1;transl_table=11 NZ_CAJZAO010000181.1 RefSeq gene 3777 4337 . + . ID=gene-LDO50_RS16765;Name=LDO50_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16765;old_locus_tag=BVI1335_2610006 NZ_CAJZAO010000181.1 Protein Homology CDS 3777 4337 . + 0 ID=cds-WP_046425605.1;Parent=gene-LDO50_RS16765;Dbxref=GenBank:WP_046425605.1;Name=WP_046425605.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602248.1;locus_tag=LDO50_RS16765;product=cytochrome b;protein_id=WP_046425605.1;transl_table=11 NZ_CAJZAO010000181.1 RefSeq gene 4346 4906 . + . ID=gene-LDO50_RS16770;Name=LDO50_RS16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16770;old_locus_tag=BVI1335_2610007 NZ_CAJZAO010000181.1 Protein Homology CDS 4346 4906 . + 0 ID=cds-WP_011883312.1;Parent=gene-LDO50_RS16770;Dbxref=GenBank:WP_011883312.1;Name=WP_011883312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106308.1;locus_tag=LDO50_RS16770;product=YceI family protein;protein_id=WP_011883312.1;transl_table=11 NZ_CAJZAO010000181.1 RefSeq gene 4989 5567 . + . ID=gene-LDO50_RS16775;Name=LDO50_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16775;old_locus_tag=BVI1335_2610008 NZ_CAJZAO010000181.1 Protein Homology CDS 4989 5567 . + 0 ID=cds-WP_011883313.1;Parent=gene-LDO50_RS16775;Dbxref=GenBank:WP_011883313.1;Name=WP_011883313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025318.1;locus_tag=LDO50_RS16775;product=YceI family protein;protein_id=WP_011883313.1;transl_table=11 NZ_CAJZAO010000181.1 RefSeq gene 5737 7014 . + . ID=gene-LDO50_RS16780;Name=LDO50_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16780;old_locus_tag=BVI1335_2610009 NZ_CAJZAO010000181.1 Protein Homology CDS 5737 7014 . + 0 ID=cds-WP_034194441.1;Parent=gene-LDO50_RS16780;Dbxref=GenBank:WP_034194441.1;Name=WP_034194441.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760287.1;locus_tag=LDO50_RS16780;product=MFS transporter;protein_id=WP_034194441.1;transl_table=11 NZ_CAJZAO010000181.1 RefSeq gene 7022 8590 . - . ID=gene-LDO50_RS16785;Name=LDO50_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16785;old_locus_tag=BVI1335_2610010 NZ_CAJZAO010000181.1 Protein Homology CDS 7022 8590 . - 0 ID=cds-WP_212184527.1;Parent=gene-LDO50_RS16785;Dbxref=GenBank:WP_212184527.1;Name=WP_212184527.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883315.1;locus_tag=LDO50_RS16785;product=S41 family peptidase;protein_id=WP_212184527.1;transl_table=11 NZ_CAJZAO010000181.1 RefSeq gene 8800 9750 . - . ID=gene-LDO50_RS16790;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=LDO50_RS16790;old_locus_tag=BVI1335_2610011 NZ_CAJZAO010000181.1 Protein Homology CDS 8800 9750 . - 0 ID=cds-WP_011883316.1;Parent=gene-LDO50_RS16790;Dbxref=GenBank:WP_011883316.1;Name=WP_011883316.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011852175.1;locus_tag=LDO50_RS16790;product=protein translocase subunit SecF;protein_id=WP_011883316.1;transl_table=11 NZ_CAJZAO010000181.1 RefSeq gene 9769 11790 . - . ID=gene-LDO50_RS16795;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=LDO50_RS16795;old_locus_tag=BVI1335_2610012 NZ_CAJZAO010000181.1 Protein Homology CDS 9769 11790 . - 0 ID=cds-WP_059567285.1;Parent=gene-LDO50_RS16795;Dbxref=GenBank:WP_059567285.1;Name=WP_059567285.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363128.1;locus_tag=LDO50_RS16795;product=protein translocase subunit SecD;protein_id=WP_059567285.1;transl_table=11 NZ_CAJZAO010000181.1 RefSeq gene 11897 12220 . - . ID=gene-LDO50_RS16800;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=LDO50_RS16800;old_locus_tag=BVI1335_2610013 NZ_CAJZAO010000181.1 Protein Homology CDS 11897 12220 . - 0 ID=cds-WP_011883318.1;Parent=gene-LDO50_RS16800;Dbxref=GenBank:WP_011883318.1;Name=WP_011883318.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014190436.1;locus_tag=LDO50_RS16800;product=preprotein translocase subunit YajC;protein_id=WP_011883318.1;transl_table=11 NZ_CAJZAO010000181.1 RefSeq gene 12492 13685 . - . ID=gene-LDO50_RS16805;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=LDO50_RS16805;old_locus_tag=BVI1335_2610016 NZ_CAJZAO010000181.1 Protein Homology CDS 12492 13685 . - 0 ID=cds-WP_034194442.1;Parent=gene-LDO50_RS16805;Dbxref=GenBank:WP_034194442.1;Name=WP_034194442.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363129.1;locus_tag=LDO50_RS16805;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_034194442.1;transl_table=11 NZ_CAJZAO010000181.1 RefSeq gene 13843 14326 . - . ID=gene-LDO50_RS16810;Name=LDO50_RS16810;end_range=14326,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16810;old_locus_tag=BVI1335_2610017;partial=true NZ_CAJZAO010000181.1 Protein Homology CDS 13843 14326 . - 1 ID=cds-WP_224019920.1;Parent=gene-LDO50_RS16810;Dbxref=GenBank:WP_224019920.1;Name=WP_224019920.1;Ontology_term=GO:0016740,GO:0016853;end_range=14326,.;gbkey=CDS;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416744.1;locus_tag=LDO50_RS16810;partial=true;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_224019920.1;transl_table=11 NZ_CAJZAO010000181.1 RefSeq pseudogene 14337 14605 . - . ID=gene-LDO50_RS31640;Name=LDO50_RS31640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31640;old_locus_tag=BVI1335_2610018;partial=true;pseudo=true;start_range=.,14337 NZ_CAJZAO010000181.1 GeneMarkS-2+ CDS 14337 14605 . - 0 ID=cds-LDO50_RS31640;Parent=gene-LDO50_RS31640;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS31640;partial=true;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;pseudo=true;start_range=.,14337;transl_table=11 ##sequence-region NZ_CAJZAO010000182.1 1 2048 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000182.1 RefSeq region 1 2048 . + . ID=NZ_CAJZAO010000182.1:1..2048;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_262 NZ_CAJZAO010000182.1 RefSeq pseudogene 1 180 . + . ID=gene-LDO50_RS31645;Name=LDO50_RS31645;end_range=180,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31645;old_locus_tag=BVI1335_2620001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000182.1 Protein Homology CDS 1 180 . + 1 ID=cds-LDO50_RS31645;Parent=gene-LDO50_RS31645;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=180,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405099.1;locus_tag=LDO50_RS31645;partial=true;product=polyhydroxyalkanoate depolymerase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000182.1 RefSeq pseudogene 191 899 . + . ID=gene-LDO50_RS16815;Name=LDO50_RS16815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS16815;old_locus_tag=BVI1335_2620002;partial=true;pseudo=true;start_range=.,191 NZ_CAJZAO010000182.1 Protein Homology CDS 191 899 . + 1 ID=cds-LDO50_RS16815;Parent=gene-LDO50_RS16815;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722806.1;locus_tag=LDO50_RS16815;partial=true;product=polyhydroxyalkanoate depolymerase;pseudo=true;start_range=.,191;transl_table=11 NZ_CAJZAO010000182.1 RefSeq gene 886 1566 . - . ID=gene-LDO50_RS16820;Name=LDO50_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16820;old_locus_tag=BVI1335_2620003 NZ_CAJZAO010000182.1 Protein Homology CDS 886 1566 . - 0 ID=cds-WP_081060060.1;Parent=gene-LDO50_RS16820;Dbxref=GenBank:WP_081060060.1;Name=WP_081060060.1;Ontology_term=GO:0016772;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722805.1;locus_tag=LDO50_RS16820;product=phosphoribosyltransferase;protein_id=WP_081060060.1;transl_table=11 NZ_CAJZAO010000182.1 RefSeq pseudogene 1894 2048 . - . ID=gene-LDO50_RS31650;Name=LDO50_RS31650;end_range=2048,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31650;partial=true;pseudo=true NZ_CAJZAO010000182.1 Protein Homology CDS 1894 2048 . - 2 ID=cds-LDO50_RS31650;Parent=gene-LDO50_RS31650;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2048,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722804.1;locus_tag=LDO50_RS31650;partial=true;product=phospholipase D-like domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000183.1 1 8062 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000183.1 RefSeq region 1 8062 . + . ID=NZ_CAJZAO010000183.1:1..8062;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_263 NZ_CAJZAO010000183.1 RefSeq pseudogene 1 271 . + . ID=gene-LDO50_RS16825;Name=LDO50_RS16825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS16825;old_locus_tag=BVI1335_2630001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000183.1 Protein Homology CDS 1 271 . + 1 ID=cds-LDO50_RS16825;Parent=gene-LDO50_RS16825;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491398.1;locus_tag=LDO50_RS16825;partial=true;product=manganese catalase family protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000183.1 RefSeq gene 340 858 . + . ID=gene-LDO50_RS16830;Name=LDO50_RS16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16830;old_locus_tag=BVI1335_2630002 NZ_CAJZAO010000183.1 Protein Homology CDS 340 858 . + 0 ID=cds-WP_011882455.1;Parent=gene-LDO50_RS16830;Dbxref=GenBank:WP_011882455.1;Name=WP_011882455.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882455.1;locus_tag=LDO50_RS16830;product=ferritin-like domain-containing protein;protein_id=WP_011882455.1;transl_table=11 NZ_CAJZAO010000183.1 RefSeq gene 877 1155 . - . ID=gene-LDO50_RS16835;Name=LDO50_RS16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16835;old_locus_tag=BVI1335_2630003 NZ_CAJZAO010000183.1 Protein Homology CDS 877 1155 . - 0 ID=cds-WP_045577884.1;Parent=gene-LDO50_RS16835;Dbxref=GenBank:WP_045577884.1;Name=WP_045577884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482419.1;locus_tag=LDO50_RS16835;product=hypothetical protein;protein_id=WP_045577884.1;transl_table=11 NZ_CAJZAO010000183.1 RefSeq gene 1254 2876 . - . ID=gene-LDO50_RS16840;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=LDO50_RS16840;old_locus_tag=BVI1335_2630004 NZ_CAJZAO010000183.1 Protein Homology CDS 1254 2876 . - 0 ID=cds-WP_059895187.1;Parent=gene-LDO50_RS16840;Dbxref=GenBank:WP_059895187.1;Name=WP_059895187.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006047184.1;locus_tag=LDO50_RS16840;product=chaperonin GroEL;protein_id=WP_059895187.1;transl_table=11 NZ_CAJZAO010000183.1 RefSeq gene 2957 3274 . - . ID=gene-LDO50_RS16845;Name=LDO50_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16845;old_locus_tag=BVI1335_2630005 NZ_CAJZAO010000183.1 Protein Homology CDS 2957 3274 . - 0 ID=cds-WP_059696367.1;Parent=gene-LDO50_RS16845;Dbxref=GenBank:WP_059696367.1;Name=WP_059696367.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545774.1;locus_tag=LDO50_RS16845;product=co-chaperone GroES;protein_id=WP_059696367.1;transl_table=11 NZ_CAJZAO010000183.1 RefSeq pseudogene 3440 4089 . - . ID=gene-LDO50_RS16850;Name=LDO50_RS16850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS16850;old_locus_tag=BVI1335_2630007;pseudo=true NZ_CAJZAO010000183.1 Protein Homology CDS 3440 4089 . - 0 ID=cds-LDO50_RS16850;Parent=gene-LDO50_RS16850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404527.1;locus_tag=LDO50_RS16850;product=diguanylate cyclase;pseudo=true;transl_table=11 NZ_CAJZAO010000183.1 RefSeq gene 4291 4620 . + . ID=gene-LDO50_RS16855;Name=LDO50_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16855;old_locus_tag=BVI1335_2630009 NZ_CAJZAO010000183.1 Protein Homology CDS 4291 4620 . + 0 ID=cds-WP_059895185.1;Parent=gene-LDO50_RS16855;Dbxref=GenBank:WP_059895185.1;Name=WP_059895185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498550.1;locus_tag=LDO50_RS16855;product=hypothetical protein;protein_id=WP_059895185.1;transl_table=11 NZ_CAJZAO010000183.1 RefSeq gene 4725 5006 . - . ID=gene-LDO50_RS16860;Name=LDO50_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16860;old_locus_tag=BVI1335_2630010 NZ_CAJZAO010000183.1 Protein Homology CDS 4725 5006 . - 0 ID=cds-WP_041494195.1;Parent=gene-LDO50_RS16860;Dbxref=GenBank:WP_041494195.1;Name=WP_041494195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493391.1;locus_tag=LDO50_RS16860;product=hypothetical protein;protein_id=WP_041494195.1;transl_table=11 NZ_CAJZAO010000183.1 RefSeq gene 5216 5425 . - . ID=gene-LDO50_RS16865;Name=LDO50_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16865;old_locus_tag=BVI1335_2630011 NZ_CAJZAO010000183.1 Protein Homology CDS 5216 5425 . - 0 ID=cds-WP_034195215.1;Parent=gene-LDO50_RS16865;Dbxref=GenBank:WP_034195215.1;Name=WP_034195215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547465.1;locus_tag=LDO50_RS16865;product=hypothetical protein;protein_id=WP_034195215.1;transl_table=11 NZ_CAJZAO010000183.1 RefSeq gene 5811 6665 . + . ID=gene-LDO50_RS16870;Name=LDO50_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16870;old_locus_tag=BVI1335_2630013 NZ_CAJZAO010000183.1 Protein Homology CDS 5811 6665 . + 0 ID=cds-WP_011882463.1;Parent=gene-LDO50_RS16870;Dbxref=GenBank:WP_011882463.1;Name=WP_011882463.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199693.1;locus_tag=LDO50_RS16870;product=helix-turn-helix domain-containing protein;protein_id=WP_011882463.1;transl_table=11 NZ_CAJZAO010000183.1 RefSeq gene 6777 8062 . + . ID=gene-LDO50_RS16875;Name=LDO50_RS16875;end_range=8062,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16875;partial=true NZ_CAJZAO010000183.1 Protein Homology CDS 6777 8062 . + 0 ID=cds-WP_224019921.1;Parent=gene-LDO50_RS16875;Dbxref=GenBank:WP_224019921.1;Name=WP_224019921.1;end_range=8062,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216839.1;locus_tag=LDO50_RS16875;partial=true;product=AAA family ATPase;protein_id=WP_224019921.1;transl_table=11 ##sequence-region NZ_CAJZAO010000184.1 1 14686 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000184.1 RefSeq region 1 14686 . + . ID=NZ_CAJZAO010000184.1:1..14686;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_264 NZ_CAJZAO010000184.1 RefSeq gene 410 880 . + . ID=gene-LDO50_RS31655;Name=LDO50_RS31655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31655;old_locus_tag=BVI1335_2640001 NZ_CAJZAO010000184.1 Protein Homology CDS 410 880 . + 0 ID=cds-WP_443797792.1;Parent=gene-LDO50_RS31655;Dbxref=GenBank:WP_443797792.1;Name=WP_443797792.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: protein motif:HMM:NF014045.6;locus_tag=LDO50_RS31655;product=NYN domain-containing protein;protein_id=WP_443797792.1;transl_table=11 NZ_CAJZAO010000184.1 RefSeq gene 953 2635 . - . ID=gene-LDO50_RS16885;Name=LDO50_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16885;old_locus_tag=BVI1335_2640003 NZ_CAJZAO010000184.1 Protein Homology CDS 953 2635 . - 0 ID=cds-WP_224019923.1;Parent=gene-LDO50_RS16885;Dbxref=GenBank:WP_224019923.1;Name=WP_224019923.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661111.1;locus_tag=LDO50_RS16885;product=sensor histidine kinase;protein_id=WP_224019923.1;transl_table=11 NZ_CAJZAO010000184.1 RefSeq gene 3320 4120 . + . ID=gene-LDO50_RS16890;Name=LDO50_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16890;old_locus_tag=BVI1335_2640005 NZ_CAJZAO010000184.1 Protein Homology CDS 3320 4120 . + 0 ID=cds-WP_045579858.1;Parent=gene-LDO50_RS16890;Dbxref=GenBank:WP_045579858.1;Name=WP_045579858.1;Ontology_term=GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661110.1;locus_tag=LDO50_RS16890;product=EAL domain-containing protein;protein_id=WP_045579858.1;transl_table=11 NZ_CAJZAO010000184.1 RefSeq gene 4189 5181 . - . ID=gene-LDO50_RS16895;Name=LDO50_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16895;old_locus_tag=BVI1335_2640006 NZ_CAJZAO010000184.1 Protein Homology CDS 4189 5181 . - 0 ID=cds-WP_124260139.1;Parent=gene-LDO50_RS16895;Dbxref=GenBank:WP_124260139.1;Name=WP_124260139.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756500.1;locus_tag=LDO50_RS16895;product=beta-ketoacyl-ACP synthase III;protein_id=WP_124260139.1;transl_table=11 NZ_CAJZAO010000184.1 RefSeq gene 5252 5581 . - . ID=gene-LDO50_RS16900;Name=LDO50_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16900;old_locus_tag=BVI1335_2640007 NZ_CAJZAO010000184.1 Protein Homology CDS 5252 5581 . - 0 ID=cds-WP_224019924.1;Parent=gene-LDO50_RS16900;Dbxref=GenBank:WP_224019924.1;Name=WP_224019924.1;Ontology_term=GO:0006633,GO:0009245,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756501.1;locus_tag=LDO50_RS16900;product=acyl carrier protein;protein_id=WP_224019924.1;transl_table=11 NZ_CAJZAO010000184.1 RefSeq gene 5651 9577 . - . ID=gene-LDO50_RS16905;Name=LDO50_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16905;old_locus_tag=BVI1335_2640008 NZ_CAJZAO010000184.1 Protein Homology CDS 5651 9577 . - 0 ID=cds-WP_224019925.1;Parent=gene-LDO50_RS16905;Dbxref=GenBank:WP_224019925.1;Name=WP_224019925.1;Ontology_term=GO:0006633,GO:0030639,GO:0034081;gbkey=CDS;go_component=polyketide synthase complex|0034081||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756502.1;locus_tag=LDO50_RS16905;product=type I polyketide synthase;protein_id=WP_224019925.1;transl_table=11 NZ_CAJZAO010000184.1 RefSeq gene 9580 10857 . - . ID=gene-LDO50_RS16910;Name=ccrA;gbkey=Gene;gene=ccrA;gene_biotype=protein_coding;locus_tag=LDO50_RS16910;old_locus_tag=BVI1335_2640009 NZ_CAJZAO010000184.1 Protein Homology CDS 9580 10857 . - 0 ID=cds-WP_045579862.1;Parent=gene-LDO50_RS16910;Dbxref=GenBank:WP_045579862.1;Name=WP_045579862.1;Ontology_term=GO:0043880;gbkey=CDS;gene=ccrA;go_function=crotonyl-CoA reductase activity|0043880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006051355.1;locus_tag=LDO50_RS16910;product=crotonyl-CoA carboxylase/reductase;protein_id=WP_045579862.1;transl_table=11 NZ_CAJZAO010000184.1 RefSeq gene 10932 11690 . - . ID=gene-LDO50_RS16915;Name=LDO50_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16915;old_locus_tag=BVI1335_2640010 NZ_CAJZAO010000184.1 Protein Homology CDS 10932 11690 . - 0 ID=cds-WP_045579863.1;Parent=gene-LDO50_RS16915;Dbxref=GenBank:WP_045579863.1;Name=WP_045579863.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661093.1;locus_tag=LDO50_RS16915;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_045579863.1;transl_table=11 NZ_CAJZAO010000184.1 RefSeq gene 11907 12989 . + . ID=gene-LDO50_RS16920;Name=LDO50_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16920;old_locus_tag=BVI1335_2640011 NZ_CAJZAO010000184.1 Protein Homology CDS 11907 12989 . + 0 ID=cds-WP_045579864.1;Parent=gene-LDO50_RS16920;Dbxref=GenBank:WP_045579864.1;Name=WP_045579864.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017777635.1;locus_tag=LDO50_RS16920;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_045579864.1;transl_table=11 NZ_CAJZAO010000184.1 RefSeq gene 13052 13522 . + . ID=gene-LDO50_RS16925;Name=LDO50_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16925;old_locus_tag=BVI1335_2640012 NZ_CAJZAO010000184.1 Protein Homology CDS 13052 13522 . + 0 ID=cds-WP_045579865.1;Parent=gene-LDO50_RS16925;Dbxref=GenBank:WP_045579865.1;Name=WP_045579865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756506.1;locus_tag=LDO50_RS16925;product=MaoC family dehydratase;protein_id=WP_045579865.1;transl_table=11 NZ_CAJZAO010000184.1 RefSeq gene 13658 13966 . - . ID=gene-LDO50_RS16930;Name=LDO50_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16930;old_locus_tag=BVI1335_2640013 NZ_CAJZAO010000184.1 Protein Homology CDS 13658 13966 . - 0 ID=cds-WP_011880553.1;Parent=gene-LDO50_RS16930;Dbxref=GenBank:WP_011880553.1;Name=WP_011880553.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880553.1;locus_tag=LDO50_RS16930;product=H-NS histone family protein;protein_id=WP_011880553.1;transl_table=11 NZ_CAJZAO010000184.1 RefSeq pseudogene 14118 14686 . - . ID=gene-LDO50_RS16935;Name=LDO50_RS16935;end_range=14686,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS16935;old_locus_tag=BVI1335_2640014;partial=true;pseudo=true NZ_CAJZAO010000184.1 Protein Homology CDS 14118 14686 . - 2 ID=cds-LDO50_RS16935;Parent=gene-LDO50_RS16935;Note=catalyzes the interconversion of alpha-D-mannose 1-phosphate to alpha-D-mannose 6-phosphate and alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=14686,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897868.1;locus_tag=LDO50_RS16935;partial=true;product=phosphomannomutase/phosphoglucomutase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000185.1 1 2352 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000185.1 RefSeq region 1 2352 . + . ID=NZ_CAJZAO010000185.1:1..2352;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_265 NZ_CAJZAO010000185.1 RefSeq gene 1 208 . + . ID=gene-LDO50_RS16940;Name=LDO50_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16940;partial=true;start_range=.,1 NZ_CAJZAO010000185.1 Protein Homology CDS 1 208 . + 1 ID=cds-WP_224019926.1;Parent=gene-LDO50_RS16940;Dbxref=GenBank:WP_224019926.1;Name=WP_224019926.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363245.1;locus_tag=LDO50_RS16940;partial=true;product=glycosyltransferase family 9 protein;protein_id=WP_224019926.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000185.1 RefSeq gene 261 1145 . + . ID=gene-LDO50_RS16945;Name=LDO50_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16945;old_locus_tag=BVI1335_2650002 NZ_CAJZAO010000185.1 Protein Homology CDS 261 1145 . + 0 ID=cds-WP_011883563.1;Parent=gene-LDO50_RS16945;Dbxref=GenBank:WP_011883563.1;Name=WP_011883563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332912.1;locus_tag=LDO50_RS16945;product=Kdo hydroxylase family protein;protein_id=WP_011883563.1;transl_table=11 NZ_CAJZAO010000185.1 RefSeq gene 1183 2352 . + . ID=gene-LDO50_RS16950;Name=waaA;end_range=2352,.;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=LDO50_RS16950;partial=true NZ_CAJZAO010000185.1 Protein Homology CDS 1183 2352 . + 0 ID=cds-WP_224019927.1;Parent=gene-LDO50_RS16950;Dbxref=GenBank:WP_224019927.1;Name=WP_224019927.1;Ontology_term=GO:0016740;end_range=2352,.;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476705.1;locus_tag=LDO50_RS16950;partial=true;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_224019927.1;transl_table=11 ##sequence-region NZ_CAJZAO010000186.1 1 1081 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000186.1 RefSeq region 1 1081 . + . ID=NZ_CAJZAO010000186.1:1..1081;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_266 NZ_CAJZAO010000186.1 RefSeq gene 1 921 . - . ID=gene-LDO50_RS16955;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=LDO50_RS16955;partial=true;start_range=.,1 NZ_CAJZAO010000186.1 Protein Homology CDS 1 921 . - 0 ID=cds-WP_224019928.1;Parent=gene-LDO50_RS16955;Dbxref=GenBank:WP_224019928.1;Name=WP_224019928.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024310277.1;locus_tag=LDO50_RS16955;partial=true;product=IS21 family transposase;protein_id=WP_224019928.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAO010000187.1 1 7329 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000187.1 RefSeq region 1 7329 . + . ID=NZ_CAJZAO010000187.1:1..7329;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_267 NZ_CAJZAO010000187.1 RefSeq gene 1 2137 . + . ID=gene-LDO50_RS16960;Name=LDO50_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16960;old_locus_tag=BVI1335_2670001;partial=true;start_range=.,1 NZ_CAJZAO010000187.1 Protein Homology CDS 1 2137 . + 1 ID=cds-WP_224019929.1;Parent=gene-LDO50_RS16960;Dbxref=GenBank:WP_224019929.1;Name=WP_224019929.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750788.1;locus_tag=LDO50_RS16960;partial=true;product=TonB-dependent siderophore receptor;protein_id=WP_224019929.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000187.1 RefSeq gene 2197 2811 . + . ID=gene-LDO50_RS16965;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=LDO50_RS16965;old_locus_tag=BVI1335_2670002 NZ_CAJZAO010000187.1 Protein Homology CDS 2197 2811 . + 0 ID=cds-WP_011881438.1;Parent=gene-LDO50_RS16965;Dbxref=GenBank:WP_011881438.1;Name=WP_011881438.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881438.1;locus_tag=LDO50_RS16965;product=nicotinamide riboside transporter PnuC;protein_id=WP_011881438.1;transl_table=11 NZ_CAJZAO010000187.1 RefSeq gene 2835 4043 . + . ID=gene-LDO50_RS16970;Name=LDO50_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16970;old_locus_tag=BVI1335_2670003 NZ_CAJZAO010000187.1 Protein Homology CDS 2835 4043 . + 0 ID=cds-WP_059475032.1;Parent=gene-LDO50_RS16970;Dbxref=GenBank:WP_059475032.1;Name=WP_059475032.1;Ontology_term=GO:0016310,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724522.1;locus_tag=LDO50_RS16970;product=phosphotransferase enzyme family protein;protein_id=WP_059475032.1;transl_table=11 NZ_CAJZAO010000187.1 RefSeq gene 4493 6607 . - . ID=gene-LDO50_RS16975;Name=LDO50_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16975;old_locus_tag=BVI1335_2670004 NZ_CAJZAO010000187.1 Protein Homology CDS 4493 6607 . - 0 ID=cds-WP_059895340.1;Parent=gene-LDO50_RS16975;Dbxref=GenBank:WP_059895340.1;Name=WP_059895340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724523.1;locus_tag=LDO50_RS16975;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_059895340.1;transl_table=11 NZ_CAJZAO010000187.1 RefSeq gene 6639 7329 . - . ID=gene-LDO50_RS16980;Name=LDO50_RS16980;end_range=7329,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16980;old_locus_tag=BVI1335_2670005;partial=true NZ_CAJZAO010000187.1 Protein Homology CDS 6639 7329 . - 1 ID=cds-WP_224019930.1;Parent=gene-LDO50_RS16980;Dbxref=GenBank:WP_224019930.1;Name=WP_224019930.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;end_range=7329,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724524.1;locus_tag=LDO50_RS16980;partial=true;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_224019930.1;transl_table=11 ##sequence-region NZ_CAJZAO010000188.1 1 3691 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000188.1 RefSeq region 1 3691 . + . ID=NZ_CAJZAO010000188.1:1..3691;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_268 NZ_CAJZAO010000188.1 RefSeq gene 62 280 . + . ID=gene-LDO50_RS16985;Name=nifT;gbkey=Gene;gene=nifT;gene_biotype=protein_coding;locus_tag=LDO50_RS16985;old_locus_tag=BVI1335_2680001 NZ_CAJZAO010000188.1 Protein Homology CDS 62 280 . + 0 ID=cds-WP_059454647.1;Parent=gene-LDO50_RS16985;Dbxref=GenBank:WP_059454647.1;Name=WP_059454647.1;Ontology_term=GO:0009399;gbkey=CDS;gene=nifT;go_process=nitrogen fixation|0009399||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007177241.1;locus_tag=LDO50_RS16985;product=putative nitrogen fixation protein NifT;protein_id=WP_059454647.1;transl_table=11 NZ_CAJZAO010000188.1 RefSeq gene 282 560 . + . ID=gene-LDO50_RS16990;Name=LDO50_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16990;old_locus_tag=BVI1335_2680002 NZ_CAJZAO010000188.1 Protein Homology CDS 282 560 . + 0 ID=cds-WP_011880135.1;Parent=gene-LDO50_RS16990;Dbxref=GenBank:WP_011880135.1;Name=WP_011880135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880135.1;locus_tag=LDO50_RS16990;product=hypothetical protein;protein_id=WP_011880135.1;transl_table=11 NZ_CAJZAO010000188.1 RefSeq gene 550 1713 . + . ID=gene-LDO50_RS16995;Name=LDO50_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS16995;old_locus_tag=BVI1335_2680003 NZ_CAJZAO010000188.1 Protein Homology CDS 550 1713 . + 0 ID=cds-WP_046424800.1;Parent=gene-LDO50_RS16995;Dbxref=GenBank:WP_046424800.1;Name=WP_046424800.1;Ontology_term=GO:0008483;gbkey=CDS;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018423187.1;locus_tag=LDO50_RS16995;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_046424800.1;transl_table=11 NZ_CAJZAO010000188.1 RefSeq gene 1725 2564 . + . ID=gene-LDO50_RS17000;Name=LDO50_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17000;old_locus_tag=BVI1335_2680004 NZ_CAJZAO010000188.1 Protein Homology CDS 1725 2564 . + 0 ID=cds-WP_224019931.1;Parent=gene-LDO50_RS17000;Dbxref=GenBank:WP_224019931.1;Name=WP_224019931.1;Ontology_term=GO:0008270,GO:0017136,GO:0046872,GO:0070403;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,histone deacetylase activity%2C NAD-dependent|0017136||IEA,metal ion binding|0046872||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880137.1;locus_tag=LDO50_RS17000;product=SIR2 family NAD-dependent protein deacylase;protein_id=WP_224019931.1;transl_table=11 NZ_CAJZAO010000188.1 RefSeq gene 2645 2941 . + . ID=gene-LDO50_RS17005;Name=LDO50_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17005;old_locus_tag=BVI1335_2680005 NZ_CAJZAO010000188.1 Protein Homology CDS 2645 2941 . + 0 ID=cds-WP_011880138.1;Parent=gene-LDO50_RS17005;Dbxref=GenBank:WP_011880138.1;Name=WP_011880138.1;Ontology_term=GO:0009055,GO:0051537;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880138.1;locus_tag=LDO50_RS17005;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_011880138.1;transl_table=11 NZ_CAJZAO010000188.1 RefSeq gene 3056 3292 . - . ID=gene-LDO50_RS17010;Name=LDO50_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17010;old_locus_tag=BVI1335_2680006 NZ_CAJZAO010000188.1 Protein Homology CDS 3056 3292 . - 0 ID=cds-WP_014725861.1;Parent=gene-LDO50_RS17010;Dbxref=GenBank:WP_014725861.1;Name=WP_014725861.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880139.1;locus_tag=LDO50_RS17010;product=FmdB family zinc ribbon protein;protein_id=WP_014725861.1;transl_table=11 NZ_CAJZAO010000188.1 RefSeq pseudogene 3317 3518 . - . ID=gene-LDO50_RS31660;Name=LDO50_RS31660;end_range=3518,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31660;old_locus_tag=BVI1335_2680007;partial=true;pseudo=true NZ_CAJZAO010000188.1 Protein Homology CDS 3317 3518 . - 1 ID=cds-LDO50_RS31660;Parent=gene-LDO50_RS31660;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3518,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880140.1;locus_tag=LDO50_RS31660;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CAJZAO010000188.1 RefSeq pseudogene 3529 3691 . - . ID=gene-LDO50_RS31665;Name=LDO50_RS31665;end_range=3691,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31665;old_locus_tag=BVI1335_2680008;partial=true;pseudo=true;start_range=.,3529 NZ_CAJZAO010000188.1 Protein Homology CDS 3529 3691 . - 0 ID=cds-LDO50_RS31665;Parent=gene-LDO50_RS31665;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=3691,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880140.1;locus_tag=LDO50_RS31665;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3529;transl_table=11 ##sequence-region NZ_CAJZAO010000189.1 1 2472 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000189.1 RefSeq region 1 2472 . + . ID=NZ_CAJZAO010000189.1:1..2472;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_269 NZ_CAJZAO010000189.1 RefSeq gene 1 1560 . - . ID=gene-LDO50_RS17020;Name=LDO50_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17020;partial=true;start_range=.,1 NZ_CAJZAO010000189.1 Protein Homology CDS 1 1560 . - 0 ID=cds-WP_224019932.1;Parent=gene-LDO50_RS17020;Dbxref=GenBank:WP_224019932.1;Name=WP_224019932.1;Ontology_term=GO:0015990,GO:0004129,GO:0020037,GO:0046872;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493757.1;locus_tag=LDO50_RS17020;partial=true;product=cytochrome c oxidase subunit I;protein_id=WP_224019932.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000189.1 RefSeq gene 1574 2472 . - . ID=gene-LDO50_RS17025;Name=coxB;end_range=2472,.;gbkey=Gene;gene=coxB;gene_biotype=protein_coding;locus_tag=LDO50_RS17025;old_locus_tag=BVI1335_2690002;partial=true NZ_CAJZAO010000189.1 Protein Homology CDS 1574 2472 . - 2 ID=cds-WP_224019933.1;Parent=gene-LDO50_RS17025;Dbxref=GenBank:WP_224019933.1;Name=WP_224019933.1;Ontology_term=GO:0004129,GO:0016020;end_range=2472,.;gbkey=CDS;gene=coxB;go_component=membrane|0016020||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498275.1;locus_tag=LDO50_RS17025;partial=true;product=cytochrome c oxidase subunit II;protein_id=WP_224019933.1;transl_table=11 ##sequence-region NZ_CAJZAO010000190.1 1 106854 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000190.1 RefSeq region 1 106854 . + . ID=NZ_CAJZAO010000190.1:1..106854;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_27 NZ_CAJZAO010000190.1 RefSeq pseudogene 342 639 . - . ID=gene-LDO50_RS17030;Name=LDO50_RS17030;end_range=639,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS17030;partial=true;pseudo=true;start_range=.,342 NZ_CAJZAO010000190.1 Protein Homology CDS 342 639 . - 0 ID=cds-LDO50_RS17030;Parent=gene-LDO50_RS17030;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=639,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397481.1;locus_tag=LDO50_RS17030;partial=true;product=endopolygalacturonase;pseudo=true;start_range=.,342;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 1092 2648 . + . ID=gene-LDO50_RS17035;Name=LDO50_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17035;old_locus_tag=BVI1335_270002 NZ_CAJZAO010000190.1 Protein Homology CDS 1092 2648 . + 0 ID=cds-WP_224019951.1;Parent=gene-LDO50_RS17035;Dbxref=GenBank:WP_224019951.1;Name=WP_224019951.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724705.1;locus_tag=LDO50_RS17035;product=methyl-accepting chemotaxis protein;protein_id=WP_224019951.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 3168 4157 . - . ID=gene-LDO50_RS17040;Name=LDO50_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17040;old_locus_tag=BVI1335_270003 NZ_CAJZAO010000190.1 Protein Homology CDS 3168 4157 . - 0 ID=cds-WP_034194994.1;Parent=gene-LDO50_RS17040;Dbxref=GenBank:WP_034194994.1;Name=WP_034194994.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525229.1;locus_tag=LDO50_RS17040;product=patatin-like phospholipase family protein;protein_id=WP_034194994.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 4296 4736 . - . ID=gene-LDO50_RS17045;Name=LDO50_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17045;old_locus_tag=BVI1335_270004 NZ_CAJZAO010000190.1 Protein Homology CDS 4296 4736 . - 0 ID=cds-WP_041494097.1;Parent=gene-LDO50_RS17045;Dbxref=GenBank:WP_041494097.1;Name=WP_041494097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881682.1;locus_tag=LDO50_RS17045;product=hypothetical protein;protein_id=WP_041494097.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 4759 5043 . + . ID=gene-LDO50_RS17050;Name=LDO50_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17050 NZ_CAJZAO010000190.1 GeneMarkS-2+ CDS 4759 5043 . + 0 ID=cds-WP_043292103.1;Parent=gene-LDO50_RS17050;Dbxref=GenBank:WP_043292103.1;Name=WP_043292103.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS17050;product=hypothetical protein;protein_id=WP_043292103.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 5309 6979 . - . ID=gene-LDO50_RS17055;Name=LDO50_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17055;old_locus_tag=BVI1335_270005 NZ_CAJZAO010000190.1 Protein Homology CDS 5309 6979 . - 0 ID=cds-WP_308117529.1;Parent=gene-LDO50_RS17055;Dbxref=GenBank:WP_308117529.1;Name=WP_308117529.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019976.6;locus_tag=LDO50_RS17055;product=nuclease-related domain-containing protein;protein_id=WP_308117529.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 6884 8434 . + . ID=gene-LDO50_RS17060;Name=LDO50_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17060;old_locus_tag=BVI1335_270006 NZ_CAJZAO010000190.1 Protein Homology CDS 6884 8434 . + 0 ID=cds-WP_011881684.1;Parent=gene-LDO50_RS17060;Dbxref=GenBank:WP_011881684.1;Name=WP_011881684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365645.1;locus_tag=LDO50_RS17060;product=phospholipase D family protein;protein_id=WP_011881684.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 8531 11017 . - . ID=gene-LDO50_RS17065;Name=LDO50_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17065;old_locus_tag=BVI1335_270008 NZ_CAJZAO010000190.1 Protein Homology CDS 8531 11017 . - 0 ID=cds-WP_212167267.1;Parent=gene-LDO50_RS17065;Dbxref=GenBank:WP_212167267.1;Name=WP_212167267.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881685.1;locus_tag=LDO50_RS17065;product=mechanosensitive ion channel family protein;protein_id=WP_212167267.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 11281 12240 . - . ID=gene-LDO50_RS17070;Name=LDO50_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17070;old_locus_tag=BVI1335_270009 NZ_CAJZAO010000190.1 Protein Homology CDS 11281 12240 . - 0 ID=cds-WP_224019935.1;Parent=gene-LDO50_RS17070;Dbxref=GenBank:WP_224019935.1;Name=WP_224019935.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724710.1;locus_tag=LDO50_RS17070;product=TIGR03571 family LLM class oxidoreductase;protein_id=WP_224019935.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 13332 14252 . + . ID=gene-LDO50_RS17075;Name=LDO50_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17075;old_locus_tag=BVI1335_270011 NZ_CAJZAO010000190.1 Protein Homology CDS 13332 14252 . + 0 ID=cds-WP_045578173.1;Parent=gene-LDO50_RS17075;Dbxref=GenBank:WP_045578173.1;Name=WP_045578173.1;Ontology_term=GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658326.1;locus_tag=LDO50_RS17075;product=NAD-dependent protein deacetylase;protein_id=WP_045578173.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 14249 14890 . + . ID=gene-LDO50_RS17080;Name=LDO50_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17080;old_locus_tag=BVI1335_270012 NZ_CAJZAO010000190.1 Protein Homology CDS 14249 14890 . + 0 ID=cds-WP_059695968.1;Parent=gene-LDO50_RS17080;Dbxref=GenBank:WP_059695968.1;Name=WP_059695968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881689.1;locus_tag=LDO50_RS17080;product=DUF938 domain-containing protein;protein_id=WP_059695968.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 14988 16400 . + . ID=gene-LDO50_RS17085;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=LDO50_RS17085;old_locus_tag=BVI1335_270013 NZ_CAJZAO010000190.1 Protein Homology CDS 14988 16400 . + 0 ID=cds-WP_011881690.1;Parent=gene-LDO50_RS17085;Dbxref=GenBank:WP_011881690.1;Name=WP_011881690.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899993.1;locus_tag=LDO50_RS17085;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_011881690.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 16600 16941 . + . ID=gene-LDO50_RS17090;Name=LDO50_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17090;old_locus_tag=BVI1335_270014 NZ_CAJZAO010000190.1 Protein Homology CDS 16600 16941 . + 0 ID=cds-WP_011881691.1;Parent=gene-LDO50_RS17090;Dbxref=GenBank:WP_011881691.1;Name=WP_011881691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399511.1;locus_tag=LDO50_RS17090;product=DUF4148 domain-containing protein;protein_id=WP_011881691.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 17316 18050 . + . ID=gene-LDO50_RS17095;Name=LDO50_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17095;old_locus_tag=BVI1335_270016 NZ_CAJZAO010000190.1 Protein Homology CDS 17316 18050 . + 0 ID=cds-WP_014724713.1;Parent=gene-LDO50_RS17095;Dbxref=GenBank:WP_014724713.1;Name=WP_014724713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495975.1;locus_tag=LDO50_RS17095;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_014724713.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 18100 18738 . - . ID=gene-LDO50_RS17100;Name=LDO50_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17100;old_locus_tag=BVI1335_270017 NZ_CAJZAO010000190.1 Protein Homology CDS 18100 18738 . - 0 ID=cds-WP_034195059.1;Parent=gene-LDO50_RS17100;Dbxref=GenBank:WP_034195059.1;Name=WP_034195059.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404060.1;locus_tag=LDO50_RS17100;product=Pr6Pr family membrane protein;protein_id=WP_034195059.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 18978 19514 . + . ID=gene-LDO50_RS17105;Name=LDO50_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17105;old_locus_tag=BVI1335_270018 NZ_CAJZAO010000190.1 Protein Homology CDS 18978 19514 . + 0 ID=cds-WP_224019936.1;Parent=gene-LDO50_RS17105;Dbxref=GenBank:WP_224019936.1;Name=WP_224019936.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483770.1;locus_tag=LDO50_RS17105;product=cytochrome b;protein_id=WP_224019936.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 19671 20039 . + . ID=gene-LDO50_RS17110;Name=LDO50_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17110;old_locus_tag=BVI1335_270019 NZ_CAJZAO010000190.1 Protein Homology CDS 19671 20039 . + 0 ID=cds-WP_011881695.1;Parent=gene-LDO50_RS17110;Dbxref=GenBank:WP_011881695.1;Name=WP_011881695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548121.1;locus_tag=LDO50_RS17110;product=DUF2946 domain-containing protein;protein_id=WP_011881695.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 20121 22250 . + . ID=gene-LDO50_RS17115;Name=LDO50_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17115;old_locus_tag=BVI1335_270020 NZ_CAJZAO010000190.1 Protein Homology CDS 20121 22250 . + 0 ID=cds-WP_224019937.1;Parent=gene-LDO50_RS17115;Dbxref=GenBank:WP_224019937.1;Name=WP_224019937.1;Ontology_term=GO:0006825,GO:0005375,GO:0005507,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=copper ion transmembrane transporter activity|0005375||IEA,copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548120.1;locus_tag=LDO50_RS17115;product=TonB-dependent copper receptor;protein_id=WP_224019937.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 22478 23572 . + . ID=gene-LDO50_RS17120;Name=LDO50_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17120;old_locus_tag=BVI1335_270022 NZ_CAJZAO010000190.1 Protein Homology CDS 22478 23572 . + 0 ID=cds-WP_224019938.1;Parent=gene-LDO50_RS17120;Dbxref=GenBank:WP_224019938.1;Name=WP_224019938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754864.1;locus_tag=LDO50_RS17120;product=triacylglycerol lipase;protein_id=WP_224019938.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 23810 24904 . + . ID=gene-LDO50_RS17125;Name=LDO50_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17125;old_locus_tag=BVI1335_270023 NZ_CAJZAO010000190.1 Protein Homology CDS 23810 24904 . + 0 ID=cds-WP_011881698.1;Parent=gene-LDO50_RS17125;Dbxref=GenBank:WP_011881698.1;Name=WP_011881698.1;Ontology_term=GO:0016042,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754864.1;locus_tag=LDO50_RS17125;product=esterase/lipase family protein;protein_id=WP_011881698.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 24908 25942 . + . ID=gene-LDO50_RS17130;Name=LDO50_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17130;old_locus_tag=BVI1335_270024 NZ_CAJZAO010000190.1 Protein Homology CDS 24908 25942 . + 0 ID=cds-WP_011881699.1;Parent=gene-LDO50_RS17130;Dbxref=GenBank:WP_011881699.1;Name=WP_011881699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881699.1;locus_tag=LDO50_RS17130;product=lipase secretion chaperone;protein_id=WP_011881699.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 25979 27502 . - . ID=gene-LDO50_RS17135;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=LDO50_RS17135;old_locus_tag=BVI1335_270025 NZ_CAJZAO010000190.1 Protein Homology CDS 25979 27502 . - 0 ID=cds-WP_034195007.1;Parent=gene-LDO50_RS17135;Dbxref=GenBank:WP_034195007.1;Name=WP_034195007.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495971.1;locus_tag=LDO50_RS17135;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_034195007.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 27611 28702 . + . ID=gene-LDO50_RS17140;Name=LDO50_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17140;old_locus_tag=BVI1335_270026 NZ_CAJZAO010000190.1 Protein Homology CDS 27611 28702 . + 0 ID=cds-WP_011881701.1;Parent=gene-LDO50_RS17140;Dbxref=GenBank:WP_011881701.1;Name=WP_011881701.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479371.1;locus_tag=LDO50_RS17140;product=ABC transporter ATP-binding protein;protein_id=WP_011881701.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 28777 29823 . + . ID=gene-LDO50_RS17145;Name=LDO50_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17145;old_locus_tag=BVI1335_270027 NZ_CAJZAO010000190.1 Protein Homology CDS 28777 29823 . + 0 ID=cds-WP_011881702.1;Parent=gene-LDO50_RS17145;Dbxref=GenBank:WP_011881702.1;Name=WP_011881702.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753702.1;locus_tag=LDO50_RS17145;product=ABC transporter substrate-binding protein;protein_id=WP_011881702.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 29926 31182 . + . ID=gene-LDO50_RS17150;Name=LDO50_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17150;old_locus_tag=BVI1335_270028 NZ_CAJZAO010000190.1 Protein Homology CDS 29926 31182 . + 0 ID=cds-WP_011881703.1;Parent=gene-LDO50_RS17150;Dbxref=GenBank:WP_011881703.1;Name=WP_011881703.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196172.1;locus_tag=LDO50_RS17150;product=ABC transporter permease;protein_id=WP_011881703.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 31217 32053 . + . ID=gene-LDO50_RS17155;Name=LDO50_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17155;old_locus_tag=BVI1335_270029 NZ_CAJZAO010000190.1 Protein Homology CDS 31217 32053 . + 0 ID=cds-WP_011881704.1;Parent=gene-LDO50_RS17155;Dbxref=GenBank:WP_011881704.1;Name=WP_011881704.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217864.1;locus_tag=LDO50_RS17155;product=ABC transporter permease;protein_id=WP_011881704.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 32114 33853 . - . ID=gene-LDO50_RS17160;Name=LDO50_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17160;old_locus_tag=BVI1335_270030 NZ_CAJZAO010000190.1 Protein Homology CDS 32114 33853 . - 0 ID=cds-WP_059463442.1;Parent=gene-LDO50_RS17160;Dbxref=GenBank:WP_059463442.1;Name=WP_059463442.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399530.1;locus_tag=LDO50_RS17160;product=S53 family peptidase;protein_id=WP_059463442.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 34556 34879 . + . ID=gene-LDO50_RS17165;Name=LDO50_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17165;old_locus_tag=BVI1335_270031 NZ_CAJZAO010000190.1 Protein Homology CDS 34556 34879 . + 0 ID=cds-WP_011881707.1;Parent=gene-LDO50_RS17165;Dbxref=GenBank:WP_011881707.1;Name=WP_011881707.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899976.1;locus_tag=LDO50_RS17165;product=ArsR/SmtB family transcription factor;protein_id=WP_011881707.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 34876 35307 . + . ID=gene-LDO50_RS17170;Name=LDO50_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17170;old_locus_tag=BVI1335_270032 NZ_CAJZAO010000190.1 Protein Homology CDS 34876 35307 . + 0 ID=cds-WP_034195010.1;Parent=gene-LDO50_RS17170;Dbxref=GenBank:WP_034195010.1;Name=WP_034195010.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724724.1;locus_tag=LDO50_RS17170;product=SRPBCC family protein;protein_id=WP_034195010.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 35304 35744 . + . ID=gene-LDO50_RS17175;Name=LDO50_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17175;old_locus_tag=BVI1335_270033 NZ_CAJZAO010000190.1 Protein Homology CDS 35304 35744 . + 0 ID=cds-WP_011881709.1;Parent=gene-LDO50_RS17175;Dbxref=GenBank:WP_011881709.1;Name=WP_011881709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479363.1;locus_tag=LDO50_RS17175;product=DUF1801 domain-containing protein;protein_id=WP_011881709.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 35865 38582 . - . ID=gene-LDO50_RS17180;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=LDO50_RS17180;old_locus_tag=BVI1335_270034 NZ_CAJZAO010000190.1 Protein Homology CDS 35865 38582 . - 0 ID=cds-WP_011881710.1;Parent=gene-LDO50_RS17180;Dbxref=GenBank:WP_011881710.1;Name=WP_011881710.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012428654.1;locus_tag=LDO50_RS17180;product=aconitate hydratase AcnA;protein_id=WP_011881710.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 38635 40086 . - . ID=gene-LDO50_RS17185;Name=LDO50_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17185;old_locus_tag=BVI1335_270035 NZ_CAJZAO010000190.1 Protein Homology CDS 38635 40086 . - 0 ID=cds-WP_014724725.1;Parent=gene-LDO50_RS17185;Dbxref=GenBank:WP_014724725.1;Name=WP_014724725.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487726.1;locus_tag=LDO50_RS17185;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WP_014724725.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 40104 40613 . - . ID=gene-LDO50_RS17190;Name=LDO50_RS17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17190;old_locus_tag=BVI1335_270036 NZ_CAJZAO010000190.1 Protein Homology CDS 40104 40613 . - 0 ID=cds-WP_011881712.1;Parent=gene-LDO50_RS17190;Dbxref=GenBank:WP_011881712.1;Name=WP_011881712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724726.1;locus_tag=LDO50_RS17190;product=hypothetical protein;protein_id=WP_011881712.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 40844 41848 . - . ID=gene-LDO50_RS17195;Name=LDO50_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17195;old_locus_tag=BVI1335_270038 NZ_CAJZAO010000190.1 Protein Homology CDS 40844 41848 . - 0 ID=cds-WP_034195012.1;Parent=gene-LDO50_RS17195;Dbxref=GenBank:WP_034195012.1;Name=WP_034195012.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881713.1;locus_tag=LDO50_RS17195;product=HpcH/HpaI aldolase/citrate lyase family protein;protein_id=WP_034195012.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 42032 43018 . - . ID=gene-LDO50_RS17200;Name=LDO50_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17200;old_locus_tag=BVI1335_270039 NZ_CAJZAO010000190.1 Protein Homology CDS 42032 43018 . - 0 ID=cds-WP_011881714.1;Parent=gene-LDO50_RS17200;Dbxref=GenBank:WP_011881714.1;Name=WP_011881714.1;Ontology_term=GO:0006108,GO:0016615;gbkey=CDS;go_function=malate dehydrogenase activity|0016615||IEA;go_process=malate metabolic process|0006108||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754984.1;locus_tag=LDO50_RS17200;product=malate dehydrogenase;protein_id=WP_011881714.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 43317 44129 . + . ID=gene-LDO50_RS17205;Name=LDO50_RS17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17205;old_locus_tag=BVI1335_270041 NZ_CAJZAO010000190.1 Protein Homology CDS 43317 44129 . + 0 ID=cds-WP_193043975.1;Parent=gene-LDO50_RS17205;Dbxref=GenBank:WP_193043975.1;Name=WP_193043975.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602596.1;locus_tag=LDO50_RS17205;product=GntR family transcriptional regulator;protein_id=WP_193043975.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 44300 44716 . + . ID=gene-LDO50_RS17210;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;locus_tag=LDO50_RS17210;old_locus_tag=BVI1335_270043 NZ_CAJZAO010000190.1 Protein Homology CDS 44300 44716 . + 0 ID=cds-WP_176043514.1;Parent=gene-LDO50_RS17210;Dbxref=GenBank:WP_176043514.1;Name=WP_176043514.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0045273;gbkey=CDS;gene=sdhC;go_component=respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009895818.1;locus_tag=LDO50_RS17210;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=WP_176043514.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 44721 45089 . + . ID=gene-LDO50_RS17215;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=LDO50_RS17215;old_locus_tag=BVI1335_270044 NZ_CAJZAO010000190.1 Protein Homology CDS 44721 45089 . + 0 ID=cds-WP_006399546.1;Parent=gene-LDO50_RS17215;Dbxref=GenBank:WP_006399546.1;Name=WP_006399546.1;Ontology_term=GO:0006099,GO:0000104,GO:0020037,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhD;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,heme binding|0020037||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018439830.1;locus_tag=LDO50_RS17215;product=succinate dehydrogenase%2C hydrophobic membrane anchor protein;protein_id=WP_006399546.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 45093 46868 . + . ID=gene-LDO50_RS17220;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=LDO50_RS17220;old_locus_tag=BVI1335_270045 NZ_CAJZAO010000190.1 Protein Homology CDS 45093 46868 . + 0 ID=cds-WP_011881717.1;Parent=gene-LDO50_RS17220;Dbxref=GenBank:WP_011881717.1;Name=WP_011881717.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014193768.1;locus_tag=LDO50_RS17220;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_011881717.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 46890 47591 . + . ID=gene-LDO50_RS17225;Name=LDO50_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17225;old_locus_tag=BVI1335_270046 NZ_CAJZAO010000190.1 Protein Homology CDS 46890 47591 . + 0 ID=cds-WP_011881718.1;Parent=gene-LDO50_RS17225;Dbxref=GenBank:WP_011881718.1;Name=WP_011881718.1;Ontology_term=GO:0008177,GO:0046872;gbkey=CDS;go_function=succinate dehydrogenase (quinone) activity|0008177||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733632.1;locus_tag=LDO50_RS17225;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_011881718.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 47599 47871 . + . ID=gene-LDO50_RS17230;Name=LDO50_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17230;old_locus_tag=BVI1335_270047 NZ_CAJZAO010000190.1 Protein Homology CDS 47599 47871 . + 0 ID=cds-WP_011881719.1;Parent=gene-LDO50_RS17230;Dbxref=GenBank:WP_011881719.1;Name=WP_011881719.1;Ontology_term=GO:0006099,GO:0006105,GO:0022900,GO:0034552;gbkey=CDS;go_process=tricarboxylic acid cycle|0006099||IEA,succinate metabolic process|0006105||IEA,electron transport chain|0022900||IEA,respiratory chain complex II assembly|0034552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028609.1;locus_tag=LDO50_RS17230;product=FAD assembly factor SdhE;protein_id=WP_011881719.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 47925 49226 . + . ID=gene-LDO50_RS17235;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=LDO50_RS17235;old_locus_tag=BVI1335_270048 NZ_CAJZAO010000190.1 Protein Homology CDS 47925 49226 . + 0 ID=cds-WP_011881720.1;Parent=gene-LDO50_RS17235;Dbxref=GenBank:WP_011881720.1;Name=WP_011881720.1;Ontology_term=GO:0006099,GO:0036440,GO:0005737;gbkey=CDS;gene=gltA;go_component=cytoplasm|0005737||IEA;go_function=citrate synthase activity|0036440||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188362.1;locus_tag=LDO50_RS17235;product=citrate synthase;protein_id=WP_011881720.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 49317 50318 . - . ID=gene-LDO50_RS17240;Name=LDO50_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17240;old_locus_tag=BVI1335_270049 NZ_CAJZAO010000190.1 Protein Homology CDS 49317 50318 . - 0 ID=cds-WP_224019939.1;Parent=gene-LDO50_RS17240;Dbxref=GenBank:WP_224019939.1;Name=WP_224019939.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355740.1;locus_tag=LDO50_RS17240;product=helix-turn-helix domain-containing protein;protein_id=WP_224019939.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 50390 50779 . + . ID=gene-LDO50_RS17245;Name=LDO50_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17245;old_locus_tag=BVI1335_270050 NZ_CAJZAO010000190.1 Protein Homology CDS 50390 50779 . + 0 ID=cds-WP_034195013.1;Parent=gene-LDO50_RS17245;Dbxref=GenBank:WP_034195013.1;Name=WP_034195013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881722.1;locus_tag=LDO50_RS17245;product=VOC family protein;protein_id=WP_034195013.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 50884 52134 . + . ID=gene-LDO50_RS17250;Name=LDO50_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17250;old_locus_tag=BVI1335_270051 NZ_CAJZAO010000190.1 Protein Homology CDS 50884 52134 . + 0 ID=cds-WP_059458377.1;Parent=gene-LDO50_RS17250;Dbxref=GenBank:WP_059458377.1;Name=WP_059458377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217311.1;locus_tag=LDO50_RS17250;product=DUF1479 domain-containing protein;protein_id=WP_059458377.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 52422 53843 . + . ID=gene-LDO50_RS17255;Name=iaaH;gbkey=Gene;gene=iaaH;gene_biotype=protein_coding;locus_tag=LDO50_RS17255;old_locus_tag=BVI1335_270052 NZ_CAJZAO010000190.1 Protein Homology CDS 52422 53843 . + 0 ID=cds-WP_224019940.1;Parent=gene-LDO50_RS17255;Dbxref=GenBank:WP_224019940.1;Name=WP_224019940.1;gbkey=CDS;gene=iaaH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881724.1;locus_tag=LDO50_RS17255;product=indoleacetamide hydrolase;protein_id=WP_224019940.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 53865 54770 . - . ID=gene-LDO50_RS17260;Name=LDO50_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17260;old_locus_tag=BVI1335_270053 NZ_CAJZAO010000190.1 Protein Homology CDS 53865 54770 . - 0 ID=cds-WP_011881725.1;Parent=gene-LDO50_RS17260;Dbxref=GenBank:WP_011881725.1;Name=WP_011881725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881725.1;locus_tag=LDO50_RS17260;product=LysR family transcriptional regulator;protein_id=WP_011881725.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 54909 56291 . + . ID=gene-LDO50_RS17265;Name=LDO50_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17265;old_locus_tag=BVI1335_270054 NZ_CAJZAO010000190.1 Protein Homology CDS 54909 56291 . + 0 ID=cds-WP_224019941.1;Parent=gene-LDO50_RS17265;Dbxref=GenBank:WP_224019941.1;Name=WP_224019941.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881726.1;locus_tag=LDO50_RS17265;product=MFS transporter;protein_id=WP_224019941.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 56300 56698 . + . ID=gene-LDO50_RS17270;Name=LDO50_RS17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17270;old_locus_tag=BVI1335_270055 NZ_CAJZAO010000190.1 Protein Homology CDS 56300 56698 . + 0 ID=cds-WP_011881727.1;Parent=gene-LDO50_RS17270;Dbxref=GenBank:WP_011881727.1;Name=WP_011881727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881727.1;locus_tag=LDO50_RS17270;product=hypothetical protein;protein_id=WP_011881727.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 56856 58196 . + . ID=gene-LDO50_RS17275;Name=LDO50_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17275;old_locus_tag=BVI1335_270056 NZ_CAJZAO010000190.1 Protein Homology CDS 56856 58196 . + 0 ID=cds-WP_224019942.1;Parent=gene-LDO50_RS17275;Dbxref=GenBank:WP_224019942.1;Name=WP_224019942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881728.1;locus_tag=LDO50_RS17275;product=aromatic ring-hydroxylating dioxygenase subunit alpha;protein_id=WP_224019942.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 58180 58662 . + . ID=gene-LDO50_RS17280;Name=LDO50_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17280;old_locus_tag=BVI1335_270057 NZ_CAJZAO010000190.1 Protein Homology CDS 58180 58662 . + 0 ID=cds-WP_011881729.1;Parent=gene-LDO50_RS17280;Dbxref=GenBank:WP_011881729.1;Name=WP_011881729.1;Ontology_term=GO:0008152,GO:0009056;gbkey=CDS;go_process=metabolic process|0008152||IEA,catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881729.1;locus_tag=LDO50_RS17280;product=aromatic-ring-hydroxylating dioxygenase subunit beta;protein_id=WP_011881729.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 58702 60399 . + . ID=gene-LDO50_RS17285;Name=LDO50_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17285;old_locus_tag=BVI1335_270058 NZ_CAJZAO010000190.1 Protein Homology CDS 58702 60399 . + 0 ID=cds-WP_176321406.1;Parent=gene-LDO50_RS17285;Dbxref=GenBank:WP_176321406.1;Name=WP_176321406.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881730.1;locus_tag=LDO50_RS17285;product=flavin monoamine oxidase family protein;protein_id=WP_176321406.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 60414 61139 . - . ID=gene-LDO50_RS17290;Name=LDO50_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17290;old_locus_tag=BVI1335_270059 NZ_CAJZAO010000190.1 Protein Homology CDS 60414 61139 . - 0 ID=cds-WP_011881731.1;Parent=gene-LDO50_RS17290;Dbxref=GenBank:WP_011881731.1;Name=WP_011881731.1;Ontology_term=GO:0006749,GO:0043295;gbkey=CDS;go_function=glutathione binding|0043295||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404027.1;locus_tag=LDO50_RS17290;product=glutathione S-transferase;protein_id=WP_011881731.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 61873 63282 . + . ID=gene-LDO50_RS17300;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=LDO50_RS17300;old_locus_tag=BVI1335_270061 NZ_CAJZAO010000190.1 Protein Homology CDS 61873 63282 . + 0 ID=cds-WP_224019943.1;Parent=gene-LDO50_RS17300;Dbxref=GenBank:WP_224019943.1;Name=WP_224019943.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690586.1;locus_tag=LDO50_RS17300;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_224019943.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 63286 63432 . + . ID=gene-LDO50_RS17305;Name=LDO50_RS17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17305;old_locus_tag=BVI1335_270062 NZ_CAJZAO010000190.1 Protein Homology CDS 63286 63432 . + 0 ID=cds-WP_011881754.1;Parent=gene-LDO50_RS17305;Dbxref=GenBank:WP_011881754.1;Name=WP_011881754.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487745.1;locus_tag=LDO50_RS17305;product=entericidin A/B family lipoprotein;protein_id=WP_011881754.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 63500 64150 . + . ID=gene-LDO50_RS17310;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=LDO50_RS17310;old_locus_tag=BVI1335_270063 NZ_CAJZAO010000190.1 Protein Homology CDS 63500 64150 . + 0 ID=cds-WP_011881755.1;Parent=gene-LDO50_RS17310;Dbxref=GenBank:WP_011881755.1;Name=WP_011881755.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099619.1;locus_tag=LDO50_RS17310;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_011881755.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 64224 65291 . + . ID=gene-LDO50_RS17315;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=LDO50_RS17315;old_locus_tag=BVI1335_270064 NZ_CAJZAO010000190.1 Protein Homology CDS 64224 65291 . + 0 ID=cds-WP_011881756.1;Parent=gene-LDO50_RS17315;Dbxref=GenBank:WP_011881756.1;Name=WP_011881756.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725192.1;locus_tag=LDO50_RS17315;product=3-isopropylmalate dehydrogenase;protein_id=WP_011881756.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 65422 65541 . + . ID=gene-LDO50_RS17320;Name=LDO50_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17320 NZ_CAJZAO010000190.1 Protein Homology CDS 65422 65541 . + 0 ID=cds-WP_014725191.1;Parent=gene-LDO50_RS17320;Dbxref=GenBank:WP_014725191.1;Name=WP_014725191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329997.1;locus_tag=LDO50_RS17320;product=hypothetical protein;protein_id=WP_014725191.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 65624 66745 . + . ID=gene-LDO50_RS17325;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=LDO50_RS17325;old_locus_tag=BVI1335_270065 NZ_CAJZAO010000190.1 Protein Homology CDS 65624 66745 . + 0 ID=cds-WP_034195019.1;Parent=gene-LDO50_RS17325;Dbxref=GenBank:WP_034195019.1;Name=WP_034195019.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338485.1;locus_tag=LDO50_RS17325;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_034195019.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 66932 68548 . + . ID=gene-LDO50_RS31670;Name=LDO50_RS31670;end_range=68548,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31670;old_locus_tag=BVI1335_270067;partial=true NZ_CAJZAO010000190.1 Protein Homology CDS 66932 68548 . + 0 ID=cds-WP_443797794.1;Parent=gene-LDO50_RS31670;Dbxref=GenBank:WP_443797794.1;Name=WP_443797794.1;Ontology_term=GO:0042834,GO:0005886,GO:0044096;end_range=68548,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA,type IV pilus|0044096||IEA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881758.1;locus_tag=LDO50_RS31670;partial=true;product=type IV pilus assembly protein FimV;protein_id=WP_443797794.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 68559 69290 . + . ID=gene-LDO50_RS31675;Name=LDO50_RS31675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31675;old_locus_tag=BVI1335_270068;partial=true;start_range=.,68559 NZ_CAJZAO010000190.1 Protein Homology CDS 68559 69290 . + 0 ID=cds-WP_443797795.1;Parent=gene-LDO50_RS31675;Dbxref=GenBank:WP_443797795.1;Name=WP_443797795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881758.1;locus_tag=LDO50_RS31675;partial=true;product=FimV/HubP family polar landmark protein;protein_id=WP_443797795.1;start_range=.,68559;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 69290 70102 . + . ID=gene-LDO50_RS17335;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=LDO50_RS17335;old_locus_tag=BVI1335_270069 NZ_CAJZAO010000190.1 Protein Homology CDS 69290 70102 . + 0 ID=cds-WP_034195022.1;Parent=gene-LDO50_RS17335;Dbxref=GenBank:WP_034195022.1;Name=WP_034195022.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399585.1;locus_tag=LDO50_RS17335;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_034195022.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 70099 70797 . + . ID=gene-LDO50_RS17340;Name=LDO50_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17340;old_locus_tag=BVI1335_270070 NZ_CAJZAO010000190.1 Protein Homology CDS 70099 70797 . + 0 ID=cds-WP_041494179.1;Parent=gene-LDO50_RS17340;Dbxref=GenBank:WP_041494179.1;Name=WP_041494179.1;Ontology_term=GO:0000162,GO:0004640;gbkey=CDS;go_function=phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493214.1;locus_tag=LDO50_RS17340;product=phosphoribosylanthranilate isomerase;protein_id=WP_041494179.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 70853 72046 . + . ID=gene-LDO50_RS17345;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=LDO50_RS17345;old_locus_tag=BVI1335_270071 NZ_CAJZAO010000190.1 Protein Homology CDS 70853 72046 . + 0 ID=cds-WP_011881761.1;Parent=gene-LDO50_RS17345;Dbxref=GenBank:WP_011881761.1;Name=WP_011881761.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329990.1;locus_tag=LDO50_RS17345;product=tryptophan synthase subunit beta;protein_id=WP_011881761.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 72054 72926 . + . ID=gene-LDO50_RS17350;Name=LDO50_RS17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17350;old_locus_tag=BVI1335_270072 NZ_CAJZAO010000190.1 Protein Homology CDS 72054 72926 . + 0 ID=cds-WP_224019944.1;Parent=gene-LDO50_RS17350;Dbxref=GenBank:WP_224019944.1;Name=WP_224019944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690577.1;locus_tag=LDO50_RS17350;product=DNA-methyltransferase;protein_id=WP_224019944.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 72968 73786 . + . ID=gene-LDO50_RS17355;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=LDO50_RS17355;old_locus_tag=BVI1335_270073 NZ_CAJZAO010000190.1 Protein Homology CDS 72968 73786 . + 0 ID=cds-WP_011881763.1;Parent=gene-LDO50_RS17355;Dbxref=GenBank:WP_011881763.1;Name=WP_011881763.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881763.1;locus_tag=LDO50_RS17355;product=tryptophan synthase subunit alpha;protein_id=WP_011881763.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 73850 74722 . + . ID=gene-LDO50_RS17360;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=LDO50_RS17360;old_locus_tag=BVI1335_270074 NZ_CAJZAO010000190.1 Protein Homology CDS 73850 74722 . + 0 ID=cds-WP_011881764.1;Parent=gene-LDO50_RS17360;Dbxref=GenBank:WP_011881764.1;Name=WP_011881764.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012403665.1;locus_tag=LDO50_RS17360;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_011881764.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 74823 76133 . + . ID=gene-LDO50_RS17365;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=LDO50_RS17365;old_locus_tag=BVI1335_270075 NZ_CAJZAO010000190.1 Protein Homology CDS 74823 76133 . + 0 ID=cds-WP_014725185.1;Parent=gene-LDO50_RS17365;Dbxref=GenBank:WP_014725185.1;Name=WP_014725185.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089192.1;locus_tag=LDO50_RS17365;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_014725185.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 76163 77017 . + . ID=gene-LDO50_RS17370;Name=LDO50_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17370;old_locus_tag=BVI1335_270076 NZ_CAJZAO010000190.1 Protein Homology CDS 76163 77017 . + 0 ID=cds-WP_224019945.1;Parent=gene-LDO50_RS17370;Dbxref=GenBank:WP_224019945.1;Name=WP_224019945.1;Ontology_term=GO:0042834,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009977970.1;locus_tag=LDO50_RS17370;product=SPOR domain-containing protein;protein_id=WP_224019945.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 77024 77518 . + . ID=gene-LDO50_RS17375;Name=LDO50_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17375;old_locus_tag=BVI1335_270077 NZ_CAJZAO010000190.1 Protein Homology CDS 77024 77518 . + 0 ID=cds-WP_011881767.1;Parent=gene-LDO50_RS17375;Dbxref=GenBank:WP_011881767.1;Name=WP_011881767.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188369.1;locus_tag=LDO50_RS17375;product=CvpA family protein;protein_id=WP_011881767.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 77570 79102 . + . ID=gene-LDO50_RS17380;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=LDO50_RS17380;old_locus_tag=BVI1335_270078 NZ_CAJZAO010000190.1 Protein Homology CDS 77570 79102 . + 0 ID=cds-WP_011881768.1;Parent=gene-LDO50_RS17380;Dbxref=GenBank:WP_011881768.1;Name=WP_011881768.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004544727.1;locus_tag=LDO50_RS17380;product=amidophosphoribosyltransferase;protein_id=WP_011881768.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 79346 80536 . + . ID=gene-LDO50_RS17385;Name=LDO50_RS17385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17385;old_locus_tag=BVI1335_270079 NZ_CAJZAO010000190.1 Protein Homology CDS 79346 80536 . + 0 ID=cds-WP_011881769.1;Parent=gene-LDO50_RS17385;Dbxref=GenBank:WP_011881769.1;Name=WP_011881769.1;Ontology_term=GO:0019346,GO:0071268,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA,homocysteine biosynthetic process|0071268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694679.1;locus_tag=LDO50_RS17385;product=O-succinylhomoserine sulfhydrylase;protein_id=WP_011881769.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 80660 81628 . - . ID=gene-LDO50_RS17390;Name=LDO50_RS17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17390;old_locus_tag=BVI1335_270080 NZ_CAJZAO010000190.1 Protein Homology CDS 80660 81628 . - 0 ID=cds-WP_011881770.1;Parent=gene-LDO50_RS17390;Dbxref=GenBank:WP_011881770.1;Name=WP_011881770.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881770.1;locus_tag=LDO50_RS17390;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_011881770.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 81615 82661 . - . ID=gene-LDO50_RS17395;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=LDO50_RS17395;old_locus_tag=BVI1335_270081 NZ_CAJZAO010000190.1 Protein Homology CDS 81615 82661 . - 0 ID=cds-WP_011881771.1;Parent=gene-LDO50_RS17395;Dbxref=GenBank:WP_011881771.1;Name=WP_011881771.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028634.1;locus_tag=LDO50_RS17395;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_011881771.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 82697 83761 . - . ID=gene-LDO50_RS17400;Name=LDO50_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17400;old_locus_tag=BVI1335_270082 NZ_CAJZAO010000190.1 Protein Homology CDS 82697 83761 . - 0 ID=cds-WP_011881772.1;Parent=gene-LDO50_RS17400;Dbxref=GenBank:WP_011881772.1;Name=WP_011881772.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881772.1;locus_tag=LDO50_RS17400;product=acyltransferase family protein;protein_id=WP_011881772.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 83841 84131 . + . ID=gene-LDO50_RS17405;Name=LDO50_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17405 NZ_CAJZAO010000190.1 GeneMarkS-2+ CDS 83841 84131 . + 0 ID=cds-WP_224019946.1;Parent=gene-LDO50_RS17405;Dbxref=GenBank:WP_224019946.1;Name=WP_224019946.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS17405;product=hypothetical protein;protein_id=WP_224019946.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 84255 86447 . + . ID=gene-LDO50_RS17410;Name=LDO50_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17410;old_locus_tag=BVI1335_270084 NZ_CAJZAO010000190.1 Protein Homology CDS 84255 86447 . + 0 ID=cds-WP_014725182.1;Parent=gene-LDO50_RS17410;Dbxref=GenBank:WP_014725182.1;Name=WP_014725182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467866.1;locus_tag=LDO50_RS17410;product=hypothetical protein;protein_id=WP_014725182.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 86466 87932 . + . ID=gene-LDO50_RS17415;Name=LDO50_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17415;old_locus_tag=BVI1335_270086 NZ_CAJZAO010000190.1 Protein Homology CDS 86466 87932 . + 0 ID=cds-WP_059462361.1;Parent=gene-LDO50_RS17415;Dbxref=GenBank:WP_059462361.1;Name=WP_059462361.1;Ontology_term=GO:0140327,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=flippase activity|0140327||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365703.1;locus_tag=LDO50_RS17415;product=flippase;protein_id=WP_059462361.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 87929 90382 . + . ID=gene-LDO50_RS17420;Name=LDO50_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17420;old_locus_tag=BVI1335_270085 NZ_CAJZAO010000190.1 Protein Homology CDS 87929 90382 . + 0 ID=cds-WP_014725180.1;Parent=gene-LDO50_RS17420;Dbxref=GenBank:WP_014725180.1;Name=WP_014725180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217287.1;locus_tag=LDO50_RS17420;product=glycosyltransferase family 4 protein;protein_id=WP_014725180.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 90987 92162 . - . ID=gene-LDO50_RS17425;Name=LDO50_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17425;old_locus_tag=BVI1335_270087 NZ_CAJZAO010000190.1 Protein Homology CDS 90987 92162 . - 0 ID=cds-WP_059695889.1;Parent=gene-LDO50_RS17425;Dbxref=GenBank:WP_059695889.1;Name=WP_059695889.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404003.1;locus_tag=LDO50_RS17425;product=acyltransferase family protein;protein_id=WP_059695889.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 92377 92520 . + . ID=gene-LDO50_RS17430;Name=LDO50_RS17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17430;old_locus_tag=BVI1335_270088 NZ_CAJZAO010000190.1 Protein Homology CDS 92377 92520 . + 0 ID=cds-WP_011881777.1;Parent=gene-LDO50_RS17430;Dbxref=GenBank:WP_011881777.1;Name=WP_011881777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329973.1;locus_tag=LDO50_RS17430;product=hypothetical protein;protein_id=WP_011881777.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 92748 93635 . + . ID=gene-LDO50_RS17435;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=LDO50_RS17435;old_locus_tag=BVI1335_270089 NZ_CAJZAO010000190.1 Protein Homology CDS 92748 93635 . + 0 ID=cds-WP_011881778.1;Parent=gene-LDO50_RS17435;Dbxref=GenBank:WP_011881778.1;Name=WP_011881778.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881778.1;locus_tag=LDO50_RS17435;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_011881778.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 94404 95522 . - . ID=gene-LDO50_RS17440;Name=LDO50_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17440;old_locus_tag=BVI1335_270090 NZ_CAJZAO010000190.1 Protein Homology CDS 94404 95522 . - 0 ID=cds-WP_059476013.1;Parent=gene-LDO50_RS17440;Dbxref=GenBank:WP_059476013.1;Name=WP_059476013.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365706.1;locus_tag=LDO50_RS17440;product=acyltransferase family protein;protein_id=WP_059476013.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 95803 96252 . + . ID=gene-LDO50_RS17445;Name=LDO50_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17445;old_locus_tag=BVI1335_270091 NZ_CAJZAO010000190.1 Protein Homology CDS 95803 96252 . + 0 ID=cds-WP_011881780.1;Parent=gene-LDO50_RS17445;Dbxref=GenBank:WP_011881780.1;Name=WP_011881780.1;Ontology_term=GO:0030261,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011400993.1;locus_tag=LDO50_RS17445;product=HU family DNA-binding protein;protein_id=WP_011881780.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 96481 96954 . - . ID=gene-LDO50_RS17450;Name=LDO50_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17450;old_locus_tag=BVI1335_270093 NZ_CAJZAO010000190.1 Protein Homology CDS 96481 96954 . - 0 ID=cds-WP_224019947.1;Parent=gene-LDO50_RS17450;Dbxref=GenBank:WP_224019947.1;Name=WP_224019947.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881781.1;locus_tag=LDO50_RS17450;product=VOC family protein;protein_id=WP_224019947.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 97310 98473 . - . ID=gene-LDO50_RS17455;Name=LDO50_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17455;old_locus_tag=BVI1335_270095 NZ_CAJZAO010000190.1 Protein Homology CDS 97310 98473 . - 0 ID=cds-WP_011881782.1;Parent=gene-LDO50_RS17455;Dbxref=GenBank:WP_011881782.1;Name=WP_011881782.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603832.1;locus_tag=LDO50_RS17455;product=porin;protein_id=WP_011881782.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 98476 98850 . + . ID=gene-LDO50_RS17460;Name=LDO50_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17460 NZ_CAJZAO010000190.1 GeneMarkS-2+ CDS 98476 98850 . + 0 ID=cds-WP_224019948.1;Parent=gene-LDO50_RS17460;Dbxref=GenBank:WP_224019948.1;Name=WP_224019948.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS17460;product=hypothetical protein;protein_id=WP_224019948.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 98872 99804 . - . ID=gene-LDO50_RS17465;Name=LDO50_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17465;old_locus_tag=BVI1335_270096 NZ_CAJZAO010000190.1 Protein Homology CDS 98872 99804 . - 0 ID=cds-WP_059476011.1;Parent=gene-LDO50_RS17465;Dbxref=GenBank:WP_059476011.1;Name=WP_059476011.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725173.1;locus_tag=LDO50_RS17465;product=YihY/virulence factor BrkB family protein;protein_id=WP_059476011.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 99957 103028 . + . ID=gene-LDO50_RS17470;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=LDO50_RS17470;old_locus_tag=BVI1335_270098 NZ_CAJZAO010000190.1 Protein Homology CDS 99957 103028 . + 0 ID=cds-WP_155768303.1;Parent=gene-LDO50_RS17470;Dbxref=GenBank:WP_155768303.1;Name=WP_155768303.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004528945.1;locus_tag=LDO50_RS17470;product=formate dehydrogenase-N subunit alpha;protein_id=WP_155768303.1;transl_except=(pos:100545..100547%2Caa:Sec);transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 103039 103953 . + . ID=gene-LDO50_RS17475;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=LDO50_RS17475;old_locus_tag=BVI1335_270099 NZ_CAJZAO010000190.1 Protein Homology CDS 103039 103953 . + 0 ID=cds-WP_011881786.1;Parent=gene-LDO50_RS17475;Dbxref=GenBank:WP_011881786.1;Name=WP_011881786.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019256332.1;locus_tag=LDO50_RS17475;product=formate dehydrogenase subunit beta;protein_id=WP_011881786.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 103950 104576 . + . ID=gene-LDO50_RS17480;Name=LDO50_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17480;old_locus_tag=BVI1335_270100 NZ_CAJZAO010000190.1 Protein Homology CDS 103950 104576 . + 0 ID=cds-WP_011881787.1;Parent=gene-LDO50_RS17480;Dbxref=GenBank:WP_011881787.1;Name=WP_011881787.1;Ontology_term=GO:0009061,GO:0008863,GO:0009055,GO:0009326;gbkey=CDS;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415371.1;locus_tag=LDO50_RS17480;product=formate dehydrogenase subunit gamma;protein_id=WP_011881787.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 104684 105634 . + . ID=gene-LDO50_RS17485;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=LDO50_RS17485;old_locus_tag=BVI1335_270101 NZ_CAJZAO010000190.1 Protein Homology CDS 104684 105634 . + 0 ID=cds-WP_224019949.1;Parent=gene-LDO50_RS17485;Dbxref=GenBank:WP_224019949.1;Name=WP_224019949.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725170.1;locus_tag=LDO50_RS17485;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_224019949.1;transl_table=11 NZ_CAJZAO010000190.1 RefSeq gene 105701 106854 . + . ID=gene-LDO50_RS17490;Name=selA;end_range=106854,.;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=LDO50_RS17490;partial=true NZ_CAJZAO010000190.1 Protein Homology CDS 105701 106854 . + 0 ID=cds-WP_224019950.1;Parent=gene-LDO50_RS17490;Dbxref=GenBank:WP_224019950.1;Name=WP_224019950.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;end_range=106854,.;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899925.1;locus_tag=LDO50_RS17490;partial=true;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_224019950.1;transl_table=11 ##sequence-region NZ_CAJZAO010000191.1 1 491 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000191.1 RefSeq region 1 491 . + . ID=NZ_CAJZAO010000191.1:1..491;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_270 NZ_CAJZAO010000191.1 RefSeq pseudogene 1 155 . - . ID=gene-LDO50_RS31680;Name=LDO50_RS31680;end_range=155,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31680;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000191.1 Protein Homology CDS 1 155 . - 0 ID=cds-LDO50_RS31680;Parent=gene-LDO50_RS31680;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=155,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480968.1;locus_tag=LDO50_RS31680;partial=true;product=ATPase;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAO010000192.1 1 854 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000192.1 RefSeq region 1 854 . + . ID=NZ_CAJZAO010000192.1:1..854;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_271 NZ_CAJZAO010000192.1 RefSeq pseudogene 97 286 . + . ID=gene-LDO50_RS31685;Name=LDO50_RS31685;end_range=286,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31685;old_locus_tag=BVI1335_2710001;partial=true;pseudo=true NZ_CAJZAO010000192.1 Protein Homology CDS 97 286 . + 0 ID=cds-LDO50_RS31685;Parent=gene-LDO50_RS31685;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=286,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544540.1;locus_tag=LDO50_RS31685;partial=true;product=peptidase S10;pseudo=true;transl_table=11 NZ_CAJZAO010000192.1 RefSeq gene 297 641 . + . ID=gene-LDO50_RS31690;Name=LDO50_RS31690;end_range=641,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31690;partial=true;start_range=.,297 NZ_CAJZAO010000192.1 Protein Homology CDS 297 641 . + 0 ID=cds-WP_443797796.1;Parent=gene-LDO50_RS31690;Dbxref=GenBank:WP_443797796.1;Name=WP_443797796.1;Ontology_term=GO:0006508,GO:0004185;end_range=641,.;gbkey=CDS;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601672.1;locus_tag=LDO50_RS31690;partial=true;product=S10 family serine carboxypeptidase-like protein;protein_id=WP_443797796.1;start_range=.,297;transl_table=11 NZ_CAJZAO010000192.1 RefSeq pseudogene 652 854 . + . ID=gene-LDO50_RS31695;Name=LDO50_RS31695;end_range=854,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31695;partial=true;pseudo=true;start_range=.,652 NZ_CAJZAO010000192.1 Protein Homology CDS 652 854 . + 2 ID=cds-LDO50_RS31695;Parent=gene-LDO50_RS31695;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=854,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601672.1;locus_tag=LDO50_RS31695;partial=true;product=peptidase S10;pseudo=true;start_range=.,652;transl_table=11 ##sequence-region NZ_CAJZAO010000193.1 1 3108 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000193.1 RefSeq region 1 3108 . + . ID=NZ_CAJZAO010000193.1:1..3108;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_272 NZ_CAJZAO010000193.1 RefSeq pseudogene 1 168 . - . ID=gene-LDO50_RS31700;Name=LDO50_RS31700;end_range=168,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31700;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000193.1 Protein Homology CDS 1 168 . - 1 ID=cds-LDO50_RS31700;Parent=gene-LDO50_RS31700;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=168,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402355.1;locus_tag=LDO50_RS31700;partial=true;product=LLM class flavin-dependent oxidoreductase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000193.1 RefSeq gene 179 1101 . - . ID=gene-LDO50_RS17510;Name=LDO50_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17510;old_locus_tag=BVI1335_2720002;partial=true;start_range=.,179 NZ_CAJZAO010000193.1 Protein Homology CDS 179 1101 . - 0 ID=cds-WP_443797797.1;Parent=gene-LDO50_RS17510;Dbxref=GenBank:WP_443797797.1;Name=WP_443797797.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402355.1;locus_tag=LDO50_RS17510;partial=true;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_443797797.1;start_range=.,179;transl_table=11 NZ_CAJZAO010000193.1 RefSeq pseudogene 1455 3108 . + . ID=gene-LDO50_RS17515;Name=LDO50_RS17515;end_range=3108,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS17515;partial=true;pseudo=true NZ_CAJZAO010000193.1 Protein Homology CDS 1455 3108 . + 0 ID=cds-LDO50_RS17515;Parent=gene-LDO50_RS17515;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3108,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493822.1;locus_tag=LDO50_RS17515;partial=true;product=LWXIA domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000194.1 1 687 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000194.1 RefSeq region 1 687 . + . ID=NZ_CAJZAO010000194.1:1..687;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_273 NZ_CAJZAO010000194.1 RefSeq gene 1 509 . + . ID=gene-LDO50_RS17520;Name=LDO50_RS17520;end_range=509,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17520;old_locus_tag=BVI1335_2730001;partial=true;start_range=.,1 NZ_CAJZAO010000194.1 Protein Homology CDS 1 509 . + 1 ID=cds-WP_443797798.1;Parent=gene-LDO50_RS17520;Dbxref=GenBank:WP_443797798.1;Name=WP_443797798.1;end_range=509,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882599.1;locus_tag=LDO50_RS17520;partial=true;product=hypothetical protein;protein_id=WP_443797798.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAO010000195.1 1 7937 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000195.1 RefSeq region 1 7937 . + . ID=NZ_CAJZAO010000195.1:1..7937;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_274 NZ_CAJZAO010000195.1 RefSeq gene 1 719 . - . ID=gene-LDO50_RS17525;Name=LDO50_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17525;partial=true;start_range=.,1 NZ_CAJZAO010000195.1 Protein Homology CDS 1 719 . - 0 ID=cds-WP_224019953.1;Parent=gene-LDO50_RS17525;Dbxref=GenBank:WP_224019953.1;Name=WP_224019953.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486076.1;locus_tag=LDO50_RS17525;partial=true;product=ABC transporter ATP-binding protein;protein_id=WP_224019953.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000195.1 RefSeq gene 709 1728 . - . ID=gene-LDO50_RS17530;Name=LDO50_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17530;old_locus_tag=BVI1335_2740002 NZ_CAJZAO010000195.1 Protein Homology CDS 709 1728 . - 0 ID=cds-WP_034193113.1;Parent=gene-LDO50_RS17530;Dbxref=GenBank:WP_034193113.1;Name=WP_034193113.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656819.1;locus_tag=LDO50_RS17530;product=TauD/TfdA family dioxygenase;protein_id=WP_034193113.1;transl_table=11 NZ_CAJZAO010000195.1 RefSeq gene 1772 2014 . - . ID=gene-LDO50_RS17535;Name=LDO50_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17535;old_locus_tag=BVI1335_2740003 NZ_CAJZAO010000195.1 Protein Homology CDS 1772 2014 . - 0 ID=cds-WP_011884790.1;Parent=gene-LDO50_RS17535;Dbxref=GenBank:WP_011884790.1;Name=WP_011884790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363848.1;locus_tag=LDO50_RS17535;product=MbtH family protein;protein_id=WP_011884790.1;transl_table=11 NZ_CAJZAO010000195.1 RefSeq gene 2109 2461 . - . ID=gene-LDO50_RS17540;Name=LDO50_RS17540;end_range=2461,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17540;old_locus_tag=BVI1335_2740004;partial=true NZ_CAJZAO010000195.1 Protein Homology CDS 2109 2461 . - 2 ID=cds-WP_372586103.1;Parent=gene-LDO50_RS17540;Dbxref=GenBank:WP_372586103.1;Name=WP_372586103.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;end_range=2461,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884789.1;locus_tag=LDO50_RS17540;partial=true;product=sigma factor-like helix-turn-helix DNA-binding protein;protein_id=WP_372586103.1;transl_table=11 NZ_CAJZAO010000195.1 RefSeq gene 2674 4140 . - . ID=gene-LDO50_RS17545;Name=LDO50_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17545;old_locus_tag=BVI1335_2740005 NZ_CAJZAO010000195.1 Protein Homology CDS 2674 4140 . - 0 ID=cds-WP_060043860.1;Parent=gene-LDO50_RS17545;Dbxref=GenBank:WP_060043860.1;Name=WP_060043860.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363843.1;locus_tag=LDO50_RS17545;product=efflux transporter outer membrane subunit;protein_id=WP_060043860.1;transl_table=11 NZ_CAJZAO010000195.1 RefSeq gene 4140 7277 . - . ID=gene-LDO50_RS17550;Name=LDO50_RS17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17550;old_locus_tag=BVI1335_2740006 NZ_CAJZAO010000195.1 Protein Homology CDS 4140 7277 . - 0 ID=cds-WP_059462581.1;Parent=gene-LDO50_RS17550;Dbxref=GenBank:WP_059462581.1;Name=WP_059462581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723005.1;locus_tag=LDO50_RS17550;product=multidrug efflux RND transporter permease subunit;protein_id=WP_059462581.1;transl_table=11 NZ_CAJZAO010000195.1 RefSeq gene 7294 7937 . - . ID=gene-LDO50_RS17555;Name=LDO50_RS17555;end_range=7937,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17555;old_locus_tag=BVI1335_2740007;partial=true NZ_CAJZAO010000195.1 Protein Homology CDS 7294 7937 . - 2 ID=cds-WP_224019954.1;Parent=gene-LDO50_RS17555;Dbxref=GenBank:WP_224019954.1;Name=WP_224019954.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;end_range=7937,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897085.1;locus_tag=LDO50_RS17555;partial=true;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_224019954.1;transl_table=11 ##sequence-region NZ_CAJZAO010000196.1 1 1070 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000196.1 RefSeq region 1 1070 . + . ID=NZ_CAJZAO010000196.1:1..1070;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_275 NZ_CAJZAO010000196.1 RefSeq gene 1 164 . - . ID=gene-LDO50_RS17560;Name=LDO50_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17560;partial=true;start_range=.,1 NZ_CAJZAO010000196.1 Protein Homology CDS 1 164 . - 0 ID=cds-WP_224019955.1;Parent=gene-LDO50_RS17560;Dbxref=GenBank:WP_224019955.1;Name=WP_224019955.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881872.1;locus_tag=LDO50_RS17560;partial=true;product=FAD-dependent monooxygenase;protein_id=WP_224019955.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000196.1 RefSeq gene 178 749 . - . ID=gene-LDO50_RS31705;Name=LDO50_RS31705;end_range=749,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31705;old_locus_tag=BVI1335_2750002;partial=true NZ_CAJZAO010000196.1 Protein Homology CDS 178 749 . - 2 ID=cds-WP_443797799.1;Parent=gene-LDO50_RS31705;Dbxref=GenBank:WP_443797799.1;Name=WP_443797799.1;Ontology_term=GO:0006631,GO:0003995,GO:0050660;end_range=749,.;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904408.1;locus_tag=LDO50_RS31705;partial=true;product=acyl-CoA dehydrogenase;protein_id=WP_443797799.1;transl_table=11 NZ_CAJZAO010000196.1 RefSeq pseudogene 760 1070 . - . ID=gene-LDO50_RS31710;Name=LDO50_RS31710;end_range=1070,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31710;old_locus_tag=BVI1335_2750003;partial=true;pseudo=true;start_range=.,760 NZ_CAJZAO010000196.1 Protein Homology CDS 760 1070 . - 1 ID=cds-LDO50_RS31710;Parent=gene-LDO50_RS31710;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1070,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069326.1;locus_tag=LDO50_RS31710;partial=true;product=acyl-CoA dehydrogenase;pseudo=true;start_range=.,760;transl_table=11 ##sequence-region NZ_CAJZAO010000197.1 1 4126 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000197.1 RefSeq region 1 4126 . + . ID=NZ_CAJZAO010000197.1:1..4126;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_276 NZ_CAJZAO010000197.1 RefSeq gene 1 352 . - . ID=gene-LDO50_RS17570;Name=LDO50_RS17570;end_range=352,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17570;partial=true;start_range=.,1 NZ_CAJZAO010000197.1 Protein Homology CDS 1 352 . - 1 ID=cds-WP_443797800.1;Parent=gene-LDO50_RS17570;Dbxref=GenBank:WP_443797800.1;Name=WP_443797800.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;end_range=352,.;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882104.1;locus_tag=LDO50_RS17570;partial=true;product=c-type cytochrome;protein_id=WP_443797800.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000197.1 RefSeq pseudogene 363 540 . - . ID=gene-LDO50_RS31715;Name=LDO50_RS31715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31715;old_locus_tag=BVI1335_2760002;partial=true;pseudo=true;start_range=.,363 NZ_CAJZAO010000197.1 Protein Homology CDS 363 540 . - 0 ID=cds-LDO50_RS31715;Parent=gene-LDO50_RS31715;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329621.1;locus_tag=LDO50_RS31715;partial=true;product=cytochrome c;pseudo=true;start_range=.,363;transl_table=11 NZ_CAJZAO010000197.1 RefSeq gene 555 1228 . - . ID=gene-LDO50_RS17575;Name=LDO50_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17575;partial=true;start_range=.,555 NZ_CAJZAO010000197.1 Protein Homology CDS 555 1228 . - 0 ID=cds-WP_224019957.1;Parent=gene-LDO50_RS17575;Dbxref=GenBank:WP_224019957.1;Name=WP_224019957.1;Ontology_term=GO:0006810,GO:0005215,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488658.1;locus_tag=LDO50_RS17575;partial=true;product=ABC transporter ATP-binding protein;protein_id=WP_224019957.1;start_range=.,555;transl_table=11 NZ_CAJZAO010000197.1 RefSeq gene 1222 2310 . - . ID=gene-LDO50_RS17580;Name=LDO50_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17580;old_locus_tag=BVI1335_2760004 NZ_CAJZAO010000197.1 Protein Homology CDS 1222 2310 . - 0 ID=cds-WP_014724973.1;Parent=gene-LDO50_RS17580;Dbxref=GenBank:WP_014724973.1;Name=WP_014724973.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488659.1;locus_tag=LDO50_RS17580;product=ABC transporter permease;protein_id=WP_014724973.1;transl_table=11 NZ_CAJZAO010000197.1 RefSeq gene 2315 3349 . - . ID=gene-LDO50_RS17585;Name=LDO50_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17585;old_locus_tag=BVI1335_2760005 NZ_CAJZAO010000197.1 Protein Homology CDS 2315 3349 . - 0 ID=cds-WP_011882107.1;Parent=gene-LDO50_RS17585;Dbxref=GenBank:WP_011882107.1;Name=WP_011882107.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365953.1;locus_tag=LDO50_RS17585;product=ABC transporter substrate-binding protein;protein_id=WP_011882107.1;transl_table=11 NZ_CAJZAO010000197.1 RefSeq gene 3387 4126 . - . ID=gene-LDO50_RS17590;Name=LDO50_RS17590;end_range=4126,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17590;old_locus_tag=BVI1335_2760006;partial=true NZ_CAJZAO010000197.1 Protein Homology CDS 3387 4126 . - 2 ID=cds-WP_224019956.1;Parent=gene-LDO50_RS17590;Dbxref=GenBank:WP_224019956.1;Name=WP_224019956.1;end_range=4126,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402356.1;locus_tag=LDO50_RS17590;partial=true;product=class II aldolase/adducin family protein;protein_id=WP_224019956.1;transl_table=11 ##sequence-region NZ_CAJZAO010000198.1 1 8692 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000198.1 RefSeq region 1 8692 . + . ID=NZ_CAJZAO010000198.1:1..8692;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_277 NZ_CAJZAO010000198.1 RefSeq pseudogene 1 374 . + . ID=gene-LDO50_RS17595;Name=LDO50_RS17595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS17595;old_locus_tag=BVI1335_2770001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000198.1 Protein Homology CDS 1 374 . + 2 ID=cds-LDO50_RS17595;Parent=gene-LDO50_RS17595;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885039.1;locus_tag=LDO50_RS17595;partial=true;product=DNA polymerase III subunit delta';pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000198.1 RefSeq gene 453 1232 . + . ID=gene-LDO50_RS17600;Name=LDO50_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17600;old_locus_tag=BVI1335_2770002 NZ_CAJZAO010000198.1 Protein Homology CDS 453 1232 . + 0 ID=cds-WP_034195364.1;Parent=gene-LDO50_RS17600;Dbxref=GenBank:WP_034195364.1;Name=WP_034195364.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485949.1;locus_tag=LDO50_RS17600;product=TatD family hydrolase;protein_id=WP_034195364.1;transl_table=11 NZ_CAJZAO010000198.1 RefSeq gene 1277 1987 . + . ID=gene-LDO50_RS17605;Name=LDO50_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17605;old_locus_tag=BVI1335_2770003 NZ_CAJZAO010000198.1 Protein Homology CDS 1277 1987 . + 0 ID=cds-WP_011885037.1;Parent=gene-LDO50_RS17605;Dbxref=GenBank:WP_011885037.1;Name=WP_011885037.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885037.1;locus_tag=LDO50_RS17605;product=ankyrin repeat domain-containing protein;protein_id=WP_011885037.1;transl_table=11 NZ_CAJZAO010000198.1 RefSeq gene 2070 2426 . + . ID=gene-LDO50_RS17610;Name=LDO50_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17610;old_locus_tag=BVI1335_2770004 NZ_CAJZAO010000198.1 Protein Homology CDS 2070 2426 . + 0 ID=cds-WP_011885036.1;Parent=gene-LDO50_RS17610;Dbxref=GenBank:WP_011885036.1;Name=WP_011885036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402276.1;locus_tag=LDO50_RS17610;product=Rap1a/Tai family immunity protein;protein_id=WP_011885036.1;transl_table=11 NZ_CAJZAO010000198.1 RefSeq gene 2523 3695 . + . ID=gene-LDO50_RS17615;Name=LDO50_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17615;old_locus_tag=BVI1335_2770005 NZ_CAJZAO010000198.1 Protein Homology CDS 2523 3695 . + 0 ID=cds-WP_011885035.1;Parent=gene-LDO50_RS17615;Dbxref=GenBank:WP_011885035.1;Name=WP_011885035.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755342.1;locus_tag=LDO50_RS17615;product=mechanosensitive ion channel family protein;protein_id=WP_011885035.1;transl_table=11 NZ_CAJZAO010000198.1 RefSeq gene 3729 4904 . + . ID=gene-LDO50_RS17620;Name=LDO50_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17620;old_locus_tag=BVI1335_2770006 NZ_CAJZAO010000198.1 Protein Homology CDS 3729 4904 . + 0 ID=cds-WP_059888184.1;Parent=gene-LDO50_RS17620;Dbxref=GenBank:WP_059888184.1;Name=WP_059888184.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026187.1;locus_tag=LDO50_RS17620;product=AAA family ATPase;protein_id=WP_059888184.1;transl_table=11 NZ_CAJZAO010000198.1 RefSeq gene 5116 6180 . + . ID=gene-LDO50_RS17625;Name=LDO50_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17625;old_locus_tag=BVI1335_2770008 NZ_CAJZAO010000198.1 Protein Homology CDS 5116 6180 . + 0 ID=cds-WP_224019958.1;Parent=gene-LDO50_RS17625;Dbxref=GenBank:WP_224019958.1;Name=WP_224019958.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004552799.1;locus_tag=LDO50_RS17625;product=glycosyltransferase family 4 protein;protein_id=WP_224019958.1;transl_table=11 NZ_CAJZAO010000198.1 RefSeq gene 6272 6859 . - . ID=gene-LDO50_RS17630;Name=LDO50_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17630;old_locus_tag=BVI1335_2770009 NZ_CAJZAO010000198.1 Protein Homology CDS 6272 6859 . - 0 ID=cds-WP_011885032.1;Parent=gene-LDO50_RS17630;Dbxref=GenBank:WP_011885032.1;Name=WP_011885032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890687.1;locus_tag=LDO50_RS17630;product=BPSL1445 family SYLF domain-containing lipoprotein;protein_id=WP_011885032.1;transl_table=11 NZ_CAJZAO010000198.1 RefSeq gene 7063 7521 . - . ID=gene-LDO50_RS17635;Name=LDO50_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17635;old_locus_tag=BVI1335_2770011 NZ_CAJZAO010000198.1 Protein Homology CDS 7063 7521 . - 0 ID=cds-WP_011885031.1;Parent=gene-LDO50_RS17635;Dbxref=GenBank:WP_011885031.1;Name=WP_011885031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896843.1;locus_tag=LDO50_RS17635;product=hypothetical protein;protein_id=WP_011885031.1;transl_table=11 NZ_CAJZAO010000198.1 RefSeq gene 7853 8143 . - . ID=gene-LDO50_RS17640;Name=LDO50_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17640;old_locus_tag=BVI1335_2770012 NZ_CAJZAO010000198.1 Protein Homology CDS 7853 8143 . - 0 ID=cds-WP_041493839.1;Parent=gene-LDO50_RS17640;Dbxref=GenBank:WP_041493839.1;Name=WP_041493839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423758.1;locus_tag=LDO50_RS17640;product=PsiF family protein;protein_id=WP_041493839.1;transl_table=11 NZ_CAJZAO010000198.1 RefSeq gene 8418 8692 . + . ID=gene-LDO50_RS17645;Name=LDO50_RS17645;end_range=8692,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17645;partial=true NZ_CAJZAO010000198.1 Protein Homology CDS 8418 8692 . + 0 ID=cds-WP_224019959.1;Parent=gene-LDO50_RS17645;Dbxref=GenBank:WP_224019959.1;Name=WP_224019959.1;end_range=8692,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755059.1;locus_tag=LDO50_RS17645;partial=true;product=asparaginase domain-containing protein;protein_id=WP_224019959.1;transl_table=11 ##sequence-region NZ_CAJZAO010000199.1 1 7174 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000199.1 RefSeq region 1 7174 . + . ID=NZ_CAJZAO010000199.1:1..7174;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_278 NZ_CAJZAO010000199.1 RefSeq pseudogene 1 196 . - . ID=gene-LDO50_RS17650;Name=LDO50_RS17650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS17650;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000199.1 Protein Homology CDS 1 196 . - 0 ID=cds-LDO50_RS17650;Parent=gene-LDO50_RS17650;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657038.1;locus_tag=LDO50_RS17650;partial=true;product=lipoyl synthase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000199.1 RefSeq gene 199 1314 . - . ID=gene-LDO50_RS17655;Name=LDO50_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17655;old_locus_tag=BVI1335_2780002 NZ_CAJZAO010000199.1 Protein Homology CDS 199 1314 . - 0 ID=cds-WP_059456786.1;Parent=gene-LDO50_RS17655;Dbxref=GenBank:WP_059456786.1;Name=WP_059456786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328642.1;locus_tag=LDO50_RS17655;product=acetoin dehydrogenase dihydrolipoyllysine-residue acetyltransferase subunit;protein_id=WP_059456786.1;transl_table=11 NZ_CAJZAO010000199.1 RefSeq gene 1319 2323 . - . ID=gene-LDO50_RS17660;Name=LDO50_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17660;old_locus_tag=BVI1335_2780003 NZ_CAJZAO010000199.1 Protein Homology CDS 1319 2323 . - 0 ID=cds-WP_046426131.1;Parent=gene-LDO50_RS17660;Dbxref=GenBank:WP_046426131.1;Name=WP_046426131.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364013.1;locus_tag=LDO50_RS17660;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_046426131.1;transl_table=11 NZ_CAJZAO010000199.1 RefSeq gene 2385 3368 . - . ID=gene-LDO50_RS17665;Name=LDO50_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17665;old_locus_tag=BVI1335_2780004 NZ_CAJZAO010000199.1 Protein Homology CDS 2385 3368 . - 0 ID=cds-WP_014723114.1;Parent=gene-LDO50_RS17665;Dbxref=GenBank:WP_014723114.1;Name=WP_014723114.1;Ontology_term=GO:0016624,GO:0030976;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C disulfide as acceptor|0016624||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094295.1;locus_tag=LDO50_RS17665;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_014723114.1;transl_table=11 NZ_CAJZAO010000199.1 RefSeq gene 3445 4221 . - . ID=gene-LDO50_RS17670;Name=LDO50_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17670;old_locus_tag=BVI1335_2780005 NZ_CAJZAO010000199.1 Protein Homology CDS 3445 4221 . - 0 ID=cds-WP_011884992.1;Parent=gene-LDO50_RS17670;Dbxref=GenBank:WP_011884992.1;Name=WP_011884992.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213237.1;locus_tag=LDO50_RS17670;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_011884992.1;transl_table=11 NZ_CAJZAO010000199.1 RefSeq gene 4375 5419 . - . ID=gene-LDO50_RS17675;Name=LDO50_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17675;old_locus_tag=BVI1335_2780006;partial=true;start_range=.,4375 NZ_CAJZAO010000199.1 Protein Homology CDS 4375 5419 . - 0 ID=cds-WP_224019960.1;Parent=gene-LDO50_RS17675;Dbxref=GenBank:WP_224019960.1;Name=WP_224019960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657042.1;locus_tag=LDO50_RS17675;partial=true;product=ATP-NAD kinase family protein;protein_id=WP_224019960.1;start_range=.,4375;transl_table=11 NZ_CAJZAO010000199.1 RefSeq gene 5933 7174 . + . ID=gene-LDO50_RS17680;Name=LDO50_RS17680;end_range=7174,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17680;partial=true NZ_CAJZAO010000199.1 Protein Homology CDS 5933 7174 . + 0 ID=cds-WP_224019961.1;Parent=gene-LDO50_RS17680;Dbxref=GenBank:WP_224019961.1;Name=WP_224019961.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;end_range=7174,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492664.1;locus_tag=LDO50_RS17680;partial=true;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_224019961.1;transl_table=11 ##sequence-region NZ_CAJZAO010000200.1 1 845 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000200.1 RefSeq region 1 845 . + . ID=NZ_CAJZAO010000200.1:1..845;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_279 NZ_CAJZAO010000200.1 RefSeq gene 602 763 . + . ID=gene-LDO50_RS17690;Name=LDO50_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17690;old_locus_tag=BVI1335_2790002 NZ_CAJZAO010000200.1 Protein Homology CDS 602 763 . + 0 ID=cds-WP_155121959.1;Parent=gene-LDO50_RS17690;Dbxref=GenBank:WP_155121959.1;Name=WP_155121959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004552326.1;locus_tag=LDO50_RS17690;product=BPSL0761 family protein;protein_id=WP_155121959.1;transl_table=11 ##sequence-region NZ_CAJZAO010000201.1 1 37950 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000201.1 RefSeq region 1 37950 . + . ID=NZ_CAJZAO010000201.1:1..37950;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_28 NZ_CAJZAO010000201.1 RefSeq gene 1 486 . + . ID=gene-LDO50_RS17695;Name=LDO50_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17695;old_locus_tag=BVI1335_280001;partial=true;start_range=.,1 NZ_CAJZAO010000201.1 Protein Homology CDS 1 486 . + 0 ID=cds-WP_224019962.1;Parent=gene-LDO50_RS17695;Dbxref=GenBank:WP_224019962.1;Name=WP_224019962.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723998.1;locus_tag=LDO50_RS17695;partial=true;product=ABC transporter permease;protein_id=WP_224019962.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 483 1439 . + . ID=gene-LDO50_RS17700;Name=LDO50_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17700;old_locus_tag=BVI1335_280002 NZ_CAJZAO010000201.1 Protein Homology CDS 483 1439 . + 0 ID=cds-WP_212169676.1;Parent=gene-LDO50_RS17700;Dbxref=GenBank:WP_212169676.1;Name=WP_212169676.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115358.1;locus_tag=LDO50_RS17700;product=ABC transporter ATP-binding protein;protein_id=WP_212169676.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 1436 2218 . + . ID=gene-LDO50_RS17705;Name=LDO50_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17705;old_locus_tag=BVI1335_280003 NZ_CAJZAO010000201.1 Protein Homology CDS 1436 2218 . + 0 ID=cds-WP_011880806.1;Parent=gene-LDO50_RS17705;Dbxref=GenBank:WP_011880806.1;Name=WP_011880806.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880806.1;locus_tag=LDO50_RS17705;product=ABC transporter permease;protein_id=WP_011880806.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 2424 3107 . + . ID=gene-LDO50_RS17710;Name=LDO50_RS17710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17710;old_locus_tag=BVI1335_280004 NZ_CAJZAO010000201.1 Protein Homology CDS 2424 3107 . + 0 ID=cds-WP_011880807.1;Parent=gene-LDO50_RS17710;Dbxref=GenBank:WP_011880807.1;Name=WP_011880807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480599.1;locus_tag=LDO50_RS17710;product=lytic transglycosylase domain-containing protein;protein_id=WP_011880807.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 3123 3563 . - . ID=gene-LDO50_RS17715;Name=LDO50_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17715;old_locus_tag=BVI1335_280005 NZ_CAJZAO010000201.1 Protein Homology CDS 3123 3563 . - 0 ID=cds-WP_011880808.1;Parent=gene-LDO50_RS17715;Dbxref=GenBank:WP_011880808.1;Name=WP_011880808.1;Ontology_term=GO:0046654,GO:0046656,GO:0004150;gbkey=CDS;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA,folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749884.1;locus_tag=LDO50_RS17715;product=dihydroneopterin aldolase;protein_id=WP_011880808.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 3560 4189 . - . ID=gene-LDO50_RS17720;Name=LDO50_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17720;old_locus_tag=BVI1335_280006 NZ_CAJZAO010000201.1 Protein Homology CDS 3560 4189 . - 0 ID=cds-WP_045577711.1;Parent=gene-LDO50_RS17720;Dbxref=GenBank:WP_045577711.1;Name=WP_045577711.1;Ontology_term=GO:1901053,GO:0008115;gbkey=CDS;go_function=sarcosine oxidase activity|0008115||IEA;go_process=sarcosine catabolic process|1901053||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496827.1;locus_tag=LDO50_RS17720;product=sarcosine oxidase subunit gamma;protein_id=WP_045577711.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 4179 7190 . - . ID=gene-LDO50_RS17725;Name=LDO50_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17725;old_locus_tag=BVI1335_280007 NZ_CAJZAO010000201.1 Protein Homology CDS 4179 7190 . - 0 ID=cds-WP_059568761.1;Parent=gene-LDO50_RS17725;Dbxref=GenBank:WP_059568761.1;Name=WP_059568761.1;Ontology_term=GO:0046653,GO:0008115;gbkey=CDS;go_function=sarcosine oxidase activity|0008115||IEA;go_process=tetrahydrofolate metabolic process|0046653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354097.1;locus_tag=LDO50_RS17725;product=sarcosine oxidase subunit alpha family protein;protein_id=WP_059568761.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 7187 7483 . - . ID=gene-LDO50_RS17730;Name=LDO50_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17730;old_locus_tag=BVI1335_280008 NZ_CAJZAO010000201.1 Protein Homology CDS 7187 7483 . - 0 ID=cds-WP_011880811.1;Parent=gene-LDO50_RS17730;Dbxref=GenBank:WP_011880811.1;Name=WP_011880811.1;Ontology_term=GO:0046653,GO:0008115,GO:0046872;gbkey=CDS;go_function=sarcosine oxidase activity|0008115||IEA,metal ion binding|0046872||IEA;go_process=tetrahydrofolate metabolic process|0046653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547035.1;locus_tag=LDO50_RS17730;product=sarcosine oxidase subunit delta;protein_id=WP_011880811.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 7510 8754 . - . ID=gene-LDO50_RS17735;Name=LDO50_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17735;old_locus_tag=BVI1335_280009 NZ_CAJZAO010000201.1 Protein Homology CDS 7510 8754 . - 0 ID=cds-WP_011880812.1;Parent=gene-LDO50_RS17735;Dbxref=GenBank:WP_011880812.1;Name=WP_011880812.1;Ontology_term=GO:0046653,GO:0008115;gbkey=CDS;go_function=sarcosine oxidase activity|0008115||IEA;go_process=tetrahydrofolate metabolic process|0046653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017773687.1;locus_tag=LDO50_RS17735;product=sarcosine oxidase subunit beta family protein;protein_id=WP_011880812.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 8770 10155 . - . ID=gene-LDO50_RS17740;Name=LDO50_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17740;old_locus_tag=BVI1335_280010 NZ_CAJZAO010000201.1 Protein Homology CDS 8770 10155 . - 0 ID=cds-WP_011880813.1;Parent=gene-LDO50_RS17740;Dbxref=GenBank:WP_011880813.1;Name=WP_011880813.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009981714.1;locus_tag=LDO50_RS17740;product=L-serine ammonia-lyase;protein_id=WP_011880813.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 10397 11476 . + . ID=gene-LDO50_RS17745;Name=LDO50_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17745;old_locus_tag=BVI1335_280011 NZ_CAJZAO010000201.1 Protein Homology CDS 10397 11476 . + 0 ID=cds-WP_011880814.1;Parent=gene-LDO50_RS17745;Dbxref=GenBank:WP_011880814.1;Name=WP_011880814.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489138.1;locus_tag=LDO50_RS17745;product=GlxA family transcriptional regulator;protein_id=WP_011880814.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 11613 12389 . + . ID=gene-LDO50_RS17750;Name=otnI;gbkey=Gene;gene=otnI;gene_biotype=protein_coding;locus_tag=LDO50_RS17750;old_locus_tag=BVI1335_280012 NZ_CAJZAO010000201.1 Protein Homology CDS 11613 12389 . + 0 ID=cds-WP_059562116.1;Parent=gene-LDO50_RS17750;Dbxref=GenBank:WP_059562116.1;Name=WP_059562116.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;gene=otnI;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004549750.1;locus_tag=LDO50_RS17750;product=2-oxo-tetronate isomerase;protein_id=WP_059562116.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 12583 13110 . + . ID=gene-LDO50_RS17755;Name=LDO50_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17755;old_locus_tag=BVI1335_280013 NZ_CAJZAO010000201.1 Protein Homology CDS 12583 13110 . + 0 ID=cds-WP_059462665.1;Parent=gene-LDO50_RS17755;Dbxref=GenBank:WP_059462665.1;Name=WP_059462665.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749899.1;locus_tag=LDO50_RS17755;product=cytochrome b;protein_id=WP_059462665.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 13599 14288 . + . ID=gene-LDO50_RS17760;Name=LDO50_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17760;old_locus_tag=BVI1335_280014 NZ_CAJZAO010000201.1 Protein Homology CDS 13599 14288 . + 0 ID=cds-WP_014724003.1;Parent=gene-LDO50_RS17760;Dbxref=GenBank:WP_014724003.1;Name=WP_014724003.1;Ontology_term=GO:0018193;gbkey=CDS;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603926.1;locus_tag=LDO50_RS17760;product=aspartyl/asparaginyl beta-hydroxylase domain-containing protein;protein_id=WP_014724003.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 14317 15258 . - . ID=gene-LDO50_RS17765;Name=LDO50_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17765;old_locus_tag=BVI1335_280015 NZ_CAJZAO010000201.1 Protein Homology CDS 14317 15258 . - 0 ID=cds-WP_212163638.1;Parent=gene-LDO50_RS17765;Dbxref=GenBank:WP_212163638.1;Name=WP_212163638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659527.1;locus_tag=LDO50_RS17765;product=LysR substrate-binding domain-containing protein;protein_id=WP_212163638.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 15337 15735 . + . ID=gene-LDO50_RS17770;Name=LDO50_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17770;old_locus_tag=BVI1335_280016 NZ_CAJZAO010000201.1 Protein Homology CDS 15337 15735 . + 0 ID=cds-WP_014724005.1;Parent=gene-LDO50_RS17770;Dbxref=GenBank:WP_014724005.1;Name=WP_014724005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757403.1;locus_tag=LDO50_RS17770;product=nuclear transport factor 2 family protein;protein_id=WP_014724005.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 15883 16152 . + . ID=gene-LDO50_RS17775;Name=LDO50_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17775;old_locus_tag=BVI1335_280017 NZ_CAJZAO010000201.1 Protein Homology CDS 15883 16152 . + 0 ID=cds-WP_011880820.1;Parent=gene-LDO50_RS17775;Dbxref=GenBank:WP_011880820.1;Name=WP_011880820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724006.1;locus_tag=LDO50_RS17775;product=MoaD/ThiS family protein;protein_id=WP_011880820.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 16208 17329 . + . ID=gene-LDO50_RS17780;Name=LDO50_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17780;old_locus_tag=BVI1335_280018 NZ_CAJZAO010000201.1 Protein Homology CDS 16208 17329 . + 0 ID=cds-WP_011880821.1;Parent=gene-LDO50_RS17780;Dbxref=GenBank:WP_011880821.1;Name=WP_011880821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480576.1;locus_tag=LDO50_RS17780;product=WD40/YVTN/BNR-like repeat-containing protein;protein_id=WP_011880821.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 17385 18332 . - . ID=gene-LDO50_RS17785;Name=LDO50_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17785;old_locus_tag=BVI1335_280019 NZ_CAJZAO010000201.1 Protein Homology CDS 17385 18332 . - 0 ID=cds-WP_014724007.1;Parent=gene-LDO50_RS17785;Dbxref=GenBank:WP_014724007.1;Name=WP_014724007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354069.1;locus_tag=LDO50_RS17785;product=choline ABC transporter substrate-binding protein;protein_id=WP_014724007.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 18453 19448 . - . ID=gene-LDO50_RS17790;Name=LDO50_RS17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17790;old_locus_tag=BVI1335_280020 NZ_CAJZAO010000201.1 Protein Homology CDS 18453 19448 . - 0 ID=cds-WP_011880823.1;Parent=gene-LDO50_RS17790;Dbxref=GenBank:WP_011880823.1;Name=WP_011880823.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413023.1;locus_tag=LDO50_RS17790;product=GlxA family transcriptional regulator;protein_id=WP_011880823.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 19562 20458 . - . ID=gene-LDO50_RS17795;Name=choW;gbkey=Gene;gene=choW;gene_biotype=protein_coding;locus_tag=LDO50_RS17795;old_locus_tag=BVI1335_280021 NZ_CAJZAO010000201.1 Protein Homology CDS 19562 20458 . - 0 ID=cds-WP_011880824.1;Parent=gene-LDO50_RS17795;Dbxref=GenBank:WP_011880824.1;Name=WP_011880824.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=choW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200833.1;locus_tag=LDO50_RS17795;product=choline ABC transporter permease subunit;protein_id=WP_011880824.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq pseudogene 20451 22124 . - . ID=gene-LDO50_RS17800;Name=LDO50_RS17800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS17800;old_locus_tag=BVI1335_280022;pseudo=true NZ_CAJZAO010000201.1 Protein Homology CDS 20451 22124 . - 0 ID=cds-LDO50_RS17800;Parent=gene-LDO50_RS17800;Note=frameshifted;Ontology_term=GO:0015697,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=quaternary ammonium group transport|0015697||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853386.1;locus_tag=LDO50_RS17800;product=quaternary amine ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 22219 25656 . + . ID=gene-LDO50_RS17805;Name=LDO50_RS17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17805;old_locus_tag=BVI1335_280023 NZ_CAJZAO010000201.1 Protein Homology CDS 22219 25656 . + 0 ID=cds-WP_224019963.1;Parent=gene-LDO50_RS17805;Dbxref=GenBank:WP_224019963.1;Name=WP_224019963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724009.1;locus_tag=LDO50_RS17805;product=DUF2339 domain-containing protein;protein_id=WP_224019963.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 25653 27011 . + . ID=gene-LDO50_RS17810;Name=LDO50_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17810;old_locus_tag=BVI1335_280024 NZ_CAJZAO010000201.1 Protein Homology CDS 25653 27011 . + 0 ID=cds-WP_224019964.1;Parent=gene-LDO50_RS17810;Dbxref=GenBank:WP_224019964.1;Name=WP_224019964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724010.1;locus_tag=LDO50_RS17810;product=DUF3999 domain-containing protein;protein_id=WP_224019964.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 27127 27432 . + . ID=gene-LDO50_RS17815;Name=LDO50_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17815;old_locus_tag=BVI1335_280025 NZ_CAJZAO010000201.1 Protein Homology CDS 27127 27432 . + 0 ID=cds-WP_011880828.1;Parent=gene-LDO50_RS17815;Dbxref=GenBank:WP_011880828.1;Name=WP_011880828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331318.1;locus_tag=LDO50_RS17815;product=NIPSNAP family protein;protein_id=WP_011880828.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 27721 28371 . + . ID=gene-LDO50_RS17820;Name=LDO50_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17820;old_locus_tag=BVI1335_280026 NZ_CAJZAO010000201.1 Protein Homology CDS 27721 28371 . + 0 ID=cds-WP_014724011.1;Parent=gene-LDO50_RS17820;Dbxref=GenBank:WP_014724011.1;Name=WP_014724011.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396284.1;locus_tag=LDO50_RS17820;product=NADPH-dependent FMN reductase;protein_id=WP_014724011.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 28582 28800 . + . ID=gene-LDO50_RS17825;Name=LDO50_RS17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17825;old_locus_tag=BVI1335_280027 NZ_CAJZAO010000201.1 Protein Homology CDS 28582 28800 . + 0 ID=cds-WP_006749916.1;Parent=gene-LDO50_RS17825;Dbxref=GenBank:WP_006749916.1;Name=WP_006749916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898447.1;locus_tag=LDO50_RS17825;product=hypothetical protein;protein_id=WP_006749916.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 28893 29795 . + . ID=gene-LDO50_RS17830;Name=LDO50_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17830;old_locus_tag=BVI1335_280028 NZ_CAJZAO010000201.1 Protein Homology CDS 28893 29795 . + 0 ID=cds-WP_014724012.1;Parent=gene-LDO50_RS17830;Dbxref=GenBank:WP_014724012.1;Name=WP_014724012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009934541.1;locus_tag=LDO50_RS17830;product=hypothetical protein;protein_id=WP_014724012.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 30925 36740 . + . ID=gene-LDO50_RS17835;Name=LDO50_RS17835;end_range=36740,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17835;partial=true NZ_CAJZAO010000201.1 Protein Homology CDS 30925 36740 . + 0 ID=cds-WP_443797801.1;Parent=gene-LDO50_RS17835;Dbxref=GenBank:WP_443797801.1;Name=WP_443797801.1;end_range=36740,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339442.1;locus_tag=LDO50_RS17835;partial=true;product=ESPR-type extended signal peptide-containing protein;protein_id=WP_443797801.1;transl_table=11 NZ_CAJZAO010000201.1 RefSeq gene 36751 37950 . + . ID=gene-LDO50_RS31720;Name=LDO50_RS31720;end_range=37950,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31720;partial=true;start_range=.,36751 NZ_CAJZAO010000201.1 Protein Homology CDS 36751 37950 . + 0 ID=cds-WP_443797802.1;Parent=gene-LDO50_RS31720;Dbxref=GenBank:WP_443797802.1;Name=WP_443797802.1;end_range=37950,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493550.1;locus_tag=LDO50_RS31720;partial=true;product=hypothetical protein;protein_id=WP_443797802.1;start_range=.,36751;transl_table=11 ##sequence-region NZ_CAJZAO010000202.1 1 4406 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000202.1 RefSeq region 1 4406 . + . ID=NZ_CAJZAO010000202.1:1..4406;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_280 NZ_CAJZAO010000202.1 RefSeq pseudogene 1 450 . - . ID=gene-LDO50_RS17840;Name=LDO50_RS17840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS17840;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000202.1 Protein Homology CDS 1 450 . - 0 ID=cds-LDO50_RS17840;Parent=gene-LDO50_RS17840;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405139.1;locus_tag=LDO50_RS17840;partial=true;product=enolase C-terminal domain-like protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000202.1 RefSeq gene 659 2485 . + . ID=gene-LDO50_RS17845;Name=LDO50_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17845;old_locus_tag=BVI1335_2800002 NZ_CAJZAO010000202.1 Protein Homology CDS 659 2485 . + 0 ID=cds-WP_059459610.1;Parent=gene-LDO50_RS17845;Dbxref=GenBank:WP_059459610.1;Name=WP_059459610.1;Ontology_term=GO:0000287,GO:0030976;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372601.1;locus_tag=LDO50_RS17845;product=thiamine pyrophosphate-requiring protein;protein_id=WP_059459610.1;transl_table=11 NZ_CAJZAO010000202.1 RefSeq gene 2524 4406 . - . ID=gene-LDO50_RS17850;Name=LDO50_RS17850;end_range=4406,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17850;old_locus_tag=BVI1335_2800003;partial=true NZ_CAJZAO010000202.1 Protein Homology CDS 2524 4406 . - 2 ID=cds-WP_224019966.1;Parent=gene-LDO50_RS17850;Dbxref=GenBank:WP_224019966.1;Name=WP_224019966.1;end_range=4406,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879972.1;locus_tag=LDO50_RS17850;partial=true;product=glycoside hydrolase family 15 protein;protein_id=WP_224019966.1;transl_table=11 ##sequence-region NZ_CAJZAO010000203.1 1 7750 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000203.1 RefSeq region 1 7750 . + . ID=NZ_CAJZAO010000203.1:1..7750;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_281 NZ_CAJZAO010000203.1 RefSeq gene 1 414 . - . ID=gene-LDO50_RS17855;Name=LDO50_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17855;partial=true;start_range=.,1 NZ_CAJZAO010000203.1 Protein Homology CDS 1 414 . - 0 ID=cds-WP_224019967.1;Parent=gene-LDO50_RS17855;Dbxref=GenBank:WP_224019967.1;Name=WP_224019967.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195885.1;locus_tag=LDO50_RS17855;partial=true;product=SGNH/GDSL hydrolase family protein;protein_id=WP_224019967.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000203.1 RefSeq gene 719 2806 . + . ID=gene-LDO50_RS17860;Name=LDO50_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17860;old_locus_tag=BVI1335_2810002 NZ_CAJZAO010000203.1 Protein Homology CDS 719 2806 . + 0 ID=cds-WP_011882856.1;Parent=gene-LDO50_RS17860;Dbxref=GenBank:WP_011882856.1;Name=WP_011882856.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751043.1;locus_tag=LDO50_RS17860;product=UvrD-helicase domain-containing protein;protein_id=WP_011882856.1;transl_table=11 NZ_CAJZAO010000203.1 RefSeq gene 2921 3820 . - . ID=gene-LDO50_RS17865;Name=LDO50_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17865;old_locus_tag=BVI1335_2810003 NZ_CAJZAO010000203.1 Protein Homology CDS 2921 3820 . - 0 ID=cds-WP_014722208.1;Parent=gene-LDO50_RS17865;Dbxref=GenBank:WP_014722208.1;Name=WP_014722208.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408293.1;locus_tag=LDO50_RS17865;product=c-type cytochrome;protein_id=WP_014722208.1;transl_table=11 NZ_CAJZAO010000203.1 RefSeq gene 4079 4154 . + . ID=gene-LDO50_RS17870;Name=LDO50_RS17870;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS17870;old_locus_tag=BVI1335_TRNA21 NZ_CAJZAO010000203.1 tRNAscan-SE tRNA 4079 4154 . + . ID=rna-LDO50_RS17870;Parent=gene-LDO50_RS17870;anticodon=(pos:4112..4114);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS17870;product=tRNA-Arg NZ_CAJZAO010000203.1 tRNAscan-SE exon 4079 4154 . + . ID=exon-LDO50_RS17870-1;Parent=rna-LDO50_RS17870;anticodon=(pos:4112..4114);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS17870;product=tRNA-Arg NZ_CAJZAO010000203.1 RefSeq gene 4568 4993 . - . ID=gene-LDO50_RS17875;Name=LDO50_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17875;old_locus_tag=BVI1335_2810004 NZ_CAJZAO010000203.1 GeneMarkS-2+ CDS 4568 4993 . - 0 ID=cds-WP_041493721.1;Parent=gene-LDO50_RS17875;Dbxref=GenBank:WP_041493721.1;Name=WP_041493721.1;Ontology_term=GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS17875;product=RICIN domain-containing protein;protein_id=WP_041493721.1;transl_table=11 NZ_CAJZAO010000203.1 RefSeq pseudogene 5293 6035 . + . ID=gene-LDO50_RS17880;Name=LDO50_RS17880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS17880;partial=true;pseudo=true;start_range=.,5293 NZ_CAJZAO010000203.1 Protein Homology CDS 5293 6035 . + 0 ID=cds-LDO50_RS17880;Parent=gene-LDO50_RS17880;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408294.1;locus_tag=LDO50_RS17880;partial=true;product=TIGR04222 domain-containing membrane protein;pseudo=true;start_range=.,5293;transl_table=11 NZ_CAJZAO010000203.1 RefSeq gene 6105 7750 . - . ID=gene-LDO50_RS17885;Name=LDO50_RS17885;end_range=7750,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17885;old_locus_tag=BVI1335_2810009;partial=true NZ_CAJZAO010000203.1 Protein Homology CDS 6105 7750 . - 2 ID=cds-WP_224019968.1;Parent=gene-LDO50_RS17885;Dbxref=GenBank:WP_224019968.1;Name=WP_224019968.1;end_range=7750,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722210.1;locus_tag=LDO50_RS17885;partial=true;product=glycosyltransferase;protein_id=WP_224019968.1;transl_table=11 ##sequence-region NZ_CAJZAO010000204.1 1 9094 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000204.1 RefSeq region 1 9094 . + . ID=NZ_CAJZAO010000204.1:1..9094;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_282 NZ_CAJZAO010000204.1 RefSeq gene 226 1194 . + . ID=gene-LDO50_RS17890;Name=LDO50_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17890;old_locus_tag=BVI1335_2820001 NZ_CAJZAO010000204.1 Protein Homology CDS 226 1194 . + 0 ID=cds-WP_014724805.1;Parent=gene-LDO50_RS17890;Dbxref=GenBank:WP_014724805.1;Name=WP_014724805.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724805.1;locus_tag=LDO50_RS17890;product=helix-turn-helix transcriptional regulator;protein_id=WP_014724805.1;transl_table=11 NZ_CAJZAO010000204.1 RefSeq gene 1323 2021 . + . ID=gene-LDO50_RS17895;Name=LDO50_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17895;old_locus_tag=BVI1335_2820002 NZ_CAJZAO010000204.1 Protein Homology CDS 1323 2021 . + 0 ID=cds-WP_011882330.1;Parent=gene-LDO50_RS17895;Dbxref=GenBank:WP_011882330.1;Name=WP_011882330.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483786.1;locus_tag=LDO50_RS17895;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_011882330.1;transl_table=11 NZ_CAJZAO010000204.1 RefSeq gene 2148 3350 . - . ID=gene-LDO50_RS17900;Name=LDO50_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17900;old_locus_tag=BVI1335_2820003 NZ_CAJZAO010000204.1 Protein Homology CDS 2148 3350 . - 0 ID=cds-WP_059474906.1;Parent=gene-LDO50_RS17900;Dbxref=GenBank:WP_059474906.1;Name=WP_059474906.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724804.1;locus_tag=LDO50_RS17900;product=MFS transporter;protein_id=WP_059474906.1;transl_table=11 NZ_CAJZAO010000204.1 RefSeq gene 3577 5208 . - . ID=gene-LDO50_RS17905;Name=LDO50_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17905;old_locus_tag=BVI1335_2820004 NZ_CAJZAO010000204.1 Protein Homology CDS 3577 5208 . - 0 ID=cds-WP_224019969.1;Parent=gene-LDO50_RS17905;Dbxref=GenBank:WP_224019969.1;Name=WP_224019969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554443.1;locus_tag=LDO50_RS17905;product=trypsin-like peptidase domain-containing protein;protein_id=WP_224019969.1;transl_table=11 NZ_CAJZAO010000204.1 RefSeq gene 5484 6359 . - . ID=gene-LDO50_RS17910;Name=LDO50_RS17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17910;old_locus_tag=BVI1335_2820005 NZ_CAJZAO010000204.1 Protein Homology CDS 5484 6359 . - 0 ID=cds-WP_011882333.1;Parent=gene-LDO50_RS17910;Dbxref=GenBank:WP_011882333.1;Name=WP_011882333.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658949.1;locus_tag=LDO50_RS17910;product=LysR family transcriptional regulator;protein_id=WP_011882333.1;transl_table=11 NZ_CAJZAO010000204.1 RefSeq gene 6513 7766 . + . ID=gene-LDO50_RS17915;Name=LDO50_RS17915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17915;old_locus_tag=BVI1335_2820006 NZ_CAJZAO010000204.1 Protein Homology CDS 6513 7766 . + 0 ID=cds-WP_059894094.1;Parent=gene-LDO50_RS17915;Dbxref=GenBank:WP_059894094.1;Name=WP_059894094.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724801.1;locus_tag=LDO50_RS17915;product=MFS transporter;protein_id=WP_059894094.1;transl_table=11 NZ_CAJZAO010000204.1 RefSeq gene 7885 9094 . - . ID=gene-LDO50_RS17920;Name=pdxR;end_range=9094,.;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=LDO50_RS17920;old_locus_tag=BVI1335_2820007;partial=true NZ_CAJZAO010000204.1 Protein Homology CDS 7885 9094 . - 1 ID=cds-WP_224019970.1;Parent=gene-LDO50_RS17920;Dbxref=GenBank:WP_224019970.1;Name=WP_224019970.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;end_range=9094,.;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882335.1;locus_tag=LDO50_RS17920;partial=true;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_224019970.1;transl_table=11 ##sequence-region NZ_CAJZAO010000205.1 1 3087 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000205.1 RefSeq region 1 3087 . + . ID=NZ_CAJZAO010000205.1:1..3087;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_283 NZ_CAJZAO010000205.1 RefSeq gene 1 220 . + . ID=gene-LDO50_RS17925;Name=LDO50_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17925;partial=true;start_range=.,1 NZ_CAJZAO010000205.1 GeneMarkS-2+ CDS 1 220 . + 1 ID=cds-WP_224019971.1;Parent=gene-LDO50_RS17925;Dbxref=GenBank:WP_224019971.1;Name=WP_224019971.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS17925;partial=true;product=hypothetical protein;protein_id=WP_224019971.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000205.1 RefSeq gene 229 1449 . - . ID=gene-LDO50_RS17930;Name=LDO50_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17930;old_locus_tag=BVI1335_2830002 NZ_CAJZAO010000205.1 Protein Homology CDS 229 1449 . - 0 ID=cds-WP_014723528.1;Parent=gene-LDO50_RS17930;Dbxref=GenBank:WP_014723528.1;Name=WP_014723528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602204.1;locus_tag=LDO50_RS17930;product=SAM-dependent methyltransferase;protein_id=WP_014723528.1;transl_table=11 NZ_CAJZAO010000205.1 RefSeq gene 1577 2221 . - . ID=gene-LDO50_RS17935;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=LDO50_RS17935;old_locus_tag=BVI1335_2830005 NZ_CAJZAO010000205.1 Protein Homology CDS 1577 2221 . - 0 ID=cds-WP_014723527.1;Parent=gene-LDO50_RS17935;Dbxref=GenBank:WP_014723527.1;Name=WP_014723527.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012399931.1;locus_tag=LDO50_RS17935;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_014723527.1;transl_table=11 NZ_CAJZAO010000205.1 RefSeq gene 2351 3087 . + . ID=gene-LDO50_RS17940;Name=LDO50_RS17940;end_range=3087,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17940;partial=true NZ_CAJZAO010000205.1 Protein Homology CDS 2351 3087 . + 0 ID=cds-WP_224019972.1;Parent=gene-LDO50_RS17940;Dbxref=GenBank:WP_224019972.1;Name=WP_224019972.1;Ontology_term=GO:0005524,GO:0008641,GO:0061503;end_range=3087,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,ubiquitin-like modifier activating enzyme activity|0008641||IEA,tRNA threonylcarbamoyladenosine dehydratase|0061503||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546059.1;locus_tag=LDO50_RS17940;partial=true;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=WP_224019972.1;transl_table=11 ##sequence-region NZ_CAJZAO010000206.1 1 6136 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000206.1 RefSeq region 1 6136 . + . ID=NZ_CAJZAO010000206.1:1..6136;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_284 NZ_CAJZAO010000206.1 RefSeq gene 1 1195 . + . ID=gene-LDO50_RS17945;Name=LDO50_RS17945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17945;old_locus_tag=BVI1335_2840001;partial=true;start_range=.,1 NZ_CAJZAO010000206.1 Protein Homology CDS 1 1195 . + 1 ID=cds-WP_224019973.1;Parent=gene-LDO50_RS17945;Dbxref=GenBank:WP_224019973.1;Name=WP_224019973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882513.1;locus_tag=LDO50_RS17945;partial=true;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_224019973.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000206.1 RefSeq gene 1230 2225 . - . ID=gene-LDO50_RS17950;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=LDO50_RS17950;old_locus_tag=BVI1335_2840002 NZ_CAJZAO010000206.1 Protein Homology CDS 1230 2225 . - 0 ID=cds-WP_224019974.1;Parent=gene-LDO50_RS17950;Dbxref=GenBank:WP_224019974.1;Name=WP_224019974.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=gspK;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882512.1;locus_tag=LDO50_RS17950;product=type II secretion system minor pseudopilin GspK;protein_id=WP_224019974.1;transl_table=11 NZ_CAJZAO010000206.1 RefSeq gene 2271 2843 . - . ID=gene-LDO50_RS17955;Name=LDO50_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17955;old_locus_tag=BVI1335_2840003 NZ_CAJZAO010000206.1 Protein Homology CDS 2271 2843 . - 0 ID=cds-WP_011882511.1;Parent=gene-LDO50_RS17955;Dbxref=GenBank:WP_011882511.1;Name=WP_011882511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882511.1;locus_tag=LDO50_RS17955;product=hypothetical protein;protein_id=WP_011882511.1;transl_table=11 NZ_CAJZAO010000206.1 RefSeq gene 3674 5314 . + . ID=gene-LDO50_RS17960;Name=LDO50_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17960;old_locus_tag=BVI1335_2840006 NZ_CAJZAO010000206.1 Protein Homology CDS 3674 5314 . + 0 ID=cds-WP_011882509.1;Parent=gene-LDO50_RS17960;Dbxref=GenBank:WP_011882509.1;Name=WP_011882509.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882509.1;locus_tag=LDO50_RS17960;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_011882509.1;transl_table=11 NZ_CAJZAO010000206.1 RefSeq gene 5383 6136 . + . ID=gene-LDO50_RS17965;Name=LDO50_RS17965;end_range=6136,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17965;partial=true NZ_CAJZAO010000206.1 Protein Homology CDS 5383 6136 . + 0 ID=cds-WP_224019975.1;Parent=gene-LDO50_RS17965;Dbxref=GenBank:WP_224019975.1;Name=WP_224019975.1;end_range=6136,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882508.1;locus_tag=LDO50_RS17965;partial=true;product=DUF2341 domain-containing protein;protein_id=WP_224019975.1;transl_table=11 ##sequence-region NZ_CAJZAO010000207.1 1 503 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000207.1 RefSeq region 1 503 . + . ID=NZ_CAJZAO010000207.1:1..503;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_285 NZ_CAJZAO010000207.1 RefSeq gene 100 503 . - . ID=gene-LDO50_RS17970;Name=LDO50_RS17970;end_range=503,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17970;old_locus_tag=BVI1335_2850002;partial=true NZ_CAJZAO010000207.1 Protein Homology CDS 100 503 . - 2 ID=cds-WP_224019976.1;Parent=gene-LDO50_RS17970;Dbxref=GenBank:WP_224019976.1;Name=WP_224019976.1;Ontology_term=GO:0016746;end_range=503,.;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193075.1;locus_tag=LDO50_RS17970;partial=true;product=2-oxo acid dehydrogenase subunit E2;protein_id=WP_224019976.1;transl_table=11 ##sequence-region NZ_CAJZAO010000208.1 1 8246 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000208.1 RefSeq region 1 8246 . + . ID=NZ_CAJZAO010000208.1:1..8246;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_286 NZ_CAJZAO010000208.1 RefSeq gene 1 314 . - . ID=gene-LDO50_RS31725;Name=LDO50_RS31725;end_range=314,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31725;partial=true;start_range=.,1 NZ_CAJZAO010000208.1 Protein Homology CDS 1 314 . - 2 ID=cds-WP_443797803.1;Parent=gene-LDO50_RS31725;Dbxref=GenBank:WP_443797803.1;Name=WP_443797803.1;end_range=314,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336609.1;locus_tag=LDO50_RS31725;partial=true;product=uracil-DNA glycosylase family protein;protein_id=WP_443797803.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000208.1 RefSeq pseudogene 325 509 . - . ID=gene-LDO50_RS31730;Name=LDO50_RS31730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31730;partial=true;pseudo=true;start_range=.,325 NZ_CAJZAO010000208.1 Protein Homology CDS 325 509 . - 0 ID=cds-LDO50_RS31730;Parent=gene-LDO50_RS31730;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725682.1;locus_tag=LDO50_RS31730;partial=true;product=uracil-DNA glycosylase;pseudo=true;start_range=.,325;transl_table=11 NZ_CAJZAO010000208.1 RefSeq gene 724 1173 . + . ID=gene-LDO50_RS17980;Name=LDO50_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17980;old_locus_tag=BVI1335_2860003 NZ_CAJZAO010000208.1 Protein Homology CDS 724 1173 . + 0 ID=cds-WP_059456176.1;Parent=gene-LDO50_RS17980;Dbxref=GenBank:WP_059456176.1;Name=WP_059456176.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008922684.1;locus_tag=LDO50_RS17980;product=response regulator;protein_id=WP_059456176.1;transl_table=11 NZ_CAJZAO010000208.1 RefSeq gene 1370 2293 . + . ID=gene-LDO50_RS17985;Name=LDO50_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17985;old_locus_tag=BVI1335_2860004 NZ_CAJZAO010000208.1 Protein Homology CDS 1370 2293 . + 0 ID=cds-WP_224019977.1;Parent=gene-LDO50_RS17985;Dbxref=GenBank:WP_224019977.1;Name=WP_224019977.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416809.1;locus_tag=LDO50_RS17985;product=LysR family transcriptional regulator;protein_id=WP_224019977.1;transl_table=11 NZ_CAJZAO010000208.1 RefSeq gene 2364 3656 . + . ID=gene-LDO50_RS17990;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=LDO50_RS17990;old_locus_tag=BVI1335_2860005 NZ_CAJZAO010000208.1 Protein Homology CDS 2364 3656 . + 0 ID=cds-WP_080938797.1;Parent=gene-LDO50_RS17990;Dbxref=GenBank:WP_080938797.1;Name=WP_080938797.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=dctA;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725685.1;locus_tag=LDO50_RS17990;product=C4-dicarboxylate transporter DctA;protein_id=WP_080938797.1;transl_table=11 NZ_CAJZAO010000208.1 RefSeq gene 3750 4532 . - . ID=gene-LDO50_RS17995;Name=LDO50_RS17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS17995;old_locus_tag=BVI1335_2860006 NZ_CAJZAO010000208.1 Protein Homology CDS 3750 4532 . - 0 ID=cds-WP_011879868.1;Parent=gene-LDO50_RS17995;Dbxref=GenBank:WP_011879868.1;Name=WP_011879868.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725686.1;locus_tag=LDO50_RS17995;product=substrate-binding domain-containing protein;protein_id=WP_011879868.1;transl_table=11 NZ_CAJZAO010000208.1 RefSeq gene 4597 5892 . - . ID=gene-LDO50_RS18000;Name=LDO50_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18000;old_locus_tag=BVI1335_2860007 NZ_CAJZAO010000208.1 Protein Homology CDS 4597 5892 . - 0 ID=cds-WP_011879869.1;Parent=gene-LDO50_RS18000;Dbxref=GenBank:WP_011879869.1;Name=WP_011879869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397982.1;locus_tag=LDO50_RS18000;product=MFS transporter;protein_id=WP_011879869.1;transl_table=11 NZ_CAJZAO010000208.1 RefSeq gene 6119 6601 . - . ID=gene-LDO50_RS18005;Name=LDO50_RS18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18005;old_locus_tag=BVI1335_2860008 NZ_CAJZAO010000208.1 Protein Homology CDS 6119 6601 . - 0 ID=cds-WP_011879870.1;Parent=gene-LDO50_RS18005;Dbxref=GenBank:WP_011879870.1;Name=WP_011879870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553962.1;locus_tag=LDO50_RS18005;product=PRC-barrel domain-containing protein;protein_id=WP_011879870.1;transl_table=11 NZ_CAJZAO010000208.1 RefSeq gene 6690 7121 . - . ID=gene-LDO50_RS18010;Name=LDO50_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18010;old_locus_tag=BVI1335_2860009 NZ_CAJZAO010000208.1 Protein Homology CDS 6690 7121 . - 0 ID=cds-WP_011879871.1;Parent=gene-LDO50_RS18010;Dbxref=GenBank:WP_011879871.1;Name=WP_011879871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523329.1;locus_tag=LDO50_RS18010;product=CBS domain-containing protein;protein_id=WP_011879871.1;transl_table=11 NZ_CAJZAO010000208.1 RefSeq gene 7204 7458 . - . ID=gene-LDO50_RS18015;Name=LDO50_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18015;old_locus_tag=BVI1335_2860010 NZ_CAJZAO010000208.1 Protein Homology CDS 7204 7458 . - 0 ID=cds-WP_011879872.1;Parent=gene-LDO50_RS18015;Dbxref=GenBank:WP_011879872.1;Name=WP_011879872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761504.1;locus_tag=LDO50_RS18015;product=hypothetical protein;protein_id=WP_011879872.1;transl_table=11 NZ_CAJZAO010000208.1 RefSeq gene 7627 7929 . + . ID=gene-LDO50_RS18020;Name=LDO50_RS18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18020;old_locus_tag=BVI1335_2860011 NZ_CAJZAO010000208.1 Protein Homology CDS 7627 7929 . + 0 ID=cds-WP_059459646.1;Parent=gene-LDO50_RS18020;Dbxref=GenBank:WP_059459646.1;Name=WP_059459646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349707.1;locus_tag=LDO50_RS18020;product=hypothetical protein;protein_id=WP_059459646.1;transl_table=11 ##sequence-region NZ_CAJZAO010000209.1 1 7540 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000209.1 RefSeq region 1 7540 . + . ID=NZ_CAJZAO010000209.1:1..7540;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_287 NZ_CAJZAO010000209.1 RefSeq gene 1 777 . - . ID=gene-LDO50_RS18025;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=LDO50_RS18025;partial=true;start_range=.,1 NZ_CAJZAO010000209.1 Protein Homology CDS 1 777 . - 0 ID=cds-WP_224019978.1;Parent=gene-LDO50_RS18025;Dbxref=GenBank:WP_224019978.1;Name=WP_224019978.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363067.1;locus_tag=LDO50_RS18025;partial=true;product=thiamine-phosphate kinase;protein_id=WP_224019978.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000209.1 RefSeq gene 878 3220 . + . ID=gene-LDO50_RS18030;Name=LDO50_RS18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18030;old_locus_tag=BVI1335_2870002 NZ_CAJZAO010000209.1 Protein Homology CDS 878 3220 . + 0 ID=cds-WP_011883244.1;Parent=gene-LDO50_RS18030;Dbxref=GenBank:WP_011883244.1;Name=WP_011883244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760308.1;locus_tag=LDO50_RS18030;product=NADP-dependent malic enzyme;protein_id=WP_011883244.1;transl_table=11 NZ_CAJZAO010000209.1 RefSeq gene 3597 4028 . + . ID=gene-LDO50_RS18035;Name=LDO50_RS18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18035;old_locus_tag=BVI1335_2870004 NZ_CAJZAO010000209.1 Protein Homology CDS 3597 4028 . + 0 ID=cds-WP_011883245.1;Parent=gene-LDO50_RS18035;Dbxref=GenBank:WP_011883245.1;Name=WP_011883245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194152.1;locus_tag=LDO50_RS18035;product=ribonuclease;protein_id=WP_011883245.1;transl_table=11 NZ_CAJZAO010000209.1 RefSeq gene 4045 4608 . + . ID=gene-LDO50_RS18040;Name=LDO50_RS18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18040;old_locus_tag=BVI1335_2870005 NZ_CAJZAO010000209.1 Protein Homology CDS 4045 4608 . + 0 ID=cds-WP_011883246.1;Parent=gene-LDO50_RS18040;Dbxref=GenBank:WP_011883246.1;Name=WP_011883246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350906.1;locus_tag=LDO50_RS18040;product=barstar family protein;protein_id=WP_011883246.1;transl_table=11 NZ_CAJZAO010000209.1 RefSeq gene 4593 7540 . - . ID=gene-LDO50_RS18045;Name=LDO50_RS18045;end_range=7540,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18045;old_locus_tag=BVI1335_2870006;partial=true NZ_CAJZAO010000209.1 Protein Homology CDS 4593 7540 . - 2 ID=cds-WP_224019979.1;Parent=gene-LDO50_RS18045;Dbxref=GenBank:WP_224019979.1;Name=WP_224019979.1;Ontology_term=GO:0006633,GO:0030639,GO:0034081;end_range=7540,.;gbkey=CDS;go_component=polyketide synthase complex|0034081||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: protein motif:HMM:NF012901.6;locus_tag=LDO50_RS18045;partial=true;product=type I polyketide synthase;protein_id=WP_224019979.1;transl_table=11 ##sequence-region NZ_CAJZAO010000210.1 1 951 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000210.1 RefSeq region 1 951 . + . ID=NZ_CAJZAO010000210.1:1..951;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_288 NZ_CAJZAO010000210.1 RefSeq gene 1 951 . + . ID=gene-LDO50_RS18050;Name=tuf;end_range=951,.;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=LDO50_RS18050;partial=true;start_range=.,1 NZ_CAJZAO010000210.1 Protein Homology CDS 1 951 . + 0 ID=cds-WP_224019980.1;Parent=gene-LDO50_RS18050;Dbxref=GenBank:WP_224019980.1;Name=WP_224019980.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;end_range=951,.;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011901887.1;locus_tag=LDO50_RS18050;partial=true;product=elongation factor Tu;protein_id=WP_224019980.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAO010000211.1 1 1684 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000211.1 RefSeq region 1 1684 . + . ID=NZ_CAJZAO010000211.1:1..1684;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_289 NZ_CAJZAO010000211.1 RefSeq gene 117 1205 . - . ID=gene-LDO50_RS18060;Name=LDO50_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18060;old_locus_tag=BVI1335_2890002 NZ_CAJZAO010000211.1 Protein Homology CDS 117 1205 . - 0 ID=cds-WP_034193390.1;Parent=gene-LDO50_RS18060;Dbxref=GenBank:WP_034193390.1;Name=WP_034193390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724145.1;locus_tag=LDO50_RS18060;product=extracellular solute-binding protein;protein_id=WP_034193390.1;transl_table=11 NZ_CAJZAO010000211.1 RefSeq pseudogene 1232 1684 . - . ID=gene-LDO50_RS18065;Name=LDO50_RS18065;end_range=1684,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS18065;old_locus_tag=BVI1335_2890003;partial=true;pseudo=true NZ_CAJZAO010000211.1 Protein Homology CDS 1232 1684 . - 0 ID=cds-LDO50_RS18065;Parent=gene-LDO50_RS18065;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1684,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881004.1;locus_tag=LDO50_RS18065;partial=true;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000212.1 1 519 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000212.1 RefSeq region 1 519 . + . ID=NZ_CAJZAO010000212.1:1..519;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_29 NZ_CAJZAO010000212.1 RefSeq gene 1 508 . - . ID=gene-LDO50_RS18070;Name=LDO50_RS18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18070;partial=true;start_range=.,1 NZ_CAJZAO010000212.1 GeneMarkS-2+ CDS 1 508 . - 0 ID=cds-WP_443797804.1;Parent=gene-LDO50_RS18070;Dbxref=GenBank:WP_443797804.1;Name=WP_443797804.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS18070;partial=true;product=hypothetical protein;protein_id=WP_443797804.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAO010000213.1 1 6690 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000213.1 RefSeq region 1 6690 . + . ID=NZ_CAJZAO010000213.1:1..6690;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_290 NZ_CAJZAO010000213.1 RefSeq pseudogene 1 187 . + . ID=gene-LDO50_RS18075;Name=LDO50_RS18075;end_range=187,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS18075;old_locus_tag=BVI1335_2900001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000213.1 Protein Homology CDS 1 187 . + 1 ID=cds-LDO50_RS18075;Parent=gene-LDO50_RS18075;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=187,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881942.1;locus_tag=LDO50_RS18075;partial=true;product=extensin;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000213.1 RefSeq gene 209 1807 . - . ID=gene-LDO50_RS18080;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=LDO50_RS18080;old_locus_tag=BVI1335_2900002 NZ_CAJZAO010000213.1 Protein Homology CDS 209 1807 . - 0 ID=cds-WP_045578121.1;Parent=gene-LDO50_RS18080;Dbxref=GenBank:WP_045578121.1;Name=WP_045578121.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403836.1;locus_tag=LDO50_RS18080;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_045578121.1;transl_table=11 NZ_CAJZAO010000213.1 RefSeq gene 1927 2490 . - . ID=gene-LDO50_RS18085;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=LDO50_RS18085;old_locus_tag=BVI1335_2900003 NZ_CAJZAO010000213.1 Protein Homology CDS 1927 2490 . - 0 ID=cds-WP_011881944.1;Parent=gene-LDO50_RS18085;Dbxref=GenBank:WP_011881944.1;Name=WP_011881944.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329783.1;locus_tag=LDO50_RS18085;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_011881944.1;transl_table=11 NZ_CAJZAO010000213.1 RefSeq gene 3051 3416 . - . ID=gene-LDO50_RS18090;Name=LDO50_RS18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18090;old_locus_tag=BVI1335_2900004 NZ_CAJZAO010000213.1 Protein Homology CDS 3051 3416 . - 0 ID=cds-WP_224019982.1;Parent=gene-LDO50_RS18090;Dbxref=GenBank:WP_224019982.1;Name=WP_224019982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725103.1;locus_tag=LDO50_RS18090;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_224019982.1;transl_table=11 NZ_CAJZAO010000213.1 RefSeq gene 3580 3798 . - . ID=gene-LDO50_RS18095;Name=LDO50_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18095;old_locus_tag=BVI1335_2900006 NZ_CAJZAO010000213.1 Protein Homology CDS 3580 3798 . - 0 ID=cds-WP_011881946.1;Parent=gene-LDO50_RS18095;Dbxref=GenBank:WP_011881946.1;Name=WP_011881946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881946.1;locus_tag=LDO50_RS18095;product=hypothetical protein;protein_id=WP_011881946.1;transl_table=11 NZ_CAJZAO010000213.1 RefSeq pseudogene 3910 4132 . + . ID=gene-LDO50_RS18100;Name=LDO50_RS18100;end_range=4132,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS18100;old_locus_tag=BVI1335_2900007;partial=true;pseudo=true;start_range=.,3910 NZ_CAJZAO010000213.1 Protein Homology CDS 3910 4132 . + 0 ID=cds-LDO50_RS18100;Parent=gene-LDO50_RS18100;Note=allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar%3B the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia%3B carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids%2C ammonia%2C and carbon dioxide%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4132,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658532.1;locus_tag=LDO50_RS18100;partial=true;product=Zn-dependent hydrolase;pseudo=true;start_range=.,3910;transl_table=11 NZ_CAJZAO010000213.1 RefSeq gene 4142 4978 . - . ID=gene-LDO50_RS18105;Name=LDO50_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18105;old_locus_tag=BVI1335_2900008 NZ_CAJZAO010000213.1 Protein Homology CDS 4142 4978 . - 0 ID=cds-WP_224019983.1;Parent=gene-LDO50_RS18105;Dbxref=GenBank:WP_224019983.1;Name=WP_224019983.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658533.1;locus_tag=LDO50_RS18105;product=c-type cytochrome;protein_id=WP_224019983.1;transl_table=11 NZ_CAJZAO010000213.1 RefSeq gene 5136 5417 . + . ID=gene-LDO50_RS18110;Name=LDO50_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18110;old_locus_tag=BVI1335_2900009 NZ_CAJZAO010000213.1 GeneMarkS-2+ CDS 5136 5417 . + 0 ID=cds-WP_224019984.1;Parent=gene-LDO50_RS18110;Dbxref=GenBank:WP_224019984.1;Name=WP_224019984.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS18110;product=DUF3626 domain-containing protein;protein_id=WP_224019984.1;transl_table=11 NZ_CAJZAO010000213.1 RefSeq gene 5464 6690 . - . ID=gene-LDO50_RS18115;Name=LDO50_RS18115;end_range=6690,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18115;old_locus_tag=BVI1335_2900010;partial=true NZ_CAJZAO010000213.1 Protein Homology CDS 5464 6690 . - 0 ID=cds-WP_372586104.1;Parent=gene-LDO50_RS18115;Dbxref=GenBank:WP_372586104.1;Name=WP_372586104.1;end_range=6690,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725098.1;locus_tag=LDO50_RS18115;partial=true;product=hypothetical protein;protein_id=WP_372586104.1;transl_table=11 ##sequence-region NZ_CAJZAO010000214.1 1 2336 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000214.1 RefSeq region 1 2336 . + . ID=NZ_CAJZAO010000214.1:1..2336;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_291 NZ_CAJZAO010000214.1 RefSeq gene 73 1287 . - . ID=gene-LDO50_RS18120;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=LDO50_RS18120;old_locus_tag=BVI1335_2910001 NZ_CAJZAO010000214.1 Protein Homology CDS 73 1287 . - 0 ID=cds-WP_011885604.1;Parent=gene-LDO50_RS18120;Dbxref=GenBank:WP_011885604.1;Name=WP_011885604.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698942.1;locus_tag=LDO50_RS18120;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_011885604.1;transl_table=11 NZ_CAJZAO010000214.1 RefSeq gene 1489 2031 . + . ID=gene-LDO50_RS18125;Name=LDO50_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18125;old_locus_tag=BVI1335_2910002 NZ_CAJZAO010000214.1 Protein Homology CDS 1489 2031 . + 0 ID=cds-WP_045578905.1;Parent=gene-LDO50_RS18125;Dbxref=GenBank:WP_045578905.1;Name=WP_045578905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763774.1;locus_tag=LDO50_RS18125;product=META domain-containing protein;protein_id=WP_045578905.1;transl_table=11 ##sequence-region NZ_CAJZAO010000215.1 1 708 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000215.1 RefSeq region 1 708 . + . ID=NZ_CAJZAO010000215.1:1..708;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_292 ##sequence-region NZ_CAJZAO010000216.1 1 2815 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000216.1 RefSeq region 1 2815 . + . ID=NZ_CAJZAO010000216.1:1..2815;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_293 NZ_CAJZAO010000216.1 RefSeq gene 1 500 . - . ID=gene-LDO50_RS18130;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=LDO50_RS18130;partial=true;start_range=.,1 NZ_CAJZAO010000216.1 Protein Homology CDS 1 500 . - 0 ID=cds-WP_224019986.1;Parent=gene-LDO50_RS18130;Dbxref=GenBank:WP_224019986.1;Name=WP_224019986.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495582.1;locus_tag=LDO50_RS18130;partial=true;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_224019986.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000216.1 RefSeq gene 497 898 . - . ID=gene-LDO50_RS18135;Name=LDO50_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18135;old_locus_tag=BVI1335_2930002 NZ_CAJZAO010000216.1 Protein Homology CDS 497 898 . - 0 ID=cds-WP_011885115.1;Parent=gene-LDO50_RS18135;Dbxref=GenBank:WP_011885115.1;Name=WP_011885115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193068.1;locus_tag=LDO50_RS18135;product=DnaJ family domain-containing protein;protein_id=WP_011885115.1;transl_table=11 NZ_CAJZAO010000216.1 RefSeq gene 1199 2599 . - . ID=gene-LDO50_RS18140;Name=guaA;end_range=2599,.;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=LDO50_RS18140;old_locus_tag=BVI1335_2930004;partial=true NZ_CAJZAO010000216.1 Protein Homology CDS 1199 2599 . - 0 ID=cds-WP_224019987.1;Parent=gene-LDO50_RS18140;Dbxref=GenBank:WP_224019987.1;Name=WP_224019987.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;end_range=2599,.;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402676.1;locus_tag=LDO50_RS18140;partial=true;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_224019987.1;transl_table=11 ##sequence-region NZ_CAJZAO010000217.1 1 4200 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000217.1 RefSeq region 1 4200 . + . ID=NZ_CAJZAO010000217.1:1..4200;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_294 NZ_CAJZAO010000217.1 RefSeq pseudogene 1 389 . + . ID=gene-LDO50_RS18145;Name=LDO50_RS18145;end_range=389,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS18145;old_locus_tag=BVI1335_2940001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000217.1 Protein Homology CDS 1 389 . + 1 ID=cds-LDO50_RS18145;Parent=gene-LDO50_RS18145;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=389,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656944.1;locus_tag=LDO50_RS18145;partial=true;product=efflux transporter outer membrane subunit;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000217.1 RefSeq gene 579 664 . + . ID=gene-LDO50_RS31735;Name=LDO50_RS31735;end_range=664,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31735;old_locus_tag=BVI1335_2940002;partial=true NZ_CAJZAO010000217.1 Protein Homology CDS 579 664 . + 0 ID=cds-WP_443797808.1;Parent=gene-LDO50_RS31735;Dbxref=GenBank:WP_443797808.1;Name=WP_443797808.1;Ontology_term=GO:0006355,GO:0003677;end_range=664,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004531377.1;locus_tag=LDO50_RS31735;partial=true;product=MerR family DNA-binding transcriptional regulator;protein_id=WP_443797808.1;transl_table=11 NZ_CAJZAO010000217.1 RefSeq gene 675 1459 . + . ID=gene-LDO50_RS18150;Name=LDO50_RS18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18150;old_locus_tag=BVI1335_2940003;partial=true;start_range=.,675 NZ_CAJZAO010000217.1 Protein Homology CDS 675 1459 . + 2 ID=cds-WP_443797805.1;Parent=gene-LDO50_RS18150;Dbxref=GenBank:WP_443797805.1;Name=WP_443797805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004531377.1;locus_tag=LDO50_RS18150;partial=true;product=TipAS antibiotic-recognition domain-containing protein;protein_id=WP_443797805.1;start_range=.,675;transl_table=11 NZ_CAJZAO010000217.1 RefSeq gene 1502 2156 . - . ID=gene-LDO50_RS31740;Name=LDO50_RS31740;end_range=2156,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31740;old_locus_tag=BVI1335_2940004;partial=true NZ_CAJZAO010000217.1 Protein Homology CDS 1502 2156 . - 1 ID=cds-WP_443797806.1;Parent=gene-LDO50_RS31740;Dbxref=GenBank:WP_443797806.1;Name=WP_443797806.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;end_range=2156,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884917.1;locus_tag=LDO50_RS31740;partial=true;product=sigma 54-interacting transcriptional regulator;protein_id=WP_443797806.1;transl_table=11 NZ_CAJZAO010000217.1 RefSeq gene 2167 2904 . - . ID=gene-LDO50_RS31745;Name=LDO50_RS31745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31745;old_locus_tag=BVI1335_2940005;partial=true;start_range=.,2167 NZ_CAJZAO010000217.1 Protein Homology CDS 2167 2904 . - 0 ID=cds-WP_443797807.1;Parent=gene-LDO50_RS31745;Dbxref=GenBank:WP_443797807.1;Name=WP_443797807.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399999.1;locus_tag=LDO50_RS31745;partial=true;product=sigma 54-interacting transcriptional regulator;protein_id=WP_443797807.1;start_range=.,2167;transl_table=11 NZ_CAJZAO010000217.1 RefSeq gene 3154 4038 . + . ID=gene-LDO50_RS18160;Name=LDO50_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18160;old_locus_tag=BVI1335_2940007 NZ_CAJZAO010000217.1 Protein Homology CDS 3154 4038 . + 0 ID=cds-WP_034193156.1;Parent=gene-LDO50_RS18160;Dbxref=GenBank:WP_034193156.1;Name=WP_034193156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328577.1;locus_tag=LDO50_RS18160;product=MBL fold metallo-hydrolase;protein_id=WP_034193156.1;transl_table=11 NZ_CAJZAO010000217.1 RefSeq gene 4081 4200 . + . ID=gene-LDO50_RS18165;Name=LDO50_RS18165;end_range=4200,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18165;partial=true NZ_CAJZAO010000217.1 Protein Homology CDS 4081 4200 . + 0 ID=cds-WP_224019988.1;Parent=gene-LDO50_RS18165;Dbxref=GenBank:WP_224019988.1;Name=WP_224019988.1;Ontology_term=GO:0016787;end_range=4200,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890921.1;locus_tag=LDO50_RS18165;partial=true;product=beta-lactamase hydrolase domain-containing protein;protein_id=WP_224019988.1;transl_table=11 ##sequence-region NZ_CAJZAO010000218.1 1 7852 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000218.1 RefSeq region 1 7852 . + . ID=NZ_CAJZAO010000218.1:1..7852;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_295 NZ_CAJZAO010000218.1 RefSeq gene 1 285 . + . ID=gene-LDO50_RS18170;Name=LDO50_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18170;old_locus_tag=BVI1335_2950001;partial=true;start_range=.,1 NZ_CAJZAO010000218.1 Protein Homology CDS 1 285 . + 0 ID=cds-WP_224019989.1;Parent=gene-LDO50_RS18170;Dbxref=GenBank:WP_224019989.1;Name=WP_224019989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882965.1;locus_tag=LDO50_RS18170;partial=true;product=DUF2239 family protein;protein_id=WP_224019989.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000218.1 RefSeq pseudogene 303 578 . + . ID=gene-LDO50_RS18175;Name=LDO50_RS18175;end_range=578,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS18175;partial=true;pseudo=true NZ_CAJZAO010000218.1 Protein Homology CDS 303 578 . + 0 ID=cds-LDO50_RS18175;Parent=gene-LDO50_RS18175;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016702;end_range=578,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of two atoms of oxygen|0016702||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327732.1;locus_tag=LDO50_RS18175;partial=true;product=carotenoid oxygenase family protein;pseudo=true;transl_table=11 NZ_CAJZAO010000218.1 RefSeq gene 571 1737 . - . ID=gene-LDO50_RS18180;Name=LDO50_RS18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18180;old_locus_tag=BVI1335_2950002 NZ_CAJZAO010000218.1 Protein Homology CDS 571 1737 . - 0 ID=cds-WP_011882967.1;Parent=gene-LDO50_RS18180;Dbxref=GenBank:WP_011882967.1;Name=WP_011882967.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497436.1;locus_tag=LDO50_RS18180;product=ABC transporter permease;protein_id=WP_011882967.1;transl_table=11 NZ_CAJZAO010000218.1 RefSeq gene 1742 2896 . - . ID=gene-LDO50_RS18185;Name=LDO50_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18185;old_locus_tag=BVI1335_2950003 NZ_CAJZAO010000218.1 Protein Homology CDS 1742 2896 . - 0 ID=cds-WP_014722257.1;Parent=gene-LDO50_RS18185;Dbxref=GenBank:WP_014722257.1;Name=WP_014722257.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546674.1;locus_tag=LDO50_RS18185;product=ABC transporter permease;protein_id=WP_014722257.1;transl_table=11 NZ_CAJZAO010000218.1 RefSeq gene 2915 3613 . - . ID=gene-LDO50_RS18190;Name=LDO50_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18190;old_locus_tag=BVI1335_2950004 NZ_CAJZAO010000218.1 Protein Homology CDS 2915 3613 . - 0 ID=cds-WP_014722258.1;Parent=gene-LDO50_RS18190;Dbxref=GenBank:WP_014722258.1;Name=WP_014722258.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413520.1;locus_tag=LDO50_RS18190;product=ABC transporter ATP-binding protein;protein_id=WP_014722258.1;transl_table=11 NZ_CAJZAO010000218.1 RefSeq gene 3624 4829 . - . ID=gene-LDO50_RS18195;Name=LDO50_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18195;old_locus_tag=BVI1335_2950005 NZ_CAJZAO010000218.1 Protein Homology CDS 3624 4829 . - 0 ID=cds-WP_176321827.1;Parent=gene-LDO50_RS18195;Dbxref=GenBank:WP_176321827.1;Name=WP_176321827.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484502.1;locus_tag=LDO50_RS18195;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_176321827.1;transl_table=11 NZ_CAJZAO010000218.1 RefSeq gene 5194 5427 . + . ID=gene-LDO50_RS18200;Name=LDO50_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18200;old_locus_tag=BVI1335_2950006 NZ_CAJZAO010000218.1 Protein Homology CDS 5194 5427 . + 0 ID=cds-WP_014722260.1;Parent=gene-LDO50_RS18200;Dbxref=GenBank:WP_014722260.1;Name=WP_014722260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327737.1;locus_tag=LDO50_RS18200;product=hypothetical protein;protein_id=WP_014722260.1;transl_table=11 NZ_CAJZAO010000218.1 RefSeq gene 5601 6545 . + . ID=gene-LDO50_RS18205;Name=LDO50_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18205;old_locus_tag=BVI1335_2950007 NZ_CAJZAO010000218.1 Protein Homology CDS 5601 6545 . + 0 ID=cds-WP_224019990.1;Parent=gene-LDO50_RS18205;Dbxref=GenBank:WP_224019990.1;Name=WP_224019990.1;Ontology_term=GO:0016491,GO:0050661,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023775.1;locus_tag=LDO50_RS18205;product=NAD(P)-dependent oxidoreductase;protein_id=WP_224019990.1;transl_table=11 NZ_CAJZAO010000218.1 RefSeq gene 6616 7251 . + . ID=gene-LDO50_RS18210;Name=LDO50_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18210;old_locus_tag=BVI1335_2950008 NZ_CAJZAO010000218.1 Protein Homology CDS 6616 7251 . + 0 ID=cds-WP_011882973.1;Parent=gene-LDO50_RS18210;Dbxref=GenBank:WP_011882973.1;Name=WP_011882973.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011324959.1;locus_tag=LDO50_RS18210;product=LysE family translocator;protein_id=WP_011882973.1;transl_table=11 NZ_CAJZAO010000218.1 RefSeq pseudogene 7527 7852 . - . ID=gene-LDO50_RS18215;Name=LDO50_RS18215;end_range=7852,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS18215;old_locus_tag=BVI1335_2950010;partial=true;pseudo=true NZ_CAJZAO010000218.1 Protein Homology CDS 7527 7852 . - 2 ID=cds-LDO50_RS18215;Parent=gene-LDO50_RS18215;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=7852,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546667.1;locus_tag=LDO50_RS18215;partial=true;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000219.1 1 6645 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000219.1 RefSeq region 1 6645 . + . ID=NZ_CAJZAO010000219.1:1..6645;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_296 NZ_CAJZAO010000219.1 RefSeq pseudogene 1 1104 . + . ID=gene-LDO50_RS18220;Name=LDO50_RS18220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS18220;old_locus_tag=BVI1335_2960001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000219.1 Protein Homology CDS 1 1104 . + 0 ID=cds-LDO50_RS18220;Parent=gene-LDO50_RS18220;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723000.1;locus_tag=LDO50_RS18220;partial=true;product=rhomboid family intramembrane serine protease;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000219.1 RefSeq gene 1279 2094 . + . ID=gene-LDO50_RS18225;Name=LDO50_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18225;old_locus_tag=BVI1335_2960002 NZ_CAJZAO010000219.1 Protein Homology CDS 1279 2094 . + 0 ID=cds-WP_034193107.1;Parent=gene-LDO50_RS18225;Dbxref=GenBank:WP_034193107.1;Name=WP_034193107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483955.1;locus_tag=LDO50_RS18225;product=ABC transporter substrate-binding protein;protein_id=WP_034193107.1;transl_table=11 NZ_CAJZAO010000219.1 RefSeq gene 2224 2946 . + . ID=gene-LDO50_RS18230;Name=LDO50_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18230;old_locus_tag=BVI1335_2960004 NZ_CAJZAO010000219.1 Protein Homology CDS 2224 2946 . + 0 ID=cds-WP_014723001.1;Parent=gene-LDO50_RS18230;Dbxref=GenBank:WP_014723001.1;Name=WP_014723001.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351917.1;locus_tag=LDO50_RS18230;product=amino acid ABC transporter permease;protein_id=WP_014723001.1;transl_table=11 NZ_CAJZAO010000219.1 RefSeq gene 2949 3674 . + . ID=gene-LDO50_RS18235;Name=LDO50_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18235;old_locus_tag=BVI1335_2960003 NZ_CAJZAO010000219.1 Protein Homology CDS 2949 3674 . + 0 ID=cds-WP_011884774.1;Parent=gene-LDO50_RS18235;Dbxref=GenBank:WP_011884774.1;Name=WP_011884774.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545358.1;locus_tag=LDO50_RS18235;product=amino acid ABC transporter permease;protein_id=WP_011884774.1;transl_table=11 NZ_CAJZAO010000219.1 RefSeq gene 3893 5161 . - . ID=gene-LDO50_RS18240;Name=LDO50_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18240;old_locus_tag=BVI1335_2960005 NZ_CAJZAO010000219.1 Protein Homology CDS 3893 5161 . - 0 ID=cds-WP_069222176.1;Parent=gene-LDO50_RS18240;Dbxref=GenBank:WP_069222176.1;Name=WP_069222176.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656807.1;locus_tag=LDO50_RS18240;product=M23 family metallopeptidase;protein_id=WP_069222176.1;transl_table=11 NZ_CAJZAO010000219.1 RefSeq gene 5469 6134 . - . ID=gene-LDO50_RS18245;Name=LDO50_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18245;old_locus_tag=BVI1335_2960006 NZ_CAJZAO010000219.1 Protein Homology CDS 5469 6134 . - 0 ID=cds-WP_011884784.1;Parent=gene-LDO50_RS18245;Dbxref=GenBank:WP_011884784.1;Name=WP_011884784.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213378.1;locus_tag=LDO50_RS18245;product=TetR family transcriptional regulator;protein_id=WP_011884784.1;transl_table=11 NZ_CAJZAO010000219.1 RefSeq pseudogene 6287 6645 . + . ID=gene-LDO50_RS18250;Name=LDO50_RS18250;end_range=6645,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS18250;partial=true;pseudo=true NZ_CAJZAO010000219.1 Protein Homology CDS 6287 6645 . + 0 ID=cds-LDO50_RS18250;Parent=gene-LDO50_RS18250;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=6645,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764344.1;locus_tag=LDO50_RS18250;partial=true;product=biotin/lipoyl-binding protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000220.1 1 2462 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000220.1 RefSeq region 1 2462 . + . ID=NZ_CAJZAO010000220.1:1..2462;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_297 NZ_CAJZAO010000220.1 RefSeq pseudogene 105 1499 . + . ID=gene-LDO50_RS18255;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=pseudogene;locus_tag=LDO50_RS18255;old_locus_tag=BVI1335_2970002;partial=true;pseudo=true;start_range=.,105 NZ_CAJZAO010000220.1 Protein Homology CDS 105 1499 . + 0 ID=cds-LDO50_RS18255;Parent=gene-LDO50_RS18255;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886305.1;locus_tag=LDO50_RS18255;partial=true;product=flagellar protein export ATPase FliI;pseudo=true;start_range=.,105;transl_table=11 NZ_CAJZAO010000220.1 RefSeq gene 1505 1963 . + . ID=gene-LDO50_RS18260;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=LDO50_RS18260;old_locus_tag=BVI1335_2970001 NZ_CAJZAO010000220.1 Protein Homology CDS 1505 1963 . + 0 ID=cds-WP_011886306.1;Parent=gene-LDO50_RS18260;Dbxref=GenBank:WP_011886306.1;Name=WP_011886306.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895750.1;locus_tag=LDO50_RS18260;product=flagellar export protein FliJ;protein_id=WP_011886306.1;transl_table=11 NZ_CAJZAO010000220.1 RefSeq pseudogene 1995 2462 . + . ID=gene-LDO50_RS18265;Name=LDO50_RS18265;end_range=2462,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS18265;partial=true;pseudo=true NZ_CAJZAO010000220.1 Protein Homology CDS 1995 2462 . + 0 ID=cds-LDO50_RS18265;Parent=gene-LDO50_RS18265;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2462,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658180.1;locus_tag=LDO50_RS18265;partial=true;product=flagellar hook-length control protein FliK;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000221.1 1 1528 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000221.1 RefSeq region 1 1528 . + . ID=NZ_CAJZAO010000221.1:1..1528;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_298 NZ_CAJZAO010000221.1 RefSeq gene 250 1485 . + . ID=gene-LDO50_RS18270;Name=LDO50_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18270;old_locus_tag=BVI1335_2980001 NZ_CAJZAO010000221.1 Protein Homology CDS 250 1485 . + 0 ID=cds-WP_059606722.1;Parent=gene-LDO50_RS18270;Dbxref=GenBank:WP_059606722.1;Name=WP_059606722.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882724.1;locus_tag=LDO50_RS18270;product=IS110 family transposase;protein_id=WP_059606722.1;transl_table=11 ##sequence-region NZ_CAJZAO010000222.1 1 1946 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000222.1 RefSeq region 1 1946 . + . ID=NZ_CAJZAO010000222.1:1..1946;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_299 NZ_CAJZAO010000222.1 RefSeq gene 1 403 . + . ID=gene-LDO50_RS18275;Name=LDO50_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18275;old_locus_tag=BVI1335_2990001;partial=true;start_range=.,1 NZ_CAJZAO010000222.1 Protein Homology CDS 1 403 . + 1 ID=cds-WP_224019992.1;Parent=gene-LDO50_RS18275;Dbxref=GenBank:WP_224019992.1;Name=WP_224019992.1;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753992.1;locus_tag=LDO50_RS18275;partial=true;product=LysR family substrate-binding domain-containing protein;protein_id=WP_224019992.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000222.1 RefSeq gene 894 1946 . + . ID=gene-LDO50_RS18280;Name=LDO50_RS18280;end_range=1946,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18280;partial=true NZ_CAJZAO010000222.1 Protein Homology CDS 894 1946 . + 0 ID=cds-WP_224019993.1;Parent=gene-LDO50_RS18280;Dbxref=GenBank:WP_224019993.1;Name=WP_224019993.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;end_range=1946,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363519.1;locus_tag=LDO50_RS18280;partial=true;product=MFS transporter;protein_id=WP_224019993.1;transl_table=11 ##sequence-region NZ_CAJZAO010000223.1 1 6466 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000223.1 RefSeq region 1 6466 . + . ID=NZ_CAJZAO010000223.1:1..6466;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_3 NZ_CAJZAO010000223.1 RefSeq pseudogene 1 104 . + . ID=gene-LDO50_RS18285;Name=LDO50_RS18285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS18285;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000223.1 Protein Homology CDS 1 104 . + 2 ID=cds-LDO50_RS18285;Parent=gene-LDO50_RS18285;Note=catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004546528.1;locus_tag=LDO50_RS18285;partial=true;product=cobalamin biosynthesis protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000223.1 RefSeq gene 139 741 . + . ID=gene-LDO50_RS18290;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=LDO50_RS18290;old_locus_tag=BVI1335_30001 NZ_CAJZAO010000223.1 Protein Homology CDS 139 741 . + 0 ID=cds-WP_011884821.1;Parent=gene-LDO50_RS18290;Dbxref=GenBank:WP_011884821.1;Name=WP_011884821.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018442736.1;locus_tag=LDO50_RS18290;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_011884821.1;transl_table=11 NZ_CAJZAO010000223.1 RefSeq gene 745 1351 . + . ID=gene-LDO50_RS31750;Name=LDO50_RS31750;end_range=1351,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31750;old_locus_tag=BVI1335_30002;partial=true NZ_CAJZAO010000223.1 Protein Homology CDS 745 1351 . + 0 ID=cds-WP_443797809.1;Parent=gene-LDO50_RS31750;Dbxref=GenBank:WP_443797809.1;Name=WP_443797809.1;end_range=1351,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496450.1;locus_tag=LDO50_RS31750;partial=true;product=nucleotide-binding protein;protein_id=WP_443797809.1;transl_table=11 NZ_CAJZAO010000223.1 RefSeq pseudogene 1362 1949 . + . ID=gene-LDO50_RS31755;Name=LDO50_RS31755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31755;old_locus_tag=BVI1335_30003;partial=true;pseudo=true;start_range=.,1362 NZ_CAJZAO010000223.1 Protein Homology CDS 1362 1949 . + 0 ID=cds-LDO50_RS31755;Parent=gene-LDO50_RS31755;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723022.1;locus_tag=LDO50_RS31755;partial=true;product=cobyrinate a%2Cc-diamide synthase;pseudo=true;start_range=.,1362;transl_table=11 NZ_CAJZAO010000223.1 RefSeq gene 1992 3155 . - . ID=gene-LDO50_RS18300;Name=LDO50_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18300;old_locus_tag=BVI1335_30004 NZ_CAJZAO010000223.1 Protein Homology CDS 1992 3155 . - 0 ID=cds-WP_045579119.1;Parent=gene-LDO50_RS18300;Dbxref=GenBank:WP_045579119.1;Name=WP_045579119.1;Ontology_term=GO:0016787,GO:0016810;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328465.1;locus_tag=LDO50_RS18300;product=M20 aminoacylase family protein;protein_id=WP_045579119.1;transl_table=11 NZ_CAJZAO010000223.1 RefSeq gene 3664 5100 . - . ID=gene-LDO50_RS30855;Name=LDO50_RS30855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30855;old_locus_tag=BVI1335_30005 NZ_CAJZAO010000223.1 Protein Homology CDS 3664 5100 . - 0 ID=cds-WP_080484216.1;Parent=gene-LDO50_RS30855;Dbxref=GenBank:WP_080484216.1;Name=WP_080484216.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723019.1;locus_tag=LDO50_RS30855;product=trypsin-like serine protease;protein_id=WP_080484216.1;transl_table=11 NZ_CAJZAO010000223.1 RefSeq gene 5583 6308 . - . ID=gene-LDO50_RS18320;Name=LDO50_RS18320;end_range=6308,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18320;old_locus_tag=BVI1335_30006;partial=true NZ_CAJZAO010000223.1 Protein Homology CDS 5583 6308 . - 0 ID=cds-WP_224019996.1;Parent=gene-LDO50_RS18320;Dbxref=GenBank:WP_224019996.1;Name=WP_224019996.1;Ontology_term=GO:0008080,GO:0016746;end_range=6308,.;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412901.1;locus_tag=LDO50_RS18320;partial=true;product=GNAT family N-acetyltransferase;protein_id=WP_224019996.1;transl_table=11 NZ_CAJZAO010000223.1 RefSeq pseudogene 6319 6466 . - . ID=gene-LDO50_RS18325;Name=LDO50_RS18325;end_range=6466,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS18325;partial=true;pseudo=true;start_range=.,6319 NZ_CAJZAO010000223.1 Protein Homology CDS 6319 6466 . - 1 ID=cds-LDO50_RS18325;Parent=gene-LDO50_RS18325;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=6466,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213359.1;locus_tag=LDO50_RS18325;partial=true;product=N(5)-hydroxyornithine transformylase PvdF;pseudo=true;start_range=.,6319;transl_table=11 ##sequence-region NZ_CAJZAO010000224.1 1 18824 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000224.1 RefSeq region 1 18824 . + . ID=NZ_CAJZAO010000224.1:1..18824;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_30 NZ_CAJZAO010000224.1 RefSeq gene 159 772 . - . ID=gene-LDO50_RS18330;Name=LDO50_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18330;partial=true;start_range=.,159 NZ_CAJZAO010000224.1 Protein Homology CDS 159 772 . - 0 ID=cds-WP_443797810.1;Parent=gene-LDO50_RS18330;Dbxref=GenBank:WP_443797810.1;Name=WP_443797810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339416.1;locus_tag=LDO50_RS18330;partial=true;product=transglycosylase domain-containing protein;protein_id=WP_443797810.1;start_range=.,159;transl_table=11 NZ_CAJZAO010000224.1 RefSeq gene 877 1260 . - . ID=gene-LDO50_RS31105;Name=LDO50_RS31105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31105;old_locus_tag=BVI1335_300003 NZ_CAJZAO010000224.1 GeneMarkS-2+ CDS 877 1260 . - 0 ID=cds-WP_249178165.1;Parent=gene-LDO50_RS31105;Dbxref=GenBank:WP_249178165.1;Name=WP_249178165.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS31105;product=hypothetical protein;protein_id=WP_249178165.1;transl_table=11 NZ_CAJZAO010000224.1 RefSeq gene 1302 1940 . + . ID=gene-LDO50_RS18340;Name=LDO50_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18340;old_locus_tag=BVI1335_300004 NZ_CAJZAO010000224.1 Protein Homology CDS 1302 1940 . + 0 ID=cds-WP_034194744.1;Parent=gene-LDO50_RS18340;Dbxref=GenBank:WP_034194744.1;Name=WP_034194744.1;Ontology_term=GO:0043934,GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;go_process=sporulation|0043934||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546936.1;locus_tag=LDO50_RS18340;product=FMN-binding negative transcriptional regulator;protein_id=WP_034194744.1;transl_table=11 NZ_CAJZAO010000224.1 RefSeq gene 1990 2580 . - . ID=gene-LDO50_RS18345;Name=LDO50_RS18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18345;old_locus_tag=BVI1335_300005 NZ_CAJZAO010000224.1 Protein Homology CDS 1990 2580 . - 0 ID=cds-WP_014724042.1;Parent=gene-LDO50_RS18345;Dbxref=GenBank:WP_014724042.1;Name=WP_014724042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405941.1;locus_tag=LDO50_RS18345;product=thioredoxin family protein;protein_id=WP_014724042.1;transl_table=11 NZ_CAJZAO010000224.1 RefSeq gene 2804 3544 . + . ID=gene-LDO50_RS18350;Name=LDO50_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18350;old_locus_tag=BVI1335_300007 NZ_CAJZAO010000224.1 Protein Homology CDS 2804 3544 . + 0 ID=cds-WP_034194743.1;Parent=gene-LDO50_RS18350;Dbxref=GenBank:WP_034194743.1;Name=WP_034194743.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750896.1;locus_tag=LDO50_RS18350;product=response regulator;protein_id=WP_034194743.1;transl_table=11 NZ_CAJZAO010000224.1 RefSeq gene 3556 4878 . + . ID=gene-LDO50_RS18355;Name=LDO50_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18355;old_locus_tag=BVI1335_300006 NZ_CAJZAO010000224.1 Protein Homology CDS 3556 4878 . + 0 ID=cds-WP_059669193.1;Parent=gene-LDO50_RS18355;Dbxref=GenBank:WP_059669193.1;Name=WP_059669193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480535.1;locus_tag=LDO50_RS18355;product=ATP-binding protein;protein_id=WP_059669193.1;transl_table=11 NZ_CAJZAO010000224.1 RefSeq gene 5091 5453 . + . ID=gene-LDO50_RS18360;Name=LDO50_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18360;old_locus_tag=BVI1335_300008 NZ_CAJZAO010000224.1 GeneMarkS-2+ CDS 5091 5453 . + 0 ID=cds-WP_131753930.1;Parent=gene-LDO50_RS18360;Dbxref=GenBank:WP_131753930.1;Name=WP_131753930.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS18360;product=hypothetical protein;protein_id=WP_131753930.1;transl_table=11 NZ_CAJZAO010000224.1 RefSeq gene 5559 6122 . + . ID=gene-LDO50_RS18365;Name=LDO50_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18365 NZ_CAJZAO010000224.1 GeneMarkS-2+ CDS 5559 6122 . + 0 ID=cds-WP_131753929.1;Parent=gene-LDO50_RS18365;Dbxref=GenBank:WP_131753929.1;Name=WP_131753929.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS18365;product=hypothetical protein;protein_id=WP_131753929.1;transl_table=11 NZ_CAJZAO010000224.1 RefSeq gene 6318 6743 . - . ID=gene-LDO50_RS18370;Name=LDO50_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18370;old_locus_tag=BVI1335_300011 NZ_CAJZAO010000224.1 Protein Homology CDS 6318 6743 . - 0 ID=cds-WP_059475914.1;Parent=gene-LDO50_RS18370;Dbxref=GenBank:WP_059475914.1;Name=WP_059475914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724038.1;locus_tag=LDO50_RS18370;product=cupin domain-containing protein;protein_id=WP_059475914.1;transl_table=11 NZ_CAJZAO010000224.1 RefSeq gene 6821 7648 . - . ID=gene-LDO50_RS18375;Name=LDO50_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18375;old_locus_tag=BVI1335_300012 NZ_CAJZAO010000224.1 Protein Homology CDS 6821 7648 . - 0 ID=cds-WP_014724037.1;Parent=gene-LDO50_RS18375;Dbxref=GenBank:WP_014724037.1;Name=WP_014724037.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724037.1;locus_tag=LDO50_RS18375;product=AraC family transcriptional regulator;protein_id=WP_014724037.1;transl_table=11 NZ_CAJZAO010000224.1 RefSeq gene 7838 8665 . - . ID=gene-LDO50_RS18380;Name=LDO50_RS18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18380;old_locus_tag=BVI1335_300013 NZ_CAJZAO010000224.1 Protein Homology CDS 7838 8665 . - 0 ID=cds-WP_059669177.1;Parent=gene-LDO50_RS18380;Dbxref=GenBank:WP_059669177.1;Name=WP_059669177.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013952702.1;locus_tag=LDO50_RS18380;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_059669177.1;transl_table=11 NZ_CAJZAO010000224.1 RefSeq gene 8765 9136 . + . ID=gene-LDO50_RS18385;Name=LDO50_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18385;old_locus_tag=BVI1335_300014 NZ_CAJZAO010000224.1 Protein Homology CDS 8765 9136 . + 0 ID=cds-WP_014724036.1;Parent=gene-LDO50_RS18385;Dbxref=GenBank:WP_014724036.1;Name=WP_014724036.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724036.1;locus_tag=LDO50_RS18385;product=heavy metal-responsive transcriptional regulator;protein_id=WP_014724036.1;transl_table=11 NZ_CAJZAO010000224.1 RefSeq gene 9529 10926 . + . ID=gene-LDO50_RS18390;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=LDO50_RS18390;old_locus_tag=BVI1335_300015 NZ_CAJZAO010000224.1 Protein Homology CDS 9529 10926 . + 0 ID=cds-WP_014724035.1;Parent=gene-LDO50_RS18390;Dbxref=GenBank:WP_014724035.1;Name=WP_014724035.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724035.1;locus_tag=LDO50_RS18390;product=cysteine--tRNA ligase;protein_id=WP_014724035.1;transl_table=11 NZ_CAJZAO010000224.1 RefSeq gene 11180 12574 . + . ID=gene-LDO50_RS18395;Name=LDO50_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18395;old_locus_tag=BVI1335_300017 NZ_CAJZAO010000224.1 Protein Homology CDS 11180 12574 . + 0 ID=cds-WP_196480344.1;Parent=gene-LDO50_RS18395;Dbxref=GenBank:WP_196480344.1;Name=WP_196480344.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF048867.1;locus_tag=LDO50_RS18395;product=Kelch repeat-containing protein;protein_id=WP_196480344.1;transl_table=11 NZ_CAJZAO010000224.1 RefSeq gene 12915 13526 . - . ID=gene-LDO50_RS18400;Name=LDO50_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18400;old_locus_tag=BVI1335_300018 NZ_CAJZAO010000224.1 Protein Homology CDS 12915 13526 . - 0 ID=cds-WP_059669192.1;Parent=gene-LDO50_RS18400;Dbxref=GenBank:WP_059669192.1;Name=WP_059669192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354013.1;locus_tag=LDO50_RS18400;product=alpha/beta fold hydrolase;protein_id=WP_059669192.1;transl_table=11 NZ_CAJZAO010000224.1 RefSeq gene 13580 14314 . - . ID=gene-LDO50_RS18405;Name=LDO50_RS18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18405;old_locus_tag=BVI1335_300019 NZ_CAJZAO010000224.1 Protein Homology CDS 13580 14314 . - 0 ID=cds-WP_059669176.1;Parent=gene-LDO50_RS18405;Dbxref=GenBank:WP_059669176.1;Name=WP_059669176.1;Ontology_term=GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898402.1;locus_tag=LDO50_RS18405;product=metallophosphoesterase family protein;protein_id=WP_059669176.1;transl_table=11 NZ_CAJZAO010000224.1 RefSeq pseudogene 14431 14505 . - . ID=gene-LDO50_RS30985;Name=LDO50_RS30985;end_range=14505,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS30985;partial=true;pseudo=true NZ_CAJZAO010000224.1 Protein Homology CDS 14431 14505 . - 0 ID=cds-LDO50_RS30985;Parent=gene-LDO50_RS30985;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=14505,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366832.1;locus_tag=LDO50_RS30985;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_CAJZAO010000224.1 RefSeq gene 14835 16757 . + . ID=gene-LDO50_RS18410;Name=LDO50_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18410;old_locus_tag=BVI1335_300020 NZ_CAJZAO010000224.1 Protein Homology CDS 14835 16757 . + 0 ID=cds-WP_224019997.1;Parent=gene-LDO50_RS18410;Dbxref=GenBank:WP_224019997.1;Name=WP_224019997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405949.1;locus_tag=LDO50_RS18410;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_224019997.1;transl_table=11 NZ_CAJZAO010000224.1 RefSeq gene 16786 18824 . - . ID=gene-LDO50_RS18415;Name=LDO50_RS18415;end_range=18824,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18415;old_locus_tag=BVI1335_300021;partial=true NZ_CAJZAO010000224.1 Protein Homology CDS 16786 18824 . - 2 ID=cds-WP_224019998.1;Parent=gene-LDO50_RS18415;Dbxref=GenBank:WP_224019998.1;Name=WP_224019998.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;end_range=18824,.;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880851.1;locus_tag=LDO50_RS18415;partial=true;product=TonB-dependent siderophore receptor;protein_id=WP_224019998.1;transl_table=11 ##sequence-region NZ_CAJZAO010000225.1 1 2444 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000225.1 RefSeq region 1 2444 . + . ID=NZ_CAJZAO010000225.1:1..2444;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_300 NZ_CAJZAO010000225.1 RefSeq gene 94 882 . - . ID=gene-LDO50_RS18420;Name=LDO50_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18420;old_locus_tag=BVI1335_3000002 NZ_CAJZAO010000225.1 Protein Homology CDS 94 882 . - 0 ID=cds-WP_045578633.1;Parent=gene-LDO50_RS18420;Dbxref=GenBank:WP_045578633.1;Name=WP_045578633.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477297.1;locus_tag=LDO50_RS18420;product=ABC transporter substrate-binding protein;protein_id=WP_045578633.1;transl_table=11 NZ_CAJZAO010000225.1 RefSeq gene 998 2152 . - . ID=gene-LDO50_RS18425;Name=LDO50_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18425;old_locus_tag=BVI1335_3000003 NZ_CAJZAO010000225.1 Protein Homology CDS 998 2152 . - 0 ID=cds-WP_011882827.1;Parent=gene-LDO50_RS18425;Dbxref=GenBank:WP_011882827.1;Name=WP_011882827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327613.1;locus_tag=LDO50_RS18425;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_011882827.1;transl_table=11 ##sequence-region NZ_CAJZAO010000226.1 1 2705 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000226.1 RefSeq region 1 2705 . + . ID=NZ_CAJZAO010000226.1:1..2705;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_301 NZ_CAJZAO010000226.1 RefSeq gene 1 397 . + . ID=gene-LDO50_RS18430;Name=LDO50_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18430;old_locus_tag=BVI1335_3010001;partial=true;start_range=.,1 NZ_CAJZAO010000226.1 Protein Homology CDS 1 397 . + 1 ID=cds-WP_224019999.1;Parent=gene-LDO50_RS18430;Dbxref=GenBank:WP_224019999.1;Name=WP_224019999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756449.1;locus_tag=LDO50_RS18430;partial=true;product=hypothetical protein;protein_id=WP_224019999.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000226.1 RefSeq gene 449 880 . + . ID=gene-LDO50_RS18435;Name=cadR;gbkey=Gene;gene=cadR;gene_biotype=protein_coding;locus_tag=LDO50_RS18435;old_locus_tag=BVI1335_3010002 NZ_CAJZAO010000226.1 Protein Homology CDS 449 880 . + 0 ID=cds-WP_011882831.1;Parent=gene-LDO50_RS18435;Dbxref=GenBank:WP_011882831.1;Name=WP_011882831.1;Ontology_term=GO:0045893,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;gene=cadR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195850.1;locus_tag=LDO50_RS18435;product=Cd(II)/Pb(II)-responsive transcriptional regulator;protein_id=WP_011882831.1;transl_table=11 NZ_CAJZAO010000226.1 RefSeq gene 949 1521 . + . ID=gene-LDO50_RS18440;Name=LDO50_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18440;old_locus_tag=BVI1335_3010003 NZ_CAJZAO010000226.1 Protein Homology CDS 949 1521 . + 0 ID=cds-WP_011882830.1;Parent=gene-LDO50_RS18440;Dbxref=GenBank:WP_011882830.1;Name=WP_011882830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408113.1;locus_tag=LDO50_RS18440;product=PadR family transcriptional regulator;protein_id=WP_011882830.1;transl_table=11 NZ_CAJZAO010000226.1 RefSeq gene 1547 2705 . - . ID=gene-LDO50_RS18445;Name=LDO50_RS18445;end_range=2705,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18445;old_locus_tag=BVI1335_3010004;partial=true NZ_CAJZAO010000226.1 Protein Homology CDS 1547 2705 . - 1 ID=cds-WP_224020000.1;Parent=gene-LDO50_RS18445;Dbxref=GenBank:WP_224020000.1;Name=WP_224020000.1;Ontology_term=GO:0016491,GO:0071949;end_range=2705,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546787.1;locus_tag=LDO50_RS18445;partial=true;product=FAD-binding oxidoreductase;protein_id=WP_224020000.1;transl_table=11 ##sequence-region NZ_CAJZAO010000227.1 1 1569 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000227.1 RefSeq region 1 1569 . + . ID=NZ_CAJZAO010000227.1:1..1569;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_302 NZ_CAJZAO010000227.1 RefSeq gene 1 177 . + . ID=gene-LDO50_RS18450;Name=LDO50_RS18450;end_range=177,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18450;partial=true;start_range=.,1 NZ_CAJZAO010000227.1 Protein Homology CDS 1 177 . + 0 ID=cds-WP_253074464.1;Parent=gene-LDO50_RS18450;Dbxref=GenBank:WP_253074464.1;Name=WP_253074464.1;end_range=177,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895580.1;locus_tag=LDO50_RS18450;partial=true;product=amidase family protein;protein_id=WP_253074464.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000227.1 RefSeq gene 296 1126 . - . ID=gene-LDO50_RS18455;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=LDO50_RS18455;old_locus_tag=BVI1335_3020002 NZ_CAJZAO010000227.1 Protein Homology CDS 296 1126 . - 0 ID=cds-WP_011882924.1;Parent=gene-LDO50_RS18455;Dbxref=GenBank:WP_011882924.1;Name=WP_011882924.1;Ontology_term=GO:0009086,GO:0004489,GO:0005829;gbkey=CDS;gene=metF;go_component=cytosol|0005829||IEA;go_function=methylenetetrahydrofolate reductase [NAD(P)H] activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484036.1;locus_tag=LDO50_RS18455;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=WP_011882924.1;transl_table=11 NZ_CAJZAO010000227.1 RefSeq gene 1151 1504 . - . ID=gene-LDO50_RS18460;Name=LDO50_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18460;old_locus_tag=BVI1335_3020004 NZ_CAJZAO010000227.1 Protein Homology CDS 1151 1504 . - 0 ID=cds-WP_011882923.1;Parent=gene-LDO50_RS18460;Dbxref=GenBank:WP_011882923.1;Name=WP_011882923.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906537.1;locus_tag=LDO50_RS18460;product=phage holin family protein;protein_id=WP_011882923.1;transl_table=11 ##sequence-region NZ_CAJZAO010000228.1 1 5714 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000228.1 RefSeq region 1 5714 . + . ID=NZ_CAJZAO010000228.1:1..5714;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_303 NZ_CAJZAO010000228.1 RefSeq gene 347 880 . + . ID=gene-LDO50_RS18465;Name=LDO50_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18465;old_locus_tag=BVI1335_3030001;partial=true;start_range=.,347 NZ_CAJZAO010000228.1 Protein Homology CDS 347 880 . + 0 ID=cds-WP_224020002.1;Parent=gene-LDO50_RS18465;Dbxref=GenBank:WP_224020002.1;Name=WP_224020002.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491806.1;locus_tag=LDO50_RS18465;partial=true;product=GntR family transcriptional regulator;protein_id=WP_224020002.1;start_range=.,347;transl_table=11 NZ_CAJZAO010000228.1 RefSeq gene 888 2264 . + . ID=gene-LDO50_RS18470;Name=LDO50_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18470;old_locus_tag=BVI1335_3030002 NZ_CAJZAO010000228.1 Protein Homology CDS 888 2264 . + 0 ID=cds-WP_059475606.1;Parent=gene-LDO50_RS18470;Dbxref=GenBank:WP_059475606.1;Name=WP_059475606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756770.1;locus_tag=LDO50_RS18470;product=amidase;protein_id=WP_059475606.1;transl_table=11 NZ_CAJZAO010000228.1 RefSeq gene 2414 2926 . + . ID=gene-LDO50_RS18475;Name=LDO50_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18475;old_locus_tag=BVI1335_3030003 NZ_CAJZAO010000228.1 Protein Homology CDS 2414 2926 . + 0 ID=cds-WP_011883773.1;Parent=gene-LDO50_RS18475;Dbxref=GenBank:WP_011883773.1;Name=WP_011883773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883773.1;locus_tag=LDO50_RS18475;product=disulfide bond formation protein B;protein_id=WP_011883773.1;transl_table=11 NZ_CAJZAO010000228.1 RefSeq gene 3482 4492 . + . ID=gene-LDO50_RS18480;Name=xdhC;gbkey=Gene;gene=xdhC;gene_biotype=protein_coding;locus_tag=LDO50_RS18480;old_locus_tag=BVI1335_3030004 NZ_CAJZAO010000228.1 Protein Homology CDS 3482 4492 . + 0 ID=cds-WP_224020001.1;Parent=gene-LDO50_RS18480;Dbxref=GenBank:WP_224020001.1;Name=WP_224020001.1;Ontology_term=GO:0009115,GO:0065003,GO:0043546;gbkey=CDS;gene=xdhC;go_function=molybdopterin cofactor binding|0043546||IEA;go_process=xanthine catabolic process|0009115||IEA,protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756768.1;locus_tag=LDO50_RS18480;product=xanthine dehydrogenase accessory protein XdhC;protein_id=WP_224020001.1;transl_table=11 NZ_CAJZAO010000228.1 RefSeq gene 4511 5434 . + . ID=gene-LDO50_RS18485;Name=LDO50_RS18485;end_range=5434,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18485;old_locus_tag=BVI1335_3030005;partial=true NZ_CAJZAO010000228.1 Protein Homology CDS 4511 5434 . + 0 ID=cds-WP_224020003.1;Parent=gene-LDO50_RS18485;Dbxref=GenBank:WP_224020003.1;Name=WP_224020003.1;Ontology_term=GO:0006146,GO:0000034;end_range=5434,.;gbkey=CDS;go_function=adenine deaminase activity|0000034||IEA;go_process=adenine catabolic process|0006146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189005.1;locus_tag=LDO50_RS18485;partial=true;product=adenosine deaminase;protein_id=WP_224020003.1;transl_table=11 NZ_CAJZAO010000228.1 RefSeq gene 5506 5714 . + . ID=gene-LDO50_RS18490;Name=LDO50_RS18490;end_range=5714,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18490;partial=true NZ_CAJZAO010000228.1 GeneMarkS-2+ CDS 5506 5714 . + 0 ID=cds-WP_372586105.1;Parent=gene-LDO50_RS18490;Dbxref=GenBank:WP_372586105.1;Name=WP_372586105.1;end_range=5714,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS18490;partial=true;product=hypothetical protein;protein_id=WP_372586105.1;transl_table=11 ##sequence-region NZ_CAJZAO010000229.1 1 5375 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000229.1 RefSeq region 1 5375 . + . ID=NZ_CAJZAO010000229.1:1..5375;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_304 NZ_CAJZAO010000229.1 RefSeq gene 1 453 . + . ID=gene-LDO50_RS18495;Name=LDO50_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18495;old_locus_tag=BVI1335_3040001;partial=true;start_range=.,1 NZ_CAJZAO010000229.1 Protein Homology CDS 1 453 . + 0 ID=cds-WP_224020004.1;Parent=gene-LDO50_RS18495;Dbxref=GenBank:WP_224020004.1;Name=WP_224020004.1;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367037.1;locus_tag=LDO50_RS18495;partial=true;product=HAD-IC family P-type ATPase;protein_id=WP_224020004.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000229.1 RefSeq gene 510 746 . - . ID=gene-LDO50_RS18500;Name=LDO50_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18500;old_locus_tag=BVI1335_3040002 NZ_CAJZAO010000229.1 Protein Homology CDS 510 746 . - 0 ID=cds-WP_046425009.1;Parent=gene-LDO50_RS18500;Dbxref=GenBank:WP_046425009.1;Name=WP_046425009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659774.1;locus_tag=LDO50_RS18500;product=hypothetical protein;protein_id=WP_046425009.1;transl_table=11 NZ_CAJZAO010000229.1 RefSeq gene 896 1375 . - . ID=gene-LDO50_RS18505;Name=LDO50_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18505;old_locus_tag=BVI1335_3040004 NZ_CAJZAO010000229.1 Protein Homology CDS 896 1375 . - 0 ID=cds-WP_059738894.1;Parent=gene-LDO50_RS18505;Dbxref=GenBank:WP_059738894.1;Name=WP_059738894.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339252.1;locus_tag=LDO50_RS18505;product=GNAT family N-acetyltransferase;protein_id=WP_059738894.1;transl_table=11 NZ_CAJZAO010000229.1 RefSeq gene 1551 1706 . - . ID=gene-LDO50_RS18510;Name=LDO50_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18510;old_locus_tag=BVI1335_3040005 NZ_CAJZAO010000229.1 Protein Homology CDS 1551 1706 . - 0 ID=cds-WP_011881014.1;Parent=gene-LDO50_RS18510;Dbxref=GenBank:WP_011881014.1;Name=WP_011881014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187391.1;locus_tag=LDO50_RS18510;product=hypothetical protein;protein_id=WP_011881014.1;transl_table=11 NZ_CAJZAO010000229.1 RefSeq gene 1882 3504 . - . ID=gene-LDO50_RS18515;Name=LDO50_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18515;old_locus_tag=BVI1335_3040006 NZ_CAJZAO010000229.1 Protein Homology CDS 1882 3504 . - 0 ID=cds-WP_081059443.1;Parent=gene-LDO50_RS18515;Dbxref=GenBank:WP_081059443.1;Name=WP_081059443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724156.1;locus_tag=LDO50_RS18515;product=flagellar hook-length control protein FliK;protein_id=WP_081059443.1;transl_table=11 NZ_CAJZAO010000229.1 RefSeq gene 3551 4246 . - . ID=gene-LDO50_RS18520;Name=LDO50_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18520;old_locus_tag=BVI1335_3040007 NZ_CAJZAO010000229.1 Protein Homology CDS 3551 4246 . - 0 ID=cds-WP_011881016.1;Parent=gene-LDO50_RS18520;Dbxref=GenBank:WP_011881016.1;Name=WP_011881016.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331058.1;locus_tag=LDO50_RS18520;product=MgtC/SapB family protein;protein_id=WP_011881016.1;transl_table=11 NZ_CAJZAO010000229.1 RefSeq gene 4362 4969 . + . ID=gene-LDO50_RS31760;Name=LDO50_RS31760;end_range=4969,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31760;partial=true NZ_CAJZAO010000229.1 Protein Homology CDS 4362 4969 . + 0 ID=cds-WP_443797811.1;Parent=gene-LDO50_RS31760;Dbxref=GenBank:WP_443797811.1;Name=WP_443797811.1;Ontology_term=GO:0016853;end_range=4969,.;gbkey=CDS;go_function=isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353773.1;locus_tag=LDO50_RS31760;partial=true;product=AGE family epimerase/isomerase;protein_id=WP_443797811.1;transl_table=11 NZ_CAJZAO010000229.1 RefSeq gene 4980 5375 . + . ID=gene-LDO50_RS31765;Name=LDO50_RS31765;end_range=5375,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31765;partial=true;start_range=.,4980 NZ_CAJZAO010000229.1 Protein Homology CDS 4980 5375 . + 1 ID=cds-WP_443797812.1;Parent=gene-LDO50_RS31765;Dbxref=GenBank:WP_443797812.1;Name=WP_443797812.1;Ontology_term=GO:0016853;end_range=5375,.;gbkey=CDS;go_function=isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397389.1;locus_tag=LDO50_RS31765;partial=true;product=AGE family epimerase/isomerase;protein_id=WP_443797812.1;start_range=.,4980;transl_table=11 ##sequence-region NZ_CAJZAO010000230.1 1 579 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000230.1 RefSeq region 1 579 . + . ID=NZ_CAJZAO010000230.1:1..579;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_305 NZ_CAJZAO010000230.1 RefSeq gene 1 579 . + . ID=gene-LDO50_RS18530;Name=LDO50_RS18530;end_range=579,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18530;partial=true;start_range=.,1 NZ_CAJZAO010000230.1 Protein Homology CDS 1 579 . + 0 ID=cds-WP_224020005.1;Parent=gene-LDO50_RS18530;Dbxref=GenBank:WP_224020005.1;Name=WP_224020005.1;Ontology_term=GO:0007165,GO:0016020;end_range=579,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004536564.1;locus_tag=LDO50_RS18530;partial=true;product=methyl-accepting chemotaxis protein;protein_id=WP_224020005.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAO010000231.1 1 1291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000231.1 RefSeq region 1 1291 . + . ID=NZ_CAJZAO010000231.1:1..1291;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_306 NZ_CAJZAO010000231.1 RefSeq pseudogene 847 940 . + . ID=gene-LDO50_RS31770;Name=LDO50_RS31770;end_range=940,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31770;partial=true;pseudo=true NZ_CAJZAO010000231.1 Protein Homology CDS 847 940 . + 0 ID=cds-LDO50_RS31770;Parent=gene-LDO50_RS31770;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=940,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028984.1;locus_tag=LDO50_RS31770;partial=true;product=proline racemase family protein;pseudo=true;transl_table=11 NZ_CAJZAO010000231.1 RefSeq gene 951 1291 . + . ID=gene-LDO50_RS18535;Name=LDO50_RS18535;end_range=1291,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18535;partial=true;start_range=.,951 NZ_CAJZAO010000231.1 Protein Homology CDS 951 1291 . + 2 ID=cds-WP_443797813.1;Parent=gene-LDO50_RS18535;Dbxref=GenBank:WP_443797813.1;Name=WP_443797813.1;end_range=1291,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028984.1;locus_tag=LDO50_RS18535;partial=true;product=proline racemase family protein;protein_id=WP_443797813.1;start_range=.,951;transl_table=11 ##sequence-region NZ_CAJZAO010000232.1 1 461 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000232.1 RefSeq region 1 461 . + . ID=NZ_CAJZAO010000232.1:1..461;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_307 NZ_CAJZAO010000232.1 RefSeq pseudogene 1 267 . - . ID=gene-LDO50_RS18540;Name=LDO50_RS18540;end_range=267,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS18540;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000232.1 Protein Homology CDS 1 267 . - 0 ID=cds-LDO50_RS18540;Parent=gene-LDO50_RS18540;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=267,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195868.1;locus_tag=LDO50_RS18540;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000232.1 RefSeq gene 278 461 . + . ID=gene-LDO50_RS31775;Name=LDO50_RS31775;end_range=461,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31775;partial=true;start_range=.,278 NZ_CAJZAO010000232.1 GeneMarkS-2+ CDS 278 461 . + 2 ID=cds-WP_443797814.1;Parent=gene-LDO50_RS31775;Dbxref=GenBank:WP_443797814.1;Name=WP_443797814.1;end_range=461,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS31775;partial=true;product=hypothetical protein;protein_id=WP_443797814.1;start_range=.,278;transl_table=11 ##sequence-region NZ_CAJZAO010000233.1 1 1192 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000233.1 RefSeq region 1 1192 . + . ID=NZ_CAJZAO010000233.1:1..1192;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_308 NZ_CAJZAO010000233.1 RefSeq gene 27 992 . - . ID=gene-LDO50_RS18545;Name=LDO50_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18545;old_locus_tag=BVI1335_3080001 NZ_CAJZAO010000233.1 Protein Homology CDS 27 992 . - 0 ID=cds-WP_110421393.1;Parent=gene-LDO50_RS18545;Dbxref=GenBank:WP_110421393.1;Name=WP_110421393.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476181.1;locus_tag=LDO50_RS18545;product=IS110 family transposase;protein_id=WP_110421393.1;transl_table=11 ##sequence-region NZ_CAJZAO010000234.1 1 3098 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000234.1 RefSeq region 1 3098 . + . ID=NZ_CAJZAO010000234.1:1..3098;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_309 NZ_CAJZAO010000234.1 RefSeq pseudogene 1 164 . - . ID=gene-LDO50_RS31780;Name=LDO50_RS31780;end_range=164,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31780;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000234.1 Protein Homology CDS 1 164 . - 1 ID=cds-LDO50_RS31780;Parent=gene-LDO50_RS31780;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=164,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883925.1;locus_tag=LDO50_RS31780;partial=true;product=molybdopterin molybdenumtransferase MoeA;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000234.1 RefSeq pseudogene 175 314 . - . ID=gene-LDO50_RS31785;Name=LDO50_RS31785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31785;old_locus_tag=BVI1335_3090002;partial=true;pseudo=true;start_range=.,175 NZ_CAJZAO010000234.1 Protein Homology CDS 175 314 . - 0 ID=cds-LDO50_RS31785;Parent=gene-LDO50_RS31785;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883925.1;locus_tag=LDO50_RS31785;partial=true;product=molybdopterin molybdenumtransferase MoeA;pseudo=true;start_range=.,175;transl_table=11 NZ_CAJZAO010000234.1 RefSeq gene 420 1037 . - . ID=gene-LDO50_RS18555;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=LDO50_RS18555;old_locus_tag=BVI1335_3090003 NZ_CAJZAO010000234.1 Protein Homology CDS 420 1037 . - 0 ID=cds-WP_224020006.1;Parent=gene-LDO50_RS18555;Dbxref=GenBank:WP_224020006.1;Name=WP_224020006.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488635.1;locus_tag=LDO50_RS18555;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_224020006.1;transl_table=11 NZ_CAJZAO010000234.1 RefSeq gene 1066 2178 . - . ID=gene-LDO50_RS18560;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=LDO50_RS18560;old_locus_tag=BVI1335_3090004 NZ_CAJZAO010000234.1 Protein Homology CDS 1066 2178 . - 0 ID=cds-WP_060121706.1;Parent=gene-LDO50_RS18560;Dbxref=GenBank:WP_060121706.1;Name=WP_060121706.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213801.1;locus_tag=LDO50_RS18560;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_060121706.1;transl_table=11 NZ_CAJZAO010000234.1 RefSeq pseudogene 2304 3098 . - . ID=gene-LDO50_RS18565;Name=LDO50_RS18565;end_range=3098,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS18565;old_locus_tag=BVI1335_3090005;partial=true;pseudo=true NZ_CAJZAO010000234.1 Protein Homology CDS 2304 3098 . - 0 ID=cds-LDO50_RS18565;Parent=gene-LDO50_RS18565;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3098,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544929.1;locus_tag=LDO50_RS18565;partial=true;product=ribonuclease E/G;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000235.1 1 36307 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000235.1 RefSeq region 1 36307 . + . ID=NZ_CAJZAO010000235.1:1..36307;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_31 NZ_CAJZAO010000235.1 RefSeq gene 1 85 . + . ID=gene-LDO50_RS31110;Name=LDO50_RS31110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31110;partial=true;start_range=.,1 NZ_CAJZAO010000235.1 Protein Homology CDS 1 85 . + 1 ID=cds-WP_372586106.1;Parent=gene-LDO50_RS31110;Dbxref=GenBank:WP_372586106.1;Name=WP_372586106.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407812.1;locus_tag=LDO50_RS31110;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_372586106.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 123 557 . - . ID=gene-LDO50_RS18575;Name=LDO50_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18575;old_locus_tag=BVI1335_310001 NZ_CAJZAO010000235.1 Protein Homology CDS 123 557 . - 0 ID=cds-WP_011884995.1;Parent=gene-LDO50_RS18575;Dbxref=GenBank:WP_011884995.1;Name=WP_011884995.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884995.1;locus_tag=LDO50_RS18575;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_011884995.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 541 1002 . - . ID=gene-LDO50_RS18580;Name=LDO50_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18580;old_locus_tag=BVI1335_310002 NZ_CAJZAO010000235.1 Protein Homology CDS 541 1002 . - 0 ID=cds-WP_011884996.1;Parent=gene-LDO50_RS18580;Dbxref=GenBank:WP_011884996.1;Name=WP_011884996.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484054.1;locus_tag=LDO50_RS18580;product=MerR family transcriptional regulator;protein_id=WP_011884996.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 1310 1912 . + . ID=gene-LDO50_RS18585;Name=LDO50_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18585;old_locus_tag=BVI1335_310004 NZ_CAJZAO010000235.1 Protein Homology CDS 1310 1912 . + 0 ID=cds-WP_011884997.1;Parent=gene-LDO50_RS18585;Dbxref=GenBank:WP_011884997.1;Name=WP_011884997.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407809.1;locus_tag=LDO50_RS18585;product=ComEA family DNA-binding protein;protein_id=WP_011884997.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 1988 2419 . + . ID=gene-LDO50_RS18590;Name=LDO50_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18590;old_locus_tag=BVI1335_310005 NZ_CAJZAO010000235.1 Protein Homology CDS 1988 2419 . + 0 ID=cds-WP_011884998.1;Parent=gene-LDO50_RS18590;Dbxref=GenBank:WP_011884998.1;Name=WP_011884998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332252.1;locus_tag=LDO50_RS18590;product=YidB family protein;protein_id=WP_011884998.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 2547 5144 . - . ID=gene-LDO50_RS18595;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=LDO50_RS18595;old_locus_tag=BVI1335_310006 NZ_CAJZAO010000235.1 Protein Homology CDS 2547 5144 . - 0 ID=cds-WP_059991404.1;Parent=gene-LDO50_RS18595;Dbxref=GenBank:WP_059991404.1;Name=WP_059991404.1;Ontology_term=GO:0009408,GO:0042026,GO:0005737;gbkey=CDS;gene=clpB;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890767.1;locus_tag=LDO50_RS18595;product=ATP-dependent chaperone ClpB;protein_id=WP_059991404.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 5299 5817 . - . ID=gene-LDO50_RS18600;Name=LDO50_RS18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18600;old_locus_tag=BVI1335_310007 NZ_CAJZAO010000235.1 Protein Homology CDS 5299 5817 . - 0 ID=cds-WP_059460800.1;Parent=gene-LDO50_RS18600;Dbxref=GenBank:WP_059460800.1;Name=WP_059460800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885000.1;locus_tag=LDO50_RS18600;product=Rrf2 family transcriptional regulator;protein_id=WP_059460800.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 6070 6642 . + . ID=gene-LDO50_RS18605;Name=LDO50_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18605;old_locus_tag=BVI1335_310008 NZ_CAJZAO010000235.1 Protein Homology CDS 6070 6642 . + 0 ID=cds-WP_059735608.1;Parent=gene-LDO50_RS18605;Dbxref=GenBank:WP_059735608.1;Name=WP_059735608.1;Ontology_term=GO:0005344,GO:0019825,GO:0020037,GO:0046872;gbkey=CDS;go_function=oxygen carrier activity|0005344||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723121.1;locus_tag=LDO50_RS18605;product=group III truncated hemoglobin;protein_id=WP_059735608.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 6702 7178 . - . ID=gene-LDO50_RS18610;Name=LDO50_RS18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18610;old_locus_tag=BVI1335_310009 NZ_CAJZAO010000235.1 Protein Homology CDS 6702 7178 . - 0 ID=cds-WP_011885002.1;Parent=gene-LDO50_RS18610;Dbxref=GenBank:WP_011885002.1;Name=WP_011885002.1;Ontology_term=GO:0006777,GO:0030366;gbkey=CDS;go_function=molybdopterin synthase activity|0030366||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549662.1;locus_tag=LDO50_RS18610;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WP_011885002.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 7237 7494 . - . ID=gene-LDO50_RS18615;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=LDO50_RS18615;old_locus_tag=BVI1335_310010 NZ_CAJZAO010000235.1 Protein Homology CDS 7237 7494 . - 0 ID=cds-WP_011885003.1;Parent=gene-LDO50_RS18615;Dbxref=GenBank:WP_011885003.1;Name=WP_011885003.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaD;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115001.1;locus_tag=LDO50_RS18615;product=molybdopterin converting factor subunit 1;protein_id=WP_011885003.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 7513 8760 . - . ID=gene-LDO50_RS18620;Name=LDO50_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18620;old_locus_tag=BVI1335_310011 NZ_CAJZAO010000235.1 Protein Homology CDS 7513 8760 . - 0 ID=cds-WP_224020007.1;Parent=gene-LDO50_RS18620;Dbxref=GenBank:WP_224020007.1;Name=WP_224020007.1;Ontology_term=GO:0006777,GO:0046872,GO:0061599;gbkey=CDS;go_function=metal ion binding|0046872||IEA,molybdopterin molybdotransferase activity|0061599||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255166.1;locus_tag=LDO50_RS18620;product=molybdopterin molybdotransferase MoeA;protein_id=WP_224020007.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 9043 10494 . - . ID=gene-LDO50_RS18625;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=LDO50_RS18625;old_locus_tag=BVI1335_310012 NZ_CAJZAO010000235.1 Protein Homology CDS 9043 10494 . - 0 ID=cds-WP_034195394.1;Parent=gene-LDO50_RS18625;Dbxref=GenBank:WP_034195394.1;Name=WP_034195394.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896870.1;locus_tag=LDO50_RS18625;product=threonine synthase;protein_id=WP_034195394.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 10509 11837 . - . ID=gene-LDO50_RS18630;Name=LDO50_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18630;old_locus_tag=BVI1335_310013 NZ_CAJZAO010000235.1 Protein Homology CDS 10509 11837 . - 0 ID=cds-WP_059562163.1;Parent=gene-LDO50_RS18630;Dbxref=GenBank:WP_059562163.1;Name=WP_059562163.1;Ontology_term=GO:0006520,GO:0004412;gbkey=CDS;go_function=homoserine dehydrogenase activity|0004412||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482858.1;locus_tag=LDO50_RS18630;product=homoserine dehydrogenase;protein_id=WP_059562163.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 11891 13129 . - . ID=gene-LDO50_RS18635;Name=LDO50_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18635;old_locus_tag=BVI1335_310014 NZ_CAJZAO010000235.1 Protein Homology CDS 11891 13129 . - 0 ID=cds-WP_011885007.1;Parent=gene-LDO50_RS18635;Dbxref=GenBank:WP_011885007.1;Name=WP_011885007.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758358.1;locus_tag=LDO50_RS18635;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_011885007.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 13446 13820 . + . ID=gene-LDO50_RS18640;Name=LDO50_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18640;old_locus_tag=BVI1335_310015 NZ_CAJZAO010000235.1 Protein Homology CDS 13446 13820 . + 0 ID=cds-WP_014723124.1;Parent=gene-LDO50_RS18640;Dbxref=GenBank:WP_014723124.1;Name=WP_014723124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496387.1;locus_tag=LDO50_RS18640;product=Mth938-like domain-containing protein;protein_id=WP_014723124.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 13957 15633 . + . ID=gene-LDO50_RS18645;Name=LDO50_RS18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18645;old_locus_tag=BVI1335_310016 NZ_CAJZAO010000235.1 Protein Homology CDS 13957 15633 . + 0 ID=cds-WP_034195392.1;Parent=gene-LDO50_RS18645;Dbxref=GenBank:WP_034195392.1;Name=WP_034195392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364027.1;locus_tag=LDO50_RS18645;product=glycosyltransferase family 39 protein;protein_id=WP_034195392.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 15647 16018 . + . ID=gene-LDO50_RS18650;Name=LDO50_RS18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18650;old_locus_tag=BVI1335_310017 NZ_CAJZAO010000235.1 Protein Homology CDS 15647 16018 . + 0 ID=cds-WP_011352303.1;Parent=gene-LDO50_RS18650;Dbxref=GenBank:WP_011352303.1;Name=WP_011352303.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482863.1;locus_tag=LDO50_RS18650;product=EamA family transporter;protein_id=WP_011352303.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 16177 17328 . + . ID=gene-LDO50_RS18655;Name=LDO50_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18655;old_locus_tag=BVI1335_310018 NZ_CAJZAO010000235.1 Protein Homology CDS 16177 17328 . + 0 ID=cds-WP_045579044.1;Parent=gene-LDO50_RS18655;Dbxref=GenBank:WP_045579044.1;Name=WP_045579044.1;Ontology_term=GO:0008483;gbkey=CDS;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192765.1;locus_tag=LDO50_RS18655;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_045579044.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 17335 18357 . + . ID=gene-LDO50_RS18660;Name=LDO50_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18660;old_locus_tag=BVI1335_310019 NZ_CAJZAO010000235.1 Protein Homology CDS 17335 18357 . + 0 ID=cds-WP_046426117.1;Parent=gene-LDO50_RS18660;Dbxref=GenBank:WP_046426117.1;Name=WP_046426117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496384.1;locus_tag=LDO50_RS18660;product=glycosyltransferase;protein_id=WP_046426117.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 18354 19301 . + . ID=gene-LDO50_RS18665;Name=LDO50_RS18665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18665;old_locus_tag=BVI1335_310020 NZ_CAJZAO010000235.1 Protein Homology CDS 18354 19301 . + 0 ID=cds-WP_011885012.1;Parent=gene-LDO50_RS18665;Dbxref=GenBank:WP_011885012.1;Name=WP_011885012.1;Ontology_term=GO:0016742;gbkey=CDS;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004539650.1;locus_tag=LDO50_RS18665;product=formyltransferase;protein_id=WP_011885012.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 19298 20353 . + . ID=gene-LDO50_RS18670;Name=LDO50_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18670;old_locus_tag=BVI1335_310021 NZ_CAJZAO010000235.1 Protein Homology CDS 19298 20353 . + 0 ID=cds-WP_011885013.1;Parent=gene-LDO50_RS18670;Dbxref=GenBank:WP_011885013.1;Name=WP_011885013.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698287.1;locus_tag=LDO50_RS18670;product=bifunctional UDP-4-keto-pentose/UDP-xylose synthase;protein_id=WP_011885013.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 20366 21262 . + . ID=gene-LDO50_RS18675;Name=LDO50_RS18675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18675;old_locus_tag=BVI1335_310022 NZ_CAJZAO010000235.1 Protein Homology CDS 20366 21262 . + 0 ID=cds-WP_011885014.1;Parent=gene-LDO50_RS18675;Dbxref=GenBank:WP_011885014.1;Name=WP_011885014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890738.1;locus_tag=LDO50_RS18675;product=polysaccharide deacetylase family protein;protein_id=WP_011885014.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 21396 21857 . + . ID=gene-LDO50_RS18680;Name=LDO50_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18680;old_locus_tag=BVI1335_310023 NZ_CAJZAO010000235.1 Protein Homology CDS 21396 21857 . + 0 ID=cds-WP_011885015.1;Parent=gene-LDO50_RS18680;Dbxref=GenBank:WP_011885015.1;Name=WP_011885015.1;Ontology_term=GO:0008379,GO:0051920;gbkey=CDS;go_function=thioredoxin peroxidase activity|0008379||IEA,peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549652.1;locus_tag=LDO50_RS18680;product=peroxiredoxin;protein_id=WP_011885015.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq pseudogene 22053 22294 . - . ID=gene-LDO50_RS31115;Name=LDO50_RS31115;end_range=22294,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31115;partial=true;pseudo=true;start_range=.,22053 NZ_CAJZAO010000235.1 Protein Homology CDS 22053 22294 . - 0 ID=cds-LDO50_RS31115;Parent=gene-LDO50_RS31115;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=22294,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026209.1;locus_tag=LDO50_RS31115;partial=true;product=hypothetical protein;pseudo=true;start_range=.,22053;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 22190 24007 . + . ID=gene-LDO50_RS18685;Name=LDO50_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18685;old_locus_tag=BVI1335_310024 NZ_CAJZAO010000235.1 Protein Homology CDS 22190 24007 . + 0 ID=cds-WP_011885016.1;Parent=gene-LDO50_RS18685;Dbxref=GenBank:WP_011885016.1;Name=WP_011885016.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694301.1;locus_tag=LDO50_RS18685;product=PhoH family protein;protein_id=WP_011885016.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 24241 25281 . + . ID=gene-LDO50_RS18690;Name=LDO50_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18690;old_locus_tag=BVI1335_310025 NZ_CAJZAO010000235.1 Protein Homology CDS 24241 25281 . + 0 ID=cds-WP_175949255.1;Parent=gene-LDO50_RS18690;Dbxref=GenBank:WP_175949255.1;Name=WP_175949255.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549650.1;locus_tag=LDO50_RS18690;product=C40 family peptidase;protein_id=WP_175949255.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 25386 26396 . - . ID=gene-LDO50_RS18695;Name=LDO50_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18695;old_locus_tag=BVI1335_310026 NZ_CAJZAO010000235.1 Protein Homology CDS 25386 26396 . - 0 ID=cds-WP_011885018.1;Parent=gene-LDO50_RS18695;Dbxref=GenBank:WP_011885018.1;Name=WP_011885018.1;Ontology_term=GO:0035435,GO:0005315,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193771.1;locus_tag=LDO50_RS18695;product=inorganic phosphate transporter;protein_id=WP_011885018.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 26407 27033 . - . ID=gene-LDO50_RS18700;Name=LDO50_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18700;old_locus_tag=BVI1335_310027 NZ_CAJZAO010000235.1 Protein Homology CDS 26407 27033 . - 0 ID=cds-WP_011885019.1;Parent=gene-LDO50_RS18700;Dbxref=GenBank:WP_011885019.1;Name=WP_011885019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698298.1;locus_tag=LDO50_RS18700;product=DUF47 domain-containing protein;protein_id=WP_011885019.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 27172 28554 . - . ID=gene-LDO50_RS18705;Name=LDO50_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18705;old_locus_tag=BVI1335_310028 NZ_CAJZAO010000235.1 Protein Homology CDS 27172 28554 . - 0 ID=cds-WP_011885020.1;Parent=gene-LDO50_RS18705;Dbxref=GenBank:WP_011885020.1;Name=WP_011885020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192724.1;locus_tag=LDO50_RS18705;product=replicative DNA helicase;protein_id=WP_011885020.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 28691 29143 . - . ID=gene-LDO50_RS18710;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=LDO50_RS18710;old_locus_tag=BVI1335_310029 NZ_CAJZAO010000235.1 Protein Homology CDS 28691 29143 . - 0 ID=cds-WP_011885021.1;Parent=gene-LDO50_RS18710;Dbxref=GenBank:WP_011885021.1;Name=WP_011885021.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402297.1;locus_tag=LDO50_RS18710;product=50S ribosomal protein L9;protein_id=WP_011885021.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 29171 29446 . - . ID=gene-LDO50_RS18715;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=LDO50_RS18715;old_locus_tag=BVI1335_310030 NZ_CAJZAO010000235.1 Protein Homology CDS 29171 29446 . - 0 ID=cds-WP_011885022.1;Parent=gene-LDO50_RS18715;Dbxref=GenBank:WP_011885022.1;Name=WP_011885022.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017776738.1;locus_tag=LDO50_RS18715;product=30S ribosomal protein S18;protein_id=WP_011885022.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 29451 29750 . - . ID=gene-LDO50_RS18720;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=LDO50_RS18720;old_locus_tag=BVI1335_310031 NZ_CAJZAO010000235.1 Protein Homology CDS 29451 29750 . - 0 ID=cds-WP_011885023.1;Parent=gene-LDO50_RS18720;Dbxref=GenBank:WP_011885023.1;Name=WP_011885023.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328667.1;locus_tag=LDO50_RS18720;product=primosomal replication protein N;protein_id=WP_011885023.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 29791 30165 . - . ID=gene-LDO50_RS18725;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=LDO50_RS18725;old_locus_tag=BVI1335_310032 NZ_CAJZAO010000235.1 Protein Homology CDS 29791 30165 . - 0 ID=cds-WP_006755436.1;Parent=gene-LDO50_RS18725;Dbxref=GenBank:WP_006755436.1;Name=WP_006755436.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010103105.1;locus_tag=LDO50_RS18725;product=30S ribosomal protein S6;protein_id=WP_006755436.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 30370 31281 . - . ID=gene-LDO50_RS18730;Name=LDO50_RS18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18730;old_locus_tag=BVI1335_310033 NZ_CAJZAO010000235.1 Protein Homology CDS 30370 31281 . - 0 ID=cds-WP_011885024.1;Parent=gene-LDO50_RS18730;Dbxref=GenBank:WP_011885024.1;Name=WP_011885024.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896849.1;locus_tag=LDO50_RS18730;product=LysR family transcriptional regulator;protein_id=WP_011885024.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 31485 33260 . + . ID=gene-LDO50_RS18735;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=LDO50_RS18735;old_locus_tag=BVI1335_310034 NZ_CAJZAO010000235.1 Protein Homology CDS 31485 33260 . + 0 ID=cds-WP_045579027.1;Parent=gene-LDO50_RS18735;Dbxref=GenBank:WP_045579027.1;Name=WP_045579027.1;Ontology_term=GO:0009436,GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;go_process=glyoxylate catabolic process|0009436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896848.1;locus_tag=LDO50_RS18735;product=glyoxylate carboligase;protein_id=WP_045579027.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 33305 34114 . + . ID=gene-LDO50_RS18740;Name=hyi;gbkey=Gene;gene=hyi;gene_biotype=protein_coding;locus_tag=LDO50_RS18740;old_locus_tag=BVI1335_310035 NZ_CAJZAO010000235.1 Protein Homology CDS 33305 34114 . + 0 ID=cds-WP_045579026.1;Parent=gene-LDO50_RS18740;Dbxref=GenBank:WP_045579026.1;Name=WP_045579026.1;gbkey=CDS;gene=hyi;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352319.1;locus_tag=LDO50_RS18740;product=hydroxypyruvate isomerase;protein_id=WP_045579026.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq pseudogene 34140 35048 . + . ID=gene-LDO50_RS18745;Name=LDO50_RS18745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS18745;old_locus_tag=BVI1335_310036;partial=true;pseudo=true;start_range=.,34140 NZ_CAJZAO010000235.1 Protein Homology CDS 34140 35048 . + 0 ID=cds-LDO50_RS18745;Parent=gene-LDO50_RS18745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019580,GO:0008679;gbkey=CDS;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=galactarate metabolic process|0019580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896847.1;locus_tag=LDO50_RS18745;partial=true;product=2-hydroxy-3-oxopropionate reductase;pseudo=true;start_range=.,34140;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 35390 35512 . + . ID=gene-LDO50_RS30860;Name=LDO50_RS30860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30860 NZ_CAJZAO010000235.1 GeneMarkS-2+ CDS 35390 35512 . + 0 ID=cds-WP_014723130.1;Parent=gene-LDO50_RS30860;Dbxref=GenBank:WP_014723130.1;Name=WP_014723130.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS30860;product=hypothetical protein;protein_id=WP_014723130.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq gene 35524 35994 . + . ID=gene-LDO50_RS18750;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=LDO50_RS18750;old_locus_tag=BVI1335_310037 NZ_CAJZAO010000235.1 Protein Homology CDS 35524 35994 . + 0 ID=cds-WP_014723131.1;Parent=gene-LDO50_RS18750;Dbxref=GenBank:WP_014723131.1;Name=WP_014723131.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890694.1;locus_tag=LDO50_RS18750;product=peptidoglycan-binding protein LysM;protein_id=WP_014723131.1;transl_table=11 NZ_CAJZAO010000235.1 RefSeq pseudogene 36087 36307 . - . ID=gene-LDO50_RS18755;Name=LDO50_RS18755;end_range=36307,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS18755;old_locus_tag=BVI1335_310038;partial=true;pseudo=true NZ_CAJZAO010000235.1 Protein Homology CDS 36087 36307 . - 2 ID=cds-LDO50_RS18755;Parent=gene-LDO50_RS18755;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=36307,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755059.1;locus_tag=LDO50_RS18755;partial=true;product=L-asparaginase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000236.1 1 2358 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000236.1 RefSeq region 1 2358 . + . ID=NZ_CAJZAO010000236.1:1..2358;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_310 NZ_CAJZAO010000236.1 RefSeq gene 1 882 . + . ID=gene-LDO50_RS18760;Name=LDO50_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18760;old_locus_tag=BVI1335_3100001;partial=true;start_range=.,1 NZ_CAJZAO010000236.1 Protein Homology CDS 1 882 . + 0 ID=cds-WP_224020009.1;Parent=gene-LDO50_RS18760;Dbxref=GenBank:WP_224020009.1;Name=WP_224020009.1;Ontology_term=GO:0015031,GO:0015252,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=proton channel activity|0015252||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725281.1;locus_tag=LDO50_RS18760;partial=true;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_224020009.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000236.1 RefSeq gene 902 1312 . + . ID=gene-LDO50_RS18765;Name=LDO50_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18765;old_locus_tag=BVI1335_3100002 NZ_CAJZAO010000236.1 Protein Homology CDS 902 1312 . + 0 ID=cds-WP_014725280.1;Parent=gene-LDO50_RS18765;Dbxref=GenBank:WP_014725280.1;Name=WP_014725280.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354695.1;locus_tag=LDO50_RS18765;product=ExbD/TolR family protein;protein_id=WP_014725280.1;transl_table=11 NZ_CAJZAO010000236.1 RefSeq gene 1317 1911 . + . ID=gene-LDO50_RS31790;Name=LDO50_RS31790;end_range=1911,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31790;old_locus_tag=BVI1335_3100003;partial=true NZ_CAJZAO010000236.1 Protein Homology CDS 1317 1911 . + 0 ID=cds-WP_443797815.1;Parent=gene-LDO50_RS31790;Dbxref=GenBank:WP_443797815.1;Name=WP_443797815.1;end_range=1911,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009916439.1;locus_tag=LDO50_RS31790;partial=true;product=energy transducer TonB;protein_id=WP_443797815.1;transl_table=11 NZ_CAJZAO010000236.1 RefSeq gene 2076 2358 . + . ID=gene-LDO50_RS31795;Name=LDO50_RS31795;end_range=2358,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31795;partial=true NZ_CAJZAO010000236.1 Protein Homology CDS 2076 2358 . + 0 ID=cds-WP_443797816.1;Parent=gene-LDO50_RS31795;Dbxref=GenBank:WP_443797816.1;Name=WP_443797816.1;end_range=2358,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882505.1;locus_tag=LDO50_RS31795;partial=true;product=putative porin;protein_id=WP_443797816.1;transl_table=11 ##sequence-region NZ_CAJZAO010000237.1 1 3667 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000237.1 RefSeq region 1 3667 . + . ID=NZ_CAJZAO010000237.1:1..3667;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_311 NZ_CAJZAO010000237.1 RefSeq gene 1 2554 . - . ID=gene-LDO50_RS18775;Name=LDO50_RS18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18775;partial=true;start_range=.,1 NZ_CAJZAO010000237.1 Protein Homology CDS 1 2554 . - 0 ID=cds-WP_224020011.1;Parent=gene-LDO50_RS18775;Dbxref=GenBank:WP_224020011.1;Name=WP_224020011.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895981.1;locus_tag=LDO50_RS18775;partial=true;product=error-prone DNA polymerase;protein_id=WP_224020011.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000237.1 RefSeq pseudogene 2561 2913 . - . ID=gene-LDO50_RS31800;Name=LDO50_RS31800;end_range=2913,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31800;partial=true;pseudo=true NZ_CAJZAO010000237.1 Protein Homology CDS 2561 2913 . - 2 ID=cds-LDO50_RS31800;Parent=gene-LDO50_RS31800;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2913,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723686.1;locus_tag=LDO50_RS31800;partial=true;product=DNA polymerase Y family protein;pseudo=true;transl_table=11 NZ_CAJZAO010000237.1 RefSeq gene 2924 3667 . - . ID=gene-LDO50_RS18780;Name=LDO50_RS18780;end_range=3667,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18780;old_locus_tag=BVI1335_3110003;partial=true;start_range=.,2924 NZ_CAJZAO010000237.1 Protein Homology CDS 2924 3667 . - 0 ID=cds-WP_443797817.1;Parent=gene-LDO50_RS18780;Dbxref=GenBank:WP_443797817.1;Name=WP_443797817.1;Ontology_term=GO:0006260,GO:0006281,GO:0003684,GO:0003887,GO:0046872;end_range=3667,.;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA,metal ion binding|0046872||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011807615.1;locus_tag=LDO50_RS18780;partial=true;product=Y-family DNA polymerase;protein_id=WP_443797817.1;start_range=.,2924;transl_table=11 ##sequence-region NZ_CAJZAO010000238.1 1 810 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000238.1 RefSeq region 1 810 . + . ID=NZ_CAJZAO010000238.1:1..810;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_312 NZ_CAJZAO010000238.1 RefSeq gene 1 541 . - . ID=gene-LDO50_RS18785;Name=ku;end_range=541,.;gbkey=Gene;gene=ku;gene_biotype=protein_coding;locus_tag=LDO50_RS18785;partial=true;start_range=.,1 NZ_CAJZAO010000238.1 Protein Homology CDS 1 541 . - 0 ID=cds-WP_443797818.1;Parent=gene-LDO50_RS18785;Dbxref=GenBank:WP_443797818.1;Name=WP_443797818.1;Ontology_term=GO:0006303,GO:0045027;end_range=541,.;gbkey=CDS;gene=ku;go_function=DNA end binding|0045027||IEA;go_process=double-strand break repair via nonhomologous end joining|0006303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697268.1;locus_tag=LDO50_RS18785;partial=true;product=non-homologous end joining protein Ku;protein_id=WP_443797818.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000238.1 RefSeq gene 552 758 . - . ID=gene-LDO50_RS31805;Name=LDO50_RS31805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31805;old_locus_tag=BVI1335_3120003;partial=true;start_range=.,552 NZ_CAJZAO010000238.1 Protein Homology CDS 552 758 . - 0 ID=cds-WP_443797819.1;Parent=gene-LDO50_RS31805;Dbxref=GenBank:WP_443797819.1;Name=WP_443797819.1;Ontology_term=GO:0006303,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=double-strand break repair via nonhomologous end joining|0006303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336620.1;locus_tag=LDO50_RS31805;partial=true;product=Ku protein;protein_id=WP_443797819.1;start_range=.,552;transl_table=11 ##sequence-region NZ_CAJZAO010000239.1 1 1946 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000239.1 RefSeq region 1 1946 . + . ID=NZ_CAJZAO010000239.1:1..1946;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_313 NZ_CAJZAO010000239.1 RefSeq pseudogene 1 396 . - . ID=gene-LDO50_RS18790;Name=LDO50_RS18790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS18790;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000239.1 Protein Homology CDS 1 396 . - 0 ID=cds-LDO50_RS18790;Parent=gene-LDO50_RS18790;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882513.1;locus_tag=LDO50_RS18790;partial=true;product=type II toxin-antitoxin system Phd/YefM family antitoxin;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000239.1 RefSeq gene 952 1206 . - . ID=gene-LDO50_RS18795;Name=LDO50_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18795;old_locus_tag=BVI1335_3130004 NZ_CAJZAO010000239.1 Protein Homology CDS 952 1206 . - 0 ID=cds-WP_045577861.1;Parent=gene-LDO50_RS18795;Dbxref=GenBank:WP_045577861.1;Name=WP_045577861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725288.1;locus_tag=LDO50_RS18795;product=FecR/PupR family sigma factor regulator;protein_id=WP_045577861.1;transl_table=11 NZ_CAJZAO010000239.1 RefSeq gene 1468 1946 . - . ID=gene-LDO50_RS18800;Name=LDO50_RS18800;end_range=1946,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18800;old_locus_tag=BVI1335_3130005;partial=true NZ_CAJZAO010000239.1 Protein Homology CDS 1468 1946 . - 2 ID=cds-WP_372586107.1;Parent=gene-LDO50_RS18800;Dbxref=GenBank:WP_372586107.1;Name=WP_372586107.1;Ontology_term=GO:0016020;end_range=1946,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882515.1;locus_tag=LDO50_RS18800;partial=true;product=FecR family protein;protein_id=WP_372586107.1;transl_table=11 ##sequence-region NZ_CAJZAO010000240.1 1 4600 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000240.1 RefSeq region 1 4600 . + . ID=NZ_CAJZAO010000240.1:1..4600;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_314 NZ_CAJZAO010000240.1 RefSeq gene 1 1092 . + . ID=gene-LDO50_RS18805;Name=LDO50_RS18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18805;old_locus_tag=BVI1335_3140001;partial=true;start_range=.,1 NZ_CAJZAO010000240.1 Protein Homology CDS 1 1092 . + 0 ID=cds-WP_224020012.1;Parent=gene-LDO50_RS18805;Dbxref=GenBank:WP_224020012.1;Name=WP_224020012.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754884.1;locus_tag=LDO50_RS18805;partial=true;product=aldehyde dehydrogenase family protein;protein_id=WP_224020012.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000240.1 RefSeq gene 1085 2107 . + . ID=gene-LDO50_RS18810;Name=LDO50_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18810;old_locus_tag=BVI1335_3140002 NZ_CAJZAO010000240.1 Protein Homology CDS 1085 2107 . + 0 ID=cds-WP_034193846.1;Parent=gene-LDO50_RS18810;Dbxref=GenBank:WP_034193846.1;Name=WP_034193846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754883.1;locus_tag=LDO50_RS18810;product=Ldh family oxidoreductase;protein_id=WP_034193846.1;transl_table=11 NZ_CAJZAO010000240.1 RefSeq gene 2356 4215 . + . ID=gene-LDO50_RS18815;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=LDO50_RS18815;old_locus_tag=BVI1335_3140003 NZ_CAJZAO010000240.1 Protein Homology CDS 2356 4215 . + 0 ID=cds-WP_011881986.1;Parent=gene-LDO50_RS18815;Dbxref=GenBank:WP_011881986.1;Name=WP_011881986.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013952014.1;locus_tag=LDO50_RS18815;product=dihydroxy-acid dehydratase;protein_id=WP_011881986.1;transl_table=11 NZ_CAJZAO010000240.1 RefSeq pseudogene 4369 4600 . - . ID=gene-LDO50_RS18820;Name=LDO50_RS18820;end_range=4600,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS18820;partial=true;pseudo=true NZ_CAJZAO010000240.1 Protein Homology CDS 4369 4600 . - 1 ID=cds-LDO50_RS18820;Parent=gene-LDO50_RS18820;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4600,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725072.1;locus_tag=LDO50_RS18820;partial=true;product=SH3 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000241.1 1 5420 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000241.1 RefSeq region 1 5420 . + . ID=NZ_CAJZAO010000241.1:1..5420;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_315 NZ_CAJZAO010000241.1 RefSeq gene 1 317 . - . ID=gene-LDO50_RS31810;Name=LDO50_RS31810;end_range=317,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31810;partial=true;start_range=.,1 NZ_CAJZAO010000241.1 Protein Homology CDS 1 317 . - 2 ID=cds-WP_443797820.1;Parent=gene-LDO50_RS31810;Dbxref=GenBank:WP_443797820.1;Name=WP_443797820.1;end_range=317,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545375.1;locus_tag=LDO50_RS31810;partial=true;product=AMP-binding enzyme;protein_id=WP_443797820.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000241.1 RefSeq gene 328 692 . - . ID=gene-LDO50_RS31815;Name=LDO50_RS31815;end_range=692,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31815;old_locus_tag=BVI1335_3150002;partial=true;start_range=.,328 NZ_CAJZAO010000241.1 Protein Homology CDS 328 692 . - 0 ID=cds-WP_443797821.1;Parent=gene-LDO50_RS31815;Dbxref=GenBank:WP_443797821.1;Name=WP_443797821.1;end_range=692,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006499075.1;locus_tag=LDO50_RS31815;partial=true;product=AMP-binding protein;protein_id=WP_443797821.1;start_range=.,328;transl_table=11 NZ_CAJZAO010000241.1 RefSeq gene 703 1278 . - . ID=gene-LDO50_RS31820;Name=LDO50_RS31820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31820;old_locus_tag=BVI1335_3150003;partial=true;start_range=.,703 NZ_CAJZAO010000241.1 Protein Homology CDS 703 1278 . - 0 ID=cds-WP_443797822.1;Parent=gene-LDO50_RS31820;Dbxref=GenBank:WP_443797822.1;Name=WP_443797822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656825.1;locus_tag=LDO50_RS31820;partial=true;product=AMP-binding protein;protein_id=WP_443797822.1;start_range=.,703;transl_table=11 NZ_CAJZAO010000241.1 RefSeq gene 1591 3330 . + . ID=gene-LDO50_RS18830;Name=LDO50_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18830;old_locus_tag=BVI1335_3150004 NZ_CAJZAO010000241.1 Protein Homology CDS 1591 3330 . + 0 ID=cds-WP_045579124.1;Parent=gene-LDO50_RS18830;Dbxref=GenBank:WP_045579124.1;Name=WP_045579124.1;Ontology_term=GO:0015833,GO:0005524,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351939.1;locus_tag=LDO50_RS18830;product=cyclic peptide export ABC transporter;protein_id=WP_045579124.1;transl_table=11 NZ_CAJZAO010000241.1 RefSeq gene 3715 4767 . - . ID=gene-LDO50_RS18835;Name=LDO50_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18835;old_locus_tag=BVI1335_3150006 NZ_CAJZAO010000241.1 Protein Homology CDS 3715 4767 . - 0 ID=cds-WP_372586108.1;Parent=gene-LDO50_RS18835;Dbxref=GenBank:WP_372586108.1;Name=WP_372586108.1;Ontology_term=GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723010.1;locus_tag=LDO50_RS18835;product=ABC transporter substrate-binding protein;protein_id=WP_372586108.1;transl_table=11 NZ_CAJZAO010000241.1 RefSeq gene 4767 5420 . - . ID=gene-LDO50_RS18840;Name=fhuF;end_range=5420,.;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=LDO50_RS18840;old_locus_tag=BVI1335_3150007;partial=true NZ_CAJZAO010000241.1 Protein Homology CDS 4767 5420 . - 0 ID=cds-WP_224020013.1;Parent=gene-LDO50_RS18840;Dbxref=GenBank:WP_224020013.1;Name=WP_224020013.1;Ontology_term=GO:0033214,GO:0008199,GO:0016491,GO:0051537;end_range=5420,.;gbkey=CDS;gene=fhuF;go_function=ferric iron binding|0008199||IEA,oxidoreductase activity|0016491||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=siderophore-iron import into cell|0033214||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404841.1;locus_tag=LDO50_RS18840;partial=true;product=siderophore-iron reductase FhuF;protein_id=WP_224020013.1;transl_table=11 ##sequence-region NZ_CAJZAO010000242.1 1 4135 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000242.1 RefSeq region 1 4135 . + . ID=NZ_CAJZAO010000242.1:1..4135;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_316 NZ_CAJZAO010000242.1 RefSeq gene 92 1180 . + . ID=gene-LDO50_RS18845;Name=LDO50_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18845;old_locus_tag=BVI1335_3160002 NZ_CAJZAO010000242.1 Protein Homology CDS 92 1180 . + 0 ID=cds-WP_011884849.1;Parent=gene-LDO50_RS18845;Dbxref=GenBank:WP_011884849.1;Name=WP_011884849.1;Ontology_term=GO:0009236,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413271.1;locus_tag=LDO50_RS18845;product=cobalt-precorrin-5B (C(1))-methyltransferase;protein_id=WP_011884849.1;transl_table=11 NZ_CAJZAO010000242.1 RefSeq gene 1177 1917 . + . ID=gene-LDO50_RS18850;Name=LDO50_RS18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18850;old_locus_tag=BVI1335_3160001 NZ_CAJZAO010000242.1 Protein Homology CDS 1177 1917 . + 0 ID=cds-WP_224020015.1;Parent=gene-LDO50_RS18850;Dbxref=GenBank:WP_224020015.1;Name=WP_224020015.1;Ontology_term=GO:0009236,GO:0016994;gbkey=CDS;go_function=precorrin-6A reductase activity|0016994||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400061.1;locus_tag=LDO50_RS18850;product=cobalt-precorrin-6A reductase;protein_id=WP_224020015.1;transl_table=11 NZ_CAJZAO010000242.1 RefSeq gene 1936 2664 . + . ID=gene-LDO50_RS18855;Name=cobM;gbkey=Gene;gene=cobM;gene_biotype=protein_coding;locus_tag=LDO50_RS18855;old_locus_tag=BVI1335_3160003 NZ_CAJZAO010000242.1 Protein Homology CDS 1936 2664 . + 0 ID=cds-WP_059602740.1;Parent=gene-LDO50_RS18855;Dbxref=GenBank:WP_059602740.1;Name=WP_059602740.1;Ontology_term=GO:0009236,GO:0046026;gbkey=CDS;gene=cobM;go_function=precorrin-4 C11-methyltransferase activity|0046026||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213333.1;locus_tag=LDO50_RS18855;product=precorrin-4 C(11)-methyltransferase;protein_id=WP_059602740.1;transl_table=11 NZ_CAJZAO010000242.1 RefSeq gene 2726 3586 . + . ID=gene-LDO50_RS18860;Name=LDO50_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18860;old_locus_tag=BVI1335_3160004 NZ_CAJZAO010000242.1 Protein Homology CDS 2726 3586 . + 0 ID=cds-WP_224020016.1;Parent=gene-LDO50_RS18860;Dbxref=GenBank:WP_224020016.1;Name=WP_224020016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884861.1;locus_tag=LDO50_RS18860;product=hypothetical protein;protein_id=WP_224020016.1;transl_table=11 NZ_CAJZAO010000242.1 RefSeq gene 3664 4135 . - . ID=gene-LDO50_RS18865;Name=LDO50_RS18865;end_range=4135,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18865;old_locus_tag=BVI1335_3160005;partial=true NZ_CAJZAO010000242.1 Protein Homology CDS 3664 4135 . - 1 ID=cds-WP_224020017.1;Parent=gene-LDO50_RS18865;Dbxref=GenBank:WP_224020017.1;Name=WP_224020017.1;Ontology_term=GO:0055085,GO:0022857;end_range=4135,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004547355.1;locus_tag=LDO50_RS18865;partial=true;product=MFS transporter;protein_id=WP_224020017.1;transl_table=11 ##sequence-region NZ_CAJZAO010000243.1 1 1759 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000243.1 RefSeq region 1 1759 . + . ID=NZ_CAJZAO010000243.1:1..1759;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_317 NZ_CAJZAO010000243.1 RefSeq pseudogene 1 297 . - . ID=gene-LDO50_RS18870;Name=LDO50_RS18870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS18870;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000243.1 Protein Homology CDS 1 297 . - 0 ID=cds-LDO50_RS18870;Parent=gene-LDO50_RS18870;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880074.1;locus_tag=LDO50_RS18870;partial=true;product=carbamoyltransferase HypF;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000243.1 RefSeq gene 294 1334 . - . ID=gene-LDO50_RS18875;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=LDO50_RS18875;old_locus_tag=BVI1335_3170002 NZ_CAJZAO010000243.1 Protein Homology CDS 294 1334 . - 0 ID=cds-WP_224020018.1;Parent=gene-LDO50_RS18875;Dbxref=GenBank:WP_224020018.1;Name=WP_224020018.1;Ontology_term=GO:0036211,GO:0051604,GO:0000166,GO:0003924,GO:0016151,GO:0016530;gbkey=CDS;gene=hypB;go_function=nucleotide binding|0000166||IEA,GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA,metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725817.1;locus_tag=LDO50_RS18875;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_224020018.1;transl_table=11 NZ_CAJZAO010000243.1 RefSeq gene 1364 1711 . - . ID=gene-LDO50_RS18880;Name=LDO50_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18880;old_locus_tag=BVI1335_3170003 NZ_CAJZAO010000243.1 Protein Homology CDS 1364 1711 . - 0 ID=cds-WP_059720298.1;Parent=gene-LDO50_RS18880;Dbxref=GenBank:WP_059720298.1;Name=WP_059720298.1;Ontology_term=GO:0051604,GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880072.1;locus_tag=LDO50_RS18880;product=hydrogenase maturation nickel metallochaperone HypA/HybF;protein_id=WP_059720298.1;transl_table=11 ##sequence-region NZ_CAJZAO010000244.1 1 2092 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000244.1 RefSeq region 1 2092 . + . ID=NZ_CAJZAO010000244.1:1..2092;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_318 NZ_CAJZAO010000244.1 RefSeq pseudogene 1 254 . + . ID=gene-LDO50_RS18885;Name=LDO50_RS18885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS18885;old_locus_tag=BVI1335_3180001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000244.1 Protein Homology CDS 1 254 . + 2 ID=cds-LDO50_RS18885;Parent=gene-LDO50_RS18885;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884845.1;locus_tag=LDO50_RS18885;partial=true;product=precorrin-3B synthase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000244.1 RefSeq gene 247 873 . + . ID=gene-LDO50_RS18890;Name=LDO50_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18890;old_locus_tag=BVI1335_3180002 NZ_CAJZAO010000244.1 Protein Homology CDS 247 873 . + 0 ID=cds-WP_014723034.1;Parent=gene-LDO50_RS18890;Dbxref=GenBank:WP_014723034.1;Name=WP_014723034.1;Ontology_term=GO:0009236,GO:0016993;gbkey=CDS;go_function=precorrin-8X methylmutase activity|0016993||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017778279.1;locus_tag=LDO50_RS18890;product=precorrin-8X methylmutase;protein_id=WP_014723034.1;transl_table=11 NZ_CAJZAO010000244.1 RefSeq gene 870 1604 . + . ID=gene-LDO50_RS18895;Name=LDO50_RS18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18895;old_locus_tag=BVI1335_3180003 NZ_CAJZAO010000244.1 Protein Homology CDS 870 1604 . + 0 ID=cds-WP_011884842.1;Parent=gene-LDO50_RS18895;Dbxref=GenBank:WP_011884842.1;Name=WP_011884842.1;Ontology_term=GO:0009236,GO:0030788;gbkey=CDS;go_function=precorrin-2 C20-methyltransferase activity|0030788||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601722.1;locus_tag=LDO50_RS18895;product=precorrin-2 C(20)-methyltransferase;protein_id=WP_011884842.1;transl_table=11 NZ_CAJZAO010000244.1 RefSeq pseudogene 1601 1929 . + . ID=gene-LDO50_RS18900;Name=LDO50_RS18900;end_range=1929,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS18900;partial=true;pseudo=true NZ_CAJZAO010000244.1 Protein Homology CDS 1601 1929 . + 0 ID=cds-LDO50_RS18900;Parent=gene-LDO50_RS18900;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1929,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884840.1;locus_tag=LDO50_RS18900;partial=true;product=cobalamin biosynthesis protein CbiG;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000245.1 1 871 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000245.1 RefSeq region 1 871 . + . ID=NZ_CAJZAO010000245.1:1..871;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_319 NZ_CAJZAO010000245.1 RefSeq gene 1 182 . + . ID=gene-LDO50_RS31825;Name=LDO50_RS31825;end_range=182,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31825;old_locus_tag=BVI1335_3190001;partial=true;start_range=.,1 NZ_CAJZAO010000245.1 Protein Homology CDS 1 182 . + 0 ID=cds-WP_443797823.1;Parent=gene-LDO50_RS31825;Dbxref=GenBank:WP_443797823.1;Name=WP_443797823.1;end_range=182,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189184.1;locus_tag=LDO50_RS31825;partial=true;product=fibronectin type III domain-containing protein;protein_id=WP_443797823.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000245.1 RefSeq gene 193 597 . + . ID=gene-LDO50_RS31830;Name=LDO50_RS31830;end_range=597,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31830;old_locus_tag=BVI1335_3190002;partial=true;start_range=.,193 NZ_CAJZAO010000245.1 Protein Homology CDS 193 597 . + 1 ID=cds-WP_443797825.1;Parent=gene-LDO50_RS31830;Dbxref=GenBank:WP_443797825.1;Name=WP_443797825.1;Ontology_term=GO:0016787;end_range=597,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189184.1;locus_tag=LDO50_RS31830;partial=true;product=metallophosphoesterase;protein_id=WP_443797825.1;start_range=.,193;transl_table=11 NZ_CAJZAO010000245.1 RefSeq gene 608 871 . + . ID=gene-LDO50_RS31835;Name=LDO50_RS31835;end_range=871,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31835;partial=true;start_range=.,608 NZ_CAJZAO010000245.1 Protein Homology CDS 608 871 . + 0 ID=cds-WP_443797824.1;Parent=gene-LDO50_RS31835;Dbxref=GenBank:WP_443797824.1;Name=WP_443797824.1;Ontology_term=GO:0016787;end_range=871,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189184.1;locus_tag=LDO50_RS31835;partial=true;product=metallophosphoesterase;protein_id=WP_443797824.1;start_range=.,608;transl_table=11 ##sequence-region NZ_CAJZAO010000246.1 1 105764 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000246.1 RefSeq region 1 105764 . + . ID=NZ_CAJZAO010000246.1:1..105764;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_32 NZ_CAJZAO010000246.1 RefSeq gene 571 969 . - . ID=gene-LDO50_RS18910;Name=LDO50_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18910;old_locus_tag=BVI1335_320003 NZ_CAJZAO010000246.1 Protein Homology CDS 571 969 . - 0 ID=cds-WP_011882595.1;Parent=gene-LDO50_RS18910;Dbxref=GenBank:WP_011882595.1;Name=WP_011882595.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754334.1;locus_tag=LDO50_RS18910;product=winged helix-turn-helix domain-containing protein;protein_id=WP_011882595.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 1332 3542 . - . ID=gene-LDO50_RS18915;Name=LDO50_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18915;old_locus_tag=BVI1335_320005 NZ_CAJZAO010000246.1 Protein Homology CDS 1332 3542 . - 0 ID=cds-WP_059562501.1;Parent=gene-LDO50_RS18915;Dbxref=GenBank:WP_059562501.1;Name=WP_059562501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659201.1;locus_tag=LDO50_RS18915;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;protein_id=WP_059562501.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 3545 4006 . - . ID=gene-LDO50_RS18920;Name=LDO50_RS18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18920;old_locus_tag=BVI1335_320006 NZ_CAJZAO010000246.1 Protein Homology CDS 3545 4006 . - 0 ID=cds-WP_059460938.1;Parent=gene-LDO50_RS18920;Dbxref=GenBank:WP_059460938.1;Name=WP_059460938.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017328867.1;locus_tag=LDO50_RS18920;product=(2Fe-2S)-binding protein;protein_id=WP_059460938.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 4186 5112 . + . ID=gene-LDO50_RS18925;Name=LDO50_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18925;old_locus_tag=BVI1335_320007 NZ_CAJZAO010000246.1 Protein Homology CDS 4186 5112 . + 0 ID=cds-WP_046423768.1;Parent=gene-LDO50_RS18925;Dbxref=GenBank:WP_046423768.1;Name=WP_046423768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659200.1;locus_tag=LDO50_RS18925;product=AraC family transcriptional regulator;protein_id=WP_046423768.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 5079 5543 . - . ID=gene-LDO50_RS18930;Name=LDO50_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18930 NZ_CAJZAO010000246.1 GeneMarkS-2+ CDS 5079 5543 . - 0 ID=cds-WP_131929104.1;Parent=gene-LDO50_RS18930;Dbxref=GenBank:WP_131929104.1;Name=WP_131929104.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS18930;product=hypothetical protein;protein_id=WP_131929104.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 6603 6896 . + . ID=gene-LDO50_RS18935;Name=LDO50_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18935;old_locus_tag=BVI1335_320008 NZ_CAJZAO010000246.1 Protein Homology CDS 6603 6896 . + 0 ID=cds-WP_080957616.1;Parent=gene-LDO50_RS18935;Dbxref=GenBank:WP_080957616.1;Name=WP_080957616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725389.1;locus_tag=LDO50_RS18935;product=hypothetical protein;protein_id=WP_080957616.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 7057 7383 . + . ID=gene-LDO50_RS18940;Name=LDO50_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18940;old_locus_tag=BVI1335_320011 NZ_CAJZAO010000246.1 Protein Homology CDS 7057 7383 . + 0 ID=cds-WP_011882588.1;Parent=gene-LDO50_RS18940;Dbxref=GenBank:WP_011882588.1;Name=WP_011882588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396622.1;locus_tag=LDO50_RS18940;product=hypothetical protein;protein_id=WP_011882588.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 7495 8085 . + . ID=gene-LDO50_RS18945;Name=LDO50_RS18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18945;old_locus_tag=BVI1335_320012 NZ_CAJZAO010000246.1 Protein Homology CDS 7495 8085 . + 0 ID=cds-WP_011882587.1;Parent=gene-LDO50_RS18945;Dbxref=GenBank:WP_011882587.1;Name=WP_011882587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725386.1;locus_tag=LDO50_RS18945;product=hypothetical protein;protein_id=WP_011882587.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 8160 8441 . + . ID=gene-LDO50_RS18950;Name=LDO50_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18950;old_locus_tag=BVI1335_320013 NZ_CAJZAO010000246.1 Protein Homology CDS 8160 8441 . + 0 ID=cds-WP_011882586.1;Parent=gene-LDO50_RS18950;Dbxref=GenBank:WP_011882586.1;Name=WP_011882586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882586.1;locus_tag=LDO50_RS18950;product=hypothetical protein;protein_id=WP_011882586.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 8486 10267 . + . ID=gene-LDO50_RS18955;Name=LDO50_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18955;old_locus_tag=BVI1335_320014 NZ_CAJZAO010000246.1 Protein Homology CDS 8486 10267 . + 0 ID=cds-WP_224020019.1;Parent=gene-LDO50_RS18955;Dbxref=GenBank:WP_224020019.1;Name=WP_224020019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725385.1;locus_tag=LDO50_RS18955;product=chemotaxis protein CheA;protein_id=WP_224020019.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 10419 11003 . + . ID=gene-LDO50_RS18960;Name=LDO50_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18960;old_locus_tag=BVI1335_320015 NZ_CAJZAO010000246.1 Protein Homology CDS 10419 11003 . + 0 ID=cds-WP_011882584.1;Parent=gene-LDO50_RS18960;Dbxref=GenBank:WP_011882584.1;Name=WP_011882584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480876.1;locus_tag=LDO50_RS18960;product=hypothetical protein;protein_id=WP_011882584.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 11148 12524 . + . ID=gene-LDO50_RS18965;Name=LDO50_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18965;old_locus_tag=BVI1335_320016 NZ_CAJZAO010000246.1 Protein Homology CDS 11148 12524 . + 0 ID=cds-WP_085954512.1;Parent=gene-LDO50_RS18965;Dbxref=GenBank:WP_085954512.1;Name=WP_085954512.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725384.1;locus_tag=LDO50_RS18965;product=sigma-54 dependent transcriptional regulator;protein_id=WP_085954512.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 12618 13109 . - . ID=gene-LDO50_RS18970;Name=LDO50_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18970;old_locus_tag=BVI1335_320017 NZ_CAJZAO010000246.1 Protein Homology CDS 12618 13109 . - 0 ID=cds-WP_011882582.1;Parent=gene-LDO50_RS18970;Dbxref=GenBank:WP_011882582.1;Name=WP_011882582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898793.1;locus_tag=LDO50_RS18970;product=hypothetical protein;protein_id=WP_011882582.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 13466 14167 . + . ID=gene-LDO50_RS18975;Name=LDO50_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18975;old_locus_tag=BVI1335_320018 NZ_CAJZAO010000246.1 Protein Homology CDS 13466 14167 . + 0 ID=cds-WP_034194297.1;Parent=gene-LDO50_RS18975;Dbxref=GenBank:WP_034194297.1;Name=WP_034194297.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480881.1;locus_tag=LDO50_RS18975;product=response regulator transcription factor;protein_id=WP_034194297.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 14572 16125 . - . ID=gene-LDO50_RS18980;Name=LDO50_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18980;old_locus_tag=BVI1335_320020 NZ_CAJZAO010000246.1 Protein Homology CDS 14572 16125 . - 0 ID=cds-WP_011882580.1;Parent=gene-LDO50_RS18980;Dbxref=GenBank:WP_011882580.1;Name=WP_011882580.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216630.1;locus_tag=LDO50_RS18980;product=methyl-accepting chemotaxis protein;protein_id=WP_011882580.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 16384 17322 . + . ID=gene-LDO50_RS18985;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=LDO50_RS18985;old_locus_tag=BVI1335_320021 NZ_CAJZAO010000246.1 Protein Homology CDS 16384 17322 . + 0 ID=cds-WP_224020020.1;Parent=gene-LDO50_RS18985;Dbxref=GenBank:WP_224020020.1;Name=WP_224020020.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216631.1;locus_tag=LDO50_RS18985;product=2-dehydropantoate 2-reductase;protein_id=WP_224020020.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 17369 17512 . - . ID=gene-LDO50_RS18990;Name=LDO50_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18990;old_locus_tag=BVI1335_320022 NZ_CAJZAO010000246.1 Protein Homology CDS 17369 17512 . - 0 ID=cds-WP_165487640.1;Parent=gene-LDO50_RS18990;Dbxref=GenBank:WP_165487640.1;Name=WP_165487640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752960.1;locus_tag=LDO50_RS18990;product=hypothetical protein;protein_id=WP_165487640.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 17681 18265 . - . ID=gene-LDO50_RS18995;Name=LDO50_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS18995;old_locus_tag=BVI1335_320023 NZ_CAJZAO010000246.1 Protein Homology CDS 17681 18265 . - 0 ID=cds-WP_046423779.1;Parent=gene-LDO50_RS18995;Dbxref=GenBank:WP_046423779.1;Name=WP_046423779.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396642.1;locus_tag=LDO50_RS18995;product=nucleotidyltransferase family protein;protein_id=WP_046423779.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 18591 19886 . - . ID=gene-LDO50_RS19000;Name=LDO50_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19000;old_locus_tag=BVI1335_320024 NZ_CAJZAO010000246.1 Protein Homology CDS 18591 19886 . - 0 ID=cds-WP_034194295.1;Parent=gene-LDO50_RS19000;Dbxref=GenBank:WP_034194295.1;Name=WP_034194295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254972.1;locus_tag=LDO50_RS19000;product=aspartate carbamoyltransferase;protein_id=WP_034194295.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 20100 20234 . + . ID=gene-LDO50_RS19005;Name=LDO50_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19005;old_locus_tag=BVI1335_320025 NZ_CAJZAO010000246.1 Protein Homology CDS 20100 20234 . + 0 ID=cds-WP_009688930.1;Parent=gene-LDO50_RS19005;Dbxref=GenBank:WP_009688930.1;Name=WP_009688930.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010109044.1;locus_tag=LDO50_RS19005;product=entericidin A/B family lipoprotein;protein_id=WP_009688930.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 20345 20893 . - . ID=gene-LDO50_RS19010;Name=LDO50_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19010;old_locus_tag=BVI1335_320026 NZ_CAJZAO010000246.1 Protein Homology CDS 20345 20893 . - 0 ID=cds-WP_034194326.1;Parent=gene-LDO50_RS19010;Dbxref=GenBank:WP_034194326.1;Name=WP_034194326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485834.1;locus_tag=LDO50_RS19010;product=hypothetical protein;protein_id=WP_034194326.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 21044 21985 . - . ID=gene-LDO50_RS19015;Name=LDO50_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19015;old_locus_tag=BVI1335_320027 NZ_CAJZAO010000246.1 Protein Homology CDS 21044 21985 . - 0 ID=cds-WP_034194325.1;Parent=gene-LDO50_RS19015;Dbxref=GenBank:WP_034194325.1;Name=WP_034194325.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216648.1;locus_tag=LDO50_RS19015;product=DMT family transporter;protein_id=WP_034194325.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 22356 23150 . - . ID=gene-LDO50_RS19020;Name=LDO50_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19020;old_locus_tag=BVI1335_320028 NZ_CAJZAO010000246.1 Protein Homology CDS 22356 23150 . - 0 ID=cds-WP_034194294.1;Parent=gene-LDO50_RS19020;Dbxref=GenBank:WP_034194294.1;Name=WP_034194294.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758098.1;locus_tag=LDO50_RS19020;product=AraC family transcriptional regulator;protein_id=WP_034194294.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 23459 23812 . + . ID=gene-LDO50_RS19025;Name=LDO50_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19025;old_locus_tag=BVI1335_320029 NZ_CAJZAO010000246.1 Protein Homology CDS 23459 23812 . + 0 ID=cds-WP_051974447.1;Parent=gene-LDO50_RS19025;Dbxref=GenBank:WP_051974447.1;Name=WP_051974447.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022164.6;locus_tag=LDO50_RS19025;product=MoaF N-terminal domain-containing protein;protein_id=WP_051974447.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 23790 24467 . - . ID=gene-LDO50_RS19030;Name=LDO50_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19030;old_locus_tag=BVI1335_320030 NZ_CAJZAO010000246.1 Protein Homology CDS 23790 24467 . - 0 ID=cds-WP_045577824.1;Parent=gene-LDO50_RS19030;Dbxref=GenBank:WP_045577824.1;Name=WP_045577824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547343.1;locus_tag=LDO50_RS19030;product=dihydrodipicolinate reductase C-terminal domain-containing protein;protein_id=WP_045577824.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 24790 25503 . + . ID=gene-LDO50_RS19035;Name=LDO50_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19035;old_locus_tag=BVI1335_320031 NZ_CAJZAO010000246.1 Protein Homology CDS 24790 25503 . + 0 ID=cds-WP_014725374.1;Parent=gene-LDO50_RS19035;Dbxref=GenBank:WP_014725374.1;Name=WP_014725374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758094.1;locus_tag=LDO50_RS19035;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_014725374.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 25678 25875 . + . ID=gene-LDO50_RS19040;Name=LDO50_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19040;old_locus_tag=BVI1335_320032 NZ_CAJZAO010000246.1 Protein Homology CDS 25678 25875 . + 0 ID=cds-WP_014725372.1;Parent=gene-LDO50_RS19040;Dbxref=GenBank:WP_014725372.1;Name=WP_014725372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725372.1;locus_tag=LDO50_RS19040;product=oxidoreductase-like domain-containing protein;protein_id=WP_014725372.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 25950 27416 . - . ID=gene-LDO50_RS19045;Name=LDO50_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19045;old_locus_tag=BVI1335_320033 NZ_CAJZAO010000246.1 Protein Homology CDS 25950 27416 . - 0 ID=cds-WP_224020021.1;Parent=gene-LDO50_RS19045;Dbxref=GenBank:WP_224020021.1;Name=WP_224020021.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496843.1;locus_tag=LDO50_RS19045;product=MFS transporter;protein_id=WP_224020021.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 27575 28447 . + . ID=gene-LDO50_RS19050;Name=LDO50_RS19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19050;old_locus_tag=BVI1335_320034 NZ_CAJZAO010000246.1 Protein Homology CDS 27575 28447 . + 0 ID=cds-WP_011882568.1;Parent=gene-LDO50_RS19050;Dbxref=GenBank:WP_011882568.1;Name=WP_011882568.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898832.1;locus_tag=LDO50_RS19050;product=LysR family transcriptional regulator;protein_id=WP_011882568.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 28752 29651 . - . ID=gene-LDO50_RS19055;Name=LDO50_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19055;old_locus_tag=BVI1335_320035 NZ_CAJZAO010000246.1 Protein Homology CDS 28752 29651 . - 0 ID=cds-WP_224020022.1;Parent=gene-LDO50_RS19055;Dbxref=GenBank:WP_224020022.1;Name=WP_224020022.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216654.1;locus_tag=LDO50_RS19055;product=LysR family transcriptional regulator;protein_id=WP_224020022.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 29750 30730 . + . ID=gene-LDO50_RS19060;Name=LDO50_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19060;old_locus_tag=BVI1335_320036 NZ_CAJZAO010000246.1 Protein Homology CDS 29750 30730 . + 0 ID=cds-WP_011882565.1;Parent=gene-LDO50_RS19060;Dbxref=GenBank:WP_011882565.1;Name=WP_011882565.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882565.1;locus_tag=LDO50_RS19060;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_011882565.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 31508 32386 . + . ID=gene-LDO50_RS19065;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=LDO50_RS19065;old_locus_tag=BVI1335_320037 NZ_CAJZAO010000246.1 Protein Homology CDS 31508 32386 . + 0 ID=cds-WP_224020023.1;Parent=gene-LDO50_RS19065;Dbxref=GenBank:WP_224020023.1;Name=WP_224020023.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725365.1;locus_tag=LDO50_RS19065;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_224020023.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 32805 34043 . + . ID=gene-LDO50_RS19070;Name=LDO50_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19070;old_locus_tag=BVI1335_320038 NZ_CAJZAO010000246.1 Protein Homology CDS 32805 34043 . + 0 ID=cds-WP_045577830.1;Parent=gene-LDO50_RS19070;Dbxref=GenBank:WP_045577830.1;Name=WP_045577830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480924.1;locus_tag=LDO50_RS19070;product=ABC transporter substrate-binding protein;protein_id=WP_045577830.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 34040 34948 . + . ID=gene-LDO50_RS19075;Name=LDO50_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19075;old_locus_tag=BVI1335_320039 NZ_CAJZAO010000246.1 Protein Homology CDS 34040 34948 . + 0 ID=cds-WP_014725363.1;Parent=gene-LDO50_RS19075;Dbxref=GenBank:WP_014725363.1;Name=WP_014725363.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725363.1;locus_tag=LDO50_RS19075;product=carbohydrate ABC transporter permease;protein_id=WP_014725363.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 34918 35805 . + . ID=gene-LDO50_RS19080;Name=LDO50_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19080;old_locus_tag=BVI1335_320040 NZ_CAJZAO010000246.1 Protein Homology CDS 34918 35805 . + 0 ID=cds-WP_046423796.1;Parent=gene-LDO50_RS19080;Dbxref=GenBank:WP_046423796.1;Name=WP_046423796.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480926.1;locus_tag=LDO50_RS19080;product=carbohydrate ABC transporter permease;protein_id=WP_046423796.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 35815 36837 . - . ID=gene-LDO50_RS19085;Name=LDO50_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19085;old_locus_tag=BVI1335_320041 NZ_CAJZAO010000246.1 Protein Homology CDS 35815 36837 . - 0 ID=cds-WP_176044143.1;Parent=gene-LDO50_RS19085;Dbxref=GenBank:WP_176044143.1;Name=WP_176044143.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882560.1;locus_tag=LDO50_RS19085;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_176044143.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 36844 37758 . + . ID=gene-LDO50_RS19090;Name=LDO50_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19090;old_locus_tag=BVI1335_320042 NZ_CAJZAO010000246.1 Protein Homology CDS 36844 37758 . + 0 ID=cds-WP_176044144.1;Parent=gene-LDO50_RS19090;Dbxref=GenBank:WP_176044144.1;Name=WP_176044144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725360.1;locus_tag=LDO50_RS19090;product=phosphatidylinositol-specific phospholipase C;protein_id=WP_176044144.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 37755 38711 . - . ID=gene-LDO50_RS19095;Name=LDO50_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19095;old_locus_tag=BVI1335_320043 NZ_CAJZAO010000246.1 Protein Homology CDS 37755 38711 . - 0 ID=cds-WP_176044145.1;Parent=gene-LDO50_RS19095;Dbxref=GenBank:WP_176044145.1;Name=WP_176044145.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339728.1;locus_tag=LDO50_RS19095;product=alpha/beta hydrolase family protein;protein_id=WP_176044145.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq pseudogene 38823 39083 . - . ID=gene-LDO50_RS19100;Name=LDO50_RS19100;end_range=39083,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS19100;old_locus_tag=BVI1335_320044;partial=true;pseudo=true NZ_CAJZAO010000246.1 Protein Homology CDS 38823 39083 . - 0 ID=cds-LDO50_RS19100;Parent=gene-LDO50_RS19100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=39083,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760511.1;locus_tag=LDO50_RS19100;partial=true;product=LysE family translocator;pseudo=true;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 39216 39503 . - . ID=gene-LDO50_RS19105;Name=LDO50_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19105;old_locus_tag=BVI1335_320045 NZ_CAJZAO010000246.1 Protein Homology CDS 39216 39503 . - 0 ID=cds-WP_034194285.1;Parent=gene-LDO50_RS19105;Dbxref=GenBank:WP_034194285.1;Name=WP_034194285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216670.1;locus_tag=LDO50_RS19105;product=hypothetical protein;protein_id=WP_034194285.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 39595 40047 . - . ID=gene-LDO50_RS19110;Name=LDO50_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19110;old_locus_tag=BVI1335_320046 NZ_CAJZAO010000246.1 Protein Homology CDS 39595 40047 . - 0 ID=cds-WP_224020024.1;Parent=gene-LDO50_RS19110;Dbxref=GenBank:WP_224020024.1;Name=WP_224020024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699001.1;locus_tag=LDO50_RS19110;product=hypothetical protein;protein_id=WP_224020024.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 40044 41348 . - . ID=gene-LDO50_RS19115;Name=LDO50_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19115;old_locus_tag=BVI1335_320047 NZ_CAJZAO010000246.1 Protein Homology CDS 40044 41348 . - 0 ID=cds-WP_034194283.1;Parent=gene-LDO50_RS19115;Dbxref=GenBank:WP_034194283.1;Name=WP_034194283.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699000.1;locus_tag=LDO50_RS19115;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_034194283.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 41348 41710 . - . ID=gene-LDO50_RS19120;Name=LDO50_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19120;old_locus_tag=BVI1335_320048 NZ_CAJZAO010000246.1 Protein Homology CDS 41348 41710 . - 0 ID=cds-WP_034194282.1;Parent=gene-LDO50_RS19120;Dbxref=GenBank:WP_034194282.1;Name=WP_034194282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408999.1;locus_tag=LDO50_RS19120;product=hypothetical protein;protein_id=WP_034194282.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 41760 42038 . - . ID=gene-LDO50_RS19125;Name=LDO50_RS19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19125;old_locus_tag=BVI1335_320049 NZ_CAJZAO010000246.1 Protein Homology CDS 41760 42038 . - 0 ID=cds-WP_224020025.1;Parent=gene-LDO50_RS19125;Dbxref=GenBank:WP_224020025.1;Name=WP_224020025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414231.1;locus_tag=LDO50_RS19125;product=hypothetical protein;protein_id=WP_224020025.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 42210 42956 . - . ID=gene-LDO50_RS19130;Name=LDO50_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19130;old_locus_tag=BVI1335_320050 NZ_CAJZAO010000246.1 Protein Homology CDS 42210 42956 . - 0 ID=cds-WP_224020026.1;Parent=gene-LDO50_RS19130;Dbxref=GenBank:WP_224020026.1;Name=WP_224020026.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010926238.1;locus_tag=LDO50_RS19130;product=LexA family protein;protein_id=WP_224020026.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 42946 43215 . + . ID=gene-LDO50_RS19135;Name=LDO50_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19135 NZ_CAJZAO010000246.1 Protein Homology CDS 42946 43215 . + 0 ID=cds-WP_081065111.1;Parent=gene-LDO50_RS19135;Dbxref=GenBank:WP_081065111.1;Name=WP_081065111.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027273.6;locus_tag=LDO50_RS19135;product=transcriptional regulator;protein_id=WP_081065111.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 43299 43841 . + . ID=gene-LDO50_RS19140;Name=LDO50_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19140;old_locus_tag=BVI1335_320052 NZ_CAJZAO010000246.1 Protein Homology CDS 43299 43841 . + 0 ID=cds-WP_060044608.1;Parent=gene-LDO50_RS19140;Dbxref=GenBank:WP_060044608.1;Name=WP_060044608.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497122.1;locus_tag=LDO50_RS19140;product=phage regulatory CII family protein;protein_id=WP_060044608.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 43828 44211 . + . ID=gene-LDO50_RS19145;Name=LDO50_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19145 NZ_CAJZAO010000246.1 Protein Homology CDS 43828 44211 . + 0 ID=cds-WP_060044609.1;Parent=gene-LDO50_RS19145;Dbxref=GenBank:WP_060044609.1;Name=WP_060044609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657134.1;locus_tag=LDO50_RS19145;product=hypothetical protein;protein_id=WP_060044609.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 44472 46979 . + . ID=gene-LDO50_RS19150;Name=LDO50_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19150;old_locus_tag=BVI1335_320055 NZ_CAJZAO010000246.1 Protein Homology CDS 44472 46979 . + 0 ID=cds-WP_224020036.1;Parent=gene-LDO50_RS19150;Dbxref=GenBank:WP_224020036.1;Name=WP_224020036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533611.1;locus_tag=LDO50_RS19150;product=VapE domain-containing protein;protein_id=WP_224020036.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 47202 47975 . + . ID=gene-LDO50_RS19155;Name=LDO50_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19155;old_locus_tag=BVI1335_320056 NZ_CAJZAO010000246.1 Protein Homology CDS 47202 47975 . + 0 ID=cds-WP_060044611.1;Parent=gene-LDO50_RS19155;Dbxref=GenBank:WP_060044611.1;Name=WP_060044611.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409003.1;locus_tag=LDO50_RS19155;product=DnaJ-like cysteine-rich domain-containing protein;protein_id=WP_060044611.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 48164 48823 . + . ID=gene-LDO50_RS19160;Name=LDO50_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19160;old_locus_tag=BVI1335_320058 NZ_CAJZAO010000246.1 GeneMarkS-2+ CDS 48164 48823 . + 0 ID=cds-WP_224020027.1;Parent=gene-LDO50_RS19160;Dbxref=GenBank:WP_224020027.1;Name=WP_224020027.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS19160;product=hypothetical protein;protein_id=WP_224020027.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 48874 49068 . + . ID=gene-LDO50_RS19165;Name=LDO50_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19165;old_locus_tag=BVI1335_320059 NZ_CAJZAO010000246.1 Protein Homology CDS 48874 49068 . + 0 ID=cds-WP_060044613.1;Parent=gene-LDO50_RS19165;Dbxref=GenBank:WP_060044613.1;Name=WP_060044613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328156.1;locus_tag=LDO50_RS19165;product=hypothetical protein;protein_id=WP_060044613.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 49159 49728 . + . ID=gene-LDO50_RS19170;Name=LDO50_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19170;old_locus_tag=BVI1335_320060 NZ_CAJZAO010000246.1 Protein Homology CDS 49159 49728 . + 0 ID=cds-WP_176328113.1;Parent=gene-LDO50_RS19170;Dbxref=GenBank:WP_176328113.1;Name=WP_176328113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009964504.1;locus_tag=LDO50_RS19170;product=MarR family transcriptional regulator;protein_id=WP_176328113.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 49757 51676 . + . ID=gene-LDO50_RS19175;Name=LDO50_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19175;old_locus_tag=BVI1335_320061 NZ_CAJZAO010000246.1 Protein Homology CDS 49757 51676 . + 0 ID=cds-WP_372586109.1;Parent=gene-LDO50_RS19175;Dbxref=GenBank:WP_372586109.1;Name=WP_372586109.1;Ontology_term=GO:0004519,GO:0005524,GO:0016887;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538507.1;locus_tag=LDO50_RS19175;product=phage terminase large subunit family protein;protein_id=WP_372586109.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 51690 51896 . + . ID=gene-LDO50_RS19180;Name=LDO50_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19180;old_locus_tag=BVI1335_320062 NZ_CAJZAO010000246.1 Protein Homology CDS 51690 51896 . + 0 ID=cds-WP_006497114.1;Parent=gene-LDO50_RS19180;Dbxref=GenBank:WP_006497114.1;Name=WP_006497114.1;Ontology_term=GO:0019058;gbkey=CDS;go_process=viral life cycle|0019058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004552757.1;locus_tag=LDO50_RS19180;product=phage head-tail joining protein;protein_id=WP_006497114.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 51893 53386 . + . ID=gene-LDO50_RS19185;Name=LDO50_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19185;old_locus_tag=BVI1335_320063 NZ_CAJZAO010000246.1 Protein Homology CDS 51893 53386 . + 0 ID=cds-WP_224020028.1;Parent=gene-LDO50_RS19185;Dbxref=GenBank:WP_224020028.1;Name=WP_224020028.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254738.1;locus_tag=LDO50_RS19185;product=phage portal protein;protein_id=WP_224020028.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 53383 54444 . + . ID=gene-LDO50_RS19190;Name=LDO50_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19190;old_locus_tag=BVI1335_320064 NZ_CAJZAO010000246.1 Protein Homology CDS 53383 54444 . + 0 ID=cds-WP_060044616.1;Parent=gene-LDO50_RS19190;Dbxref=GenBank:WP_060044616.1;Name=WP_060044616.1;Ontology_term=GO:0046797,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=viral procapsid maturation|0046797||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004552759.1;locus_tag=LDO50_RS19190;product=head maturation protease%2C ClpP-related;protein_id=WP_060044616.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 54475 54819 . + . ID=gene-LDO50_RS19195;Name=LDO50_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19195;old_locus_tag=BVI1335_320065 NZ_CAJZAO010000246.1 Protein Homology CDS 54475 54819 . + 0 ID=cds-WP_060044617.1;Parent=gene-LDO50_RS19195;Dbxref=GenBank:WP_060044617.1;Name=WP_060044617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411289.1;locus_tag=LDO50_RS19195;product=head decoration protein;protein_id=WP_060044617.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 54892 55887 . + . ID=gene-LDO50_RS19200;Name=LDO50_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19200;old_locus_tag=BVI1335_320066 NZ_CAJZAO010000246.1 Protein Homology CDS 54892 55887 . + 0 ID=cds-WP_046423821.1;Parent=gene-LDO50_RS19200;Dbxref=GenBank:WP_046423821.1;Name=WP_046423821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497110.1;locus_tag=LDO50_RS19200;product=major capsid protein;protein_id=WP_046423821.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 55889 56179 . + . ID=gene-LDO50_RS19205;Name=LDO50_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19205;old_locus_tag=BVI1335_320067 NZ_CAJZAO010000246.1 Protein Homology CDS 55889 56179 . + 0 ID=cds-WP_059460922.1;Parent=gene-LDO50_RS19205;Dbxref=GenBank:WP_059460922.1;Name=WP_059460922.1;Ontology_term=GO:0019068;gbkey=CDS;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254742.1;locus_tag=LDO50_RS19205;product=head-tail joining protein;protein_id=WP_059460922.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 56185 56712 . + . ID=gene-LDO50_RS19210;Name=LDO50_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19210;old_locus_tag=BVI1335_320068 NZ_CAJZAO010000246.1 Protein Homology CDS 56185 56712 . + 0 ID=cds-WP_060044618.1;Parent=gene-LDO50_RS19210;Dbxref=GenBank:WP_060044618.1;Name=WP_060044618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408985.1;locus_tag=LDO50_RS19210;product=phage tail protein;protein_id=WP_060044618.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 56705 57232 . + . ID=gene-LDO50_RS19215;Name=LDO50_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19215;old_locus_tag=BVI1335_320069 NZ_CAJZAO010000246.1 Protein Homology CDS 56705 57232 . + 0 ID=cds-WP_059568563.1;Parent=gene-LDO50_RS19215;Dbxref=GenBank:WP_059568563.1;Name=WP_059568563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414286.1;locus_tag=LDO50_RS19215;product=hypothetical protein;protein_id=WP_059568563.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 57229 57909 . + . ID=gene-LDO50_RS19220;Name=LDO50_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19220;old_locus_tag=BVI1335_320070 NZ_CAJZAO010000246.1 Protein Homology CDS 57229 57909 . + 0 ID=cds-WP_059668613.1;Parent=gene-LDO50_RS19220;Dbxref=GenBank:WP_059668613.1;Name=WP_059668613.1;Ontology_term=GO:0098003,GO:0046872,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_function=metal ion binding|0046872||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533661.1;locus_tag=LDO50_RS19220;product=phage baseplate assembly protein V;protein_id=WP_059668613.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 57974 58180 . + . ID=gene-LDO50_RS19225;Name=LDO50_RS19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19225 NZ_CAJZAO010000246.1 Protein Homology CDS 57974 58180 . + 0 ID=cds-WP_060044627.1;Parent=gene-LDO50_RS19225;Dbxref=GenBank:WP_060044627.1;Name=WP_060044627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411284.1;locus_tag=LDO50_RS19225;product=hypothetical protein;protein_id=WP_060044627.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 58177 58521 . + . ID=gene-LDO50_RS19230;Name=LDO50_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19230;old_locus_tag=BVI1335_320071 NZ_CAJZAO010000246.1 Protein Homology CDS 58177 58521 . + 0 ID=cds-WP_059695472.1;Parent=gene-LDO50_RS19230;Dbxref=GenBank:WP_059695472.1;Name=WP_059695472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004539881.1;locus_tag=LDO50_RS19230;product=GPW/gp25 family protein;protein_id=WP_059695472.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 58518 59411 . + . ID=gene-LDO50_RS19235;Name=LDO50_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19235;old_locus_tag=BVI1335_320072 NZ_CAJZAO010000246.1 Protein Homology CDS 58518 59411 . + 0 ID=cds-WP_060044619.1;Parent=gene-LDO50_RS19235;Dbxref=GenBank:WP_060044619.1;Name=WP_060044619.1;Ontology_term=GO:0098045,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_process=virus baseplate assembly|0098045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408983.1;locus_tag=LDO50_RS19235;product=baseplate assembly protein;protein_id=WP_060044619.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 59401 59970 . + . ID=gene-LDO50_RS19240;Name=LDO50_RS19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19240;old_locus_tag=BVI1335_320073 NZ_CAJZAO010000246.1 Protein Homology CDS 59401 59970 . + 0 ID=cds-WP_081065113.1;Parent=gene-LDO50_RS19240;Dbxref=GenBank:WP_081065113.1;Name=WP_081065113.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497099.1;locus_tag=LDO50_RS19240;product=phage tail protein I;protein_id=WP_081065113.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 59967 61073 . + . ID=gene-LDO50_RS19245;Name=LDO50_RS19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19245;old_locus_tag=BVI1335_320074 NZ_CAJZAO010000246.1 Protein Homology CDS 59967 61073 . + 0 ID=cds-WP_224020029.1;Parent=gene-LDO50_RS19245;Dbxref=GenBank:WP_224020029.1;Name=WP_224020029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408978.1;locus_tag=LDO50_RS19245;product=gp53-like domain-containing protein;protein_id=WP_224020029.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 61084 61539 . + . ID=gene-LDO50_RS19250;Name=LDO50_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19250;old_locus_tag=BVI1335_320075 NZ_CAJZAO010000246.1 Protein Homology CDS 61084 61539 . + 0 ID=cds-WP_059460966.1;Parent=gene-LDO50_RS19250;Dbxref=GenBank:WP_059460966.1;Name=WP_059460966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089507.1;locus_tag=LDO50_RS19250;product=phage tail assembly chaperone;protein_id=WP_059460966.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 61617 62786 . + . ID=gene-LDO50_RS19255;Name=LDO50_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19255;old_locus_tag=BVI1335_320076 NZ_CAJZAO010000246.1 Protein Homology CDS 61617 62786 . + 0 ID=cds-WP_060044620.1;Parent=gene-LDO50_RS19255;Dbxref=GenBank:WP_060044620.1;Name=WP_060044620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004552767.1;locus_tag=LDO50_RS19255;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_060044620.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 62797 63300 . + . ID=gene-LDO50_RS19260;Name=LDO50_RS19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19260;old_locus_tag=BVI1335_320077 NZ_CAJZAO010000246.1 Protein Homology CDS 62797 63300 . + 0 ID=cds-WP_034194260.1;Parent=gene-LDO50_RS19260;Dbxref=GenBank:WP_034194260.1;Name=WP_034194260.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004552768.1;locus_tag=LDO50_RS19260;product=phage major tail tube protein;protein_id=WP_034194260.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 63394 63723 . + . ID=gene-LDO50_RS19265;Name=LDO50_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19265;old_locus_tag=BVI1335_320078 NZ_CAJZAO010000246.1 Protein Homology CDS 63394 63723 . + 0 ID=cds-WP_059456089.1;Parent=gene-LDO50_RS19265;Dbxref=GenBank:WP_059456089.1;Name=WP_059456089.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411973.1;locus_tag=LDO50_RS19265;product=phage tail assembly protein;protein_id=WP_059456089.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 63779 66193 . + . ID=gene-LDO50_RS19270;Name=LDO50_RS19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19270;old_locus_tag=BVI1335_320080 NZ_CAJZAO010000246.1 Protein Homology CDS 63779 66193 . + 0 ID=cds-WP_060044621.1;Parent=gene-LDO50_RS19270;Dbxref=GenBank:WP_060044621.1;Name=WP_060044621.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414280.1;locus_tag=LDO50_RS19270;product=phage tail tape measure protein;protein_id=WP_060044621.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 66203 67084 . + . ID=gene-LDO50_RS19275;Name=LDO50_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19275;old_locus_tag=BVI1335_320081 NZ_CAJZAO010000246.1 Protein Homology CDS 66203 67084 . + 0 ID=cds-WP_060044622.1;Parent=gene-LDO50_RS19275;Dbxref=GenBank:WP_060044622.1;Name=WP_060044622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533686.1;locus_tag=LDO50_RS19275;product=phage tail protein;protein_id=WP_060044622.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 67059 67265 . + . ID=gene-LDO50_RS19280;Name=LDO50_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19280;old_locus_tag=BVI1335_320082 NZ_CAJZAO010000246.1 Protein Homology CDS 67059 67265 . + 0 ID=cds-WP_034194256.1;Parent=gene-LDO50_RS19280;Dbxref=GenBank:WP_034194256.1;Name=WP_034194256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009964543.1;locus_tag=LDO50_RS19280;product=tail protein X;protein_id=WP_034194256.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 67276 68328 . + . ID=gene-LDO50_RS19285;Name=LDO50_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19285;old_locus_tag=BVI1335_320083 NZ_CAJZAO010000246.1 Protein Homology CDS 67276 68328 . + 0 ID=cds-WP_060044623.1;Parent=gene-LDO50_RS19285;Dbxref=GenBank:WP_060044623.1;Name=WP_060044623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004539808.1;locus_tag=LDO50_RS19285;product=phage late control D family protein;protein_id=WP_060044623.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 68404 68853 . + . ID=gene-LDO50_RS19290;Name=LDO50_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19290;old_locus_tag=BVI1335_320085 NZ_CAJZAO010000246.1 GeneMarkS-2+ CDS 68404 68853 . + 0 ID=cds-WP_034194254.1;Parent=gene-LDO50_RS19290;Dbxref=GenBank:WP_034194254.1;Name=WP_034194254.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS19290;product=hypothetical protein;protein_id=WP_034194254.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 68850 69416 . + . ID=gene-LDO50_RS19295;Name=LDO50_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19295;old_locus_tag=BVI1335_320086 NZ_CAJZAO010000246.1 Protein Homology CDS 68850 69416 . + 0 ID=cds-WP_034194253.1;Parent=gene-LDO50_RS19295;Dbxref=GenBank:WP_034194253.1;Name=WP_034194253.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698664.1;locus_tag=LDO50_RS19295;product=glycoside hydrolase family 108 protein;protein_id=WP_034194253.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 69413 70060 . + . ID=gene-LDO50_RS19300;Name=LDO50_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19300;old_locus_tag=BVI1335_320087 NZ_CAJZAO010000246.1 Protein Homology CDS 69413 70060 . + 0 ID=cds-WP_034194252.1;Parent=gene-LDO50_RS19300;Dbxref=GenBank:WP_034194252.1;Name=WP_034194252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497087.1;locus_tag=LDO50_RS19300;product=hypothetical protein;protein_id=WP_034194252.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 70216 71004 . + . ID=gene-LDO50_RS19305;Name=LDO50_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19305;old_locus_tag=BVI1335_320088 NZ_CAJZAO010000246.1 Protein Homology CDS 70216 71004 . + 0 ID=cds-WP_034194251.1;Parent=gene-LDO50_RS19305;Dbxref=GenBank:WP_034194251.1;Name=WP_034194251.1;Ontology_term=GO:0032775,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890252.1;locus_tag=LDO50_RS19305;product=DNA adenine methylase;protein_id=WP_034194251.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 71134 71601 . - . ID=gene-LDO50_RS19310;Name=LDO50_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19310;old_locus_tag=BVI1335_320089 NZ_CAJZAO010000246.1 Protein Homology CDS 71134 71601 . - 0 ID=cds-WP_224020031.1;Parent=gene-LDO50_RS19310;Dbxref=GenBank:WP_224020031.1;Name=WP_224020031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017844310.1;locus_tag=LDO50_RS19310;product=hypothetical protein;protein_id=WP_224020031.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 71677 72381 . + . ID=gene-LDO50_RS19315;Name=LDO50_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19315;old_locus_tag=BVI1335_320090 NZ_CAJZAO010000246.1 Protein Homology CDS 71677 72381 . + 0 ID=cds-WP_060044624.1;Parent=gene-LDO50_RS19315;Dbxref=GenBank:WP_060044624.1;Name=WP_060044624.1;Ontology_term=GO:0006974,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657096.1;locus_tag=LDO50_RS19315;product=SOS response-associated peptidase family protein;protein_id=WP_060044624.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 72721 73251 . + . ID=gene-LDO50_RS19320;Name=LDO50_RS19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19320;old_locus_tag=BVI1335_320092 NZ_CAJZAO010000246.1 Protein Homology CDS 72721 73251 . + 0 ID=cds-WP_081065114.1;Parent=gene-LDO50_RS19320;Dbxref=GenBank:WP_081065114.1;Name=WP_081065114.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017020.6;locus_tag=LDO50_RS19320;product=HEPN domain-containing protein;protein_id=WP_081065114.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 73241 74896 . + . ID=gene-LDO50_RS19325;Name=LDO50_RS19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19325;old_locus_tag=BVI1335_320093 NZ_CAJZAO010000246.1 Protein Homology CDS 73241 74896 . + 0 ID=cds-WP_224020032.1;Parent=gene-LDO50_RS19325;Dbxref=GenBank:WP_224020032.1;Name=WP_224020032.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF024589.6;locus_tag=LDO50_RS19325;product=ATP-binding protein;protein_id=WP_224020032.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 75185 75451 . + . ID=gene-LDO50_RS19330;Name=LDO50_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19330;old_locus_tag=BVI1335_320094 NZ_CAJZAO010000246.1 GeneMarkS-2+ CDS 75185 75451 . + 0 ID=cds-WP_034194247.1;Parent=gene-LDO50_RS19330;Dbxref=GenBank:WP_034194247.1;Name=WP_034194247.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS19330;product=hypothetical protein;protein_id=WP_034194247.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 75806 76288 . - . ID=gene-LDO50_RS19335;Name=LDO50_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19335;old_locus_tag=BVI1335_320095 NZ_CAJZAO010000246.1 GeneMarkS-2+ CDS 75806 76288 . - 0 ID=cds-WP_059475359.1;Parent=gene-LDO50_RS19335;Dbxref=GenBank:WP_059475359.1;Name=WP_059475359.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS19335;product=hypothetical protein;protein_id=WP_059475359.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 76663 76890 . - . ID=gene-LDO50_RS19340;Name=LDO50_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19340;old_locus_tag=BVI1335_320098 NZ_CAJZAO010000246.1 Protein Homology CDS 76663 76890 . - 0 ID=cds-WP_072465520.1;Parent=gene-LDO50_RS19340;Dbxref=GenBank:WP_072465520.1;Name=WP_072465520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012434300.1;locus_tag=LDO50_RS19340;product=hypothetical protein;protein_id=WP_072465520.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 77336 79030 . - . ID=gene-LDO50_RS19345;Name=LDO50_RS19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19345;old_locus_tag=BVI1335_320099 NZ_CAJZAO010000246.1 Protein Homology CDS 77336 79030 . - 0 ID=cds-WP_034194244.1;Parent=gene-LDO50_RS19345;Dbxref=GenBank:WP_034194244.1;Name=WP_034194244.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216731.1;locus_tag=LDO50_RS19345;product=recombinase family protein;protein_id=WP_034194244.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 79043 79654 . - . ID=gene-LDO50_RS19350;Name=LDO50_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19350;old_locus_tag=BVI1335_320100 NZ_CAJZAO010000246.1 Protein Homology CDS 79043 79654 . - 0 ID=cds-WP_034194243.1;Parent=gene-LDO50_RS19350;Dbxref=GenBank:WP_034194243.1;Name=WP_034194243.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204410.1;locus_tag=LDO50_RS19350;product=LysE family translocator;protein_id=WP_034194243.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq pseudogene 79719 80093 . - . ID=gene-LDO50_RS19355;Name=LDO50_RS19355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS19355;old_locus_tag=BVI1335_320101;partial=true;pseudo=true;start_range=.,79719 NZ_CAJZAO010000246.1 Protein Homology CDS 79719 80093 . - 0 ID=cds-LDO50_RS19355;Parent=gene-LDO50_RS19355;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204410.1;locus_tag=LDO50_RS19355;partial=true;product=LysE family translocator;pseudo=true;start_range=.,79719;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 80180 80707 . + . ID=gene-LDO50_RS19360;Name=LDO50_RS19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19360;old_locus_tag=BVI1335_320102 NZ_CAJZAO010000246.1 Protein Homology CDS 80180 80707 . + 0 ID=cds-WP_011882556.1;Parent=gene-LDO50_RS19360;Dbxref=GenBank:WP_011882556.1;Name=WP_011882556.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216733.1;locus_tag=LDO50_RS19360;product=GNAT family N-acetyltransferase;protein_id=WP_011882556.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 80720 81781 . - . ID=gene-LDO50_RS19365;Name=LDO50_RS19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19365;old_locus_tag=BVI1335_320103 NZ_CAJZAO010000246.1 Protein Homology CDS 80720 81781 . - 0 ID=cds-WP_011882555.1;Parent=gene-LDO50_RS19365;Dbxref=GenBank:WP_011882555.1;Name=WP_011882555.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602739.1;locus_tag=LDO50_RS19365;product=alkene reductase;protein_id=WP_011882555.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 81851 82159 . - . ID=gene-LDO50_RS19370;Name=LDO50_RS19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19370;old_locus_tag=BVI1335_320104 NZ_CAJZAO010000246.1 Protein Homology CDS 81851 82159 . - 0 ID=cds-WP_011882554.1;Parent=gene-LDO50_RS19370;Dbxref=GenBank:WP_011882554.1;Name=WP_011882554.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898858.1;locus_tag=LDO50_RS19370;product=ArsR/SmtB family transcription factor;protein_id=WP_011882554.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 82297 83196 . - . ID=gene-LDO50_RS19375;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=LDO50_RS19375;old_locus_tag=BVI1335_320105 NZ_CAJZAO010000246.1 Protein Homology CDS 82297 83196 . - 0 ID=cds-WP_175898617.1;Parent=gene-LDO50_RS19375;Dbxref=GenBank:WP_175898617.1;Name=WP_175898617.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=gcvA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882553.1;locus_tag=LDO50_RS19375;product=transcriptional regulator GcvA;protein_id=WP_175898617.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 83316 84020 . + . ID=gene-LDO50_RS19380;Name=LDO50_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19380;old_locus_tag=BVI1335_320106 NZ_CAJZAO010000246.1 Protein Homology CDS 83316 84020 . + 0 ID=cds-WP_175949097.1;Parent=gene-LDO50_RS19380;Dbxref=GenBank:WP_175949097.1;Name=WP_175949097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404426.1;locus_tag=LDO50_RS19380;product=SDR family oxidoreductase;protein_id=WP_175949097.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 84079 85218 . - . ID=gene-LDO50_RS19385;Name=LDO50_RS19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19385;old_locus_tag=BVI1335_320107 NZ_CAJZAO010000246.1 Protein Homology CDS 84079 85218 . - 0 ID=cds-WP_011882551.1;Parent=gene-LDO50_RS19385;Dbxref=GenBank:WP_011882551.1;Name=WP_011882551.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753646.1;locus_tag=LDO50_RS19385;product=patatin-like phospholipase family protein;protein_id=WP_011882551.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 85852 87606 . + . ID=gene-LDO50_RS19390;Name=LDO50_RS19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19390;old_locus_tag=BVI1335_320109 NZ_CAJZAO010000246.1 Protein Homology CDS 85852 87606 . + 0 ID=cds-WP_059894172.1;Parent=gene-LDO50_RS19390;Dbxref=GenBank:WP_059894172.1;Name=WP_059894172.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892433.1;locus_tag=LDO50_RS19390;product=ABC transporter permease;protein_id=WP_059894172.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq pseudogene 87618 87850 . + . ID=gene-LDO50_RS31840;Name=LDO50_RS31840;end_range=87850,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31840;partial=true;pseudo=true NZ_CAJZAO010000246.1 Protein Homology CDS 87618 87850 . + 0 ID=cds-LDO50_RS31840;Parent=gene-LDO50_RS31840;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0005524;end_range=87850,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484429.1;locus_tag=LDO50_RS31840;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 87861 88885 . + . ID=gene-LDO50_RS19395;Name=LDO50_RS19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19395;old_locus_tag=BVI1335_320111;partial=true;start_range=.,87861 NZ_CAJZAO010000246.1 Protein Homology CDS 87861 88885 . + 2 ID=cds-WP_443797826.1;Parent=gene-LDO50_RS19395;Dbxref=GenBank:WP_443797826.1;Name=WP_443797826.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484429.1;locus_tag=LDO50_RS19395;partial=true;product=ABC transporter ATP-binding protein;protein_id=WP_443797826.1;start_range=.,87861;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 88935 89813 . - . ID=gene-LDO50_RS19400;Name=LDO50_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19400;old_locus_tag=BVI1335_320112 NZ_CAJZAO010000246.1 Protein Homology CDS 88935 89813 . - 0 ID=cds-WP_059461022.1;Parent=gene-LDO50_RS19400;Dbxref=GenBank:WP_059461022.1;Name=WP_059461022.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882548.1;locus_tag=LDO50_RS19400;product=MurR/RpiR family transcriptional regulator;protein_id=WP_059461022.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 90001 90174 . - . ID=gene-LDO50_RS19405;Name=LDO50_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19405 NZ_CAJZAO010000246.1 GeneMarkS-2+ CDS 90001 90174 . - 0 ID=cds-WP_155624709.1;Parent=gene-LDO50_RS19405;Dbxref=GenBank:WP_155624709.1;Name=WP_155624709.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS19405;product=hypothetical protein;protein_id=WP_155624709.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 90173 91924 . + . ID=gene-LDO50_RS19410;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=LDO50_RS19410;old_locus_tag=BVI1335_320115 NZ_CAJZAO010000246.1 Protein Homology CDS 90173 91924 . + 0 ID=cds-WP_034195256.1;Parent=gene-LDO50_RS19410;Dbxref=GenBank:WP_034195256.1;Name=WP_034195256.1;Ontology_term=GO:0006750,GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione biosynthetic process|0006750||IEA,glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760501.1;locus_tag=LDO50_RS19410;product=gamma-glutamyltransferase;protein_id=WP_034195256.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq pseudogene 91918 92130 . + . ID=gene-LDO50_RS19415;Name=LDO50_RS19415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS19415;old_locus_tag=BVI1335_320114;partial=true;pseudo=true;start_range=.,91918 NZ_CAJZAO010000246.1 Protein Homology CDS 91918 92130 . + 0 ID=cds-LDO50_RS19415;Parent=gene-LDO50_RS19415;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766172.1;locus_tag=LDO50_RS19415;partial=true;product=dicarboxylate/amino acid:cation symporter;pseudo=true;start_range=.,91918;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 92242 92625 . - . ID=gene-LDO50_RS19420;Name=LDO50_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19420;old_locus_tag=BVI1335_320116 NZ_CAJZAO010000246.1 Protein Homology CDS 92242 92625 . - 0 ID=cds-WP_014725317.1;Parent=gene-LDO50_RS19420;Dbxref=GenBank:WP_014725317.1;Name=WP_014725317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752581.1;locus_tag=LDO50_RS19420;product=YXWGXW repeat-containing protein;protein_id=WP_014725317.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 93238 94341 . + . ID=gene-LDO50_RS19425;Name=LDO50_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19425;old_locus_tag=BVI1335_320117 NZ_CAJZAO010000246.1 Protein Homology CDS 93238 94341 . + 0 ID=cds-WP_014725316.1;Parent=gene-LDO50_RS19425;Dbxref=GenBank:WP_014725316.1;Name=WP_014725316.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396739.1;locus_tag=LDO50_RS19425;product=porin;protein_id=WP_014725316.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 94543 94941 . - . ID=gene-LDO50_RS19430;Name=LDO50_RS19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19430;old_locus_tag=BVI1335_320118 NZ_CAJZAO010000246.1 Protein Homology CDS 94543 94941 . - 0 ID=cds-WP_059463061.1;Parent=gene-LDO50_RS19430;Dbxref=GenBank:WP_059463061.1;Name=WP_059463061.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761842.1;locus_tag=LDO50_RS19430;product=GreA/GreB family elongation factor;protein_id=WP_059463061.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 95452 95781 . + . ID=gene-LDO50_RS19435;Name=LDO50_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19435;old_locus_tag=BVI1335_320119 NZ_CAJZAO010000246.1 Protein Homology CDS 95452 95781 . + 0 ID=cds-WP_224020033.1;Parent=gene-LDO50_RS19435;Dbxref=GenBank:WP_224020033.1;Name=WP_224020033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496913.1;locus_tag=LDO50_RS19435;product=DUF4148 domain-containing protein;protein_id=WP_224020033.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 95933 96394 . - . ID=gene-LDO50_RS19440;Name=LDO50_RS19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19440;old_locus_tag=BVI1335_320120 NZ_CAJZAO010000246.1 Protein Homology CDS 95933 96394 . - 0 ID=cds-WP_014725314.1;Parent=gene-LDO50_RS19440;Dbxref=GenBank:WP_014725314.1;Name=WP_014725314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486040.1;locus_tag=LDO50_RS19440;product=CBS domain-containing protein;protein_id=WP_014725314.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 96571 97221 . + . ID=gene-LDO50_RS19445;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=LDO50_RS19445;old_locus_tag=BVI1335_320121 NZ_CAJZAO010000246.1 Protein Homology CDS 96571 97221 . + 0 ID=cds-WP_011882540.1;Parent=gene-LDO50_RS19445;Dbxref=GenBank:WP_011882540.1;Name=WP_011882540.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195483.1;locus_tag=LDO50_RS19445;product=GTP cyclohydrolase II;protein_id=WP_011882540.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 97443 98717 . + . ID=gene-LDO50_RS19450;Name=LDO50_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19450;old_locus_tag=BVI1335_320123 NZ_CAJZAO010000246.1 Protein Homology CDS 97443 98717 . + 0 ID=cds-WP_059461024.1;Parent=gene-LDO50_RS19450;Dbxref=GenBank:WP_059461024.1;Name=WP_059461024.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339748.1;locus_tag=LDO50_RS19450;product=tyrosine-type recombinase/integrase;protein_id=WP_059461024.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 98881 99213 . + . ID=gene-LDO50_RS19455;Name=LDO50_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19455 NZ_CAJZAO010000246.1 Protein Homology CDS 98881 99213 . + 0 ID=cds-WP_045577810.1;Parent=gene-LDO50_RS19455;Dbxref=GenBank:WP_045577810.1;Name=WP_045577810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365323.1;locus_tag=LDO50_RS19455;product=barstar family protein;protein_id=WP_045577810.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 99307 100104 . + . ID=gene-LDO50_RS19460;Name=LDO50_RS19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19460;old_locus_tag=BVI1335_320125 NZ_CAJZAO010000246.1 GeneMarkS-2+ CDS 99307 100104 . + 0 ID=cds-WP_176315856.1;Parent=gene-LDO50_RS19460;Dbxref=GenBank:WP_176315856.1;Name=WP_176315856.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS19460;product=hypothetical protein;protein_id=WP_176315856.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 100249 100875 . + . ID=gene-LDO50_RS19465;Name=LDO50_RS19465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19465;old_locus_tag=BVI1335_320127 NZ_CAJZAO010000246.1 Protein Homology CDS 100249 100875 . + 0 ID=cds-WP_059547347.1;Parent=gene-LDO50_RS19465;Dbxref=GenBank:WP_059547347.1;Name=WP_059547347.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004552423.1;locus_tag=LDO50_RS19465;product=tyrosine-type recombinase/integrase;protein_id=WP_059547347.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 100901 102280 . + . ID=gene-LDO50_RS19470;Name=LDO50_RS19470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19470;old_locus_tag=BVI1335_320128 NZ_CAJZAO010000246.1 Protein Homology CDS 100901 102280 . + 0 ID=cds-WP_196485254.1;Parent=gene-LDO50_RS19470;Dbxref=GenBank:WP_196485254.1;Name=WP_196485254.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015210.6;locus_tag=LDO50_RS19470;product=GmrSD restriction endonuclease domain-containing protein;protein_id=WP_196485254.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 102286 103326 . + . ID=gene-LDO50_RS19475;Name=LDO50_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19475;old_locus_tag=BVI1335_320130 NZ_CAJZAO010000246.1 Protein Homology CDS 102286 103326 . + 0 ID=cds-WP_224020034.1;Parent=gene-LDO50_RS19475;Dbxref=GenBank:WP_224020034.1;Name=WP_224020034.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037890.6;locus_tag=LDO50_RS19475;product=MAE_28990/MAE_18760 family HEPN-like nuclease;protein_id=WP_224020034.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 103558 103854 . - . ID=gene-LDO50_RS19480;Name=LDO50_RS19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19480;old_locus_tag=BVI1335_320133 NZ_CAJZAO010000246.1 Protein Homology CDS 103558 103854 . - 0 ID=cds-WP_224020035.1;Parent=gene-LDO50_RS19480;Dbxref=GenBank:WP_224020035.1;Name=WP_224020035.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016023126.1;locus_tag=LDO50_RS19480;product=helix-turn-helix transcriptional regulator;protein_id=WP_224020035.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 103872 104084 . - . ID=gene-LDO50_RS19485;Name=LDO50_RS19485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19485;old_locus_tag=BVI1335_320134 NZ_CAJZAO010000246.1 GeneMarkS-2+ CDS 103872 104084 . - 0 ID=cds-WP_196483672.1;Parent=gene-LDO50_RS19485;Dbxref=GenBank:WP_196483672.1;Name=WP_196483672.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS19485;product=hypothetical protein;protein_id=WP_196483672.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 104083 104661 . + . ID=gene-LDO50_RS19490;Name=LDO50_RS19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19490 NZ_CAJZAO010000246.1 GeneMarkS-2+ CDS 104083 104661 . + 0 ID=cds-WP_155626212.1;Parent=gene-LDO50_RS19490;Dbxref=GenBank:WP_155626212.1;Name=WP_155626212.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS19490;product=hypothetical protein;protein_id=WP_155626212.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 104682 104807 . - . ID=gene-LDO50_RS30865;Name=LDO50_RS30865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30865;old_locus_tag=BVI1335_320135 NZ_CAJZAO010000246.1 GeneMarkS-2+ CDS 104682 104807 . - 0 ID=cds-WP_269138927.1;Parent=gene-LDO50_RS30865;Dbxref=GenBank:WP_269138927.1;Name=WP_269138927.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS30865;product=hypothetical protein;protein_id=WP_269138927.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq gene 104886 105317 . - . ID=gene-LDO50_RS19495;Name=LDO50_RS19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19495 NZ_CAJZAO010000246.1 GeneMarkS-2+ CDS 104886 105317 . - 0 ID=cds-WP_155626213.1;Parent=gene-LDO50_RS19495;Dbxref=GenBank:WP_155626213.1;Name=WP_155626213.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS19495;product=hypothetical protein;protein_id=WP_155626213.1;transl_table=11 NZ_CAJZAO010000246.1 RefSeq pseudogene 105337 105764 . - . ID=gene-LDO50_RS19500;Name=LDO50_RS19500;end_range=105764,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS19500;old_locus_tag=BVI1335_320138;partial=true;pseudo=true NZ_CAJZAO010000246.1 GeneMarkS-2+ CDS 105337 105764 . - 2 ID=cds-LDO50_RS19500;Parent=gene-LDO50_RS19500;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=105764,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS19500;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000247.1 1 1900 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000247.1 RefSeq region 1 1900 . + . ID=NZ_CAJZAO010000247.1:1..1900;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_320 NZ_CAJZAO010000247.1 RefSeq pseudogene 1 1783 . - . ID=gene-LDO50_RS19505;Name=LDO50_RS19505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS19505;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000247.1 Protein Homology CDS 1 1783 . - 0 ID=cds-LDO50_RS19505;Parent=gene-LDO50_RS19505;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754503.1;locus_tag=LDO50_RS19505;partial=true;product=LWXIA domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAO010000248.1 1 1786 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000248.1 RefSeq region 1 1786 . + . ID=NZ_CAJZAO010000248.1:1..1786;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_321 NZ_CAJZAO010000248.1 RefSeq gene 1 1648 . + . ID=gene-LDO50_RS19510;Name=LDO50_RS19510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19510;old_locus_tag=BVI1335_3210001;partial=true;start_range=.,1 NZ_CAJZAO010000248.1 Protein Homology CDS 1 1648 . + 1 ID=cds-WP_224020037.1;Parent=gene-LDO50_RS19510;Dbxref=GenBank:WP_224020037.1;Name=WP_224020037.1;Ontology_term=GO:0009306,GO:0097347;gbkey=CDS;go_component=TAM protein secretion complex|0097347||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004546444.1;locus_tag=LDO50_RS19510;partial=true;product=autotransporter assembly complex protein TamA;protein_id=WP_224020037.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAO010000249.1 1 1838 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000249.1 RefSeq region 1 1838 . + . ID=NZ_CAJZAO010000249.1:1..1838;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_322 NZ_CAJZAO010000249.1 RefSeq gene 109 804 . - . ID=gene-LDO50_RS19515;Name=LDO50_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19515;old_locus_tag=BVI1335_3220002 NZ_CAJZAO010000249.1 Protein Homology CDS 109 804 . - 0 ID=cds-WP_155625019.1;Parent=gene-LDO50_RS19515;Dbxref=GenBank:WP_155625019.1;Name=WP_155625019.1;Ontology_term=GO:0042953,GO:0044874,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=lipoprotein transport|0042953||IEA,lipoprotein localization to outer membrane|0044874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723651.1;locus_tag=LDO50_RS19515;product=outer membrane lipoprotein carrier protein LolA;protein_id=WP_155625019.1;transl_table=11 NZ_CAJZAO010000249.1 RefSeq gene 801 1601 . - . ID=gene-LDO50_RS19520;Name=LDO50_RS19520;end_range=1601,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19520;old_locus_tag=BVI1335_3220003;partial=true NZ_CAJZAO010000249.1 Protein Homology CDS 801 1601 . - 0 ID=cds-WP_443797827.1;Parent=gene-LDO50_RS19520;Dbxref=GenBank:WP_443797827.1;Name=WP_443797827.1;Ontology_term=GO:0016740,GO:0016020;end_range=1601,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723650.1;locus_tag=LDO50_RS19520;partial=true;product=LpxL/LpxP family acyltransferase;protein_id=WP_443797827.1;transl_table=11 NZ_CAJZAO010000249.1 RefSeq pseudogene 1612 1772 . - . ID=gene-LDO50_RS31845;Name=LDO50_RS31845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31845;old_locus_tag=BVI1335_3220004;partial=true;pseudo=true;start_range=.,1612 NZ_CAJZAO010000249.1 Protein Homology CDS 1612 1772 . - 0 ID=cds-LDO50_RS31845;Parent=gene-LDO50_RS31845;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761634.1;locus_tag=LDO50_RS31845;partial=true;product=acyl-CoA synthetase;pseudo=true;start_range=.,1612;transl_table=11 ##sequence-region NZ_CAJZAO010000250.1 1 1392 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000250.1 RefSeq region 1 1392 . + . ID=NZ_CAJZAO010000250.1:1..1392;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_323 NZ_CAJZAO010000250.1 RefSeq gene 1 1082 . - . ID=gene-LDO50_RS19525;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=LDO50_RS19525;partial=true;start_range=.,1 NZ_CAJZAO010000250.1 Protein Homology CDS 1 1082 . - 0 ID=cds-WP_224020039.1;Parent=gene-LDO50_RS19525;Dbxref=GenBank:WP_224020039.1;Name=WP_224020039.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004549253.1;locus_tag=LDO50_RS19525;partial=true;product=selenocysteine-specific translation elongation factor;protein_id=WP_224020039.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000250.1 RefSeq pseudogene 1079 1392 . - . ID=gene-LDO50_RS19530;Name=LDO50_RS19530;end_range=1392,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS19530;old_locus_tag=BVI1335_3230002;partial=true;pseudo=true NZ_CAJZAO010000250.1 Protein Homology CDS 1079 1392 . - 2 ID=cds-LDO50_RS19530;Parent=gene-LDO50_RS19530;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1392,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853592.1;locus_tag=LDO50_RS19530;partial=true;product=L-seryl-tRNA(Sec) selenium transferase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000251.1 1 930 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000251.1 RefSeq region 1 930 . + . ID=NZ_CAJZAO010000251.1:1..930;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_324 NZ_CAJZAO010000251.1 RefSeq gene 1 321 . + . ID=gene-LDO50_RS19535;Name=LDO50_RS19535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19535;old_locus_tag=BVI1335_3240001;partial=true;start_range=.,1 NZ_CAJZAO010000251.1 Protein Homology CDS 1 321 . + 0 ID=cds-WP_224020040.1;Parent=gene-LDO50_RS19535;Dbxref=GenBank:WP_224020040.1;Name=WP_224020040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723762.1;locus_tag=LDO50_RS19535;partial=true;product=molybdopterin cofactor-binding domain-containing protein;protein_id=WP_224020040.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000251.1 RefSeq gene 499 930 . - . ID=gene-LDO50_RS19540;Name=LDO50_RS19540;end_range=930,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19540;old_locus_tag=BVI1335_3240002;partial=true NZ_CAJZAO010000251.1 Protein Homology CDS 499 930 . - 0 ID=cds-WP_372586110.1;Parent=gene-LDO50_RS19540;Dbxref=GenBank:WP_372586110.1;Name=WP_372586110.1;Ontology_term=GO:0055085,GO:0022857;end_range=930,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886192.1;locus_tag=LDO50_RS19540;partial=true;product=MFS transporter;protein_id=WP_372586110.1;transl_table=11 ##sequence-region NZ_CAJZAO010000252.1 1 5204 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000252.1 RefSeq region 1 5204 . + . ID=NZ_CAJZAO010000252.1:1..5204;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_325 NZ_CAJZAO010000252.1 RefSeq gene 1 1834 . - . ID=gene-LDO50_RS19545;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=LDO50_RS19545;partial=true;start_range=.,1 NZ_CAJZAO010000252.1 Protein Homology CDS 1 1834 . - 0 ID=cds-WP_224020041.1;Parent=gene-LDO50_RS19545;Dbxref=GenBank:WP_224020041.1;Name=WP_224020041.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006050190.1;locus_tag=LDO50_RS19545;partial=true;product=aminopeptidase N;protein_id=WP_224020041.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000252.1 RefSeq gene 2021 2722 . + . ID=gene-LDO50_RS19550;Name=LDO50_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19550;old_locus_tag=BVI1335_3250002 NZ_CAJZAO010000252.1 Protein Homology CDS 2021 2722 . + 0 ID=cds-WP_011883763.1;Parent=gene-LDO50_RS19550;Dbxref=GenBank:WP_011883763.1;Name=WP_011883763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753214.1;locus_tag=LDO50_RS19550;product=DUF4136 domain-containing protein;protein_id=WP_011883763.1;transl_table=11 NZ_CAJZAO010000252.1 RefSeq gene 2787 3359 . - . ID=gene-LDO50_RS19555;Name=LDO50_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19555;old_locus_tag=BVI1335_3250003 NZ_CAJZAO010000252.1 Protein Homology CDS 2787 3359 . - 0 ID=cds-WP_014722657.1;Parent=gene-LDO50_RS19555;Dbxref=GenBank:WP_014722657.1;Name=WP_014722657.1;Ontology_term=GO:0030001,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189913.1;locus_tag=LDO50_RS19555;product=TMEM165/GDT1 family protein;protein_id=WP_014722657.1;transl_table=11 NZ_CAJZAO010000252.1 cmsearch riboswitch 3454 3575 . - . ID=id-NZ_CAJZAO010000252.1:3454..3575;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAO010000252.1 RefSeq gene 3668 4984 . - . ID=gene-LDO50_RS19560;Name=guaD;gbkey=Gene;gene=guaD;gene_biotype=protein_coding;locus_tag=LDO50_RS19560;old_locus_tag=BVI1335_3250005 NZ_CAJZAO010000252.1 Protein Homology CDS 3668 4984 . - 0 ID=cds-WP_014722658.1;Parent=gene-LDO50_RS19560;Dbxref=GenBank:WP_014722658.1;Name=WP_014722658.1;Ontology_term=GO:0006147,GO:0008270,GO:0008892;gbkey=CDS;gene=guaD;go_function=zinc ion binding|0008270||IEA,guanine deaminase activity|0008892||IEA;go_process=guanine catabolic process|0006147||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363320.1;locus_tag=LDO50_RS19560;product=guanine deaminase;protein_id=WP_014722658.1;transl_table=11 NZ_CAJZAO010000252.1 RefSeq gene 5001 5204 . - . ID=gene-LDO50_RS19565;Name=LDO50_RS19565;end_range=5204,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19565;partial=true NZ_CAJZAO010000252.1 GeneMarkS-2+ CDS 5001 5204 . - 0 ID=cds-WP_224020042.1;Parent=gene-LDO50_RS19565;Dbxref=GenBank:WP_224020042.1;Name=WP_224020042.1;end_range=5204,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS19565;partial=true;product=hypothetical protein;protein_id=WP_224020042.1;transl_table=11 ##sequence-region NZ_CAJZAO010000253.1 1 2441 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000253.1 RefSeq region 1 2441 . + . ID=NZ_CAJZAO010000253.1:1..2441;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_326 NZ_CAJZAO010000253.1 RefSeq gene 1 386 . + . ID=gene-LDO50_RS31850;Name=LDO50_RS31850;end_range=386,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31850;old_locus_tag=BVI1335_3260001;partial=true;start_range=.,1 NZ_CAJZAO010000253.1 Protein Homology CDS 1 386 . + 1 ID=cds-WP_443797828.1;Parent=gene-LDO50_RS31850;Dbxref=GenBank:WP_443797828.1;Name=WP_443797828.1;Ontology_term=GO:0009401,GO:0008982;end_range=386,.;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212677.1;locus_tag=LDO50_RS31850;partial=true;product=glucose PTS transporter subunit EIIB;protein_id=WP_443797828.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000253.1 RefSeq gene 397 855 . + . ID=gene-LDO50_RS31855;Name=LDO50_RS31855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31855;old_locus_tag=BVI1335_3260002;partial=true;start_range=.,397 NZ_CAJZAO010000253.1 Protein Homology CDS 397 855 . + 0 ID=cds-WP_443797829.1;Parent=gene-LDO50_RS31855;Dbxref=GenBank:WP_443797829.1;Name=WP_443797829.1;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602445.1;locus_tag=LDO50_RS31855;partial=true;product=PTS transporter subunit EIIB;protein_id=WP_443797829.1;start_range=.,397;transl_table=11 NZ_CAJZAO010000253.1 RefSeq gene 1040 2441 . - . ID=gene-LDO50_RS19575;Name=LDO50_RS19575;end_range=2441,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19575;old_locus_tag=BVI1335_3260003;partial=true NZ_CAJZAO010000253.1 Protein Homology CDS 1040 2441 . - 1 ID=cds-WP_224020043.1;Parent=gene-LDO50_RS19575;Dbxref=GenBank:WP_224020043.1;Name=WP_224020043.1;Ontology_term=GO:0005975,GO:0004553;end_range=2441,.;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006499030.1;locus_tag=LDO50_RS19575;partial=true;product=family 20 glycosylhydrolase;protein_id=WP_224020043.1;transl_table=11 ##sequence-region NZ_CAJZAO010000254.1 1 4652 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000254.1 RefSeq region 1 4652 . + . ID=NZ_CAJZAO010000254.1:1..4652;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_327 NZ_CAJZAO010000254.1 RefSeq gene 1 471 . - . ID=gene-LDO50_RS19580;Name=LDO50_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19580;partial=true;start_range=.,1 NZ_CAJZAO010000254.1 Protein Homology CDS 1 471 . - 0 ID=cds-WP_011880362.1;Parent=gene-LDO50_RS19580;Dbxref=GenBank:WP_011880362.1;Name=WP_011880362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880362.1;locus_tag=LDO50_RS19580;partial=true;product=hypothetical protein;protein_id=WP_011880362.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000254.1 RefSeq gene 936 1412 . + . ID=gene-LDO50_RS19590;Name=LDO50_RS19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19590;old_locus_tag=BVI1335_3270003 NZ_CAJZAO010000254.1 Protein Homology CDS 936 1412 . + 0 ID=cds-WP_011880364.1;Parent=gene-LDO50_RS19590;Dbxref=GenBank:WP_011880364.1;Name=WP_011880364.1;Ontology_term=GO:0042572,GO:0016746,GO:0047173;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,phosphatidylcholine-retinol O-acyltransferase activity|0047173||IEA;go_process=retinol metabolic process|0042572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726000.1;locus_tag=LDO50_RS19590;product=lecithin retinol acyltransferase family protein;protein_id=WP_011880364.1;transl_table=11 NZ_CAJZAO010000254.1 RefSeq gene 1426 1572 . - . ID=gene-LDO50_RS30870;Name=LDO50_RS30870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30870 NZ_CAJZAO010000254.1 GeneMarkS-2+ CDS 1426 1572 . - 0 ID=cds-WP_155121937.1;Parent=gene-LDO50_RS30870;Dbxref=GenBank:WP_155121937.1;Name=WP_155121937.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS30870;product=hypothetical protein;protein_id=WP_155121937.1;transl_table=11 NZ_CAJZAO010000254.1 RefSeq gene 1647 2903 . - . ID=gene-LDO50_RS19595;Name=LDO50_RS19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19595;old_locus_tag=BVI1335_3270004 NZ_CAJZAO010000254.1 Protein Homology CDS 1647 2903 . - 0 ID=cds-WP_224020044.1;Parent=gene-LDO50_RS19595;Dbxref=GenBank:WP_224020044.1;Name=WP_224020044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372538.1;locus_tag=LDO50_RS19595;product=putative glycoside hydrolase;protein_id=WP_224020044.1;transl_table=11 NZ_CAJZAO010000254.1 RefSeq gene 2896 3693 . - . ID=gene-LDO50_RS19600;Name=LDO50_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19600;old_locus_tag=BVI1335_3270005 NZ_CAJZAO010000254.1 Protein Homology CDS 2896 3693 . - 0 ID=cds-WP_043292683.1;Parent=gene-LDO50_RS19600;Dbxref=GenBank:WP_043292683.1;Name=WP_043292683.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726006.1;locus_tag=LDO50_RS19600;product=polysaccharide deacetylase family protein;protein_id=WP_043292683.1;transl_table=11 NZ_CAJZAO010000254.1 RefSeq gene 3772 4652 . - . ID=gene-LDO50_RS19605;Name=LDO50_RS19605;end_range=4652,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19605;old_locus_tag=BVI1335_3270006;partial=true NZ_CAJZAO010000254.1 Protein Homology CDS 3772 4652 . - 2 ID=cds-WP_224020045.1;Parent=gene-LDO50_RS19605;Dbxref=GenBank:WP_224020045.1;Name=WP_224020045.1;Ontology_term=GO:0016310,GO:0005524,GO:0008443;end_range=4652,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphofructokinase activity|0008443||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488382.1;locus_tag=LDO50_RS19605;partial=true;product=1-phosphofructokinase family hexose kinase;protein_id=WP_224020045.1;transl_table=11 ##sequence-region NZ_CAJZAO010000255.1 1 2751 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000255.1 RefSeq region 1 2751 . + . ID=NZ_CAJZAO010000255.1:1..2751;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_328 NZ_CAJZAO010000255.1 RefSeq gene 86 880 . - . ID=gene-LDO50_RS19610;Name=LDO50_RS19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19610;old_locus_tag=BVI1335_3280001 NZ_CAJZAO010000255.1 Protein Homology CDS 86 880 . - 0 ID=cds-WP_059494738.1;Parent=gene-LDO50_RS19610;Dbxref=GenBank:WP_059494738.1;Name=WP_059494738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756495.1;locus_tag=LDO50_RS19610;product=OmpA family protein;protein_id=WP_059494738.1;transl_table=11 NZ_CAJZAO010000255.1 RefSeq gene 990 2751 . - . ID=gene-LDO50_RS19615;Name=LDO50_RS19615;end_range=2751,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19615;old_locus_tag=BVI1335_3280002;partial=true NZ_CAJZAO010000255.1 Protein Homology CDS 990 2751 . - 1 ID=cds-WP_224020046.1;Parent=gene-LDO50_RS19615;Dbxref=GenBank:WP_224020046.1;Name=WP_224020046.1;Ontology_term=GO:0007155,GO:0015031;end_range=2751,.;gbkey=CDS;go_process=cell adhesion|0007155||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756494.1;locus_tag=LDO50_RS19615;partial=true;product=YadA family autotransporter adhesin;protein_id=WP_224020046.1;transl_table=11 ##sequence-region NZ_CAJZAO010000256.1 1 2724 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000256.1 RefSeq region 1 2724 . + . ID=NZ_CAJZAO010000256.1:1..2724;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_329 NZ_CAJZAO010000256.1 RefSeq gene 1 283 . - . ID=gene-LDO50_RS31860;Name=LDO50_RS31860;end_range=283,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31860;partial=true;start_range=.,1 NZ_CAJZAO010000256.1 Protein Homology CDS 1 283 . - 0 ID=cds-WP_443797830.1;Parent=gene-LDO50_RS31860;Dbxref=GenBank:WP_443797830.1;Name=WP_443797830.1;Ontology_term=GO:0016491;end_range=283,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398083.1;locus_tag=LDO50_RS31860;partial=true;product=molybdopterin cofactor-binding domain-containing protein;protein_id=WP_443797830.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000256.1 RefSeq gene 294 1182 . - . ID=gene-LDO50_RS19620;Name=LDO50_RS19620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19620;partial=true;start_range=.,294 NZ_CAJZAO010000256.1 Protein Homology CDS 294 1182 . - 0 ID=cds-WP_443797831.1;Parent=gene-LDO50_RS19620;Dbxref=GenBank:WP_443797831.1;Name=WP_443797831.1;Ontology_term=GO:0043546;gbkey=CDS;go_function=molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017777478.1;locus_tag=LDO50_RS19620;partial=true;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;protein_id=WP_443797831.1;start_range=.,294;transl_table=11 NZ_CAJZAO010000256.1 RefSeq gene 1179 2177 . - . ID=gene-LDO50_RS19625;Name=LDO50_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19625;old_locus_tag=BVI1335_3290003 NZ_CAJZAO010000256.1 Protein Homology CDS 1179 2177 . - 0 ID=cds-WP_224020047.1;Parent=gene-LDO50_RS19625;Dbxref=GenBank:WP_224020047.1;Name=WP_224020047.1;Ontology_term=GO:0050660,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364849.1;locus_tag=LDO50_RS19625;product=FAD binding domain-containing protein;protein_id=WP_224020047.1;transl_table=11 NZ_CAJZAO010000256.1 RefSeq gene 2196 2724 . - . ID=gene-LDO50_RS19630;Name=LDO50_RS19630;end_range=2724,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19630;old_locus_tag=BVI1335_3290004;partial=true NZ_CAJZAO010000256.1 Protein Homology CDS 2196 2724 . - 1 ID=cds-WP_224020048.1;Parent=gene-LDO50_RS19630;Dbxref=GenBank:WP_224020048.1;Name=WP_224020048.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;end_range=2724,.;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407131.1;locus_tag=LDO50_RS19630;partial=true;product=(2Fe-2S)-binding protein;protein_id=WP_224020048.1;transl_table=11 ##sequence-region NZ_CAJZAO010000257.1 1 11778 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000257.1 RefSeq region 1 11778 . + . ID=NZ_CAJZAO010000257.1:1..11778;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_33 NZ_CAJZAO010000257.1 RefSeq gene 1 278 . + . ID=gene-LDO50_RS19635;Name=LDO50_RS19635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19635;old_locus_tag=BVI1335_330001;partial=true;start_range=.,1 NZ_CAJZAO010000257.1 Protein Homology CDS 1 278 . + 2 ID=cds-WP_224020049.1;Parent=gene-LDO50_RS19635;Dbxref=GenBank:WP_224020049.1;Name=WP_224020049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406484.1;locus_tag=LDO50_RS19635;partial=true;product=ATP-binding protein;protein_id=WP_224020049.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000257.1 RefSeq gene 379 1863 . + . ID=gene-LDO50_RS19640;Name=LDO50_RS19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19640;old_locus_tag=BVI1335_330002 NZ_CAJZAO010000257.1 Protein Homology CDS 379 1863 . + 0 ID=cds-WP_059735405.1;Parent=gene-LDO50_RS19640;Dbxref=GenBank:WP_059735405.1;Name=WP_059735405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398419.1;locus_tag=LDO50_RS19640;product=DegQ family serine endoprotease;protein_id=WP_059735405.1;transl_table=11 NZ_CAJZAO010000257.1 RefSeq gene 1969 2406 . + . ID=gene-LDO50_RS19645;Name=LDO50_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19645;old_locus_tag=BVI1335_330003 NZ_CAJZAO010000257.1 Protein Homology CDS 1969 2406 . + 0 ID=cds-WP_011885897.1;Parent=gene-LDO50_RS19645;Dbxref=GenBank:WP_011885897.1;Name=WP_011885897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406482.1;locus_tag=LDO50_RS19645;product=carboxypeptidase-like regulatory domain-containing protein;protein_id=WP_011885897.1;transl_table=11 NZ_CAJZAO010000257.1 RefSeq gene 2536 2895 . + . ID=gene-LDO50_RS19650;Name=LDO50_RS19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19650;old_locus_tag=BVI1335_330004 NZ_CAJZAO010000257.1 Protein Homology CDS 2536 2895 . + 0 ID=cds-WP_011885896.1;Parent=gene-LDO50_RS19650;Dbxref=GenBank:WP_011885896.1;Name=WP_011885896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414694.1;locus_tag=LDO50_RS19650;product=DUF427 domain-containing protein;protein_id=WP_011885896.1;transl_table=11 NZ_CAJZAO010000257.1 RefSeq gene 2924 3616 . + . ID=gene-LDO50_RS19655;Name=LDO50_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19655;old_locus_tag=BVI1335_330005 NZ_CAJZAO010000257.1 Protein Homology CDS 2924 3616 . + 0 ID=cds-WP_059897527.1;Parent=gene-LDO50_RS19655;Dbxref=GenBank:WP_059897527.1;Name=WP_059897527.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554577.1;locus_tag=LDO50_RS19655;product=CoxG family protein;protein_id=WP_059897527.1;transl_table=11 NZ_CAJZAO010000257.1 RefSeq gene 3743 3952 . + . ID=gene-LDO50_RS19660;Name=LDO50_RS19660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19660;old_locus_tag=BVI1335_330006 NZ_CAJZAO010000257.1 Protein Homology CDS 3743 3952 . + 0 ID=cds-WP_011885894.1;Parent=gene-LDO50_RS19660;Dbxref=GenBank:WP_011885894.1;Name=WP_011885894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885894.1;locus_tag=LDO50_RS19660;product=hypothetical protein;protein_id=WP_011885894.1;transl_table=11 NZ_CAJZAO010000257.1 RefSeq gene 3961 4962 . - . ID=gene-LDO50_RS19665;Name=LDO50_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19665;old_locus_tag=BVI1335_330007 NZ_CAJZAO010000257.1 Protein Homology CDS 3961 4962 . - 0 ID=cds-WP_011885893.1;Parent=gene-LDO50_RS19665;Dbxref=GenBank:WP_011885893.1;Name=WP_011885893.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364600.1;locus_tag=LDO50_RS19665;product=helix-turn-helix domain-containing protein;protein_id=WP_011885893.1;transl_table=11 NZ_CAJZAO010000257.1 RefSeq gene 5115 5780 . + . ID=gene-LDO50_RS19670;Name=LDO50_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19670;old_locus_tag=BVI1335_330008 NZ_CAJZAO010000257.1 Protein Homology CDS 5115 5780 . + 0 ID=cds-WP_014723558.1;Parent=gene-LDO50_RS19670;Dbxref=GenBank:WP_014723558.1;Name=WP_014723558.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546095.1;locus_tag=LDO50_RS19670;product=cysteine hydrolase family protein;protein_id=WP_014723558.1;transl_table=11 NZ_CAJZAO010000257.1 RefSeq gene 5897 6538 . - . ID=gene-LDO50_RS19675;Name=LDO50_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19675;old_locus_tag=BVI1335_330009 NZ_CAJZAO010000257.1 Protein Homology CDS 5897 6538 . - 0 ID=cds-WP_011885891.1;Parent=gene-LDO50_RS19675;Dbxref=GenBank:WP_011885891.1;Name=WP_011885891.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885891.1;locus_tag=LDO50_RS19675;product=TetR family transcriptional regulator;protein_id=WP_011885891.1;transl_table=11 NZ_CAJZAO010000257.1 RefSeq gene 6942 8198 . + . ID=gene-LDO50_RS19680;Name=LDO50_RS19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19680;old_locus_tag=BVI1335_330010 NZ_CAJZAO010000257.1 Protein Homology CDS 6942 8198 . + 0 ID=cds-WP_011885890.1;Parent=gene-LDO50_RS19680;Dbxref=GenBank:WP_011885890.1;Name=WP_011885890.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197561.1;locus_tag=LDO50_RS19680;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_011885890.1;transl_table=11 NZ_CAJZAO010000257.1 RefSeq gene 8214 11414 . + . ID=gene-LDO50_RS19685;Name=bpeB;gbkey=Gene;gene=bpeB;gene_biotype=protein_coding;locus_tag=LDO50_RS19685;old_locus_tag=BVI1335_330011 NZ_CAJZAO010000257.1 Protein Homology CDS 8214 11414 . + 0 ID=cds-WP_011885889.1;Parent=gene-LDO50_RS19685;Dbxref=GenBank:WP_011885889.1;Name=WP_011885889.1;gbkey=CDS;gene=bpeB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398428.1;locus_tag=LDO50_RS19685;product=efflux RND transporter permease BpeB;protein_id=WP_011885889.1;transl_table=11 NZ_CAJZAO010000257.1 RefSeq gene 11414 11778 . + . ID=gene-LDO50_RS19690;Name=LDO50_RS19690;end_range=11778,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19690;partial=true NZ_CAJZAO010000257.1 Protein Homology CDS 11414 11778 . + 0 ID=cds-WP_224020050.1;Parent=gene-LDO50_RS19690;Dbxref=GenBank:WP_224020050.1;Name=WP_224020050.1;Ontology_term=GO:0055085,GO:0015562;end_range=11778,.;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212800.1;locus_tag=LDO50_RS19690;partial=true;product=TolC family protein;protein_id=WP_224020050.1;transl_table=11 ##sequence-region NZ_CAJZAO010000258.1 1 4695 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000258.1 RefSeq region 1 4695 . + . ID=NZ_CAJZAO010000258.1:1..4695;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_330 NZ_CAJZAO010000258.1 RefSeq gene 171 503 . - . ID=gene-LDO50_RS19695;Name=LDO50_RS19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19695;old_locus_tag=BVI1335_3300001 NZ_CAJZAO010000258.1 Protein Homology CDS 171 503 . - 0 ID=cds-WP_011886299.1;Parent=gene-LDO50_RS19695;Dbxref=GenBank:WP_011886299.1;Name=WP_011886299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197170.1;locus_tag=LDO50_RS19695;product=flagellar protein FliT;protein_id=WP_011886299.1;transl_table=11 NZ_CAJZAO010000258.1 RefSeq gene 500 934 . - . ID=gene-LDO50_RS19700;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=LDO50_RS19700;old_locus_tag=BVI1335_3300002 NZ_CAJZAO010000258.1 Protein Homology CDS 500 934 . - 0 ID=cds-WP_011886300.1;Parent=gene-LDO50_RS19700;Dbxref=GenBank:WP_011886300.1;Name=WP_011886300.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203429.1;locus_tag=LDO50_RS19700;product=flagellar export chaperone FliS;protein_id=WP_011886300.1;transl_table=11 NZ_CAJZAO010000258.1 RefSeq gene 1068 1412 . - . ID=gene-LDO50_RS19705;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=LDO50_RS19705;old_locus_tag=BVI1335_3300003 NZ_CAJZAO010000258.1 Protein Homology CDS 1068 1412 . - 0 ID=cds-WP_011886301.1;Parent=gene-LDO50_RS19705;Dbxref=GenBank:WP_011886301.1;Name=WP_011886301.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761724.1;locus_tag=LDO50_RS19705;product=flagellar hook-basal body complex protein FliE;protein_id=WP_011886301.1;transl_table=11 NZ_CAJZAO010000258.1 RefSeq gene 1661 3424 . + . ID=gene-LDO50_RS19710;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=LDO50_RS19710;old_locus_tag=BVI1335_3300004 NZ_CAJZAO010000258.1 Protein Homology CDS 1661 3424 . + 0 ID=cds-WP_014723838.1;Parent=gene-LDO50_RS19710;Dbxref=GenBank:WP_014723838.1;Name=WP_014723838.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197168.1;locus_tag=LDO50_RS19710;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_014723838.1;transl_table=11 NZ_CAJZAO010000258.1 RefSeq gene 3414 4409 . + . ID=gene-LDO50_RS19715;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=LDO50_RS19715;old_locus_tag=BVI1335_3300005 NZ_CAJZAO010000258.1 Protein Homology CDS 3414 4409 . + 0 ID=cds-WP_011886303.1;Parent=gene-LDO50_RS19715;Dbxref=GenBank:WP_011886303.1;Name=WP_011886303.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334572.1;locus_tag=LDO50_RS19715;product=flagellar motor switch protein FliG;protein_id=WP_011886303.1;transl_table=11 NZ_CAJZAO010000258.1 RefSeq pseudogene 4402 4695 . + . ID=gene-LDO50_RS19720;Name=LDO50_RS19720;end_range=4695,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS19720;partial=true;pseudo=true NZ_CAJZAO010000258.1 Protein Homology CDS 4402 4695 . + 0 ID=cds-LDO50_RS19720;Parent=gene-LDO50_RS19720;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4695,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525877.1;locus_tag=LDO50_RS19720;partial=true;product=flagellar assembly protein FliH;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000259.1 1 566 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000259.1 RefSeq region 1 566 . + . ID=NZ_CAJZAO010000259.1:1..566;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_331 NZ_CAJZAO010000259.1 RefSeq pseudogene 1 134 . - . ID=gene-LDO50_RS19725;Name=LDO50_RS19725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS19725;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000259.1 Protein Homology CDS 1 134 . - 0 ID=cds-LDO50_RS19725;Parent=gene-LDO50_RS19725;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189890.1;locus_tag=LDO50_RS19725;partial=true;product=electron transfer flavoprotein subunit alpha/FixB family protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000259.1 RefSeq gene 151 408 . - . ID=gene-LDO50_RS31865;Name=LDO50_RS31865;end_range=408,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31865;old_locus_tag=BVI1335_3310002;partial=true NZ_CAJZAO010000259.1 Protein Homology CDS 151 408 . - 0 ID=cds-WP_443797832.1;Parent=gene-LDO50_RS31865;Dbxref=GenBank:WP_443797832.1;Name=WP_443797832.1;Ontology_term=GO:0009055;end_range=408,.;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189750.1;locus_tag=LDO50_RS31865;partial=true;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_443797832.1;transl_table=11 NZ_CAJZAO010000259.1 RefSeq pseudogene 419 566 . - . ID=gene-LDO50_RS31870;Name=LDO50_RS31870;end_range=566,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31870;old_locus_tag=BVI1335_3310003;partial=true;pseudo=true;start_range=.,419 NZ_CAJZAO010000259.1 Protein Homology CDS 419 566 . - 2 ID=cds-LDO50_RS31870;Parent=gene-LDO50_RS31870;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=566,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189750.1;locus_tag=LDO50_RS31870;partial=true;product=electron transfer flavoprotein subunit beta/FixA family protein;pseudo=true;start_range=.,419;transl_table=11 ##sequence-region NZ_CAJZAO010000260.1 1 456 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000260.1 RefSeq region 1 456 . + . ID=NZ_CAJZAO010000260.1:1..456;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_332 NZ_CAJZAO010000260.1 RefSeq pseudogene 133 293 . + . ID=gene-LDO50_RS31875;Name=LDO50_RS31875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31875;partial=true;pseudo=true;start_range=.,133 NZ_CAJZAO010000260.1 Protein Homology CDS 133 293 . + 2 ID=cds-LDO50_RS31875;Parent=gene-LDO50_RS31875;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899135.1;locus_tag=LDO50_RS31875;partial=true;product=PLP-dependent aminotransferase family protein;pseudo=true;start_range=.,133;transl_table=11 ##sequence-region NZ_CAJZAO010000261.1 1 2189 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000261.1 RefSeq region 1 2189 . + . ID=NZ_CAJZAO010000261.1:1..2189;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_333 NZ_CAJZAO010000261.1 RefSeq gene 367 543 . - . ID=gene-LDO50_RS19740;Name=LDO50_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19740;old_locus_tag=BVI1335_3330003 NZ_CAJZAO010000261.1 GeneMarkS-2+ CDS 367 543 . - 0 ID=cds-WP_224020051.1;Parent=gene-LDO50_RS19740;Dbxref=GenBank:WP_224020051.1;Name=WP_224020051.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS19740;product=hypothetical protein;protein_id=WP_224020051.1;transl_table=11 NZ_CAJZAO010000261.1 RefSeq pseudogene 746 1132 . - . ID=gene-LDO50_RS31880;Name=LDO50_RS31880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31880;old_locus_tag=BVI1335_3330005;partial=true;pseudo=true;start_range=.,746 NZ_CAJZAO010000261.1 Protein Homology CDS 746 1132 . - 0 ID=cds-LDO50_RS31880;Parent=gene-LDO50_RS31880;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881021.1;locus_tag=LDO50_RS31880;partial=true;product=hypothetical protein;pseudo=true;start_range=.,746;transl_table=11 NZ_CAJZAO010000261.1 RefSeq gene 1419 1641 . - . ID=gene-LDO50_RS19745;Name=LDO50_RS19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19745;old_locus_tag=BVI1335_3330006;partial=true;start_range=.,1419 NZ_CAJZAO010000261.1 Protein Homology CDS 1419 1641 . - 0 ID=cds-WP_224020052.1;Parent=gene-LDO50_RS19745;Dbxref=GenBank:WP_224020052.1;Name=WP_224020052.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012422.6;locus_tag=LDO50_RS19745;partial=true;product=response regulator transcription factor;protein_id=WP_224020052.1;start_range=.,1419;transl_table=11 NZ_CAJZAO010000261.1 RefSeq gene 2061 2189 . - . ID=gene-LDO50_RS19750;Name=LDO50_RS19750;end_range=2189,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19750;partial=true NZ_CAJZAO010000261.1 Protein Homology CDS 2061 2189 . - 0 ID=cds-WP_224020053.1;Parent=gene-LDO50_RS19750;Dbxref=GenBank:WP_224020053.1;Name=WP_224020053.1;end_range=2189,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090131.1;locus_tag=LDO50_RS19750;partial=true;product=2-methylaconitate cis-trans isomerase PrpF family protein;protein_id=WP_224020053.1;transl_table=11 ##sequence-region NZ_CAJZAO010000262.1 1 1683 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000262.1 RefSeq region 1 1683 . + . ID=NZ_CAJZAO010000262.1:1..1683;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_334 NZ_CAJZAO010000262.1 RefSeq gene 24 341 . + . ID=gene-LDO50_RS19755;Name=LDO50_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19755;old_locus_tag=BVI1335_3340001 NZ_CAJZAO010000262.1 Protein Homology CDS 24 341 . + 0 ID=cds-WP_011886145.1;Parent=gene-LDO50_RS19755;Dbxref=GenBank:WP_011886145.1;Name=WP_011886145.1;Ontology_term=GO:0009055,GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090546.1;locus_tag=LDO50_RS19755;product=(2Fe-2S) ferredoxin domain-containing protein;protein_id=WP_011886145.1;transl_table=11 NZ_CAJZAO010000262.1 RefSeq gene 355 999 . + . ID=gene-LDO50_RS19760;Name=LDO50_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19760;old_locus_tag=BVI1335_3340002 NZ_CAJZAO010000262.1 Protein Homology CDS 355 999 . + 0 ID=cds-WP_059568255.1;Parent=gene-LDO50_RS19760;Dbxref=GenBank:WP_059568255.1;Name=WP_059568255.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908400.1;locus_tag=LDO50_RS19760;product=alpha/beta hydrolase;protein_id=WP_059568255.1;transl_table=11 ##sequence-region NZ_CAJZAO010000263.1 1 4551 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000263.1 RefSeq region 1 4551 . + . ID=NZ_CAJZAO010000263.1:1..4551;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_335 NZ_CAJZAO010000263.1 RefSeq gene 205 807 . + . ID=gene-LDO50_RS19765;Name=LDO50_RS19765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19765;old_locus_tag=BVI1335_3350001 NZ_CAJZAO010000263.1 Protein Homology CDS 205 807 . + 0 ID=cds-WP_034192636.1;Parent=gene-LDO50_RS19765;Dbxref=GenBank:WP_034192636.1;Name=WP_034192636.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723509.1;locus_tag=LDO50_RS19765;product=class I SAM-dependent methyltransferase;protein_id=WP_034192636.1;transl_table=11 NZ_CAJZAO010000263.1 RefSeq gene 823 2097 . - . ID=gene-LDO50_RS19770;Name=LDO50_RS19770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19770;old_locus_tag=BVI1335_3350002 NZ_CAJZAO010000263.1 Protein Homology CDS 823 2097 . - 0 ID=cds-WP_011885794.1;Parent=gene-LDO50_RS19770;Dbxref=GenBank:WP_011885794.1;Name=WP_011885794.1;Ontology_term=GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885794.1;locus_tag=LDO50_RS19770;product=EAL domain-containing protein;protein_id=WP_011885794.1;transl_table=11 NZ_CAJZAO010000263.1 RefSeq gene 2320 3759 . - . ID=gene-LDO50_RS19775;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=LDO50_RS19775;old_locus_tag=BVI1335_3350003 NZ_CAJZAO010000263.1 Protein Homology CDS 2320 3759 . - 0 ID=cds-WP_059668179.1;Parent=gene-LDO50_RS19775;Dbxref=GenBank:WP_059668179.1;Name=WP_059668179.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329084.1;locus_tag=LDO50_RS19775;product=multidrug transporter subunit MdtD;protein_id=WP_059668179.1;transl_table=11 NZ_CAJZAO010000263.1 RefSeq gene 3971 4294 . + . ID=gene-LDO50_RS19780;Name=LDO50_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19780;old_locus_tag=BVI1335_3350004 NZ_CAJZAO010000263.1 Protein Homology CDS 3971 4294 . + 0 ID=cds-WP_014723505.1;Parent=gene-LDO50_RS19780;Dbxref=GenBank:WP_014723505.1;Name=WP_014723505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755900.1;locus_tag=LDO50_RS19780;product=DUF2917 domain-containing protein;protein_id=WP_014723505.1;transl_table=11 NZ_CAJZAO010000263.1 RefSeq gene 4267 4551 . - . ID=gene-LDO50_RS19785;Name=LDO50_RS19785;end_range=4551,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19785;partial=true NZ_CAJZAO010000263.1 Protein Homology CDS 4267 4551 . - 0 ID=cds-WP_290370761.1;Parent=gene-LDO50_RS19785;Dbxref=GenBank:WP_290370761.1;Name=WP_290370761.1;Ontology_term=GO:0046912;end_range=4551,.;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723504.1;locus_tag=LDO50_RS19785;partial=true;product=citrate/2-methylcitrate synthase;protein_id=WP_290370761.1;transl_table=11 ##sequence-region NZ_CAJZAO010000264.1 1 1910 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000264.1 RefSeq region 1 1910 . + . ID=NZ_CAJZAO010000264.1:1..1910;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_336 NZ_CAJZAO010000264.1 RefSeq gene 1 477 . - . ID=gene-LDO50_RS19790;Name=LDO50_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19790;partial=true;start_range=.,1 NZ_CAJZAO010000264.1 Protein Homology CDS 1 477 . - 0 ID=cds-WP_224020054.1;Parent=gene-LDO50_RS19790;Dbxref=GenBank:WP_224020054.1;Name=WP_224020054.1;Ontology_term=GO:0001561,GO:0102672,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fatty acid alpha-dioxygenase activity|0102672||IEA;go_process=fatty acid alpha-oxidation|0001561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602466.1;locus_tag=LDO50_RS19790;partial=true;product=Mpo1 family 2-hydroxy fatty acid dioxygenase;protein_id=WP_224020054.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000264.1 RefSeq gene 559 1266 . + . ID=gene-LDO50_RS19795;Name=LDO50_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19795;old_locus_tag=BVI1335_3360002 NZ_CAJZAO010000264.1 Protein Homology CDS 559 1266 . + 0 ID=cds-WP_059894215.1;Parent=gene-LDO50_RS19795;Dbxref=GenBank:WP_059894215.1;Name=WP_059894215.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885797.1;locus_tag=LDO50_RS19795;product=Crp/Fnr family transcriptional regulator;protein_id=WP_059894215.1;transl_table=11 NZ_CAJZAO010000264.1 RefSeq gene 1393 1780 . + . ID=gene-LDO50_RS19800;Name=LDO50_RS19800;end_range=1780,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19800;old_locus_tag=BVI1335_3360003;partial=true NZ_CAJZAO010000264.1 Protein Homology CDS 1393 1780 . + 0 ID=cds-WP_443797833.1;Parent=gene-LDO50_RS19800;Dbxref=GenBank:WP_443797833.1;Name=WP_443797833.1;Ontology_term=GO:0015703,GO:0015109;end_range=1780,.;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885798.1;locus_tag=LDO50_RS19800;partial=true;product=chromate transporter;protein_id=WP_443797833.1;transl_table=11 ##sequence-region NZ_CAJZAO010000265.1 1 2735 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000265.1 RefSeq region 1 2735 . + . ID=NZ_CAJZAO010000265.1:1..2735;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_337 NZ_CAJZAO010000265.1 RefSeq gene 1 667 . + . ID=gene-LDO50_RS19805;Name=LDO50_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19805;old_locus_tag=BVI1335_3370001;partial=true;start_range=.,1 NZ_CAJZAO010000265.1 Protein Homology CDS 1 667 . + 1 ID=cds-WP_224020055.1;Parent=gene-LDO50_RS19805;Dbxref=GenBank:WP_224020055.1;Name=WP_224020055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882028.1;locus_tag=LDO50_RS19805;partial=true;product=transcriptional regulator;protein_id=WP_224020055.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000265.1 RefSeq gene 746 1732 . + . ID=gene-LDO50_RS19810;Name=pcaQ;gbkey=Gene;gene=pcaQ;gene_biotype=protein_coding;locus_tag=LDO50_RS19810;old_locus_tag=BVI1335_3370002 NZ_CAJZAO010000265.1 Protein Homology CDS 746 1732 . + 0 ID=cds-WP_011882029.1;Parent=gene-LDO50_RS19810;Dbxref=GenBank:WP_011882029.1;Name=WP_011882029.1;Ontology_term=GO:0019619,GO:0045893,GO:0003677;gbkey=CDS;gene=pcaQ;go_function=DNA binding|0003677||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA,positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495024.1;locus_tag=LDO50_RS19810;product=pca operon transcription factor PcaQ;protein_id=WP_011882029.1;transl_table=11 NZ_CAJZAO010000265.1 RefSeq gene 1954 2735 . - . ID=gene-LDO50_RS19815;Name=LDO50_RS19815;end_range=2735,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19815;old_locus_tag=BVI1335_3370003;partial=true NZ_CAJZAO010000265.1 Protein Homology CDS 1954 2735 . - 2 ID=cds-WP_224020056.1;Parent=gene-LDO50_RS19815;Dbxref=GenBank:WP_224020056.1;Name=WP_224020056.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=2735,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725033.1;locus_tag=LDO50_RS19815;partial=true;product=amino acid permease;protein_id=WP_224020056.1;transl_table=11 ##sequence-region NZ_CAJZAO010000266.1 1 1765 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000266.1 RefSeq region 1 1765 . + . ID=NZ_CAJZAO010000266.1:1..1765;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_338 NZ_CAJZAO010000266.1 RefSeq gene 1 126 . - . ID=gene-LDO50_RS19820;Name=LDO50_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19820;partial=true;start_range=.,1 NZ_CAJZAO010000266.1 Protein Homology CDS 1 126 . - 0 ID=cds-WP_244141753.1;Parent=gene-LDO50_RS19820;Dbxref=GenBank:WP_244141753.1;Name=WP_244141753.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012081251.1;locus_tag=LDO50_RS19820;partial=true;product=GTP-binding protein;protein_id=WP_244141753.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000266.1 RefSeq gene 192 266 . - . ID=gene-LDO50_RS19825;Name=LDO50_RS19825;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS19825;old_locus_tag=BVI1335_TRNA24 NZ_CAJZAO010000266.1 tRNAscan-SE tRNA 192 266 . - . ID=rna-LDO50_RS19825;Parent=gene-LDO50_RS19825;anticodon=(pos:complement(232..234));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS19825;product=tRNA-Thr NZ_CAJZAO010000266.1 tRNAscan-SE exon 192 266 . - . ID=exon-LDO50_RS19825-1;Parent=rna-LDO50_RS19825;anticodon=(pos:complement(232..234));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS19825;product=tRNA-Thr NZ_CAJZAO010000266.1 RefSeq gene 291 364 . - . ID=gene-LDO50_RS19830;Name=LDO50_RS19830;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS19830;old_locus_tag=BVI1335_TRNA23 NZ_CAJZAO010000266.1 tRNAscan-SE tRNA 291 364 . - . ID=rna-LDO50_RS19830;Parent=gene-LDO50_RS19830;anticodon=(pos:complement(330..332));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS19830;product=tRNA-Gly NZ_CAJZAO010000266.1 tRNAscan-SE exon 291 364 . - . ID=exon-LDO50_RS19830-1;Parent=rna-LDO50_RS19830;anticodon=(pos:complement(330..332));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS19830;product=tRNA-Gly NZ_CAJZAO010000266.1 RefSeq gene 408 493 . - . ID=gene-LDO50_RS19835;Name=LDO50_RS19835;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS19835;old_locus_tag=BVI1335_TRNA22 NZ_CAJZAO010000266.1 tRNAscan-SE tRNA 408 493 . - . ID=rna-LDO50_RS19835;Parent=gene-LDO50_RS19835;anticodon=(pos:complement(457..459));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS19835;product=tRNA-Tyr NZ_CAJZAO010000266.1 tRNAscan-SE exon 408 493 . - . ID=exon-LDO50_RS19835-1;Parent=rna-LDO50_RS19835;anticodon=(pos:complement(457..459));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS19835;product=tRNA-Tyr ##sequence-region NZ_CAJZAO010000267.1 1 619 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000267.1 RefSeq region 1 619 . + . ID=NZ_CAJZAO010000267.1:1..619;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_339 NZ_CAJZAO010000267.1 RefSeq pseudogene 1 121 . - . ID=gene-LDO50_RS31885;Name=LDO50_RS31885;end_range=121,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31885;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000267.1 Protein Homology CDS 1 121 . - 1 ID=cds-LDO50_RS31885;Parent=gene-LDO50_RS31885;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=121,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896040.1;locus_tag=LDO50_RS31885;partial=true;product=beta-ketoacyl-[acyl-carrier-protein] synthase II;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000267.1 RefSeq gene 132 619 . - . ID=gene-LDO50_RS19845;Name=LDO50_RS19845;end_range=619,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19845;old_locus_tag=BVI1335_3390002;partial=true;start_range=.,132 NZ_CAJZAO010000267.1 Protein Homology CDS 132 619 . - 1 ID=cds-WP_443797834.1;Parent=gene-LDO50_RS19845;Dbxref=GenBank:WP_443797834.1;Name=WP_443797834.1;end_range=619,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012761120.1;locus_tag=LDO50_RS19845;partial=true;product=beta-ketoacyl synthase N-terminal-like domain-containing protein;protein_id=WP_443797834.1;start_range=.,132;transl_table=11 ##sequence-region NZ_CAJZAO010000268.1 1 20916 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000268.1 RefSeq region 1 20916 . + . ID=NZ_CAJZAO010000268.1:1..20916;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_34 NZ_CAJZAO010000268.1 RefSeq gene 1 955 . + . ID=gene-LDO50_RS19850;Name=LDO50_RS19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19850;old_locus_tag=BVI1335_340001;partial=true;start_range=.,1 NZ_CAJZAO010000268.1 Protein Homology CDS 1 955 . + 1 ID=cds-WP_253074465.1;Parent=gene-LDO50_RS19850;Dbxref=GenBank:WP_253074465.1;Name=WP_253074465.1;Ontology_term=GO:0015103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=inorganic anion transmembrane transporter activity|0015103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723364.1;locus_tag=LDO50_RS19850;partial=true;product=SulP family inorganic anion transporter;protein_id=WP_253074465.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000268.1 RefSeq gene 1028 2572 . - . ID=gene-LDO50_RS19855;Name=LDO50_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19855;old_locus_tag=BVI1335_340002 NZ_CAJZAO010000268.1 Protein Homology CDS 1028 2572 . - 0 ID=cds-WP_045578922.1;Parent=gene-LDO50_RS19855;Dbxref=GenBank:WP_045578922.1;Name=WP_045578922.1;Ontology_term=GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398785.1;locus_tag=LDO50_RS19855;product=2-isopropylmalate synthase;protein_id=WP_045578922.1;transl_table=11 NZ_CAJZAO010000268.1 RefSeq gene 2894 3766 . - . ID=gene-LDO50_RS19860;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=LDO50_RS19860;old_locus_tag=BVI1335_340003 NZ_CAJZAO010000268.1 Protein Homology CDS 2894 3766 . - 0 ID=cds-WP_011885545.1;Parent=gene-LDO50_RS19860;Dbxref=GenBank:WP_011885545.1;Name=WP_011885545.1;Ontology_term=GO:0008654,GO:0003882;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-serine O-phosphatidyltransferase activity|0003882||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186682.1;locus_tag=LDO50_RS19860;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_011885545.1;transl_table=11 NZ_CAJZAO010000268.1 RefSeq gene 3782 4426 . - . ID=gene-LDO50_RS19865;Name=LDO50_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19865;old_locus_tag=BVI1335_340004 NZ_CAJZAO010000268.1 Protein Homology CDS 3782 4426 . - 0 ID=cds-WP_011885546.1;Parent=gene-LDO50_RS19865;Dbxref=GenBank:WP_011885546.1;Name=WP_011885546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331633.1;locus_tag=LDO50_RS19865;product=phosphatidylserine decarboxylase;protein_id=WP_011885546.1;transl_table=11 NZ_CAJZAO010000268.1 RefSeq gene 4554 5570 . - . ID=gene-LDO50_RS19870;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=LDO50_RS19870;old_locus_tag=BVI1335_340005 NZ_CAJZAO010000268.1 Protein Homology CDS 4554 5570 . - 0 ID=cds-WP_006478252.1;Parent=gene-LDO50_RS19870;Dbxref=GenBank:WP_006478252.1;Name=WP_006478252.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011902902.1;locus_tag=LDO50_RS19870;product=ketol-acid reductoisomerase;protein_id=WP_006478252.1;transl_table=11 NZ_CAJZAO010000268.1 RefSeq gene 5676 6167 . - . ID=gene-LDO50_RS19875;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=LDO50_RS19875;old_locus_tag=BVI1335_340006 NZ_CAJZAO010000268.1 Protein Homology CDS 5676 6167 . - 0 ID=cds-WP_006750445.1;Parent=gene-LDO50_RS19875;Dbxref=GenBank:WP_006750445.1;Name=WP_006750445.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004630835.1;locus_tag=LDO50_RS19875;product=acetolactate synthase small subunit;protein_id=WP_006750445.1;transl_table=11 NZ_CAJZAO010000268.1 RefSeq gene 6279 8042 . - . ID=gene-LDO50_RS19880;Name=LDO50_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19880;old_locus_tag=BVI1335_340007 NZ_CAJZAO010000268.1 Protein Homology CDS 6279 8042 . - 0 ID=cds-WP_014723366.1;Parent=gene-LDO50_RS19880;Dbxref=GenBank:WP_014723366.1;Name=WP_014723366.1;Ontology_term=GO:0009082,GO:0003984;gbkey=CDS;go_function=acetolactate synthase activity|0003984||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185769.1;locus_tag=LDO50_RS19880;product=acetolactate synthase 3 catalytic subunit;protein_id=WP_014723366.1;transl_table=11 NZ_CAJZAO010000268.1 RefSeq gene 8394 8957 . + . ID=gene-LDO50_RS19885;Name=LDO50_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19885;old_locus_tag=BVI1335_340008 NZ_CAJZAO010000268.1 Protein Homology CDS 8394 8957 . + 0 ID=cds-WP_011885548.1;Parent=gene-LDO50_RS19885;Dbxref=GenBank:WP_011885548.1;Name=WP_011885548.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011487480.1;locus_tag=LDO50_RS19885;product=RNA polymerase sigma factor;protein_id=WP_011885548.1;transl_table=11 NZ_CAJZAO010000268.1 RefSeq gene 8954 9379 . + . ID=gene-LDO50_RS19890;Name=LDO50_RS19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19890;old_locus_tag=BVI1335_340009 NZ_CAJZAO010000268.1 Protein Homology CDS 8954 9379 . + 0 ID=cds-WP_011885549.1;Parent=gene-LDO50_RS19890;Dbxref=GenBank:WP_011885549.1;Name=WP_011885549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896487.1;locus_tag=LDO50_RS19890;product=DUF3619 family protein;protein_id=WP_011885549.1;transl_table=11 NZ_CAJZAO010000268.1 RefSeq gene 9407 10153 . + . ID=gene-LDO50_RS19895;Name=LDO50_RS19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19895;old_locus_tag=BVI1335_340010 NZ_CAJZAO010000268.1 Protein Homology CDS 9407 10153 . + 0 ID=cds-WP_011885550.1;Parent=gene-LDO50_RS19895;Dbxref=GenBank:WP_011885550.1;Name=WP_011885550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011854043.1;locus_tag=LDO50_RS19895;product=DUF3106 domain-containing protein;protein_id=WP_011885550.1;transl_table=11 NZ_CAJZAO010000268.1 RefSeq gene 10232 10672 . + . ID=gene-LDO50_RS19900;Name=LDO50_RS19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19900;old_locus_tag=BVI1335_340011 NZ_CAJZAO010000268.1 Protein Homology CDS 10232 10672 . + 0 ID=cds-WP_230939067.1;Parent=gene-LDO50_RS19900;Dbxref=GenBank:WP_230939067.1;Name=WP_230939067.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763820.1;locus_tag=LDO50_RS19900;product=RDD family protein;protein_id=WP_230939067.1;transl_table=11 NZ_CAJZAO010000268.1 RefSeq gene 10967 11905 . + . ID=gene-LDO50_RS19905;Name=LDO50_RS19905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19905;old_locus_tag=BVI1335_340012 NZ_CAJZAO010000268.1 Protein Homology CDS 10967 11905 . + 0 ID=cds-WP_011885552.1;Parent=gene-LDO50_RS19905;Dbxref=GenBank:WP_011885552.1;Name=WP_011885552.1;Ontology_term=GO:0009245,GO:0008758,GO:0046872;gbkey=CDS;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,metal ion binding|0046872||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885552.1;locus_tag=LDO50_RS19905;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_011885552.1;transl_table=11 NZ_CAJZAO010000268.1 RefSeq gene 11935 12969 . + . ID=gene-LDO50_RS19910;Name=LDO50_RS19910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19910;old_locus_tag=BVI1335_340013 NZ_CAJZAO010000268.1 Protein Homology CDS 11935 12969 . + 0 ID=cds-WP_011885553.1;Parent=gene-LDO50_RS19910;Dbxref=GenBank:WP_011885553.1;Name=WP_011885553.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328913.1;locus_tag=LDO50_RS19910;product=glycosyltransferase family 4 protein;protein_id=WP_011885553.1;transl_table=11 NZ_CAJZAO010000268.1 RefSeq gene 12966 13502 . + . ID=gene-LDO50_RS19915;Name=LDO50_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19915;old_locus_tag=BVI1335_340014 NZ_CAJZAO010000268.1 Protein Homology CDS 12966 13502 . + 0 ID=cds-WP_011885554.1;Parent=gene-LDO50_RS19915;Dbxref=GenBank:WP_011885554.1;Name=WP_011885554.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411034.1;locus_tag=LDO50_RS19915;product=diacylglycerol kinase;protein_id=WP_011885554.1;transl_table=11 NZ_CAJZAO010000268.1 RefSeq gene 13693 14454 . + . ID=gene-LDO50_RS19920;Name=LDO50_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19920;old_locus_tag=BVI1335_340016 NZ_CAJZAO010000268.1 Protein Homology CDS 13693 14454 . + 0 ID=cds-WP_014723369.1;Parent=gene-LDO50_RS19920;Dbxref=GenBank:WP_014723369.1;Name=WP_014723369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212998.1;locus_tag=LDO50_RS19920;product=TetR/AcrR family transcriptional regulator;protein_id=WP_014723369.1;transl_table=11 NZ_CAJZAO010000268.1 RefSeq gene 14451 15032 . + . ID=gene-LDO50_RS19925;Name=LDO50_RS19925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19925;old_locus_tag=BVI1335_340015 NZ_CAJZAO010000268.1 Protein Homology CDS 14451 15032 . + 0 ID=cds-WP_034194062.1;Parent=gene-LDO50_RS19925;Dbxref=GenBank:WP_034194062.1;Name=WP_034194062.1;Ontology_term=GO:0009691,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885556.1;locus_tag=LDO50_RS19925;product=TIGR00730 family Rossman fold protein;protein_id=WP_034194062.1;transl_table=11 NZ_CAJZAO010000268.1 RefSeq gene 15090 15851 . + . ID=gene-LDO50_RS19930;Name=LDO50_RS19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19930;old_locus_tag=BVI1335_340017 NZ_CAJZAO010000268.1 Protein Homology CDS 15090 15851 . + 0 ID=cds-WP_034194084.1;Parent=gene-LDO50_RS19930;Dbxref=GenBank:WP_034194084.1;Name=WP_034194084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600657.1;locus_tag=LDO50_RS19930;product=SDR family oxidoreductase;protein_id=WP_034194084.1;transl_table=11 NZ_CAJZAO010000268.1 RefSeq gene 16079 18007 . + . ID=gene-LDO50_RS19935;Name=LDO50_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19935;old_locus_tag=BVI1335_340018 NZ_CAJZAO010000268.1 Protein Homology CDS 16079 18007 . + 0 ID=cds-WP_059474981.1;Parent=gene-LDO50_RS19935;Dbxref=GenBank:WP_059474981.1;Name=WP_059474981.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723372.1;locus_tag=LDO50_RS19935;product=ArnT family glycosyltransferase;protein_id=WP_059474981.1;transl_table=11 NZ_CAJZAO010000268.1 RefSeq gene 18075 18710 . - . ID=gene-LDO50_RS19940;Name=LDO50_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19940;old_locus_tag=BVI1335_340019 NZ_CAJZAO010000268.1 Protein Homology CDS 18075 18710 . - 0 ID=cds-WP_011885559.1;Parent=gene-LDO50_RS19940;Dbxref=GenBank:WP_011885559.1;Name=WP_011885559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885559.1;locus_tag=LDO50_RS19940;product=DUF924 family protein;protein_id=WP_011885559.1;transl_table=11 NZ_CAJZAO010000268.1 RefSeq gene 18707 19438 . - . ID=gene-LDO50_RS19945;Name=LDO50_RS19945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19945;old_locus_tag=BVI1335_340020 NZ_CAJZAO010000268.1 Protein Homology CDS 18707 19438 . - 0 ID=cds-WP_034194059.1;Parent=gene-LDO50_RS19945;Dbxref=GenBank:WP_034194059.1;Name=WP_034194059.1;Ontology_term=GO:0006419,GO:0002161,GO:0002196,GO:0003676,GO:0004813,GO:0005524,GO:0046872;gbkey=CDS;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA,Ser-tRNA(Ala) deacylase activity|0002196||IEA,nucleic acid binding|0003676||IEA,alanine-tRNA ligase activity|0004813||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398766.1;locus_tag=LDO50_RS19945;product=alanyl-tRNA editing protein;protein_id=WP_034194059.1;transl_table=11 NZ_CAJZAO010000268.1 RefSeq gene 19541 19951 . - . ID=gene-LDO50_RS19950;Name=LDO50_RS19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19950;old_locus_tag=BVI1335_340022 NZ_CAJZAO010000268.1 Protein Homology CDS 19541 19951 . - 0 ID=cds-WP_011885561.1;Parent=gene-LDO50_RS19950;Dbxref=GenBank:WP_011885561.1;Name=WP_011885561.1;Ontology_term=GO:0005344,GO:0019825,GO:0020037,GO:0046872;gbkey=CDS;go_function=oxygen carrier activity|0005344||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331548.1;locus_tag=LDO50_RS19950;product=group II truncated hemoglobin;protein_id=WP_011885561.1;transl_table=11 NZ_CAJZAO010000268.1 RefSeq gene 19994 20916 . - . ID=gene-LDO50_RS19955;Name=LDO50_RS19955;end_range=20916,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19955;old_locus_tag=BVI1335_340023;partial=true NZ_CAJZAO010000268.1 Protein Homology CDS 19994 20916 . - 2 ID=cds-WP_224020057.1;Parent=gene-LDO50_RS19955;Dbxref=GenBank:WP_224020057.1;Name=WP_224020057.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;end_range=20916,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492973.1;locus_tag=LDO50_RS19955;partial=true;product=ABC transporter permease;protein_id=WP_224020057.1;transl_table=11 ##sequence-region NZ_CAJZAO010000269.1 1 1121 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000269.1 RefSeq region 1 1121 . + . ID=NZ_CAJZAO010000269.1:1..1121;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_340 NZ_CAJZAO010000269.1 RefSeq gene 1 301 . - . ID=gene-LDO50_RS19960;Name=LDO50_RS19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19960;partial=true;start_range=.,1 NZ_CAJZAO010000269.1 Protein Homology CDS 1 301 . - 0 ID=cds-WP_224020058.1;Parent=gene-LDO50_RS19960;Dbxref=GenBank:WP_224020058.1;Name=WP_224020058.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491390.1;locus_tag=LDO50_RS19960;partial=true;product=cation transporter;protein_id=WP_224020058.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000269.1 RefSeq gene 616 1121 . + . ID=gene-LDO50_RS19965;Name=LDO50_RS19965;end_range=1121,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19965;partial=true NZ_CAJZAO010000269.1 Protein Homology CDS 616 1121 . + 0 ID=cds-WP_224020059.1;Parent=gene-LDO50_RS19965;Dbxref=GenBank:WP_224020059.1;Name=WP_224020059.1;end_range=1121,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538828.1;locus_tag=LDO50_RS19965;partial=true;product=DUF1254 domain-containing protein;protein_id=WP_224020059.1;transl_table=11 ##sequence-region NZ_CAJZAO010000270.1 1 2965 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000270.1 RefSeq region 1 2965 . + . ID=NZ_CAJZAO010000270.1:1..2965;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_341 NZ_CAJZAO010000270.1 RefSeq gene 1 1855 . - . ID=gene-LDO50_RS19970;Name=LDO50_RS19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19970;partial=true;start_range=.,1 NZ_CAJZAO010000270.1 Protein Homology CDS 1 1855 . - 0 ID=cds-WP_224020060.1;Parent=gene-LDO50_RS19970;Dbxref=GenBank:WP_224020060.1;Name=WP_224020060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725571.1;locus_tag=LDO50_RS19970;partial=true;product=GNVR domain-containing protein;protein_id=WP_224020060.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000270.1 RefSeq gene 1921 2832 . - . ID=gene-LDO50_RS19975;Name=LDO50_RS19975;end_range=2832,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS19975;old_locus_tag=BVI1335_3410002;partial=true NZ_CAJZAO010000270.1 Protein Homology CDS 1921 2832 . - 0 ID=cds-WP_443797835.1;Parent=gene-LDO50_RS19975;Dbxref=GenBank:WP_443797835.1;Name=WP_443797835.1;Ontology_term=GO:0015774,GO:0015159,GO:0016020;end_range=2832,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=polysaccharide transmembrane transporter activity|0015159||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879761.1;locus_tag=LDO50_RS19975;partial=true;product=polysaccharide biosynthesis/export family protein;protein_id=WP_443797835.1;transl_table=11 ##sequence-region NZ_CAJZAO010000271.1 1 630 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000271.1 RefSeq region 1 630 . + . ID=NZ_CAJZAO010000271.1:1..630;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_342 NZ_CAJZAO010000271.1 RefSeq pseudogene 1 218 . - . ID=gene-LDO50_RS19980;Name=LDO50_RS19980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS19980;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000271.1 GeneMarkS-2+ CDS 1 218 . - 0 ID=cds-LDO50_RS19980;Parent=gene-LDO50_RS19980;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS19980;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000271.1 RefSeq gene 437 630 . + . ID=gene-LDO50_RS31890;Name=LDO50_RS31890;end_range=630,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31890;partial=true;start_range=.,437 NZ_CAJZAO010000271.1 Protein Homology CDS 437 630 . + 1 ID=cds-WP_443797836.1;Parent=gene-LDO50_RS31890;Dbxref=GenBank:WP_443797836.1;Name=WP_443797836.1;end_range=630,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354955.1;locus_tag=LDO50_RS31890;partial=true;product=hypothetical protein;protein_id=WP_443797836.1;start_range=.,437;transl_table=11 ##sequence-region NZ_CAJZAO010000272.1 1 646 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000272.1 RefSeq region 1 646 . + . ID=NZ_CAJZAO010000272.1:1..646;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_343 NZ_CAJZAO010000272.1 RefSeq pseudogene 1 136 . - . ID=gene-LDO50_RS31895;Name=LDO50_RS31895;end_range=136,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31895;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000272.1 Protein Homology CDS 1 136 . - 0 ID=cds-LDO50_RS31895;Parent=gene-LDO50_RS31895;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=136,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192157.1;locus_tag=LDO50_RS31895;partial=true;product=hopanoid biosynthesis-associated protein HpnK;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000272.1 RefSeq pseudogene 180 646 . - . ID=gene-LDO50_RS19990;Name=LDO50_RS19990;end_range=646,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS19990;old_locus_tag=BVI1335_3430002;partial=true;pseudo=true NZ_CAJZAO010000272.1 Protein Homology CDS 180 646 . - 2 ID=cds-LDO50_RS19990;Parent=gene-LDO50_RS19990;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=646,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007181785.1;locus_tag=LDO50_RS19990;partial=true;product=hopanoid biosynthesis associated radical SAM protein HpnJ;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000273.1 1 2101 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000273.1 RefSeq region 1 2101 . + . ID=NZ_CAJZAO010000273.1:1..2101;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_344 NZ_CAJZAO010000273.1 RefSeq pseudogene 1 197 . + . ID=gene-LDO50_RS19995;Name=LDO50_RS19995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS19995;old_locus_tag=BVI1335_3440001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000273.1 Protein Homology CDS 1 197 . + 2 ID=cds-LDO50_RS19995;Parent=gene-LDO50_RS19995;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396592.1;locus_tag=LDO50_RS19995;partial=true;product=SctK family type III secretion system sorting platform protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000273.1 RefSeq gene 179 796 . + . ID=gene-LDO50_RS20000;Name=sctL;gbkey=Gene;gene=sctL;gene_biotype=protein_coding;locus_tag=LDO50_RS20000;old_locus_tag=BVI1335_3440002 NZ_CAJZAO010000273.1 Protein Homology CDS 179 796 . + 0 ID=cds-WP_034194308.1;Parent=gene-LDO50_RS20000;Dbxref=GenBank:WP_034194308.1;Name=WP_034194308.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctL;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725402.1;locus_tag=LDO50_RS20000;product=type III secretion system stator protein SctL;protein_id=WP_034194308.1;transl_table=11 NZ_CAJZAO010000273.1 RefSeq gene 793 2101 . + . ID=gene-LDO50_RS20005;Name=LDO50_RS20005;end_range=2101,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20005;partial=true NZ_CAJZAO010000273.1 Protein Homology CDS 793 2101 . + 0 ID=cds-WP_224020061.1;Parent=gene-LDO50_RS20005;Dbxref=GenBank:WP_224020061.1;Name=WP_224020061.1;Ontology_term=GO:0005524,GO:0016887;end_range=2101,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216602.1;locus_tag=LDO50_RS20005;partial=true;product=FliI/YscN family ATPase;protein_id=WP_224020061.1;transl_table=11 ##sequence-region NZ_CAJZAO010000274.1 1 1645 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000274.1 RefSeq region 1 1645 . + . ID=NZ_CAJZAO010000274.1:1..1645;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_345 NZ_CAJZAO010000274.1 RefSeq gene 177 636 . - . ID=gene-LDO50_RS20010;Name=LDO50_RS20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20010;old_locus_tag=BVI1335_3450002;partial=true;start_range=.,177 NZ_CAJZAO010000274.1 Protein Homology CDS 177 636 . - 0 ID=cds-WP_372586112.1;Parent=gene-LDO50_RS20010;Dbxref=GenBank:WP_372586112.1;Name=WP_372586112.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882328.1;locus_tag=LDO50_RS20010;partial=true;product=YkgJ family cysteine cluster protein;protein_id=WP_372586112.1;start_range=.,177;transl_table=11 NZ_CAJZAO010000274.1 RefSeq gene 698 1303 . - . ID=gene-LDO50_RS20015;Name=LDO50_RS20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20015;old_locus_tag=BVI1335_3450003 NZ_CAJZAO010000274.1 Protein Homology CDS 698 1303 . - 0 ID=cds-WP_224020062.1;Parent=gene-LDO50_RS20015;Dbxref=GenBank:WP_224020062.1;Name=WP_224020062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882327.1;locus_tag=LDO50_RS20015;product=uracil-DNA glycosylase family protein;protein_id=WP_224020062.1;transl_table=11 NZ_CAJZAO010000274.1 RefSeq pseudogene 1496 1645 . - . ID=gene-LDO50_RS31900;Name=LDO50_RS31900;end_range=1645,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31900;old_locus_tag=BVI1335_3450004;partial=true;pseudo=true;start_range=.,1496 NZ_CAJZAO010000274.1 Protein Homology CDS 1496 1645 . - 1 ID=cds-LDO50_RS31900;Parent=gene-LDO50_RS31900;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1645,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216929.1;locus_tag=LDO50_RS31900;partial=true;product=nitrate ABC transporter substrate-binding protein;pseudo=true;start_range=.,1496;transl_table=11 ##sequence-region NZ_CAJZAO010000275.1 1 2713 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000275.1 RefSeq region 1 2713 . + . ID=NZ_CAJZAO010000275.1:1..2713;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_346 NZ_CAJZAO010000275.1 RefSeq gene 1 532 . + . ID=gene-LDO50_RS20025;Name=LDO50_RS20025;end_range=532,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20025;old_locus_tag=BVI1335_3460001;partial=true;start_range=.,1 NZ_CAJZAO010000275.1 Protein Homology CDS 1 532 . + 1 ID=cds-WP_443797837.1;Parent=gene-LDO50_RS20025;Dbxref=GenBank:WP_443797837.1;Name=WP_443797837.1;Ontology_term=GO:0009236,GO:0008939;end_range=532,.;gbkey=CDS;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885726.1;locus_tag=LDO50_RS20025;partial=true;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_443797837.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000275.1 RefSeq gene 543 643 . + . ID=gene-LDO50_RS31905;Name=LDO50_RS31905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31905;partial=true;start_range=.,543 NZ_CAJZAO010000275.1 Protein Homology CDS 543 643 . + 2 ID=cds-WP_443797838.1;Parent=gene-LDO50_RS31905;Dbxref=GenBank:WP_443797838.1;Name=WP_443797838.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694361.1;locus_tag=LDO50_RS31905;partial=true;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_443797838.1;start_range=.,543;transl_table=11 NZ_CAJZAO010000275.1 RefSeq gene 657 1409 . + . ID=gene-LDO50_RS20030;Name=LDO50_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20030;old_locus_tag=BVI1335_3460002 NZ_CAJZAO010000275.1 Protein Homology CDS 657 1409 . + 0 ID=cds-WP_224020063.1;Parent=gene-LDO50_RS20030;Dbxref=GenBank:WP_224020063.1;Name=WP_224020063.1;Ontology_term=GO:0051073;gbkey=CDS;go_function=adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484444.1;locus_tag=LDO50_RS20030;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_224020063.1;transl_table=11 NZ_CAJZAO010000275.1 RefSeq gene 1394 1978 . + . ID=gene-LDO50_RS20035;Name=cobC;gbkey=Gene;gene=cobC;gene_biotype=protein_coding;locus_tag=LDO50_RS20035;old_locus_tag=BVI1335_3460003 NZ_CAJZAO010000275.1 Protein Homology CDS 1394 1978 . + 0 ID=cds-WP_046425687.1;Parent=gene-LDO50_RS20035;Dbxref=GenBank:WP_046425687.1;Name=WP_046425687.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;gene=cobC;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484442.1;locus_tag=LDO50_RS20035;product=alpha-ribazole phosphatase;protein_id=WP_046425687.1;transl_table=11 NZ_CAJZAO010000275.1 RefSeq gene 2024 2713 . - . ID=gene-LDO50_RS20040;Name=LDO50_RS20040;end_range=2713,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20040;old_locus_tag=BVI1335_3460004;partial=true NZ_CAJZAO010000275.1 Protein Homology CDS 2024 2713 . - 0 ID=cds-WP_224020064.1;Parent=gene-LDO50_RS20040;Dbxref=GenBank:WP_224020064.1;Name=WP_224020064.1;end_range=2713,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885723.1;locus_tag=LDO50_RS20040;partial=true;product=helical backbone metal receptor;protein_id=WP_224020064.1;transl_table=11 ##sequence-region NZ_CAJZAO010000276.1 1 1148 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000276.1 RefSeq region 1 1148 . + . ID=NZ_CAJZAO010000276.1:1..1148;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_347 NZ_CAJZAO010000276.1 RefSeq gene 1 999 . + . ID=gene-LDO50_RS20045;Name=LDO50_RS20045;end_range=999,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20045;old_locus_tag=BVI1335_3470001;partial=true;start_range=.,1 NZ_CAJZAO010000276.1 Protein Homology CDS 1 999 . + 0 ID=cds-WP_253074466.1;Parent=gene-LDO50_RS20045;Dbxref=GenBank:WP_253074466.1;Name=WP_253074466.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;end_range=999,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880330.1;locus_tag=LDO50_RS20045;partial=true;product=FUSC family protein;protein_id=WP_253074466.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAO010000277.1 1 641 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000277.1 RefSeq region 1 641 . + . ID=NZ_CAJZAO010000277.1:1..641;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_348 NZ_CAJZAO010000277.1 RefSeq pseudogene 1 353 . + . ID=gene-LDO50_RS31910;Name=LDO50_RS31910;end_range=353,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31910;old_locus_tag=BVI1335_3480001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000277.1 Protein Homology CDS 1 353 . + 2 ID=cds-LDO50_RS31910;Parent=gene-LDO50_RS31910;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=353,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495601.1;locus_tag=LDO50_RS31910;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000277.1 RefSeq pseudogene 364 641 . + . ID=gene-LDO50_RS31915;Name=LDO50_RS31915;end_range=641,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31915;partial=true;pseudo=true;start_range=.,364 NZ_CAJZAO010000277.1 Protein Homology CDS 364 641 . + 1 ID=cds-LDO50_RS31915;Parent=gene-LDO50_RS31915;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=641,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495601.1;locus_tag=LDO50_RS31915;partial=true;product=hypothetical protein;pseudo=true;start_range=.,364;transl_table=11 ##sequence-region NZ_CAJZAO010000278.1 1 4110 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000278.1 RefSeq region 1 4110 . + . ID=NZ_CAJZAO010000278.1:1..4110;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_349 NZ_CAJZAO010000278.1 RefSeq gene 1 289 . + . ID=gene-LDO50_RS20055;Name=LDO50_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20055;old_locus_tag=BVI1335_3490001;partial=true;start_range=.,1 NZ_CAJZAO010000278.1 Protein Homology CDS 1 289 . + 1 ID=cds-WP_443797839.1;Parent=gene-LDO50_RS20055;Dbxref=GenBank:WP_443797839.1;Name=WP_443797839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880089.1;locus_tag=LDO50_RS20055;partial=true;product=ApeI family dehydratase;protein_id=WP_443797839.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000278.1 RefSeq gene 286 2007 . + . ID=gene-LDO50_RS20060;Name=LDO50_RS20060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20060;old_locus_tag=BVI1335_3490002 NZ_CAJZAO010000278.1 Protein Homology CDS 286 2007 . + 0 ID=cds-WP_224020065.1;Parent=gene-LDO50_RS20060;Dbxref=GenBank:WP_224020065.1;Name=WP_224020065.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415769.1;locus_tag=LDO50_RS20060;product=glycosyltransferase family 2 protein;protein_id=WP_224020065.1;transl_table=11 NZ_CAJZAO010000278.1 RefSeq gene 1994 3604 . + . ID=gene-LDO50_RS20065;Name=LDO50_RS20065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20065;old_locus_tag=BVI1335_3490003 NZ_CAJZAO010000278.1 Protein Homology CDS 1994 3604 . + 0 ID=cds-WP_212187167.1;Parent=gene-LDO50_RS20065;Dbxref=GenBank:WP_212187167.1;Name=WP_212187167.1;Ontology_term=GO:0170035,GO:0016841;gbkey=CDS;go_function=ammonia-lyase activity|0016841||IEA;go_process=L-amino acid catabolic process|0170035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880091.1;locus_tag=LDO50_RS20065;product=HAL/PAL/TAL family ammonia-lyase;protein_id=WP_212187167.1;transl_table=11 NZ_CAJZAO010000278.1 RefSeq gene 3601 4029 . + . ID=gene-LDO50_RS20070;Name=LDO50_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20070;old_locus_tag=BVI1335_3490005 NZ_CAJZAO010000278.1 Protein Homology CDS 3601 4029 . + 0 ID=cds-WP_046424864.1;Parent=gene-LDO50_RS20070;Dbxref=GenBank:WP_046424864.1;Name=WP_046424864.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880092.1;locus_tag=LDO50_RS20070;product=acyl-CoA thioesterase;protein_id=WP_046424864.1;transl_table=11 ##sequence-region NZ_CAJZAO010000279.1 1 54363 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000279.1 RefSeq region 1 54363 . + . ID=NZ_CAJZAO010000279.1:1..54363;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_35 NZ_CAJZAO010000279.1 RefSeq gene 1 423 . - . ID=gene-LDO50_RS20075;Name=LDO50_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20075;partial=true;start_range=.,1 NZ_CAJZAO010000279.1 Protein Homology CDS 1 423 . - 0 ID=cds-WP_224020066.1;Parent=gene-LDO50_RS20075;Dbxref=GenBank:WP_224020066.1;Name=WP_224020066.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527209.1;locus_tag=LDO50_RS20075;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_224020066.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 782 4846 . + . ID=gene-LDO50_RS20080;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=LDO50_RS20080;old_locus_tag=BVI1335_350002 NZ_CAJZAO010000279.1 Protein Homology CDS 782 4846 . + 0 ID=cds-WP_059474453.1;Parent=gene-LDO50_RS20080;Dbxref=GenBank:WP_059474453.1;Name=WP_059474453.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213195.1;locus_tag=LDO50_RS20080;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_059474453.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 4846 5385 . + . ID=gene-LDO50_RS20085;Name=LDO50_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20085;old_locus_tag=BVI1335_350003 NZ_CAJZAO010000279.1 Protein Homology CDS 4846 5385 . + 0 ID=cds-WP_059461304.1;Parent=gene-LDO50_RS20085;Dbxref=GenBank:WP_059461304.1;Name=WP_059461304.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723162.1;locus_tag=LDO50_RS20085;product=GNAT family N-acetyltransferase;protein_id=WP_059461304.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 5528 6310 . - . ID=gene-LDO50_RS20090;Name=LDO50_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20090;old_locus_tag=BVI1335_350004 NZ_CAJZAO010000279.1 Protein Homology CDS 5528 6310 . - 0 ID=cds-WP_011885066.1;Parent=gene-LDO50_RS20090;Dbxref=GenBank:WP_011885066.1;Name=WP_011885066.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601097.1;locus_tag=LDO50_RS20090;product=peptidylprolyl isomerase;protein_id=WP_011885066.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 6329 6637 . - . ID=gene-LDO50_RS20095;Name=LDO50_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20095;old_locus_tag=BVI1335_350005 NZ_CAJZAO010000279.1 Protein Homology CDS 6329 6637 . - 0 ID=cds-WP_011885065.1;Parent=gene-LDO50_RS20095;Dbxref=GenBank:WP_011885065.1;Name=WP_011885065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657151.1;locus_tag=LDO50_RS20095;product=BolA family protein;protein_id=WP_011885065.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 6639 7169 . - . ID=gene-LDO50_RS20100;Name=LDO50_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20100;old_locus_tag=BVI1335_350006 NZ_CAJZAO010000279.1 Protein Homology CDS 6639 7169 . - 0 ID=cds-WP_014723160.1;Parent=gene-LDO50_RS20100;Dbxref=GenBank:WP_014723160.1;Name=WP_014723160.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904993.1;locus_tag=LDO50_RS20100;product=septation protein A;protein_id=WP_014723160.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 7294 7725 . - . ID=gene-LDO50_RS20105;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=LDO50_RS20105;old_locus_tag=BVI1335_350008 NZ_CAJZAO010000279.1 Protein Homology CDS 7294 7725 . - 0 ID=cds-WP_011885063.1;Parent=gene-LDO50_RS20105;Dbxref=GenBank:WP_011885063.1;Name=WP_011885063.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761174.1;locus_tag=LDO50_RS20105;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_011885063.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 7764 9332 . - . ID=gene-LDO50_RS20110;Name=LDO50_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20110;old_locus_tag=BVI1335_350009 NZ_CAJZAO010000279.1 Protein Homology CDS 7764 9332 . - 0 ID=cds-WP_046426917.1;Parent=gene-LDO50_RS20110;Dbxref=GenBank:WP_046426917.1;Name=WP_046426917.1;Ontology_term=GO:0000287,GO:0005524,GO:0070733;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657149.1;locus_tag=LDO50_RS20110;product=protein adenylyltransferase SelO;protein_id=WP_046426917.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 9508 11151 . + . ID=gene-LDO50_RS20115;Name=LDO50_RS20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20115;old_locus_tag=BVI1335_350010 NZ_CAJZAO010000279.1 Protein Homology CDS 9508 11151 . + 0 ID=cds-WP_014723157.1;Parent=gene-LDO50_RS20115;Dbxref=GenBank:WP_014723157.1;Name=WP_014723157.1;Ontology_term=GO:0016874;gbkey=CDS;go_function=ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723157.1;locus_tag=LDO50_RS20115;product=3-(methylthio)propionyl-CoA ligase;protein_id=WP_014723157.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 11338 13422 . + . ID=gene-LDO50_RS20120;Name=LDO50_RS20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20120;old_locus_tag=BVI1335_350011 NZ_CAJZAO010000279.1 Protein Homology CDS 11338 13422 . + 0 ID=cds-WP_059696403.1;Parent=gene-LDO50_RS20120;Dbxref=GenBank:WP_059696403.1;Name=WP_059696403.1;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483901.1;locus_tag=LDO50_RS20120;product=3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein;protein_id=WP_059696403.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 13468 14100 . + . ID=gene-LDO50_RS20125;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=LDO50_RS20125;old_locus_tag=BVI1335_350012 NZ_CAJZAO010000279.1 Protein Homology CDS 13468 14100 . + 0 ID=cds-WP_059459770.1;Parent=gene-LDO50_RS20125;Dbxref=GenBank:WP_059459770.1;Name=WP_059459770.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328688.1;locus_tag=LDO50_RS20125;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_059459770.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 14144 15322 . + . ID=gene-LDO50_RS20130;Name=LDO50_RS20130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20130;old_locus_tag=BVI1335_350013 NZ_CAJZAO010000279.1 Protein Homology CDS 14144 15322 . + 0 ID=cds-WP_059461301.1;Parent=gene-LDO50_RS20130;Dbxref=GenBank:WP_059461301.1;Name=WP_059461301.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890652.1;locus_tag=LDO50_RS20130;product=acetyl-CoA C-acyltransferase;protein_id=WP_059461301.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 15635 17035 . + . ID=gene-LDO50_RS20135;Name=LDO50_RS20135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20135;old_locus_tag=BVI1335_350014 NZ_CAJZAO010000279.1 Protein Homology CDS 15635 17035 . + 0 ID=cds-WP_011885057.1;Parent=gene-LDO50_RS20135;Dbxref=GenBank:WP_011885057.1;Name=WP_011885057.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364061.1;locus_tag=LDO50_RS20135;product=sensor domain-containing diguanylate cyclase;protein_id=WP_011885057.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 17117 19246 . - . ID=gene-LDO50_RS20140;Name=LDO50_RS20140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20140;old_locus_tag=BVI1335_350015 NZ_CAJZAO010000279.1 Protein Homology CDS 17117 19246 . - 0 ID=cds-WP_176043939.1;Parent=gene-LDO50_RS20140;Dbxref=GenBank:WP_176043939.1;Name=WP_176043939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760027.1;locus_tag=LDO50_RS20140;product=hypothetical protein;protein_id=WP_176043939.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 20007 22190 . - . ID=gene-LDO50_RS20145;Name=LDO50_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20145;old_locus_tag=BVI1335_350017 NZ_CAJZAO010000279.1 Protein Homology CDS 20007 22190 . - 0 ID=cds-WP_443797840.1;Parent=gene-LDO50_RS20145;Dbxref=GenBank:WP_443797840.1;Name=WP_443797840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885055.1;locus_tag=LDO50_RS20145;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_443797840.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 22151 23890 . + . ID=gene-LDO50_RS20150;Name=LDO50_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20150;old_locus_tag=BVI1335_350018 NZ_CAJZAO010000279.1 GeneMarkS-2+ CDS 22151 23890 . + 0 ID=cds-WP_230946864.1;Parent=gene-LDO50_RS20150;Dbxref=GenBank:WP_230946864.1;Name=WP_230946864.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS20150;product=alpha/beta hydrolase family protein;protein_id=WP_230946864.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 24087 24632 . - . ID=gene-LDO50_RS20155;Name=LDO50_RS20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20155;old_locus_tag=BVI1335_350019 NZ_CAJZAO010000279.1 Protein Homology CDS 24087 24632 . - 0 ID=cds-WP_045579016.1;Parent=gene-LDO50_RS20155;Dbxref=GenBank:WP_045579016.1;Name=WP_045579016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885053.1;locus_tag=LDO50_RS20155;product=hypothetical protein;protein_id=WP_045579016.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 24827 26065 . - . ID=gene-LDO50_RS20160;Name=LDO50_RS20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20160;old_locus_tag=BVI1335_350020 NZ_CAJZAO010000279.1 Protein Homology CDS 24827 26065 . - 0 ID=cds-WP_045579017.1;Parent=gene-LDO50_RS20160;Dbxref=GenBank:WP_045579017.1;Name=WP_045579017.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723147.1;locus_tag=LDO50_RS20160;product=MFS transporter;protein_id=WP_045579017.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 26062 26427 . - . ID=gene-LDO50_RS20165;Name=LDO50_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20165;old_locus_tag=BVI1335_350021 NZ_CAJZAO010000279.1 Protein Homology CDS 26062 26427 . - 0 ID=cds-WP_045579018.1;Parent=gene-LDO50_RS20165;Dbxref=GenBank:WP_045579018.1;Name=WP_045579018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017453393.1;locus_tag=LDO50_RS20165;product=RidA family protein;protein_id=WP_045579018.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 26542 27381 . + . ID=gene-LDO50_RS20170;Name=LDO50_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20170;old_locus_tag=BVI1335_350022 NZ_CAJZAO010000279.1 Protein Homology CDS 26542 27381 . + 0 ID=cds-WP_224020067.1;Parent=gene-LDO50_RS20170;Dbxref=GenBank:WP_224020067.1;Name=WP_224020067.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885050.1;locus_tag=LDO50_RS20170;product=TrmB family transcriptional regulator;protein_id=WP_224020067.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 27602 28174 . - . ID=gene-LDO50_RS20180;Name=LDO50_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20180;old_locus_tag=BVI1335_350024 NZ_CAJZAO010000279.1 Protein Homology CDS 27602 28174 . - 0 ID=cds-WP_212172132.1;Parent=gene-LDO50_RS20180;Dbxref=GenBank:WP_212172132.1;Name=WP_212172132.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885049.1;locus_tag=LDO50_RS20180;product=GNAT family N-acetyltransferase;protein_id=WP_212172132.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 28932 29204 . + . ID=gene-LDO50_RS20185;Name=LDO50_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20185 NZ_CAJZAO010000279.1 GeneMarkS-2+ CDS 28932 29204 . + 0 ID=cds-WP_069238688.1;Parent=gene-LDO50_RS20185;Dbxref=GenBank:WP_069238688.1;Name=WP_069238688.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS20185;product=hypothetical protein;protein_id=WP_069238688.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 29222 29548 . - . ID=gene-LDO50_RS20190;Name=LDO50_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20190;old_locus_tag=BVI1335_350026 NZ_CAJZAO010000279.1 GeneMarkS-2+ CDS 29222 29548 . - 0 ID=cds-WP_060043247.1;Parent=gene-LDO50_RS20190;Dbxref=GenBank:WP_060043247.1;Name=WP_060043247.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS20190;product=hypothetical protein;protein_id=WP_060043247.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 29655 29810 . - . ID=gene-LDO50_RS20195;Name=LDO50_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20195;old_locus_tag=BVI1335_350027 NZ_CAJZAO010000279.1 GeneMarkS-2+ CDS 29655 29810 . - 0 ID=cds-WP_155121845.1;Parent=gene-LDO50_RS20195;Dbxref=GenBank:WP_155121845.1;Name=WP_155121845.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS20195;product=hypothetical protein;protein_id=WP_155121845.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 30025 32250 . - . ID=gene-LDO50_RS20200;Name=LDO50_RS20200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20200;old_locus_tag=BVI1335_350028 NZ_CAJZAO010000279.1 Protein Homology CDS 30025 32250 . - 0 ID=cds-WP_080484207.1;Parent=gene-LDO50_RS20200;Dbxref=GenBank:WP_080484207.1;Name=WP_080484207.1;Ontology_term=GO:0006260,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:TIGR01613.1;locus_tag=LDO50_RS20200;product=phage/plasmid primase%2C P4 family;protein_id=WP_080484207.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 32464 32733 . - . ID=gene-LDO50_RS20205;Name=LDO50_RS20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20205;old_locus_tag=BVI1335_350029 NZ_CAJZAO010000279.1 Protein Homology CDS 32464 32733 . - 0 ID=cds-WP_069238691.1;Parent=gene-LDO50_RS20205;Dbxref=GenBank:WP_069238691.1;Name=WP_069238691.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF017717.6;locus_tag=LDO50_RS20205;product=helix-turn-helix transcriptional regulator;protein_id=WP_069238691.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 32894 33592 . - . ID=gene-LDO50_RS20210;Name=LDO50_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20210 NZ_CAJZAO010000279.1 Protein Homology CDS 32894 33592 . - 0 ID=cds-WP_155632400.1;Parent=gene-LDO50_RS20210;Dbxref=GenBank:WP_155632400.1;Name=WP_155632400.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040446.5;locus_tag=LDO50_RS20210;product=transcriptional regulator domain-containing protein;protein_id=WP_155632400.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 34297 34965 . + . ID=gene-LDO50_RS20215;Name=LDO50_RS20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20215;old_locus_tag=BVI1335_350032 NZ_CAJZAO010000279.1 GeneMarkS-2+ CDS 34297 34965 . + 0 ID=cds-WP_224020068.1;Parent=gene-LDO50_RS20215;Dbxref=GenBank:WP_224020068.1;Name=WP_224020068.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS20215;product=hypothetical protein;protein_id=WP_224020068.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 34968 36050 . + . ID=gene-LDO50_RS20220;Name=LDO50_RS20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20220 NZ_CAJZAO010000279.1 Protein Homology CDS 34968 36050 . + 0 ID=cds-WP_069238692.1;Parent=gene-LDO50_RS20220;Dbxref=GenBank:WP_069238692.1;Name=WP_069238692.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683021.1;locus_tag=LDO50_RS20220;product=helix-turn-helix domain-containing protein;protein_id=WP_069238692.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 36161 36799 . - . ID=gene-LDO50_RS20225;Name=LDO50_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20225;old_locus_tag=BVI1335_350034 NZ_CAJZAO010000279.1 Protein Homology CDS 36161 36799 . - 0 ID=cds-WP_224020069.1;Parent=gene-LDO50_RS20225;Dbxref=GenBank:WP_224020069.1;Name=WP_224020069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020425226.1;locus_tag=LDO50_RS20225;product=hypothetical protein;protein_id=WP_224020069.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 37188 37808 . - . ID=gene-LDO50_RS20230;Name=LDO50_RS20230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20230;old_locus_tag=BVI1335_350036 NZ_CAJZAO010000279.1 GeneMarkS-2+ CDS 37188 37808 . - 0 ID=cds-WP_155121848.1;Parent=gene-LDO50_RS20230;Dbxref=GenBank:WP_155121848.1;Name=WP_155121848.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS20230;product=hypothetical protein;protein_id=WP_155121848.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 37947 38546 . - . ID=gene-LDO50_RS20235;Name=LDO50_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20235;old_locus_tag=BVI1335_350037 NZ_CAJZAO010000279.1 Protein Homology CDS 37947 38546 . - 0 ID=cds-WP_060042725.1;Parent=gene-LDO50_RS20235;Dbxref=GenBank:WP_060042725.1;Name=WP_060042725.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011488173.1;locus_tag=LDO50_RS20235;product=recombinase family protein;protein_id=WP_060042725.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 39072 42884 . + . ID=gene-LDO50_RS20240;Name=LDO50_RS20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20240;old_locus_tag=BVI1335_350039 NZ_CAJZAO010000279.1 GeneMarkS-2+ CDS 39072 42884 . + 0 ID=cds-WP_080484209.1;Parent=gene-LDO50_RS20240;Dbxref=GenBank:WP_080484209.1;Name=WP_080484209.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS20240;product=hypothetical protein;protein_id=WP_080484209.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 43474 45993 . + . ID=gene-LDO50_RS20245;Name=LDO50_RS20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20245;old_locus_tag=BVI1335_350040 NZ_CAJZAO010000279.1 Protein Homology CDS 43474 45993 . + 0 ID=cds-WP_081064934.1;Parent=gene-LDO50_RS20245;Dbxref=GenBank:WP_081064934.1;Name=WP_081064934.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013587859.1;locus_tag=LDO50_RS20245;product=type VI secretion system Vgr family protein;protein_id=WP_081064934.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 46014 48176 . + . ID=gene-LDO50_RS20250;Name=LDO50_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20250;old_locus_tag=BVI1335_350041 NZ_CAJZAO010000279.1 GeneMarkS-2+ CDS 46014 48176 . + 0 ID=cds-WP_155121849.1;Parent=gene-LDO50_RS20250;Dbxref=GenBank:WP_155121849.1;Name=WP_155121849.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS20250;product=M23 family metallopeptidase;protein_id=WP_155121849.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 48173 48841 . + . ID=gene-LDO50_RS20255;Name=LDO50_RS20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20255;old_locus_tag=BVI1335_350042 NZ_CAJZAO010000279.1 GeneMarkS-2+ CDS 48173 48841 . + 0 ID=cds-WP_155121850.1;Parent=gene-LDO50_RS20255;Dbxref=GenBank:WP_155121850.1;Name=WP_155121850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS20255;product=hypothetical protein;protein_id=WP_155121850.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 48920 49171 . + . ID=gene-LDO50_RS20260;Name=LDO50_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20260;old_locus_tag=BVI1335_350043 NZ_CAJZAO010000279.1 Protein Homology CDS 48920 49171 . + 0 ID=cds-WP_060042731.1;Parent=gene-LDO50_RS20260;Dbxref=GenBank:WP_060042731.1;Name=WP_060042731.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691782.1;locus_tag=LDO50_RS20260;product=PAAR domain-containing protein;protein_id=WP_060042731.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 51032 51325 . + . ID=gene-LDO50_RS20265;Name=LDO50_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20265 NZ_CAJZAO010000279.1 Protein Homology CDS 51032 51325 . + 0 ID=cds-WP_060042733.1;Parent=gene-LDO50_RS20265;Dbxref=GenBank:WP_060042733.1;Name=WP_060042733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009969735.1;locus_tag=LDO50_RS20265;product=hypothetical protein;protein_id=WP_060042733.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 51342 52004 . + . ID=gene-LDO50_RS20270;Name=LDO50_RS20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20270;old_locus_tag=BVI1335_350048 NZ_CAJZAO010000279.1 Protein Homology CDS 51342 52004 . + 0 ID=cds-WP_224020070.1;Parent=gene-LDO50_RS20270;Dbxref=GenBank:WP_224020070.1;Name=WP_224020070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012761673.1;locus_tag=LDO50_RS20270;product=hypothetical protein;protein_id=WP_224020070.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 52009 52329 . - . ID=gene-LDO50_RS20275;Name=LDO50_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20275;old_locus_tag=BVI1335_350049 NZ_CAJZAO010000279.1 Protein Homology CDS 52009 52329 . - 0 ID=cds-WP_060042735.1;Parent=gene-LDO50_RS20275;Dbxref=GenBank:WP_060042735.1;Name=WP_060042735.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700228.1;locus_tag=LDO50_RS20275;product=helix-turn-helix domain-containing protein;protein_id=WP_060042735.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 52514 53356 . + . ID=gene-LDO50_RS20280;Name=LDO50_RS20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20280;old_locus_tag=BVI1335_350051 NZ_CAJZAO010000279.1 Protein Homology CDS 52514 53356 . + 0 ID=cds-WP_060042737.1;Parent=gene-LDO50_RS20280;Dbxref=GenBank:WP_060042737.1;Name=WP_060042737.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023746.6;locus_tag=LDO50_RS20280;product=hypothetical protein;protein_id=WP_060042737.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 53379 53702 . - . ID=gene-LDO50_RS20285;Name=LDO50_RS20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20285;old_locus_tag=BVI1335_350053 NZ_CAJZAO010000279.1 Protein Homology CDS 53379 53702 . - 0 ID=cds-WP_060042739.1;Parent=gene-LDO50_RS20285;Dbxref=GenBank:WP_060042739.1;Name=WP_060042739.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004555357.1;locus_tag=LDO50_RS20285;product=helix-turn-helix transcriptional regulator;protein_id=WP_060042739.1;transl_table=11 NZ_CAJZAO010000279.1 RefSeq gene 53810 54286 . + . ID=gene-LDO50_RS20290;Name=LDO50_RS20290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20290;old_locus_tag=BVI1335_350054 NZ_CAJZAO010000279.1 GeneMarkS-2+ CDS 53810 54286 . + 0 ID=cds-WP_155121852.1;Parent=gene-LDO50_RS20290;Dbxref=GenBank:WP_155121852.1;Name=WP_155121852.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS20290;product=hypothetical protein;protein_id=WP_155121852.1;transl_table=11 ##sequence-region NZ_CAJZAO010000280.1 1 1576 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000280.1 RefSeq region 1 1576 . + . ID=NZ_CAJZAO010000280.1:1..1576;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_350 NZ_CAJZAO010000280.1 RefSeq pseudogene 1 199 . - . ID=gene-LDO50_RS20295;Name=LDO50_RS20295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS20295;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000280.1 Protein Homology CDS 1 199 . - 0 ID=cds-LDO50_RS20295;Parent=gene-LDO50_RS20295;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880459.1;locus_tag=LDO50_RS20295;partial=true;product=RND transporter;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000280.1 RefSeq gene 415 1576 . - . ID=gene-LDO50_RS20300;Name=LDO50_RS20300;end_range=1576,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20300;old_locus_tag=BVI1335_3500002;partial=true NZ_CAJZAO010000280.1 Protein Homology CDS 415 1576 . - 1 ID=cds-WP_224020071.1;Parent=gene-LDO50_RS20300;Dbxref=GenBank:WP_224020071.1;Name=WP_224020071.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;end_range=1576,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372109.1;locus_tag=LDO50_RS20300;partial=true;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_224020071.1;transl_table=11 ##sequence-region NZ_CAJZAO010000281.1 1 1820 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000281.1 RefSeq region 1 1820 . + . ID=NZ_CAJZAO010000281.1:1..1820;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_351 NZ_CAJZAO010000281.1 RefSeq gene 1 531 . + . ID=gene-LDO50_RS20305;Name=LDO50_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20305;old_locus_tag=BVI1335_3510001;partial=true;start_range=.,1 NZ_CAJZAO010000281.1 Protein Homology CDS 1 531 . + 0 ID=cds-WP_224020072.1;Parent=gene-LDO50_RS20305;Dbxref=GenBank:WP_224020072.1;Name=WP_224020072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884840.1;locus_tag=LDO50_RS20305;partial=true;product=precorrin-3B C(17)-methyltransferase;protein_id=WP_224020072.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000281.1 RefSeq gene 595 1167 . - . ID=gene-LDO50_RS20310;Name=LDO50_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20310;old_locus_tag=BVI1335_3510002 NZ_CAJZAO010000281.1 Protein Homology CDS 595 1167 . - 0 ID=cds-WP_046427046.1;Parent=gene-LDO50_RS20310;Dbxref=GenBank:WP_046427046.1;Name=WP_046427046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756007.1;locus_tag=LDO50_RS20310;product=DUF1993 domain-containing protein;protein_id=WP_046427046.1;transl_table=11 NZ_CAJZAO010000281.1 RefSeq gene 1258 1710 . - . ID=gene-LDO50_RS20315;Name=LDO50_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20315;old_locus_tag=BVI1335_3510003 NZ_CAJZAO010000281.1 Protein Homology CDS 1258 1710 . - 0 ID=cds-WP_011884836.1;Parent=gene-LDO50_RS20315;Dbxref=GenBank:WP_011884836.1;Name=WP_011884836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897046.1;locus_tag=LDO50_RS20315;product=YaiI/YqxD family protein;protein_id=WP_011884836.1;transl_table=11 ##sequence-region NZ_CAJZAO010000282.1 1 889 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000282.1 RefSeq region 1 889 . + . ID=NZ_CAJZAO010000282.1:1..889;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_352 NZ_CAJZAO010000282.1 RefSeq gene 1 323 . - . ID=gene-LDO50_RS20320;Name=LDO50_RS20320;end_range=323,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20320;partial=true;start_range=.,1 NZ_CAJZAO010000282.1 Protein Homology CDS 1 323 . - 1 ID=cds-WP_372586113.1;Parent=gene-LDO50_RS20320;Dbxref=GenBank:WP_372586113.1;Name=WP_372586113.1;end_range=323,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724819.1;locus_tag=LDO50_RS20320;partial=true;product=extracellular solute-binding protein;protein_id=WP_372586113.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000282.1 RefSeq gene 687 889 . + . ID=gene-LDO50_RS20325;Name=LDO50_RS20325;end_range=889,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20325;partial=true;start_range=.,687 NZ_CAJZAO010000282.1 Protein Homology CDS 687 889 . + 1 ID=cds-WP_224020073.1;Parent=gene-LDO50_RS20325;Dbxref=GenBank:WP_224020073.1;Name=WP_224020073.1;Ontology_term=GO:0006355,GO:0003700;end_range=889,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899135.1;locus_tag=LDO50_RS20325;partial=true;product=GntR family transcriptional regulator;protein_id=WP_224020073.1;start_range=.,687;transl_table=11 ##sequence-region NZ_CAJZAO010000283.1 1 689 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000283.1 RefSeq region 1 689 . + . ID=NZ_CAJZAO010000283.1:1..689;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_353 NZ_CAJZAO010000283.1 RefSeq pseudogene 224 415 . - . ID=gene-LDO50_RS31920;Name=LDO50_RS31920;end_range=415,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31920;old_locus_tag=BVI1335_3530001;partial=true;pseudo=true NZ_CAJZAO010000283.1 Protein Homology CDS 224 415 . - 0 ID=cds-LDO50_RS31920;Parent=gene-LDO50_RS31920;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=415,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026842.1;locus_tag=LDO50_RS31920;partial=true;product=type II secretion system protein GspH;pseudo=true;transl_table=11 NZ_CAJZAO010000283.1 RefSeq pseudogene 426 689 . - . ID=gene-LDO50_RS31925;Name=LDO50_RS31925;end_range=689,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31925;old_locus_tag=BVI1335_3530002;partial=true;pseudo=true;start_range=.,426 NZ_CAJZAO010000283.1 Protein Homology CDS 426 689 . - 2 ID=cds-LDO50_RS31925;Parent=gene-LDO50_RS31925;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=689,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725291.1;locus_tag=LDO50_RS31925;partial=true;product=type II secretion system protein GspH;pseudo=true;start_range=.,426;transl_table=11 ##sequence-region NZ_CAJZAO010000284.1 1 4132 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000284.1 RefSeq region 1 4132 . + . ID=NZ_CAJZAO010000284.1:1..4132;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_354 NZ_CAJZAO010000284.1 RefSeq gene 1 1218 . + . ID=gene-LDO50_RS20330;Name=LDO50_RS20330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20330;old_locus_tag=BVI1335_3540001;partial=true;start_range=.,1 NZ_CAJZAO010000284.1 Protein Homology CDS 1 1218 . + 0 ID=cds-WP_224020074.1;Parent=gene-LDO50_RS20330;Dbxref=GenBank:WP_224020074.1;Name=WP_224020074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723602.1;locus_tag=LDO50_RS20330;partial=true;product=hypothetical protein;protein_id=WP_224020074.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000284.1 RefSeq gene 1346 3046 . - . ID=gene-LDO50_RS20335;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=LDO50_RS20335;old_locus_tag=BVI1335_3540002 NZ_CAJZAO010000284.1 Protein Homology CDS 1346 3046 . - 0 ID=cds-WP_046423966.1;Parent=gene-LDO50_RS20335;Dbxref=GenBank:WP_046423966.1;Name=WP_046423966.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723601.1;locus_tag=LDO50_RS20335;product=apolipoprotein N-acyltransferase;protein_id=WP_046423966.1;transl_table=11 NZ_CAJZAO010000284.1 RefSeq gene 3098 3985 . - . ID=gene-LDO50_RS20340;Name=LDO50_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20340;old_locus_tag=BVI1335_3540003 NZ_CAJZAO010000284.1 Protein Homology CDS 3098 3985 . - 0 ID=cds-WP_011885962.1;Parent=gene-LDO50_RS20340;Dbxref=GenBank:WP_011885962.1;Name=WP_011885962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024598.1;locus_tag=LDO50_RS20340;product=HlyC/CorC family transporter;protein_id=WP_011885962.1;transl_table=11 ##sequence-region NZ_CAJZAO010000285.1 1 951 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000285.1 RefSeq region 1 951 . + . ID=NZ_CAJZAO010000285.1:1..951;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_355 NZ_CAJZAO010000285.1 RefSeq gene 1 279 . - . ID=gene-LDO50_RS20345;Name=LDO50_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20345;partial=true;start_range=.,1 NZ_CAJZAO010000285.1 Protein Homology CDS 1 279 . - 0 ID=cds-WP_224020075.1;Parent=gene-LDO50_RS20345;Dbxref=GenBank:WP_224020075.1;Name=WP_224020075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494752.1;locus_tag=LDO50_RS20345;partial=true;product=fibronectin type III domain-containing protein;protein_id=WP_224020075.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000285.1 RefSeq gene 263 676 . + . ID=gene-LDO50_RS20350;Name=LDO50_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20350 NZ_CAJZAO010000285.1 GeneMarkS-2+ CDS 263 676 . + 0 ID=cds-WP_224020076.1;Parent=gene-LDO50_RS20350;Dbxref=GenBank:WP_224020076.1;Name=WP_224020076.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS20350;product=hypothetical protein;protein_id=WP_224020076.1;transl_table=11 NZ_CAJZAO010000285.1 RefSeq pseudogene 768 951 . - . ID=gene-LDO50_RS20355;Name=LDO50_RS20355;end_range=951,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS20355;old_locus_tag=BVI1335_3550003;partial=true;pseudo=true NZ_CAJZAO010000285.1 Protein Homology CDS 768 951 . - 1 ID=cds-LDO50_RS20355;Parent=gene-LDO50_RS20355;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=951,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355013.1;locus_tag=LDO50_RS20355;partial=true;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000286.1 1 3917 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000286.1 RefSeq region 1 3917 . + . ID=NZ_CAJZAO010000286.1:1..3917;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_356 NZ_CAJZAO010000286.1 RefSeq gene 440 1006 . + . ID=gene-LDO50_RS20360;Name=LDO50_RS20360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20360;old_locus_tag=BVI1335_3560001 NZ_CAJZAO010000286.1 Protein Homology CDS 440 1006 . + 0 ID=cds-WP_045578048.1;Parent=gene-LDO50_RS20360;Dbxref=GenBank:WP_045578048.1;Name=WP_045578048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755516.1;locus_tag=LDO50_RS20360;product=cysteine dioxygenase;protein_id=WP_045578048.1;transl_table=11 NZ_CAJZAO010000286.1 RefSeq gene 1092 2768 . + . ID=gene-LDO50_RS20365;Name=LDO50_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20365;old_locus_tag=BVI1335_3560002 NZ_CAJZAO010000286.1 Protein Homology CDS 1092 2768 . + 0 ID=cds-WP_224020077.1;Parent=gene-LDO50_RS20365;Dbxref=GenBank:WP_224020077.1;Name=WP_224020077.1;Ontology_term=GO:0009058;gbkey=CDS;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365959.1;locus_tag=LDO50_RS20365;product=cobaltochelatase subunit CobN;protein_id=WP_224020077.1;transl_table=11 NZ_CAJZAO010000286.1 RefSeq gene 2765 3853 . + . ID=gene-LDO50_RS20370;Name=LDO50_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20370;old_locus_tag=BVI1335_3560003 NZ_CAJZAO010000286.1 Protein Homology CDS 2765 3853 . + 0 ID=cds-WP_059568158.1;Parent=gene-LDO50_RS20370;Dbxref=GenBank:WP_059568158.1;Name=WP_059568158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404820.1;locus_tag=LDO50_RS20370;product=ATP-binding protein;protein_id=WP_059568158.1;transl_table=11 ##sequence-region NZ_CAJZAO010000287.1 1 3210 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000287.1 RefSeq region 1 3210 . + . ID=NZ_CAJZAO010000287.1:1..3210;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_357 NZ_CAJZAO010000287.1 RefSeq gene 1 857 . - . ID=gene-LDO50_RS20375;Name=LDO50_RS20375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20375;partial=true;start_range=.,1 NZ_CAJZAO010000287.1 Protein Homology CDS 1 857 . - 0 ID=cds-WP_224020078.1;Parent=gene-LDO50_RS20375;Dbxref=GenBank:WP_224020078.1;Name=WP_224020078.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338435.1;locus_tag=LDO50_RS20375;partial=true;product=glycosyltransferase family 87 protein;protein_id=WP_224020078.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000287.1 RefSeq pseudogene 874 1872 . - . ID=gene-LDO50_RS20380;Name=LDO50_RS20380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS20380;pseudo=true NZ_CAJZAO010000287.1 Protein Homology CDS 874 1872 . - 0 ID=cds-LDO50_RS20380;Parent=gene-LDO50_RS20380;Note=frameshifted;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760803.1;locus_tag=LDO50_RS20380;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=11 NZ_CAJZAO010000287.1 RefSeq gene 2129 2503 . + . ID=gene-LDO50_RS20385;Name=LDO50_RS20385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20385;old_locus_tag=BVI1335_3570005 NZ_CAJZAO010000287.1 Protein Homology CDS 2129 2503 . + 0 ID=cds-WP_011881903.1;Parent=gene-LDO50_RS20385;Dbxref=GenBank:WP_011881903.1;Name=WP_011881903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217250.1;locus_tag=LDO50_RS20385;product=phage protein NinX family protein;protein_id=WP_011881903.1;transl_table=11 NZ_CAJZAO010000287.1 RefSeq gene 2520 3210 . - . ID=gene-LDO50_RS20390;Name=LDO50_RS20390;end_range=3210,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20390;old_locus_tag=BVI1335_3570006;partial=true NZ_CAJZAO010000287.1 Protein Homology CDS 2520 3210 . - 1 ID=cds-WP_224020079.1;Parent=gene-LDO50_RS20390;Dbxref=GenBank:WP_224020079.1;Name=WP_224020079.1;end_range=3210,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881904.1;locus_tag=LDO50_RS20390;partial=true;product=ABC transporter substrate-binding protein;protein_id=WP_224020079.1;transl_table=11 ##sequence-region NZ_CAJZAO010000288.1 1 1492 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000288.1 RefSeq region 1 1492 . + . ID=NZ_CAJZAO010000288.1:1..1492;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_358 NZ_CAJZAO010000288.1 RefSeq gene 1 894 . + . ID=gene-LDO50_RS20395;Name=LDO50_RS20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20395;old_locus_tag=BVI1335_3580001;partial=true;start_range=.,1 NZ_CAJZAO010000288.1 Protein Homology CDS 1 894 . + 0 ID=cds-WP_224020080.1;Parent=gene-LDO50_RS20395;Dbxref=GenBank:WP_224020080.1;Name=WP_224020080.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480289.1;locus_tag=LDO50_RS20395;partial=true;product=glycosyltransferase;protein_id=WP_224020080.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000288.1 RefSeq pseudogene 1013 1492 . - . ID=gene-LDO50_RS20400;Name=LDO50_RS20400;end_range=1492,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS20400;old_locus_tag=BVI1335_3580003;partial=true;pseudo=true NZ_CAJZAO010000288.1 Protein Homology CDS 1013 1492 . - 0 ID=cds-LDO50_RS20400;Parent=gene-LDO50_RS20400;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1492,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339215.1;locus_tag=LDO50_RS20400;partial=true;product=phage tail protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000289.1 1 696 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000289.1 RefSeq region 1 696 . + . ID=NZ_CAJZAO010000289.1:1..696;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_359 NZ_CAJZAO010000289.1 RefSeq gene 196 696 . + . ID=gene-LDO50_RS20405;Name=LDO50_RS20405;end_range=696,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20405;partial=true NZ_CAJZAO010000289.1 Protein Homology CDS 196 696 . + 0 ID=cds-WP_224020081.1;Parent=gene-LDO50_RS20405;Dbxref=GenBank:WP_224020081.1;Name=WP_224020081.1;Ontology_term=GO:0030170;end_range=696,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495788.1;locus_tag=LDO50_RS20405;partial=true;product=cysteine desulfurase family protein;protein_id=WP_224020081.1;transl_table=11 ##sequence-region NZ_CAJZAO010000290.1 1 26979 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000290.1 RefSeq region 1 26979 . + . ID=NZ_CAJZAO010000290.1:1..26979;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_36 NZ_CAJZAO010000290.1 RefSeq gene 1 352 . - . ID=gene-LDO50_RS20410;Name=LDO50_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20410;partial=true;start_range=.,1 NZ_CAJZAO010000290.1 Protein Homology CDS 1 352 . - 0 ID=cds-WP_224020082.1;Parent=gene-LDO50_RS20410;Dbxref=GenBank:WP_224020082.1;Name=WP_224020082.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004551052.1;locus_tag=LDO50_RS20410;partial=true;product=Hpt domain-containing protein;protein_id=WP_224020082.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq gene 386 763 . - . ID=gene-LDO50_RS20415;Name=LDO50_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20415;old_locus_tag=BVI1335_360002 NZ_CAJZAO010000290.1 Protein Homology CDS 386 763 . - 0 ID=cds-WP_011882905.1;Parent=gene-LDO50_RS20415;Dbxref=GenBank:WP_011882905.1;Name=WP_011882905.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482646.1;locus_tag=LDO50_RS20415;product=response regulator;protein_id=WP_011882905.1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq gene 787 1803 . - . ID=gene-LDO50_RS20420;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=LDO50_RS20420;old_locus_tag=BVI1335_360003 NZ_CAJZAO010000290.1 Protein Homology CDS 787 1803 . - 0 ID=cds-WP_011882904.1;Parent=gene-LDO50_RS20420;Dbxref=GenBank:WP_011882904.1;Name=WP_011882904.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895557.1;locus_tag=LDO50_RS20420;product=flagellar motor protein MotB;protein_id=WP_011882904.1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq gene 1817 2677 . - . ID=gene-LDO50_RS20425;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=LDO50_RS20425;old_locus_tag=BVI1335_360004 NZ_CAJZAO010000290.1 Protein Homology CDS 1817 2677 . - 0 ID=cds-WP_011882903.1;Parent=gene-LDO50_RS20425;Dbxref=GenBank:WP_011882903.1;Name=WP_011882903.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013090904.1;locus_tag=LDO50_RS20425;product=flagellar motor stator protein MotA;protein_id=WP_011882903.1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq gene 2857 3411 . - . ID=gene-LDO50_RS20430;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=LDO50_RS20430;old_locus_tag=BVI1335_360005 NZ_CAJZAO010000290.1 Protein Homology CDS 2857 3411 . - 0 ID=cds-WP_011882902.1;Parent=gene-LDO50_RS20430;Dbxref=GenBank:WP_011882902.1;Name=WP_011882902.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760462.1;locus_tag=LDO50_RS20430;product=flagellar transcriptional regulator FlhC;protein_id=WP_011882902.1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq gene 3506 3826 . - . ID=gene-LDO50_RS20435;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=LDO50_RS20435;old_locus_tag=BVI1335_360007 NZ_CAJZAO010000290.1 Protein Homology CDS 3506 3826 . - 0 ID=cds-WP_034193026.1;Parent=gene-LDO50_RS20435;Dbxref=GenBank:WP_034193026.1;Name=WP_034193026.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198199.1;locus_tag=LDO50_RS20435;product=flagellar transcriptional regulator FlhD;protein_id=WP_034193026.1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq gene 4477 5541 . + . ID=gene-LDO50_RS20440;Name=LDO50_RS20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20440;old_locus_tag=BVI1335_360009 NZ_CAJZAO010000290.1 Protein Homology CDS 4477 5541 . + 0 ID=cds-WP_014722229.1;Parent=gene-LDO50_RS20440;Dbxref=GenBank:WP_014722229.1;Name=WP_014722229.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415729.1;locus_tag=LDO50_RS20440;product=glycosyltransferase family 4 protein;protein_id=WP_014722229.1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq gene 5685 5981 . - . ID=gene-LDO50_RS20445;Name=LDO50_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20445;old_locus_tag=BVI1335_360010 NZ_CAJZAO010000290.1 Protein Homology CDS 5685 5981 . - 0 ID=cds-WP_011882898.1;Parent=gene-LDO50_RS20445;Dbxref=GenBank:WP_011882898.1;Name=WP_011882898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762906.1;locus_tag=LDO50_RS20445;product=H-NS histone family protein;protein_id=WP_011882898.1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq gene 6277 7014 . + . ID=gene-LDO50_RS20450;Name=aqpZ;gbkey=Gene;gene=aqpZ;gene_biotype=protein_coding;locus_tag=LDO50_RS20450;old_locus_tag=BVI1335_360011 NZ_CAJZAO010000290.1 Protein Homology CDS 6277 7014 . + 0 ID=cds-WP_034192943.1;Parent=gene-LDO50_RS20450;Dbxref=GenBank:WP_034192943.1;Name=WP_034192943.1;Ontology_term=GO:0006833,GO:0015250;gbkey=CDS;gene=aqpZ;go_function=water channel activity|0015250||IEA;go_process=water transport|0006833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212508.1;locus_tag=LDO50_RS20450;product=aquaporin Z;protein_id=WP_034192943.1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq gene 7120 7953 . - . ID=gene-LDO50_RS20455;Name=LDO50_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20455;old_locus_tag=BVI1335_360012 NZ_CAJZAO010000290.1 Protein Homology CDS 7120 7953 . - 0 ID=cds-WP_175898649.1;Parent=gene-LDO50_RS20455;Dbxref=GenBank:WP_175898649.1;Name=WP_175898649.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895550.1;locus_tag=LDO50_RS20455;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_175898649.1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq gene 8073 8954 . - . ID=gene-LDO50_RS20460;Name=LDO50_RS20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20460;old_locus_tag=BVI1335_360013 NZ_CAJZAO010000290.1 Protein Homology CDS 8073 8954 . - 0 ID=cds-WP_176300667.1;Parent=gene-LDO50_RS20460;Dbxref=GenBank:WP_176300667.1;Name=WP_176300667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760457.1;locus_tag=LDO50_RS20460;product=BadF/BadG/BcrA/BcrD ATPase family protein;protein_id=WP_176300667.1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq gene 9096 9698 . + . ID=gene-LDO50_RS20465;Name=LDO50_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20465;old_locus_tag=BVI1335_360014 NZ_CAJZAO010000290.1 Protein Homology CDS 9096 9698 . + 0 ID=cds-WP_059741128.1;Parent=gene-LDO50_RS20465;Dbxref=GenBank:WP_059741128.1;Name=WP_059741128.1;Ontology_term=GO:0006284,GO:0008725;gbkey=CDS;go_function=DNA-3-methyladenine glycosylase activity|0008725||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401407.1;locus_tag=LDO50_RS20465;product=DNA-3-methyladenine glycosylase I;protein_id=WP_059741128.1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq gene 9948 10160 . - . ID=gene-LDO50_RS20470;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=LDO50_RS20470;old_locus_tag=BVI1335_360015 NZ_CAJZAO010000290.1 Protein Homology CDS 9948 10160 . - 0 ID=cds-WP_006401410.1;Parent=gene-LDO50_RS20470;Dbxref=GenBank:WP_006401410.1;Name=WP_006401410.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198205.1;locus_tag=LDO50_RS20470;product=30S ribosomal protein S21;protein_id=WP_006401410.1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq gene 10702 11520 . + . ID=gene-LDO50_RS20475;Name=LDO50_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20475;old_locus_tag=BVI1335_360016 NZ_CAJZAO010000290.1 Protein Homology CDS 10702 11520 . + 0 ID=cds-WP_014722224.1;Parent=gene-LDO50_RS20475;Dbxref=GenBank:WP_014722224.1;Name=WP_014722224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010096443.1;locus_tag=LDO50_RS20475;product=flagellin domain-containing protein;protein_id=WP_014722224.1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq gene 11710 13128 . + . ID=gene-LDO50_RS20480;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=LDO50_RS20480;old_locus_tag=BVI1335_360017 NZ_CAJZAO010000290.1 Protein Homology CDS 11710 13128 . + 0 ID=cds-WP_059568068.1;Parent=gene-LDO50_RS20480;Dbxref=GenBank:WP_059568068.1;Name=WP_059568068.1;Ontology_term=GO:0007155,GO:0009288;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722223.1;locus_tag=LDO50_RS20480;product=flagellar filament capping protein FliD;protein_id=WP_059568068.1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq gene 13152 13448 . + . ID=gene-LDO50_RS20485;Name=LDO50_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20485;old_locus_tag=BVI1335_360018 NZ_CAJZAO010000290.1 Protein Homology CDS 13152 13448 . + 0 ID=cds-WP_034192949.1;Parent=gene-LDO50_RS20485;Dbxref=GenBank:WP_034192949.1;Name=WP_034192949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722222.1;locus_tag=LDO50_RS20485;product=flagellar protein FliT;protein_id=WP_034192949.1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq gene 13670 16156 . - . ID=gene-LDO50_RS20490;Name=LDO50_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20490;old_locus_tag=BVI1335_360019 NZ_CAJZAO010000290.1 Protein Homology CDS 13670 16156 . - 0 ID=cds-WP_059741131.1;Parent=gene-LDO50_RS20490;Dbxref=GenBank:WP_059741131.1;Name=WP_059741131.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722221.1;locus_tag=LDO50_RS20490;product=tetratricopeptide repeat protein;protein_id=WP_059741131.1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq gene 16153 18351 . - . ID=gene-LDO50_RS20495;Name=LDO50_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20495;old_locus_tag=BVI1335_360020 NZ_CAJZAO010000290.1 Protein Homology CDS 16153 18351 . - 0 ID=cds-WP_059621863.1;Parent=gene-LDO50_RS20495;Dbxref=GenBank:WP_059621863.1;Name=WP_059621863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350577.1;locus_tag=LDO50_RS20495;product=tetratricopeptide repeat protein;protein_id=WP_059621863.1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq gene 18410 18619 . + . ID=gene-LDO50_RS31930;Name=LDO50_RS31930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31930 NZ_CAJZAO010000290.1 GeneMarkS-2+ CDS 18410 18619 . + 0 ID=cds-WP_443797841.1;Parent=gene-LDO50_RS31930;Dbxref=GenBank:WP_443797841.1;Name=WP_443797841.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS31930;product=hypothetical protein;protein_id=WP_443797841.1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq gene 18626 20413 . - . ID=gene-LDO50_RS20500;Name=LDO50_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20500;old_locus_tag=BVI1335_360022 NZ_CAJZAO010000290.1 Protein Homology CDS 18626 20413 . - 0 ID=cds-WP_224020083.1;Parent=gene-LDO50_RS20500;Dbxref=GenBank:WP_224020083.1;Name=WP_224020083.1;Ontology_term=GO:0005515,GO:0016757;gbkey=CDS;go_function=protein binding|0005515||IEA,glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099334.1;locus_tag=LDO50_RS20500;product=O-linked N-acetylglucosamine transferase%2C SPINDLY family protein;protein_id=WP_224020083.1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq gene 20412 20675 . + . ID=gene-LDO50_RS20505;Name=LDO50_RS20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20505;old_locus_tag=BVI1335_360023 NZ_CAJZAO010000290.1 GeneMarkS-2+ CDS 20412 20675 . + 0 ID=cds-WP_041493726.1;Parent=gene-LDO50_RS20505;Dbxref=GenBank:WP_041493726.1;Name=WP_041493726.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS20505;product=hypothetical protein;protein_id=WP_041493726.1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq gene 20820 21605 . + . ID=gene-LDO50_RS20510;Name=LDO50_RS20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20510;old_locus_tag=BVI1335_360024 NZ_CAJZAO010000290.1 Protein Homology CDS 20820 21605 . + 0 ID=cds-WP_014722216.1;Parent=gene-LDO50_RS20510;Dbxref=GenBank:WP_014722216.1;Name=WP_014722216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722216.1;locus_tag=LDO50_RS20510;product=class I SAM-dependent methyltransferase;protein_id=WP_014722216.1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq gene 21602 22987 . + . ID=gene-LDO50_RS20515;Name=LDO50_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20515;old_locus_tag=BVI1335_360025 NZ_CAJZAO010000290.1 Protein Homology CDS 21602 22987 . + 0 ID=cds-WP_059462313.1;Parent=gene-LDO50_RS20515;Dbxref=GenBank:WP_059462313.1;Name=WP_059462313.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751056.1;locus_tag=LDO50_RS20515;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_059462313.1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq gene 22984 23706 . + . ID=gene-LDO50_RS20520;Name=LDO50_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20520;old_locus_tag=BVI1335_360026 NZ_CAJZAO010000290.1 Protein Homology CDS 22984 23706 . + 0 ID=cds-WP_155624608.1;Parent=gene-LDO50_RS20520;Dbxref=GenBank:WP_155624608.1;Name=WP_155624608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722214.1;locus_tag=LDO50_RS20520;product=WbqC family protein;protein_id=WP_155624608.1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq gene 23717 24364 . + . ID=gene-LDO50_RS20525;Name=LDO50_RS20525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20525;old_locus_tag=BVI1335_360027 NZ_CAJZAO010000290.1 Protein Homology CDS 23717 24364 . + 0 ID=cds-WP_014722213.1;Parent=gene-LDO50_RS20525;Dbxref=GenBank:WP_014722213.1;Name=WP_014722213.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722213.1;locus_tag=LDO50_RS20525;product=class I SAM-dependent methyltransferase;protein_id=WP_014722213.1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq gene 24423 25580 . + . ID=gene-LDO50_RS20530;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=LDO50_RS20530;old_locus_tag=BVI1335_360028 NZ_CAJZAO010000290.1 Protein Homology CDS 24423 25580 . + 0 ID=cds-WP_014722212.1;Parent=gene-LDO50_RS20530;Dbxref=GenBank:WP_014722212.1;Name=WP_014722212.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099338.1;locus_tag=LDO50_RS20530;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_014722212.1;transl_table=11 NZ_CAJZAO010000290.1 RefSeq pseudogene 25700 26979 . + . ID=gene-LDO50_RS20535;Name=LDO50_RS20535;end_range=26979,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS20535;partial=true;pseudo=true NZ_CAJZAO010000290.1 Protein Homology CDS 25700 26979 . + 0 ID=cds-LDO50_RS20535;Parent=gene-LDO50_RS20535;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=26979,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722210.1;locus_tag=LDO50_RS20535;partial=true;product=glycosyltransferase family 1 protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000291.1 1 698 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000291.1 RefSeq region 1 698 . + . ID=NZ_CAJZAO010000291.1:1..698;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_360 NZ_CAJZAO010000291.1 RefSeq pseudogene 1 140 . + . ID=gene-LDO50_RS31935;Name=LDO50_RS31935;end_range=140,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31935;old_locus_tag=BVI1335_3600001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000291.1 Protein Homology CDS 1 140 . + 2 ID=cds-LDO50_RS31935;Parent=gene-LDO50_RS31935;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=140,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191733.1;locus_tag=LDO50_RS31935;partial=true;product=polysaccharide deacetylase family protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000291.1 RefSeq gene 151 520 . + . ID=gene-LDO50_RS20540;Name=LDO50_RS20540;end_range=520,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20540;old_locus_tag=BVI1335_3600002;partial=true;start_range=.,151 NZ_CAJZAO010000291.1 Protein Homology CDS 151 520 . + 1 ID=cds-WP_443797842.1;Parent=gene-LDO50_RS20540;Dbxref=GenBank:WP_443797842.1;Name=WP_443797842.1;Ontology_term=GO:0005975,GO:0016810;end_range=520,.;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191733.1;locus_tag=LDO50_RS20540;partial=true;product=polysaccharide deacetylase family protein;protein_id=WP_443797842.1;start_range=.,151;transl_table=11 ##sequence-region NZ_CAJZAO010000292.1 1 541 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000292.1 RefSeq region 1 541 . + . ID=NZ_CAJZAO010000292.1:1..541;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_361 NZ_CAJZAO010000292.1 RefSeq pseudogene 250 541 . - . ID=gene-LDO50_RS20545;Name=LDO50_RS20545;end_range=541,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS20545;old_locus_tag=BVI1335_3610001;partial=true;pseudo=true NZ_CAJZAO010000292.1 Protein Homology CDS 250 541 . - 1 ID=cds-LDO50_RS20545;Parent=gene-LDO50_RS20545;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=541,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896188.1;locus_tag=LDO50_RS20545;partial=true;product=purine permease;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000293.1 1 1839 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000293.1 RefSeq region 1 1839 . + . ID=NZ_CAJZAO010000293.1:1..1839;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_362 NZ_CAJZAO010000293.1 RefSeq pseudogene 1 311 . + . ID=gene-LDO50_RS20550;Name=LDO50_RS20550;end_range=311,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS20550;old_locus_tag=BVI1335_3620001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000293.1 Protein Homology CDS 1 311 . + 2 ID=cds-LDO50_RS20550;Parent=gene-LDO50_RS20550;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=311,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337180.1;locus_tag=LDO50_RS20550;partial=true;product=gamma-glutamyltransferase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000293.1 RefSeq gene 326 371 . + . ID=gene-LDO50_RS31940;Name=LDO50_RS31940;end_range=371,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31940;partial=true NZ_CAJZAO010000293.1 Protein Homology CDS 326 371 . + 0 ID=cds-WP_443797844.1;Parent=gene-LDO50_RS31940;Dbxref=GenBank:WP_443797844.1;Name=WP_443797844.1;end_range=371,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013434.6;locus_tag=LDO50_RS31940;partial=true;product=hypothetical protein;protein_id=WP_443797844.1;transl_table=11 NZ_CAJZAO010000293.1 RefSeq gene 382 1060 . + . ID=gene-LDO50_RS20555;Name=LDO50_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20555;old_locus_tag=BVI1335_3620002;partial=true;start_range=.,382 NZ_CAJZAO010000293.1 Protein Homology CDS 382 1060 . + 1 ID=cds-WP_443797843.1;Parent=gene-LDO50_RS20555;Dbxref=GenBank:WP_443797843.1;Name=WP_443797843.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479669.1;locus_tag=LDO50_RS20555;partial=true;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_443797843.1;start_range=.,382;transl_table=11 NZ_CAJZAO010000293.1 RefSeq gene 1057 1839 . + . ID=gene-LDO50_RS20560;Name=LDO50_RS20560;end_range=1839,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20560;partial=true NZ_CAJZAO010000293.1 Protein Homology CDS 1057 1839 . + 0 ID=cds-WP_224020085.1;Parent=gene-LDO50_RS20560;Dbxref=GenBank:WP_224020085.1;Name=WP_224020085.1;end_range=1839,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548368.1;locus_tag=LDO50_RS20560;partial=true;product=extracellular solute-binding protein;protein_id=WP_224020085.1;transl_table=11 ##sequence-region NZ_CAJZAO010000294.1 1 1502 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000294.1 RefSeq region 1 1502 . + . ID=NZ_CAJZAO010000294.1:1..1502;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_363 NZ_CAJZAO010000294.1 RefSeq gene 1 1502 . - . ID=gene-LDO50_RS20565;Name=bcsE;end_range=1502,.;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=LDO50_RS20565;partial=true;start_range=.,1 NZ_CAJZAO010000294.1 Protein Homology CDS 1 1502 . - 0 ID=cds-WP_224020086.1;Parent=gene-LDO50_RS20565;Dbxref=GenBank:WP_224020086.1;Name=WP_224020086.1;Ontology_term=GO:0035438;end_range=1502,.;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884386.1;locus_tag=LDO50_RS20565;partial=true;product=cellulose biosynthesis protein BcsE;protein_id=WP_224020086.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAO010000295.1 1 638 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000295.1 RefSeq region 1 638 . + . ID=NZ_CAJZAO010000295.1:1..638;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_364 NZ_CAJZAO010000295.1 RefSeq gene 1 638 . + . ID=gene-LDO50_RS20570;Name=LDO50_RS20570;end_range=638,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20570;partial=true;start_range=.,1 NZ_CAJZAO010000295.1 Protein Homology CDS 1 638 . + 1 ID=cds-WP_224020087.1;Parent=gene-LDO50_RS20570;Dbxref=GenBank:WP_224020087.1;Name=WP_224020087.1;Ontology_term=GO:0016020;end_range=638,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364717.1;locus_tag=LDO50_RS20570;partial=true;product=MMPL family transporter;protein_id=WP_224020087.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAO010000296.1 1 3233 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000296.1 RefSeq region 1 3233 . + . ID=NZ_CAJZAO010000296.1:1..3233;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_365 NZ_CAJZAO010000296.1 RefSeq gene 63 2405 . - . ID=gene-LDO50_RS20575;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=LDO50_RS20575;old_locus_tag=BVI1335_3650001 NZ_CAJZAO010000296.1 Protein Homology CDS 63 2405 . - 0 ID=cds-WP_176315315.1;Parent=gene-LDO50_RS20575;Dbxref=GenBank:WP_176315315.1;Name=WP_176315315.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545161.1;locus_tag=LDO50_RS20575;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_176315315.1;transl_table=11 NZ_CAJZAO010000296.1 RefSeq pseudogene 3025 3233 . - . ID=gene-LDO50_RS20580;Name=LDO50_RS20580;end_range=3233,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS20580;partial=true;pseudo=true NZ_CAJZAO010000296.1 Protein Homology CDS 3025 3233 . - 2 ID=cds-LDO50_RS20580;Parent=gene-LDO50_RS20580;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3233,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722838.1;locus_tag=LDO50_RS20580;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000297.1 1 4207 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000297.1 RefSeq region 1 4207 . + . ID=NZ_CAJZAO010000297.1:1..4207;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_366 NZ_CAJZAO010000297.1 RefSeq pseudogene 1 279 . + . ID=gene-LDO50_RS20585;Name=LDO50_RS20585;end_range=279,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS20585;old_locus_tag=BVI1335_3660001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000297.1 Protein Homology CDS 1 279 . + 0 ID=cds-LDO50_RS20585;Parent=gene-LDO50_RS20585;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=279,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328857.1;locus_tag=LDO50_RS20585;partial=true;product=acetyltransferase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000297.1 RefSeq gene 290 452 . + . ID=gene-LDO50_RS30875;Name=LDO50_RS30875;end_range=452,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30875;partial=true;start_range=.,290 NZ_CAJZAO010000297.1 Protein Homology CDS 290 452 . + 1 ID=cds-WP_443797845.1;Parent=gene-LDO50_RS30875;Dbxref=GenBank:WP_443797845.1;Name=WP_443797845.1;end_range=452,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364268.1;locus_tag=LDO50_RS30875;partial=true;product=FAD-binding domain-containing protein;protein_id=WP_443797845.1;start_range=.,290;transl_table=11 NZ_CAJZAO010000297.1 RefSeq gene 504 1736 . - . ID=gene-LDO50_RS20595;Name=LDO50_RS20595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20595;old_locus_tag=BVI1335_3660003 NZ_CAJZAO010000297.1 Protein Homology CDS 504 1736 . - 0 ID=cds-WP_034194573.1;Parent=gene-LDO50_RS20595;Dbxref=GenBank:WP_034194573.1;Name=WP_034194573.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896574.1;locus_tag=LDO50_RS20595;product=MFS transporter;protein_id=WP_034194573.1;transl_table=11 NZ_CAJZAO010000297.1 RefSeq gene 2213 3154 . - . ID=gene-LDO50_RS20600;Name=LDO50_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20600;old_locus_tag=BVI1335_3660005 NZ_CAJZAO010000297.1 Protein Homology CDS 2213 3154 . - 0 ID=cds-WP_034194572.1;Parent=gene-LDO50_RS20600;Dbxref=GenBank:WP_034194572.1;Name=WP_034194572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364265.1;locus_tag=LDO50_RS20600;product=LysR substrate-binding domain-containing protein;protein_id=WP_034194572.1;transl_table=11 NZ_CAJZAO010000297.1 RefSeq gene 3275 4207 . + . ID=gene-LDO50_RS20605;Name=LDO50_RS20605;end_range=4207,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20605;partial=true NZ_CAJZAO010000297.1 Protein Homology CDS 3275 4207 . + 0 ID=cds-WP_224020088.1;Parent=gene-LDO50_RS20605;Dbxref=GenBank:WP_224020088.1;Name=WP_224020088.1;end_range=4207,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328852.1;locus_tag=LDO50_RS20605;partial=true;product=alpha/beta hydrolase family protein;protein_id=WP_224020088.1;transl_table=11 ##sequence-region NZ_CAJZAO010000298.1 1 1703 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000298.1 RefSeq region 1 1703 . + . ID=NZ_CAJZAO010000298.1:1..1703;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_367 NZ_CAJZAO010000298.1 RefSeq gene 1 533 . - . ID=gene-LDO50_RS20610;Name=LDO50_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20610;partial=true;start_range=.,1 NZ_CAJZAO010000298.1 Protein Homology CDS 1 533 . - 0 ID=cds-WP_224020089.1;Parent=gene-LDO50_RS20610;Dbxref=GenBank:WP_224020089.1;Name=WP_224020089.1;Ontology_term=GO:0005515,GO:0070064;gbkey=CDS;go_function=protein binding|0005515||IEA,proline-rich region binding|0070064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725072.1;locus_tag=LDO50_RS20610;partial=true;product=SH3 domain-containing protein;protein_id=WP_224020089.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000298.1 RefSeq gene 567 1019 . - . ID=gene-LDO50_RS20615;Name=LDO50_RS20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20615;old_locus_tag=BVI1335_3670002 NZ_CAJZAO010000298.1 Protein Homology CDS 567 1019 . - 0 ID=cds-WP_081333194.1;Parent=gene-LDO50_RS20615;Dbxref=GenBank:WP_081333194.1;Name=WP_081333194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547931.1;locus_tag=LDO50_RS20615;product=hypothetical protein;protein_id=WP_081333194.1;transl_table=11 NZ_CAJZAO010000298.1 RefSeq pseudogene 1217 1467 . + . ID=gene-LDO50_RS31120;Name=LDO50_RS31120;end_range=1467,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31120;partial=true;pseudo=true NZ_CAJZAO010000298.1 Protein Homology CDS 1217 1467 . + 0 ID=cds-LDO50_RS31120;Parent=gene-LDO50_RS31120;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1467,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765744.1;locus_tag=LDO50_RS31120;partial=true;product=sigma-70 family RNA polymerase sigma factor;pseudo=true;transl_table=11 NZ_CAJZAO010000298.1 RefSeq gene 1478 1703 . + . ID=gene-LDO50_RS31125;Name=LDO50_RS31125;end_range=1703,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31125;partial=true;start_range=.,1478 NZ_CAJZAO010000298.1 Protein Homology CDS 1478 1703 . + 2 ID=cds-WP_372586114.1;Parent=gene-LDO50_RS31125;Dbxref=GenBank:WP_372586114.1;Name=WP_372586114.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;end_range=1703,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881983.1;locus_tag=LDO50_RS31125;partial=true;product=sigma-70 factor domain-containing protein;protein_id=WP_372586114.1;start_range=.,1478;transl_table=11 ##sequence-region NZ_CAJZAO010000299.1 1 1696 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000299.1 RefSeq region 1 1696 . + . ID=NZ_CAJZAO010000299.1:1..1696;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_368 NZ_CAJZAO010000299.1 RefSeq gene 1 760 . + . ID=gene-LDO50_RS20625;Name=LDO50_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20625;old_locus_tag=BVI1335_3680001;partial=true;start_range=.,1 NZ_CAJZAO010000299.1 Protein Homology CDS 1 760 . + 1 ID=cds-WP_224020090.1;Parent=gene-LDO50_RS20625;Dbxref=GenBank:WP_224020090.1;Name=WP_224020090.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413094.1;locus_tag=LDO50_RS20625;partial=true;product=MFS transporter;protein_id=WP_224020090.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000299.1 RefSeq gene 840 1307 . - . ID=gene-LDO50_RS20630;Name=LDO50_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20630;old_locus_tag=BVI1335_3680002 NZ_CAJZAO010000299.1 Protein Homology CDS 840 1307 . - 0 ID=cds-WP_011881544.1;Parent=gene-LDO50_RS20630;Dbxref=GenBank:WP_011881544.1;Name=WP_011881544.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881544.1;locus_tag=LDO50_RS20630;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_011881544.1;transl_table=11 NZ_CAJZAO010000299.1 RefSeq pseudogene 1450 1696 . + . ID=gene-LDO50_RS20635;Name=LDO50_RS20635;end_range=1696,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS20635;partial=true;pseudo=true NZ_CAJZAO010000299.1 Protein Homology CDS 1450 1696 . + 0 ID=cds-LDO50_RS20635;Parent=gene-LDO50_RS20635;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1696,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493180.1;locus_tag=LDO50_RS20635;partial=true;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000300.1 1 475 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000300.1 RefSeq region 1 475 . + . ID=NZ_CAJZAO010000300.1:1..475;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_369 NZ_CAJZAO010000300.1 RefSeq gene 1 334 . - . ID=gene-LDO50_RS20640;Name=LDO50_RS20640;end_range=334,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20640;partial=true;start_range=.,1 NZ_CAJZAO010000300.1 Protein Homology CDS 1 334 . - 2 ID=cds-WP_443797846.1;Parent=gene-LDO50_RS20640;Dbxref=GenBank:WP_443797846.1;Name=WP_443797846.1;Ontology_term=GO:0005524,GO:0016887;end_range=334,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217789.1;locus_tag=LDO50_RS20640;partial=true;product=ATP-binding protein;protein_id=WP_443797846.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAO010000301.1 1 13258 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000301.1 RefSeq region 1 13258 . + . ID=NZ_CAJZAO010000301.1:1..13258;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_37 NZ_CAJZAO010000301.1 RefSeq gene 1 120 . + . ID=gene-LDO50_RS20645;Name=LDO50_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20645;partial=true;start_range=.,1 NZ_CAJZAO010000301.1 Protein Homology CDS 1 120 . + 0 ID=cds-WP_290370764.1;Parent=gene-LDO50_RS20645;Dbxref=GenBank:WP_290370764.1;Name=WP_290370764.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481672.1;locus_tag=LDO50_RS20645;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_290370764.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000301.1 RefSeq gene 476 1324 . - . ID=gene-LDO50_RS20650;Name=LDO50_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20650;old_locus_tag=BVI1335_370001 NZ_CAJZAO010000301.1 Protein Homology CDS 476 1324 . - 0 ID=cds-WP_059734667.1;Parent=gene-LDO50_RS20650;Dbxref=GenBank:WP_059734667.1;Name=WP_059734667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353752.1;locus_tag=LDO50_RS20650;product=ureidoglycolate lyase;protein_id=WP_059734667.1;transl_table=11 NZ_CAJZAO010000301.1 RefSeq gene 1763 2587 . + . ID=gene-LDO50_RS20655;Name=LDO50_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20655;old_locus_tag=BVI1335_370002 NZ_CAJZAO010000301.1 Protein Homology CDS 1763 2587 . + 0 ID=cds-WP_014724163.1;Parent=gene-LDO50_RS20655;Dbxref=GenBank:WP_014724163.1;Name=WP_014724163.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724163.1;locus_tag=LDO50_RS20655;product=IclR family transcriptional regulator;protein_id=WP_014724163.1;transl_table=11 NZ_CAJZAO010000301.1 RefSeq gene 2936 3487 . + . ID=gene-LDO50_RS20660;Name=LDO50_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20660;old_locus_tag=BVI1335_370003 NZ_CAJZAO010000301.1 Protein Homology CDS 2936 3487 . + 0 ID=cds-WP_046426717.1;Parent=gene-LDO50_RS20660;Dbxref=GenBank:WP_046426717.1;Name=WP_046426717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881030.1;locus_tag=LDO50_RS20660;product=hypothetical protein;protein_id=WP_046426717.1;transl_table=11 NZ_CAJZAO010000301.1 RefSeq gene 4202 6559 . - . ID=gene-LDO50_RS20665;Name=LDO50_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20665;old_locus_tag=BVI1335_370004 NZ_CAJZAO010000301.1 Protein Homology CDS 4202 6559 . - 0 ID=cds-WP_034193404.1;Parent=gene-LDO50_RS20665;Dbxref=GenBank:WP_034193404.1;Name=WP_034193404.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724165.1;locus_tag=LDO50_RS20665;product=GNAT family N-acetyltransferase;protein_id=WP_034193404.1;transl_table=11 NZ_CAJZAO010000301.1 RefSeq gene 7131 7427 . - . ID=gene-LDO50_RS20670;Name=LDO50_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20670;old_locus_tag=BVI1335_370006 NZ_CAJZAO010000301.1 Protein Homology CDS 7131 7427 . - 0 ID=cds-WP_011881034.1;Parent=gene-LDO50_RS20670;Dbxref=GenBank:WP_011881034.1;Name=WP_011881034.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010110637.1;locus_tag=LDO50_RS20670;product=H-NS histone family protein;protein_id=WP_011881034.1;transl_table=11 NZ_CAJZAO010000301.1 RefSeq gene 7530 7814 . - . ID=gene-LDO50_RS30990;Name=LDO50_RS30990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30990 NZ_CAJZAO010000301.1 Protein Homology CDS 7530 7814 . - 0 ID=cds-WP_308117566.1;Parent=gene-LDO50_RS30990;Dbxref=GenBank:WP_308117566.1;Name=WP_308117566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493616.1;locus_tag=LDO50_RS30990;product=hypothetical protein;protein_id=WP_308117566.1;transl_table=11 NZ_CAJZAO010000301.1 RefSeq gene 7876 8412 . - . ID=gene-LDO50_RS20675;Name=LDO50_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20675;old_locus_tag=BVI1335_370007 NZ_CAJZAO010000301.1 Protein Homology CDS 7876 8412 . - 0 ID=cds-WP_212162205.1;Parent=gene-LDO50_RS20675;Dbxref=GenBank:WP_212162205.1;Name=WP_212162205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724166.1;locus_tag=LDO50_RS20675;product=BON domain-containing protein;protein_id=WP_212162205.1;transl_table=11 NZ_CAJZAO010000301.1 RefSeq gene 8479 9963 . - . ID=gene-LDO50_RS20680;Name=LDO50_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20680;old_locus_tag=BVI1335_370008 NZ_CAJZAO010000301.1 Protein Homology CDS 8479 9963 . - 0 ID=cds-WP_060123071.1;Parent=gene-LDO50_RS20680;Dbxref=GenBank:WP_060123071.1;Name=WP_060123071.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548900.1;locus_tag=LDO50_RS20680;product=sigma-54 interaction domain-containing protein;protein_id=WP_060123071.1;transl_table=11 NZ_CAJZAO010000301.1 RefSeq gene 10280 11683 . + . ID=gene-LDO50_RS20685;Name=LDO50_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20685;old_locus_tag=BVI1335_370010 NZ_CAJZAO010000301.1 Protein Homology CDS 10280 11683 . + 0 ID=cds-WP_224020091.1;Parent=gene-LDO50_RS20685;Dbxref=GenBank:WP_224020091.1;Name=WP_224020091.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757738.1;locus_tag=LDO50_RS20685;product=GntP family permease;protein_id=WP_224020091.1;transl_table=11 NZ_CAJZAO010000301.1 RefSeq gene 12146 12427 . + . ID=gene-LDO50_RS20690;Name=LDO50_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20690;old_locus_tag=BVI1335_370011 NZ_CAJZAO010000301.1 Protein Homology CDS 12146 12427 . + 0 ID=cds-WP_045577620.1;Parent=gene-LDO50_RS20690;Dbxref=GenBank:WP_045577620.1;Name=WP_045577620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754161.1;locus_tag=LDO50_RS20690;product=DUF4148 domain-containing protein;protein_id=WP_045577620.1;transl_table=11 NZ_CAJZAO010000301.1 RefSeq pseudogene 12494 13258 . - . ID=gene-LDO50_RS20695;Name=LDO50_RS20695;end_range=13258,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS20695;old_locus_tag=BVI1335_370012;partial=true;pseudo=true NZ_CAJZAO010000301.1 Protein Homology CDS 12494 13258 . - 0 ID=cds-LDO50_RS20695;Parent=gene-LDO50_RS20695;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=13258,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494349.1;locus_tag=LDO50_RS20695;partial=true;product=thioredoxin family protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000302.1 1 605 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000302.1 RefSeq region 1 605 . + . ID=NZ_CAJZAO010000302.1:1..605;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_370 NZ_CAJZAO010000302.1 RefSeq pseudogene 313 501 . - . ID=gene-LDO50_RS31945;Name=LDO50_RS31945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31945;old_locus_tag=BVI1335_3700001;partial=true;pseudo=true;start_range=.,313 NZ_CAJZAO010000302.1 Protein Homology CDS 313 501 . - 0 ID=cds-LDO50_RS31945;Parent=gene-LDO50_RS31945;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498337.1;locus_tag=LDO50_RS31945;partial=true;product=hypothetical protein;pseudo=true;start_range=.,313;transl_table=11 ##sequence-region NZ_CAJZAO010000303.1 1 795 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000303.1 RefSeq region 1 795 . + . ID=NZ_CAJZAO010000303.1:1..795;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_371 NZ_CAJZAO010000303.1 RefSeq gene 458 795 . - . ID=gene-LDO50_RS20710;Name=LDO50_RS20710;end_range=795,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20710;partial=true;start_range=.,458 NZ_CAJZAO010000303.1 Protein Homology CDS 458 795 . - 1 ID=cds-WP_443797847.1;Parent=gene-LDO50_RS20710;Dbxref=GenBank:WP_443797847.1;Name=WP_443797847.1;Ontology_term=GO:0030244,GO:0019867;end_range=795,.;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880555.1;locus_tag=LDO50_RS20710;partial=true;product=cellulose synthase subunit BcsC-related outer membrane protein;protein_id=WP_443797847.1;start_range=.,458;transl_table=11 ##sequence-region NZ_CAJZAO010000304.1 1 1540 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000304.1 RefSeq region 1 1540 . + . ID=NZ_CAJZAO010000304.1:1..1540;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_372 NZ_CAJZAO010000304.1 RefSeq gene 1 203 . + . ID=gene-LDO50_RS20715;Name=LDO50_RS20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20715;old_locus_tag=BVI1335_3720001;partial=true;start_range=.,1 NZ_CAJZAO010000304.1 Protein Homology CDS 1 203 . + 2 ID=cds-WP_224020093.1;Parent=gene-LDO50_RS20715;Dbxref=GenBank:WP_224020093.1;Name=WP_224020093.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545870.1;locus_tag=LDO50_RS20715;partial=true;product=EamA family transporter;protein_id=WP_224020093.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000304.1 RefSeq gene 455 1099 . - . ID=gene-LDO50_RS20720;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=LDO50_RS20720;old_locus_tag=BVI1335_3720002 NZ_CAJZAO010000304.1 Protein Homology CDS 455 1099 . - 0 ID=cds-WP_014723413.1;Parent=gene-LDO50_RS20720;Dbxref=GenBank:WP_014723413.1;Name=WP_014723413.1;Ontology_term=GO:0006281,GO:0140078;gbkey=CDS;gene=nth;go_function=class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892349.1;locus_tag=LDO50_RS20720;product=endonuclease III;protein_id=WP_014723413.1;transl_table=11 NZ_CAJZAO010000304.1 RefSeq pseudogene 1096 1440 . - . ID=gene-LDO50_RS20725;Name=LDO50_RS20725;end_range=1440,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS20725;old_locus_tag=BVI1335_3720003;partial=true;pseudo=true NZ_CAJZAO010000304.1 Protein Homology CDS 1096 1440 . - 0 ID=cds-LDO50_RS20725;Parent=gene-LDO50_RS20725;Note=Involved in the electron transport chain%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1440,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405622.1;locus_tag=LDO50_RS20725;partial=true;product=electron transport complex subunit RsxB;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000305.1 1 689 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000305.1 RefSeq region 1 689 . + . ID=NZ_CAJZAO010000305.1:1..689;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_373 NZ_CAJZAO010000305.1 RefSeq gene 1 301 . + . ID=gene-LDO50_RS20730;Name=LDO50_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20730;old_locus_tag=BVI1335_3730001;partial=true;start_range=.,1 NZ_CAJZAO010000305.1 Protein Homology CDS 1 301 . + 1 ID=cds-WP_290370765.1;Parent=gene-LDO50_RS20730;Dbxref=GenBank:WP_290370765.1;Name=WP_290370765.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660547.1;locus_tag=LDO50_RS20730;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_290370765.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000305.1 RefSeq pseudogene 319 457 . - . ID=gene-LDO50_RS31130;Name=LDO50_RS31130;end_range=457,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31130;partial=true;pseudo=true NZ_CAJZAO010000305.1 Protein Homology CDS 319 457 . - 1 ID=cds-LDO50_RS31130;Parent=gene-LDO50_RS31130;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=457,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879850.1;locus_tag=LDO50_RS31130;partial=true;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=11 NZ_CAJZAO010000305.1 RefSeq gene 468 689 . - . ID=gene-LDO50_RS31135;Name=LDO50_RS31135;end_range=689,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31135;old_locus_tag=BVI1335_3730003;partial=true;start_range=.,468 NZ_CAJZAO010000305.1 Protein Homology CDS 468 689 . - 1 ID=cds-WP_443797848.1;Parent=gene-LDO50_RS31135;Dbxref=GenBank:WP_443797848.1;Name=WP_443797848.1;Ontology_term=GO:0016757;end_range=689,.;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011300511.1;locus_tag=LDO50_RS31135;partial=true;product=glycosyltransferase family 2 protein;protein_id=WP_443797848.1;start_range=.,468;transl_table=11 ##sequence-region NZ_CAJZAO010000306.1 1 1290 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000306.1 RefSeq region 1 1290 . + . ID=NZ_CAJZAO010000306.1:1..1290;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_374 NZ_CAJZAO010000306.1 RefSeq gene 353 841 . - . ID=gene-LDO50_RS20740;Name=LDO50_RS20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20740;old_locus_tag=BVI1335_3740002 NZ_CAJZAO010000306.1 Protein Homology CDS 353 841 . - 0 ID=cds-WP_224020094.1;Parent=gene-LDO50_RS20740;Dbxref=GenBank:WP_224020094.1;Name=WP_224020094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217901.1;locus_tag=LDO50_RS20740;product=phage protein NinX family protein;protein_id=WP_224020094.1;transl_table=11 NZ_CAJZAO010000306.1 RefSeq gene 879 1290 . - . ID=gene-LDO50_RS20745;Name=LDO50_RS20745;end_range=1290,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20745;old_locus_tag=BVI1335_3740003;partial=true NZ_CAJZAO010000306.1 Protein Homology CDS 879 1290 . - 1 ID=cds-WP_372586115.1;Parent=gene-LDO50_RS20745;Dbxref=GenBank:WP_372586115.1;Name=WP_372586115.1;Ontology_term=GO:0003824;end_range=1290,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879953.1;locus_tag=LDO50_RS20745;partial=true;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_372586115.1;transl_table=11 ##sequence-region NZ_CAJZAO010000307.1 1 2086 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000307.1 RefSeq region 1 2086 . + . ID=NZ_CAJZAO010000307.1:1..2086;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_375 NZ_CAJZAO010000307.1 RefSeq gene 1 447 . - . ID=gene-LDO50_RS20750;Name=LDO50_RS20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20750;partial=true;start_range=.,1 NZ_CAJZAO010000307.1 Protein Homology CDS 1 447 . - 0 ID=cds-WP_224020095.1;Parent=gene-LDO50_RS20750;Dbxref=GenBank:WP_224020095.1;Name=WP_224020095.1;Ontology_term=GO:0018580;gbkey=CDS;go_function=nitronate monooxygenase activity|0018580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546697.1;locus_tag=LDO50_RS20750;partial=true;product=nitronate monooxygenase;protein_id=WP_224020095.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000307.1 RefSeq gene 670 1362 . + . ID=gene-LDO50_RS20755;Name=LDO50_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20755;old_locus_tag=BVI1335_3750002 NZ_CAJZAO010000307.1 Protein Homology CDS 670 1362 . + 0 ID=cds-WP_034192931.1;Parent=gene-LDO50_RS20755;Dbxref=GenBank:WP_034192931.1;Name=WP_034192931.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009974414.1;locus_tag=LDO50_RS20755;product=dienelactone hydrolase family protein;protein_id=WP_034192931.1;transl_table=11 NZ_CAJZAO010000307.1 RefSeq gene 1441 1926 . + . ID=gene-LDO50_RS20760;Name=LDO50_RS20760;end_range=1926,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20760;old_locus_tag=BVI1335_3750003;partial=true NZ_CAJZAO010000307.1 Protein Homology CDS 1441 1926 . + 0 ID=cds-WP_443797849.1;Parent=gene-LDO50_RS20760;Dbxref=GenBank:WP_443797849.1;Name=WP_443797849.1;end_range=1926,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895580.1;locus_tag=LDO50_RS20760;partial=true;product=amidase family protein;protein_id=WP_443797849.1;transl_table=11 NZ_CAJZAO010000307.1 RefSeq gene 1937 2086 . + . ID=gene-LDO50_RS31950;Name=LDO50_RS31950;end_range=2086,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31950;partial=true;start_range=.,1937 NZ_CAJZAO010000307.1 Protein Homology CDS 1937 2086 . + 2 ID=cds-WP_443797850.1;Parent=gene-LDO50_RS31950;Dbxref=GenBank:WP_443797850.1;Name=WP_443797850.1;end_range=2086,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895580.1;locus_tag=LDO50_RS31950;partial=true;product=amidase family protein;protein_id=WP_443797850.1;start_range=.,1937;transl_table=11 ##sequence-region NZ_CAJZAO010000308.1 1 1961 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000308.1 RefSeq region 1 1961 . + . ID=NZ_CAJZAO010000308.1:1..1961;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_376 NZ_CAJZAO010000308.1 RefSeq gene 302 511 . + . ID=gene-LDO50_RS20765;Name=LDO50_RS20765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20765 NZ_CAJZAO010000308.1 Protein Homology CDS 302 511 . + 0 ID=cds-WP_011882609.1;Parent=gene-LDO50_RS20765;Dbxref=GenBank:WP_011882609.1;Name=WP_011882609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480857.1;locus_tag=LDO50_RS20765;product=hypothetical protein;protein_id=WP_011882609.1;transl_table=11 NZ_CAJZAO010000308.1 RefSeq gene 636 1121 . + . ID=gene-LDO50_RS20770;Name=LDO50_RS20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20770;old_locus_tag=BVI1335_3760003 NZ_CAJZAO010000308.1 Protein Homology CDS 636 1121 . + 0 ID=cds-WP_011882608.1;Parent=gene-LDO50_RS20770;Dbxref=GenBank:WP_011882608.1;Name=WP_011882608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547296.1;locus_tag=LDO50_RS20770;product=hypothetical protein;protein_id=WP_011882608.1;transl_table=11 NZ_CAJZAO010000308.1 RefSeq gene 1174 1961 . + . ID=gene-LDO50_RS20775;Name=sctJ;end_range=1961,.;gbkey=Gene;gene=sctJ;gene_biotype=protein_coding;locus_tag=LDO50_RS20775;partial=true NZ_CAJZAO010000308.1 Protein Homology CDS 1174 1961 . + 0 ID=cds-WP_224020096.1;Parent=gene-LDO50_RS20775;Dbxref=GenBank:WP_224020096.1;Name=WP_224020096.1;Ontology_term=GO:0009306,GO:0030254;end_range=1961,.;gbkey=CDS;gene=sctJ;go_process=protein secretion|0009306||IEA,protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216599.1;locus_tag=LDO50_RS20775;partial=true;product=type III secretion system inner membrane ring lipoprotein SctJ;protein_id=WP_224020096.1;transl_table=11 ##sequence-region NZ_CAJZAO010000309.1 1 2211 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000309.1 RefSeq region 1 2211 . + . ID=NZ_CAJZAO010000309.1:1..2211;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_377 NZ_CAJZAO010000309.1 RefSeq gene 1 2015 . + . ID=gene-LDO50_RS20780;Name=LDO50_RS20780;end_range=2015,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20780;old_locus_tag=BVI1335_3770001;partial=true;start_range=.,1 NZ_CAJZAO010000309.1 Protein Homology CDS 1 2015 . + 0 ID=cds-WP_443797851.1;Parent=gene-LDO50_RS20780;Dbxref=GenBank:WP_443797851.1;Name=WP_443797851.1;end_range=2015,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492606.1;locus_tag=LDO50_RS20780;partial=true;product=amino acid adenylation domain-containing protein;protein_id=WP_443797851.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000309.1 RefSeq gene 2026 2211 . + . ID=gene-LDO50_RS31955;Name=LDO50_RS31955;end_range=2211,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31955;partial=true;start_range=.,2026 NZ_CAJZAO010000309.1 Protein Homology CDS 2026 2211 . + 1 ID=cds-WP_435520886.1;Parent=gene-LDO50_RS31955;Dbxref=GenBank:WP_435520886.1;Name=WP_435520886.1;end_range=2211,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884805.1;locus_tag=LDO50_RS31955;partial=true;product=hypothetical protein;protein_id=WP_435520886.1;start_range=.,2026;transl_table=11 ##sequence-region NZ_CAJZAO010000310.1 1 1328 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000310.1 RefSeq region 1 1328 . + . ID=NZ_CAJZAO010000310.1:1..1328;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_378 NZ_CAJZAO010000310.1 RefSeq gene 1 434 . - . ID=gene-LDO50_RS20785;Name=LDO50_RS20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20785;partial=true;start_range=.,1 NZ_CAJZAO010000310.1 Protein Homology CDS 1 434 . - 0 ID=cds-WP_224020097.1;Parent=gene-LDO50_RS20785;Dbxref=GenBank:WP_224020097.1;Name=WP_224020097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755667.1;locus_tag=LDO50_RS20785;partial=true;product=SidA/IucD/PvdA family monooxygenase;protein_id=WP_224020097.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000310.1 RefSeq gene 624 1328 . - . ID=gene-LDO50_RS20790;Name=LDO50_RS20790;end_range=1328,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20790;old_locus_tag=BVI1335_3780003;partial=true NZ_CAJZAO010000310.1 Protein Homology CDS 624 1328 . - 0 ID=cds-WP_224020098.1;Parent=gene-LDO50_RS20790;Dbxref=GenBank:WP_224020098.1;Name=WP_224020098.1;Ontology_term=GO:0003824;end_range=1328,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213362.1;locus_tag=LDO50_RS20790;partial=true;product=condensation domain-containing protein;protein_id=WP_224020098.1;transl_table=11 ##sequence-region NZ_CAJZAO010000311.1 1 914 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000311.1 RefSeq region 1 914 . + . ID=NZ_CAJZAO010000311.1:1..914;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_379 NZ_CAJZAO010000311.1 RefSeq gene 1 319 . + . ID=gene-LDO50_RS20795;Name=LDO50_RS20795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20795;old_locus_tag=BVI1335_3790001;partial=true;start_range=.,1 NZ_CAJZAO010000311.1 Protein Homology CDS 1 319 . + 1 ID=cds-WP_224020099.1;Parent=gene-LDO50_RS20795;Dbxref=GenBank:WP_224020099.1;Name=WP_224020099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353392.1;locus_tag=LDO50_RS20795;partial=true;product=DUF6537 domain-containing protein;protein_id=WP_224020099.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000311.1 RefSeq pseudogene 410 759 . - . ID=gene-LDO50_RS20800;Name=LDO50_RS20800;end_range=759,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS20800;old_locus_tag=BVI1335_3790002;partial=true;pseudo=true NZ_CAJZAO010000311.1 Protein Homology CDS 410 759 . - 2 ID=cds-LDO50_RS20800;Parent=gene-LDO50_RS20800;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=759,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414312.1;locus_tag=LDO50_RS20800;partial=true;product=Na+/H+ antiporter;pseudo=true;transl_table=11 NZ_CAJZAO010000311.1 RefSeq pseudogene 770 914 . - . ID=gene-LDO50_RS31960;Name=LDO50_RS31960;end_range=914,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31960;partial=true;pseudo=true;start_range=.,770 NZ_CAJZAO010000311.1 Protein Homology CDS 770 914 . - 0 ID=cds-LDO50_RS31960;Parent=gene-LDO50_RS31960;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=914,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877168.1;locus_tag=LDO50_RS31960;partial=true;product=Na+/H+ antiporter;pseudo=true;start_range=.,770;transl_table=11 ##sequence-region NZ_CAJZAO010000312.1 1 30384 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000312.1 RefSeq region 1 30384 . + . ID=NZ_CAJZAO010000312.1:1..30384;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_38 NZ_CAJZAO010000312.1 RefSeq gene 1 265 . + . ID=gene-LDO50_RS20805;Name=LDO50_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20805;old_locus_tag=BVI1335_380001;partial=true;start_range=.,1 NZ_CAJZAO010000312.1 Protein Homology CDS 1 265 . + 1 ID=cds-WP_224020100.1;Parent=gene-LDO50_RS20805;Dbxref=GenBank:WP_224020100.1;Name=WP_224020100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661166.1;locus_tag=LDO50_RS20805;partial=true;product=hypothetical protein;protein_id=WP_224020100.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 292 1563 . + . ID=gene-LDO50_RS20810;Name=LDO50_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20810;old_locus_tag=BVI1335_380002 NZ_CAJZAO010000312.1 Protein Homology CDS 292 1563 . + 0 ID=cds-WP_011880527.1;Parent=gene-LDO50_RS20810;Dbxref=GenBank:WP_011880527.1;Name=WP_011880527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372339.1;locus_tag=LDO50_RS20810;product=TadE/TadG family type IV pilus assembly protein;protein_id=WP_011880527.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 1607 2110 . + . ID=gene-LDO50_RS20815;Name=LDO50_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20815;old_locus_tag=BVI1335_380004 NZ_CAJZAO010000312.1 Protein Homology CDS 1607 2110 . + 0 ID=cds-WP_175658136.1;Parent=gene-LDO50_RS20815;Dbxref=GenBank:WP_175658136.1;Name=WP_175658136.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602875.1;locus_tag=LDO50_RS20815;product=TadE/TadG family type IV pilus assembly protein;protein_id=WP_175658136.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 2107 2550 . + . ID=gene-LDO50_RS20820;Name=LDO50_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20820;old_locus_tag=BVI1335_380005 NZ_CAJZAO010000312.1 Protein Homology CDS 2107 2550 . + 0 ID=cds-WP_011880525.1;Parent=gene-LDO50_RS20820;Dbxref=GenBank:WP_011880525.1;Name=WP_011880525.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372341.1;locus_tag=LDO50_RS20820;product=TadE/TadG family type IV pilus assembly protein;protein_id=WP_011880525.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 2571 3779 . + . ID=gene-LDO50_RS20825;Name=LDO50_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20825;old_locus_tag=BVI1335_380006 NZ_CAJZAO010000312.1 Protein Homology CDS 2571 3779 . + 0 ID=cds-WP_011880524.1;Parent=gene-LDO50_RS20825;Dbxref=GenBank:WP_011880524.1;Name=WP_011880524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908183.1;locus_tag=LDO50_RS20825;product=AAA family ATPase;protein_id=WP_011880524.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 3799 5166 . + . ID=gene-LDO50_RS20830;Name=LDO50_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20830;old_locus_tag=BVI1335_380007 NZ_CAJZAO010000312.1 Protein Homology CDS 3799 5166 . + 0 ID=cds-WP_011880523.1;Parent=gene-LDO50_RS20830;Dbxref=GenBank:WP_011880523.1;Name=WP_011880523.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880523.1;locus_tag=LDO50_RS20830;product=CpaF family protein;protein_id=WP_011880523.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 5184 6161 . + . ID=gene-LDO50_RS20835;Name=LDO50_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20835;old_locus_tag=BVI1335_380008 NZ_CAJZAO010000312.1 Protein Homology CDS 5184 6161 . + 0 ID=cds-WP_011880522.1;Parent=gene-LDO50_RS20835;Dbxref=GenBank:WP_011880522.1;Name=WP_011880522.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004537325.1;locus_tag=LDO50_RS20835;product=type II secretion system F family protein;protein_id=WP_011880522.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 6200 7183 . + . ID=gene-LDO50_RS20840;Name=LDO50_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20840;old_locus_tag=BVI1335_380009 NZ_CAJZAO010000312.1 Protein Homology CDS 6200 7183 . + 0 ID=cds-WP_011880521.1;Parent=gene-LDO50_RS20840;Dbxref=GenBank:WP_011880521.1;Name=WP_011880521.1;Ontology_term=GO:0015628,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486292.1;locus_tag=LDO50_RS20840;product=type II secretion system F family protein;protein_id=WP_011880521.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 7495 8454 . - . ID=gene-LDO50_RS20845;Name=LDO50_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20845;old_locus_tag=BVI1335_380011 NZ_CAJZAO010000312.1 Protein Homology CDS 7495 8454 . - 0 ID=cds-WP_059580137.1;Parent=gene-LDO50_RS20845;Dbxref=GenBank:WP_059580137.1;Name=WP_059580137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880520.1;locus_tag=LDO50_RS20845;product=SphA family protein;protein_id=WP_059580137.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 8488 9018 . - . ID=gene-LDO50_RS20850;Name=LDO50_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20850;old_locus_tag=BVI1335_380012 NZ_CAJZAO010000312.1 Protein Homology CDS 8488 9018 . - 0 ID=cds-WP_059548593.1;Parent=gene-LDO50_RS20850;Dbxref=GenBank:WP_059548593.1;Name=WP_059548593.1;Ontology_term=GO:0010181,GO:0016491,GO:0016646;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on the CH-NH group of donors%2C NAD or NADP as acceptor|0016646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726171.1;locus_tag=LDO50_RS20850;product=flavin reductase family protein;protein_id=WP_059548593.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 9015 10262 . - . ID=gene-LDO50_RS20855;Name=LDO50_RS20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20855;old_locus_tag=BVI1335_380013 NZ_CAJZAO010000312.1 Protein Homology CDS 9015 10262 . - 0 ID=cds-WP_046425761.1;Parent=gene-LDO50_RS20855;Dbxref=GenBank:WP_046425761.1;Name=WP_046425761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880518.1;locus_tag=LDO50_RS20855;product=styrene monooxygenase/indole monooxygenase family protein;protein_id=WP_046425761.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 10326 11114 . - . ID=gene-LDO50_RS20860;Name=LDO50_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20860;old_locus_tag=BVI1335_380014 NZ_CAJZAO010000312.1 Protein Homology CDS 10326 11114 . - 0 ID=cds-WP_059579898.1;Parent=gene-LDO50_RS20860;Dbxref=GenBank:WP_059579898.1;Name=WP_059579898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549043.1;locus_tag=LDO50_RS20860;product=SDR family oxidoreductase;protein_id=WP_059579898.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 11179 12408 . - . ID=gene-LDO50_RS20865;Name=LDO50_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20865;old_locus_tag=BVI1335_380015 NZ_CAJZAO010000312.1 Protein Homology CDS 11179 12408 . - 0 ID=cds-WP_224020101.1;Parent=gene-LDO50_RS20865;Dbxref=GenBank:WP_224020101.1;Name=WP_224020101.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372353.1;locus_tag=LDO50_RS20865;product=dienelactone hydrolase family protein;protein_id=WP_224020101.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 12762 13787 . + . ID=gene-LDO50_RS20870;Name=LDO50_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20870;old_locus_tag=BVI1335_380016 NZ_CAJZAO010000312.1 Protein Homology CDS 12762 13787 . + 0 ID=cds-WP_059456717.1;Parent=gene-LDO50_RS20870;Dbxref=GenBank:WP_059456717.1;Name=WP_059456717.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726166.1;locus_tag=LDO50_RS20870;product=AraC family transcriptional regulator;protein_id=WP_059456717.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 13959 15152 . + . ID=gene-LDO50_RS20875;Name=LDO50_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20875;old_locus_tag=BVI1335_380017 NZ_CAJZAO010000312.1 Protein Homology CDS 13959 15152 . + 0 ID=cds-WP_059456716.1;Parent=gene-LDO50_RS20875;Dbxref=GenBank:WP_059456716.1;Name=WP_059456716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726165.1;locus_tag=LDO50_RS20875;product=NnrS family protein;protein_id=WP_059456716.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 15332 16441 . - . ID=gene-LDO50_RS20880;Name=LDO50_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20880;old_locus_tag=BVI1335_380018 NZ_CAJZAO010000312.1 Protein Homology CDS 15332 16441 . - 0 ID=cds-WP_034193640.1;Parent=gene-LDO50_RS20880;Dbxref=GenBank:WP_034193640.1;Name=WP_034193640.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753041.1;locus_tag=LDO50_RS20880;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_034193640.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 16497 16772 . - . ID=gene-LDO50_RS20885;Name=frmR;gbkey=Gene;gene=frmR;gene_biotype=protein_coding;locus_tag=LDO50_RS20885;old_locus_tag=BVI1335_380019 NZ_CAJZAO010000312.1 Protein Homology CDS 16497 16772 . - 0 ID=cds-WP_011880512.1;Parent=gene-LDO50_RS20885;Dbxref=GenBank:WP_011880512.1;Name=WP_011880512.1;gbkey=CDS;gene=frmR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880512.1;locus_tag=LDO50_RS20885;product=formaldehyde-responsive transcriptional repressor FrmR;protein_id=WP_011880512.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 17131 17850 . + . ID=gene-LDO50_RS20890;Name=LDO50_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20890;old_locus_tag=BVI1335_380020 NZ_CAJZAO010000312.1 Protein Homology CDS 17131 17850 . + 0 ID=cds-WP_050991260.1;Parent=gene-LDO50_RS20890;Dbxref=GenBank:WP_050991260.1;Name=WP_050991260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880511.1;locus_tag=LDO50_RS20890;product=autoinducer binding domain-containing protein;protein_id=WP_050991260.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 18501 18875 . + . ID=gene-LDO50_RS20895;Name=LDO50_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20895;old_locus_tag=BVI1335_380022 NZ_CAJZAO010000312.1 Protein Homology CDS 18501 18875 . + 0 ID=cds-WP_011880510.1;Parent=gene-LDO50_RS20895;Dbxref=GenBank:WP_011880510.1;Name=WP_011880510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880510.1;locus_tag=LDO50_RS20895;product=nuclear transport factor 2 family protein;protein_id=WP_011880510.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 18990 20540 . + . ID=gene-LDO50_RS20900;Name=LDO50_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20900;old_locus_tag=BVI1335_380023 NZ_CAJZAO010000312.1 Protein Homology CDS 18990 20540 . + 0 ID=cds-WP_011880509.1;Parent=gene-LDO50_RS20900;Dbxref=GenBank:WP_011880509.1;Name=WP_011880509.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880509.1;locus_tag=LDO50_RS20900;product=MFS transporter;protein_id=WP_011880509.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 20754 21842 . - . ID=gene-LDO50_RS20905;Name=LDO50_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20905;old_locus_tag=BVI1335_380025 NZ_CAJZAO010000312.1 Protein Homology CDS 20754 21842 . - 0 ID=cds-WP_224020102.1;Parent=gene-LDO50_RS20905;Dbxref=GenBank:WP_224020102.1;Name=WP_224020102.1;Ontology_term=GO:0005975,GO:0016857,GO:0030246;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726161.1;locus_tag=LDO50_RS20905;product=aldose epimerase family protein;protein_id=WP_224020102.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 21868 23061 . - . ID=gene-LDO50_RS20910;Name=LDO50_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20910;old_locus_tag=BVI1335_380026 NZ_CAJZAO010000312.1 Protein Homology CDS 21868 23061 . - 0 ID=cds-WP_011880507.1;Parent=gene-LDO50_RS20910;Dbxref=GenBank:WP_011880507.1;Name=WP_011880507.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403516.1;locus_tag=LDO50_RS20910;product=XylR family transcriptional regulator;protein_id=WP_011880507.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 23325 24647 . + . ID=gene-LDO50_RS20915;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=LDO50_RS20915;old_locus_tag=BVI1335_380027 NZ_CAJZAO010000312.1 Protein Homology CDS 23325 24647 . + 0 ID=cds-WP_059456709.1;Parent=gene-LDO50_RS20915;Dbxref=GenBank:WP_059456709.1;Name=WP_059456709.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880506.1;locus_tag=LDO50_RS20915;product=xylose isomerase;protein_id=WP_059456709.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 24652 26130 . + . ID=gene-LDO50_RS20920;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=LDO50_RS20920;old_locus_tag=BVI1335_380028 NZ_CAJZAO010000312.1 Protein Homology CDS 24652 26130 . + 0 ID=cds-WP_059456708.1;Parent=gene-LDO50_RS20920;Dbxref=GenBank:WP_059456708.1;Name=WP_059456708.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397034.1;locus_tag=LDO50_RS20920;product=xylulokinase;protein_id=WP_059456708.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 26217 27245 . + . ID=gene-LDO50_RS20925;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=LDO50_RS20925;old_locus_tag=BVI1335_380029 NZ_CAJZAO010000312.1 Protein Homology CDS 26217 27245 . + 0 ID=cds-WP_011880504.1;Parent=gene-LDO50_RS20925;Dbxref=GenBank:WP_011880504.1;Name=WP_011880504.1;Ontology_term=GO:0015753,GO:0015614,GO:0033222,GO:0055052;gbkey=CDS;gene=xylF;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type D-xylose transporter activity|0015614||IEA,xylose binding|0033222||IEA;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011490741.1;locus_tag=LDO50_RS20925;product=D-xylose ABC transporter substrate-binding protein;protein_id=WP_011880504.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 27317 28876 . + . ID=gene-LDO50_RS20930;Name=xylG;gbkey=Gene;gene=xylG;gene_biotype=protein_coding;locus_tag=LDO50_RS20930;old_locus_tag=BVI1335_380030 NZ_CAJZAO010000312.1 Protein Homology CDS 27317 28876 . + 0 ID=cds-WP_059579908.1;Parent=gene-LDO50_RS20930;Dbxref=GenBank:WP_059579908.1;Name=WP_059579908.1;Ontology_term=GO:0015753,GO:0005524,GO:0015614,GO:0016020;gbkey=CDS;gene=xylG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-xylose transporter activity|0015614||IEA;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335463.1;locus_tag=LDO50_RS20930;product=D-xylose ABC transporter ATP-binding protein;protein_id=WP_059579908.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq gene 28873 29931 . + . ID=gene-LDO50_RS20935;Name=LDO50_RS20935;end_range=29931,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20935;partial=true NZ_CAJZAO010000312.1 Protein Homology CDS 28873 29931 . + 0 ID=cds-WP_443797852.1;Parent=gene-LDO50_RS20935;Dbxref=GenBank:WP_443797852.1;Name=WP_443797852.1;Ontology_term=GO:0008643,GO:0042626,GO:0140359,GO:0016020,GO:0043190;end_range=29931,.;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757042.1;locus_tag=LDO50_RS20935;partial=true;product=sugar ABC transporter permease;protein_id=WP_443797852.1;transl_table=11 NZ_CAJZAO010000312.1 RefSeq pseudogene 29942 30088 . + . ID=gene-LDO50_RS31965;Name=LDO50_RS31965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31965;old_locus_tag=BVI1335_380032;partial=true;pseudo=true;start_range=.,29942 NZ_CAJZAO010000312.1 Protein Homology CDS 29942 30088 . + 0 ID=cds-LDO50_RS31965;Parent=gene-LDO50_RS31965;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006047720.1;locus_tag=LDO50_RS31965;partial=true;product=sugar ABC transporter permease;pseudo=true;start_range=.,29942;transl_table=11 ##sequence-region NZ_CAJZAO010000313.1 1 618 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000313.1 RefSeq region 1 618 . + . ID=NZ_CAJZAO010000313.1:1..618;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_380 NZ_CAJZAO010000313.1 RefSeq gene 1 403 . - . ID=gene-LDO50_RS20945;Name=LDO50_RS20945;end_range=403,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20945;partial=true;start_range=.,1 NZ_CAJZAO010000313.1 Protein Homology CDS 1 403 . - 1 ID=cds-WP_443797853.1;Parent=gene-LDO50_RS20945;Dbxref=GenBank:WP_443797853.1;Name=WP_443797853.1;Ontology_term=GO:0055085,GO:0015562;end_range=403,.;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218241.1;locus_tag=LDO50_RS20945;partial=true;product=TolC family protein;protein_id=WP_443797853.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000313.1 RefSeq pseudogene 414 618 . - . ID=gene-LDO50_RS31970;Name=LDO50_RS31970;end_range=618,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31970;partial=true;pseudo=true;start_range=.,414 NZ_CAJZAO010000313.1 Protein Homology CDS 414 618 . - 1 ID=cds-LDO50_RS31970;Parent=gene-LDO50_RS31970;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=618,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726017.1;locus_tag=LDO50_RS31970;partial=true;product=efflux transporter outer membrane subunit;pseudo=true;start_range=.,414;transl_table=11 ##sequence-region NZ_CAJZAO010000314.1 1 1109 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000314.1 RefSeq region 1 1109 . + . ID=NZ_CAJZAO010000314.1:1..1109;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_381 NZ_CAJZAO010000314.1 RefSeq gene 150 423 . + . ID=gene-LDO50_RS31140;Name=LDO50_RS31140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31140;old_locus_tag=BVI1335_3810001;partial=true;start_range=.,150 NZ_CAJZAO010000314.1 Protein Homology CDS 150 423 . + 1 ID=cds-WP_372586116.1;Parent=gene-LDO50_RS31140;Dbxref=GenBank:WP_372586116.1;Name=WP_372586116.1;Ontology_term=GO:0009055,GO:0051537;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486151.1;locus_tag=LDO50_RS31140;partial=true;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_372586116.1;start_range=.,150;transl_table=11 NZ_CAJZAO010000314.1 RefSeq gene 556 759 . + . ID=gene-LDO50_RS20955;Name=LDO50_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20955;old_locus_tag=BVI1335_3810002 NZ_CAJZAO010000314.1 Protein Homology CDS 556 759 . + 0 ID=cds-WP_011881436.1;Parent=gene-LDO50_RS20955;Dbxref=GenBank:WP_011881436.1;Name=WP_011881436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900233.1;locus_tag=LDO50_RS20955;product=DUF2970 domain-containing protein;protein_id=WP_011881436.1;transl_table=11 ##sequence-region NZ_CAJZAO010000315.1 1 22542 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000315.1 RefSeq region 1 22542 . + . ID=NZ_CAJZAO010000315.1:1..22542;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_39 NZ_CAJZAO010000315.1 RefSeq gene 411 1376 . - . ID=gene-LDO50_RS20965;Name=LDO50_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20965;old_locus_tag=BVI1335_390002 NZ_CAJZAO010000315.1 Protein Homology CDS 411 1376 . - 0 ID=cds-WP_034195528.1;Parent=gene-LDO50_RS20965;Dbxref=GenBank:WP_034195528.1;Name=WP_034195528.1;Ontology_term=GO:0010181,GO:0016491,GO:0046872,GO:0051537;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495155.1;locus_tag=LDO50_RS20965;product=PDR/VanB family oxidoreductase;protein_id=WP_034195528.1;transl_table=11 NZ_CAJZAO010000315.1 RefSeq gene 1373 2452 . - . ID=gene-LDO50_RS20970;Name=LDO50_RS20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20970;old_locus_tag=BVI1335_390004 NZ_CAJZAO010000315.1 Protein Homology CDS 1373 2452 . - 0 ID=cds-WP_224020104.1;Parent=gene-LDO50_RS20970;Dbxref=GenBank:WP_224020104.1;Name=WP_224020104.1;Ontology_term=GO:0016491,GO:0051537;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480544.1;locus_tag=LDO50_RS20970;product=aromatic ring-hydroxylating dioxygenase subunit alpha;protein_id=WP_224020104.1;transl_table=11 NZ_CAJZAO010000315.1 RefSeq gene 2511 2636 . + . ID=gene-LDO50_RS30880;Name=LDO50_RS30880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30880 NZ_CAJZAO010000315.1 GeneMarkS-2+ CDS 2511 2636 . + 0 ID=cds-WP_264167233.1;Parent=gene-LDO50_RS30880;Dbxref=GenBank:WP_264167233.1;Name=WP_264167233.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS30880;product=hypothetical protein;protein_id=WP_264167233.1;transl_table=11 NZ_CAJZAO010000315.1 RefSeq gene 2648 3136 . + . ID=gene-LDO50_RS20975;Name=LDO50_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20975;old_locus_tag=BVI1335_390003 NZ_CAJZAO010000315.1 Protein Homology CDS 2648 3136 . + 0 ID=cds-WP_011880848.1;Parent=gene-LDO50_RS20975;Dbxref=GenBank:WP_011880848.1;Name=WP_011880848.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339432.1;locus_tag=LDO50_RS20975;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_011880848.1;transl_table=11 NZ_CAJZAO010000315.1 RefSeq gene 3207 3953 . - . ID=gene-LDO50_RS20980;Name=LDO50_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20980;old_locus_tag=BVI1335_390005 NZ_CAJZAO010000315.1 Protein Homology CDS 3207 3953 . - 0 ID=cds-WP_011880847.1;Parent=gene-LDO50_RS20980;Dbxref=GenBank:WP_011880847.1;Name=WP_011880847.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880847.1;locus_tag=LDO50_RS20980;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011880847.1;transl_table=11 NZ_CAJZAO010000315.1 RefSeq gene 4124 5305 . + . ID=gene-LDO50_RS20985;Name=LDO50_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20985;old_locus_tag=BVI1335_390006 NZ_CAJZAO010000315.1 Protein Homology CDS 4124 5305 . + 0 ID=cds-WP_059568027.1;Parent=gene-LDO50_RS20985;Dbxref=GenBank:WP_059568027.1;Name=WP_059568027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724024.1;locus_tag=LDO50_RS20985;product=isovaleryl-CoA dehydrogenase;protein_id=WP_059568027.1;transl_table=11 NZ_CAJZAO010000315.1 RefSeq gene 5337 6944 . + . ID=gene-LDO50_RS20990;Name=LDO50_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20990;old_locus_tag=BVI1335_390007 NZ_CAJZAO010000315.1 Protein Homology CDS 5337 6944 . + 0 ID=cds-WP_014724023.1;Parent=gene-LDO50_RS20990;Dbxref=GenBank:WP_014724023.1;Name=WP_014724023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690312.1;locus_tag=LDO50_RS20990;product=carboxyl transferase domain-containing protein;protein_id=WP_014724023.1;transl_table=11 NZ_CAJZAO010000315.1 RefSeq gene 6964 7749 . + . ID=gene-LDO50_RS20995;Name=LDO50_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS20995;old_locus_tag=BVI1335_390008 NZ_CAJZAO010000315.1 Protein Homology CDS 6964 7749 . + 0 ID=cds-WP_046427440.1;Parent=gene-LDO50_RS20995;Dbxref=GenBank:WP_046427440.1;Name=WP_046427440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366812.1;locus_tag=LDO50_RS20995;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_046427440.1;transl_table=11 NZ_CAJZAO010000315.1 RefSeq gene 7786 9786 . + . ID=gene-LDO50_RS21000;Name=LDO50_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21000;old_locus_tag=BVI1335_390009 NZ_CAJZAO010000315.1 Protein Homology CDS 7786 9786 . + 0 ID=cds-WP_224020105.1;Parent=gene-LDO50_RS21000;Dbxref=GenBank:WP_224020105.1;Name=WP_224020105.1;Ontology_term=GO:0004075,GO:0005524,GO:0016421,GO:0046872;gbkey=CDS;go_function=biotin carboxylase activity|0004075||IEA,ATP binding|0005524||IEA,CoA carboxylase activity|0016421||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480550.1;locus_tag=LDO50_RS21000;product=acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha;protein_id=WP_224020105.1;transl_table=11 NZ_CAJZAO010000315.1 RefSeq gene 10057 11199 . + . ID=gene-LDO50_RS21005;Name=LDO50_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21005;old_locus_tag=BVI1335_390010 NZ_CAJZAO010000315.1 Protein Homology CDS 10057 11199 . + 0 ID=cds-WP_011880842.1;Parent=gene-LDO50_RS21005;Dbxref=GenBank:WP_011880842.1;Name=WP_011880842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480553.1;locus_tag=LDO50_RS21005;product=DUF2827 domain-containing protein;protein_id=WP_011880842.1;transl_table=11 NZ_CAJZAO010000315.1 RefSeq gene 11941 12744 . + . ID=gene-LDO50_RS21010;Name=LDO50_RS21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21010;old_locus_tag=BVI1335_390012 NZ_CAJZAO010000315.1 Protein Homology CDS 11941 12744 . + 0 ID=cds-WP_011880841.1;Parent=gene-LDO50_RS21010;Dbxref=GenBank:WP_011880841.1;Name=WP_011880841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366806.1;locus_tag=LDO50_RS21010;product=EAL domain-containing protein;protein_id=WP_011880841.1;transl_table=11 NZ_CAJZAO010000315.1 RefSeq gene 12806 13237 . + . ID=gene-LDO50_RS21015;Name=LDO50_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21015;old_locus_tag=BVI1335_390013 NZ_CAJZAO010000315.1 Protein Homology CDS 12806 13237 . + 0 ID=cds-WP_224020106.1;Parent=gene-LDO50_RS21015;Dbxref=GenBank:WP_224020106.1;Name=WP_224020106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880840.1;locus_tag=LDO50_RS21015;product=hypothetical protein;protein_id=WP_224020106.1;transl_table=11 NZ_CAJZAO010000315.1 RefSeq gene 13284 15248 . - . ID=gene-LDO50_RS21020;Name=LDO50_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21020;old_locus_tag=BVI1335_390014 NZ_CAJZAO010000315.1 Protein Homology CDS 13284 15248 . - 0 ID=cds-WP_175994778.1;Parent=gene-LDO50_RS21020;Dbxref=GenBank:WP_175994778.1;Name=WP_175994778.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724018.1;locus_tag=LDO50_RS21020;product=FkbM family methyltransferase;protein_id=WP_175994778.1;transl_table=11 NZ_CAJZAO010000315.1 RefSeq gene 15283 16419 . - . ID=gene-LDO50_RS21025;Name=LDO50_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21025;old_locus_tag=BVI1335_390015 NZ_CAJZAO010000315.1 Protein Homology CDS 15283 16419 . - 0 ID=cds-WP_011880838.1;Parent=gene-LDO50_RS21025;Dbxref=GenBank:WP_011880838.1;Name=WP_011880838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331303.1;locus_tag=LDO50_RS21025;product=DUF2827 family protein;protein_id=WP_011880838.1;transl_table=11 NZ_CAJZAO010000315.1 RefSeq gene 16441 16908 . - . ID=gene-LDO50_RS21030;Name=LDO50_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21030;old_locus_tag=BVI1335_390016 NZ_CAJZAO010000315.1 Protein Homology CDS 16441 16908 . - 0 ID=cds-WP_011880837.1;Parent=gene-LDO50_RS21030;Dbxref=GenBank:WP_011880837.1;Name=WP_011880837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366804.1;locus_tag=LDO50_RS21030;product=DUF4019 domain-containing protein;protein_id=WP_011880837.1;transl_table=11 NZ_CAJZAO010000315.1 RefSeq gene 16934 18088 . - . ID=gene-LDO50_RS21035;Name=LDO50_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21035;old_locus_tag=BVI1335_390017 NZ_CAJZAO010000315.1 Protein Homology CDS 16934 18088 . - 0 ID=cds-WP_034195520.1;Parent=gene-LDO50_RS21035;Dbxref=GenBank:WP_034195520.1;Name=WP_034195520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898439.1;locus_tag=LDO50_RS21035;product=DUF2827 domain-containing protein;protein_id=WP_034195520.1;transl_table=11 NZ_CAJZAO010000315.1 RefSeq gene 18103 19248 . - . ID=gene-LDO50_RS21040;Name=LDO50_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21040;old_locus_tag=BVI1335_390018 NZ_CAJZAO010000315.1 Protein Homology CDS 18103 19248 . - 0 ID=cds-WP_175658468.1;Parent=gene-LDO50_RS21040;Dbxref=GenBank:WP_175658468.1;Name=WP_175658468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354052.1;locus_tag=LDO50_RS21040;product=DUF2827 domain-containing protein;protein_id=WP_175658468.1;transl_table=11 NZ_CAJZAO010000315.1 RefSeq gene 19593 20273 . - . ID=gene-LDO50_RS21045;Name=LDO50_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21045;old_locus_tag=BVI1335_390019 NZ_CAJZAO010000315.1 Protein Homology CDS 19593 20273 . - 0 ID=cds-WP_069224730.1;Parent=gene-LDO50_RS21045;Dbxref=GenBank:WP_069224730.1;Name=WP_069224730.1;Ontology_term=GO:0015288,GO:0042834,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405964.1;locus_tag=LDO50_RS21045;product=OmpA family protein;protein_id=WP_069224730.1;transl_table=11 NZ_CAJZAO010000315.1 RefSeq gene 20368 22542 . - . ID=gene-LDO50_RS21050;Name=LDO50_RS21050;end_range=22542,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21050;old_locus_tag=BVI1335_390020;partial=true NZ_CAJZAO010000315.1 Protein Homology CDS 20368 22542 . - 0 ID=cds-WP_224020107.1;Parent=gene-LDO50_RS21050;Dbxref=GenBank:WP_224020107.1;Name=WP_224020107.1;Ontology_term=GO:0007155,GO:0015031;end_range=22542,.;gbkey=CDS;go_process=cell adhesion|0007155||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659538.1;locus_tag=LDO50_RS21050;partial=true;product=YadA family autotransporter adhesin;protein_id=WP_224020107.1;transl_table=11 ##sequence-region NZ_CAJZAO010000316.1 1 38463 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000316.1 RefSeq region 1 38463 . + . ID=NZ_CAJZAO010000316.1:1..38463;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_4 NZ_CAJZAO010000316.1 RefSeq gene 1 147 . - . ID=gene-LDO50_RS21055;Name=LDO50_RS21055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21055;partial=true;start_range=.,1 NZ_CAJZAO010000316.1 Protein Homology CDS 1 147 . - 0 ID=cds-WP_224020112.1;Parent=gene-LDO50_RS21055;Dbxref=GenBank:WP_224020112.1;Name=WP_224020112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006394528.1;locus_tag=LDO50_RS21055;partial=true;product=DUF523 domain-containing protein;protein_id=WP_224020112.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 504 1853 . + . ID=gene-LDO50_RS21060;Name=LDO50_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21060;old_locus_tag=BVI1335_40003;partial=true;start_range=.,504 NZ_CAJZAO010000316.1 Protein Homology CDS 504 1853 . + 0 ID=cds-WP_224020113.1;Parent=gene-LDO50_RS21060;Dbxref=GenBank:WP_224020113.1;Name=WP_224020113.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659670.1;locus_tag=LDO50_RS21060;partial=true;product=methyl-accepting chemotaxis protein;protein_id=WP_224020113.1;start_range=.,504;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 2253 3797 . + . ID=gene-LDO50_RS21065;Name=LDO50_RS21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21065;old_locus_tag=BVI1335_40004 NZ_CAJZAO010000316.1 Protein Homology CDS 2253 3797 . + 0 ID=cds-WP_045578381.1;Parent=gene-LDO50_RS21065;Dbxref=GenBank:WP_045578381.1;Name=WP_045578381.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659670.1;locus_tag=LDO50_RS21065;product=methyl-accepting chemotaxis protein;protein_id=WP_045578381.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 3921 5384 . - . ID=gene-LDO50_RS21070;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=LDO50_RS21070;old_locus_tag=BVI1335_40005 NZ_CAJZAO010000316.1 Protein Homology CDS 3921 5384 . - 0 ID=cds-WP_011880938.1;Parent=gene-LDO50_RS21070;Dbxref=GenBank:WP_011880938.1;Name=WP_011880938.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331162.1;locus_tag=LDO50_RS21070;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_011880938.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 5462 6745 . - . ID=gene-LDO50_RS21075;Name=LDO50_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21075;old_locus_tag=BVI1335_40006 NZ_CAJZAO010000316.1 Protein Homology CDS 5462 6745 . - 0 ID=cds-WP_011880937.1;Parent=gene-LDO50_RS21075;Dbxref=GenBank:WP_011880937.1;Name=WP_011880937.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603826.1;locus_tag=LDO50_RS21075;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_011880937.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 6872 8380 . + . ID=gene-LDO50_RS21080;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=LDO50_RS21080;old_locus_tag=BVI1335_40007 NZ_CAJZAO010000316.1 Protein Homology CDS 6872 8380 . + 0 ID=cds-WP_011880936.1;Parent=gene-LDO50_RS21080;Dbxref=GenBank:WP_011880936.1;Name=WP_011880936.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724093.1;locus_tag=LDO50_RS21080;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_011880936.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 8688 9752 . + . ID=gene-LDO50_RS21085;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=LDO50_RS21085;old_locus_tag=BVI1335_40008 NZ_CAJZAO010000316.1 Protein Homology CDS 8688 9752 . + 0 ID=cds-WP_034193359.1;Parent=gene-LDO50_RS21085;Dbxref=GenBank:WP_034193359.1;Name=WP_034193359.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900987.1;locus_tag=LDO50_RS21085;product=selenide%2C water dikinase SelD;protein_id=WP_034193359.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 9928 10518 . + . ID=gene-LDO50_RS21090;Name=LDO50_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21090;old_locus_tag=BVI1335_40009 NZ_CAJZAO010000316.1 Protein Homology CDS 9928 10518 . + 0 ID=cds-WP_224020108.1;Parent=gene-LDO50_RS21090;Dbxref=GenBank:WP_224020108.1;Name=WP_224020108.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406835.1;locus_tag=LDO50_RS21090;product=LysE family translocator;protein_id=WP_224020108.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 10850 11947 . + . ID=gene-LDO50_RS21095;Name=LDO50_RS21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21095;old_locus_tag=BVI1335_40010 NZ_CAJZAO010000316.1 Protein Homology CDS 10850 11947 . + 0 ID=cds-WP_034193357.1;Parent=gene-LDO50_RS21095;Dbxref=GenBank:WP_034193357.1;Name=WP_034193357.1;Ontology_term=GO:0006139,GO:0001882,GO:0002060,GO:0004731,GO:0042301,GO:0042802,GO:0047975;gbkey=CDS;go_function=nucleoside binding|0001882||IEA,purine nucleobase binding|0002060||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,phosphate ion binding|0042301||IEA,identical protein binding|0042802||IEA,guanosine phosphorylase activity|0047975||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188476.1;locus_tag=LDO50_RS21095;product=purine-nucleoside phosphorylase;protein_id=WP_034193357.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 12154 12447 . - . ID=gene-LDO50_RS21100;Name=LDO50_RS21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21100;old_locus_tag=BVI1335_40011 NZ_CAJZAO010000316.1 Protein Homology CDS 12154 12447 . - 0 ID=cds-WP_011880932.1;Parent=gene-LDO50_RS21100;Dbxref=GenBank:WP_011880932.1;Name=WP_011880932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188266.1;locus_tag=LDO50_RS21100;product=DUF4148 domain-containing protein;protein_id=WP_011880932.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 12924 13928 . - . ID=gene-LDO50_RS21105;Name=ceoR;gbkey=Gene;gene=ceoR;gene_biotype=protein_coding;locus_tag=LDO50_RS21105;old_locus_tag=BVI1335_40013 NZ_CAJZAO010000316.1 Protein Homology CDS 12924 13928 . - 0 ID=cds-WP_011880930.1;Parent=gene-LDO50_RS21105;Dbxref=GenBank:WP_011880930.1;Name=WP_011880930.1;gbkey=CDS;gene=ceoR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484497.1;locus_tag=LDO50_RS21105;product=putative multidrug efflux transcriptional regulator CeoR;protein_id=WP_011880930.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 14102 14962 . + . ID=gene-LDO50_RS21110;Name=LDO50_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21110;old_locus_tag=BVI1335_40014 NZ_CAJZAO010000316.1 Protein Homology CDS 14102 14962 . + 0 ID=cds-WP_011880929.1;Parent=gene-LDO50_RS21110;Dbxref=GenBank:WP_011880929.1;Name=WP_011880929.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659656.1;locus_tag=LDO50_RS21110;product=alpha/beta hydrolase;protein_id=WP_011880929.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 14994 16211 . + . ID=gene-LDO50_RS21115;Name=ceoA;gbkey=Gene;gene=ceoA;gene_biotype=protein_coding;locus_tag=LDO50_RS21115;old_locus_tag=BVI1335_40015 NZ_CAJZAO010000316.1 Protein Homology CDS 14994 16211 . + 0 ID=cds-WP_011880928.1;Parent=gene-LDO50_RS21115;Dbxref=GenBank:WP_011880928.1;Name=WP_011880928.1;gbkey=CDS;gene=ceoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484484.1;locus_tag=LDO50_RS21115;product=multidrug efflux RND transporter periplasmic adaptor subunit CeoA;protein_id=WP_011880928.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 16258 19458 . + . ID=gene-LDO50_RS21120;Name=ceoB;gbkey=Gene;gene=ceoB;gene_biotype=protein_coding;locus_tag=LDO50_RS21120;old_locus_tag=BVI1335_40016 NZ_CAJZAO010000316.1 Protein Homology CDS 16258 19458 . + 0 ID=cds-WP_011880927.1;Parent=gene-LDO50_RS21120;Dbxref=GenBank:WP_011880927.1;Name=WP_011880927.1;gbkey=CDS;gene=ceoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_059641583.1;locus_tag=LDO50_RS21120;product=multidrug efflux RND transporter permease subunit CeoB;protein_id=WP_011880927.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 19469 21004 . + . ID=gene-LDO50_RS21125;Name=opcM;gbkey=Gene;gene=opcM;gene_biotype=protein_coding;locus_tag=LDO50_RS21125;old_locus_tag=BVI1335_40017 NZ_CAJZAO010000316.1 Protein Homology CDS 19469 21004 . + 0 ID=cds-WP_034193355.1;Parent=gene-LDO50_RS21125;Dbxref=GenBank:WP_034193355.1;Name=WP_034193355.1;gbkey=CDS;gene=opcM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484479.1;locus_tag=LDO50_RS21125;product=multidrug efflux transporter outer membrane subunit OpcM;protein_id=WP_034193355.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 21477 21818 . + . ID=gene-LDO50_RS21130;Name=LDO50_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21130;old_locus_tag=BVI1335_40018 NZ_CAJZAO010000316.1 Protein Homology CDS 21477 21818 . + 0 ID=cds-WP_224020109.1;Parent=gene-LDO50_RS21130;Dbxref=GenBank:WP_224020109.1;Name=WP_224020109.1;Ontology_term=GO:0019836;gbkey=CDS;go_process=symbiont-mediated hemolysis of host erythrocyte|0019836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876201.1;locus_tag=LDO50_RS21130;product=aegerolysin family protein;protein_id=WP_224020109.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 22611 23462 . - . ID=gene-LDO50_RS21135;Name=LDO50_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21135;old_locus_tag=BVI1335_40019 NZ_CAJZAO010000316.1 Protein Homology CDS 22611 23462 . - 0 ID=cds-WP_014724087.1;Parent=gene-LDO50_RS21135;Dbxref=GenBank:WP_014724087.1;Name=WP_014724087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366906.1;locus_tag=LDO50_RS21135;product=alpha/beta fold hydrolase;protein_id=WP_014724087.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 23726 23947 . - . ID=gene-LDO50_RS21140;Name=LDO50_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21140;old_locus_tag=BVI1335_40020 NZ_CAJZAO010000316.1 Protein Homology CDS 23726 23947 . - 0 ID=cds-WP_011880922.1;Parent=gene-LDO50_RS21140;Dbxref=GenBank:WP_011880922.1;Name=WP_011880922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724086.1;locus_tag=LDO50_RS21140;product=DUF3579 domain-containing protein;protein_id=WP_011880922.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 23964 25325 . - . ID=gene-LDO50_RS21145;Name=LDO50_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21145;old_locus_tag=BVI1335_40021 NZ_CAJZAO010000316.1 Protein Homology CDS 23964 25325 . - 0 ID=cds-WP_069246411.1;Parent=gene-LDO50_RS21145;Dbxref=GenBank:WP_069246411.1;Name=WP_069246411.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677,GO:0005524;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339347.1;locus_tag=LDO50_RS21145;product=sigma-54-dependent transcriptional regulator;protein_id=WP_069246411.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 25315 27201 . - . ID=gene-LDO50_RS21150;Name=LDO50_RS21150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21150;old_locus_tag=BVI1335_40022 NZ_CAJZAO010000316.1 Protein Homology CDS 25315 27201 . - 0 ID=cds-WP_069246412.1;Parent=gene-LDO50_RS21150;Dbxref=GenBank:WP_069246412.1;Name=WP_069246412.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724084.1;locus_tag=LDO50_RS21150;product=sensor histidine kinase;protein_id=WP_069246412.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 27387 28751 . - . ID=gene-LDO50_RS21155;Name=LDO50_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21155;old_locus_tag=BVI1335_40023 NZ_CAJZAO010000316.1 Protein Homology CDS 27387 28751 . - 0 ID=cds-WP_224020111.1;Parent=gene-LDO50_RS21155;Dbxref=GenBank:WP_224020111.1;Name=WP_224020111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014901002.1;locus_tag=LDO50_RS21155;product=2-hydroxycarboxylate transporter family protein;protein_id=WP_224020111.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 29183 30013 . + . ID=gene-LDO50_RS21160;Name=LDO50_RS21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21160;old_locus_tag=BVI1335_40024 NZ_CAJZAO010000316.1 Protein Homology CDS 29183 30013 . + 0 ID=cds-WP_059475135.1;Parent=gene-LDO50_RS21160;Dbxref=GenBank:WP_059475135.1;Name=WP_059475135.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216354.1;locus_tag=LDO50_RS21160;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_059475135.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 30024 31433 . + . ID=gene-LDO50_RS21165;Name=LDO50_RS21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21165;old_locus_tag=BVI1335_40025 NZ_CAJZAO010000316.1 Protein Homology CDS 30024 31433 . + 0 ID=cds-WP_059453917.1;Parent=gene-LDO50_RS21165;Dbxref=GenBank:WP_059453917.1;Name=WP_059453917.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724080.1;locus_tag=LDO50_RS21165;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_059453917.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 31452 32630 . + . ID=gene-LDO50_RS21170;Name=LDO50_RS21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21170;old_locus_tag=BVI1335_40026 NZ_CAJZAO010000316.1 Protein Homology CDS 31452 32630 . + 0 ID=cds-WP_060121279.1;Parent=gene-LDO50_RS21170;Dbxref=GenBank:WP_060121279.1;Name=WP_060121279.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216356.1;locus_tag=LDO50_RS21170;product=methionine ABC transporter ATP-binding protein;protein_id=WP_060121279.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 32623 33279 . + . ID=gene-LDO50_RS21175;Name=LDO50_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21175;old_locus_tag=BVI1335_40027 NZ_CAJZAO010000316.1 Protein Homology CDS 32623 33279 . + 0 ID=cds-WP_011880915.1;Parent=gene-LDO50_RS21175;Dbxref=GenBank:WP_011880915.1;Name=WP_011880915.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491339.1;locus_tag=LDO50_RS21175;product=methionine ABC transporter permease;protein_id=WP_011880915.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 33334 34191 . + . ID=gene-LDO50_RS21180;Name=LDO50_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21180;old_locus_tag=BVI1335_40028 NZ_CAJZAO010000316.1 Protein Homology CDS 33334 34191 . + 0 ID=cds-WP_011880914.1;Parent=gene-LDO50_RS21180;Dbxref=GenBank:WP_011880914.1;Name=WP_011880914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366896.1;locus_tag=LDO50_RS21180;product=hypothetical protein;protein_id=WP_011880914.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 34188 35399 . + . ID=gene-LDO50_RS21185;Name=LDO50_RS21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21185;old_locus_tag=BVI1335_40029 NZ_CAJZAO010000316.1 Protein Homology CDS 34188 35399 . + 0 ID=cds-WP_045577668.1;Parent=gene-LDO50_RS21185;Dbxref=GenBank:WP_045577668.1;Name=WP_045577668.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014901008.1;locus_tag=LDO50_RS21185;product=acyl-CoA dehydrogenase family protein;protein_id=WP_045577668.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 35626 36477 . - . ID=gene-LDO50_RS21190;Name=LDO50_RS21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21190;old_locus_tag=BVI1335_40030 NZ_CAJZAO010000316.1 Protein Homology CDS 35626 36477 . - 0 ID=cds-WP_059603030.1;Parent=gene-LDO50_RS21190;Dbxref=GenBank:WP_059603030.1;Name=WP_059603030.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659640.1;locus_tag=LDO50_RS21190;product=helix-turn-helix domain-containing protein;protein_id=WP_059603030.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq gene 36676 38052 . - . ID=gene-LDO50_RS21195;Name=LDO50_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21195;old_locus_tag=BVI1335_40032 NZ_CAJZAO010000316.1 Protein Homology CDS 36676 38052 . - 0 ID=cds-WP_069246413.1;Parent=gene-LDO50_RS21195;Dbxref=GenBank:WP_069246413.1;Name=WP_069246413.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724077.1;locus_tag=LDO50_RS21195;product=MFS transporter;protein_id=WP_069246413.1;transl_table=11 NZ_CAJZAO010000316.1 RefSeq pseudogene 38303 38463 . + . ID=gene-LDO50_RS21200;Name=LDO50_RS21200;end_range=38463,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS21200;partial=true;pseudo=true NZ_CAJZAO010000316.1 Protein Homology CDS 38303 38463 . + 0 ID=cds-LDO50_RS21200;Parent=gene-LDO50_RS21200;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=38463,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406866.1;locus_tag=LDO50_RS21200;partial=true;product=aldehyde dehydrogenase (NADP(+));pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000317.1 1 107405 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000317.1 RefSeq region 1 107405 . + . ID=NZ_CAJZAO010000317.1:1..107405;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_40 NZ_CAJZAO010000317.1 RefSeq gene 1 1817 . - . ID=gene-LDO50_RS21205;Name=LDO50_RS21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21205;partial=true;start_range=.,1 NZ_CAJZAO010000317.1 Protein Homology CDS 1 1817 . - 0 ID=cds-WP_290370766.1;Parent=gene-LDO50_RS21205;Dbxref=GenBank:WP_290370766.1;Name=WP_290370766.1;Ontology_term=GO:0016787,GO:0016810,GO:0017168;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749640.1;locus_tag=LDO50_RS21205;partial=true;product=hydantoinase/oxoprolinase family protein;protein_id=WP_290370766.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 1935 3242 . - . ID=gene-LDO50_RS21210;Name=LDO50_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21210;old_locus_tag=BVI1335_400002 NZ_CAJZAO010000317.1 Protein Homology CDS 1935 3242 . - 0 ID=cds-WP_011881368.1;Parent=gene-LDO50_RS21210;Dbxref=GenBank:WP_011881368.1;Name=WP_011881368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356167.1;locus_tag=LDO50_RS21210;product=MFS transporter;protein_id=WP_011881368.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 3313 4086 . - . ID=gene-LDO50_RS21215;Name=LDO50_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21215;old_locus_tag=BVI1335_400003 NZ_CAJZAO010000317.1 Protein Homology CDS 3313 4086 . - 0 ID=cds-WP_011881367.1;Parent=gene-LDO50_RS21215;Dbxref=GenBank:WP_011881367.1;Name=WP_011881367.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694590.1;locus_tag=LDO50_RS21215;product=putative hydro-lyase;protein_id=WP_011881367.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 4292 5224 . + . ID=gene-LDO50_RS21220;Name=LDO50_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21220;old_locus_tag=BVI1335_400004 NZ_CAJZAO010000317.1 Protein Homology CDS 4292 5224 . + 0 ID=cds-WP_224020114.1;Parent=gene-LDO50_RS21220;Dbxref=GenBank:WP_224020114.1;Name=WP_224020114.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330520.1;locus_tag=LDO50_RS21220;product=LysR family transcriptional regulator;protein_id=WP_224020114.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 5508 6221 . + . ID=gene-LDO50_RS21225;Name=LDO50_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21225;old_locus_tag=BVI1335_400005 NZ_CAJZAO010000317.1 GeneMarkS-2+ CDS 5508 6221 . + 0 ID=cds-WP_041494068.1;Parent=gene-LDO50_RS21225;Dbxref=GenBank:WP_041494068.1;Name=WP_041494068.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS21225;product=hypothetical protein;protein_id=WP_041494068.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 6280 7587 . - . ID=gene-LDO50_RS21230;Name=LDO50_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21230;old_locus_tag=BVI1335_400006 NZ_CAJZAO010000317.1 Protein Homology CDS 6280 7587 . - 0 ID=cds-WP_224020115.1;Parent=gene-LDO50_RS21230;Dbxref=GenBank:WP_224020115.1;Name=WP_224020115.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724459.1;locus_tag=LDO50_RS21230;product=MFS transporter;protein_id=WP_224020115.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 7877 8830 . - . ID=gene-LDO50_RS21235;Name=LDO50_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21235;old_locus_tag=BVI1335_400007 NZ_CAJZAO010000317.1 Protein Homology CDS 7877 8830 . - 0 ID=cds-WP_059463725.1;Parent=gene-LDO50_RS21235;Dbxref=GenBank:WP_059463725.1;Name=WP_059463725.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724458.1;locus_tag=LDO50_RS21235;product=LysR family transcriptional regulator;protein_id=WP_059463725.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 8957 9976 . + . ID=gene-LDO50_RS21240;Name=LDO50_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21240;old_locus_tag=BVI1335_400008 NZ_CAJZAO010000317.1 Protein Homology CDS 8957 9976 . + 0 ID=cds-WP_224020116.1;Parent=gene-LDO50_RS21240;Dbxref=GenBank:WP_224020116.1;Name=WP_224020116.1;Ontology_term=GO:0008270,GO:0016491,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881364.1;locus_tag=LDO50_RS21240;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_224020116.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 10127 11275 . - . ID=gene-LDO50_RS21245;Name=LDO50_RS21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21245;old_locus_tag=BVI1335_400009 NZ_CAJZAO010000317.1 Protein Homology CDS 10127 11275 . - 0 ID=cds-WP_059560776.1;Parent=gene-LDO50_RS21245;Dbxref=GenBank:WP_059560776.1;Name=WP_059560776.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900333.1;locus_tag=LDO50_RS21245;product=porin;protein_id=WP_059560776.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 11484 12098 . + . ID=gene-LDO50_RS21250;Name=LDO50_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21250;old_locus_tag=BVI1335_400010 NZ_CAJZAO010000317.1 Protein Homology CDS 11484 12098 . + 0 ID=cds-WP_014724455.1;Parent=gene-LDO50_RS21250;Dbxref=GenBank:WP_014724455.1;Name=WP_014724455.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495723.1;locus_tag=LDO50_RS21250;product=LysE family transporter;protein_id=WP_014724455.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 12142 12933 . - . ID=gene-LDO50_RS21255;Name=LDO50_RS21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21255;old_locus_tag=BVI1335_400011 NZ_CAJZAO010000317.1 Protein Homology CDS 12142 12933 . - 0 ID=cds-WP_176314914.1;Parent=gene-LDO50_RS21255;Dbxref=GenBank:WP_176314914.1;Name=WP_176314914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484617.1;locus_tag=LDO50_RS21255;product=alpha/beta fold hydrolase;protein_id=WP_176314914.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 13015 13374 . - . ID=gene-LDO50_RS21260;Name=LDO50_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21260;old_locus_tag=BVI1335_400012 NZ_CAJZAO010000317.1 Protein Homology CDS 13015 13374 . - 0 ID=cds-WP_059460024.1;Parent=gene-LDO50_RS21260;Dbxref=GenBank:WP_059460024.1;Name=WP_059460024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479766.1;locus_tag=LDO50_RS21260;product=DUF4148 domain-containing protein;protein_id=WP_059460024.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 13650 14174 . - . ID=gene-LDO50_RS21265;Name=LDO50_RS21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21265;old_locus_tag=BVI1335_400014 NZ_CAJZAO010000317.1 Protein Homology CDS 13650 14174 . - 0 ID=cds-WP_014724452.1;Parent=gene-LDO50_RS21265;Dbxref=GenBank:WP_014724452.1;Name=WP_014724452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757012.1;locus_tag=LDO50_RS21265;product=cytochrome P460 family protein;protein_id=WP_014724452.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 14174 15217 . - . ID=gene-LDO50_RS21270;Name=LDO50_RS21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21270;old_locus_tag=BVI1335_400015 NZ_CAJZAO010000317.1 Protein Homology CDS 14174 15217 . - 0 ID=cds-WP_059462058.1;Parent=gene-LDO50_RS21270;Dbxref=GenBank:WP_059462058.1;Name=WP_059462058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900344.1;locus_tag=LDO50_RS21270;product=alpha/beta fold hydrolase;protein_id=WP_059462058.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 15464 16741 . - . ID=gene-LDO50_RS21275;Name=LDO50_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21275;old_locus_tag=BVI1335_400016 NZ_CAJZAO010000317.1 Protein Homology CDS 15464 16741 . - 0 ID=cds-WP_059462059.1;Parent=gene-LDO50_RS21275;Dbxref=GenBank:WP_059462059.1;Name=WP_059462059.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365336.1;locus_tag=LDO50_RS21275;product=epoxide hydrolase family protein;protein_id=WP_059462059.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 16922 17518 . - . ID=gene-LDO50_RS21280;Name=LDO50_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21280;old_locus_tag=BVI1335_400017 NZ_CAJZAO010000317.1 Protein Homology CDS 16922 17518 . - 0 ID=cds-WP_176314913.1;Parent=gene-LDO50_RS21280;Dbxref=GenBank:WP_176314913.1;Name=WP_176314913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900347.1;locus_tag=LDO50_RS21280;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_176314913.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 17609 17794 . - . ID=gene-LDO50_RS21285;Name=LDO50_RS21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21285;old_locus_tag=BVI1335_400018 NZ_CAJZAO010000317.1 Protein Homology CDS 17609 17794 . - 0 ID=cds-WP_011881355.1;Parent=gene-LDO50_RS21285;Dbxref=GenBank:WP_011881355.1;Name=WP_011881355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365334.1;locus_tag=LDO50_RS21285;product=hypothetical protein;protein_id=WP_011881355.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 17805 19004 . - . ID=gene-LDO50_RS21290;Name=LDO50_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21290;old_locus_tag=BVI1335_400019 NZ_CAJZAO010000317.1 Protein Homology CDS 17805 19004 . - 0 ID=cds-WP_176314912.1;Parent=gene-LDO50_RS21290;Dbxref=GenBank:WP_176314912.1;Name=WP_176314912.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365333.1;locus_tag=LDO50_RS21290;product=aminotransferase-like domain-containing protein;protein_id=WP_176314912.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 19376 19564 . - . ID=gene-LDO50_RS21295;Name=LDO50_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21295;old_locus_tag=BVI1335_400020 NZ_CAJZAO010000317.1 Protein Homology CDS 19376 19564 . - 0 ID=cds-WP_014724447.1;Parent=gene-LDO50_RS21295;Dbxref=GenBank:WP_014724447.1;Name=WP_014724447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724447.1;locus_tag=LDO50_RS21295;product=hypothetical protein;protein_id=WP_014724447.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 19625 20809 . - . ID=gene-LDO50_RS21300;Name=LDO50_RS21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21300;old_locus_tag=BVI1335_400021 NZ_CAJZAO010000317.1 Protein Homology CDS 19625 20809 . - 0 ID=cds-WP_045578269.1;Parent=gene-LDO50_RS21300;Dbxref=GenBank:WP_045578269.1;Name=WP_045578269.1;Ontology_term=GO:0016746,GO:0016747;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881353.1;locus_tag=LDO50_RS21300;product=thiolase family protein;protein_id=WP_045578269.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 20979 21164 . - . ID=gene-LDO50_RS21305;Name=LDO50_RS21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21305;old_locus_tag=BVI1335_400022 NZ_CAJZAO010000317.1 Protein Homology CDS 20979 21164 . - 0 ID=cds-WP_011881352.1;Parent=gene-LDO50_RS21305;Dbxref=GenBank:WP_011881352.1;Name=WP_011881352.1;Ontology_term=GO:0043448,GO:0005506,GO:0009055;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=alkane catabolic process|0043448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749607.1;locus_tag=LDO50_RS21305;product=rubredoxin;protein_id=WP_011881352.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 21161 22084 . - . ID=gene-LDO50_RS21310;Name=LDO50_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21310;old_locus_tag=BVI1335_400023 NZ_CAJZAO010000317.1 Protein Homology CDS 21161 22084 . - 0 ID=cds-WP_011881351.1;Parent=gene-LDO50_RS21310;Dbxref=GenBank:WP_011881351.1;Name=WP_011881351.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881351.1;locus_tag=LDO50_RS21310;product=alpha/beta hydrolase;protein_id=WP_011881351.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 22084 23181 . - . ID=gene-LDO50_RS21315;Name=LDO50_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21315;old_locus_tag=BVI1335_400024 NZ_CAJZAO010000317.1 Protein Homology CDS 22084 23181 . - 0 ID=cds-WP_011881350.1;Parent=gene-LDO50_RS21315;Dbxref=GenBank:WP_011881350.1;Name=WP_011881350.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749605.1;locus_tag=LDO50_RS21315;product=fatty acid desaturase;protein_id=WP_011881350.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 23195 23515 . - . ID=gene-LDO50_RS21320;Name=LDO50_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21320;old_locus_tag=BVI1335_400025 NZ_CAJZAO010000317.1 Protein Homology CDS 23195 23515 . - 0 ID=cds-WP_011881349.1;Parent=gene-LDO50_RS21320;Dbxref=GenBank:WP_011881349.1;Name=WP_011881349.1;Ontology_term=GO:0006633,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749604.1;locus_tag=LDO50_RS21320;product=acyl carrier protein;protein_id=WP_011881349.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 23571 24554 . - . ID=gene-LDO50_RS21325;Name=LDO50_RS21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21325;old_locus_tag=BVI1335_400026 NZ_CAJZAO010000317.1 Protein Homology CDS 23571 24554 . - 0 ID=cds-WP_034194883.1;Parent=gene-LDO50_RS21325;Dbxref=GenBank:WP_034194883.1;Name=WP_034194883.1;Ontology_term=GO:0006633,GO:0006636,GO:0016717,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on paired donors%2C with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water|0016717||IEA,metal ion binding|0046872||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,unsaturated fatty acid biosynthetic process|0006636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724444.1;locus_tag=LDO50_RS21325;product=acyl-CoA desaturase;protein_id=WP_034194883.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 24580 25539 . - . ID=gene-LDO50_RS21330;Name=LDO50_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21330;old_locus_tag=BVI1335_400027 NZ_CAJZAO010000317.1 Protein Homology CDS 24580 25539 . - 0 ID=cds-WP_176314911.1;Parent=gene-LDO50_RS21330;Dbxref=GenBank:WP_176314911.1;Name=WP_176314911.1;Ontology_term=GO:0006633,GO:0006636,GO:0016717,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on paired donors%2C with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water|0016717||IEA,metal ion binding|0046872||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,unsaturated fatty acid biosynthetic process|0006636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881347.1;locus_tag=LDO50_RS21330;product=acyl-CoA desaturase;protein_id=WP_176314911.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 25600 27399 . - . ID=gene-LDO50_RS21335;Name=LDO50_RS21335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21335;old_locus_tag=BVI1335_400028 NZ_CAJZAO010000317.1 Protein Homology CDS 25600 27399 . - 0 ID=cds-WP_224020117.1;Parent=gene-LDO50_RS21335;Dbxref=GenBank:WP_224020117.1;Name=WP_224020117.1;Ontology_term=GO:0006631,GO:0016874;gbkey=CDS;go_function=ligase activity|0016874||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881346.1;locus_tag=LDO50_RS21335;product=fatty acyl-AMP ligase;protein_id=WP_224020117.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 27478 28896 . - . ID=gene-LDO50_RS21340;Name=LDO50_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21340;old_locus_tag=BVI1335_400029 NZ_CAJZAO010000317.1 Protein Homology CDS 27478 28896 . - 0 ID=cds-WP_011881345.1;Parent=gene-LDO50_RS21340;Dbxref=GenBank:WP_011881345.1;Name=WP_011881345.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881345.1;locus_tag=LDO50_RS21340;product=MFS transporter;protein_id=WP_011881345.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 28901 29818 . - . ID=gene-LDO50_RS21345;Name=LDO50_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21345;old_locus_tag=BVI1335_400030 NZ_CAJZAO010000317.1 Protein Homology CDS 28901 29818 . - 0 ID=cds-WP_045578271.1;Parent=gene-LDO50_RS21345;Dbxref=GenBank:WP_045578271.1;Name=WP_045578271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724440.1;locus_tag=LDO50_RS21345;product=hypothetical protein;protein_id=WP_045578271.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 29815 30819 . - . ID=gene-LDO50_RS21350;Name=LDO50_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21350;old_locus_tag=BVI1335_400031 NZ_CAJZAO010000317.1 Protein Homology CDS 29815 30819 . - 0 ID=cds-WP_045578272.1;Parent=gene-LDO50_RS21350;Dbxref=GenBank:WP_045578272.1;Name=WP_045578272.1;Ontology_term=GO:0016491,GO:0051537;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724439.1;locus_tag=LDO50_RS21350;product=aromatic ring-hydroxylating dioxygenase subunit alpha;protein_id=WP_045578272.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 30900 31982 . - . ID=gene-LDO50_RS21355;Name=LDO50_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21355;old_locus_tag=BVI1335_400032 NZ_CAJZAO010000317.1 Protein Homology CDS 30900 31982 . - 0 ID=cds-WP_011881342.1;Parent=gene-LDO50_RS21355;Dbxref=GenBank:WP_011881342.1;Name=WP_011881342.1;Ontology_term=GO:0006633,GO:0016717,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on paired donors%2C with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water|0016717||IEA,metal ion binding|0046872||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756997.1;locus_tag=LDO50_RS21355;product=fatty acid desaturase family protein;protein_id=WP_011881342.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 32091 33476 . - . ID=gene-LDO50_RS21360;Name=LDO50_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21360;old_locus_tag=BVI1335_400033 NZ_CAJZAO010000317.1 Protein Homology CDS 32091 33476 . - 0 ID=cds-WP_176314910.1;Parent=gene-LDO50_RS21360;Dbxref=GenBank:WP_176314910.1;Name=WP_176314910.1;Ontology_term=GO:0000166,GO:0016491,GO:0071949;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749596.1;locus_tag=LDO50_RS21360;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_176314910.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 33649 34941 . - . ID=gene-LDO50_RS21365;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=LDO50_RS21365;old_locus_tag=BVI1335_400034 NZ_CAJZAO010000317.1 Protein Homology CDS 33649 34941 . - 0 ID=cds-WP_011881340.1;Parent=gene-LDO50_RS21365;Dbxref=GenBank:WP_011881340.1;Name=WP_011881340.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756995.1;locus_tag=LDO50_RS21365;product=beta-ketoacyl-ACP synthase II;protein_id=WP_011881340.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 35097 35756 . - . ID=gene-LDO50_RS21370;Name=LDO50_RS21370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21370;old_locus_tag=BVI1335_400036 NZ_CAJZAO010000317.1 Protein Homology CDS 35097 35756 . - 0 ID=cds-WP_011881339.1;Parent=gene-LDO50_RS21370;Dbxref=GenBank:WP_011881339.1;Name=WP_011881339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881339.1;locus_tag=LDO50_RS21370;product=acyl-homoserine-lactone synthase;protein_id=WP_011881339.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 36151 36534 . - . ID=gene-LDO50_RS21375;Name=LDO50_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21375;old_locus_tag=BVI1335_400037 NZ_CAJZAO010000317.1 Protein Homology CDS 36151 36534 . - 0 ID=cds-WP_034194879.1;Parent=gene-LDO50_RS21375;Dbxref=GenBank:WP_034194879.1;Name=WP_034194879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756993.1;locus_tag=LDO50_RS21375;product=DUF4902 domain-containing protein;protein_id=WP_034194879.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 36706 36924 . + . ID=gene-LDO50_RS21380;Name=LDO50_RS21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21380 NZ_CAJZAO010000317.1 GeneMarkS-2+ CDS 36706 36924 . + 0 ID=cds-WP_124259904.1;Parent=gene-LDO50_RS21380;Dbxref=GenBank:WP_124259904.1;Name=WP_124259904.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS21380;product=hypothetical protein;protein_id=WP_124259904.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 36932 37675 . + . ID=gene-LDO50_RS21385;Name=LDO50_RS21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21385;old_locus_tag=BVI1335_400039 NZ_CAJZAO010000317.1 Protein Homology CDS 36932 37675 . + 0 ID=cds-WP_224020119.1;Parent=gene-LDO50_RS21385;Dbxref=GenBank:WP_224020119.1;Name=WP_224020119.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756992.1;locus_tag=LDO50_RS21385;product=helix-turn-helix transcriptional regulator;protein_id=WP_224020119.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 37870 39216 . + . ID=gene-LDO50_RS21390;Name=LDO50_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21390;old_locus_tag=BVI1335_400040 NZ_CAJZAO010000317.1 Protein Homology CDS 37870 39216 . + 0 ID=cds-WP_060090715.1;Parent=gene-LDO50_RS21390;Dbxref=GenBank:WP_060090715.1;Name=WP_060090715.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365331.1;locus_tag=LDO50_RS21390;product=MFS transporter;protein_id=WP_060090715.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 39305 39877 . + . ID=gene-LDO50_RS21395;Name=LDO50_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21395;old_locus_tag=BVI1335_400041 NZ_CAJZAO010000317.1 Protein Homology CDS 39305 39877 . + 0 ID=cds-WP_034194877.1;Parent=gene-LDO50_RS21395;Dbxref=GenBank:WP_034194877.1;Name=WP_034194877.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756989.1;locus_tag=LDO50_RS21395;product=PAS and helix-turn-helix domain-containing protein;protein_id=WP_034194877.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 40007 41179 . - . ID=gene-LDO50_RS21400;Name=LDO50_RS21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21400;old_locus_tag=BVI1335_400042 NZ_CAJZAO010000317.1 Protein Homology CDS 40007 41179 . - 0 ID=cds-WP_014724430.1;Parent=gene-LDO50_RS21400;Dbxref=GenBank:WP_014724430.1;Name=WP_014724430.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356268.1;locus_tag=LDO50_RS21400;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_014724430.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 41326 42477 . - . ID=gene-LDO50_RS21405;Name=LDO50_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21405;old_locus_tag=BVI1335_400043 NZ_CAJZAO010000317.1 Protein Homology CDS 41326 42477 . - 0 ID=cds-WP_014724429.1;Parent=gene-LDO50_RS21405;Dbxref=GenBank:WP_014724429.1;Name=WP_014724429.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217652.1;locus_tag=LDO50_RS21405;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_014724429.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 42788 42991 . - . ID=gene-LDO50_RS21410;Name=LDO50_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21410;old_locus_tag=BVI1335_400044 NZ_CAJZAO010000317.1 Protein Homology CDS 42788 42991 . - 0 ID=cds-WP_014724428.1;Parent=gene-LDO50_RS21410;Dbxref=GenBank:WP_014724428.1;Name=WP_014724428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724428.1;locus_tag=LDO50_RS21410;product=CsbD family protein;protein_id=WP_014724428.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 43145 44665 . - . ID=gene-LDO50_RS21415;Name=LDO50_RS21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21415;old_locus_tag=BVI1335_400045 NZ_CAJZAO010000317.1 Protein Homology CDS 43145 44665 . - 0 ID=cds-WP_014724427.1;Parent=gene-LDO50_RS21415;Dbxref=GenBank:WP_014724427.1;Name=WP_014724427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724427.1;locus_tag=LDO50_RS21415;product=helix-turn-helix transcriptional regulator;protein_id=WP_014724427.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 45049 45213 . + . ID=gene-LDO50_RS21420;Name=LDO50_RS21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21420;old_locus_tag=BVI1335_400046 NZ_CAJZAO010000317.1 Protein Homology CDS 45049 45213 . + 0 ID=cds-WP_172820421.1;Parent=gene-LDO50_RS21420;Dbxref=GenBank:WP_172820421.1;Name=WP_172820421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484627.1;locus_tag=LDO50_RS21420;product=hypothetical protein;protein_id=WP_172820421.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 45291 45641 . + . ID=gene-LDO50_RS21425;Name=LDO50_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21425;old_locus_tag=BVI1335_400047 NZ_CAJZAO010000317.1 Protein Homology CDS 45291 45641 . + 0 ID=cds-WP_059735863.1;Parent=gene-LDO50_RS21425;Dbxref=GenBank:WP_059735863.1;Name=WP_059735863.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749572.1;locus_tag=LDO50_RS21425;product=BON domain-containing protein;protein_id=WP_059735863.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 45695 45892 . + . ID=gene-LDO50_RS21430;Name=LDO50_RS21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21430;old_locus_tag=BVI1335_400049 NZ_CAJZAO010000317.1 Protein Homology CDS 45695 45892 . + 0 ID=cds-WP_014724426.1;Parent=gene-LDO50_RS21430;Dbxref=GenBank:WP_014724426.1;Name=WP_014724426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397770.1;locus_tag=LDO50_RS21430;product=CsbD family protein;protein_id=WP_014724426.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 46119 47153 . - . ID=gene-LDO50_RS21435;Name=LDO50_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21435;old_locus_tag=BVI1335_400051 NZ_CAJZAO010000317.1 Protein Homology CDS 46119 47153 . - 0 ID=cds-WP_045578276.1;Parent=gene-LDO50_RS21435;Dbxref=GenBank:WP_045578276.1;Name=WP_045578276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724425.1;locus_tag=LDO50_RS21435;product=DUF1338 domain-containing protein;protein_id=WP_045578276.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 47374 48318 . + . ID=gene-LDO50_RS21440;Name=LDO50_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21440;old_locus_tag=BVI1335_400052 NZ_CAJZAO010000317.1 Protein Homology CDS 47374 48318 . + 0 ID=cds-WP_014724424.1;Parent=gene-LDO50_RS21440;Dbxref=GenBank:WP_014724424.1;Name=WP_014724424.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724424.1;locus_tag=LDO50_RS21440;product=LysR family transcriptional regulator;protein_id=WP_014724424.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 48779 50407 . + . ID=gene-LDO50_RS21445;Name=LDO50_RS21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21445;old_locus_tag=BVI1335_400053 NZ_CAJZAO010000317.1 Protein Homology CDS 48779 50407 . + 0 ID=cds-WP_059735861.1;Parent=gene-LDO50_RS21445;Dbxref=GenBank:WP_059735861.1;Name=WP_059735861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766794.1;locus_tag=LDO50_RS21445;product=NADP-dependent glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_059735861.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 50517 50753 . - . ID=gene-LDO50_RS21450;Name=LDO50_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21450;old_locus_tag=BVI1335_400054 NZ_CAJZAO010000317.1 GeneMarkS-2+ CDS 50517 50753 . - 0 ID=cds-WP_059582174.1;Parent=gene-LDO50_RS21450;Dbxref=GenBank:WP_059582174.1;Name=WP_059582174.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS21450;product=hypothetical protein;protein_id=WP_059582174.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 50824 51288 . - . ID=gene-LDO50_RS21455;Name=LDO50_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21455;old_locus_tag=BVI1335_400055 NZ_CAJZAO010000317.1 Protein Homology CDS 50824 51288 . - 0 ID=cds-WP_014724421.1;Parent=gene-LDO50_RS21455;Dbxref=GenBank:WP_014724421.1;Name=WP_014724421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724421.1;locus_tag=LDO50_RS21455;product=DUF2846 domain-containing protein;protein_id=WP_014724421.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 51442 52557 . - . ID=gene-LDO50_RS21460;Name=LDO50_RS21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21460;old_locus_tag=BVI1335_400056 NZ_CAJZAO010000317.1 GeneMarkS-2+ CDS 51442 52557 . - 0 ID=cds-WP_059890520.1;Parent=gene-LDO50_RS21460;Dbxref=GenBank:WP_059890520.1;Name=WP_059890520.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS21460;product=hypothetical protein;protein_id=WP_059890520.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 53089 53673 . - . ID=gene-LDO50_RS21465;Name=LDO50_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21465;old_locus_tag=BVI1335_400058 NZ_CAJZAO010000317.1 Protein Homology CDS 53089 53673 . - 0 ID=cds-WP_011881337.1;Parent=gene-LDO50_RS21465;Dbxref=GenBank:WP_011881337.1;Name=WP_011881337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881337.1;locus_tag=LDO50_RS21465;product=hypothetical protein;protein_id=WP_011881337.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 53947 55701 . - . ID=gene-LDO50_RS21470;Name=LDO50_RS21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21470;old_locus_tag=BVI1335_400061 NZ_CAJZAO010000317.1 Protein Homology CDS 53947 55701 . - 0 ID=cds-WP_060090724.1;Parent=gene-LDO50_RS21470;Dbxref=GenBank:WP_060090724.1;Name=WP_060090724.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658790.1;locus_tag=LDO50_RS21470;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_060090724.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 56127 56396 . - . ID=gene-LDO50_RS21475;Name=LDO50_RS21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21475 NZ_CAJZAO010000317.1 Protein Homology CDS 56127 56396 . - 0 ID=cds-WP_011881335.1;Parent=gene-LDO50_RS21475;Dbxref=GenBank:WP_011881335.1;Name=WP_011881335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881335.1;locus_tag=LDO50_RS21475;product=hypothetical protein;protein_id=WP_011881335.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 56957 57355 . - . ID=gene-LDO50_RS21480;Name=LDO50_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21480;old_locus_tag=BVI1335_400066 NZ_CAJZAO010000317.1 GeneMarkS-2+ CDS 56957 57355 . - 0 ID=cds-WP_034194866.1;Parent=gene-LDO50_RS21480;Dbxref=GenBank:WP_034194866.1;Name=WP_034194866.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS21480;product=hypothetical protein;protein_id=WP_034194866.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 58419 58640 . - . ID=gene-LDO50_RS21485;Name=LDO50_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21485;old_locus_tag=BVI1335_400069 NZ_CAJZAO010000317.1 Protein Homology CDS 58419 58640 . - 0 ID=cds-WP_034194865.1;Parent=gene-LDO50_RS21485;Dbxref=GenBank:WP_034194865.1;Name=WP_034194865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013592178.1;locus_tag=LDO50_RS21485;product=hypothetical protein;protein_id=WP_034194865.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 58637 69175 . - . ID=gene-LDO50_RS21490;Name=LDO50_RS21490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21490;old_locus_tag=BVI1335_400070 NZ_CAJZAO010000317.1 Protein Homology CDS 58637 69175 . - 0 ID=cds-WP_224020122.1;Parent=gene-LDO50_RS21490;Dbxref=GenBank:WP_224020122.1;Name=WP_224020122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881332.1;locus_tag=LDO50_RS21490;product=hemagglutinin repeat-containing protein;protein_id=WP_224020122.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 69825 70004 . + . ID=gene-LDO50_RS31975;Name=LDO50_RS31975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31975;old_locus_tag=BVI1335_400071 NZ_CAJZAO010000317.1 GeneMarkS-2+ CDS 69825 70004 . + 0 ID=cds-WP_144410634.1;Parent=gene-LDO50_RS31975;Dbxref=GenBank:WP_144410634.1;Name=WP_144410634.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS31975;product=hypothetical protein;protein_id=WP_144410634.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 70645 70965 . + . ID=gene-LDO50_RS21495;Name=LDO50_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21495;old_locus_tag=BVI1335_400072 NZ_CAJZAO010000317.1 Protein Homology CDS 70645 70965 . + 0 ID=cds-WP_011881331.1;Parent=gene-LDO50_RS21495;Dbxref=GenBank:WP_011881331.1;Name=WP_011881331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900369.1;locus_tag=LDO50_RS21495;product=DNA-binding protein;protein_id=WP_011881331.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 71288 71608 . + . ID=gene-LDO50_RS21500;Name=LDO50_RS21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21500;old_locus_tag=BVI1335_400073 NZ_CAJZAO010000317.1 Protein Homology CDS 71288 71608 . + 0 ID=cds-WP_045578281.1;Parent=gene-LDO50_RS21500;Dbxref=GenBank:WP_045578281.1;Name=WP_045578281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724414.1;locus_tag=LDO50_RS21500;product=DUF1330 domain-containing protein;protein_id=WP_045578281.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 71629 72465 . - . ID=gene-LDO50_RS21505;Name=LDO50_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21505;old_locus_tag=BVI1335_400074 NZ_CAJZAO010000317.1 Protein Homology CDS 71629 72465 . - 0 ID=cds-WP_011881329.1;Parent=gene-LDO50_RS21505;Dbxref=GenBank:WP_011881329.1;Name=WP_011881329.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495775.1;locus_tag=LDO50_RS21505;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_011881329.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 72692 73684 . + . ID=gene-LDO50_RS21510;Name=LDO50_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21510;old_locus_tag=BVI1335_400075 NZ_CAJZAO010000317.1 Protein Homology CDS 72692 73684 . + 0 ID=cds-WP_014724413.1;Parent=gene-LDO50_RS21510;Dbxref=GenBank:WP_014724413.1;Name=WP_014724413.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881328.1;locus_tag=LDO50_RS21510;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_014724413.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 74020 75312 . - . ID=gene-LDO50_RS21515;Name=LDO50_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21515;old_locus_tag=BVI1335_400076 NZ_CAJZAO010000317.1 Protein Homology CDS 74020 75312 . - 0 ID=cds-WP_224020123.1;Parent=gene-LDO50_RS21515;Dbxref=GenBank:WP_224020123.1;Name=WP_224020123.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724412.1;locus_tag=LDO50_RS21515;product=MFS transporter;protein_id=WP_224020123.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 75891 76427 . + . ID=gene-LDO50_RS21520;Name=LDO50_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21520;old_locus_tag=BVI1335_400077 NZ_CAJZAO010000317.1 Protein Homology CDS 75891 76427 . + 0 ID=cds-WP_011881325.1;Parent=gene-LDO50_RS21520;Dbxref=GenBank:WP_011881325.1;Name=WP_011881325.1;Ontology_term=GO:0006281,GO:0032259,GO:0003677,GO:0003908,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495779.1;locus_tag=LDO50_RS21520;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_011881325.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 76462 76959 . - . ID=gene-LDO50_RS21525;Name=LDO50_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21525;old_locus_tag=BVI1335_400079 NZ_CAJZAO010000317.1 Protein Homology CDS 76462 76959 . - 0 ID=cds-WP_014724410.1;Parent=gene-LDO50_RS21525;Dbxref=GenBank:WP_014724410.1;Name=WP_014724410.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724410.1;locus_tag=LDO50_RS21525;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_014724410.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 77116 78945 . + . ID=gene-LDO50_RS21530;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LDO50_RS21530;old_locus_tag=BVI1335_400080 NZ_CAJZAO010000317.1 Protein Homology CDS 77116 78945 . + 0 ID=cds-WP_011881323.1;Parent=gene-LDO50_RS21530;Dbxref=GenBank:WP_011881323.1;Name=WP_011881323.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330587.1;locus_tag=LDO50_RS21530;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_011881323.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 79221 79862 . + . ID=gene-LDO50_RS21535;Name=LDO50_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21535;old_locus_tag=BVI1335_400081 NZ_CAJZAO010000317.1 Protein Homology CDS 79221 79862 . + 0 ID=cds-WP_014724408.1;Parent=gene-LDO50_RS21535;Dbxref=GenBank:WP_014724408.1;Name=WP_014724408.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881322.1;locus_tag=LDO50_RS21535;product=LemA family protein;protein_id=WP_014724408.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 79865 80704 . + . ID=gene-LDO50_RS21540;Name=LDO50_RS21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21540;old_locus_tag=BVI1335_400082 NZ_CAJZAO010000317.1 Protein Homology CDS 79865 80704 . + 0 ID=cds-WP_371464454.1;Parent=gene-LDO50_RS21540;Dbxref=GenBank:WP_371464454.1;Name=WP_371464454.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881321.1;locus_tag=LDO50_RS21540;product=TPM domain-containing protein;protein_id=WP_371464454.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 80707 81204 . + . ID=gene-LDO50_RS21545;Name=LDO50_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21545;old_locus_tag=BVI1335_400083 NZ_CAJZAO010000317.1 Protein Homology CDS 80707 81204 . + 0 ID=cds-WP_011881320.1;Parent=gene-LDO50_RS21545;Dbxref=GenBank:WP_011881320.1;Name=WP_011881320.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601221.1;locus_tag=LDO50_RS21545;product=TPM domain-containing protein;protein_id=WP_011881320.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 81361 81765 . + . ID=gene-LDO50_RS31145;Name=LDO50_RS31145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31145 NZ_CAJZAO010000317.1 Protein Homology CDS 81361 81765 . + 0 ID=cds-WP_059462092.1;Parent=gene-LDO50_RS31145;Dbxref=GenBank:WP_059462092.1;Name=WP_059462092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009971462.1;locus_tag=LDO50_RS31145;product=hypothetical protein;protein_id=WP_059462092.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 81854 82141 . + . ID=gene-LDO50_RS21555;Name=LDO50_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21555 NZ_CAJZAO010000317.1 Protein Homology CDS 81854 82141 . + 0 ID=cds-WP_080957690.1;Parent=gene-LDO50_RS21555;Dbxref=GenBank:WP_080957690.1;Name=WP_080957690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013093317.1;locus_tag=LDO50_RS21555;product=hypothetical protein;protein_id=WP_080957690.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 82138 83595 . + . ID=gene-LDO50_RS21560;Name=LDO50_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21560;old_locus_tag=BVI1335_400086 NZ_CAJZAO010000317.1 Protein Homology CDS 82138 83595 . + 0 ID=cds-WP_176322248.1;Parent=gene-LDO50_RS21560;Dbxref=GenBank:WP_176322248.1;Name=WP_176322248.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881318.1;locus_tag=LDO50_RS21560;product=TolC family protein;protein_id=WP_176322248.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 83597 84892 . + . ID=gene-LDO50_RS21565;Name=LDO50_RS21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21565;old_locus_tag=BVI1335_400087 NZ_CAJZAO010000317.1 Protein Homology CDS 83597 84892 . + 0 ID=cds-WP_060090740.1;Parent=gene-LDO50_RS21565;Dbxref=GenBank:WP_060090740.1;Name=WP_060090740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006046700.1;locus_tag=LDO50_RS21565;product=multicopper oxidase family protein;protein_id=WP_060090740.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 84959 85306 . + . ID=gene-LDO50_RS21570;Name=LDO50_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21570;old_locus_tag=BVI1335_400088 NZ_CAJZAO010000317.1 Protein Homology CDS 84959 85306 . + 0 ID=cds-WP_011881316.1;Parent=gene-LDO50_RS21570;Dbxref=GenBank:WP_011881316.1;Name=WP_011881316.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881316.1;locus_tag=LDO50_RS21570;product=copper-binding protein;protein_id=WP_011881316.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 85367 85741 . + . ID=gene-LDO50_RS21575;Name=copC;gbkey=Gene;gene=copC;gene_biotype=protein_coding;locus_tag=LDO50_RS21575;old_locus_tag=BVI1335_400089 NZ_CAJZAO010000317.1 Protein Homology CDS 85367 85741 . + 0 ID=cds-WP_011881315.1;Parent=gene-LDO50_RS21575;Dbxref=GenBank:WP_011881315.1;Name=WP_011881315.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507,GO:0042597;gbkey=CDS;gene=copC;go_component=periplasmic space|0042597||IEA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007589565.1;locus_tag=LDO50_RS21575;product=copper homeostasis periplasmic binding protein CopC;protein_id=WP_011881315.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 85741 86682 . + . ID=gene-LDO50_RS21580;Name=LDO50_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21580;old_locus_tag=BVI1335_400091 NZ_CAJZAO010000317.1 Protein Homology CDS 85741 86682 . + 0 ID=cds-WP_011881314.1;Parent=gene-LDO50_RS21580;Dbxref=GenBank:WP_011881314.1;Name=WP_011881314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009901086.1;locus_tag=LDO50_RS21580;product=copper resistance D family protein;protein_id=WP_011881314.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 86868 87269 . + . ID=gene-LDO50_RS21585;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=LDO50_RS21585;old_locus_tag=BVI1335_400092 NZ_CAJZAO010000317.1 Protein Homology CDS 86868 87269 . + 0 ID=cds-WP_034194857.1;Parent=gene-LDO50_RS21585;Dbxref=GenBank:WP_034194857.1;Name=WP_034194857.1;Ontology_term=GO:0045893,GO:0046688,GO:0003677,GO:0003700,GO:0005507;gbkey=CDS;gene=cueR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,copper ion binding|0005507||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724400.1;locus_tag=LDO50_RS21585;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_034194857.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 87345 89789 . + . ID=gene-LDO50_RS21590;Name=LDO50_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21590;old_locus_tag=BVI1335_400093 NZ_CAJZAO010000317.1 Protein Homology CDS 87345 89789 . + 0 ID=cds-WP_224020124.1;Parent=gene-LDO50_RS21590;Dbxref=GenBank:WP_224020124.1;Name=WP_224020124.1;Ontology_term=GO:0006812,GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0042626,GO:0046872,GO:0140358,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,P-type transmembrane transporter activity|0140358||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881312.1;locus_tag=LDO50_RS21590;product=heavy metal translocating P-type ATPase;protein_id=WP_224020124.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 89917 90789 . - . ID=gene-LDO50_RS21595;Name=LDO50_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21595;old_locus_tag=BVI1335_400096 NZ_CAJZAO010000317.1 Protein Homology CDS 89917 90789 . - 0 ID=cds-WP_011881311.1;Parent=gene-LDO50_RS21595;Dbxref=GenBank:WP_011881311.1;Name=WP_011881311.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881311.1;locus_tag=LDO50_RS21595;product=LysR family transcriptional regulator;protein_id=WP_011881311.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 90910 91341 . + . ID=gene-LDO50_RS21600;Name=LDO50_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21600;old_locus_tag=BVI1335_400097 NZ_CAJZAO010000317.1 Protein Homology CDS 90910 91341 . + 0 ID=cds-WP_176300901.1;Parent=gene-LDO50_RS21600;Dbxref=GenBank:WP_176300901.1;Name=WP_176300901.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881310.1;locus_tag=LDO50_RS21600;product=DoxX family protein;protein_id=WP_176300901.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 91359 92048 . + . ID=gene-LDO50_RS21605;Name=LDO50_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21605;old_locus_tag=BVI1335_400098 NZ_CAJZAO010000317.1 Protein Homology CDS 91359 92048 . + 0 ID=cds-WP_224020125.1;Parent=gene-LDO50_RS21605;Dbxref=GenBank:WP_224020125.1;Name=WP_224020125.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881309.1;locus_tag=LDO50_RS21605;product=glutathione S-transferase family protein;protein_id=WP_224020125.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 92612 93160 . + . ID=gene-LDO50_RS21610;Name=LDO50_RS21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21610;old_locus_tag=BVI1335_400101 NZ_CAJZAO010000317.1 Protein Homology CDS 92612 93160 . + 0 ID=cds-WP_059623058.1;Parent=gene-LDO50_RS21610;Dbxref=GenBank:WP_059623058.1;Name=WP_059623058.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724394.1;locus_tag=LDO50_RS21610;product=TetR/AcrR family transcriptional regulator;protein_id=WP_059623058.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 93299 93424 . + . ID=gene-LDO50_RS30885;Name=LDO50_RS30885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30885 NZ_CAJZAO010000317.1 GeneMarkS-2+ CDS 93299 93424 . + 0 ID=cds-WP_257785927.1;Parent=gene-LDO50_RS30885;Dbxref=GenBank:WP_257785927.1;Name=WP_257785927.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS30885;product=hypothetical protein;protein_id=WP_257785927.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 93500 94711 . + . ID=gene-LDO50_RS21615;Name=LDO50_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21615;old_locus_tag=BVI1335_400102 NZ_CAJZAO010000317.1 Protein Homology CDS 93500 94711 . + 0 ID=cds-WP_069224505.1;Parent=gene-LDO50_RS21615;Dbxref=GenBank:WP_069224505.1;Name=WP_069224505.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881306.1;locus_tag=LDO50_RS21615;product=MFS transporter;protein_id=WP_069224505.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 94763 95215 . + . ID=gene-LDO50_RS21620;Name=LDO50_RS21620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21620 NZ_CAJZAO010000317.1 GeneMarkS-2+ CDS 94763 95215 . + 0 ID=cds-WP_011881305.1;Parent=gene-LDO50_RS21620;Dbxref=GenBank:WP_011881305.1;Name=WP_011881305.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS21620;product=hypothetical protein;protein_id=WP_011881305.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 95401 95688 . - . ID=gene-LDO50_RS21625;Name=LDO50_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21625;old_locus_tag=BVI1335_400104 NZ_CAJZAO010000317.1 Protein Homology CDS 95401 95688 . - 0 ID=cds-WP_014724392.1;Parent=gene-LDO50_RS21625;Dbxref=GenBank:WP_014724392.1;Name=WP_014724392.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881304.1;locus_tag=LDO50_RS21625;product=putative quinol monooxygenase;protein_id=WP_014724392.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 95864 96400 . - . ID=gene-LDO50_RS21630;Name=LDO50_RS21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21630;old_locus_tag=BVI1335_400105 NZ_CAJZAO010000317.1 Protein Homology CDS 95864 96400 . - 0 ID=cds-WP_011881303.1;Parent=gene-LDO50_RS21630;Dbxref=GenBank:WP_011881303.1;Name=WP_011881303.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724391.1;locus_tag=LDO50_RS21630;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_011881303.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 96673 97041 . - . ID=gene-LDO50_RS21635;Name=LDO50_RS21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21635;old_locus_tag=BVI1335_400106 NZ_CAJZAO010000317.1 Protein Homology CDS 96673 97041 . - 0 ID=cds-WP_176044593.1;Parent=gene-LDO50_RS21635;Dbxref=GenBank:WP_176044593.1;Name=WP_176044593.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881301.1;locus_tag=LDO50_RS21635;product=BON domain-containing protein;protein_id=WP_176044593.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 97525 98325 . + . ID=gene-LDO50_RS21640;Name=LDO50_RS21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21640;old_locus_tag=BVI1335_400108 NZ_CAJZAO010000317.1 Protein Homology CDS 97525 98325 . + 0 ID=cds-WP_011881300.1;Parent=gene-LDO50_RS21640;Dbxref=GenBank:WP_011881300.1;Name=WP_011881300.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482433.1;locus_tag=LDO50_RS21640;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_011881300.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 98382 99143 . + . ID=gene-LDO50_RS21645;Name=LDO50_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21645;old_locus_tag=BVI1335_400109 NZ_CAJZAO010000317.1 Protein Homology CDS 98382 99143 . + 0 ID=cds-WP_011881299.1;Parent=gene-LDO50_RS21645;Dbxref=GenBank:WP_011881299.1;Name=WP_011881299.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881299.1;locus_tag=LDO50_RS21645;product=SDR family oxidoreductase;protein_id=WP_011881299.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 99188 100552 . + . ID=gene-LDO50_RS21650;Name=LDO50_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21650;old_locus_tag=BVI1335_400110 NZ_CAJZAO010000317.1 Protein Homology CDS 99188 100552 . + 0 ID=cds-WP_011881298.1;Parent=gene-LDO50_RS21650;Dbxref=GenBank:WP_011881298.1;Name=WP_011881298.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482403.1;locus_tag=LDO50_RS21650;product=FAD-dependent oxidoreductase;protein_id=WP_011881298.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 101026 102354 . + . ID=gene-LDO50_RS21655;Name=LDO50_RS21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21655;old_locus_tag=BVI1335_400111 NZ_CAJZAO010000317.1 Protein Homology CDS 101026 102354 . + 0 ID=cds-WP_034194849.1;Parent=gene-LDO50_RS21655;Dbxref=GenBank:WP_034194849.1;Name=WP_034194849.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881297.1;locus_tag=LDO50_RS21655;product=MFS transporter;protein_id=WP_034194849.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 102409 103053 . - . ID=gene-LDO50_RS21660;Name=LDO50_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21660;old_locus_tag=BVI1335_400112 NZ_CAJZAO010000317.1 Protein Homology CDS 102409 103053 . - 0 ID=cds-WP_011881296.1;Parent=gene-LDO50_RS21660;Dbxref=GenBank:WP_011881296.1;Name=WP_011881296.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482375.1;locus_tag=LDO50_RS21660;product=response regulator transcription factor;protein_id=WP_011881296.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 103050 104948 . - . ID=gene-LDO50_RS21665;Name=LDO50_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21665;old_locus_tag=BVI1335_400113 NZ_CAJZAO010000317.1 Protein Homology CDS 103050 104948 . - 0 ID=cds-WP_224020126.1;Parent=gene-LDO50_RS21665;Dbxref=GenBank:WP_224020126.1;Name=WP_224020126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482381.1;locus_tag=LDO50_RS21665;product=ATP-binding protein;protein_id=WP_224020126.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 104980 105360 . - . ID=gene-LDO50_RS21670;Name=LDO50_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21670;old_locus_tag=BVI1335_400114 NZ_CAJZAO010000317.1 Protein Homology CDS 104980 105360 . - 0 ID=cds-WP_011881294.1;Parent=gene-LDO50_RS21670;Dbxref=GenBank:WP_011881294.1;Name=WP_011881294.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881294.1;locus_tag=LDO50_RS21670;product=response regulator transcription factor;protein_id=WP_011881294.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 105518 106549 . - . ID=gene-LDO50_RS21675;Name=LDO50_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21675;old_locus_tag=BVI1335_400115 NZ_CAJZAO010000317.1 Protein Homology CDS 105518 106549 . - 0 ID=cds-WP_041494055.1;Parent=gene-LDO50_RS21675;Dbxref=GenBank:WP_041494055.1;Name=WP_041494055.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482426.1;locus_tag=LDO50_RS21675;product=LysR family transcriptional regulator;protein_id=WP_041494055.1;transl_table=11 NZ_CAJZAO010000317.1 RefSeq gene 106809 107405 . - . ID=gene-LDO50_RS21680;Name=LDO50_RS21680;end_range=107405,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21680;old_locus_tag=BVI1335_400116;partial=true NZ_CAJZAO010000317.1 Protein Homology CDS 106809 107405 . - 0 ID=cds-WP_224020127.1;Parent=gene-LDO50_RS21680;Dbxref=GenBank:WP_224020127.1;Name=WP_224020127.1;end_range=107405,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724384.1;locus_tag=LDO50_RS21680;partial=true;product=hypothetical protein;protein_id=WP_224020127.1;transl_table=11 ##sequence-region NZ_CAJZAO010000318.1 1 668 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000318.1 RefSeq region 1 668 . + . ID=NZ_CAJZAO010000318.1:1..668;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_41 NZ_CAJZAO010000318.1 RefSeq pseudogene 1 194 . + . ID=gene-LDO50_RS31980;Name=LDO50_RS31980;end_range=194,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31980;old_locus_tag=BVI1335_410001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000318.1 Protein Homology CDS 1 194 . + 0 ID=cds-LDO50_RS31980;Parent=gene-LDO50_RS31980;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;end_range=194,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354955.1;locus_tag=LDO50_RS31980;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000318.1 RefSeq gene 205 668 . + . ID=gene-LDO50_RS21685;Name=LDO50_RS21685;end_range=668,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21685;partial=true;start_range=.,205 NZ_CAJZAO010000318.1 Protein Homology CDS 205 668 . + 1 ID=cds-WP_443797854.1;Parent=gene-LDO50_RS21685;Dbxref=GenBank:WP_443797854.1;Name=WP_443797854.1;end_range=668,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354955.1;locus_tag=LDO50_RS21685;partial=true;product=phosphatidylglycerol lysyltransferase domain-containing protein;protein_id=WP_443797854.1;start_range=.,205;transl_table=11 ##sequence-region NZ_CAJZAO010000319.1 1 22045 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000319.1 RefSeq region 1 22045 . + . ID=NZ_CAJZAO010000319.1:1..22045;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_42 NZ_CAJZAO010000319.1 RefSeq pseudogene 1 175 . + . ID=gene-LDO50_RS21690;Name=LDO50_RS21690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS21690;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000319.1 Protein Homology CDS 1 175 . + 1 ID=cds-LDO50_RS21690;Parent=gene-LDO50_RS21690;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885169.1;locus_tag=LDO50_RS21690;partial=true;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000319.1 RefSeq gene 172 672 . + . ID=gene-LDO50_RS21695;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=LDO50_RS21695;old_locus_tag=BVI1335_420002 NZ_CAJZAO010000319.1 Protein Homology CDS 172 672 . + 0 ID=cds-WP_059464131.1;Parent=gene-LDO50_RS21695;Dbxref=GenBank:WP_059464131.1;Name=WP_059464131.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=protein-N-terminal-alanine acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364154.1;locus_tag=LDO50_RS21695;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_059464131.1;transl_table=11 NZ_CAJZAO010000319.1 RefSeq gene 659 1717 . + . ID=gene-LDO50_RS21700;Name=LDO50_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21700;old_locus_tag=BVI1335_420003 NZ_CAJZAO010000319.1 Protein Homology CDS 659 1717 . + 0 ID=cds-WP_224020129.1;Parent=gene-LDO50_RS21700;Dbxref=GenBank:WP_224020129.1;Name=WP_224020129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492692.1;locus_tag=LDO50_RS21700;product=uracil-DNA glycosylase;protein_id=WP_224020129.1;transl_table=11 NZ_CAJZAO010000319.1 RefSeq gene 1714 2673 . + . ID=gene-LDO50_RS21705;Name=LDO50_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21705;old_locus_tag=BVI1335_420004 NZ_CAJZAO010000319.1 Protein Homology CDS 1714 2673 . + 0 ID=cds-WP_224020130.1;Parent=gene-LDO50_RS21705;Dbxref=GenBank:WP_224020130.1;Name=WP_224020130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885166.1;locus_tag=LDO50_RS21705;product=DUF1853 family protein;protein_id=WP_224020130.1;transl_table=11 NZ_CAJZAO010000319.1 RefSeq gene 2692 3501 . - . ID=gene-LDO50_RS21710;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=LDO50_RS21710;old_locus_tag=BVI1335_420005 NZ_CAJZAO010000319.1 Protein Homology CDS 2692 3501 . - 0 ID=cds-WP_011885165.1;Parent=gene-LDO50_RS21710;Dbxref=GenBank:WP_011885165.1;Name=WP_011885165.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092038.1;locus_tag=LDO50_RS21710;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_011885165.1;transl_table=11 NZ_CAJZAO010000319.1 RefSeq gene 3569 4876 . - . ID=gene-LDO50_RS21715;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=LDO50_RS21715;old_locus_tag=BVI1335_420006 NZ_CAJZAO010000319.1 Protein Homology CDS 3569 4876 . - 0 ID=cds-WP_059568352.1;Parent=gene-LDO50_RS21715;Dbxref=GenBank:WP_059568352.1;Name=WP_059568352.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885164.1;locus_tag=LDO50_RS21715;product=lysophospholipid transporter LplT;protein_id=WP_059568352.1;transl_table=11 NZ_CAJZAO010000319.1 RefSeq gene 5095 6165 . + . ID=gene-LDO50_RS21720;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=LDO50_RS21720;old_locus_tag=BVI1335_420007 NZ_CAJZAO010000319.1 Protein Homology CDS 5095 6165 . + 0 ID=cds-WP_011885163.1;Parent=gene-LDO50_RS21720;Dbxref=GenBank:WP_011885163.1;Name=WP_011885163.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331722.1;locus_tag=LDO50_RS21720;product=alanine racemase;protein_id=WP_011885163.1;transl_table=11 NZ_CAJZAO010000319.1 RefSeq gene 6175 7551 . + . ID=gene-LDO50_RS21725;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=LDO50_RS21725;old_locus_tag=BVI1335_420008 NZ_CAJZAO010000319.1 Protein Homology CDS 6175 7551 . + 0 ID=cds-WP_011885162.1;Parent=gene-LDO50_RS21725;Dbxref=GenBank:WP_011885162.1;Name=WP_011885162.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026043.1;locus_tag=LDO50_RS21725;product=DNA repair protein RadA;protein_id=WP_011885162.1;transl_table=11 NZ_CAJZAO010000319.1 RefSeq gene 7690 7956 . + . ID=gene-LDO50_RS21730;Name=LDO50_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21730;old_locus_tag=BVI1335_420009 NZ_CAJZAO010000319.1 Protein Homology CDS 7690 7956 . + 0 ID=cds-WP_224020131.1;Parent=gene-LDO50_RS21730;Dbxref=GenBank:WP_224020131.1;Name=WP_224020131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759630.1;locus_tag=LDO50_RS21730;product=DUF2866 domain-containing protein;protein_id=WP_224020131.1;transl_table=11 NZ_CAJZAO010000319.1 RefSeq gene 8165 10093 . - . ID=gene-LDO50_RS21735;Name=LDO50_RS21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21735;old_locus_tag=BVI1335_420010 NZ_CAJZAO010000319.1 Protein Homology CDS 8165 10093 . - 0 ID=cds-WP_014723232.1;Parent=gene-LDO50_RS21735;Dbxref=GenBank:WP_014723232.1;Name=WP_014723232.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759629.1;locus_tag=LDO50_RS21735;product=ATP-binding cassette domain-containing protein;protein_id=WP_014723232.1;transl_table=11 NZ_CAJZAO010000319.1 RefSeq gene 10230 10709 . + . ID=gene-LDO50_RS21740;Name=LDO50_RS21740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21740;old_locus_tag=BVI1335_420011 NZ_CAJZAO010000319.1 Protein Homology CDS 10230 10709 . + 0 ID=cds-WP_014723231.1;Parent=gene-LDO50_RS21740;Dbxref=GenBank:WP_014723231.1;Name=WP_014723231.1;Ontology_term=GO:0004602,GO:0043295;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA,glutathione binding|0043295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904829.1;locus_tag=LDO50_RS21740;product=glutathione peroxidase;protein_id=WP_014723231.1;transl_table=11 NZ_CAJZAO010000319.1 RefSeq gene 10809 12260 . - . ID=gene-LDO50_RS21745;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=LDO50_RS21745;old_locus_tag=BVI1335_420012 NZ_CAJZAO010000319.1 Protein Homology CDS 10809 12260 . - 0 ID=cds-WP_034195305.1;Parent=gene-LDO50_RS21745;Dbxref=GenBank:WP_034195305.1;Name=WP_034195305.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885158.1;locus_tag=LDO50_RS21745;product=cardiolipin synthase;protein_id=WP_034195305.1;transl_table=11 NZ_CAJZAO010000319.1 RefSeq gene 12381 13289 . - . ID=gene-LDO50_RS21750;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=LDO50_RS21750;old_locus_tag=BVI1335_420013 NZ_CAJZAO010000319.1 Protein Homology CDS 12381 13289 . - 0 ID=cds-WP_034195306.1;Parent=gene-LDO50_RS21750;Dbxref=GenBank:WP_034195306.1;Name=WP_034195306.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764011.1;locus_tag=LDO50_RS21750;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_034195306.1;transl_table=11 NZ_CAJZAO010000319.1 RefSeq gene 13301 14440 . - . ID=gene-LDO50_RS21755;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=LDO50_RS21755;old_locus_tag=BVI1335_420014 NZ_CAJZAO010000319.1 Protein Homology CDS 13301 14440 . - 0 ID=cds-WP_014723228.1;Parent=gene-LDO50_RS21755;Dbxref=GenBank:WP_014723228.1;Name=WP_014723228.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493370.1;locus_tag=LDO50_RS21755;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_014723228.1;transl_table=11 NZ_CAJZAO010000319.1 RefSeq gene 14531 14899 . - . ID=gene-LDO50_RS21760;Name=LDO50_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21760;old_locus_tag=BVI1335_420015 NZ_CAJZAO010000319.1 Protein Homology CDS 14531 14899 . - 0 ID=cds-WP_011885155.1;Parent=gene-LDO50_RS21760;Dbxref=GenBank:WP_011885155.1;Name=WP_011885155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885155.1;locus_tag=LDO50_RS21760;product=ArsC family reductase;protein_id=WP_011885155.1;transl_table=11 NZ_CAJZAO010000319.1 RefSeq gene 14899 15726 . - . ID=gene-LDO50_RS21765;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=LDO50_RS21765;old_locus_tag=BVI1335_420016 NZ_CAJZAO010000319.1 Protein Homology CDS 14899 15726 . - 0 ID=cds-WP_006478479.1;Parent=gene-LDO50_RS21765;Dbxref=GenBank:WP_006478479.1;Name=WP_006478479.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007580558.1;locus_tag=LDO50_RS21765;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_006478479.1;transl_table=11 NZ_CAJZAO010000319.1 RefSeq gene 15772 17004 . - . ID=gene-LDO50_RS21770;Name=dapC;gbkey=Gene;gene=dapC;gene_biotype=protein_coding;locus_tag=LDO50_RS21770;old_locus_tag=BVI1335_420017 NZ_CAJZAO010000319.1 Protein Homology CDS 15772 17004 . - 0 ID=cds-WP_011885154.1;Parent=gene-LDO50_RS21770;Dbxref=GenBank:WP_011885154.1;Name=WP_011885154.1;Ontology_term=GO:0009089,GO:0009016;gbkey=CDS;gene=dapC;go_function=succinyldiaminopimelate transaminase activity|0009016||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402636.1;locus_tag=LDO50_RS21770;product=succinyldiaminopimelate transaminase;protein_id=WP_011885154.1;transl_table=11 NZ_CAJZAO010000319.1 RefSeq gene 17164 18105 . + . ID=gene-LDO50_RS21775;Name=LDO50_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21775;old_locus_tag=BVI1335_420018 NZ_CAJZAO010000319.1 Protein Homology CDS 17164 18105 . + 0 ID=cds-WP_014723226.1;Parent=gene-LDO50_RS21775;Dbxref=GenBank:WP_014723226.1;Name=WP_014723226.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364141.1;locus_tag=LDO50_RS21775;product=DMT family transporter;protein_id=WP_014723226.1;transl_table=11 NZ_CAJZAO010000319.1 RefSeq gene 18247 20281 . + . ID=gene-LDO50_RS31985;Name=smc;end_range=20281,.;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=LDO50_RS31985;old_locus_tag=BVI1335_420019;partial=true NZ_CAJZAO010000319.1 Protein Homology CDS 18247 20281 . + 0 ID=cds-WP_443797855.1;Parent=gene-LDO50_RS31985;Dbxref=GenBank:WP_443797855.1;Name=WP_443797855.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;end_range=20281,.;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009515848.1;locus_tag=LDO50_RS31985;partial=true;product=chromosome segregation protein SMC;protein_id=WP_443797855.1;transl_table=11 NZ_CAJZAO010000319.1 RefSeq gene 20292 21713 . + . ID=gene-LDO50_RS31990;Name=LDO50_RS31990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31990;old_locus_tag=BVI1335_420020;partial=true;start_range=.,20292 NZ_CAJZAO010000319.1 Protein Homology CDS 20292 21713 . + 0 ID=cds-WP_443797856.1;Parent=gene-LDO50_RS31990;Dbxref=GenBank:WP_443797856.1;Name=WP_443797856.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527298.1;locus_tag=LDO50_RS31990;partial=true;product=AAA family ATPase;protein_id=WP_443797856.1;start_range=.,20292;transl_table=11 NZ_CAJZAO010000319.1 RefSeq pseudogene 21799 22045 . + . ID=gene-LDO50_RS21785;Name=LDO50_RS21785;end_range=22045,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS21785;partial=true;pseudo=true NZ_CAJZAO010000319.1 Protein Homology CDS 21799 22045 . + 0 ID=cds-LDO50_RS21785;Parent=gene-LDO50_RS21785;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=22045,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402639.1;locus_tag=LDO50_RS21785;partial=true;product=cell division protein ZipA C-terminal FtsZ-binding domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000320.1 1 42998 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000320.1 RefSeq region 1 42998 . + . ID=NZ_CAJZAO010000320.1:1..42998;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_43 NZ_CAJZAO010000320.1 RefSeq pseudogene 186 879 . + . ID=gene-LDO50_RS21790;Name=pcaH;gbkey=Gene;gene=pcaH;gene_biotype=pseudogene;locus_tag=LDO50_RS21790;old_locus_tag=BVI1335_430001;pseudo=true NZ_CAJZAO010000320.1 Protein Homology CDS 186 879 . + 0 ID=cds-LDO50_RS21790;Parent=gene-LDO50_RS21790;Note=frameshifted;Ontology_term=GO:0046278,GO:0005506,GO:0018578;gbkey=CDS;gene=pcaH;go_function=iron ion binding|0005506||IEA,protocatechuate 3%2C4-dioxygenase activity|0018578||IEA;go_process=3%2C4-dihydroxybenzoate metabolic process|0046278||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725036.1;locus_tag=LDO50_RS21790;product=protocatechuate 3%2C4-dioxygenase subunit beta;pseudo=true;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 883 1476 . + . ID=gene-LDO50_RS21795;Name=pcaG;gbkey=Gene;gene=pcaG;gene_biotype=protein_coding;locus_tag=LDO50_RS21795;old_locus_tag=BVI1335_430003 NZ_CAJZAO010000320.1 Protein Homology CDS 883 1476 . + 0 ID=cds-WP_011882025.1;Parent=gene-LDO50_RS21795;Dbxref=GenBank:WP_011882025.1;Name=WP_011882025.1;Ontology_term=GO:0046278,GO:0005506,GO:0018578;gbkey=CDS;gene=pcaG;go_function=iron ion binding|0005506||IEA,protocatechuate 3%2C4-dioxygenase activity|0018578||IEA;go_process=3%2C4-dihydroxybenzoate metabolic process|0046278||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899603.1;locus_tag=LDO50_RS21795;product=protocatechuate 3%2C4-dioxygenase subunit alpha;protein_id=WP_011882025.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 1738 2181 . - . ID=gene-LDO50_RS21800;Name=LDO50_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21800 NZ_CAJZAO010000320.1 GeneMarkS-2+ CDS 1738 2181 . - 0 ID=cds-WP_162471375.1;Parent=gene-LDO50_RS21800;Dbxref=GenBank:WP_162471375.1;Name=WP_162471375.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS21800;product=hypothetical protein;protein_id=WP_162471375.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 2186 2998 . + . ID=gene-LDO50_RS21805;Name=bla;gbkey=Gene;gene=bla;gene_biotype=protein_coding;locus_tag=LDO50_RS21805;old_locus_tag=BVI1335_430005 NZ_CAJZAO010000320.1 Protein Homology CDS 2186 2998 . + 0 ID=cds-WP_059694381.1;Parent=gene-LDO50_RS21805;Dbxref=GenBank:WP_059694381.1;Name=WP_059694381.1;Ontology_term=GO:0030655,GO:0046677,GO:0008800;gbkey=CDS;gene=bla;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020071381.1;locus_tag=LDO50_RS21805;product=class A beta-lactamase;protein_id=WP_059694381.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 2995 4197 . + . ID=gene-LDO50_RS21810;Name=LDO50_RS21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21810;old_locus_tag=BVI1335_430006 NZ_CAJZAO010000320.1 Protein Homology CDS 2995 4197 . + 0 ID=cds-WP_059694383.1;Parent=gene-LDO50_RS21810;Dbxref=GenBank:WP_059694383.1;Name=WP_059694383.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725038.1;locus_tag=LDO50_RS21810;product=acyltransferase family protein;protein_id=WP_059694383.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 4625 5944 . + . ID=gene-LDO50_RS21815;Name=LDO50_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21815;old_locus_tag=BVI1335_430007 NZ_CAJZAO010000320.1 Protein Homology CDS 4625 5944 . + 0 ID=cds-WP_059474282.1;Parent=gene-LDO50_RS21815;Dbxref=GenBank:WP_059474282.1;Name=WP_059474282.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725040.1;locus_tag=LDO50_RS21815;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_059474282.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 5954 6796 . + . ID=gene-LDO50_RS21820;Name=LDO50_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21820;old_locus_tag=BVI1335_430008 NZ_CAJZAO010000320.1 Protein Homology CDS 5954 6796 . + 0 ID=cds-WP_011882021.1;Parent=gene-LDO50_RS21820;Dbxref=GenBank:WP_011882021.1;Name=WP_011882021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725041.1;locus_tag=LDO50_RS21820;product=VOC family protein;protein_id=WP_011882021.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 6868 7827 . - . ID=gene-LDO50_RS21825;Name=LDO50_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21825;old_locus_tag=BVI1335_430009 NZ_CAJZAO010000320.1 Protein Homology CDS 6868 7827 . - 0 ID=cds-WP_014725042.1;Parent=gene-LDO50_RS21825;Dbxref=GenBank:WP_014725042.1;Name=WP_014725042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882020.1;locus_tag=LDO50_RS21825;product=LysR family transcriptional regulator;protein_id=WP_014725042.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 7947 9158 . + . ID=gene-LDO50_RS21830;Name=LDO50_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21830;old_locus_tag=BVI1335_430010 NZ_CAJZAO010000320.1 Protein Homology CDS 7947 9158 . + 0 ID=cds-WP_011882019.1;Parent=gene-LDO50_RS21830;Dbxref=GenBank:WP_011882019.1;Name=WP_011882019.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725043.1;locus_tag=LDO50_RS21830;product=MFS transporter;protein_id=WP_011882019.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 9420 9848 . + . ID=gene-LDO50_RS21835;Name=LDO50_RS21835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21835;old_locus_tag=BVI1335_430011 NZ_CAJZAO010000320.1 Protein Homology CDS 9420 9848 . + 0 ID=cds-WP_059735705.1;Parent=gene-LDO50_RS21835;Dbxref=GenBank:WP_059735705.1;Name=WP_059735705.1;Ontology_term=GO:0030638;gbkey=CDS;go_process=polyketide metabolic process|0030638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882018.1;locus_tag=LDO50_RS21835;product=ester cyclase;protein_id=WP_059735705.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 9845 10297 . + . ID=gene-LDO50_RS21840;Name=LDO50_RS21840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21840;old_locus_tag=BVI1335_430012 NZ_CAJZAO010000320.1 Protein Homology CDS 9845 10297 . + 0 ID=cds-WP_059474280.1;Parent=gene-LDO50_RS21840;Dbxref=GenBank:WP_059474280.1;Name=WP_059474280.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882017.1;locus_tag=LDO50_RS21840;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_059474280.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 10891 12045 . + . ID=gene-LDO50_RS21845;Name=hpnI;gbkey=Gene;gene=hpnI;gene_biotype=protein_coding;locus_tag=LDO50_RS21845;old_locus_tag=BVI1335_430014 NZ_CAJZAO010000320.1 Protein Homology CDS 10891 12045 . + 0 ID=cds-WP_059462555.1;Parent=gene-LDO50_RS21845;Dbxref=GenBank:WP_059462555.1;Name=WP_059462555.1;Ontology_term=GO:0016757;gbkey=CDS;gene=hpnI;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725045.1;locus_tag=LDO50_RS21845;product=bacteriohopanetetrol glucosamine biosynthesis glycosyltransferase HpnI;protein_id=WP_059462555.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 12274 13248 . + . ID=gene-LDO50_RS21850;Name=LDO50_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21850;old_locus_tag=BVI1335_430015 NZ_CAJZAO010000320.1 Protein Homology CDS 12274 13248 . + 0 ID=cds-WP_059559496.1;Parent=gene-LDO50_RS21850;Dbxref=GenBank:WP_059559496.1;Name=WP_059559496.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF015651.6;locus_tag=LDO50_RS21850;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=WP_059559496.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 13646 13876 . - . ID=gene-LDO50_RS21855;Name=LDO50_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21855;old_locus_tag=BVI1335_430016 NZ_CAJZAO010000320.1 Protein Homology CDS 13646 13876 . - 0 ID=cds-WP_146125903.1;Parent=gene-LDO50_RS21855;Dbxref=GenBank:WP_146125903.1;Name=WP_146125903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017775810.1;locus_tag=LDO50_RS21855;product=hypothetical protein;protein_id=WP_146125903.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 14292 15053 . - . ID=gene-LDO50_RS21860;Name=LDO50_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21860;old_locus_tag=BVI1335_430017 NZ_CAJZAO010000320.1 Protein Homology CDS 14292 15053 . - 0 ID=cds-WP_175984411.1;Parent=gene-LDO50_RS21860;Dbxref=GenBank:WP_175984411.1;Name=WP_175984411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403789.1;locus_tag=LDO50_RS21860;product=hypothetical protein;protein_id=WP_175984411.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 15207 15986 . - . ID=gene-LDO50_RS21865;Name=LDO50_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21865;old_locus_tag=BVI1335_430018 NZ_CAJZAO010000320.1 Protein Homology CDS 15207 15986 . - 0 ID=cds-WP_059461107.1;Parent=gene-LDO50_RS21865;Dbxref=GenBank:WP_059461107.1;Name=WP_059461107.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882012.1;locus_tag=LDO50_RS21865;product=AraC family transcriptional regulator;protein_id=WP_059461107.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 16129 16899 . + . ID=gene-LDO50_RS21870;Name=LDO50_RS21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21870;old_locus_tag=BVI1335_430019 NZ_CAJZAO010000320.1 Protein Homology CDS 16129 16899 . + 0 ID=cds-WP_045578087.1;Parent=gene-LDO50_RS21870;Dbxref=GenBank:WP_045578087.1;Name=WP_045578087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882011.1;locus_tag=LDO50_RS21870;product=alpha/beta fold hydrolase;protein_id=WP_045578087.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 16935 17762 . - . ID=gene-LDO50_RS21875;Name=LDO50_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21875;old_locus_tag=BVI1335_430020 NZ_CAJZAO010000320.1 Protein Homology CDS 16935 17762 . - 0 ID=cds-WP_059694390.1;Parent=gene-LDO50_RS21875;Dbxref=GenBank:WP_059694390.1;Name=WP_059694390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495030.1;locus_tag=LDO50_RS21875;product=M55 family metallopeptidase;protein_id=WP_059694390.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 17759 18859 . - . ID=gene-LDO50_RS21880;Name=LDO50_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21880;old_locus_tag=BVI1335_430021 NZ_CAJZAO010000320.1 Protein Homology CDS 17759 18859 . - 0 ID=cds-WP_059888403.1;Parent=gene-LDO50_RS21880;Dbxref=GenBank:WP_059888403.1;Name=WP_059888403.1;Ontology_term=GO:0006508,GO:0004177;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882009.1;locus_tag=LDO50_RS21880;product=DmpA family aminopeptidase;protein_id=WP_059888403.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 18859 19752 . - . ID=gene-LDO50_RS21885;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=LDO50_RS21885;old_locus_tag=BVI1335_430022 NZ_CAJZAO010000320.1 Protein Homology CDS 18859 19752 . - 0 ID=cds-WP_011882008.1;Parent=gene-LDO50_RS21885;Dbxref=GenBank:WP_011882008.1;Name=WP_011882008.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765762.1;locus_tag=LDO50_RS21885;product=glutathione ABC transporter permease GsiD;protein_id=WP_011882008.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 19760 20680 . - . ID=gene-LDO50_RS21890;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=LDO50_RS21890;old_locus_tag=BVI1335_430023 NZ_CAJZAO010000320.1 Protein Homology CDS 19760 20680 . - 0 ID=cds-WP_011882007.1;Parent=gene-LDO50_RS21890;Dbxref=GenBank:WP_011882007.1;Name=WP_011882007.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765761.1;locus_tag=LDO50_RS21890;product=glutathione ABC transporter permease GsiC;protein_id=WP_011882007.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 20757 22319 . - . ID=gene-LDO50_RS21895;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=LDO50_RS21895;old_locus_tag=BVI1335_430024 NZ_CAJZAO010000320.1 Protein Homology CDS 20757 22319 . - 0 ID=cds-WP_011882006.1;Parent=gene-LDO50_RS21895;Dbxref=GenBank:WP_011882006.1;Name=WP_011882006.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603960.1;locus_tag=LDO50_RS21895;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_011882006.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 22485 24467 . - . ID=gene-LDO50_RS21900;Name=LDO50_RS21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21900;old_locus_tag=BVI1335_430025 NZ_CAJZAO010000320.1 Protein Homology CDS 22485 24467 . - 0 ID=cds-WP_176154750.1;Parent=gene-LDO50_RS21900;Dbxref=GenBank:WP_176154750.1;Name=WP_176154750.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495033.1;locus_tag=LDO50_RS21900;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_176154750.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 24496 25482 . - . ID=gene-LDO50_RS21905;Name=LDO50_RS21905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21905;old_locus_tag=BVI1335_430026 NZ_CAJZAO010000320.1 Protein Homology CDS 24496 25482 . - 0 ID=cds-WP_224020132.1;Parent=gene-LDO50_RS21905;Dbxref=GenBank:WP_224020132.1;Name=WP_224020132.1;Ontology_term=GO:0006508,GO:0004067,GO:0008798;gbkey=CDS;go_function=asparaginase activity|0004067||IEA,beta-aspartyl-peptidase activity|0008798||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482631.1;locus_tag=LDO50_RS21905;product=isoaspartyl peptidase/L-asparaginase family protein;protein_id=WP_224020132.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 25479 26423 . - . ID=gene-LDO50_RS21910;Name=LDO50_RS21910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21910;old_locus_tag=BVI1335_430027 NZ_CAJZAO010000320.1 Protein Homology CDS 25479 26423 . - 0 ID=cds-WP_011882003.1;Parent=gene-LDO50_RS21910;Dbxref=GenBank:WP_011882003.1;Name=WP_011882003.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482638.1;locus_tag=LDO50_RS21910;product=MurR/RpiR family transcriptional regulator;protein_id=WP_011882003.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 26903 31831 . - . ID=gene-LDO50_RS21915;Name=LDO50_RS21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21915;old_locus_tag=BVI1335_430029 NZ_CAJZAO010000320.1 Protein Homology CDS 26903 31831 . - 0 ID=cds-WP_175994242.1;Parent=gene-LDO50_RS21915;Dbxref=GenBank:WP_175994242.1;Name=WP_175994242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882002.1;locus_tag=LDO50_RS21915;product=autotransporter-associated beta strand repeat-containing protein;protein_id=WP_175994242.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 32500 32811 . + . ID=gene-LDO50_RS21920;Name=LDO50_RS21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21920;old_locus_tag=BVI1335_430030 NZ_CAJZAO010000320.1 Protein Homology CDS 32500 32811 . + 0 ID=cds-WP_175994243.1;Parent=gene-LDO50_RS21920;Dbxref=GenBank:WP_175994243.1;Name=WP_175994243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882001.1;locus_tag=LDO50_RS21920;product=hypothetical protein;protein_id=WP_175994243.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 33066 33914 . - . ID=gene-LDO50_RS21925;Name=LDO50_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21925;old_locus_tag=BVI1335_430032 NZ_CAJZAO010000320.1 Protein Homology CDS 33066 33914 . - 0 ID=cds-WP_224020133.1;Parent=gene-LDO50_RS21925;Dbxref=GenBank:WP_224020133.1;Name=WP_224020133.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547910.1;locus_tag=LDO50_RS21925;product=class I SAM-dependent methyltransferase;protein_id=WP_224020133.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 34061 35521 . + . ID=gene-LDO50_RS21930;Name=LDO50_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21930;old_locus_tag=BVI1335_430033 NZ_CAJZAO010000320.1 Protein Homology CDS 34061 35521 . + 0 ID=cds-WP_045578092.1;Parent=gene-LDO50_RS21930;Dbxref=GenBank:WP_045578092.1;Name=WP_045578092.1;Ontology_term=GO:0016787,GO:0042578,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488720.1;locus_tag=LDO50_RS21930;product=metallophosphoesterase family protein;protein_id=WP_045578092.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 35686 37023 . + . ID=gene-LDO50_RS21935;Name=LDO50_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21935;old_locus_tag=BVI1335_430034 NZ_CAJZAO010000320.1 Protein Homology CDS 35686 37023 . + 0 ID=cds-WP_224020134.1;Parent=gene-LDO50_RS21935;Dbxref=GenBank:WP_224020134.1;Name=WP_224020134.1;Ontology_term=GO:0004130,GO:0016491,GO:0020037;gbkey=CDS;go_function=cytochrome-c peroxidase activity|0004130||IEA,oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725061.1;locus_tag=LDO50_RS21935;product=cytochrome-c peroxidase;protein_id=WP_224020134.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 37493 37792 . + . ID=gene-LDO50_RS21940;Name=LDO50_RS21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21940;old_locus_tag=BVI1335_430035 NZ_CAJZAO010000320.1 Protein Homology CDS 37493 37792 . + 0 ID=cds-WP_011881997.1;Parent=gene-LDO50_RS21940;Dbxref=GenBank:WP_011881997.1;Name=WP_011881997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881997.1;locus_tag=LDO50_RS21940;product=hypothetical protein;protein_id=WP_011881997.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 37934 39418 . - . ID=gene-LDO50_RS21945;Name=LDO50_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21945;old_locus_tag=BVI1335_430036 NZ_CAJZAO010000320.1 Protein Homology CDS 37934 39418 . - 0 ID=cds-WP_085954507.1;Parent=gene-LDO50_RS21945;Dbxref=GenBank:WP_085954507.1;Name=WP_085954507.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495045.1;locus_tag=LDO50_RS21945;product=aminotransferase-like domain-containing protein;protein_id=WP_085954507.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 39622 39972 . + . ID=gene-LDO50_RS21950;Name=LDO50_RS21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21950;old_locus_tag=BVI1335_430037 NZ_CAJZAO010000320.1 Protein Homology CDS 39622 39972 . + 0 ID=cds-WP_011881995.1;Parent=gene-LDO50_RS21950;Dbxref=GenBank:WP_011881995.1;Name=WP_011881995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658579.1;locus_tag=LDO50_RS21950;product=hypothetical protein;protein_id=WP_011881995.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 40162 40581 . - . ID=gene-LDO50_RS21955;Name=LDO50_RS21955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21955;old_locus_tag=BVI1335_430038 NZ_CAJZAO010000320.1 Protein Homology CDS 40162 40581 . - 0 ID=cds-WP_011881994.1;Parent=gene-LDO50_RS21955;Dbxref=GenBank:WP_011881994.1;Name=WP_011881994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725064.1;locus_tag=LDO50_RS21955;product=DUF6691 family protein;protein_id=WP_011881994.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 40583 41017 . - . ID=gene-LDO50_RS21960;Name=LDO50_RS21960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21960;old_locus_tag=BVI1335_430039 NZ_CAJZAO010000320.1 Protein Homology CDS 40583 41017 . - 0 ID=cds-WP_011881993.1;Parent=gene-LDO50_RS21960;Dbxref=GenBank:WP_011881993.1;Name=WP_011881993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751220.1;locus_tag=LDO50_RS21960;product=YeeE/YedE family protein;protein_id=WP_011881993.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 41007 41357 . - . ID=gene-LDO50_RS21965;Name=LDO50_RS21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21965;old_locus_tag=BVI1335_430040 NZ_CAJZAO010000320.1 Protein Homology CDS 41007 41357 . - 0 ID=cds-WP_011881992.1;Parent=gene-LDO50_RS21965;Dbxref=GenBank:WP_011881992.1;Name=WP_011881992.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881992.1;locus_tag=LDO50_RS21965;product=ArsR/SmtB family transcription factor;protein_id=WP_011881992.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 41527 42768 . - . ID=gene-LDO50_RS21970;Name=LDO50_RS21970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21970;old_locus_tag=BVI1335_430041 NZ_CAJZAO010000320.1 Protein Homology CDS 41527 42768 . - 0 ID=cds-WP_443797857.1;Parent=gene-LDO50_RS21970;Dbxref=GenBank:WP_443797857.1;Name=WP_443797857.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881991.1;locus_tag=LDO50_RS21970;product=FAD-dependent oxidoreductase;protein_id=WP_443797857.1;transl_table=11 NZ_CAJZAO010000320.1 RefSeq gene 42817 42998 . - . ID=gene-LDO50_RS21975;Name=LDO50_RS21975;end_range=42998,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21975;partial=true NZ_CAJZAO010000320.1 Protein Homology CDS 42817 42998 . - 2 ID=cds-WP_224020135.1;Parent=gene-LDO50_RS21975;Dbxref=GenBank:WP_224020135.1;Name=WP_224020135.1;end_range=42998,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028982.1;locus_tag=LDO50_RS21975;partial=true;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_224020135.1;transl_table=11 ##sequence-region NZ_CAJZAO010000321.1 1 13573 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000321.1 RefSeq region 1 13573 . + . ID=NZ_CAJZAO010000321.1:1..13573;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_44 NZ_CAJZAO010000321.1 RefSeq pseudogene 1 196 . - . ID=gene-LDO50_RS31995;Name=LDO50_RS31995;end_range=196,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31995;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000321.1 Protein Homology CDS 1 196 . - 1 ID=cds-LDO50_RS31995;Parent=gene-LDO50_RS31995;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=196,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751572.1;locus_tag=LDO50_RS31995;partial=true;product=transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000321.1 RefSeq gene 207 1424 . - . ID=gene-LDO50_RS21980;Name=LDO50_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21980;old_locus_tag=BVI1335_440002;partial=true;start_range=.,207 NZ_CAJZAO010000321.1 Protein Homology CDS 207 1424 . - 0 ID=cds-WP_443797858.1;Parent=gene-LDO50_RS21980;Dbxref=GenBank:WP_443797858.1;Name=WP_443797858.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726109.1;locus_tag=LDO50_RS21980;partial=true;product=ATP-binding protein;protein_id=WP_443797858.1;start_range=.,207;transl_table=11 NZ_CAJZAO010000321.1 RefSeq gene 1828 2748 . + . ID=gene-LDO50_RS21985;Name=LDO50_RS21985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21985;old_locus_tag=BVI1335_440004 NZ_CAJZAO010000321.1 Protein Homology CDS 1828 2748 . + 0 ID=cds-WP_011880448.1;Parent=gene-LDO50_RS21985;Dbxref=GenBank:WP_011880448.1;Name=WP_011880448.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498483.1;locus_tag=LDO50_RS21985;product=helix-turn-helix domain-containing protein;protein_id=WP_011880448.1;transl_table=11 NZ_CAJZAO010000321.1 RefSeq gene 3050 3955 . + . ID=gene-LDO50_RS21990;Name=LDO50_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21990;old_locus_tag=BVI1335_440006 NZ_CAJZAO010000321.1 Protein Homology CDS 3050 3955 . + 0 ID=cds-WP_011880449.1;Parent=gene-LDO50_RS21990;Dbxref=GenBank:WP_011880449.1;Name=WP_011880449.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726112.1;locus_tag=LDO50_RS21990;product=LysR family transcriptional regulator;protein_id=WP_011880449.1;transl_table=11 NZ_CAJZAO010000321.1 RefSeq gene 3990 5474 . - . ID=gene-LDO50_RS21995;Name=LDO50_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS21995;old_locus_tag=BVI1335_440007 NZ_CAJZAO010000321.1 Protein Homology CDS 3990 5474 . - 0 ID=cds-WP_011880450.1;Parent=gene-LDO50_RS21995;Dbxref=GenBank:WP_011880450.1;Name=WP_011880450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337468.1;locus_tag=LDO50_RS21995;product=alginate export family protein;protein_id=WP_011880450.1;transl_table=11 NZ_CAJZAO010000321.1 RefSeq gene 5489 6442 . - . ID=gene-LDO50_RS22000;Name=LDO50_RS22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22000;old_locus_tag=BVI1335_440008 NZ_CAJZAO010000321.1 Protein Homology CDS 5489 6442 . - 0 ID=cds-WP_011880451.1;Parent=gene-LDO50_RS22000;Dbxref=GenBank:WP_011880451.1;Name=WP_011880451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337467.1;locus_tag=LDO50_RS22000;product=lactoylglutathione lyase;protein_id=WP_011880451.1;transl_table=11 NZ_CAJZAO010000321.1 RefSeq gene 6498 7235 . - . ID=gene-LDO50_RS22005;Name=LDO50_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22005;old_locus_tag=BVI1335_440009 NZ_CAJZAO010000321.1 Protein Homology CDS 6498 7235 . - 0 ID=cds-WP_043292692.1;Parent=gene-LDO50_RS22005;Dbxref=GenBank:WP_043292692.1;Name=WP_043292692.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726114.1;locus_tag=LDO50_RS22005;product=YoaK family protein;protein_id=WP_043292692.1;transl_table=11 NZ_CAJZAO010000321.1 RefSeq gene 7217 7423 . - . ID=gene-LDO50_RS22010;Name=LDO50_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22010;old_locus_tag=BVI1335_440010 NZ_CAJZAO010000321.1 Protein Homology CDS 7217 7423 . - 0 ID=cds-WP_043292820.1;Parent=gene-LDO50_RS22010;Dbxref=GenBank:WP_043292820.1;Name=WP_043292820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726115.1;locus_tag=LDO50_RS22010;product=hypothetical protein;protein_id=WP_043292820.1;transl_table=11 NZ_CAJZAO010000321.1 RefSeq gene 7616 8365 . + . ID=gene-LDO50_RS22015;Name=LDO50_RS22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22015;old_locus_tag=BVI1335_440011 NZ_CAJZAO010000321.1 Protein Homology CDS 7616 8365 . + 0 ID=cds-WP_011880454.1;Parent=gene-LDO50_RS22015;Dbxref=GenBank:WP_011880454.1;Name=WP_011880454.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726116.1;locus_tag=LDO50_RS22015;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011880454.1;transl_table=11 NZ_CAJZAO010000321.1 RefSeq gene 8511 9653 . + . ID=gene-LDO50_RS22020;Name=LDO50_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22020;old_locus_tag=BVI1335_440012 NZ_CAJZAO010000321.1 Protein Homology CDS 8511 9653 . + 0 ID=cds-WP_011880455.1;Parent=gene-LDO50_RS22020;Dbxref=GenBank:WP_011880455.1;Name=WP_011880455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337459.1;locus_tag=LDO50_RS22020;product=FAD binding domain-containing protein;protein_id=WP_011880455.1;transl_table=11 NZ_CAJZAO010000321.1 RefSeq gene 9581 9886 . - . ID=gene-LDO50_RS22025;Name=LDO50_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22025;old_locus_tag=BVI1335_440013 NZ_CAJZAO010000321.1 Protein Homology CDS 9581 9886 . - 0 ID=cds-WP_043292693.1;Parent=gene-LDO50_RS22025;Dbxref=GenBank:WP_043292693.1;Name=WP_043292693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493778.1;locus_tag=LDO50_RS22025;product=hypothetical protein;protein_id=WP_043292693.1;transl_table=11 NZ_CAJZAO010000321.1 RefSeq gene 9883 10164 . - . ID=gene-LDO50_RS22030;Name=LDO50_RS22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22030;old_locus_tag=BVI1335_440014 NZ_CAJZAO010000321.1 Protein Homology CDS 9883 10164 . - 0 ID=cds-WP_011880456.1;Parent=gene-LDO50_RS22030;Dbxref=GenBank:WP_011880456.1;Name=WP_011880456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880456.1;locus_tag=LDO50_RS22030;product=DUF4148 domain-containing protein;protein_id=WP_011880456.1;transl_table=11 NZ_CAJZAO010000321.1 RefSeq gene 10436 13573 . + . ID=gene-LDO50_RS22035;Name=LDO50_RS22035;end_range=13573,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22035;partial=true NZ_CAJZAO010000321.1 Protein Homology CDS 10436 13573 . + 0 ID=cds-WP_224020136.1;Parent=gene-LDO50_RS22035;Dbxref=GenBank:WP_224020136.1;Name=WP_224020136.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;end_range=13573,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545696.1;locus_tag=LDO50_RS22035;partial=true;product=efflux RND transporter permease subunit;protein_id=WP_224020136.1;transl_table=11 ##sequence-region NZ_CAJZAO010000322.1 1 57081 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000322.1 RefSeq region 1 57081 . + . ID=NZ_CAJZAO010000322.1:1..57081;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_45 NZ_CAJZAO010000322.1 RefSeq gene 63 1685 . + . ID=gene-LDO50_RS22040;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=LDO50_RS22040;old_locus_tag=BVI1335_450001 NZ_CAJZAO010000322.1 Protein Homology CDS 63 1685 . + 0 ID=cds-WP_034195347.1;Parent=gene-LDO50_RS22040;Dbxref=GenBank:WP_034195347.1;Name=WP_034195347.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332014.1;locus_tag=LDO50_RS22040;product=glucose-6-phosphate isomerase;protein_id=WP_034195347.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 1744 2457 . - . ID=gene-LDO50_RS22045;Name=LDO50_RS22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22045;old_locus_tag=BVI1335_450002 NZ_CAJZAO010000322.1 Protein Homology CDS 1744 2457 . - 0 ID=cds-WP_045579003.1;Parent=gene-LDO50_RS22045;Dbxref=GenBank:WP_045579003.1;Name=WP_045579003.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549613.1;locus_tag=LDO50_RS22045;product=ABC transporter ATP-binding protein;protein_id=WP_045579003.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 2456 3133 . + . ID=gene-LDO50_RS22050;Name=LDO50_RS22050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22050;old_locus_tag=BVI1335_450003 NZ_CAJZAO010000322.1 Protein Homology CDS 2456 3133 . + 0 ID=cds-WP_034195345.1;Parent=gene-LDO50_RS22050;Dbxref=GenBank:WP_034195345.1;Name=WP_034195345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489343.1;locus_tag=LDO50_RS22050;product=arylesterase;protein_id=WP_034195345.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 3292 5226 . - . ID=gene-LDO50_RS22055;Name=LDO50_RS22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22055;old_locus_tag=BVI1335_450004 NZ_CAJZAO010000322.1 Protein Homology CDS 3292 5226 . - 0 ID=cds-WP_224020137.1;Parent=gene-LDO50_RS22055;Dbxref=GenBank:WP_224020137.1;Name=WP_224020137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554314.1;locus_tag=LDO50_RS22055;product=SurA N-terminal domain-containing protein;protein_id=WP_224020137.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 5352 5428 . - . ID=gene-LDO50_RS22060;Name=LDO50_RS22060;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS22060;old_locus_tag=BVI1335_TRNA42 NZ_CAJZAO010000322.1 tRNAscan-SE tRNA 5352 5428 . - . ID=rna-LDO50_RS22060;Parent=gene-LDO50_RS22060;anticodon=(pos:complement(5392..5394));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS22060;product=tRNA-Asp NZ_CAJZAO010000322.1 tRNAscan-SE exon 5352 5428 . - . ID=exon-LDO50_RS22060-1;Parent=rna-LDO50_RS22060;anticodon=(pos:complement(5392..5394));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS22060;product=tRNA-Asp NZ_CAJZAO010000322.1 RefSeq gene 5452 5527 . - . ID=gene-LDO50_RS22065;Name=LDO50_RS22065;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS22065;old_locus_tag=BVI1335_TRNA41 NZ_CAJZAO010000322.1 tRNAscan-SE tRNA 5452 5527 . - . ID=rna-LDO50_RS22065;Parent=gene-LDO50_RS22065;anticodon=(pos:complement(5492..5494));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS22065;product=tRNA-Val NZ_CAJZAO010000322.1 tRNAscan-SE exon 5452 5527 . - . ID=exon-LDO50_RS22065-1;Parent=rna-LDO50_RS22065;anticodon=(pos:complement(5492..5494));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS22065;product=tRNA-Val NZ_CAJZAO010000322.1 RefSeq gene 5733 8156 . - . ID=gene-LDO50_RS22070;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=LDO50_RS22070;old_locus_tag=BVI1335_450006 NZ_CAJZAO010000322.1 Protein Homology CDS 5733 8156 . - 0 ID=cds-WP_011885075.1;Parent=gene-LDO50_RS22070;Dbxref=GenBank:WP_011885075.1;Name=WP_011885075.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007585905.1;locus_tag=LDO50_RS22070;product=endopeptidase La;protein_id=WP_011885075.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 8354 9625 . - . ID=gene-LDO50_RS22075;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=LDO50_RS22075;old_locus_tag=BVI1335_450007 NZ_CAJZAO010000322.1 Protein Homology CDS 8354 9625 . - 0 ID=cds-WP_011885076.1;Parent=gene-LDO50_RS22075;Dbxref=GenBank:WP_011885076.1;Name=WP_011885076.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521258.1;locus_tag=LDO50_RS22075;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_011885076.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 9787 10440 . - . ID=gene-LDO50_RS22080;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=LDO50_RS22080;old_locus_tag=BVI1335_450008 NZ_CAJZAO010000322.1 Protein Homology CDS 9787 10440 . - 0 ID=cds-WP_011885077.1;Parent=gene-LDO50_RS22080;Dbxref=GenBank:WP_011885077.1;Name=WP_011885077.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026149.1;locus_tag=LDO50_RS22080;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_011885077.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 10581 11927 . - . ID=gene-LDO50_RS22085;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=LDO50_RS22085;old_locus_tag=BVI1335_450009 NZ_CAJZAO010000322.1 Protein Homology CDS 10581 11927 . - 0 ID=cds-WP_011885078.1;Parent=gene-LDO50_RS22085;Dbxref=GenBank:WP_011885078.1;Name=WP_011885078.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004539679.1;locus_tag=LDO50_RS22085;product=trigger factor;protein_id=WP_011885078.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 12353 13498 . + . ID=gene-LDO50_RS22090;Name=LDO50_RS22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22090;old_locus_tag=BVI1335_450010 NZ_CAJZAO010000322.1 Protein Homology CDS 12353 13498 . + 0 ID=cds-WP_034195342.1;Parent=gene-LDO50_RS22090;Dbxref=GenBank:WP_034195342.1;Name=WP_034195342.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364080.1;locus_tag=LDO50_RS22090;product=glycerate kinase;protein_id=WP_034195342.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 13561 14013 . + . ID=gene-LDO50_RS22095;Name=LDO50_RS22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22095;old_locus_tag=BVI1335_450011 NZ_CAJZAO010000322.1 Protein Homology CDS 13561 14013 . + 0 ID=cds-WP_034195341.1;Parent=gene-LDO50_RS22095;Dbxref=GenBank:WP_034195341.1;Name=WP_034195341.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478574.1;locus_tag=LDO50_RS22095;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_034195341.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 14236 15234 . - . ID=gene-LDO50_RS22100;Name=LDO50_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22100;old_locus_tag=BVI1335_450012 NZ_CAJZAO010000322.1 Protein Homology CDS 14236 15234 . - 0 ID=cds-WP_014723171.1;Parent=gene-LDO50_RS22100;Dbxref=GenBank:WP_014723171.1;Name=WP_014723171.1;Ontology_term=GO:0015940,GO:0008677,GO:0050661;gbkey=CDS;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA,NADP binding|0050661||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213186.1;locus_tag=LDO50_RS22100;product=2-dehydropantoate 2-reductase;protein_id=WP_014723171.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 15587 15817 . + . ID=gene-LDO50_RS22105;Name=LDO50_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22105;old_locus_tag=BVI1335_450013 NZ_CAJZAO010000322.1 Protein Homology CDS 15587 15817 . + 0 ID=cds-WP_014723172.1;Parent=gene-LDO50_RS22105;Dbxref=GenBank:WP_014723172.1;Name=WP_014723172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402226.1;locus_tag=LDO50_RS22105;product=hypothetical protein;protein_id=WP_014723172.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 16052 16237 . + . ID=gene-LDO50_RS22110;Name=LDO50_RS22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22110 NZ_CAJZAO010000322.1 GeneMarkS-2+ CDS 16052 16237 . + 0 ID=cds-WP_060081548.1;Parent=gene-LDO50_RS22110;Dbxref=GenBank:WP_060081548.1;Name=WP_060081548.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS22110;product=hypothetical protein;protein_id=WP_060081548.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 16247 16954 . + . ID=gene-LDO50_RS22115;Name=LDO50_RS22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22115;old_locus_tag=BVI1335_450014 NZ_CAJZAO010000322.1 Protein Homology CDS 16247 16954 . + 0 ID=cds-WP_196484608.1;Parent=gene-LDO50_RS22115;Dbxref=GenBank:WP_196484608.1;Name=WP_196484608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017776710.1;locus_tag=LDO50_RS22115;product=hypothetical protein;protein_id=WP_196484608.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq pseudogene 16884 17077 . + . ID=gene-LDO50_RS22120;Name=LDO50_RS22120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS22120;partial=true;pseudo=true;start_range=.,16884 NZ_CAJZAO010000322.1 Protein Homology CDS 16884 17077 . + 0 ID=cds-LDO50_RS22120;Parent=gene-LDO50_RS22120;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611734.1;locus_tag=LDO50_RS22120;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,16884;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 17849 18085 . + . ID=gene-LDO50_RS22125;Name=LDO50_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22125;old_locus_tag=BVI1335_450016 NZ_CAJZAO010000322.1 Protein Homology CDS 17849 18085 . + 0 ID=cds-WP_034195338.1;Parent=gene-LDO50_RS22125;Dbxref=GenBank:WP_034195338.1;Name=WP_034195338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661270.1;locus_tag=LDO50_RS22125;product=hypothetical protein;protein_id=WP_034195338.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 18159 18356 . + . ID=gene-LDO50_RS22130;Name=LDO50_RS22130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22130;old_locus_tag=BVI1335_450017 NZ_CAJZAO010000322.1 Protein Homology CDS 18159 18356 . + 0 ID=cds-WP_014723174.1;Parent=gene-LDO50_RS22130;Dbxref=GenBank:WP_014723174.1;Name=WP_014723174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328164.1;locus_tag=LDO50_RS22130;product=hypothetical protein;protein_id=WP_014723174.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 18376 18591 . - . ID=gene-LDO50_RS22135;Name=LDO50_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22135;old_locus_tag=BVI1335_450018 NZ_CAJZAO010000322.1 GeneMarkS-2+ CDS 18376 18591 . - 0 ID=cds-WP_124259635.1;Parent=gene-LDO50_RS22135;Dbxref=GenBank:WP_124259635.1;Name=WP_124259635.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS22135;product=hypothetical protein;protein_id=WP_124259635.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 18689 18952 . - . ID=gene-LDO50_RS22140;Name=LDO50_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22140;old_locus_tag=BVI1335_450019 NZ_CAJZAO010000322.1 GeneMarkS-2+ CDS 18689 18952 . - 0 ID=cds-WP_041493845.1;Parent=gene-LDO50_RS22140;Dbxref=GenBank:WP_041493845.1;Name=WP_041493845.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS22140;product=hypothetical protein;protein_id=WP_041493845.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 18984 20159 . - . ID=gene-LDO50_RS22145;Name=LDO50_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22145;old_locus_tag=BVI1335_450020 NZ_CAJZAO010000322.1 Protein Homology CDS 18984 20159 . - 0 ID=cds-WP_224020138.1;Parent=gene-LDO50_RS22145;Dbxref=GenBank:WP_224020138.1;Name=WP_224020138.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723175.1;locus_tag=LDO50_RS22145;product=tyrosine-type recombinase/integrase;protein_id=WP_224020138.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 20332 20418 . - . ID=gene-LDO50_RS22150;Name=LDO50_RS22150;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS22150;old_locus_tag=BVI1335_TRNA40 NZ_CAJZAO010000322.1 tRNAscan-SE tRNA 20332 20418 . - . ID=rna-LDO50_RS22150;Parent=gene-LDO50_RS22150;anticodon=(pos:complement(20382..20384));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS22150;product=tRNA-Leu NZ_CAJZAO010000322.1 tRNAscan-SE exon 20332 20418 . - . ID=exon-LDO50_RS22150-1;Parent=rna-LDO50_RS22150;anticodon=(pos:complement(20382..20384));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS22150;product=tRNA-Leu NZ_CAJZAO010000322.1 RefSeq gene 20660 21493 . + . ID=gene-LDO50_RS22155;Name=hpnD;gbkey=Gene;gene=hpnD;gene_biotype=protein_coding;locus_tag=LDO50_RS22155;old_locus_tag=BVI1335_450022 NZ_CAJZAO010000322.1 Protein Homology CDS 20660 21493 . + 0 ID=cds-WP_014723176.1;Parent=gene-LDO50_RS22155;Dbxref=GenBank:WP_014723176.1;Name=WP_014723176.1;Ontology_term=GO:0016117,GO:0046905;gbkey=CDS;gene=hpnD;go_function=15-cis-phytoene synthase activity|0046905||IEA;go_process=carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723176.1;locus_tag=LDO50_RS22155;product=presqualene diphosphate synthase HpnD;protein_id=WP_014723176.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 21504 22712 . - . ID=gene-LDO50_RS22160;Name=LDO50_RS22160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22160;old_locus_tag=BVI1335_450023 NZ_CAJZAO010000322.1 Protein Homology CDS 21504 22712 . - 0 ID=cds-WP_011885084.1;Parent=gene-LDO50_RS22160;Dbxref=GenBank:WP_011885084.1;Name=WP_011885084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752035.1;locus_tag=LDO50_RS22160;product=DUF1501 domain-containing protein;protein_id=WP_011885084.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 22780 24282 . - . ID=gene-LDO50_RS22165;Name=LDO50_RS22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22165;old_locus_tag=BVI1335_450024 NZ_CAJZAO010000322.1 Protein Homology CDS 22780 24282 . - 0 ID=cds-WP_059474458.1;Parent=gene-LDO50_RS22165;Dbxref=GenBank:WP_059474458.1;Name=WP_059474458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549599.1;locus_tag=LDO50_RS22165;product=DUF1800 domain-containing protein;protein_id=WP_059474458.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 24403 24681 . - . ID=gene-LDO50_RS22170;Name=LDO50_RS22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22170;old_locus_tag=BVI1335_450025 NZ_CAJZAO010000322.1 Protein Homology CDS 24403 24681 . - 0 ID=cds-WP_014723178.1;Parent=gene-LDO50_RS22170;Dbxref=GenBank:WP_014723178.1;Name=WP_014723178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352385.1;locus_tag=LDO50_RS22170;product=hypothetical protein;protein_id=WP_014723178.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 24939 25673 . + . ID=gene-LDO50_RS22175;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=LDO50_RS22175;old_locus_tag=BVI1335_450026 NZ_CAJZAO010000322.1 Protein Homology CDS 24939 25673 . + 0 ID=cds-WP_004192636.1;Parent=gene-LDO50_RS22175;Dbxref=GenBank:WP_004192636.1;Name=WP_004192636.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009517537.1;locus_tag=LDO50_RS22175;product=osmolarity response regulator transcription factor OmpR;protein_id=WP_004192636.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 25714 27075 . + . ID=gene-LDO50_RS22180;Name=LDO50_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22180;old_locus_tag=BVI1335_450027 NZ_CAJZAO010000322.1 Protein Homology CDS 25714 27075 . + 0 ID=cds-WP_045578996.1;Parent=gene-LDO50_RS22180;Dbxref=GenBank:WP_045578996.1;Name=WP_045578996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364087.1;locus_tag=LDO50_RS22180;product=ATP-binding protein;protein_id=WP_045578996.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 27265 27813 . + . ID=gene-LDO50_RS22185;Name=LDO50_RS22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22185;old_locus_tag=BVI1335_450029 NZ_CAJZAO010000322.1 Protein Homology CDS 27265 27813 . + 0 ID=cds-WP_045578995.1;Parent=gene-LDO50_RS22185;Dbxref=GenBank:WP_045578995.1;Name=WP_045578995.1;Ontology_term=GO:0008379;gbkey=CDS;go_function=thioredoxin peroxidase activity|0008379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192241.1;locus_tag=LDO50_RS22185;product=peroxiredoxin;protein_id=WP_045578995.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 27890 28417 . + . ID=gene-LDO50_RS22190;Name=LDO50_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22190;old_locus_tag=BVI1335_450030 NZ_CAJZAO010000322.1 Protein Homology CDS 27890 28417 . + 0 ID=cds-WP_011885089.1;Parent=gene-LDO50_RS22190;Dbxref=GenBank:WP_011885089.1;Name=WP_011885089.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760961.1;locus_tag=LDO50_RS22190;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_011885089.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 28550 29026 . - . ID=gene-LDO50_RS22195;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=LDO50_RS22195;old_locus_tag=BVI1335_450031 NZ_CAJZAO010000322.1 Protein Homology CDS 28550 29026 . - 0 ID=cds-WP_011885090.1;Parent=gene-LDO50_RS22195;Dbxref=GenBank:WP_011885090.1;Name=WP_011885090.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723181.1;locus_tag=LDO50_RS22195;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_011885090.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 29055 29765 . - . ID=gene-LDO50_RS22200;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=LDO50_RS22200;old_locus_tag=BVI1335_450032 NZ_CAJZAO010000322.1 Protein Homology CDS 29055 29765 . - 0 ID=cds-WP_011885091.1;Parent=gene-LDO50_RS22200;Dbxref=GenBank:WP_011885091.1;Name=WP_011885091.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402218.1;locus_tag=LDO50_RS22200;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_011885091.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 29874 33329 . + . ID=gene-LDO50_RS22205;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=LDO50_RS22205;old_locus_tag=BVI1335_450034 NZ_CAJZAO010000322.1 Protein Homology CDS 29874 33329 . + 0 ID=cds-WP_014723183.1;Parent=gene-LDO50_RS22205;Dbxref=GenBank:WP_014723183.1;Name=WP_014723183.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415640.1;locus_tag=LDO50_RS22205;product=transcription-repair coupling factor;protein_id=WP_014723183.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 33455 34675 . + . ID=gene-LDO50_RS22210;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=LDO50_RS22210;old_locus_tag=BVI1335_450033 NZ_CAJZAO010000322.1 Protein Homology CDS 33455 34675 . + 0 ID=cds-WP_011885093.1;Parent=gene-LDO50_RS22210;Dbxref=GenBank:WP_011885093.1;Name=WP_011885093.1;Ontology_term=GO:0006526,GO:0006592,GO:0008777;gbkey=CDS;gene=argE;go_function=acetylornithine deacetylase activity|0008777||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896786.1;locus_tag=LDO50_RS22210;product=acetylornithine deacetylase;protein_id=WP_011885093.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 34732 35751 . + . ID=gene-LDO50_RS22215;Name=LDO50_RS22215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22215;old_locus_tag=BVI1335_450035 NZ_CAJZAO010000322.1 Protein Homology CDS 34732 35751 . + 0 ID=cds-WP_014723184.1;Parent=gene-LDO50_RS22215;Dbxref=GenBank:WP_014723184.1;Name=WP_014723184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213175.1;locus_tag=LDO50_RS22215;product=threonine/serine dehydratase;protein_id=WP_014723184.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 36154 38679 . - . ID=gene-LDO50_RS22220;Name=LDO50_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22220;old_locus_tag=BVI1335_450036 NZ_CAJZAO010000322.1 Protein Homology CDS 36154 38679 . - 0 ID=cds-WP_059474459.1;Parent=gene-LDO50_RS22220;Dbxref=GenBank:WP_059474459.1;Name=WP_059474459.1;Ontology_term=GO:0006508,GO:0009252,GO:0008658,GO:0008955,GO:0009002;gbkey=CDS;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415646.1;locus_tag=LDO50_RS22220;product=penicillin-binding protein 1A;protein_id=WP_059474459.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 39118 39798 . + . ID=gene-LDO50_RS22225;Name=LDO50_RS22225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22225;old_locus_tag=BVI1335_450037 NZ_CAJZAO010000322.1 Protein Homology CDS 39118 39798 . + 0 ID=cds-WP_011885096.1;Parent=gene-LDO50_RS22225;Dbxref=GenBank:WP_011885096.1;Name=WP_011885096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193810.1;locus_tag=LDO50_RS22225;product=PspA/IM30 family protein;protein_id=WP_011885096.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 39875 41047 . + . ID=gene-LDO50_RS22230;Name=LDO50_RS22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22230;old_locus_tag=BVI1335_450038 NZ_CAJZAO010000322.1 Protein Homology CDS 39875 41047 . + 0 ID=cds-WP_043291709.1;Parent=gene-LDO50_RS22230;Dbxref=GenBank:WP_043291709.1;Name=WP_043291709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467640.1;locus_tag=LDO50_RS22230;product=tetratricopeptide repeat protein;protein_id=WP_043291709.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 41272 41703 . + . ID=gene-LDO50_RS22235;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=LDO50_RS22235;old_locus_tag=BVI1335_450039 NZ_CAJZAO010000322.1 Protein Homology CDS 41272 41703 . + 0 ID=cds-WP_011885098.1;Parent=gene-LDO50_RS22235;Dbxref=GenBank:WP_011885098.1;Name=WP_011885098.1;Ontology_term=GO:0034220,GO:0008381,GO:0016020;gbkey=CDS;gene=mscL;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487991.1;locus_tag=LDO50_RS22235;product=large conductance mechanosensitive channel protein MscL;protein_id=WP_011885098.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 42046 42492 . + . ID=gene-LDO50_RS22240;Name=LDO50_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22240;old_locus_tag=BVI1335_450040 NZ_CAJZAO010000322.1 Protein Homology CDS 42046 42492 . + 0 ID=cds-WP_014723190.1;Parent=gene-LDO50_RS22240;Dbxref=GenBank:WP_014723190.1;Name=WP_014723190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331909.1;locus_tag=LDO50_RS22240;product=hypothetical protein;protein_id=WP_014723190.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 42567 43460 . - . ID=gene-LDO50_RS22245;Name=LDO50_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22245;old_locus_tag=BVI1335_450041 NZ_CAJZAO010000322.1 Protein Homology CDS 42567 43460 . - 0 ID=cds-WP_069264930.1;Parent=gene-LDO50_RS22245;Dbxref=GenBank:WP_069264930.1;Name=WP_069264930.1;Ontology_term=GO:0016491,GO:0050661,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723191.1;locus_tag=LDO50_RS22245;product=NAD(P)-dependent oxidoreductase;protein_id=WP_069264930.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 43582 43791 . + . ID=gene-LDO50_RS22250;Name=LDO50_RS22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22250;old_locus_tag=BVI1335_450043 NZ_CAJZAO010000322.1 Protein Homology CDS 43582 43791 . + 0 ID=cds-WP_006755984.1;Parent=gene-LDO50_RS22250;Dbxref=GenBank:WP_006755984.1;Name=WP_006755984.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890522.1;locus_tag=LDO50_RS22250;product=dodecin;protein_id=WP_006755984.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 44007 44936 . + . ID=gene-LDO50_RS22255;Name=LDO50_RS22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22255;old_locus_tag=BVI1335_450042 NZ_CAJZAO010000322.1 Protein Homology CDS 44007 44936 . + 0 ID=cds-WP_011885102.1;Parent=gene-LDO50_RS22255;Dbxref=GenBank:WP_011885102.1;Name=WP_011885102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698381.1;locus_tag=LDO50_RS22255;product=LysR substrate-binding domain-containing protein;protein_id=WP_011885102.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 44999 46411 . - . ID=gene-LDO50_RS22260;Name=LDO50_RS22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22260;old_locus_tag=BVI1335_450044 NZ_CAJZAO010000322.1 Protein Homology CDS 44999 46411 . - 0 ID=cds-WP_059474496.1;Parent=gene-LDO50_RS22260;Dbxref=GenBank:WP_059474496.1;Name=WP_059474496.1;Ontology_term=GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754392.1;locus_tag=LDO50_RS22260;product=8-oxoguanine deaminase;protein_id=WP_059474496.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 46921 47274 . + . ID=gene-LDO50_RS22265;Name=uraH;gbkey=Gene;gene=uraH;gene_biotype=protein_coding;locus_tag=LDO50_RS22265;old_locus_tag=BVI1335_450045 NZ_CAJZAO010000322.1 Protein Homology CDS 46921 47274 . + 0 ID=cds-WP_046426965.1;Parent=gene-LDO50_RS22265;Dbxref=GenBank:WP_046426965.1;Name=WP_046426965.1;Ontology_term=GO:0006144,GO:0033971;gbkey=CDS;gene=uraH;go_function=hydroxyisourate hydrolase activity|0033971||IEA;go_process=purine nucleobase metabolic process|0006144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495593.1;locus_tag=LDO50_RS22265;product=hydroxyisourate hydrolase;protein_id=WP_046426965.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 47328 48521 . + . ID=gene-LDO50_RS22270;Name=LDO50_RS22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22270;old_locus_tag=BVI1335_450046 NZ_CAJZAO010000322.1 Protein Homology CDS 47328 48521 . + 0 ID=cds-WP_175999896.1;Parent=gene-LDO50_RS22270;Dbxref=GenBank:WP_175999896.1;Name=WP_175999896.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521221.1;locus_tag=LDO50_RS22270;product=urate hydroxylase PuuD;protein_id=WP_175999896.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 49103 49300 . - . ID=gene-LDO50_RS22275;Name=LDO50_RS22275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22275;old_locus_tag=BVI1335_450047 NZ_CAJZAO010000322.1 GeneMarkS-2+ CDS 49103 49300 . - 0 ID=cds-WP_034195327.1;Parent=gene-LDO50_RS22275;Dbxref=GenBank:WP_034195327.1;Name=WP_034195327.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS22275;product=hypothetical protein;protein_id=WP_034195327.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 49360 49872 . - . ID=gene-LDO50_RS22280;Name=LDO50_RS22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22280;old_locus_tag=BVI1335_450048 NZ_CAJZAO010000322.1 Protein Homology CDS 49360 49872 . - 0 ID=cds-WP_059474461.1;Parent=gene-LDO50_RS22280;Dbxref=GenBank:WP_059474461.1;Name=WP_059474461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885106.1;locus_tag=LDO50_RS22280;product=ureidoglycolate lyase;protein_id=WP_059474461.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 49869 50882 . - . ID=gene-LDO50_RS22285;Name=alc;gbkey=Gene;gene=alc;gene_biotype=protein_coding;locus_tag=LDO50_RS22285;old_locus_tag=BVI1335_450049 NZ_CAJZAO010000322.1 Protein Homology CDS 49869 50882 . - 0 ID=cds-WP_046426991.1;Parent=gene-LDO50_RS22285;Dbxref=GenBank:WP_046426991.1;Name=WP_046426991.1;Ontology_term=GO:0000256,GO:0004037;gbkey=CDS;gene=alc;go_function=allantoicase activity|0004037||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909169.1;locus_tag=LDO50_RS22285;product=allantoicase;protein_id=WP_046426991.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 50929 51450 . - . ID=gene-LDO50_RS22290;Name=uraD;gbkey=Gene;gene=uraD;gene_biotype=protein_coding;locus_tag=LDO50_RS22290;old_locus_tag=BVI1335_450050 NZ_CAJZAO010000322.1 Protein Homology CDS 50929 51450 . - 0 ID=cds-WP_045578989.1;Parent=gene-LDO50_RS22290;Dbxref=GenBank:WP_045578989.1;Name=WP_045578989.1;Ontology_term=GO:0000255;gbkey=CDS;gene=uraD;go_process=allantoin metabolic process|0000255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364104.1;locus_tag=LDO50_RS22290;product=2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase;protein_id=WP_045578989.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 51447 52400 . - . ID=gene-LDO50_RS22295;Name=puuE;gbkey=Gene;gene=puuE;gene_biotype=protein_coding;locus_tag=LDO50_RS22295;old_locus_tag=BVI1335_450051 NZ_CAJZAO010000322.1 Protein Homology CDS 51447 52400 . - 0 ID=cds-WP_043291112.1;Parent=gene-LDO50_RS22295;Dbxref=GenBank:WP_043291112.1;Name=WP_043291112.1;Ontology_term=GO:0000256,GO:0016810;gbkey=CDS;gene=puuE;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407670.1;locus_tag=LDO50_RS22295;product=allantoinase PuuE;protein_id=WP_043291112.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 52551 53387 . - . ID=gene-LDO50_RS22300;Name=LDO50_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22300;old_locus_tag=BVI1335_450052 NZ_CAJZAO010000322.1 Protein Homology CDS 52551 53387 . - 0 ID=cds-WP_034195324.1;Parent=gene-LDO50_RS22300;Dbxref=GenBank:WP_034195324.1;Name=WP_034195324.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885110.1;locus_tag=LDO50_RS22300;product=aspartate/glutamate racemase family protein;protein_id=WP_034195324.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 53398 54882 . - . ID=gene-LDO50_RS22305;Name=LDO50_RS22305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22305;old_locus_tag=BVI1335_450053 NZ_CAJZAO010000322.1 Protein Homology CDS 53398 54882 . - 0 ID=cds-WP_014723198.1;Parent=gene-LDO50_RS22305;Dbxref=GenBank:WP_014723198.1;Name=WP_014723198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549579.1;locus_tag=LDO50_RS22305;product=NCS1 family nucleobase:cation symporter-1;protein_id=WP_014723198.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 55032 55736 . - . ID=gene-LDO50_RS22310;Name=LDO50_RS22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22310;old_locus_tag=BVI1335_450054 NZ_CAJZAO010000322.1 Protein Homology CDS 55032 55736 . - 0 ID=cds-WP_011885112.1;Parent=gene-LDO50_RS22310;Dbxref=GenBank:WP_011885112.1;Name=WP_011885112.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364108.1;locus_tag=LDO50_RS22310;product=GntR family transcriptional regulator;protein_id=WP_011885112.1;transl_table=11 NZ_CAJZAO010000322.1 RefSeq gene 56045 56983 . - . ID=gene-LDO50_RS22315;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=LDO50_RS22315;old_locus_tag=BVI1335_450056 NZ_CAJZAO010000322.1 Protein Homology CDS 56045 56983 . - 0 ID=cds-WP_011885113.1;Parent=gene-LDO50_RS22315;Dbxref=GenBank:WP_011885113.1;Name=WP_011885113.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549577.1;locus_tag=LDO50_RS22315;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_011885113.1;transl_table=11 ##sequence-region NZ_CAJZAO010000323.1 1 9665 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000323.1 RefSeq region 1 9665 . + . ID=NZ_CAJZAO010000323.1:1..9665;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_46 NZ_CAJZAO010000323.1 RefSeq pseudogene 1 145 . + . ID=gene-LDO50_RS22320;Name=LDO50_RS22320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS22320;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000323.1 Protein Homology CDS 1 145 . + 1 ID=cds-LDO50_RS22320;Parent=gene-LDO50_RS22320;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723313.1;locus_tag=LDO50_RS22320;partial=true;product=HutD family protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000323.1 RefSeq gene 150 1373 . + . ID=gene-LDO50_RS22325;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=LDO50_RS22325;old_locus_tag=BVI1335_460001 NZ_CAJZAO010000323.1 Protein Homology CDS 150 1373 . + 0 ID=cds-WP_060043243.1;Parent=gene-LDO50_RS22325;Dbxref=GenBank:WP_060043243.1;Name=WP_060043243.1;Ontology_term=GO:0019556,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488078.1;locus_tag=LDO50_RS22325;product=imidazolonepropionase;protein_id=WP_060043243.1;transl_table=11 NZ_CAJZAO010000323.1 RefSeq gene 1397 2773 . + . ID=gene-LDO50_RS22330;Name=LDO50_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22330;old_locus_tag=BVI1335_460002 NZ_CAJZAO010000323.1 Protein Homology CDS 1397 2773 . + 0 ID=cds-WP_060121412.1;Parent=gene-LDO50_RS22330;Dbxref=GenBank:WP_060121412.1;Name=WP_060121412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488097.1;locus_tag=LDO50_RS22330;product=formimidoylglutamate deiminase;protein_id=WP_060121412.1;transl_table=11 NZ_CAJZAO010000323.1 RefSeq gene 2832 3632 . + . ID=gene-LDO50_RS22335;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=LDO50_RS22335;old_locus_tag=BVI1335_460003 NZ_CAJZAO010000323.1 Protein Homology CDS 2832 3632 . + 0 ID=cds-WP_059561119.1;Parent=gene-LDO50_RS22335;Dbxref=GenBank:WP_059561119.1;Name=WP_059561119.1;Ontology_term=GO:0019557,GO:0050129;gbkey=CDS;gene=hutG;go_function=N-formylglutamate deformylase activity|0050129||IEA;go_process=L-histidine catabolic process to glutamate and formate|0019557||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885447.1;locus_tag=LDO50_RS22335;product=N-formylglutamate deformylase;protein_id=WP_059561119.1;transl_table=11 NZ_CAJZAO010000323.1 RefSeq gene 3905 4129 . + . ID=gene-LDO50_RS22340;Name=LDO50_RS22340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22340 NZ_CAJZAO010000323.1 Protein Homology CDS 3905 4129 . + 0 ID=cds-WP_080938748.1;Parent=gene-LDO50_RS22340;Dbxref=GenBank:WP_080938748.1;Name=WP_080938748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763905.1;locus_tag=LDO50_RS22340;product=hypothetical protein;protein_id=WP_080938748.1;transl_table=11 NZ_CAJZAO010000323.1 RefSeq gene 4280 5116 . + . ID=gene-LDO50_RS22345;Name=LDO50_RS22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22345;old_locus_tag=BVI1335_460005 NZ_CAJZAO010000323.1 Protein Homology CDS 4280 5116 . + 0 ID=cds-WP_176322199.1;Parent=gene-LDO50_RS22345;Dbxref=GenBank:WP_176322199.1;Name=WP_176322199.1;Ontology_term=GO:0016787,GO:0016811;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723308.1;locus_tag=LDO50_RS22345;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_176322199.1;transl_table=11 NZ_CAJZAO010000323.1 RefSeq gene 5129 6466 . + . ID=gene-LDO50_RS22350;Name=LDO50_RS22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22350;old_locus_tag=BVI1335_460006 NZ_CAJZAO010000323.1 Protein Homology CDS 5129 6466 . + 0 ID=cds-WP_034194568.1;Parent=gene-LDO50_RS22350;Dbxref=GenBank:WP_034194568.1;Name=WP_034194568.1;Ontology_term=GO:0006542,GO:0004356,GO:0005524,GO:0046872;gbkey=CDS;go_function=glutamine synthetase activity|0004356||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657410.1;locus_tag=LDO50_RS22350;product=glutamine synthetase family protein;protein_id=WP_034194568.1;transl_table=11 NZ_CAJZAO010000323.1 RefSeq gene 6956 7032 . + . ID=gene-LDO50_RS22355;Name=LDO50_RS22355;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS22355;old_locus_tag=BVI1335_TRNA4 NZ_CAJZAO010000323.1 tRNAscan-SE tRNA 6956 7032 . + . ID=rna-LDO50_RS22355;Parent=gene-LDO50_RS22355;anticodon=(pos:6990..6992);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS22355;product=tRNA-Met NZ_CAJZAO010000323.1 tRNAscan-SE exon 6956 7032 . + . ID=exon-LDO50_RS22355-1;Parent=rna-LDO50_RS22355;anticodon=(pos:6990..6992);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS22355;product=tRNA-Met NZ_CAJZAO010000323.1 RefSeq gene 7523 7597 . - . ID=gene-LDO50_RS22360;Name=LDO50_RS22360;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS22360;old_locus_tag=BVI1335_TRNA39 NZ_CAJZAO010000323.1 tRNAscan-SE tRNA 7523 7597 . - . ID=rna-LDO50_RS22360;Parent=gene-LDO50_RS22360;anticodon=(pos:complement(7563..7565));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS22360;product=tRNA-Val NZ_CAJZAO010000323.1 tRNAscan-SE exon 7523 7597 . - . ID=exon-LDO50_RS22360-1;Parent=rna-LDO50_RS22360;anticodon=(pos:complement(7563..7565));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS22360;product=tRNA-Val NZ_CAJZAO010000323.1 RefSeq gene 7796 8071 . - . ID=gene-LDO50_RS22365;Name=LDO50_RS22365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22365;old_locus_tag=BVI1335_460009 NZ_CAJZAO010000323.1 Protein Homology CDS 7796 8071 . - 0 ID=cds-WP_006478357.1;Parent=gene-LDO50_RS22365;Dbxref=GenBank:WP_006478357.1;Name=WP_006478357.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401987.1;locus_tag=LDO50_RS22365;product=oxidative damage protection protein;protein_id=WP_006478357.1;transl_table=11 NZ_CAJZAO010000323.1 RefSeq gene 8122 9501 . - . ID=gene-LDO50_RS22370;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=LDO50_RS22370;old_locus_tag=BVI1335_460010 NZ_CAJZAO010000323.1 Protein Homology CDS 8122 9501 . - 0 ID=cds-WP_014723300.1;Parent=gene-LDO50_RS22370;Dbxref=GenBank:WP_014723300.1;Name=WP_014723300.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602335.1;locus_tag=LDO50_RS22370;product=amino-acid N-acetyltransferase;protein_id=WP_014723300.1;transl_table=11 ##sequence-region NZ_CAJZAO010000324.1 1 25643 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000324.1 RefSeq region 1 25643 . + . ID=NZ_CAJZAO010000324.1:1..25643;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_47 NZ_CAJZAO010000324.1 RefSeq gene 1 138 . - . ID=gene-LDO50_RS32000;Name=LDO50_RS32000;end_range=138,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS32000;partial=true;start_range=.,1 NZ_CAJZAO010000324.1 Protein Homology CDS 1 138 . - 2 ID=cds-WP_443797861.1;Parent=gene-LDO50_RS32000;Dbxref=GenBank:WP_443797861.1;Name=WP_443797861.1;Ontology_term=GO:0009058,GO:0030170;end_range=138,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF012382.6;locus_tag=LDO50_RS32000;partial=true;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_443797861.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000324.1 RefSeq gene 149 679 . - . ID=gene-LDO50_RS32005;Name=LDO50_RS32005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS32005;old_locus_tag=BVI1335_470002;partial=true;start_range=.,149 NZ_CAJZAO010000324.1 Protein Homology CDS 149 679 . - 0 ID=cds-WP_443797860.1;Parent=gene-LDO50_RS32005;Dbxref=GenBank:WP_443797860.1;Name=WP_443797860.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF012382.6;locus_tag=LDO50_RS32005;partial=true;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_443797860.1;start_range=.,149;transl_table=11 NZ_CAJZAO010000324.1 RefSeq gene 733 1762 . - . ID=gene-LDO50_RS22380;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=LDO50_RS22380;old_locus_tag=BVI1335_470003;partial=true;start_range=.,733 NZ_CAJZAO010000324.1 Protein Homology CDS 733 1762 . - 0 ID=cds-WP_224020140.1;Parent=gene-LDO50_RS22380;Dbxref=GenBank:WP_224020140.1;Name=WP_224020140.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009970014.1;locus_tag=LDO50_RS22380;partial=true;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_224020140.1;start_range=.,733;transl_table=11 NZ_CAJZAO010000324.1 RefSeq gene 2194 3471 . - . ID=gene-LDO50_RS22385;Name=LDO50_RS22385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22385;old_locus_tag=BVI1335_470004 NZ_CAJZAO010000324.1 Protein Homology CDS 2194 3471 . - 0 ID=cds-WP_011886178.1;Parent=gene-LDO50_RS22385;Dbxref=GenBank:WP_011886178.1;Name=WP_011886178.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477650.1;locus_tag=LDO50_RS22385;product=dienelactone hydrolase family protein;protein_id=WP_011886178.1;transl_table=11 NZ_CAJZAO010000324.1 RefSeq gene 3579 4016 . - . ID=gene-LDO50_RS22390;Name=LDO50_RS22390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22390;old_locus_tag=BVI1335_470005 NZ_CAJZAO010000324.1 Protein Homology CDS 3579 4016 . - 0 ID=cds-WP_011886177.1;Parent=gene-LDO50_RS22390;Dbxref=GenBank:WP_011886177.1;Name=WP_011886177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495438.1;locus_tag=LDO50_RS22390;product=YchJ family protein;protein_id=WP_011886177.1;transl_table=11 NZ_CAJZAO010000324.1 RefSeq gene 4056 4733 . - . ID=gene-LDO50_RS22395;Name=LDO50_RS22395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22395;old_locus_tag=BVI1335_470006 NZ_CAJZAO010000324.1 Protein Homology CDS 4056 4733 . - 0 ID=cds-WP_011886176.1;Parent=gene-LDO50_RS22395;Dbxref=GenBank:WP_011886176.1;Name=WP_011886176.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895885.1;locus_tag=LDO50_RS22395;product=SDR family oxidoreductase;protein_id=WP_011886176.1;transl_table=11 NZ_CAJZAO010000324.1 RefSeq gene 4816 5583 . - . ID=gene-LDO50_RS22400;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=LDO50_RS22400;old_locus_tag=BVI1335_470007 NZ_CAJZAO010000324.1 Protein Homology CDS 4816 5583 . - 0 ID=cds-WP_011886175.1;Parent=gene-LDO50_RS22400;Dbxref=GenBank:WP_011886175.1;Name=WP_011886175.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493618.1;locus_tag=LDO50_RS22400;product=carbonate dehydratase;protein_id=WP_011886175.1;transl_table=11 NZ_CAJZAO010000324.1 RefSeq gene 5650 7470 . - . ID=gene-LDO50_RS22405;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=LDO50_RS22405;old_locus_tag=BVI1335_470008 NZ_CAJZAO010000324.1 Protein Homology CDS 5650 7470 . - 0 ID=cds-WP_059461190.1;Parent=gene-LDO50_RS22405;Dbxref=GenBank:WP_059461190.1;Name=WP_059461190.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407100.1;locus_tag=LDO50_RS22405;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_059461190.1;transl_table=11 NZ_CAJZAO010000324.1 RefSeq gene 7886 8965 . + . ID=gene-LDO50_RS22410;Name=LDO50_RS22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22410;old_locus_tag=BVI1335_470009 NZ_CAJZAO010000324.1 Protein Homology CDS 7886 8965 . + 0 ID=cds-WP_014723748.1;Parent=gene-LDO50_RS22410;Dbxref=GenBank:WP_014723748.1;Name=WP_014723748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407098.1;locus_tag=LDO50_RS22410;product=MBL fold metallo-hydrolase;protein_id=WP_014723748.1;transl_table=11 NZ_CAJZAO010000324.1 RefSeq gene 9294 10889 . - . ID=gene-LDO50_RS22415;Name=LDO50_RS22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22415;old_locus_tag=BVI1335_470010 NZ_CAJZAO010000324.1 Protein Homology CDS 9294 10889 . - 0 ID=cds-WP_059461191.1;Parent=gene-LDO50_RS22415;Dbxref=GenBank:WP_059461191.1;Name=WP_059461191.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895890.1;locus_tag=LDO50_RS22415;product=ABC transporter substrate-binding protein;protein_id=WP_059461191.1;transl_table=11 NZ_CAJZAO010000324.1 RefSeq gene 11502 12275 . - . ID=gene-LDO50_RS22420;Name=LDO50_RS22420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22420;old_locus_tag=BVI1335_470011 NZ_CAJZAO010000324.1 Protein Homology CDS 11502 12275 . - 0 ID=cds-WP_011886170.1;Parent=gene-LDO50_RS22420;Dbxref=GenBank:WP_011886170.1;Name=WP_011886170.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886170.1;locus_tag=LDO50_RS22420;product=SDR family oxidoreductase;protein_id=WP_011886170.1;transl_table=11 NZ_CAJZAO010000324.1 RefSeq gene 12295 12933 . - . ID=gene-LDO50_RS22425;Name=LDO50_RS22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22425;old_locus_tag=BVI1335_470012 NZ_CAJZAO010000324.1 Protein Homology CDS 12295 12933 . - 0 ID=cds-WP_011886169.1;Parent=gene-LDO50_RS22425;Dbxref=GenBank:WP_011886169.1;Name=WP_011886169.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190112.1;locus_tag=LDO50_RS22425;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_011886169.1;transl_table=11 NZ_CAJZAO010000324.1 RefSeq gene 13000 13905 . - . ID=gene-LDO50_RS22430;Name=LDO50_RS22430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22430;old_locus_tag=BVI1335_470013 NZ_CAJZAO010000324.1 Protein Homology CDS 13000 13905 . - 0 ID=cds-WP_011886168.1;Parent=gene-LDO50_RS22430;Dbxref=GenBank:WP_011886168.1;Name=WP_011886168.1;Ontology_term=GO:0042834,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750888.1;locus_tag=LDO50_RS22430;product=SPOR domain-containing protein;protein_id=WP_011886168.1;transl_table=11 NZ_CAJZAO010000324.1 RefSeq gene 14005 15786 . - . ID=gene-LDO50_RS22435;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=LDO50_RS22435;old_locus_tag=BVI1335_470014 NZ_CAJZAO010000324.1 Protein Homology CDS 14005 15786 . - 0 ID=cds-WP_014723744.1;Parent=gene-LDO50_RS22435;Dbxref=GenBank:WP_014723744.1;Name=WP_014723744.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522947.1;locus_tag=LDO50_RS22435;product=arginine--tRNA ligase;protein_id=WP_014723744.1;transl_table=11 NZ_CAJZAO010000324.1 RefSeq gene 15988 16311 . + . ID=gene-LDO50_RS22440;Name=LDO50_RS22440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22440;old_locus_tag=BVI1335_470016 NZ_CAJZAO010000324.1 Protein Homology CDS 15988 16311 . + 0 ID=cds-WP_011886166.1;Parent=gene-LDO50_RS22440;Dbxref=GenBank:WP_011886166.1;Name=WP_011886166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334383.1;locus_tag=LDO50_RS22440;product=DUF1840 domain-containing protein;protein_id=WP_011886166.1;transl_table=11 NZ_CAJZAO010000324.1 RefSeq gene 16457 19174 . - . ID=gene-LDO50_RS22445;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=LDO50_RS22445;old_locus_tag=BVI1335_470017 NZ_CAJZAO010000324.1 Protein Homology CDS 16457 19174 . - 0 ID=cds-WP_011886165.1;Parent=gene-LDO50_RS22445;Dbxref=GenBank:WP_011886165.1;Name=WP_011886165.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009918375.1;locus_tag=LDO50_RS22445;product=methionine synthase;protein_id=WP_011886165.1;transl_table=11 NZ_CAJZAO010000324.1 RefSeq gene 19221 20288 . - . ID=gene-LDO50_RS22450;Name=LDO50_RS22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22450;old_locus_tag=BVI1335_470018 NZ_CAJZAO010000324.1 Protein Homology CDS 19221 20288 . - 0 ID=cds-WP_014723742.1;Parent=gene-LDO50_RS22450;Dbxref=GenBank:WP_014723742.1;Name=WP_014723742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658053.1;locus_tag=LDO50_RS22450;product=homocysteine S-methyltransferase family protein;protein_id=WP_014723742.1;transl_table=11 NZ_CAJZAO010000324.1 RefSeq gene 20514 20771 . - . ID=gene-LDO50_RS22455;Name=LDO50_RS22455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22455;old_locus_tag=BVI1335_470019 NZ_CAJZAO010000324.1 Protein Homology CDS 20514 20771 . - 0 ID=cds-WP_006477667.1;Parent=gene-LDO50_RS22455;Dbxref=GenBank:WP_006477667.1;Name=WP_006477667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398119.1;locus_tag=LDO50_RS22455;product=BTH_I0359 family protein;protein_id=WP_006477667.1;transl_table=11 NZ_CAJZAO010000324.1 RefSeq gene 21017 22336 . - . ID=gene-LDO50_RS22460;Name=LDO50_RS22460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22460;old_locus_tag=BVI1335_470021 NZ_CAJZAO010000324.1 Protein Homology CDS 21017 22336 . - 0 ID=cds-WP_224020139.1;Parent=gene-LDO50_RS22460;Dbxref=GenBank:WP_224020139.1;Name=WP_224020139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886163.1;locus_tag=LDO50_RS22460;product=DUF3108 domain-containing protein;protein_id=WP_224020139.1;transl_table=11 NZ_CAJZAO010000324.1 RefSeq gene 22454 23329 . - . ID=gene-LDO50_RS22465;Name=LDO50_RS22465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22465;old_locus_tag=BVI1335_470022 NZ_CAJZAO010000324.1 Protein Homology CDS 22454 23329 . - 0 ID=cds-WP_045578740.1;Parent=gene-LDO50_RS22465;Dbxref=GenBank:WP_045578740.1;Name=WP_045578740.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212625.1;locus_tag=LDO50_RS22465;product=IclR family transcriptional regulator;protein_id=WP_045578740.1;transl_table=11 NZ_CAJZAO010000324.1 RefSeq gene 23455 24447 . + . ID=gene-LDO50_RS22470;Name=LDO50_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22470;old_locus_tag=BVI1335_470023 NZ_CAJZAO010000324.1 Protein Homology CDS 23455 24447 . + 0 ID=cds-WP_014723739.1;Parent=gene-LDO50_RS22470;Dbxref=GenBank:WP_014723739.1;Name=WP_014723739.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189282.1;locus_tag=LDO50_RS22470;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_014723739.1;transl_table=11 NZ_CAJZAO010000324.1 RefSeq gene 24585 25412 . + . ID=gene-LDO50_RS22475;Name=LDO50_RS22475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22475;old_locus_tag=BVI1335_470024 NZ_CAJZAO010000324.1 Protein Homology CDS 24585 25412 . + 0 ID=cds-WP_059475387.1;Parent=gene-LDO50_RS22475;Dbxref=GenBank:WP_059475387.1;Name=WP_059475387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895900.1;locus_tag=LDO50_RS22475;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_059475387.1;transl_table=11 NZ_CAJZAO010000324.1 RefSeq pseudogene 25489 25643 . + . ID=gene-LDO50_RS22480;Name=LDO50_RS22480;end_range=25643,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS22480;partial=true;pseudo=true NZ_CAJZAO010000324.1 Protein Homology CDS 25489 25643 . + 0 ID=cds-LDO50_RS22480;Parent=gene-LDO50_RS22480;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=25643,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407086.1;locus_tag=LDO50_RS22480;partial=true;product=PhaM family polyhydroxyalkanoate granule multifunctional regulatory protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000325.1 1 6792 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000325.1 RefSeq region 1 6792 . + . ID=NZ_CAJZAO010000325.1:1..6792;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_48 NZ_CAJZAO010000325.1 RefSeq gene 1 456 . - . ID=gene-LDO50_RS22485;Name=LDO50_RS22485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22485;partial=true;start_range=.,1 NZ_CAJZAO010000325.1 Protein Homology CDS 1 456 . - 0 ID=cds-WP_224020141.1;Parent=gene-LDO50_RS22485;Dbxref=GenBank:WP_224020141.1;Name=WP_224020141.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013089814.1;locus_tag=LDO50_RS22485;partial=true;product=Hsp70 family protein;protein_id=WP_224020141.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000325.1 RefSeq gene 502 825 . - . ID=gene-LDO50_RS22490;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=LDO50_RS22490;old_locus_tag=BVI1335_480002 NZ_CAJZAO010000325.1 Protein Homology CDS 502 825 . - 0 ID=cds-WP_011880121.1;Parent=gene-LDO50_RS22490;Dbxref=GenBank:WP_011880121.1;Name=WP_011880121.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=iscA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012205822.1;locus_tag=LDO50_RS22490;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_011880121.1;transl_table=11 NZ_CAJZAO010000325.1 RefSeq gene 833 1207 . - . ID=gene-LDO50_RS22495;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=LDO50_RS22495;old_locus_tag=BVI1335_480003 NZ_CAJZAO010000325.1 Protein Homology CDS 833 1207 . - 0 ID=cds-WP_224020142.1;Parent=gene-LDO50_RS22495;Dbxref=GenBank:WP_224020142.1;Name=WP_224020142.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880122.1;locus_tag=LDO50_RS22495;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_224020142.1;transl_table=11 NZ_CAJZAO010000325.1 RefSeq gene 1235 1672 . - . ID=gene-LDO50_RS22500;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=LDO50_RS22500;old_locus_tag=BVI1335_480004 NZ_CAJZAO010000325.1 Protein Homology CDS 1235 1672 . - 0 ID=cds-WP_046424817.1;Parent=gene-LDO50_RS22500;Dbxref=GenBank:WP_046424817.1;Name=WP_046424817.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007177253.1;locus_tag=LDO50_RS22500;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_046424817.1;transl_table=11 NZ_CAJZAO010000325.1 RefSeq gene 1980 3683 . + . ID=gene-LDO50_RS22505;Name=nifA;gbkey=Gene;gene=nifA;gene_biotype=protein_coding;locus_tag=LDO50_RS22505;old_locus_tag=BVI1335_480005 NZ_CAJZAO010000325.1 Protein Homology CDS 1980 3683 . + 0 ID=cds-WP_212187155.1;Parent=gene-LDO50_RS22505;Dbxref=GenBank:WP_212187155.1;Name=WP_212187155.1;Ontology_term=GO:0006355,GO:0009399,GO:0003700;gbkey=CDS;gene=nifA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,nitrogen fixation|0009399||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725852.1;locus_tag=LDO50_RS22505;product=nif-specific transcriptional activator NifA;protein_id=WP_212187155.1;transl_table=11 NZ_CAJZAO010000325.1 RefSeq gene 4064 5656 . + . ID=gene-LDO50_RS22510;Name=nifB;gbkey=Gene;gene=nifB;gene_biotype=protein_coding;locus_tag=LDO50_RS22510;old_locus_tag=BVI1335_480006 NZ_CAJZAO010000325.1 Protein Homology CDS 4064 5656 . + 0 ID=cds-WP_059582498.1;Parent=gene-LDO50_RS22510;Dbxref=GenBank:WP_059582498.1;Name=WP_059582498.1;Ontology_term=GO:0009399,GO:0051539,GO:1904047;gbkey=CDS;gene=nifB;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=nitrogen fixation|0009399||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725853.1;locus_tag=LDO50_RS22510;product=nitrogenase cofactor biosynthesis protein NifB;protein_id=WP_059582498.1;transl_table=11 NZ_CAJZAO010000325.1 RefSeq gene 5699 5893 . + . ID=gene-LDO50_RS22515;Name=LDO50_RS22515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22515;old_locus_tag=BVI1335_480007 NZ_CAJZAO010000325.1 Protein Homology CDS 5699 5893 . + 0 ID=cds-WP_011880126.1;Parent=gene-LDO50_RS22515;Dbxref=GenBank:WP_011880126.1;Name=WP_011880126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020202109.1;locus_tag=LDO50_RS22515;product=4Fe-4S binding protein;protein_id=WP_011880126.1;transl_table=11 NZ_CAJZAO010000325.1 RefSeq gene 5956 6360 . + . ID=gene-LDO50_RS22520;Name=LDO50_RS22520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22520;old_locus_tag=BVI1335_480008 NZ_CAJZAO010000325.1 Protein Homology CDS 5956 6360 . + 0 ID=cds-WP_059454644.1;Parent=gene-LDO50_RS22520;Dbxref=GenBank:WP_059454644.1;Name=WP_059454644.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880127.1;locus_tag=LDO50_RS22520;product=HesB/IscA family protein;protein_id=WP_059454644.1;transl_table=11 NZ_CAJZAO010000325.1 RefSeq gene 6377 6792 . + . ID=gene-LDO50_RS22525;Name=LDO50_RS22525;end_range=6792,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22525;partial=true NZ_CAJZAO010000325.1 Protein Homology CDS 6377 6792 . + 0 ID=cds-WP_224020143.1;Parent=gene-LDO50_RS22525;Dbxref=GenBank:WP_224020143.1;Name=WP_224020143.1;end_range=6792,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880128.1;locus_tag=LDO50_RS22525;partial=true;product=hypothetical protein;protein_id=WP_224020143.1;transl_table=11 ##sequence-region NZ_CAJZAO010000326.1 1 13798 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000326.1 RefSeq region 1 13798 . + . ID=NZ_CAJZAO010000326.1:1..13798;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_49 NZ_CAJZAO010000326.1 RefSeq gene 1 1644 . + . ID=gene-LDO50_RS22530;Name=LDO50_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22530;old_locus_tag=BVI1335_490001;partial=true;start_range=.,1 NZ_CAJZAO010000326.1 Protein Homology CDS 1 1644 . + 0 ID=cds-WP_224020144.1;Parent=gene-LDO50_RS22530;Dbxref=GenBank:WP_224020144.1;Name=WP_224020144.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353985.1;locus_tag=LDO50_RS22530;partial=true;product=S10 family peptidase;protein_id=WP_224020144.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000326.1 RefSeq gene 1732 2580 . - . ID=gene-LDO50_RS22535;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=LDO50_RS22535;old_locus_tag=BVI1335_490002 NZ_CAJZAO010000326.1 Protein Homology CDS 1732 2580 . - 0 ID=cds-WP_212159559.1;Parent=gene-LDO50_RS22535;Dbxref=GenBank:WP_212159559.1;Name=WP_212159559.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366857.1;locus_tag=LDO50_RS22535;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_212159559.1;transl_table=11 NZ_CAJZAO010000326.1 RefSeq gene 2852 3145 . - . ID=gene-LDO50_RS32010;Name=LDO50_RS32010;end_range=3145,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS32010;old_locus_tag=BVI1335_490003;partial=true NZ_CAJZAO010000326.1 Protein Homology CDS 2852 3145 . - 0 ID=cds-WP_443797862.1;Parent=gene-LDO50_RS32010;Dbxref=GenBank:WP_443797862.1;Name=WP_443797862.1;Ontology_term=GO:0016020;end_range=3145,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331232.1;locus_tag=LDO50_RS32010;partial=true;product=EamA family transporter;protein_id=WP_443797862.1;transl_table=11 NZ_CAJZAO010000326.1 RefSeq pseudogene 3156 3768 . - . ID=gene-LDO50_RS22540;Name=LDO50_RS22540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS22540;old_locus_tag=BVI1335_490004;partial=true;pseudo=true;start_range=.,3156 NZ_CAJZAO010000326.1 Protein Homology CDS 3156 3768 . - 0 ID=cds-LDO50_RS22540;Parent=gene-LDO50_RS22540;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010109426.1;locus_tag=LDO50_RS22540;partial=true;product=DMT family transporter;pseudo=true;start_range=.,3156;transl_table=11 NZ_CAJZAO010000326.1 RefSeq gene 3969 4154 . - . ID=gene-LDO50_RS22545;Name=LDO50_RS22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22545;old_locus_tag=BVI1335_490005 NZ_CAJZAO010000326.1 Protein Homology CDS 3969 4154 . - 0 ID=cds-WP_011880876.1;Parent=gene-LDO50_RS22545;Dbxref=GenBank:WP_011880876.1;Name=WP_011880876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853420.1;locus_tag=LDO50_RS22545;product=hypothetical protein;protein_id=WP_011880876.1;transl_table=11 NZ_CAJZAO010000326.1 RefSeq gene 4355 5113 . + . ID=gene-LDO50_RS22550;Name=LDO50_RS22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22550;old_locus_tag=BVI1335_490006 NZ_CAJZAO010000326.1 Protein Homology CDS 4355 5113 . + 0 ID=cds-WP_046424466.1;Parent=gene-LDO50_RS22550;Dbxref=GenBank:WP_046424466.1;Name=WP_046424466.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546920.1;locus_tag=LDO50_RS22550;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_046424466.1;transl_table=11 NZ_CAJZAO010000326.1 RefSeq gene 5218 7002 . + . ID=gene-LDO50_RS22555;Name=LDO50_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22555;old_locus_tag=BVI1335_490007 NZ_CAJZAO010000326.1 Protein Homology CDS 5218 7002 . + 0 ID=cds-WP_224020145.1;Parent=gene-LDO50_RS22555;Dbxref=GenBank:WP_224020145.1;Name=WP_224020145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758666.1;locus_tag=LDO50_RS22555;product=phospholipase D-like domain-containing protein;protein_id=WP_224020145.1;transl_table=11 NZ_CAJZAO010000326.1 RefSeq gene 7136 7810 . - . ID=gene-LDO50_RS22560;Name=LDO50_RS22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22560 NZ_CAJZAO010000326.1 Protein Homology CDS 7136 7810 . - 0 ID=cds-WP_034194751.1;Parent=gene-LDO50_RS22560;Dbxref=GenBank:WP_034194751.1;Name=WP_034194751.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366853.1;locus_tag=LDO50_RS22560;product=TetR family transcriptional regulator;protein_id=WP_034194751.1;transl_table=11 NZ_CAJZAO010000326.1 RefSeq gene 7927 8163 . - . ID=gene-LDO50_RS31150;Name=LDO50_RS31150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31150;old_locus_tag=BVI1335_490010 NZ_CAJZAO010000326.1 Protein Homology CDS 7927 8163 . - 0 ID=cds-WP_443797864.1;Parent=gene-LDO50_RS31150;Dbxref=GenBank:WP_443797864.1;Name=WP_443797864.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013434.6;locus_tag=LDO50_RS31150;product=hypothetical protein;protein_id=WP_443797864.1;transl_table=11 NZ_CAJZAO010000326.1 RefSeq pseudogene 8108 8231 . - . ID=gene-LDO50_RS32015;Name=LDO50_RS32015;end_range=8231,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS32015;partial=true;pseudo=true;start_range=.,8108 NZ_CAJZAO010000326.1 Protein Homology CDS 8108 8231 . - 1 ID=cds-LDO50_RS32015;Parent=gene-LDO50_RS32015;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=8231,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013434.6;locus_tag=LDO50_RS32015;partial=true;product=hypothetical protein;pseudo=true;start_range=.,8108;transl_table=11 NZ_CAJZAO010000326.1 RefSeq gene 8242 9043 . - . ID=gene-LDO50_RS22565;Name=LDO50_RS22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22565;old_locus_tag=BVI1335_490011;partial=true;start_range=.,8242 NZ_CAJZAO010000326.1 Protein Homology CDS 8242 9043 . - 0 ID=cds-WP_443797863.1;Parent=gene-LDO50_RS22565;Dbxref=GenBank:WP_443797863.1;Name=WP_443797863.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331236.1;locus_tag=LDO50_RS22565;partial=true;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_443797863.1;start_range=.,8242;transl_table=11 NZ_CAJZAO010000326.1 RefSeq gene 9667 11178 . + . ID=gene-LDO50_RS22570;Name=amaB;gbkey=Gene;gene=amaB;gene_biotype=protein_coding;gene_synonym=amaA;locus_tag=LDO50_RS22570;old_locus_tag=BVI1335_490013 NZ_CAJZAO010000326.1 Protein Homology CDS 9667 11178 . + 0 ID=cds-WP_034194750.1;Parent=gene-LDO50_RS22570;Dbxref=GenBank:WP_034194750.1;Name=WP_034194750.1;gbkey=CDS;gene=amaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880871.1;locus_tag=LDO50_RS22570;product=L-piperidine-6-carboxylate dehydrogenase;protein_id=WP_034194750.1;transl_table=11 NZ_CAJZAO010000326.1 RefSeq gene 11309 13610 . - . ID=gene-LDO50_RS22575;Name=LDO50_RS22575;end_range=13610,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22575;old_locus_tag=BVI1335_490014;partial=true NZ_CAJZAO010000326.1 Protein Homology CDS 11309 13610 . - 1 ID=cds-WP_372586117.1;Parent=gene-LDO50_RS22575;Dbxref=GenBank:WP_372586117.1;Name=WP_372586117.1;end_range=13610,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724048.1;locus_tag=LDO50_RS22575;partial=true;product=DUF3772 domain-containing protein;protein_id=WP_372586117.1;transl_table=11 ##sequence-region NZ_CAJZAO010000327.1 1 1809 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000327.1 RefSeq region 1 1809 . + . ID=NZ_CAJZAO010000327.1:1..1809;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_5 NZ_CAJZAO010000327.1 RefSeq gene 1 132 . - . ID=gene-LDO50_RS32020;Name=LDO50_RS32020;end_range=132,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS32020;partial=true;start_range=.,1 NZ_CAJZAO010000327.1 Protein Homology CDS 1 132 . - 0 ID=cds-WP_443797866.1;Parent=gene-LDO50_RS32020;Dbxref=GenBank:WP_443797866.1;Name=WP_443797866.1;end_range=132,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467483.1;locus_tag=LDO50_RS32020;partial=true;product=hypothetical protein;protein_id=WP_443797866.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000327.1 RefSeq gene 143 1809 . - . ID=gene-LDO50_RS22580;Name=LDO50_RS22580;end_range=1809,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22580;old_locus_tag=BVI1335_50002;partial=true;start_range=.,143 NZ_CAJZAO010000327.1 Protein Homology CDS 143 1809 . - 1 ID=cds-WP_443797865.1;Parent=gene-LDO50_RS22580;Dbxref=GenBank:WP_443797865.1;Name=WP_443797865.1;end_range=1809,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467483.1;locus_tag=LDO50_RS22580;partial=true;product=site-specific recombinase;protein_id=WP_443797865.1;start_range=.,143;transl_table=11 ##sequence-region NZ_CAJZAO010000328.1 1 26983 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000328.1 RefSeq region 1 26983 . + . ID=NZ_CAJZAO010000328.1:1..26983;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_50 NZ_CAJZAO010000328.1 RefSeq gene 1 392 . - . ID=gene-LDO50_RS22585;Name=LDO50_RS22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22585;partial=true;start_range=.,1 NZ_CAJZAO010000328.1 Protein Homology CDS 1 392 . - 0 ID=cds-WP_290370767.1;Parent=gene-LDO50_RS22585;Dbxref=GenBank:WP_290370767.1;Name=WP_290370767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401751.1;locus_tag=LDO50_RS22585;partial=true;product=DnaA N-terminal domain-containing protein;protein_id=WP_290370767.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 814 948 . + . ID=gene-LDO50_RS22590;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=LDO50_RS22590;old_locus_tag=BVI1335_500003 NZ_CAJZAO010000328.1 Protein Homology CDS 814 948 . + 0 ID=cds-WP_004198824.1;Parent=gene-LDO50_RS22590;Dbxref=GenBank:WP_004198824.1;Name=WP_004198824.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003816025.1;locus_tag=LDO50_RS22590;product=50S ribosomal protein L34;protein_id=WP_004198824.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 964 1425 . + . ID=gene-LDO50_RS22595;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=LDO50_RS22595;old_locus_tag=BVI1335_500004 NZ_CAJZAO010000328.1 Protein Homology CDS 964 1425 . + 0 ID=cds-WP_011886458.1;Parent=gene-LDO50_RS22595;Dbxref=GenBank:WP_011886458.1;Name=WP_011886458.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658267.1;locus_tag=LDO50_RS22595;product=ribonuclease P protein component;protein_id=WP_011886458.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 1501 1767 . + . ID=gene-LDO50_RS22600;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=LDO50_RS22600;old_locus_tag=BVI1335_500005 NZ_CAJZAO010000328.1 Protein Homology CDS 1501 1767 . + 0 ID=cds-WP_011886457.1;Parent=gene-LDO50_RS22600;Dbxref=GenBank:WP_011886457.1;Name=WP_011886457.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489939.1;locus_tag=LDO50_RS22600;product=membrane protein insertion efficiency factor YidD;protein_id=WP_011886457.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 1776 3437 . + . ID=gene-LDO50_RS22605;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=LDO50_RS22605;old_locus_tag=BVI1335_500006 NZ_CAJZAO010000328.1 Protein Homology CDS 1776 3437 . + 0 ID=cds-WP_224020146.1;Parent=gene-LDO50_RS22605;Dbxref=GenBank:WP_224020146.1;Name=WP_224020146.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546513.1;locus_tag=LDO50_RS22605;product=membrane protein insertase YidC;protein_id=WP_224020146.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 3555 3992 . - . ID=gene-LDO50_RS22610;Name=LDO50_RS22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22610;old_locus_tag=BVI1335_500007 NZ_CAJZAO010000328.1 Protein Homology CDS 3555 3992 . - 0 ID=cds-WP_011886455.1;Parent=gene-LDO50_RS22610;Dbxref=GenBank:WP_011886455.1;Name=WP_011886455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886455.1;locus_tag=LDO50_RS22610;product=transcriptional regulator;protein_id=WP_011886455.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 4329 5723 . + . ID=gene-LDO50_RS22615;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=LDO50_RS22615;old_locus_tag=BVI1335_500008 NZ_CAJZAO010000328.1 Protein Homology CDS 4329 5723 . + 0 ID=cds-WP_014723892.1;Parent=gene-LDO50_RS22615;Dbxref=GenBank:WP_014723892.1;Name=WP_014723892.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041491300.1;locus_tag=LDO50_RS22615;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_014723892.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 5816 5938 . - . ID=gene-LDO50_RS30890;Name=LDO50_RS30890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30890 NZ_CAJZAO010000328.1 GeneMarkS-2+ CDS 5816 5938 . - 0 ID=cds-WP_256976788.1;Parent=gene-LDO50_RS30890;Dbxref=GenBank:WP_256976788.1;Name=WP_256976788.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS30890;product=hypothetical protein;protein_id=WP_256976788.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 6087 7445 . - . ID=gene-LDO50_RS22620;Name=LDO50_RS22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22620;old_locus_tag=BVI1335_500009 NZ_CAJZAO010000328.1 Protein Homology CDS 6087 7445 . - 0 ID=cds-WP_059894371.1;Parent=gene-LDO50_RS22620;Dbxref=GenBank:WP_059894371.1;Name=WP_059894371.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498694.1;locus_tag=LDO50_RS22620;product=sensor domain-containing diguanylate cyclase;protein_id=WP_059894371.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 7558 7806 . - . ID=gene-LDO50_RS22625;Name=LDO50_RS22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22625;old_locus_tag=BVI1335_500010 NZ_CAJZAO010000328.1 Protein Homology CDS 7558 7806 . - 0 ID=cds-WP_014723890.1;Parent=gene-LDO50_RS22625;Dbxref=GenBank:WP_014723890.1;Name=WP_014723890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489924.1;locus_tag=LDO50_RS22625;product=DUF2795 domain-containing protein;protein_id=WP_014723890.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 7916 8086 . - . ID=gene-LDO50_RS22630;Name=LDO50_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22630;old_locus_tag=BVI1335_500011 NZ_CAJZAO010000328.1 Protein Homology CDS 7916 8086 . - 0 ID=cds-WP_006489933.1;Parent=gene-LDO50_RS22630;Dbxref=GenBank:WP_006489933.1;Name=WP_006489933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010113186.1;locus_tag=LDO50_RS22630;product=hypothetical protein;protein_id=WP_006489933.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 8238 8780 . + . ID=gene-LDO50_RS22635;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=LDO50_RS22635;old_locus_tag=BVI1335_500012 NZ_CAJZAO010000328.1 Protein Homology CDS 8238 8780 . + 0 ID=cds-WP_011886450.1;Parent=gene-LDO50_RS22635;Dbxref=GenBank:WP_011886450.1;Name=WP_011886450.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365023.1;locus_tag=LDO50_RS22635;product=spermidine N1-acetyltransferase;protein_id=WP_011886450.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 9279 9626 . + . ID=gene-LDO50_RS22640;Name=sap1;gbkey=Gene;gene=sap1;gene_biotype=protein_coding;locus_tag=LDO50_RS22640;old_locus_tag=BVI1335_500014 NZ_CAJZAO010000328.1 Protein Homology CDS 9279 9626 . + 0 ID=cds-WP_011886449.1;Parent=gene-LDO50_RS22640;Dbxref=GenBank:WP_011886449.1;Name=WP_011886449.1;gbkey=CDS;gene=sap1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525830.1;locus_tag=LDO50_RS22640;product=surface attachment protein Sap1;protein_id=WP_011886449.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 9804 10358 . + . ID=gene-LDO50_RS22645;Name=LDO50_RS22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22645;old_locus_tag=BVI1335_500015 NZ_CAJZAO010000328.1 Protein Homology CDS 9804 10358 . + 0 ID=cds-WP_014723888.1;Parent=gene-LDO50_RS22645;Dbxref=GenBank:WP_014723888.1;Name=WP_014723888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908298.1;locus_tag=LDO50_RS22645;product=YaeQ family protein;protein_id=WP_014723888.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 10369 10782 . - . ID=gene-LDO50_RS22650;Name=LDO50_RS22650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22650;old_locus_tag=BVI1335_500016 NZ_CAJZAO010000328.1 Protein Homology CDS 10369 10782 . - 0 ID=cds-WP_011886447.1;Parent=gene-LDO50_RS22650;Dbxref=GenBank:WP_011886447.1;Name=WP_011886447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214381.1;locus_tag=LDO50_RS22650;product=VOC family protein;protein_id=WP_011886447.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 11209 12300 . + . ID=gene-LDO50_RS22655;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=LDO50_RS22655;old_locus_tag=BVI1335_500017 NZ_CAJZAO010000328.1 Protein Homology CDS 11209 12300 . + 0 ID=cds-WP_059739046.1;Parent=gene-LDO50_RS22655;Dbxref=GenBank:WP_059739046.1;Name=WP_059739046.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477427.1;locus_tag=LDO50_RS22655;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_059739046.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 12297 13295 . + . ID=gene-LDO50_RS22660;Name=LDO50_RS22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22660;old_locus_tag=BVI1335_500018 NZ_CAJZAO010000328.1 Protein Homology CDS 12297 13295 . + 0 ID=cds-WP_011886445.1;Parent=gene-LDO50_RS22660;Dbxref=GenBank:WP_011886445.1;Name=WP_011886445.1;Ontology_term=GO:0006281,GO:0019104,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895662.1;locus_tag=LDO50_RS22660;product=DNA-3-methyladenine glycosylase family protein;protein_id=WP_011886445.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 13657 13872 . - . ID=gene-LDO50_RS22665;Name=LDO50_RS22665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22665;old_locus_tag=BVI1335_500020 NZ_CAJZAO010000328.1 GeneMarkS-2+ CDS 13657 13872 . - 0 ID=cds-WP_155624998.1;Parent=gene-LDO50_RS22665;Dbxref=GenBank:WP_155624998.1;Name=WP_155624998.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS22665;product=hypothetical protein;protein_id=WP_155624998.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 13859 15472 . + . ID=gene-LDO50_RS22670;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=LDO50_RS22670;old_locus_tag=BVI1335_500021 NZ_CAJZAO010000328.1 Protein Homology CDS 13859 15472 . + 0 ID=cds-WP_059568294.1;Parent=gene-LDO50_RS22670;Dbxref=GenBank:WP_059568294.1;Name=WP_059568294.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009962323.1;locus_tag=LDO50_RS22670;product=glutamate--cysteine ligase;protein_id=WP_059568294.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 15527 15832 . - . ID=gene-LDO50_RS22675;Name=LDO50_RS22675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22675;old_locus_tag=BVI1335_500022 NZ_CAJZAO010000328.1 Protein Homology CDS 15527 15832 . - 0 ID=cds-WP_011886443.1;Parent=gene-LDO50_RS22675;Dbxref=GenBank:WP_011886443.1;Name=WP_011886443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477430.1;locus_tag=LDO50_RS22675;product=DUF4148 domain-containing protein;protein_id=WP_011886443.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 16167 17807 . + . ID=gene-LDO50_RS22680;Name=LDO50_RS22680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22680;old_locus_tag=BVI1335_500023 NZ_CAJZAO010000328.1 Protein Homology CDS 16167 17807 . + 0 ID=cds-WP_011886442.1;Parent=gene-LDO50_RS22680;Dbxref=GenBank:WP_011886442.1;Name=WP_011886442.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886442.1;locus_tag=LDO50_RS22680;product=L-lactate permease;protein_id=WP_011886442.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 17856 18065 . + . ID=gene-LDO50_RS22685;Name=LDO50_RS22685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22685;old_locus_tag=BVI1335_500024 NZ_CAJZAO010000328.1 Protein Homology CDS 17856 18065 . + 0 ID=cds-WP_224020147.1;Parent=gene-LDO50_RS22685;Dbxref=GenBank:WP_224020147.1;Name=WP_224020147.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023134.6;locus_tag=LDO50_RS22685;product=CGNR zinc finger domain-containing protein;protein_id=WP_224020147.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 18088 19137 . - . ID=gene-LDO50_RS22690;Name=LDO50_RS22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22690;old_locus_tag=BVI1335_500025 NZ_CAJZAO010000328.1 Protein Homology CDS 18088 19137 . - 0 ID=cds-WP_059474635.1;Parent=gene-LDO50_RS22690;Dbxref=GenBank:WP_059474635.1;Name=WP_059474635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546491.1;locus_tag=LDO50_RS22690;product=DUF3592 domain-containing protein;protein_id=WP_059474635.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 19301 19376 . - . ID=gene-LDO50_RS22695;Name=LDO50_RS22695;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS22695;old_locus_tag=BVI1335_TRNA38 NZ_CAJZAO010000328.1 tRNAscan-SE tRNA 19301 19376 . - . ID=rna-LDO50_RS22695;Parent=gene-LDO50_RS22695;anticodon=(pos:complement(19341..19343));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS22695;product=tRNA-Lys NZ_CAJZAO010000328.1 tRNAscan-SE exon 19301 19376 . - . ID=exon-LDO50_RS22695-1;Parent=rna-LDO50_RS22695;anticodon=(pos:complement(19341..19343));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS22695;product=tRNA-Lys NZ_CAJZAO010000328.1 RefSeq gene 19566 19970 . + . ID=gene-LDO50_RS22700;Name=LDO50_RS22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22700;old_locus_tag=BVI1335_500026 NZ_CAJZAO010000328.1 Protein Homology CDS 19566 19970 . + 0 ID=cds-WP_011886440.1;Parent=gene-LDO50_RS22700;Dbxref=GenBank:WP_011886440.1;Name=WP_011886440.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877330.1;locus_tag=LDO50_RS22700;product=PaaI family thioesterase;protein_id=WP_011886440.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 19979 20845 . + . ID=gene-LDO50_RS22705;Name=LDO50_RS22705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22705;old_locus_tag=BVI1335_500027 NZ_CAJZAO010000328.1 Protein Homology CDS 19979 20845 . + 0 ID=cds-WP_014723873.1;Parent=gene-LDO50_RS22705;Dbxref=GenBank:WP_014723873.1;Name=WP_014723873.1;Ontology_term=GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407226.1;locus_tag=LDO50_RS22705;product=patatin-like phospholipase family protein;protein_id=WP_014723873.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 20893 21906 . - . ID=gene-LDO50_RS22710;Name=LDO50_RS22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22710;old_locus_tag=BVI1335_500028 NZ_CAJZAO010000328.1 Protein Homology CDS 20893 21906 . - 0 ID=cds-WP_034192453.1;Parent=gene-LDO50_RS22710;Dbxref=GenBank:WP_034192453.1;Name=WP_034192453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090305.1;locus_tag=LDO50_RS22710;product=D-2-hydroxyacid dehydrogenase family protein;protein_id=WP_034192453.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 22307 23356 . + . ID=gene-LDO50_RS22715;Name=LDO50_RS22715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22715;old_locus_tag=BVI1335_500030 NZ_CAJZAO010000328.1 Protein Homology CDS 22307 23356 . + 0 ID=cds-WP_011886437.1;Parent=gene-LDO50_RS22715;Dbxref=GenBank:WP_011886437.1;Name=WP_011886437.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893648.1;locus_tag=LDO50_RS22715;product=LysR family transcriptional regulator;protein_id=WP_011886437.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 23473 26070 . - . ID=gene-LDO50_RS22720;Name=LDO50_RS22720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22720;old_locus_tag=BVI1335_500031 NZ_CAJZAO010000328.1 Protein Homology CDS 23473 26070 . - 0 ID=cds-WP_011886436.1;Parent=gene-LDO50_RS22720;Dbxref=GenBank:WP_011886436.1;Name=WP_011886436.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009902112.1;locus_tag=LDO50_RS22720;product=DNA topoisomerase III;protein_id=WP_011886436.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq gene 26263 26643 . - . ID=gene-LDO50_RS22725;Name=LDO50_RS22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22725;old_locus_tag=BVI1335_500033 NZ_CAJZAO010000328.1 Protein Homology CDS 26263 26643 . - 0 ID=cds-WP_011886435.1;Parent=gene-LDO50_RS22725;Dbxref=GenBank:WP_011886435.1;Name=WP_011886435.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477457.1;locus_tag=LDO50_RS22725;product=thioredoxin family protein;protein_id=WP_011886435.1;transl_table=11 NZ_CAJZAO010000328.1 RefSeq pseudogene 26779 26983 . - . ID=gene-LDO50_RS22730;Name=LDO50_RS22730;end_range=26983,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS22730;partial=true;pseudo=true;start_range=.,26779 NZ_CAJZAO010000328.1 Protein Homology CDS 26779 26983 . - 0 ID=cds-LDO50_RS22730;Parent=gene-LDO50_RS22730;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=26983,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723871.1;locus_tag=LDO50_RS22730;partial=true;product=DNA-processing protein DprA;pseudo=true;start_range=.,26779;transl_table=11 ##sequence-region NZ_CAJZAO010000329.1 1 8744 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000329.1 RefSeq region 1 8744 . + . ID=NZ_CAJZAO010000329.1:1..8744;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_51 NZ_CAJZAO010000329.1 RefSeq gene 1 710 . + . ID=gene-LDO50_RS22735;Name=mmsB;gbkey=Gene;gene=mmsB;gene_biotype=protein_coding;locus_tag=LDO50_RS22735;old_locus_tag=BVI1335_510001;partial=true;start_range=.,1 NZ_CAJZAO010000329.1 Protein Homology CDS 1 710 . + 2 ID=cds-WP_224020148.1;Parent=gene-LDO50_RS22735;Dbxref=GenBank:WP_224020148.1;Name=WP_224020148.1;Ontology_term=GO:0006574,GO:0008442,GO:0051287;gbkey=CDS;gene=mmsB;go_function=3-hydroxyisobutyrate dehydrogenase activity|0008442||IEA,NAD binding|0051287||IEA;go_process=L-valine catabolic process|0006574||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899744.1;locus_tag=LDO50_RS22735;partial=true;product=3-hydroxyisobutyrate dehydrogenase;protein_id=WP_224020148.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000329.1 RefSeq gene 817 1149 . - . ID=gene-LDO50_RS22740;Name=LDO50_RS22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22740;old_locus_tag=BVI1335_510002 NZ_CAJZAO010000329.1 Protein Homology CDS 817 1149 . - 0 ID=cds-WP_034193802.1;Parent=gene-LDO50_RS22740;Dbxref=GenBank:WP_034193802.1;Name=WP_034193802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355632.1;locus_tag=LDO50_RS22740;product=hypothetical protein;protein_id=WP_034193802.1;transl_table=11 NZ_CAJZAO010000329.1 RefSeq gene 2021 2785 . + . ID=gene-LDO50_RS22745;Name=LDO50_RS22745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22745;old_locus_tag=BVI1335_510004 NZ_CAJZAO010000329.1 Protein Homology CDS 2021 2785 . + 0 ID=cds-WP_011881909.1;Parent=gene-LDO50_RS22745;Dbxref=GenBank:WP_011881909.1;Name=WP_011881909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754364.1;locus_tag=LDO50_RS22745;product=DUF4397 domain-containing protein;protein_id=WP_011881909.1;transl_table=11 NZ_CAJZAO010000329.1 RefSeq gene 2837 3397 . - . ID=gene-LDO50_RS22750;Name=LDO50_RS22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22750;old_locus_tag=BVI1335_510006 NZ_CAJZAO010000329.1 Protein Homology CDS 2837 3397 . - 0 ID=cds-WP_034193801.1;Parent=gene-LDO50_RS22750;Dbxref=GenBank:WP_034193801.1;Name=WP_034193801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479262.1;locus_tag=LDO50_RS22750;product=DUF3005 domain-containing protein;protein_id=WP_034193801.1;transl_table=11 NZ_CAJZAO010000329.1 RefSeq gene 3649 3939 . - . ID=gene-LDO50_RS22755;Name=LDO50_RS22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22755 NZ_CAJZAO010000329.1 Protein Homology CDS 3649 3939 . - 0 ID=cds-WP_050781904.1;Parent=gene-LDO50_RS22755;Dbxref=GenBank:WP_050781904.1;Name=WP_050781904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762278.1;locus_tag=LDO50_RS22755;product=hypothetical protein;protein_id=WP_050781904.1;transl_table=11 NZ_CAJZAO010000329.1 RefSeq pseudogene 4487 5652 . + . ID=gene-LDO50_RS22760;Name=LDO50_RS22760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS22760;old_locus_tag=BVI1335_510007;pseudo=true NZ_CAJZAO010000329.1 Protein Homology CDS 4487 5652 . + 0 ID=cds-LDO50_RS22760;Parent=gene-LDO50_RS22760;Note=frameshifted;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725135.1;locus_tag=LDO50_RS22760;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CAJZAO010000329.1 RefSeq pseudogene 6042 6845 . - . ID=gene-LDO50_RS22765;Name=LDO50_RS22765;end_range=6845,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS22765;old_locus_tag=BVI1335_510008;partial=true;pseudo=true NZ_CAJZAO010000329.1 Protein Homology CDS 6042 6845 . - 0 ID=cds-LDO50_RS22765;Parent=gene-LDO50_RS22765;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857;end_range=6845,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881906.1;locus_tag=LDO50_RS22765;partial=true;product=MFS transporter;pseudo=true;transl_table=11 NZ_CAJZAO010000329.1 RefSeq gene 7198 8424 . - . ID=gene-LDO50_RS22770;Name=LDO50_RS22770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22770;old_locus_tag=BVI1335_510009 NZ_CAJZAO010000329.1 Protein Homology CDS 7198 8424 . - 0 ID=cds-WP_371464616.1;Parent=gene-LDO50_RS22770;Dbxref=GenBank:WP_371464616.1;Name=WP_371464616.1;Ontology_term=GO:0016787,GO:0016810;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726126.1;locus_tag=LDO50_RS22770;product=M20 aminoacylase family protein;protein_id=WP_371464616.1;transl_table=11 NZ_CAJZAO010000329.1 RefSeq gene 8454 8744 . - . ID=gene-LDO50_RS22775;Name=LDO50_RS22775;end_range=8744,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22775;old_locus_tag=BVI1335_510010;partial=true NZ_CAJZAO010000329.1 Protein Homology CDS 8454 8744 . - 0 ID=cds-WP_224020150.1;Parent=gene-LDO50_RS22775;Dbxref=GenBank:WP_224020150.1;Name=WP_224020150.1;Ontology_term=GO:0016491;end_range=8744,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661234.1;locus_tag=LDO50_RS22775;partial=true;product=aldehyde dehydrogenase family protein;protein_id=WP_224020150.1;transl_table=11 ##sequence-region NZ_CAJZAO010000330.1 1 16105 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000330.1 RefSeq region 1 16105 . + . ID=NZ_CAJZAO010000330.1:1..16105;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_52 NZ_CAJZAO010000330.1 RefSeq gene 78 1202 . - . ID=gene-LDO50_RS22780;Name=LDO50_RS22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22780;old_locus_tag=BVI1335_520002 NZ_CAJZAO010000330.1 Protein Homology CDS 78 1202 . - 0 ID=cds-WP_059739347.1;Parent=gene-LDO50_RS22780;Dbxref=GenBank:WP_059739347.1;Name=WP_059739347.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549246.1;locus_tag=LDO50_RS22780;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_059739347.1;transl_table=11 NZ_CAJZAO010000330.1 RefSeq gene 1352 2266 . + . ID=gene-LDO50_RS22785;Name=LDO50_RS22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22785;old_locus_tag=BVI1335_520003 NZ_CAJZAO010000330.1 Protein Homology CDS 1352 2266 . + 0 ID=cds-WP_046423057.1;Parent=gene-LDO50_RS22785;Dbxref=GenBank:WP_046423057.1;Name=WP_046423057.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723962.1;locus_tag=LDO50_RS22785;product=LysR family transcriptional regulator;protein_id=WP_046423057.1;transl_table=11 NZ_CAJZAO010000330.1 RefSeq gene 2400 2762 . + . ID=gene-LDO50_RS22790;Name=LDO50_RS22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22790;old_locus_tag=BVI1335_520004 NZ_CAJZAO010000330.1 Protein Homology CDS 2400 2762 . + 0 ID=cds-WP_011880759.1;Parent=gene-LDO50_RS22790;Dbxref=GenBank:WP_011880759.1;Name=WP_011880759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880759.1;locus_tag=LDO50_RS22790;product=YbjQ family protein;protein_id=WP_011880759.1;transl_table=11 NZ_CAJZAO010000330.1 RefSeq gene 2769 4019 . - . ID=gene-LDO50_RS22795;Name=LDO50_RS22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22795;old_locus_tag=BVI1335_520005 NZ_CAJZAO010000330.1 Protein Homology CDS 2769 4019 . - 0 ID=cds-WP_059474663.1;Parent=gene-LDO50_RS22795;Dbxref=GenBank:WP_059474663.1;Name=WP_059474663.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396385.1;locus_tag=LDO50_RS22795;product=MFS transporter;protein_id=WP_059474663.1;transl_table=11 NZ_CAJZAO010000330.1 RefSeq gene 4088 4261 . + . ID=gene-LDO50_RS22800;Name=LDO50_RS22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22800;old_locus_tag=BVI1335_520006 NZ_CAJZAO010000330.1 GeneMarkS-2+ CDS 4088 4261 . + 0 ID=cds-WP_155624610.1;Parent=gene-LDO50_RS22800;Dbxref=GenBank:WP_155624610.1;Name=WP_155624610.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS22800;product=hypothetical protein;protein_id=WP_155624610.1;transl_table=11 NZ_CAJZAO010000330.1 RefSeq gene 4277 5416 . - . ID=gene-LDO50_RS22805;Name=LDO50_RS22805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22805;old_locus_tag=BVI1335_520007 NZ_CAJZAO010000330.1 Protein Homology CDS 4277 5416 . - 0 ID=cds-WP_011880761.1;Parent=gene-LDO50_RS22805;Dbxref=GenBank:WP_011880761.1;Name=WP_011880761.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898544.1;locus_tag=LDO50_RS22805;product=porin;protein_id=WP_011880761.1;transl_table=11 NZ_CAJZAO010000330.1 RefSeq gene 5670 6644 . - . ID=gene-LDO50_RS22810;Name=choX;gbkey=Gene;gene=choX;gene_biotype=protein_coding;locus_tag=LDO50_RS22810;old_locus_tag=BVI1335_520008 NZ_CAJZAO010000330.1 Protein Homology CDS 5670 6644 . - 0 ID=cds-WP_014723964.1;Parent=gene-LDO50_RS22810;Dbxref=GenBank:WP_014723964.1;Name=WP_014723964.1;Ontology_term=GO:0015871,GO:0033265,GO:0042597;gbkey=CDS;gene=choX;go_component=periplasmic space|0042597||IEA;go_function=choline binding|0033265||IEA;go_process=choline transport|0015871||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756091.1;locus_tag=LDO50_RS22810;product=choline ABC transporter substrate-binding protein;protein_id=WP_014723964.1;transl_table=11 NZ_CAJZAO010000330.1 RefSeq gene 6689 8224 . - . ID=gene-LDO50_RS22815;Name=betC;gbkey=Gene;gene=betC;gene_biotype=protein_coding;locus_tag=LDO50_RS22815;old_locus_tag=BVI1335_520010 NZ_CAJZAO010000330.1 Protein Homology CDS 6689 8224 . - 0 ID=cds-WP_069224717.1;Parent=gene-LDO50_RS22815;Dbxref=GenBank:WP_069224717.1;Name=WP_069224717.1;Ontology_term=GO:0008484;gbkey=CDS;gene=betC;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756090.1;locus_tag=LDO50_RS22815;product=choline-sulfatase;protein_id=WP_069224717.1;transl_table=11 NZ_CAJZAO010000330.1 RefSeq gene 8424 9350 . + . ID=gene-LDO50_RS22820;Name=LDO50_RS22820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22820;old_locus_tag=BVI1335_520012 NZ_CAJZAO010000330.1 Protein Homology CDS 8424 9350 . + 0 ID=cds-WP_081054290.1;Parent=gene-LDO50_RS22820;Dbxref=GenBank:WP_081054290.1;Name=WP_081054290.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880764.1;locus_tag=LDO50_RS22820;product=choline sulfate utilization transcriptional regulator;protein_id=WP_081054290.1;transl_table=11 NZ_CAJZAO010000330.1 RefSeq gene 9532 10416 . + . ID=gene-LDO50_RS22825;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=LDO50_RS22825;old_locus_tag=BVI1335_520013 NZ_CAJZAO010000330.1 Protein Homology CDS 9532 10416 . + 0 ID=cds-WP_011880765.1;Parent=gene-LDO50_RS22825;Dbxref=GenBank:WP_011880765.1;Name=WP_011880765.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723968.1;locus_tag=LDO50_RS22825;product=formyltetrahydrofolate deformylase;protein_id=WP_011880765.1;transl_table=11 NZ_CAJZAO010000330.1 RefSeq gene 10542 12197 . - . ID=gene-LDO50_RS22830;Name=LDO50_RS22830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22830;old_locus_tag=BVI1335_520014 NZ_CAJZAO010000330.1 Protein Homology CDS 10542 12197 . - 0 ID=cds-WP_034195492.1;Parent=gene-LDO50_RS22830;Dbxref=GenBank:WP_034195492.1;Name=WP_034195492.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396370.1;locus_tag=LDO50_RS22830;product=APC family permease;protein_id=WP_034195492.1;transl_table=11 NZ_CAJZAO010000330.1 RefSeq gene 12433 13296 . - . ID=gene-LDO50_RS22835;Name=LDO50_RS22835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22835;old_locus_tag=BVI1335_520015 NZ_CAJZAO010000330.1 Protein Homology CDS 12433 13296 . - 0 ID=cds-WP_034195493.1;Parent=gene-LDO50_RS22835;Dbxref=GenBank:WP_034195493.1;Name=WP_034195493.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723970.1;locus_tag=LDO50_RS22835;product=glycine betaine ABC transporter substrate-binding protein;protein_id=WP_034195493.1;transl_table=11 NZ_CAJZAO010000330.1 RefSeq gene 13432 14580 . - . ID=gene-LDO50_RS22840;Name=LDO50_RS22840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22840;old_locus_tag=BVI1335_520016 NZ_CAJZAO010000330.1 Protein Homology CDS 13432 14580 . - 0 ID=cds-WP_011880768.1;Parent=gene-LDO50_RS22840;Dbxref=GenBank:WP_011880768.1;Name=WP_011880768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749542.1;locus_tag=LDO50_RS22840;product=hybrid-cluster NAD(P)-dependent oxidoreductase;protein_id=WP_011880768.1;transl_table=11 NZ_CAJZAO010000330.1 RefSeq gene 14610 15851 . - . ID=gene-LDO50_RS22845;Name=LDO50_RS22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22845;old_locus_tag=BVI1335_520017 NZ_CAJZAO010000330.1 Protein Homology CDS 14610 15851 . - 0 ID=cds-WP_011880769.1;Parent=gene-LDO50_RS22845;Dbxref=GenBank:WP_011880769.1;Name=WP_011880769.1;Ontology_term=GO:0005506,GO:0016705,GO:0051537;gbkey=CDS;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089906.1;locus_tag=LDO50_RS22845;product=aromatic ring-hydroxylating oxygenase subunit alpha;protein_id=WP_011880769.1;transl_table=11 NZ_CAJZAO010000330.1 RefSeq pseudogene 15905 16105 . - . ID=gene-LDO50_RS22850;Name=LDO50_RS22850;end_range=16105,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS22850;partial=true;pseudo=true NZ_CAJZAO010000330.1 Protein Homology CDS 15905 16105 . - 0 ID=cds-LDO50_RS22850;Parent=gene-LDO50_RS22850;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=16105,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354185.1;locus_tag=LDO50_RS22850;partial=true;product=electron transfer flavoprotein subunit beta/FixA family protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000331.1 1 149011 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000331.1 RefSeq region 1 149011 . + . ID=NZ_CAJZAO010000331.1:1..149011;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_53 NZ_CAJZAO010000331.1 RefSeq gene 370 633 . + . ID=gene-LDO50_RS22855;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=LDO50_RS22855;old_locus_tag=BVI1335_530001 NZ_CAJZAO010000331.1 Protein Homology CDS 370 633 . + 0 ID=cds-WP_011882303.1;Parent=gene-LDO50_RS22855;Dbxref=GenBank:WP_011882303.1;Name=WP_011882303.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483034.1;locus_tag=LDO50_RS22855;product=translation initiation factor IF-1;protein_id=WP_011882303.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 911 2299 . - . ID=gene-LDO50_RS22860;Name=LDO50_RS22860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22860;old_locus_tag=BVI1335_530002 NZ_CAJZAO010000331.1 Protein Homology CDS 911 2299 . - 0 ID=cds-WP_224020151.1;Parent=gene-LDO50_RS22860;Dbxref=GenBank:WP_224020151.1;Name=WP_224020151.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483018.1;locus_tag=LDO50_RS22860;product=MFS transporter;protein_id=WP_224020151.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 2695 2943 . + . ID=gene-LDO50_RS22865;Name=LDO50_RS22865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22865;old_locus_tag=BVI1335_530003 NZ_CAJZAO010000331.1 Protein Homology CDS 2695 2943 . + 0 ID=cds-WP_014724831.1;Parent=gene-LDO50_RS22865;Dbxref=GenBank:WP_014724831.1;Name=WP_014724831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882301.1;locus_tag=LDO50_RS22865;product=hypothetical protein;protein_id=WP_014724831.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 2964 4127 . - . ID=gene-LDO50_RS22870;Name=LDO50_RS22870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22870;old_locus_tag=BVI1335_530004 NZ_CAJZAO010000331.1 Protein Homology CDS 2964 4127 . - 0 ID=cds-WP_011882300.1;Parent=gene-LDO50_RS22870;Dbxref=GenBank:WP_011882300.1;Name=WP_011882300.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882300.1;locus_tag=LDO50_RS22870;product=MFS transporter;protein_id=WP_011882300.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 4406 5050 . + . ID=gene-LDO50_RS22875;Name=LDO50_RS22875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22875;old_locus_tag=BVI1335_530006 NZ_CAJZAO010000331.1 Protein Homology CDS 4406 5050 . + 0 ID=cds-WP_011882299.1;Parent=gene-LDO50_RS22875;Dbxref=GenBank:WP_011882299.1;Name=WP_011882299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020066727.1;locus_tag=LDO50_RS22875;product=DUF1326 domain-containing protein;protein_id=WP_011882299.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 5047 5838 . + . ID=gene-LDO50_RS22880;Name=LDO50_RS22880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22880;old_locus_tag=BVI1335_530005 NZ_CAJZAO010000331.1 Protein Homology CDS 5047 5838 . + 0 ID=cds-WP_011882298.1;Parent=gene-LDO50_RS22880;Dbxref=GenBank:WP_011882298.1;Name=WP_011882298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366132.1;locus_tag=LDO50_RS22880;product=DUF2182 domain-containing protein;protein_id=WP_011882298.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 5988 6452 . - . ID=gene-LDO50_RS22885;Name=LDO50_RS22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22885;old_locus_tag=BVI1335_530007 NZ_CAJZAO010000331.1 Protein Homology CDS 5988 6452 . - 0 ID=cds-WP_034195093.1;Parent=gene-LDO50_RS22885;Dbxref=GenBank:WP_034195093.1;Name=WP_034195093.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882286.1;locus_tag=LDO50_RS22885;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_034195093.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 6568 7206 . + . ID=gene-LDO50_RS22890;Name=LDO50_RS22890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22890;old_locus_tag=BVI1335_530008 NZ_CAJZAO010000331.1 Protein Homology CDS 6568 7206 . + 0 ID=cds-WP_224020152.1;Parent=gene-LDO50_RS22890;Dbxref=GenBank:WP_224020152.1;Name=WP_224020152.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724840.1;locus_tag=LDO50_RS22890;product=LysE family translocator;protein_id=WP_224020152.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 7287 9206 . - . ID=gene-LDO50_RS22895;Name=LDO50_RS22895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22895;old_locus_tag=BVI1335_530009 NZ_CAJZAO010000331.1 Protein Homology CDS 7287 9206 . - 0 ID=cds-WP_224020153.1;Parent=gene-LDO50_RS22895;Dbxref=GenBank:WP_224020153.1;Name=WP_224020153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751815.1;locus_tag=LDO50_RS22895;product=TonB-dependent receptor domain-containing protein;protein_id=WP_224020153.1;transl_table=11 NZ_CAJZAO010000331.1 cmsearch riboswitch 9417 9609 . - . ID=id-NZ_CAJZAO010000331.1:9417..9609;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAO010000331.1 RefSeq gene 9856 10833 . - . ID=gene-LDO50_RS22900;Name=LDO50_RS22900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22900;old_locus_tag=BVI1335_530010 NZ_CAJZAO010000331.1 Protein Homology CDS 9856 10833 . - 0 ID=cds-WP_011882283.1;Parent=gene-LDO50_RS22900;Dbxref=GenBank:WP_011882283.1;Name=WP_011882283.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882283.1;locus_tag=LDO50_RS22900;product=threo-3-hydroxy-L-aspartate ammonia-lyase;protein_id=WP_011882283.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 10879 11517 . - . ID=gene-LDO50_RS22905;Name=LDO50_RS22905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22905;old_locus_tag=BVI1335_530011 NZ_CAJZAO010000331.1 Protein Homology CDS 10879 11517 . - 0 ID=cds-WP_045577953.1;Parent=gene-LDO50_RS22905;Dbxref=GenBank:WP_045577953.1;Name=WP_045577953.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882282.1;locus_tag=LDO50_RS22905;product=helix-turn-helix transcriptional regulator;protein_id=WP_045577953.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 11514 12035 . - . ID=gene-LDO50_RS22910;Name=LDO50_RS22910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22910;old_locus_tag=BVI1335_530012 NZ_CAJZAO010000331.1 Protein Homology CDS 11514 12035 . - 0 ID=cds-WP_011882281.1;Parent=gene-LDO50_RS22910;Dbxref=GenBank:WP_011882281.1;Name=WP_011882281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724843.1;locus_tag=LDO50_RS22910;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_011882281.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 12441 14027 . + . ID=gene-LDO50_RS22915;Name=LDO50_RS22915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22915;old_locus_tag=BVI1335_530014 NZ_CAJZAO010000331.1 Protein Homology CDS 12441 14027 . + 0 ID=cds-WP_011882280.1;Parent=gene-LDO50_RS22915;Dbxref=GenBank:WP_011882280.1;Name=WP_011882280.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757553.1;locus_tag=LDO50_RS22915;product=isocitrate lyase;protein_id=WP_011882280.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 14708 16573 . + . ID=gene-LDO50_RS22920;Name=LDO50_RS22920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22920;old_locus_tag=BVI1335_530015 NZ_CAJZAO010000331.1 Protein Homology CDS 14708 16573 . + 0 ID=cds-WP_176043790.1;Parent=gene-LDO50_RS22920;Dbxref=GenBank:WP_176043790.1;Name=WP_176043790.1;Ontology_term=GO:0006094,GO:0004611,GO:0005525,GO:0017076;gbkey=CDS;go_function=phosphoenolpyruvate carboxykinase activity|0004611||IEA,GTP binding|0005525||IEA,purine nucleotide binding|0017076||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882279.1;locus_tag=LDO50_RS22920;product=phosphoenolpyruvate carboxykinase (GTP);protein_id=WP_176043790.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 16740 18404 . - . ID=gene-LDO50_RS22925;Name=LDO50_RS22925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22925;old_locus_tag=BVI1335_530016 NZ_CAJZAO010000331.1 Protein Homology CDS 16740 18404 . - 0 ID=cds-WP_224020154.1;Parent=gene-LDO50_RS22925;Dbxref=GenBank:WP_224020154.1;Name=WP_224020154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753586.1;locus_tag=LDO50_RS22925;product=acid phosphatase;protein_id=WP_224020154.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 19085 20491 . - . ID=gene-LDO50_RS22930;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=LDO50_RS22930;old_locus_tag=BVI1335_530018 NZ_CAJZAO010000331.1 Protein Homology CDS 19085 20491 . - 0 ID=cds-WP_014724847.1;Parent=gene-LDO50_RS22930;Dbxref=GenBank:WP_014724847.1;Name=WP_014724847.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899315.1;locus_tag=LDO50_RS22930;product=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming);protein_id=WP_014724847.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 20636 21046 . - . ID=gene-LDO50_RS22935;Name=LDO50_RS22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22935 NZ_CAJZAO010000331.1 GeneMarkS-2+ CDS 20636 21046 . - 0 ID=cds-WP_155625218.1;Parent=gene-LDO50_RS22935;Dbxref=GenBank:WP_155625218.1;Name=WP_155625218.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS22935;product=hypothetical protein;protein_id=WP_155625218.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 21322 23343 . - . ID=gene-LDO50_RS22940;Name=LDO50_RS22940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22940;old_locus_tag=BVI1335_530021 NZ_CAJZAO010000331.1 Protein Homology CDS 21322 23343 . - 0 ID=cds-WP_059559682.1;Parent=gene-LDO50_RS22940;Dbxref=GenBank:WP_059559682.1;Name=WP_059559682.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760343.1;locus_tag=LDO50_RS22940;product=TonB-dependent receptor;protein_id=WP_059559682.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 23819 24847 . + . ID=gene-LDO50_RS22945;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=LDO50_RS22945;old_locus_tag=BVI1335_530022 NZ_CAJZAO010000331.1 Protein Homology CDS 23819 24847 . + 0 ID=cds-WP_014724850.1;Parent=gene-LDO50_RS22945;Dbxref=GenBank:WP_014724850.1;Name=WP_014724850.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882274.1;locus_tag=LDO50_RS22945;product=alcohol dehydrogenase AdhP;protein_id=WP_014724850.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 24915 26399 . - . ID=gene-LDO50_RS22950;Name=LDO50_RS22950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22950;old_locus_tag=BVI1335_530023 NZ_CAJZAO010000331.1 Protein Homology CDS 24915 26399 . - 0 ID=cds-WP_224020155.1;Parent=gene-LDO50_RS22950;Dbxref=GenBank:WP_224020155.1;Name=WP_224020155.1;Ontology_term=GO:0005975,GO:0004308;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397007.1;locus_tag=LDO50_RS22950;product=sialidase family protein;protein_id=WP_224020155.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 26831 27262 . - . ID=gene-LDO50_RS22955;Name=LDO50_RS22955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22955;old_locus_tag=BVI1335_530025 NZ_CAJZAO010000331.1 Protein Homology CDS 26831 27262 . - 0 ID=cds-WP_175949040.1;Parent=gene-LDO50_RS22955;Dbxref=GenBank:WP_175949040.1;Name=WP_175949040.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882272.1;locus_tag=LDO50_RS22955;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_175949040.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 27259 28176 . - . ID=gene-LDO50_RS22960;Name=LDO50_RS22960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22960;old_locus_tag=BVI1335_530026 NZ_CAJZAO010000331.1 Protein Homology CDS 27259 28176 . - 0 ID=cds-WP_014724852.1;Parent=gene-LDO50_RS22960;Dbxref=GenBank:WP_014724852.1;Name=WP_014724852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882271.1;locus_tag=LDO50_RS22960;product=alpha/beta hydrolase family protein;protein_id=WP_014724852.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 28476 29441 . + . ID=gene-LDO50_RS22965;Name=LDO50_RS22965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22965;old_locus_tag=BVI1335_530027 NZ_CAJZAO010000331.1 Protein Homology CDS 28476 29441 . + 0 ID=cds-WP_224020156.1;Parent=gene-LDO50_RS22965;Dbxref=GenBank:WP_224020156.1;Name=WP_224020156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355131.1;locus_tag=LDO50_RS22965;product=ABC transporter substrate-binding protein;protein_id=WP_224020156.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 29717 30649 . - . ID=gene-LDO50_RS22970;Name=LDO50_RS22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22970;old_locus_tag=BVI1335_530028 NZ_CAJZAO010000331.1 Protein Homology CDS 29717 30649 . - 0 ID=cds-WP_224020157.1;Parent=gene-LDO50_RS22970;Dbxref=GenBank:WP_224020157.1;Name=WP_224020157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494830.1;locus_tag=LDO50_RS22970;product=ABC transporter substrate-binding protein;protein_id=WP_224020157.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 30684 32468 . - . ID=gene-LDO50_RS30895;Name=LDO50_RS30895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30895;old_locus_tag=BVI1335_530029 NZ_CAJZAO010000331.1 Protein Homology CDS 30684 32468 . - 0 ID=cds-WP_081055554.1;Parent=gene-LDO50_RS30895;Dbxref=GenBank:WP_081055554.1;Name=WP_081055554.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339942.1;locus_tag=LDO50_RS30895;product=amino acid ABC transporter permease/ATP-binding protein;protein_id=WP_081055554.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 32536 33894 . - . ID=gene-LDO50_RS22985;Name=LDO50_RS22985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22985;old_locus_tag=BVI1335_530030 NZ_CAJZAO010000331.1 Protein Homology CDS 32536 33894 . - 0 ID=cds-WP_224020158.1;Parent=gene-LDO50_RS22985;Dbxref=GenBank:WP_224020158.1;Name=WP_224020158.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355135.1;locus_tag=LDO50_RS22985;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_224020158.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 33902 34951 . - . ID=gene-LDO50_RS22990;Name=LDO50_RS22990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22990;old_locus_tag=BVI1335_530031 NZ_CAJZAO010000331.1 Protein Homology CDS 33902 34951 . - 0 ID=cds-WP_046426481.1;Parent=gene-LDO50_RS22990;Dbxref=GenBank:WP_046426481.1;Name=WP_046426481.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754408.1;locus_tag=LDO50_RS22990;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_046426481.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 34987 35928 . - . ID=gene-LDO50_RS22995;Name=LDO50_RS22995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS22995;old_locus_tag=BVI1335_530032 NZ_CAJZAO010000331.1 Protein Homology CDS 34987 35928 . - 0 ID=cds-WP_059696238.1;Parent=gene-LDO50_RS22995;Dbxref=GenBank:WP_059696238.1;Name=WP_059696238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899327.1;locus_tag=LDO50_RS22995;product=ABC transporter substrate-binding protein;protein_id=WP_059696238.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 35996 36556 . - . ID=gene-LDO50_RS23000;Name=LDO50_RS23000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23000;old_locus_tag=BVI1335_530033 NZ_CAJZAO010000331.1 Protein Homology CDS 35996 36556 . - 0 ID=cds-WP_224020159.1;Parent=gene-LDO50_RS23000;Dbxref=GenBank:WP_224020159.1;Name=WP_224020159.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413127.1;locus_tag=LDO50_RS23000;product=GNAT family N-acetyltransferase;protein_id=WP_224020159.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 36928 37611 . - . ID=gene-LDO50_RS23005;Name=LDO50_RS23005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23005;old_locus_tag=BVI1335_530034 NZ_CAJZAO010000331.1 Protein Homology CDS 36928 37611 . - 0 ID=cds-WP_059464107.1;Parent=gene-LDO50_RS23005;Dbxref=GenBank:WP_059464107.1;Name=WP_059464107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724859.1;locus_tag=LDO50_RS23005;product=hypothetical protein;protein_id=WP_059464107.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 37677 38711 . - . ID=gene-LDO50_RS23010;Name=LDO50_RS23010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23010;old_locus_tag=BVI1335_530035 NZ_CAJZAO010000331.1 Protein Homology CDS 37677 38711 . - 0 ID=cds-WP_059461037.1;Parent=gene-LDO50_RS23010;Dbxref=GenBank:WP_059461037.1;Name=WP_059461037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882262.1;locus_tag=LDO50_RS23010;product=succinylglutamate desuccinylase/aspartoacylase family protein;protein_id=WP_059461037.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 38919 39194 . - . ID=gene-LDO50_RS23015;Name=LDO50_RS23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23015;old_locus_tag=BVI1335_530036 NZ_CAJZAO010000331.1 Protein Homology CDS 38919 39194 . - 0 ID=cds-WP_045577962.1;Parent=gene-LDO50_RS23015;Dbxref=GenBank:WP_045577962.1;Name=WP_045577962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413125.1;locus_tag=LDO50_RS23015;product=hypothetical protein;protein_id=WP_045577962.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 39441 40994 . - . ID=gene-LDO50_RS23020;Name=LDO50_RS23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23020;old_locus_tag=BVI1335_530037 NZ_CAJZAO010000331.1 Protein Homology CDS 39441 40994 . - 0 ID=cds-WP_011882260.1;Parent=gene-LDO50_RS23020;Dbxref=GenBank:WP_011882260.1;Name=WP_011882260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658860.1;locus_tag=LDO50_RS23020;product=sensor domain-containing diguanylate cyclase;protein_id=WP_011882260.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 41529 41681 . - . ID=gene-LDO50_RS23025;Name=LDO50_RS23025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23025 NZ_CAJZAO010000331.1 Protein Homology CDS 41529 41681 . - 0 ID=cds-WP_014724861.1;Parent=gene-LDO50_RS23025;Dbxref=GenBank:WP_014724861.1;Name=WP_014724861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724861.1;locus_tag=LDO50_RS23025;product=hypothetical protein;protein_id=WP_014724861.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 42304 43449 . - . ID=gene-LDO50_RS23030;Name=LDO50_RS23030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23030;old_locus_tag=BVI1335_530039 NZ_CAJZAO010000331.1 Protein Homology CDS 42304 43449 . - 0 ID=cds-WP_371464382.1;Parent=gene-LDO50_RS23030;Dbxref=GenBank:WP_371464382.1;Name=WP_371464382.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335320.1;locus_tag=LDO50_RS23030;product=porin;protein_id=WP_371464382.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq pseudogene 43970 44547 . - . ID=gene-LDO50_RS23035;Name=LDO50_RS23035;end_range=44547,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS23035;partial=true;pseudo=true NZ_CAJZAO010000331.1 Protein Homology CDS 43970 44547 . - 0 ID=cds-LDO50_RS23035;Parent=gene-LDO50_RS23035;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=44547,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013341541.1;locus_tag=LDO50_RS23035;partial=true;product=zinc-binding dehydrogenase;pseudo=true;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 44731 44955 . - . ID=gene-LDO50_RS23040;Name=LDO50_RS23040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23040;old_locus_tag=BVI1335_530042 NZ_CAJZAO010000331.1 Protein Homology CDS 44731 44955 . - 0 ID=cds-WP_011882255.1;Parent=gene-LDO50_RS23040;Dbxref=GenBank:WP_011882255.1;Name=WP_011882255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753082.1;locus_tag=LDO50_RS23040;product=hypothetical protein;protein_id=WP_011882255.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 45225 45428 . - . ID=gene-LDO50_RS23045;Name=LDO50_RS23045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23045;old_locus_tag=BVI1335_530043 NZ_CAJZAO010000331.1 Protein Homology CDS 45225 45428 . - 0 ID=cds-WP_224020160.1;Parent=gene-LDO50_RS23045;Dbxref=GenBank:WP_224020160.1;Name=WP_224020160.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014252848.1;locus_tag=LDO50_RS23045;product=cold-shock protein;protein_id=WP_224020160.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 45653 45937 . + . ID=gene-LDO50_RS23050;Name=LDO50_RS23050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23050 NZ_CAJZAO010000331.1 GeneMarkS-2+ CDS 45653 45937 . + 0 ID=cds-WP_224020161.1;Parent=gene-LDO50_RS23050;Dbxref=GenBank:WP_224020161.1;Name=WP_224020161.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS23050;product=hypothetical protein;protein_id=WP_224020161.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 45934 46863 . + . ID=gene-LDO50_RS23055;Name=LDO50_RS23055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23055;old_locus_tag=BVI1335_530045 NZ_CAJZAO010000331.1 Protein Homology CDS 45934 46863 . + 0 ID=cds-WP_011882254.1;Parent=gene-LDO50_RS23055;Dbxref=GenBank:WP_011882254.1;Name=WP_011882254.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752883.1;locus_tag=LDO50_RS23055;product=TauD/TfdA dioxygenase family protein;protein_id=WP_011882254.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 46907 47962 . + . ID=gene-LDO50_RS23060;Name=LDO50_RS23060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23060;old_locus_tag=BVI1335_530046 NZ_CAJZAO010000331.1 Protein Homology CDS 46907 47962 . + 0 ID=cds-WP_011882253.1;Parent=gene-LDO50_RS23060;Dbxref=GenBank:WP_011882253.1;Name=WP_011882253.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752882.1;locus_tag=LDO50_RS23060;product=ABC transporter substrate-binding protein;protein_id=WP_011882253.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 48036 49031 . + . ID=gene-LDO50_RS23065;Name=LDO50_RS23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23065;old_locus_tag=BVI1335_530048 NZ_CAJZAO010000331.1 Protein Homology CDS 48036 49031 . + 0 ID=cds-WP_045577965.1;Parent=gene-LDO50_RS23065;Dbxref=GenBank:WP_045577965.1;Name=WP_045577965.1;Ontology_term=GO:0006810,GO:0005215,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545453.1;locus_tag=LDO50_RS23065;product=ABC transporter ATP-binding protein;protein_id=WP_045577965.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 49028 49915 . + . ID=gene-LDO50_RS23070;Name=LDO50_RS23070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23070;old_locus_tag=BVI1335_530049 NZ_CAJZAO010000331.1 Protein Homology CDS 49028 49915 . + 0 ID=cds-WP_045577966.1;Parent=gene-LDO50_RS23070;Dbxref=GenBank:WP_045577966.1;Name=WP_045577966.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481264.1;locus_tag=LDO50_RS23070;product=ABC transporter permease;protein_id=WP_045577966.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 50212 51621 . - . ID=gene-LDO50_RS23075;Name=LDO50_RS23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23075;old_locus_tag=BVI1335_530050 NZ_CAJZAO010000331.1 Protein Homology CDS 50212 51621 . - 0 ID=cds-WP_224020162.1;Parent=gene-LDO50_RS23075;Dbxref=GenBank:WP_224020162.1;Name=WP_224020162.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882250.1;locus_tag=LDO50_RS23075;product=aminotransferase-like domain-containing protein;protein_id=WP_224020162.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 51833 52015 . + . ID=gene-LDO50_RS23080;Name=LDO50_RS23080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23080;old_locus_tag=BVI1335_530051 NZ_CAJZAO010000331.1 GeneMarkS-2+ CDS 51833 52015 . + 0 ID=cds-WP_126220849.1;Parent=gene-LDO50_RS23080;Dbxref=GenBank:WP_126220849.1;Name=WP_126220849.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS23080;product=hypothetical protein;protein_id=WP_126220849.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 52139 52780 . + . ID=gene-LDO50_RS23085;Name=LDO50_RS23085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23085;old_locus_tag=BVI1335_530052 NZ_CAJZAO010000331.1 Protein Homology CDS 52139 52780 . + 0 ID=cds-WP_011882249.1;Parent=gene-LDO50_RS23085;Dbxref=GenBank:WP_011882249.1;Name=WP_011882249.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882249.1;locus_tag=LDO50_RS23085;product=LysE family translocator;protein_id=WP_011882249.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq pseudogene 52786 52949 . - . ID=gene-LDO50_RS31000;Name=LDO50_RS31000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31000;old_locus_tag=BVI1335_530053;partial=true;pseudo=true;start_range=.,52786 NZ_CAJZAO010000331.1 Protein Homology CDS 52786 52949 . - 0 ID=cds-LDO50_RS31000;Parent=gene-LDO50_RS31000;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336742.1;locus_tag=LDO50_RS31000;partial=true;product=ISNCY family transposase;pseudo=true;start_range=.,52786;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 53175 54620 . - . ID=gene-LDO50_RS23095;Name=LDO50_RS23095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23095;old_locus_tag=BVI1335_530054 NZ_CAJZAO010000331.1 Protein Homology CDS 53175 54620 . - 0 ID=cds-WP_011882248.1;Parent=gene-LDO50_RS23095;Dbxref=GenBank:WP_011882248.1;Name=WP_011882248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397042.1;locus_tag=LDO50_RS23095;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_011882248.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 54778 56094 . - . ID=gene-LDO50_RS23100;Name=LDO50_RS23100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23100;old_locus_tag=BVI1335_530055 NZ_CAJZAO010000331.1 Protein Homology CDS 54778 56094 . - 0 ID=cds-WP_224020163.1;Parent=gene-LDO50_RS23100;Dbxref=GenBank:WP_224020163.1;Name=WP_224020163.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882247.1;locus_tag=LDO50_RS23100;product=c-type cytochrome;protein_id=WP_224020163.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 56109 58328 . - . ID=gene-LDO50_RS23105;Name=LDO50_RS23105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23105;old_locus_tag=BVI1335_530056 NZ_CAJZAO010000331.1 Protein Homology CDS 56109 58328 . - 0 ID=cds-WP_034195072.1;Parent=gene-LDO50_RS23105;Dbxref=GenBank:WP_034195072.1;Name=WP_034195072.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899380.1;locus_tag=LDO50_RS23105;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;protein_id=WP_034195072.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 58330 58785 . - . ID=gene-LDO50_RS23110;Name=LDO50_RS23110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23110;old_locus_tag=BVI1335_530057 NZ_CAJZAO010000331.1 Protein Homology CDS 58330 58785 . - 0 ID=cds-WP_011882245.1;Parent=gene-LDO50_RS23110;Dbxref=GenBank:WP_011882245.1;Name=WP_011882245.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882245.1;locus_tag=LDO50_RS23110;product=(2Fe-2S)-binding protein;protein_id=WP_011882245.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 58929 59228 . - . ID=gene-LDO50_RS23115;Name=LDO50_RS23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23115;old_locus_tag=BVI1335_530058 NZ_CAJZAO010000331.1 Protein Homology CDS 58929 59228 . - 0 ID=cds-WP_011882244.1;Parent=gene-LDO50_RS23115;Dbxref=GenBank:WP_011882244.1;Name=WP_011882244.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479020.1;locus_tag=LDO50_RS23115;product=putative quinol monooxygenase;protein_id=WP_011882244.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 59314 60372 . - . ID=gene-LDO50_RS23120;Name=LDO50_RS23120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23120;old_locus_tag=BVI1335_530059 NZ_CAJZAO010000331.1 Protein Homology CDS 59314 60372 . - 0 ID=cds-WP_059567823.1;Parent=gene-LDO50_RS23120;Dbxref=GenBank:WP_059567823.1;Name=WP_059567823.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724874.1;locus_tag=LDO50_RS23120;product=NADP-dependent oxidoreductase;protein_id=WP_059567823.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 60560 61180 . - . ID=gene-LDO50_RS23125;Name=LDO50_RS23125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23125;old_locus_tag=BVI1335_530060 NZ_CAJZAO010000331.1 Protein Homology CDS 60560 61180 . - 0 ID=cds-WP_034195070.1;Parent=gene-LDO50_RS23125;Dbxref=GenBank:WP_034195070.1;Name=WP_034195070.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882242.1;locus_tag=LDO50_RS23125;product=TetR/AcrR family transcriptional regulator;protein_id=WP_034195070.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 61382 64543 . - . ID=gene-LDO50_RS23130;Name=LDO50_RS23130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23130;old_locus_tag=BVI1335_530061 NZ_CAJZAO010000331.1 Protein Homology CDS 61382 64543 . - 0 ID=cds-WP_224020164.1;Parent=gene-LDO50_RS23130;Dbxref=GenBank:WP_224020164.1;Name=WP_224020164.1;Ontology_term=GO:0042908,GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882241.1;locus_tag=LDO50_RS23130;product=multidrug efflux RND transporter permease subunit;protein_id=WP_224020164.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 64686 66335 . - . ID=gene-LDO50_RS23135;Name=LDO50_RS23135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23135;old_locus_tag=BVI1335_530062 NZ_CAJZAO010000331.1 Protein Homology CDS 64686 66335 . - 0 ID=cds-WP_060082341.1;Parent=gene-LDO50_RS23135;Dbxref=GenBank:WP_060082341.1;Name=WP_060082341.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882240.1;locus_tag=LDO50_RS23135;product=ABC transporter ATP-binding protein;protein_id=WP_060082341.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 66332 67465 . - . ID=gene-LDO50_RS23140;Name=LDO50_RS23140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23140;old_locus_tag=BVI1335_530063 NZ_CAJZAO010000331.1 Protein Homology CDS 66332 67465 . - 0 ID=cds-WP_212183635.1;Parent=gene-LDO50_RS23140;Dbxref=GenBank:WP_212183635.1;Name=WP_212183635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012432480.1;locus_tag=LDO50_RS23140;product=ABC transporter permease;protein_id=WP_212183635.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 67419 68471 . - . ID=gene-LDO50_RS23145;Name=LDO50_RS23145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23145;old_locus_tag=BVI1335_530064 NZ_CAJZAO010000331.1 Protein Homology CDS 67419 68471 . - 0 ID=cds-WP_011882238.1;Parent=gene-LDO50_RS23145;Dbxref=GenBank:WP_011882238.1;Name=WP_011882238.1;Ontology_term=GO:0042884,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=microcin transport|0042884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006475984.1;locus_tag=LDO50_RS23145;product=microcin C ABC transporter permease YejB;protein_id=WP_011882238.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 68485 70407 . - . ID=gene-LDO50_RS23150;Name=LDO50_RS23150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23150;old_locus_tag=BVI1335_530065 NZ_CAJZAO010000331.1 Protein Homology CDS 68485 70407 . - 0 ID=cds-WP_155416639.1;Parent=gene-LDO50_RS23150;Dbxref=GenBank:WP_155416639.1;Name=WP_155416639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724879.1;locus_tag=LDO50_RS23150;product=extracellular solute-binding protein;protein_id=WP_155416639.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 70582 73407 . - . ID=gene-LDO50_RS23155;Name=LDO50_RS23155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23155;old_locus_tag=BVI1335_530066 NZ_CAJZAO010000331.1 Protein Homology CDS 70582 73407 . - 0 ID=cds-WP_224020165.1;Parent=gene-LDO50_RS23155;Dbxref=GenBank:WP_224020165.1;Name=WP_224020165.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882236.1;locus_tag=LDO50_RS23155;product=TonB-dependent receptor;protein_id=WP_224020165.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 73753 74328 . - . ID=gene-LDO50_RS23160;Name=LDO50_RS23160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23160;old_locus_tag=BVI1335_530067 NZ_CAJZAO010000331.1 Protein Homology CDS 73753 74328 . - 0 ID=cds-WP_011882235.1;Parent=gene-LDO50_RS23160;Dbxref=GenBank:WP_011882235.1;Name=WP_011882235.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882235.1;locus_tag=LDO50_RS23160;product=helix-turn-helix domain-containing protein;protein_id=WP_011882235.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 74628 75818 . - . ID=gene-LDO50_RS23165;Name=LDO50_RS23165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23165;old_locus_tag=BVI1335_530068 NZ_CAJZAO010000331.1 Protein Homology CDS 74628 75818 . - 0 ID=cds-WP_175899115.1;Parent=gene-LDO50_RS23165;Dbxref=GenBank:WP_175899115.1;Name=WP_175899115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492636.1;locus_tag=LDO50_RS23165;product=tetratricopeptide repeat protein;protein_id=WP_175899115.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 75835 76266 . - . ID=gene-LDO50_RS23170;Name=LDO50_RS23170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23170;old_locus_tag=BVI1335_530069 NZ_CAJZAO010000331.1 Protein Homology CDS 75835 76266 . - 0 ID=cds-WP_011882233.1;Parent=gene-LDO50_RS23170;Dbxref=GenBank:WP_011882233.1;Name=WP_011882233.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328556.1;locus_tag=LDO50_RS23170;product=ExbD/TolR family protein;protein_id=WP_011882233.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 76348 76770 . - . ID=gene-LDO50_RS23175;Name=LDO50_RS23175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23175;old_locus_tag=BVI1335_530070 NZ_CAJZAO010000331.1 Protein Homology CDS 76348 76770 . - 0 ID=cds-WP_011882232.1;Parent=gene-LDO50_RS23175;Dbxref=GenBank:WP_011882232.1;Name=WP_011882232.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017777874.1;locus_tag=LDO50_RS23175;product=ExbD/TolR family protein;protein_id=WP_011882232.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 76791 77696 . - . ID=gene-LDO50_RS23180;Name=LDO50_RS23180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23180;old_locus_tag=BVI1335_530071 NZ_CAJZAO010000331.1 Protein Homology CDS 76791 77696 . - 0 ID=cds-WP_224020166.1;Parent=gene-LDO50_RS23180;Dbxref=GenBank:WP_224020166.1;Name=WP_224020166.1;Ontology_term=GO:0015031,GO:0015252,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=proton channel activity|0015252||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328557.1;locus_tag=LDO50_RS23180;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_224020166.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 77783 78481 . - . ID=gene-LDO50_RS23185;Name=LDO50_RS23185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23185;old_locus_tag=BVI1335_530072 NZ_CAJZAO010000331.1 Protein Homology CDS 77783 78481 . - 0 ID=cds-WP_224020167.1;Parent=gene-LDO50_RS23185;Dbxref=GenBank:WP_224020167.1;Name=WP_224020167.1;Ontology_term=GO:0015031,GO:0015891,GO:0055085,GO:0031992,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=energy transducer activity|0031992||IEA;go_process=protein transport|0015031||IEA,siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481523.1;locus_tag=LDO50_RS23185;product=energy transducer TonB;protein_id=WP_224020167.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 78631 78951 . - . ID=gene-LDO50_RS23190;Name=LDO50_RS23190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23190 NZ_CAJZAO010000331.1 GeneMarkS-2+ CDS 78631 78951 . - 0 ID=cds-WP_131754177.1;Parent=gene-LDO50_RS23190;Dbxref=GenBank:WP_131754177.1;Name=WP_131754177.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS23190;product=hypothetical protein;protein_id=WP_131754177.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 79649 80584 . - . ID=gene-LDO50_RS23195;Name=LDO50_RS23195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23195;old_locus_tag=BVI1335_530075 NZ_CAJZAO010000331.1 Protein Homology CDS 79649 80584 . - 0 ID=cds-WP_011882227.1;Parent=gene-LDO50_RS23195;Dbxref=GenBank:WP_011882227.1;Name=WP_011882227.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882227.1;locus_tag=LDO50_RS23195;product=LysR family transcriptional regulator;protein_id=WP_011882227.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 80959 82395 . + . ID=gene-LDO50_RS23200;Name=LDO50_RS23200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23200;old_locus_tag=BVI1335_530076 NZ_CAJZAO010000331.1 Protein Homology CDS 80959 82395 . + 0 ID=cds-WP_014724883.1;Parent=gene-LDO50_RS23200;Dbxref=GenBank:WP_014724883.1;Name=WP_014724883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724883.1;locus_tag=LDO50_RS23200;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_014724883.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 82408 82785 . + . ID=gene-LDO50_RS23205;Name=LDO50_RS23205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23205;old_locus_tag=BVI1335_530077 NZ_CAJZAO010000331.1 Protein Homology CDS 82408 82785 . + 0 ID=cds-WP_011882225.1;Parent=gene-LDO50_RS23205;Dbxref=GenBank:WP_011882225.1;Name=WP_011882225.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882225.1;locus_tag=LDO50_RS23205;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_011882225.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 82782 83777 . + . ID=gene-LDO50_RS23210;Name=LDO50_RS23210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23210;old_locus_tag=BVI1335_530078 NZ_CAJZAO010000331.1 Protein Homology CDS 82782 83777 . + 0 ID=cds-WP_034193544.1;Parent=gene-LDO50_RS23210;Dbxref=GenBank:WP_034193544.1;Name=WP_034193544.1;Ontology_term=GO:0003960,GO:0048038,GO:0070402;gbkey=CDS;go_function=quinone reductase (NADPH) activity|0003960||IEA,quinone binding|0048038||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882224.1;locus_tag=LDO50_RS23210;product=NAD(P)H-quinone oxidoreductase;protein_id=WP_034193544.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 83988 84188 . - . ID=gene-LDO50_RS23215;Name=LDO50_RS23215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23215 NZ_CAJZAO010000331.1 GeneMarkS-2+ CDS 83988 84188 . - 0 ID=cds-WP_043292230.1;Parent=gene-LDO50_RS23215;Dbxref=GenBank:WP_043292230.1;Name=WP_043292230.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS23215;product=hypothetical protein;protein_id=WP_043292230.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 84233 85450 . - . ID=gene-LDO50_RS23220;Name=LDO50_RS23220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23220;old_locus_tag=BVI1335_530079 NZ_CAJZAO010000331.1 Protein Homology CDS 84233 85450 . - 0 ID=cds-WP_224020179.1;Parent=gene-LDO50_RS23220;Dbxref=GenBank:WP_224020179.1;Name=WP_224020179.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014252249.1;locus_tag=LDO50_RS23220;product=MFS transporter;protein_id=WP_224020179.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 85698 86795 . - . ID=gene-LDO50_RS23225;Name=LDO50_RS23225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23225;old_locus_tag=BVI1335_530080 NZ_CAJZAO010000331.1 Protein Homology CDS 85698 86795 . - 0 ID=cds-WP_011882222.1;Parent=gene-LDO50_RS23225;Dbxref=GenBank:WP_011882222.1;Name=WP_011882222.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882222.1;locus_tag=LDO50_RS23225;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_011882222.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 87143 88243 . + . ID=gene-LDO50_RS23230;Name=LDO50_RS23230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23230;old_locus_tag=BVI1335_530081 NZ_CAJZAO010000331.1 Protein Homology CDS 87143 88243 . + 0 ID=cds-WP_014724886.1;Parent=gene-LDO50_RS23230;Dbxref=GenBank:WP_014724886.1;Name=WP_014724886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724886.1;locus_tag=LDO50_RS23230;product=DUF1611 domain-containing protein;protein_id=WP_014724886.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 88311 89693 . + . ID=gene-LDO50_RS23235;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=LDO50_RS23235;old_locus_tag=BVI1335_530082 NZ_CAJZAO010000331.1 Protein Homology CDS 88311 89693 . + 0 ID=cds-WP_224020168.1;Parent=gene-LDO50_RS23235;Dbxref=GenBank:WP_224020168.1;Name=WP_224020168.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882219.1;locus_tag=LDO50_RS23235;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_224020168.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 89712 90587 . + . ID=gene-LDO50_RS23240;Name=LDO50_RS23240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23240;old_locus_tag=BVI1335_530083 NZ_CAJZAO010000331.1 Protein Homology CDS 89712 90587 . + 0 ID=cds-WP_011882218.1;Parent=gene-LDO50_RS23240;Dbxref=GenBank:WP_011882218.1;Name=WP_011882218.1;Ontology_term=GO:0046872,GO:0051213;gbkey=CDS;go_function=metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882218.1;locus_tag=LDO50_RS23240;product=phytanoyl-CoA dioxygenase family protein;protein_id=WP_011882218.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 90602 91729 . + . ID=gene-LDO50_RS23245;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=LDO50_RS23245;old_locus_tag=BVI1335_530084 NZ_CAJZAO010000331.1 Protein Homology CDS 90602 91729 . + 0 ID=cds-WP_034193541.1;Parent=gene-LDO50_RS23245;Dbxref=GenBank:WP_034193541.1;Name=WP_034193541.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724888.1;locus_tag=LDO50_RS23245;product=histidinol-phosphate transaminase;protein_id=WP_034193541.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 91726 92970 . + . ID=gene-LDO50_RS23250;Name=LDO50_RS23250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23250;old_locus_tag=BVI1335_530085 NZ_CAJZAO010000331.1 Protein Homology CDS 91726 92970 . + 0 ID=cds-WP_224020169.1;Parent=gene-LDO50_RS23250;Dbxref=GenBank:WP_224020169.1;Name=WP_224020169.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882216.1;locus_tag=LDO50_RS23250;product=ATP-grasp domain-containing protein;protein_id=WP_224020169.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 92981 94342 . + . ID=gene-LDO50_RS23255;Name=LDO50_RS23255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23255;old_locus_tag=BVI1335_530086 NZ_CAJZAO010000331.1 Protein Homology CDS 92981 94342 . + 0 ID=cds-WP_224020170.1;Parent=gene-LDO50_RS23255;Dbxref=GenBank:WP_224020170.1;Name=WP_224020170.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882215.1;locus_tag=LDO50_RS23255;product=ATP-grasp domain-containing protein;protein_id=WP_224020170.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 94339 95082 . + . ID=gene-LDO50_RS23260;Name=LDO50_RS23260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23260;old_locus_tag=BVI1335_530087 NZ_CAJZAO010000331.1 Protein Homology CDS 94339 95082 . + 0 ID=cds-WP_011882214.1;Parent=gene-LDO50_RS23260;Dbxref=GenBank:WP_011882214.1;Name=WP_011882214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882214.1;locus_tag=LDO50_RS23260;product=iron-containing redox enzyme family protein;protein_id=WP_011882214.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 95104 95385 . + . ID=gene-LDO50_RS23265;Name=LDO50_RS23265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23265;old_locus_tag=BVI1335_530088 NZ_CAJZAO010000331.1 Protein Homology CDS 95104 95385 . + 0 ID=cds-WP_011882213.1;Parent=gene-LDO50_RS23265;Dbxref=GenBank:WP_011882213.1;Name=WP_011882213.1;Ontology_term=GO:0009055,GO:0051537;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882213.1;locus_tag=LDO50_RS23265;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_011882213.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 95399 95992 . + . ID=gene-LDO50_RS23270;Name=ssuE;gbkey=Gene;gene=ssuE;gene_biotype=protein_coding;locus_tag=LDO50_RS23270;old_locus_tag=BVI1335_530089 NZ_CAJZAO010000331.1 Protein Homology CDS 95399 95992 . + 0 ID=cds-WP_011882212.1;Parent=gene-LDO50_RS23270;Dbxref=GenBank:WP_011882212.1;Name=WP_011882212.1;Ontology_term=GO:0046306,GO:0008752;gbkey=CDS;gene=ssuE;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA;go_process=alkanesulfonate catabolic process|0046306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882212.1;locus_tag=LDO50_RS23270;product=NADPH-dependent FMN reductase;protein_id=WP_011882212.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 95982 96965 . - . ID=gene-LDO50_RS23275;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=LDO50_RS23275;old_locus_tag=BVI1335_530090 NZ_CAJZAO010000331.1 Protein Homology CDS 95982 96965 . - 0 ID=cds-WP_224020171.1;Parent=gene-LDO50_RS23275;Dbxref=GenBank:WP_224020171.1;Name=WP_224020171.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724891.1;locus_tag=LDO50_RS23275;product=HTH-type transcriptional regulator ArgP;protein_id=WP_224020171.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 97393 97893 . - . ID=gene-LDO50_RS23280;Name=LDO50_RS23280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23280;old_locus_tag=BVI1335_530092 NZ_CAJZAO010000331.1 Protein Homology CDS 97393 97893 . - 0 ID=cds-WP_034193539.1;Parent=gene-LDO50_RS23280;Dbxref=GenBank:WP_034193539.1;Name=WP_034193539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724892.1;locus_tag=LDO50_RS23280;product=lipocalin-like domain-containing protein;protein_id=WP_034193539.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 98052 98942 . + . ID=gene-LDO50_RS23285;Name=LDO50_RS23285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23285;old_locus_tag=BVI1335_530093 NZ_CAJZAO010000331.1 Protein Homology CDS 98052 98942 . + 0 ID=cds-WP_224020180.1;Parent=gene-LDO50_RS23285;Dbxref=GenBank:WP_224020180.1;Name=WP_224020180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724893.1;locus_tag=LDO50_RS23285;product=LysR substrate-binding domain-containing protein;protein_id=WP_224020180.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 99225 99629 . + . ID=gene-LDO50_RS23290;Name=LDO50_RS23290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23290;old_locus_tag=BVI1335_530094 NZ_CAJZAO010000331.1 Protein Homology CDS 99225 99629 . + 0 ID=cds-WP_224020172.1;Parent=gene-LDO50_RS23290;Dbxref=GenBank:WP_224020172.1;Name=WP_224020172.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403534.1;locus_tag=LDO50_RS23290;product=helix-turn-helix transcriptional regulator;protein_id=WP_224020172.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 99632 100963 . + . ID=gene-LDO50_RS23295;Name=LDO50_RS23295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23295;old_locus_tag=BVI1335_530095 NZ_CAJZAO010000331.1 Protein Homology CDS 99632 100963 . + 0 ID=cds-WP_176300033.1;Parent=gene-LDO50_RS23295;Dbxref=GenBank:WP_176300033.1;Name=WP_176300033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882207.1;locus_tag=LDO50_RS23295;product=type II toxin-antitoxin system HipA family toxin;protein_id=WP_176300033.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 101272 102399 . - . ID=gene-LDO50_RS23300;Name=LDO50_RS23300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23300;old_locus_tag=BVI1335_530096 NZ_CAJZAO010000331.1 Protein Homology CDS 101272 102399 . - 0 ID=cds-WP_011882206.1;Parent=gene-LDO50_RS23300;Dbxref=GenBank:WP_011882206.1;Name=WP_011882206.1;Ontology_term=GO:0009072,GO:0003868,GO:0016701;gbkey=CDS;go_function=4-hydroxyphenylpyruvate dioxygenase activity|0003868||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen|0016701||IEA;go_process=aromatic amino acid metabolic process|0009072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658813.1;locus_tag=LDO50_RS23300;product=4-hydroxyphenylpyruvate dioxygenase family protein;protein_id=WP_011882206.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 102753 104060 . + . ID=gene-LDO50_RS23305;Name=shiA;gbkey=Gene;gene=shiA;gene_biotype=protein_coding;locus_tag=LDO50_RS23305;old_locus_tag=BVI1335_530097 NZ_CAJZAO010000331.1 Protein Homology CDS 102753 104060 . + 0 ID=cds-WP_034193537.1;Parent=gene-LDO50_RS23305;Dbxref=GenBank:WP_034193537.1;Name=WP_034193537.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=shiA;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355229.1;locus_tag=LDO50_RS23305;product=shikimate transporter;protein_id=WP_034193537.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 104286 105587 . + . ID=gene-LDO50_RS23310;Name=LDO50_RS23310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23310;old_locus_tag=BVI1335_530098 NZ_CAJZAO010000331.1 Protein Homology CDS 104286 105587 . + 0 ID=cds-WP_224020173.1;Parent=gene-LDO50_RS23310;Dbxref=GenBank:WP_224020173.1;Name=WP_224020173.1;Ontology_term=GO:0007049,GO:0008360,GO:0009252,GO:0019277,GO:0051301,GO:0071555,GO:0008760;gbkey=CDS;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=cell cycle|0007049||IEA,regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198657.1;locus_tag=LDO50_RS23310;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_224020173.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 105769 106539 . + . ID=gene-LDO50_RS23315;Name=LDO50_RS23315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23315;old_locus_tag=BVI1335_530099 NZ_CAJZAO010000331.1 Protein Homology CDS 105769 106539 . + 0 ID=cds-WP_011882203.1;Parent=gene-LDO50_RS23315;Dbxref=GenBank:WP_011882203.1;Name=WP_011882203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899400.1;locus_tag=LDO50_RS23315;product=IclR family transcriptional regulator domain-containing protein;protein_id=WP_011882203.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 106564 108873 . - . ID=gene-LDO50_RS23320;Name=LDO50_RS23320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23320;old_locus_tag=BVI1335_530100 NZ_CAJZAO010000331.1 Protein Homology CDS 106564 108873 . - 0 ID=cds-WP_034193536.1;Parent=gene-LDO50_RS23320;Dbxref=GenBank:WP_034193536.1;Name=WP_034193536.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355233.1;locus_tag=LDO50_RS23320;product=ATP-dependent DNA helicase;protein_id=WP_034193536.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 108870 110567 . - . ID=gene-LDO50_RS23325;Name=LDO50_RS23325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23325;old_locus_tag=BVI1335_530101 NZ_CAJZAO010000331.1 Protein Homology CDS 108870 110567 . - 0 ID=cds-WP_011882201.1;Parent=gene-LDO50_RS23325;Dbxref=GenBank:WP_011882201.1;Name=WP_011882201.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012340033.1;locus_tag=LDO50_RS23325;product=VRR-NUC domain-containing protein;protein_id=WP_011882201.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 110677 111555 . - . ID=gene-LDO50_RS23330;Name=LDO50_RS23330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23330;old_locus_tag=BVI1335_530102 NZ_CAJZAO010000331.1 Protein Homology CDS 110677 111555 . - 0 ID=cds-WP_011882200.1;Parent=gene-LDO50_RS23330;Dbxref=GenBank:WP_011882200.1;Name=WP_011882200.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658806.1;locus_tag=LDO50_RS23330;product=MipA/OmpV family protein;protein_id=WP_011882200.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 111777 112088 . - . ID=gene-LDO50_RS23335;Name=LDO50_RS23335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23335;old_locus_tag=BVI1335_530103 NZ_CAJZAO010000331.1 Protein Homology CDS 111777 112088 . - 0 ID=cds-WP_011882199.1;Parent=gene-LDO50_RS23335;Dbxref=GenBank:WP_011882199.1;Name=WP_011882199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750981.1;locus_tag=LDO50_RS23335;product=hypothetical protein;protein_id=WP_011882199.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 113391 113822 . + . ID=gene-LDO50_RS23340;Name=LDO50_RS23340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23340;old_locus_tag=BVI1335_530104 NZ_CAJZAO010000331.1 Protein Homology CDS 113391 113822 . + 0 ID=cds-WP_011882196.1;Parent=gene-LDO50_RS23340;Dbxref=GenBank:WP_011882196.1;Name=WP_011882196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899408.1;locus_tag=LDO50_RS23340;product=CBS domain-containing protein;protein_id=WP_011882196.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 113870 114376 . + . ID=gene-LDO50_RS23345;Name=LDO50_RS23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23345;old_locus_tag=BVI1335_530105 NZ_CAJZAO010000331.1 Protein Homology CDS 113870 114376 . + 0 ID=cds-WP_176154156.1;Parent=gene-LDO50_RS23345;Dbxref=GenBank:WP_176154156.1;Name=WP_176154156.1;Ontology_term=GO:0019684,GO:0009055;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;go_process=photosynthesis%2C light reaction|0019684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724906.1;locus_tag=LDO50_RS23345;product=PRC-barrel domain-containing protein;protein_id=WP_176154156.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 114392 115033 . - . ID=gene-LDO50_RS23350;Name=LDO50_RS23350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23350;old_locus_tag=BVI1335_530106 NZ_CAJZAO010000331.1 Protein Homology CDS 114392 115033 . - 0 ID=cds-WP_046426557.1;Parent=gene-LDO50_RS23350;Dbxref=GenBank:WP_046426557.1;Name=WP_046426557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882194.1;locus_tag=LDO50_RS23350;product=DUF4142 domain-containing protein;protein_id=WP_046426557.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 115289 115705 . - . ID=gene-LDO50_RS23355;Name=LDO50_RS23355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23355;old_locus_tag=BVI1335_530107 NZ_CAJZAO010000331.1 Protein Homology CDS 115289 115705 . - 0 ID=cds-WP_034193559.1;Parent=gene-LDO50_RS23355;Dbxref=GenBank:WP_034193559.1;Name=WP_034193559.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491223.1;locus_tag=LDO50_RS23355;product=BON domain-containing protein;protein_id=WP_034193559.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 115742 117730 . - . ID=gene-LDO50_RS23360;Name=LDO50_RS23360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23360;old_locus_tag=BVI1335_530109 NZ_CAJZAO010000331.1 Protein Homology CDS 115742 117730 . - 0 ID=cds-WP_224020174.1;Parent=gene-LDO50_RS23360;Dbxref=GenBank:WP_224020174.1;Name=WP_224020174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882192.1;locus_tag=LDO50_RS23360;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_224020174.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq pseudogene 118073 119119 . + . ID=gene-LDO50_RS23365;Name=LDO50_RS23365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS23365;old_locus_tag=BVI1335_530111;pseudo=true NZ_CAJZAO010000331.1 Protein Homology CDS 118073 119119 . + 0 ID=cds-LDO50_RS23365;Parent=gene-LDO50_RS23365;Note=frameshifted;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760833.1;locus_tag=LDO50_RS23365;product=sigma-54 interaction domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 119149 120948 . - . ID=gene-LDO50_RS23370;Name=LDO50_RS23370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23370;old_locus_tag=BVI1335_530112 NZ_CAJZAO010000331.1 Protein Homology CDS 119149 120948 . - 0 ID=cds-WP_014724910.1;Parent=gene-LDO50_RS23370;Dbxref=GenBank:WP_014724910.1;Name=WP_014724910.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355245.1;locus_tag=LDO50_RS23370;product=methyl-accepting chemotaxis protein;protein_id=WP_014724910.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 121121 121375 . - . ID=gene-LDO50_RS23375;Name=LDO50_RS23375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23375;old_locus_tag=BVI1335_530113 NZ_CAJZAO010000331.1 Protein Homology CDS 121121 121375 . - 0 ID=cds-WP_011882189.1;Parent=gene-LDO50_RS23375;Dbxref=GenBank:WP_011882189.1;Name=WP_011882189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882189.1;locus_tag=LDO50_RS23375;product=DUF3562 domain-containing protein;protein_id=WP_011882189.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 121988 122398 . + . ID=gene-LDO50_RS23380;Name=LDO50_RS23380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23380;old_locus_tag=BVI1335_530115 NZ_CAJZAO010000331.1 Protein Homology CDS 121988 122398 . + 0 ID=cds-WP_011882187.1;Parent=gene-LDO50_RS23380;Dbxref=GenBank:WP_011882187.1;Name=WP_011882187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882187.1;locus_tag=LDO50_RS23380;product=hypothetical protein;protein_id=WP_011882187.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 122863 123798 . - . ID=gene-LDO50_RS23385;Name=LDO50_RS23385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23385;old_locus_tag=BVI1335_530116 NZ_CAJZAO010000331.1 Protein Homology CDS 122863 123798 . - 0 ID=cds-WP_224020175.1;Parent=gene-LDO50_RS23385;Dbxref=GenBank:WP_224020175.1;Name=WP_224020175.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882186.1;locus_tag=LDO50_RS23385;product=universal stress protein;protein_id=WP_224020175.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 124154 124783 . - . ID=gene-LDO50_RS23390;Name=LDO50_RS23390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23390;old_locus_tag=BVI1335_530118 NZ_CAJZAO010000331.1 Protein Homology CDS 124154 124783 . - 0 ID=cds-WP_224020176.1;Parent=gene-LDO50_RS23390;Dbxref=GenBank:WP_224020176.1;Name=WP_224020176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724914.1;locus_tag=LDO50_RS23390;product=hypothetical protein;protein_id=WP_224020176.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 125870 126901 . - . ID=gene-LDO50_RS23395;Name=LDO50_RS23395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23395;old_locus_tag=BVI1335_530120 NZ_CAJZAO010000331.1 Protein Homology CDS 125870 126901 . - 0 ID=cds-WP_014724915.1;Parent=gene-LDO50_RS23395;Dbxref=GenBank:WP_014724915.1;Name=WP_014724915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012340050.1;locus_tag=LDO50_RS23395;product=DedA family protein/thiosulfate sulfurtransferase GlpE;protein_id=WP_014724915.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 127053 127559 . - . ID=gene-LDO50_RS23400;Name=LDO50_RS23400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23400;old_locus_tag=BVI1335_530121 NZ_CAJZAO010000331.1 Protein Homology CDS 127053 127559 . - 0 ID=cds-WP_014724916.1;Parent=gene-LDO50_RS23400;Dbxref=GenBank:WP_014724916.1;Name=WP_014724916.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366041.1;locus_tag=LDO50_RS23400;product=cupin domain-containing protein;protein_id=WP_014724916.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 127899 128363 . - . ID=gene-LDO50_RS23405;Name=LDO50_RS23405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23405;old_locus_tag=BVI1335_530122 NZ_CAJZAO010000331.1 Protein Homology CDS 127899 128363 . - 0 ID=cds-WP_011882181.1;Parent=gene-LDO50_RS23405;Dbxref=GenBank:WP_011882181.1;Name=WP_011882181.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882181.1;locus_tag=LDO50_RS23405;product=universal stress protein;protein_id=WP_011882181.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 128671 130764 . + . ID=gene-LDO50_RS23410;Name=LDO50_RS23410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23410;old_locus_tag=BVI1335_530123 NZ_CAJZAO010000331.1 Protein Homology CDS 128671 130764 . + 0 ID=cds-WP_046426567.1;Parent=gene-LDO50_RS23410;Dbxref=GenBank:WP_046426567.1;Name=WP_046426567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479053.1;locus_tag=LDO50_RS23410;product=PAS domain-containing sensor histidine kinase;protein_id=WP_046426567.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 130761 131408 . + . ID=gene-LDO50_RS23415;Name=LDO50_RS23415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23415;old_locus_tag=BVI1335_530124 NZ_CAJZAO010000331.1 Protein Homology CDS 130761 131408 . + 0 ID=cds-WP_059474902.1;Parent=gene-LDO50_RS23415;Dbxref=GenBank:WP_059474902.1;Name=WP_059474902.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329510.1;locus_tag=LDO50_RS23415;product=response regulator;protein_id=WP_059474902.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 131418 131822 . - . ID=gene-LDO50_RS23420;Name=LDO50_RS23420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23420;old_locus_tag=BVI1335_530125 NZ_CAJZAO010000331.1 Protein Homology CDS 131418 131822 . - 0 ID=cds-WP_045578029.1;Parent=gene-LDO50_RS23420;Dbxref=GenBank:WP_045578029.1;Name=WP_045578029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899422.1;locus_tag=LDO50_RS23420;product=lysozyme inhibitor LprI family protein;protein_id=WP_045578029.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 132100 132429 . - . ID=gene-LDO50_RS23425;Name=LDO50_RS23425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23425;old_locus_tag=BVI1335_530126 NZ_CAJZAO010000331.1 Protein Homology CDS 132100 132429 . - 0 ID=cds-WP_011882177.1;Parent=gene-LDO50_RS23425;Dbxref=GenBank:WP_011882177.1;Name=WP_011882177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547733.1;locus_tag=LDO50_RS23425;product=DUF4148 domain-containing protein;protein_id=WP_011882177.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 132986 135517 . - . ID=gene-LDO50_RS23430;Name=LDO50_RS23430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23430;old_locus_tag=BVI1335_530127 NZ_CAJZAO010000331.1 Protein Homology CDS 132986 135517 . - 0 ID=cds-WP_196484620.1;Parent=gene-LDO50_RS23430;Dbxref=GenBank:WP_196484620.1;Name=WP_196484620.1;Ontology_term=GO:0006508,GO:0009252,GO:0008658,GO:0008955,GO:0009002;gbkey=CDS;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882176.1;locus_tag=LDO50_RS23430;product=penicillin-binding protein 1A;protein_id=WP_196484620.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 136034 136771 . - . ID=gene-LDO50_RS23435;Name=LDO50_RS23435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23435;old_locus_tag=BVI1335_530129 NZ_CAJZAO010000331.1 Protein Homology CDS 136034 136771 . - 0 ID=cds-WP_014724920.1;Parent=gene-LDO50_RS23435;Dbxref=GenBank:WP_014724920.1;Name=WP_014724920.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355264.1;locus_tag=LDO50_RS23435;product=FadR/GntR family transcriptional regulator;protein_id=WP_014724920.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 137034 137969 . + . ID=gene-LDO50_RS23440;Name=lhpI;gbkey=Gene;gene=lhpI;gene_biotype=protein_coding;locus_tag=LDO50_RS23440;old_locus_tag=BVI1335_530130 NZ_CAJZAO010000331.1 Protein Homology CDS 137034 137969 . + 0 ID=cds-WP_224020177.1;Parent=gene-LDO50_RS23440;Dbxref=GenBank:WP_224020177.1;Name=WP_224020177.1;Ontology_term=GO:0047125,GO:0050241;gbkey=CDS;gene=lhpI;go_function=delta1-piperideine-2-carboxylate reductase activity|0047125||IEA,pyrroline-2-carboxylate reductase activity|0050241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899432.1;locus_tag=LDO50_RS23440;product=bifunctional Delta(1)-pyrroline-2-carboxylate/Delta(1)-piperideine-2-carboxylate reductase;protein_id=WP_224020177.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 138167 138574 . + . ID=gene-LDO50_RS23445;Name=LDO50_RS23445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23445;old_locus_tag=BVI1335_530128 NZ_CAJZAO010000331.1 Protein Homology CDS 138167 138574 . + 0 ID=cds-WP_014724922.1;Parent=gene-LDO50_RS23445;Dbxref=GenBank:WP_014724922.1;Name=WP_014724922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759295.1;locus_tag=LDO50_RS23445;product=response regulator transcription factor;protein_id=WP_014724922.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 138592 139371 . + . ID=gene-LDO50_RS23450;Name=LDO50_RS23450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23450;old_locus_tag=BVI1335_530131 NZ_CAJZAO010000331.1 Protein Homology CDS 138592 139371 . + 0 ID=cds-WP_011882172.1;Parent=gene-LDO50_RS23450;Dbxref=GenBank:WP_011882172.1;Name=WP_011882172.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765894.1;locus_tag=LDO50_RS23450;product=helix-turn-helix domain-containing protein;protein_id=WP_011882172.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 139427 139780 . - . ID=gene-LDO50_RS23455;Name=LDO50_RS23455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23455;old_locus_tag=BVI1335_530132 NZ_CAJZAO010000331.1 Protein Homology CDS 139427 139780 . - 0 ID=cds-WP_014724923.1;Parent=gene-LDO50_RS23455;Dbxref=GenBank:WP_014724923.1;Name=WP_014724923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012340063.1;locus_tag=LDO50_RS23455;product=hypothetical protein;protein_id=WP_014724923.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 139889 140128 . - . ID=gene-LDO50_RS23460;Name=LDO50_RS23460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23460;old_locus_tag=BVI1335_530133 NZ_CAJZAO010000331.1 Protein Homology CDS 139889 140128 . - 0 ID=cds-WP_011882170.1;Parent=gene-LDO50_RS23460;Dbxref=GenBank:WP_011882170.1;Name=WP_011882170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479066.1;locus_tag=LDO50_RS23460;product=hypothetical protein;protein_id=WP_011882170.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 140145 140435 . - . ID=gene-LDO50_RS23465;Name=LDO50_RS23465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23465;old_locus_tag=BVI1335_530134 NZ_CAJZAO010000331.1 Protein Homology CDS 140145 140435 . - 0 ID=cds-WP_059474325.1;Parent=gene-LDO50_RS23465;Dbxref=GenBank:WP_059474325.1;Name=WP_059474325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479067.1;locus_tag=LDO50_RS23465;product=DUF1488 domain-containing protein;protein_id=WP_059474325.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 140550 140948 . - . ID=gene-LDO50_RS23470;Name=LDO50_RS23470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23470;old_locus_tag=BVI1335_530135 NZ_CAJZAO010000331.1 Protein Homology CDS 140550 140948 . - 0 ID=cds-WP_014724925.1;Parent=gene-LDO50_RS23470;Dbxref=GenBank:WP_014724925.1;Name=WP_014724925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724925.1;locus_tag=LDO50_RS23470;product=DUF488 domain-containing protein;protein_id=WP_014724925.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 141078 142280 . - . ID=gene-LDO50_RS23475;Name=LDO50_RS23475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23475;old_locus_tag=BVI1335_530136 NZ_CAJZAO010000331.1 Protein Homology CDS 141078 142280 . - 0 ID=cds-WP_011882167.1;Parent=gene-LDO50_RS23475;Dbxref=GenBank:WP_011882167.1;Name=WP_011882167.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752666.1;locus_tag=LDO50_RS23475;product=amino acid aminotransferase;protein_id=WP_011882167.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 142327 143712 . - . ID=gene-LDO50_RS23480;Name=LDO50_RS23480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23480;old_locus_tag=BVI1335_530137 NZ_CAJZAO010000331.1 Protein Homology CDS 142327 143712 . - 0 ID=cds-WP_011882166.1;Parent=gene-LDO50_RS23480;Dbxref=GenBank:WP_011882166.1;Name=WP_011882166.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329535.1;locus_tag=LDO50_RS23480;product=amino acid permease;protein_id=WP_011882166.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 144029 144502 . + . ID=gene-LDO50_RS23485;Name=LDO50_RS23485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23485;old_locus_tag=BVI1335_530138 NZ_CAJZAO010000331.1 Protein Homology CDS 144029 144502 . + 0 ID=cds-WP_011882165.1;Parent=gene-LDO50_RS23485;Dbxref=GenBank:WP_011882165.1;Name=WP_011882165.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329536.1;locus_tag=LDO50_RS23485;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011882165.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 144533 145390 . - . ID=gene-LDO50_RS23490;Name=LDO50_RS23490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23490;old_locus_tag=BVI1335_530139 NZ_CAJZAO010000331.1 Protein Homology CDS 144533 145390 . - 0 ID=cds-WP_043292455.1;Parent=gene-LDO50_RS23490;Dbxref=GenBank:WP_043292455.1;Name=WP_043292455.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415252.1;locus_tag=LDO50_RS23490;product=EamA family transporter;protein_id=WP_043292455.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 145795 147468 . + . ID=gene-LDO50_RS23495;Name=LDO50_RS23495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23495;old_locus_tag=BVI1335_530140 NZ_CAJZAO010000331.1 Protein Homology CDS 145795 147468 . + 0 ID=cds-WP_011882163.1;Parent=gene-LDO50_RS23495;Dbxref=GenBank:WP_011882163.1;Name=WP_011882163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882163.1;locus_tag=LDO50_RS23495;product=phospholipase C;protein_id=WP_011882163.1;transl_table=11 NZ_CAJZAO010000331.1 RefSeq gene 147571 148989 . + . ID=gene-LDO50_RS23500;Name=LDO50_RS23500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23500;old_locus_tag=BVI1335_530141 NZ_CAJZAO010000331.1 Protein Homology CDS 147571 148989 . + 0 ID=cds-WP_224020178.1;Parent=gene-LDO50_RS23500;Dbxref=GenBank:WP_224020178.1;Name=WP_224020178.1;Ontology_term=GO:0004130,GO:0016491,GO:0020037;gbkey=CDS;go_function=cytochrome-c peroxidase activity|0004130||IEA,oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752659.1;locus_tag=LDO50_RS23500;product=cytochrome-c peroxidase;protein_id=WP_224020178.1;transl_table=11 ##sequence-region NZ_CAJZAO010000332.1 1 31550 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000332.1 RefSeq region 1 31550 . + . ID=NZ_CAJZAO010000332.1:1..31550;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_54 NZ_CAJZAO010000332.1 RefSeq gene 1 81 . - . ID=gene-LDO50_RS23505;Name=LDO50_RS23505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23505;partial=true;start_range=.,1 NZ_CAJZAO010000332.1 Protein Homology CDS 1 81 . - 0 ID=cds-WP_224020189.1;Parent=gene-LDO50_RS23505;Dbxref=GenBank:WP_224020189.1;Name=WP_224020189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485205.1;locus_tag=LDO50_RS23505;partial=true;product=M81 family metallopeptidase;protein_id=WP_224020189.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 78 1505 . - . ID=gene-LDO50_RS23510;Name=LDO50_RS23510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23510;old_locus_tag=BVI1335_540002 NZ_CAJZAO010000332.1 Protein Homology CDS 78 1505 . - 0 ID=cds-WP_224020181.1;Parent=gene-LDO50_RS23510;Dbxref=GenBank:WP_224020181.1;Name=WP_224020181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007585207.1;locus_tag=LDO50_RS23510;product=aldehyde dehydrogenase family protein;protein_id=WP_224020181.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 1542 2939 . - . ID=gene-LDO50_RS23515;Name=LDO50_RS23515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23515;old_locus_tag=BVI1335_540003 NZ_CAJZAO010000332.1 Protein Homology CDS 1542 2939 . - 0 ID=cds-WP_034194422.1;Parent=gene-LDO50_RS23515;Dbxref=GenBank:WP_034194422.1;Name=WP_034194422.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880641.1;locus_tag=LDO50_RS23515;product=aspartate aminotransferase family protein;protein_id=WP_034194422.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 2994 4400 . - . ID=gene-LDO50_RS23520;Name=LDO50_RS23520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23520;old_locus_tag=BVI1335_540004 NZ_CAJZAO010000332.1 Protein Homology CDS 2994 4400 . - 0 ID=cds-WP_224020182.1;Parent=gene-LDO50_RS23520;Dbxref=GenBank:WP_224020182.1;Name=WP_224020182.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416950.1;locus_tag=LDO50_RS23520;product=APC family permease;protein_id=WP_224020182.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 4648 5727 . + . ID=gene-LDO50_RS23525;Name=LDO50_RS23525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23525;old_locus_tag=BVI1335_540005 NZ_CAJZAO010000332.1 Protein Homology CDS 4648 5727 . + 0 ID=cds-WP_069223865.1;Parent=gene-LDO50_RS23525;Dbxref=GenBank:WP_069223865.1;Name=WP_069223865.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726269.1;locus_tag=LDO50_RS23525;product=AraC family transcriptional regulator;protein_id=WP_069223865.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 5815 7062 . - . ID=gene-LDO50_RS23530;Name=LDO50_RS23530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23530;old_locus_tag=BVI1335_540006 NZ_CAJZAO010000332.1 Protein Homology CDS 5815 7062 . - 0 ID=cds-WP_224020183.1;Parent=gene-LDO50_RS23530;Dbxref=GenBank:WP_224020183.1;Name=WP_224020183.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754640.1;locus_tag=LDO50_RS23530;product=MFS transporter;protein_id=WP_224020183.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 7335 7664 . - . ID=gene-LDO50_RS23535;Name=LDO50_RS23535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23535;old_locus_tag=BVI1335_540008 NZ_CAJZAO010000332.1 Protein Homology CDS 7335 7664 . - 0 ID=cds-WP_011880644.1;Parent=gene-LDO50_RS23535;Dbxref=GenBank:WP_011880644.1;Name=WP_011880644.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760669.1;locus_tag=LDO50_RS23535;product=H-NS histone family protein;protein_id=WP_011880644.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 8038 8982 . - . ID=gene-LDO50_RS23540;Name=LDO50_RS23540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23540;old_locus_tag=BVI1335_540010 NZ_CAJZAO010000332.1 Protein Homology CDS 8038 8982 . - 0 ID=cds-WP_059457399.1;Parent=gene-LDO50_RS23540;Dbxref=GenBank:WP_059457399.1;Name=WP_059457399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750596.1;locus_tag=LDO50_RS23540;product=dTDP-4-dehydrorhamnose reductase family protein;protein_id=WP_059457399.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 9154 9567 . - . ID=gene-LDO50_RS23545;Name=LDO50_RS23545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23545;old_locus_tag=BVI1335_540011 NZ_CAJZAO010000332.1 Protein Homology CDS 9154 9567 . - 0 ID=cds-WP_011880646.1;Parent=gene-LDO50_RS23545;Dbxref=GenBank:WP_011880646.1;Name=WP_011880646.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760672.1;locus_tag=LDO50_RS23545;product=DoxX family protein;protein_id=WP_011880646.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 9892 10935 . - . ID=gene-LDO50_RS23550;Name=LDO50_RS23550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23550;old_locus_tag=BVI1335_540012 NZ_CAJZAO010000332.1 Protein Homology CDS 9892 10935 . - 0 ID=cds-WP_372586119.1;Parent=gene-LDO50_RS23550;Dbxref=GenBank:WP_372586119.1;Name=WP_372586119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880647.1;locus_tag=LDO50_RS23550;product=lysozyme inhibitor LprI family protein;protein_id=WP_372586119.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 11109 12002 . - . ID=gene-LDO50_RS23555;Name=LDO50_RS23555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23555;old_locus_tag=BVI1335_540013 NZ_CAJZAO010000332.1 Protein Homology CDS 11109 12002 . - 0 ID=cds-WP_046429032.1;Parent=gene-LDO50_RS23555;Dbxref=GenBank:WP_046429032.1;Name=WP_046429032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880648.1;locus_tag=LDO50_RS23555;product=LysR family transcriptional regulator;protein_id=WP_046429032.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 12131 12856 . + . ID=gene-LDO50_RS23560;Name=LDO50_RS23560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23560;old_locus_tag=BVI1335_540014 NZ_CAJZAO010000332.1 Protein Homology CDS 12131 12856 . + 0 ID=cds-WP_011880649.1;Parent=gene-LDO50_RS23560;Dbxref=GenBank:WP_011880649.1;Name=WP_011880649.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525454.1;locus_tag=LDO50_RS23560;product=pirin family protein;protein_id=WP_011880649.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 12919 13521 . + . ID=gene-LDO50_RS23565;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=LDO50_RS23565;old_locus_tag=BVI1335_540015 NZ_CAJZAO010000332.1 Protein Homology CDS 12919 13521 . + 0 ID=cds-WP_011880650.1;Parent=gene-LDO50_RS23565;Dbxref=GenBank:WP_011880650.1;Name=WP_011880650.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350320.1;locus_tag=LDO50_RS23565;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_011880650.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 14180 14509 . - . ID=gene-LDO50_RS23570;Name=LDO50_RS23570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23570;old_locus_tag=BVI1335_540017 NZ_CAJZAO010000332.1 Protein Homology CDS 14180 14509 . - 0 ID=cds-WP_059581281.1;Parent=gene-LDO50_RS23570;Dbxref=GenBank:WP_059581281.1;Name=WP_059581281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490956.1;locus_tag=LDO50_RS23570;product=hypothetical protein;protein_id=WP_059581281.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 14506 14799 . - . ID=gene-LDO50_RS23575;Name=LDO50_RS23575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23575;old_locus_tag=BVI1335_540018 NZ_CAJZAO010000332.1 GeneMarkS-2+ CDS 14506 14799 . - 0 ID=cds-WP_155627922.1;Parent=gene-LDO50_RS23575;Dbxref=GenBank:WP_155627922.1;Name=WP_155627922.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS23575;product=hypothetical protein;protein_id=WP_155627922.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 14790 15524 . - . ID=gene-LDO50_RS23580;Name=LDO50_RS23580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23580;old_locus_tag=BVI1335_540019 NZ_CAJZAO010000332.1 Protein Homology CDS 14790 15524 . - 0 ID=cds-WP_011880654.1;Parent=gene-LDO50_RS23580;Dbxref=GenBank:WP_011880654.1;Name=WP_011880654.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372191.1;locus_tag=LDO50_RS23580;product=LrgB family protein;protein_id=WP_011880654.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 15521 15892 . - . ID=gene-LDO50_RS23585;Name=LDO50_RS23585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23585;old_locus_tag=BVI1335_540020 NZ_CAJZAO010000332.1 Protein Homology CDS 15521 15892 . - 0 ID=cds-WP_011880655.1;Parent=gene-LDO50_RS23585;Dbxref=GenBank:WP_011880655.1;Name=WP_011880655.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337109.1;locus_tag=LDO50_RS23585;product=CidA/LrgA family protein;protein_id=WP_011880655.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 16170 17204 . - . ID=gene-LDO50_RS23590;Name=LDO50_RS23590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23590;old_locus_tag=BVI1335_540021 NZ_CAJZAO010000332.1 Protein Homology CDS 16170 17204 . - 0 ID=cds-WP_011880656.1;Parent=gene-LDO50_RS23590;Dbxref=GenBank:WP_011880656.1;Name=WP_011880656.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416006.1;locus_tag=LDO50_RS23590;product=alpha/beta hydrolase;protein_id=WP_011880656.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 17277 17702 . - . ID=gene-LDO50_RS23595;Name=LDO50_RS23595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23595;old_locus_tag=BVI1335_540022 NZ_CAJZAO010000332.1 Protein Homology CDS 17277 17702 . - 0 ID=cds-WP_011880657.1;Parent=gene-LDO50_RS23595;Dbxref=GenBank:WP_011880657.1;Name=WP_011880657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767064.1;locus_tag=LDO50_RS23595;product=organic hydroperoxide resistance protein;protein_id=WP_011880657.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 17917 18483 . - . ID=gene-LDO50_RS23600;Name=LDO50_RS23600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23600;old_locus_tag=BVI1335_540023 NZ_CAJZAO010000332.1 Protein Homology CDS 17917 18483 . - 0 ID=cds-WP_011880658.1;Parent=gene-LDO50_RS23600;Dbxref=GenBank:WP_011880658.1;Name=WP_011880658.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490955.1;locus_tag=LDO50_RS23600;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011880658.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 18697 20550 . + . ID=gene-LDO50_RS23605;Name=LDO50_RS23605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23605;old_locus_tag=BVI1335_540024 NZ_CAJZAO010000332.1 Protein Homology CDS 18697 20550 . + 0 ID=cds-WP_059550355.1;Parent=gene-LDO50_RS23605;Dbxref=GenBank:WP_059550355.1;Name=WP_059550355.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399227.1;locus_tag=LDO50_RS23605;product=ABC transporter ATP-binding protein;protein_id=WP_059550355.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 20609 21067 . - . ID=gene-LDO50_RS23610;Name=LDO50_RS23610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23610;old_locus_tag=BVI1335_540025 NZ_CAJZAO010000332.1 Protein Homology CDS 20609 21067 . - 0 ID=cds-WP_224020185.1;Parent=gene-LDO50_RS23610;Dbxref=GenBank:WP_224020185.1;Name=WP_224020185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767060.1;locus_tag=LDO50_RS23610;product=sodium:proline symporter;protein_id=WP_224020185.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 21144 21803 . - . ID=gene-LDO50_RS23615;Name=LDO50_RS23615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23615;old_locus_tag=BVI1335_540026 NZ_CAJZAO010000332.1 Protein Homology CDS 21144 21803 . - 0 ID=cds-WP_011880661.1;Parent=gene-LDO50_RS23615;Dbxref=GenBank:WP_011880661.1;Name=WP_011880661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749736.1;locus_tag=LDO50_RS23615;product=hypothetical protein;protein_id=WP_011880661.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 21954 22913 . - . ID=gene-LDO50_RS23620;Name=LDO50_RS23620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23620;old_locus_tag=BVI1335_540027 NZ_CAJZAO010000332.1 Protein Homology CDS 21954 22913 . - 0 ID=cds-WP_059453382.1;Parent=gene-LDO50_RS23620;Dbxref=GenBank:WP_059453382.1;Name=WP_059453382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481033.1;locus_tag=LDO50_RS23620;product=LysR substrate-binding domain-containing protein;protein_id=WP_059453382.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 22971 23879 . + . ID=gene-LDO50_RS23625;Name=LDO50_RS23625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23625;old_locus_tag=BVI1335_540028 NZ_CAJZAO010000332.1 Protein Homology CDS 22971 23879 . + 0 ID=cds-WP_059550353.1;Parent=gene-LDO50_RS23625;Dbxref=GenBank:WP_059550353.1;Name=WP_059550353.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549321.1;locus_tag=LDO50_RS23625;product=DMT family transporter;protein_id=WP_059550353.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 24462 25616 . + . ID=gene-LDO50_RS23630;Name=LDO50_RS23630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23630;old_locus_tag=BVI1335_540030 NZ_CAJZAO010000332.1 Protein Homology CDS 24462 25616 . + 0 ID=cds-WP_224020186.1;Parent=gene-LDO50_RS23630;Dbxref=GenBank:WP_224020186.1;Name=WP_224020186.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726283.1;locus_tag=LDO50_RS23630;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_224020186.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 25703 26005 . + . ID=gene-LDO50_RS23635;Name=LDO50_RS23635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23635;old_locus_tag=BVI1335_540031 NZ_CAJZAO010000332.1 Protein Homology CDS 25703 26005 . + 0 ID=cds-WP_059453384.1;Parent=gene-LDO50_RS23635;Dbxref=GenBank:WP_059453384.1;Name=WP_059453384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726284.1;locus_tag=LDO50_RS23635;product=hypothetical protein;protein_id=WP_059453384.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 26101 29151 . - . ID=gene-LDO50_RS23640;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=LDO50_RS23640;old_locus_tag=BVI1335_540032 NZ_CAJZAO010000332.1 Protein Homology CDS 26101 29151 . - 0 ID=cds-WP_224020187.1;Parent=gene-LDO50_RS23640;Dbxref=GenBank:WP_224020187.1;Name=WP_224020187.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase (NAD+) activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726285.1;locus_tag=LDO50_RS23640;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_224020187.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 29305 30195 . + . ID=gene-LDO50_RS23645;Name=LDO50_RS23645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23645;old_locus_tag=BVI1335_540033 NZ_CAJZAO010000332.1 Protein Homology CDS 29305 30195 . + 0 ID=cds-WP_014726286.1;Parent=gene-LDO50_RS23645;Dbxref=GenBank:WP_014726286.1;Name=WP_014726286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372166.1;locus_tag=LDO50_RS23645;product=LysR substrate-binding domain-containing protein;protein_id=WP_014726286.1;transl_table=11 NZ_CAJZAO010000332.1 RefSeq gene 30518 31550 . + . ID=gene-LDO50_RS23650;Name=LDO50_RS23650;end_range=31550,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23650;partial=true NZ_CAJZAO010000332.1 Protein Homology CDS 30518 31550 . + 0 ID=cds-WP_224020188.1;Parent=gene-LDO50_RS23650;Dbxref=GenBank:WP_224020188.1;Name=WP_224020188.1;end_range=31550,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493661.1;locus_tag=LDO50_RS23650;partial=true;product=dihydroxyacetone kinase family protein;protein_id=WP_224020188.1;transl_table=11 ##sequence-region NZ_CAJZAO010000333.1 1 9759 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000333.1 RefSeq region 1 9759 . + . ID=NZ_CAJZAO010000333.1:1..9759;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_55 NZ_CAJZAO010000333.1 RefSeq gene 1 247 . + . ID=gene-LDO50_RS23655;Name=LDO50_RS23655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23655;old_locus_tag=BVI1335_550001;partial=true;start_range=.,1 NZ_CAJZAO010000333.1 Protein Homology CDS 1 247 . + 1 ID=cds-WP_224020190.1;Parent=gene-LDO50_RS23655;Dbxref=GenBank:WP_224020190.1;Name=WP_224020190.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006051897.1;locus_tag=LDO50_RS23655;partial=true;product=transcriptional repressor;protein_id=WP_224020190.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000333.1 RefSeq gene 342 872 . - . ID=gene-LDO50_RS23660;Name=LDO50_RS23660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23660;old_locus_tag=BVI1335_550002 NZ_CAJZAO010000333.1 Protein Homology CDS 342 872 . - 0 ID=cds-WP_011883255.1;Parent=gene-LDO50_RS23660;Dbxref=GenBank:WP_011883255.1;Name=WP_011883255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091325.1;locus_tag=LDO50_RS23660;product=ureidoglycolate lyase;protein_id=WP_011883255.1;transl_table=11 NZ_CAJZAO010000333.1 RefSeq gene 887 1894 . - . ID=gene-LDO50_RS23665;Name=alc;gbkey=Gene;gene=alc;gene_biotype=protein_coding;locus_tag=LDO50_RS23665;old_locus_tag=BVI1335_550003 NZ_CAJZAO010000333.1 Protein Homology CDS 887 1894 . - 0 ID=cds-WP_011883254.1;Parent=gene-LDO50_RS23665;Dbxref=GenBank:WP_011883254.1;Name=WP_011883254.1;Ontology_term=GO:0000256,GO:0004037;gbkey=CDS;gene=alc;go_function=allantoicase activity|0004037||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476931.1;locus_tag=LDO50_RS23665;product=allantoicase;protein_id=WP_011883254.1;transl_table=11 NZ_CAJZAO010000333.1 RefSeq gene 2003 3325 . - . ID=gene-LDO50_RS23670;Name=LDO50_RS23670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23670;old_locus_tag=BVI1335_550004 NZ_CAJZAO010000333.1 Protein Homology CDS 2003 3325 . - 0 ID=cds-WP_224020191.1;Parent=gene-LDO50_RS23670;Dbxref=GenBank:WP_224020191.1;Name=WP_224020191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350923.1;locus_tag=LDO50_RS23670;product=C4-dicarboxylate transporter DctA;protein_id=WP_224020191.1;transl_table=11 NZ_CAJZAO010000333.1 RefSeq gene 3538 4260 . + . ID=gene-LDO50_RS23675;Name=LDO50_RS23675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23675;old_locus_tag=BVI1335_550005 NZ_CAJZAO010000333.1 Protein Homology CDS 3538 4260 . + 0 ID=cds-WP_014722435.1;Parent=gene-LDO50_RS23675;Dbxref=GenBank:WP_014722435.1;Name=WP_014722435.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722435.1;locus_tag=LDO50_RS23675;product=FadR/GntR family transcriptional regulator;protein_id=WP_014722435.1;transl_table=11 NZ_CAJZAO010000333.1 RefSeq gene 4430 5440 . - . ID=gene-LDO50_RS23680;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=LDO50_RS23680;old_locus_tag=BVI1335_550006 NZ_CAJZAO010000333.1 Protein Homology CDS 4430 5440 . - 0 ID=cds-WP_011883251.1;Parent=gene-LDO50_RS23680;Dbxref=GenBank:WP_011883251.1;Name=WP_011883251.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883251.1;locus_tag=LDO50_RS23680;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_011883251.1;transl_table=11 NZ_CAJZAO010000333.1 RefSeq gene 5528 7600 . - . ID=gene-LDO50_RS23685;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=LDO50_RS23685;old_locus_tag=BVI1335_550007 NZ_CAJZAO010000333.1 Protein Homology CDS 5528 7600 . - 0 ID=cds-WP_014722434.1;Parent=gene-LDO50_RS23685;Dbxref=GenBank:WP_014722434.1;Name=WP_014722434.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363073.1;locus_tag=LDO50_RS23685;product=transketolase;protein_id=WP_014722434.1;transl_table=11 NZ_CAJZAO010000333.1 RefSeq gene 7816 8673 . + . ID=gene-LDO50_RS23690;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=LDO50_RS23690;old_locus_tag=BVI1335_550008 NZ_CAJZAO010000333.1 Protein Homology CDS 7816 8673 . + 0 ID=cds-WP_011883249.1;Parent=gene-LDO50_RS23690;Dbxref=GenBank:WP_011883249.1;Name=WP_011883249.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496731.1;locus_tag=LDO50_RS23690;product=polyamine aminopropyltransferase;protein_id=WP_011883249.1;transl_table=11 NZ_CAJZAO010000333.1 RefSeq gene 8807 9223 . + . ID=gene-LDO50_RS23695;Name=LDO50_RS23695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23695;old_locus_tag=BVI1335_550009 NZ_CAJZAO010000333.1 Protein Homology CDS 8807 9223 . + 0 ID=cds-WP_011883248.1;Parent=gene-LDO50_RS23695;Dbxref=GenBank:WP_011883248.1;Name=WP_011883248.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722433.1;locus_tag=LDO50_RS23695;product=VOC family protein;protein_id=WP_011883248.1;transl_table=11 NZ_CAJZAO010000333.1 RefSeq gene 9241 9759 . + . ID=gene-LDO50_RS23700;Name=LDO50_RS23700;end_range=9759,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23700;partial=true NZ_CAJZAO010000333.1 Protein Homology CDS 9241 9759 . + 0 ID=cds-WP_224020192.1;Parent=gene-LDO50_RS23700;Dbxref=GenBank:WP_224020192.1;Name=WP_224020192.1;Ontology_term=GO:0006364,GO:0008168;end_range=9759,.;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194189.1;locus_tag=LDO50_RS23700;partial=true;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_224020192.1;transl_table=11 ##sequence-region NZ_CAJZAO010000334.1 1 5668 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000334.1 RefSeq region 1 5668 . + . ID=NZ_CAJZAO010000334.1:1..5668;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_56 NZ_CAJZAO010000334.1 RefSeq pseudogene 1 1896 . + . ID=gene-LDO50_RS23705;Name=LDO50_RS23705;end_range=1896,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS23705;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000334.1 Protein Homology CDS 1 1896 . + 0 ID=cds-LDO50_RS23705;Parent=gene-LDO50_RS23705;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0033103,GO:0033104;end_range=1896,.;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881740.1;locus_tag=LDO50_RS23705;partial=true;product=type VI secretion system Vgr family protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000334.1 RefSeq gene 3347 4672 . + . ID=gene-LDO50_RS23710;Name=LDO50_RS23710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23710;old_locus_tag=BVI1335_560002 NZ_CAJZAO010000334.1 GeneMarkS-2+ CDS 3347 4672 . + 0 ID=cds-WP_155626194.1;Parent=gene-LDO50_RS23710;Dbxref=GenBank:WP_155626194.1;Name=WP_155626194.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS23710;product=hypothetical protein;protein_id=WP_155626194.1;transl_table=11 NZ_CAJZAO010000334.1 RefSeq gene 5242 5668 . + . ID=gene-LDO50_RS23715;Name=LDO50_RS23715;end_range=5668,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23715;partial=true NZ_CAJZAO010000334.1 Protein Homology CDS 5242 5668 . + 0 ID=cds-WP_224020193.1;Parent=gene-LDO50_RS23715;Dbxref=GenBank:WP_224020193.1;Name=WP_224020193.1;end_range=5668,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881740.1;locus_tag=LDO50_RS23715;partial=true;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_224020193.1;transl_table=11 ##sequence-region NZ_CAJZAO010000335.1 1 34661 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000335.1 RefSeq region 1 34661 . + . ID=NZ_CAJZAO010000335.1:1..34661;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_57 NZ_CAJZAO010000335.1 RefSeq gene 651 911 . + . ID=gene-LDO50_RS23720;Name=LDO50_RS23720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23720;old_locus_tag=BVI1335_570002 NZ_CAJZAO010000335.1 Protein Homology CDS 651 911 . + 0 ID=cds-WP_011886027.1;Parent=gene-LDO50_RS23720;Dbxref=GenBank:WP_011886027.1;Name=WP_011886027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014252231.1;locus_tag=LDO50_RS23720;product=phosphopantetheine-binding protein;protein_id=WP_011886027.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 1020 1736 . + . ID=gene-LDO50_RS23725;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=LDO50_RS23725;old_locus_tag=BVI1335_570003 NZ_CAJZAO010000335.1 Protein Homology CDS 1020 1736 . + 0 ID=cds-WP_060091988.1;Parent=gene-LDO50_RS23725;Dbxref=GenBank:WP_060091988.1;Name=WP_060091988.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fabG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003269686.1;locus_tag=LDO50_RS23725;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_060091988.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 1895 2131 . + . ID=gene-LDO50_RS23730;Name=LDO50_RS23730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23730 NZ_CAJZAO010000335.1 GeneMarkS-2+ CDS 1895 2131 . + 0 ID=cds-WP_059475006.1;Parent=gene-LDO50_RS23730;Dbxref=GenBank:WP_059475006.1;Name=WP_059475006.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS23730;product=hypothetical protein;protein_id=WP_059475006.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 2248 3063 . + . ID=gene-LDO50_RS23735;Name=LDO50_RS23735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23735;old_locus_tag=BVI1335_570005 NZ_CAJZAO010000335.1 Protein Homology CDS 2248 3063 . + 0 ID=cds-WP_011886024.1;Parent=gene-LDO50_RS23735;Dbxref=GenBank:WP_011886024.1;Name=WP_011886024.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886024.1;locus_tag=LDO50_RS23735;product=glycosyltransferase family 2 protein;protein_id=WP_011886024.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 3201 3962 . + . ID=gene-LDO50_RS23740;Name=LDO50_RS23740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23740;old_locus_tag=BVI1335_570006 NZ_CAJZAO010000335.1 Protein Homology CDS 3201 3962 . + 0 ID=cds-WP_011886023.1;Parent=gene-LDO50_RS23740;Dbxref=GenBank:WP_011886023.1;Name=WP_011886023.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477817.1;locus_tag=LDO50_RS23740;product=M48 family metalloprotease;protein_id=WP_011886023.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 4074 5774 . - . ID=gene-LDO50_RS23745;Name=LDO50_RS23745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23745;old_locus_tag=BVI1335_570007 NZ_CAJZAO010000335.1 Protein Homology CDS 4074 5774 . - 0 ID=cds-WP_034194788.1;Parent=gene-LDO50_RS23745;Dbxref=GenBank:WP_034194788.1;Name=WP_034194788.1;Ontology_term=GO:0015718,GO:0008028,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=monocarboxylic acid transmembrane transporter activity|0008028||IEA;go_process=monocarboxylic acid transport|0015718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761804.1;locus_tag=LDO50_RS23745;product=lactate permease LctP family transporter;protein_id=WP_034194788.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 5823 7268 . - . ID=gene-LDO50_RS23750;Name=LDO50_RS23750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23750;old_locus_tag=BVI1335_570008 NZ_CAJZAO010000335.1 Protein Homology CDS 5823 7268 . - 0 ID=cds-WP_034194789.1;Parent=gene-LDO50_RS23750;Dbxref=GenBank:WP_034194789.1;Name=WP_034194789.1;Ontology_term=GO:0006089,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886021.1;locus_tag=LDO50_RS23750;product=LutB/LldF family L-lactate oxidation iron-sulfur protein;protein_id=WP_034194789.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 7265 7990 . - . ID=gene-LDO50_RS23755;Name=LDO50_RS23755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23755;old_locus_tag=BVI1335_570009 NZ_CAJZAO010000335.1 Protein Homology CDS 7265 7990 . - 0 ID=cds-WP_059475004.1;Parent=gene-LDO50_RS23755;Dbxref=GenBank:WP_059475004.1;Name=WP_059475004.1;Ontology_term=GO:0006089;gbkey=CDS;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364706.1;locus_tag=LDO50_RS23755;product=LutC/YkgG family protein;protein_id=WP_059475004.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 7987 8787 . - . ID=gene-LDO50_RS23760;Name=LDO50_RS23760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23760;old_locus_tag=BVI1335_570010 NZ_CAJZAO010000335.1 Protein Homology CDS 7987 8787 . - 0 ID=cds-WP_041493889.1;Parent=gene-LDO50_RS23760;Dbxref=GenBank:WP_041493889.1;Name=WP_041493889.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762757.1;locus_tag=LDO50_RS23760;product=(Fe-S)-binding protein;protein_id=WP_041493889.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 8921 9637 . + . ID=gene-LDO50_RS23765;Name=LDO50_RS23765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23765;old_locus_tag=BVI1335_570011 NZ_CAJZAO010000335.1 Protein Homology CDS 8921 9637 . + 0 ID=cds-WP_011886018.1;Parent=gene-LDO50_RS23765;Dbxref=GenBank:WP_011886018.1;Name=WP_011886018.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886018.1;locus_tag=LDO50_RS23765;product=FadR/GntR family transcriptional regulator;protein_id=WP_011886018.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 9952 11574 . + . ID=gene-LDO50_RS23770;Name=LDO50_RS23770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23770;old_locus_tag=BVI1335_570013 NZ_CAJZAO010000335.1 Protein Homology CDS 9952 11574 . + 0 ID=cds-WP_034194792.1;Parent=gene-LDO50_RS23770;Dbxref=GenBank:WP_034194792.1;Name=WP_034194792.1;Ontology_term=GO:0032049,GO:0090483;gbkey=CDS;go_function=phosphatidylglycerol-phosphatidylethanolamine phosphatidyltransferase activity|0090483||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497399.1;locus_tag=LDO50_RS23770;product=phospholipase D family protein;protein_id=WP_034194792.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 11726 12499 . + . ID=gene-LDO50_RS23775;Name=LDO50_RS23775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23775;old_locus_tag=BVI1335_570014 NZ_CAJZAO010000335.1 Protein Homology CDS 11726 12499 . + 0 ID=cds-WP_059568656.1;Parent=gene-LDO50_RS23775;Dbxref=GenBank:WP_059568656.1;Name=WP_059568656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353182.1;locus_tag=LDO50_RS23775;product=class II aldolase/adducin family protein;protein_id=WP_059568656.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 12832 13266 . + . ID=gene-LDO50_RS23780;Name=LDO50_RS23780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23780;old_locus_tag=BVI1335_570015 NZ_CAJZAO010000335.1 Protein Homology CDS 12832 13266 . + 0 ID=cds-WP_059606734.1;Parent=gene-LDO50_RS23780;Dbxref=GenBank:WP_059606734.1;Name=WP_059606734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657914.1;locus_tag=LDO50_RS23780;product=CHRD domain-containing protein;protein_id=WP_059606734.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 13482 14324 . - . ID=gene-LDO50_RS23785;Name=LDO50_RS23785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23785;old_locus_tag=BVI1335_570017 NZ_CAJZAO010000335.1 Protein Homology CDS 13482 14324 . - 0 ID=cds-WP_014723635.1;Parent=gene-LDO50_RS23785;Dbxref=GenBank:WP_014723635.1;Name=WP_014723635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004555278.1;locus_tag=LDO50_RS23785;product=EcsC family protein;protein_id=WP_014723635.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 14429 16024 . + . ID=gene-LDO50_RS23790;Name=LDO50_RS23790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23790;old_locus_tag=BVI1335_570018 NZ_CAJZAO010000335.1 Protein Homology CDS 14429 16024 . + 0 ID=cds-WP_011886013.1;Parent=gene-LDO50_RS23790;Dbxref=GenBank:WP_011886013.1;Name=WP_011886013.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406581.1;locus_tag=LDO50_RS23790;product=MFS transporter;protein_id=WP_011886013.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 16060 16506 . + . ID=gene-LDO50_RS23795;Name=LDO50_RS23795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23795;old_locus_tag=BVI1335_570019 NZ_CAJZAO010000335.1 Protein Homology CDS 16060 16506 . + 0 ID=cds-WP_014723633.1;Parent=gene-LDO50_RS23795;Dbxref=GenBank:WP_014723633.1;Name=WP_014723633.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759689.1;locus_tag=LDO50_RS23795;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_014723633.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 16613 17194 . - . ID=gene-LDO50_RS23800;Name=LDO50_RS23800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23800;old_locus_tag=BVI1335_570020 NZ_CAJZAO010000335.1 Protein Homology CDS 16613 17194 . - 0 ID=cds-WP_011886011.1;Parent=gene-LDO50_RS23800;Dbxref=GenBank:WP_011886011.1;Name=WP_011886011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024552.1;locus_tag=LDO50_RS23800;product=DJ-1/PfpI family protein;protein_id=WP_011886011.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 17359 18639 . - . ID=gene-LDO50_RS23805;Name=LDO50_RS23805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23805;old_locus_tag=BVI1335_570021 NZ_CAJZAO010000335.1 Protein Homology CDS 17359 18639 . - 0 ID=cds-WP_045579428.1;Parent=gene-LDO50_RS23805;Dbxref=GenBank:WP_045579428.1;Name=WP_045579428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009902905.1;locus_tag=LDO50_RS23805;product=amino acid deaminase;protein_id=WP_045579428.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 18759 19697 . + . ID=gene-LDO50_RS23810;Name=LDO50_RS23810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23810;old_locus_tag=BVI1335_570022 NZ_CAJZAO010000335.1 Protein Homology CDS 18759 19697 . + 0 ID=cds-WP_014723631.1;Parent=gene-LDO50_RS23810;Dbxref=GenBank:WP_014723631.1;Name=WP_014723631.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723631.1;locus_tag=LDO50_RS23810;product=MurR/RpiR family transcriptional regulator;protein_id=WP_014723631.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 19700 21181 . + . ID=gene-LDO50_RS23815;Name=LDO50_RS23815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23815;old_locus_tag=BVI1335_570023 NZ_CAJZAO010000335.1 Protein Homology CDS 19700 21181 . + 0 ID=cds-WP_014723630.1;Parent=gene-LDO50_RS23815;Dbxref=GenBank:WP_014723630.1;Name=WP_014723630.1;Ontology_term=GO:0047420;gbkey=CDS;go_function=N-acyl-D-amino-acid deacylase activity|0047420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353172.1;locus_tag=LDO50_RS23815;product=N-acyl-D-amino-acid deacylase family protein;protein_id=WP_014723630.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 21277 21663 . + . ID=gene-LDO50_RS23820;Name=LDO50_RS23820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23820;old_locus_tag=BVI1335_570024 NZ_CAJZAO010000335.1 Protein Homology CDS 21277 21663 . + 0 ID=cds-WP_045578784.1;Parent=gene-LDO50_RS23820;Dbxref=GenBank:WP_045578784.1;Name=WP_045578784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751946.1;locus_tag=LDO50_RS23820;product=RidA family protein;protein_id=WP_045578784.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 21758 22582 . - . ID=gene-LDO50_RS23825;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=LDO50_RS23825;old_locus_tag=BVI1335_570025 NZ_CAJZAO010000335.1 Protein Homology CDS 21758 22582 . - 0 ID=cds-WP_011886006.1;Parent=gene-LDO50_RS23825;Dbxref=GenBank:WP_011886006.1;Name=WP_011886006.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886006.1;locus_tag=LDO50_RS23825;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_011886006.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 22595 24118 . - . ID=gene-LDO50_RS23830;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=LDO50_RS23830;old_locus_tag=BVI1335_570026 NZ_CAJZAO010000335.1 Protein Homology CDS 22595 24118 . - 0 ID=cds-WP_014723627.1;Parent=gene-LDO50_RS23830;Dbxref=GenBank:WP_014723627.1;Name=WP_014723627.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334189.1;locus_tag=LDO50_RS23830;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_014723627.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 24729 28748 . + . ID=gene-LDO50_RS23835;Name=LDO50_RS23835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23835;old_locus_tag=BVI1335_570028 NZ_CAJZAO010000335.1 Protein Homology CDS 24729 28748 . + 0 ID=cds-WP_224020194.1;Parent=gene-LDO50_RS23835;Dbxref=GenBank:WP_224020194.1;Name=WP_224020194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543744.1;locus_tag=LDO50_RS23835;product=DUF3683 domain-containing protein;protein_id=WP_224020194.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 28814 29257 . + . ID=gene-LDO50_RS23840;Name=LDO50_RS23840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23840;old_locus_tag=BVI1335_570029 NZ_CAJZAO010000335.1 Protein Homology CDS 28814 29257 . + 0 ID=cds-WP_011886003.1;Parent=gene-LDO50_RS23840;Dbxref=GenBank:WP_011886003.1;Name=WP_011886003.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004550872.1;locus_tag=LDO50_RS23840;product=HIT family protein;protein_id=WP_011886003.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 29254 29667 . + . ID=gene-LDO50_RS23845;Name=LDO50_RS23845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23845;old_locus_tag=BVI1335_570030 NZ_CAJZAO010000335.1 Protein Homology CDS 29254 29667 . + 0 ID=cds-WP_011886002.1;Parent=gene-LDO50_RS23845;Dbxref=GenBank:WP_011886002.1;Name=WP_011886002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487879.1;locus_tag=LDO50_RS23845;product=gamma-butyrobetaine hydroxylase-like domain-containing protein;protein_id=WP_011886002.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 29720 30451 . + . ID=gene-LDO50_RS23850;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=LDO50_RS23850;old_locus_tag=BVI1335_570031 NZ_CAJZAO010000335.1 Protein Homology CDS 29720 30451 . + 0 ID=cds-WP_011886001.1;Parent=gene-LDO50_RS23850;Dbxref=GenBank:WP_011886001.1;Name=WP_011886001.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546189.1;locus_tag=LDO50_RS23850;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_011886001.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq pseudogene 30493 30772 . + . ID=gene-LDO50_RS31155;Name=LDO50_RS31155;end_range=30772,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31155;old_locus_tag=BVI1335_570032;partial=true;pseudo=true NZ_CAJZAO010000335.1 Protein Homology CDS 30493 30772 . + 0 ID=cds-LDO50_RS31155;Parent=gene-LDO50_RS31155;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=30772,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546188.1;locus_tag=LDO50_RS31155;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 30783 31333 . + . ID=gene-LDO50_RS23855;Name=LDO50_RS23855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23855;old_locus_tag=BVI1335_570033;partial=true;start_range=.,30783 NZ_CAJZAO010000335.1 Protein Homology CDS 30783 31333 . + 2 ID=cds-WP_372586120.1;Parent=gene-LDO50_RS23855;Dbxref=GenBank:WP_372586120.1;Name=WP_372586120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896075.1;locus_tag=LDO50_RS23855;partial=true;product=Tim44 domain-containing protein;protein_id=WP_372586120.1;start_range=.,30783;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 31495 32121 . + . ID=gene-LDO50_RS23860;Name=LDO50_RS23860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23860;old_locus_tag=BVI1335_570034 NZ_CAJZAO010000335.1 Protein Homology CDS 31495 32121 . + 0 ID=cds-WP_011885999.1;Parent=gene-LDO50_RS23860;Dbxref=GenBank:WP_011885999.1;Name=WP_011885999.1;Ontology_term=GO:0006744,GO:0008289,GO:0110142;gbkey=CDS;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_function=lipid binding|0008289||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761590.1;locus_tag=LDO50_RS23860;product=ubiquinone biosynthesis accessory factor UbiJ;protein_id=WP_011885999.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 32134 33711 . + . ID=gene-LDO50_RS23865;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=LDO50_RS23865;old_locus_tag=BVI1335_570035 NZ_CAJZAO010000335.1 Protein Homology CDS 32134 33711 . + 0 ID=cds-WP_011885998.1;Parent=gene-LDO50_RS23865;Dbxref=GenBank:WP_011885998.1;Name=WP_011885998.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477840.1;locus_tag=LDO50_RS23865;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_011885998.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 33729 34355 . + . ID=gene-LDO50_RS23870;Name=LDO50_RS23870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23870;old_locus_tag=BVI1335_570036 NZ_CAJZAO010000335.1 Protein Homology CDS 33729 34355 . + 0 ID=cds-WP_014723623.1;Parent=gene-LDO50_RS23870;Dbxref=GenBank:WP_014723623.1;Name=WP_014723623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751503.1;locus_tag=LDO50_RS23870;product=SAM-dependent methyltransferase;protein_id=WP_014723623.1;transl_table=11 NZ_CAJZAO010000335.1 RefSeq gene 34451 34661 . + . ID=gene-LDO50_RS23875;Name=LDO50_RS23875;end_range=34661,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23875;partial=true NZ_CAJZAO010000335.1 Protein Homology CDS 34451 34661 . + 0 ID=cds-WP_290370768.1;Parent=gene-LDO50_RS23875;Dbxref=GenBank:WP_290370768.1;Name=WP_290370768.1;Ontology_term=GO:0008270;end_range=34661,.;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004555565.1;locus_tag=LDO50_RS23875;partial=true;product=FmdB family zinc ribbon protein;protein_id=WP_290370768.1;transl_table=11 ##sequence-region NZ_CAJZAO010000336.1 1 40476 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000336.1 RefSeq region 1 40476 . + . ID=NZ_CAJZAO010000336.1:1..40476;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_58 NZ_CAJZAO010000336.1 RefSeq gene 1 654 . - . ID=gene-LDO50_RS23880;Name=LDO50_RS23880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23880;partial=true;start_range=.,1 NZ_CAJZAO010000336.1 Protein Homology CDS 1 654 . - 0 ID=cds-WP_224020195.1;Parent=gene-LDO50_RS23880;Dbxref=GenBank:WP_224020195.1;Name=WP_224020195.1;Ontology_term=GO:0004096,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217731.1;locus_tag=LDO50_RS23880;partial=true;product=manganese catalase family protein;protein_id=WP_224020195.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 1173 1457 . - . ID=gene-LDO50_RS23885;Name=LDO50_RS23885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23885;old_locus_tag=BVI1335_580002 NZ_CAJZAO010000336.1 Protein Homology CDS 1173 1457 . - 0 ID=cds-WP_014725235.1;Parent=gene-LDO50_RS23885;Dbxref=GenBank:WP_014725235.1;Name=WP_014725235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337213.1;locus_tag=LDO50_RS23885;product=hypothetical protein;protein_id=WP_014725235.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq pseudogene 1831 2473 . - . ID=gene-LDO50_RS31005;Name=LDO50_RS31005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31005;pseudo=true NZ_CAJZAO010000336.1 Protein Homology CDS 1831 2473 . - 0 ID=cds-LDO50_RS31005;Parent=gene-LDO50_RS31005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485969.1;locus_tag=LDO50_RS31005;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 2668 4002 . + . ID=gene-LDO50_RS23895;Name=LDO50_RS23895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23895;old_locus_tag=BVI1335_580005 NZ_CAJZAO010000336.1 Protein Homology CDS 2668 4002 . + 0 ID=cds-WP_014725234.1;Parent=gene-LDO50_RS23895;Dbxref=GenBank:WP_014725234.1;Name=WP_014725234.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009900352.1;locus_tag=LDO50_RS23895;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_014725234.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 4074 5168 . + . ID=gene-LDO50_RS23900;Name=LDO50_RS23900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23900;old_locus_tag=BVI1335_580006 NZ_CAJZAO010000336.1 Protein Homology CDS 4074 5168 . + 0 ID=cds-WP_059461407.1;Parent=gene-LDO50_RS23900;Dbxref=GenBank:WP_059461407.1;Name=WP_059461407.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725233.1;locus_tag=LDO50_RS23900;product=potassium channel family protein;protein_id=WP_059461407.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq pseudogene 5270 5544 . + . ID=gene-LDO50_RS23905;Name=LDO50_RS23905;end_range=5544,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS23905;partial=true;pseudo=true;start_range=.,5270 NZ_CAJZAO010000336.1 Protein Homology CDS 5270 5544 . + 0 ID=cds-LDO50_RS23905;Parent=gene-LDO50_RS23905;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=5544,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611492.1;locus_tag=LDO50_RS23905;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,5270;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 6105 7295 . + . ID=gene-LDO50_RS23910;Name=LDO50_RS23910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23910;old_locus_tag=BVI1335_580009 NZ_CAJZAO010000336.1 Protein Homology CDS 6105 7295 . + 0 ID=cds-WP_011882448.1;Parent=gene-LDO50_RS23910;Dbxref=GenBank:WP_011882448.1;Name=WP_011882448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725232.1;locus_tag=LDO50_RS23910;product=EAL and HDOD domain-containing protein;protein_id=WP_011882448.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq pseudogene 7507 8996 . + . ID=gene-LDO50_RS30900;Name=LDO50_RS30900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS30900;old_locus_tag=BVI1335_580010;pseudo=true NZ_CAJZAO010000336.1 Protein Homology CDS 7507 8996 . + 0 ID=cds-LDO50_RS30900;Parent=gene-LDO50_RS30900;Note=frameshifted;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882447.1;locus_tag=LDO50_RS30900;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 9650 10525 . + . ID=gene-LDO50_RS23920;Name=LDO50_RS23920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23920;old_locus_tag=BVI1335_580012 NZ_CAJZAO010000336.1 Protein Homology CDS 9650 10525 . + 0 ID=cds-WP_034195178.1;Parent=gene-LDO50_RS23920;Dbxref=GenBank:WP_034195178.1;Name=WP_034195178.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882445.1;locus_tag=LDO50_RS23920;product=helix-turn-helix transcriptional regulator;protein_id=WP_034195178.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 10537 11493 . - . ID=gene-LDO50_RS23925;Name=LDO50_RS23925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23925;old_locus_tag=BVI1335_580013 NZ_CAJZAO010000336.1 Protein Homology CDS 10537 11493 . - 0 ID=cds-WP_059463122.1;Parent=gene-LDO50_RS23925;Dbxref=GenBank:WP_059463122.1;Name=WP_059463122.1;Ontology_term=GO:0016788,GO:0051499;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA,D-aminoacyl-tRNA deacylase activity|0051499||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725228.1;locus_tag=LDO50_RS23925;product=D-aminoacyl-tRNA deacylase;protein_id=WP_059463122.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 11525 12127 . - . ID=gene-LDO50_RS23930;Name=LDO50_RS23930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23930;old_locus_tag=BVI1335_580014 NZ_CAJZAO010000336.1 Protein Homology CDS 11525 12127 . - 0 ID=cds-WP_011882443.1;Parent=gene-LDO50_RS23930;Dbxref=GenBank:WP_011882443.1;Name=WP_011882443.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882443.1;locus_tag=LDO50_RS23930;product=LysE family translocator;protein_id=WP_011882443.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 12128 12940 . - . ID=gene-LDO50_RS23935;Name=LDO50_RS23935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23935;old_locus_tag=BVI1335_580015 NZ_CAJZAO010000336.1 Protein Homology CDS 12128 12940 . - 0 ID=cds-WP_176043822.1;Parent=gene-LDO50_RS23935;Dbxref=GenBank:WP_176043822.1;Name=WP_176043822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882442.1;locus_tag=LDO50_RS23935;product=formyl transferase;protein_id=WP_176043822.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 12937 15519 . - . ID=gene-LDO50_RS23940;Name=LDO50_RS23940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23940;old_locus_tag=BVI1335_580016 NZ_CAJZAO010000336.1 Protein Homology CDS 12937 15519 . - 0 ID=cds-WP_224020197.1;Parent=gene-LDO50_RS23940;Dbxref=GenBank:WP_224020197.1;Name=WP_224020197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725226.1;locus_tag=LDO50_RS23940;product=lyase family protein;protein_id=WP_224020197.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 15523 16485 . - . ID=gene-LDO50_RS23945;Name=LDO50_RS23945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23945;old_locus_tag=BVI1335_580017 NZ_CAJZAO010000336.1 Protein Homology CDS 15523 16485 . - 0 ID=cds-WP_224020198.1;Parent=gene-LDO50_RS23945;Dbxref=GenBank:WP_224020198.1;Name=WP_224020198.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882440.1;locus_tag=LDO50_RS23945;product=PLP-dependent cysteine synthase family protein;protein_id=WP_224020198.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 16537 17439 . - . ID=gene-LDO50_RS23950;Name=LDO50_RS23950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23950;old_locus_tag=BVI1335_580018 NZ_CAJZAO010000336.1 Protein Homology CDS 16537 17439 . - 0 ID=cds-WP_011882439.1;Parent=gene-LDO50_RS23950;Dbxref=GenBank:WP_011882439.1;Name=WP_011882439.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882439.1;locus_tag=LDO50_RS23950;product=GHMP family kinase ATP-binding protein;protein_id=WP_011882439.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 18040 18849 . + . ID=gene-LDO50_RS23955;Name=LDO50_RS23955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23955;old_locus_tag=BVI1335_580021 NZ_CAJZAO010000336.1 Protein Homology CDS 18040 18849 . + 0 ID=cds-WP_011882438.1;Parent=gene-LDO50_RS23955;Dbxref=GenBank:WP_011882438.1;Name=WP_011882438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882438.1;locus_tag=LDO50_RS23955;product=hypothetical protein;protein_id=WP_011882438.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 18919 19755 . + . ID=gene-LDO50_RS23960;Name=LDO50_RS23960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23960;old_locus_tag=BVI1335_580022 NZ_CAJZAO010000336.1 Protein Homology CDS 18919 19755 . + 0 ID=cds-WP_069240307.1;Parent=gene-LDO50_RS23960;Dbxref=GenBank:WP_069240307.1;Name=WP_069240307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725224.1;locus_tag=LDO50_RS23960;product=alpha/beta fold hydrolase;protein_id=WP_069240307.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 19838 21433 . + . ID=gene-LDO50_RS23965;Name=LDO50_RS23965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23965;old_locus_tag=BVI1335_580023 NZ_CAJZAO010000336.1 Protein Homology CDS 19838 21433 . + 0 ID=cds-WP_175994273.1;Parent=gene-LDO50_RS23965;Dbxref=GenBank:WP_175994273.1;Name=WP_175994273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882436.1;locus_tag=LDO50_RS23965;product=amino acid adenylation domain-containing protein;protein_id=WP_175994273.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 21366 21623 . + . ID=gene-LDO50_RS23970;Name=LDO50_RS23970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23970;old_locus_tag=BVI1335_580024 NZ_CAJZAO010000336.1 Protein Homology CDS 21366 21623 . + 0 ID=cds-WP_034195170.1;Parent=gene-LDO50_RS23970;Dbxref=GenBank:WP_034195170.1;Name=WP_034195170.1;Ontology_term=GO:0006633,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749750.1;locus_tag=LDO50_RS23970;product=acyl carrier protein;protein_id=WP_034195170.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 21653 22576 . + . ID=gene-LDO50_RS23975;Name=LDO50_RS23975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23975;old_locus_tag=BVI1335_580025 NZ_CAJZAO010000336.1 Protein Homology CDS 21653 22576 . + 0 ID=cds-WP_014725222.1;Parent=gene-LDO50_RS23975;Dbxref=GenBank:WP_014725222.1;Name=WP_014725222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725222.1;locus_tag=LDO50_RS23975;product=chlorinating enzyme;protein_id=WP_014725222.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 22666 22902 . + . ID=gene-LDO50_RS23980;Name=LDO50_RS23980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23980;old_locus_tag=BVI1335_580026 NZ_CAJZAO010000336.1 Protein Homology CDS 22666 22902 . + 0 ID=cds-WP_011882433.1;Parent=gene-LDO50_RS23980;Dbxref=GenBank:WP_011882433.1;Name=WP_011882433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882433.1;locus_tag=LDO50_RS23980;product=phosphopantetheine-binding protein;protein_id=WP_011882433.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 22929 23804 . + . ID=gene-LDO50_RS23985;Name=LDO50_RS23985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23985;old_locus_tag=BVI1335_580027 NZ_CAJZAO010000336.1 Protein Homology CDS 22929 23804 . + 0 ID=cds-WP_124259753.1;Parent=gene-LDO50_RS23985;Dbxref=GenBank:WP_124259753.1;Name=WP_124259753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725220.1;locus_tag=LDO50_RS23985;product=alpha/beta fold hydrolase;protein_id=WP_124259753.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 23801 24379 . + . ID=gene-LDO50_RS23990;Name=LDO50_RS23990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23990;old_locus_tag=BVI1335_580028 NZ_CAJZAO010000336.1 Protein Homology CDS 23801 24379 . + 0 ID=cds-WP_046423467.1;Parent=gene-LDO50_RS23990;Dbxref=GenBank:WP_046423467.1;Name=WP_046423467.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882431.1;locus_tag=LDO50_RS23990;product=GNAT family N-acetyltransferase;protein_id=WP_046423467.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 24445 25068 . + . ID=gene-LDO50_RS23995;Name=LDO50_RS23995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS23995;old_locus_tag=BVI1335_580029 NZ_CAJZAO010000336.1 Protein Homology CDS 24445 25068 . + 0 ID=cds-WP_011882430.1;Parent=gene-LDO50_RS23995;Dbxref=GenBank:WP_011882430.1;Name=WP_011882430.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882430.1;locus_tag=LDO50_RS23995;product=LysE family translocator;protein_id=WP_011882430.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 25090 25917 . + . ID=gene-LDO50_RS24000;Name=LDO50_RS24000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24000;old_locus_tag=BVI1335_580030 NZ_CAJZAO010000336.1 Protein Homology CDS 25090 25917 . + 0 ID=cds-WP_224020200.1;Parent=gene-LDO50_RS24000;Dbxref=GenBank:WP_224020200.1;Name=WP_224020200.1;Ontology_term=GO:0009058;gbkey=CDS;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725218.1;locus_tag=LDO50_RS24000;product=thioesterase II family protein;protein_id=WP_224020200.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 26016 27488 . + . ID=gene-LDO50_RS24005;Name=LDO50_RS24005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24005;old_locus_tag=BVI1335_580031 NZ_CAJZAO010000336.1 Protein Homology CDS 26016 27488 . + 0 ID=cds-WP_224020201.1;Parent=gene-LDO50_RS24005;Dbxref=GenBank:WP_224020201.1;Name=WP_224020201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725217.1;locus_tag=LDO50_RS24005;product=gamma-glutamyltransferase;protein_id=WP_224020201.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 27523 29046 . + . ID=gene-LDO50_RS24010;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=LDO50_RS24010;old_locus_tag=BVI1335_580032 NZ_CAJZAO010000336.1 Protein Homology CDS 27523 29046 . + 0 ID=cds-WP_224020202.1;Parent=gene-LDO50_RS24010;Dbxref=GenBank:WP_224020202.1;Name=WP_224020202.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882427.1;locus_tag=LDO50_RS24010;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_224020202.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 29096 29674 . + . ID=gene-LDO50_RS24015;Name=LDO50_RS24015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24015;old_locus_tag=BVI1335_580033 NZ_CAJZAO010000336.1 Protein Homology CDS 29096 29674 . + 0 ID=cds-WP_059696305.1;Parent=gene-LDO50_RS24015;Dbxref=GenBank:WP_059696305.1;Name=WP_059696305.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725215.1;locus_tag=LDO50_RS24015;product=LysE family translocator;protein_id=WP_059696305.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 30035 30838 . + . ID=gene-LDO50_RS24020;Name=LDO50_RS24020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24020;old_locus_tag=BVI1335_580034 NZ_CAJZAO010000336.1 Protein Homology CDS 30035 30838 . + 0 ID=cds-WP_059696304.1;Parent=gene-LDO50_RS24020;Dbxref=GenBank:WP_059696304.1;Name=WP_059696304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603116.1;locus_tag=LDO50_RS24020;product=transporter substrate-binding domain-containing protein;protein_id=WP_059696304.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 30844 31578 . + . ID=gene-LDO50_RS24025;Name=LDO50_RS24025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24025;old_locus_tag=BVI1335_580035 NZ_CAJZAO010000336.1 Protein Homology CDS 30844 31578 . + 0 ID=cds-WP_014725213.1;Parent=gene-LDO50_RS24025;Dbxref=GenBank:WP_014725213.1;Name=WP_014725213.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092711.1;locus_tag=LDO50_RS24025;product=ABC transporter permease;protein_id=WP_014725213.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 31575 32339 . + . ID=gene-LDO50_RS24030;Name=LDO50_RS24030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24030;old_locus_tag=BVI1335_580036 NZ_CAJZAO010000336.1 Protein Homology CDS 31575 32339 . + 0 ID=cds-WP_059475850.1;Parent=gene-LDO50_RS24030;Dbxref=GenBank:WP_059475850.1;Name=WP_059475850.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725212.1;locus_tag=LDO50_RS24030;product=ABC transporter permease;protein_id=WP_059475850.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 32366 33748 . + . ID=gene-LDO50_RS24035;Name=LDO50_RS24035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24035;old_locus_tag=BVI1335_580037 NZ_CAJZAO010000336.1 Protein Homology CDS 32366 33748 . + 0 ID=cds-WP_059475849.1;Parent=gene-LDO50_RS24035;Dbxref=GenBank:WP_059475849.1;Name=WP_059475849.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604101.1;locus_tag=LDO50_RS24035;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_059475849.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 34162 34350 . - . ID=gene-LDO50_RS24040;Name=LDO50_RS24040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24040;old_locus_tag=BVI1335_580039 NZ_CAJZAO010000336.1 GeneMarkS-2+ CDS 34162 34350 . - 0 ID=cds-WP_126220882.1;Parent=gene-LDO50_RS24040;Dbxref=GenBank:WP_126220882.1;Name=WP_126220882.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS24040;product=hypothetical protein;protein_id=WP_126220882.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 34507 35694 . + . ID=gene-LDO50_RS24045;Name=LDO50_RS24045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24045;old_locus_tag=BVI1335_580041 NZ_CAJZAO010000336.1 Protein Homology CDS 34507 35694 . + 0 ID=cds-WP_059734389.1;Parent=gene-LDO50_RS24045;Dbxref=GenBank:WP_059734389.1;Name=WP_059734389.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725210.1;locus_tag=LDO50_RS24045;product=porin;protein_id=WP_059734389.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 35932 36363 . - . ID=gene-LDO50_RS24050;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=LDO50_RS24050;old_locus_tag=BVI1335_580042 NZ_CAJZAO010000336.1 Protein Homology CDS 35932 36363 . - 0 ID=cds-WP_011882424.1;Parent=gene-LDO50_RS24050;Dbxref=GenBank:WP_011882424.1;Name=WP_011882424.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724735.1;locus_tag=LDO50_RS24050;product=type VI secretion system baseplate subunit TssE;protein_id=WP_011882424.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 36376 37038 . - . ID=gene-LDO50_RS24055;Name=LDO50_RS24055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24055;old_locus_tag=BVI1335_580043 NZ_CAJZAO010000336.1 Protein Homology CDS 36376 37038 . - 0 ID=cds-WP_011882423.1;Parent=gene-LDO50_RS24055;Dbxref=GenBank:WP_011882423.1;Name=WP_011882423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882423.1;locus_tag=LDO50_RS24055;product=DotU family type IV/VI secretion system protein;protein_id=WP_011882423.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 37035 38381 . - . ID=gene-LDO50_RS24060;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=LDO50_RS24060;old_locus_tag=BVI1335_580044 NZ_CAJZAO010000336.1 Protein Homology CDS 37035 38381 . - 0 ID=cds-WP_011881735.1;Parent=gene-LDO50_RS24060;Dbxref=GenBank:WP_011881735.1;Name=WP_011881735.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759179.1;locus_tag=LDO50_RS24060;product=type VI secretion system baseplate subunit TssK;protein_id=WP_011881735.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 38438 39760 . - . ID=gene-LDO50_RS24065;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=LDO50_RS24065;old_locus_tag=BVI1335_580045 NZ_CAJZAO010000336.1 Protein Homology CDS 38438 39760 . - 0 ID=cds-WP_014725205.1;Parent=gene-LDO50_RS24065;Dbxref=GenBank:WP_014725205.1;Name=WP_014725205.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725205.1;locus_tag=LDO50_RS24065;product=type VI secretion system contractile sheath large subunit;protein_id=WP_014725205.1;transl_table=11 NZ_CAJZAO010000336.1 RefSeq gene 40050 40476 . + . ID=gene-LDO50_RS24070;Name=LDO50_RS24070;end_range=40476,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24070;partial=true NZ_CAJZAO010000336.1 Protein Homology CDS 40050 40476 . + 0 ID=cds-WP_224020205.1;Parent=gene-LDO50_RS24070;Dbxref=GenBank:WP_224020205.1;Name=WP_224020205.1;end_range=40476,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882421.1;locus_tag=LDO50_RS24070;partial=true;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_224020205.1;transl_table=11 ##sequence-region NZ_CAJZAO010000337.1 1 26923 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000337.1 RefSeq region 1 26923 . + . ID=NZ_CAJZAO010000337.1:1..26923;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_59 NZ_CAJZAO010000337.1 RefSeq gene 1 545 . + . ID=gene-LDO50_RS24075;Name=LDO50_RS24075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24075;old_locus_tag=BVI1335_590001;partial=true;start_range=.,1 NZ_CAJZAO010000337.1 Protein Homology CDS 1 545 . + 2 ID=cds-WP_253074467.1;Parent=gene-LDO50_RS24075;Dbxref=GenBank:WP_253074467.1;Name=WP_253074467.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372550.1;locus_tag=LDO50_RS24075;partial=true;product=sensor histidine kinase;protein_id=WP_253074467.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq gene 681 1115 . - . ID=gene-LDO50_RS24080;Name=LDO50_RS24080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24080;old_locus_tag=BVI1335_590002 NZ_CAJZAO010000337.1 Protein Homology CDS 681 1115 . - 0 ID=cds-WP_011880355.1;Parent=gene-LDO50_RS24080;Dbxref=GenBank:WP_011880355.1;Name=WP_011880355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009898199.1;locus_tag=LDO50_RS24080;product=hypothetical protein;protein_id=WP_011880355.1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq gene 1337 1684 . + . ID=gene-LDO50_RS24085;Name=LDO50_RS24085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24085;old_locus_tag=BVI1335_590003 NZ_CAJZAO010000337.1 Protein Homology CDS 1337 1684 . + 0 ID=cds-WP_011880354.1;Parent=gene-LDO50_RS24085;Dbxref=GenBank:WP_011880354.1;Name=WP_011880354.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880354.1;locus_tag=LDO50_RS24085;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_011880354.1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq gene 1805 2701 . + . ID=gene-LDO50_RS24090;Name=LDO50_RS24090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24090;old_locus_tag=BVI1335_590004 NZ_CAJZAO010000337.1 Protein Homology CDS 1805 2701 . + 0 ID=cds-WP_224020210.1;Parent=gene-LDO50_RS24090;Dbxref=GenBank:WP_224020210.1;Name=WP_224020210.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880353.1;locus_tag=LDO50_RS24090;product=cation diffusion facilitator family transporter;protein_id=WP_224020210.1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq gene 2746 3363 . - . ID=gene-LDO50_RS24095;Name=LDO50_RS24095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24095;old_locus_tag=BVI1335_590005 NZ_CAJZAO010000337.1 Protein Homology CDS 2746 3363 . - 0 ID=cds-WP_014725991.1;Parent=gene-LDO50_RS24095;Dbxref=GenBank:WP_014725991.1;Name=WP_014725991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880352.1;locus_tag=LDO50_RS24095;product=VTT domain-containing protein;protein_id=WP_014725991.1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq gene 3581 5872 . + . ID=gene-LDO50_RS24100;Name=LDO50_RS24100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24100;old_locus_tag=BVI1335_590006 NZ_CAJZAO010000337.1 Protein Homology CDS 3581 5872 . + 0 ID=cds-WP_212167457.1;Parent=gene-LDO50_RS24100;Dbxref=GenBank:WP_212167457.1;Name=WP_212167457.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880351.1;locus_tag=LDO50_RS24100;product=heavy metal translocating P-type ATPase;protein_id=WP_212167457.1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq gene 5885 6835 . - . ID=gene-LDO50_RS24105;Name=LDO50_RS24105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24105;old_locus_tag=BVI1335_590007 NZ_CAJZAO010000337.1 Protein Homology CDS 5885 6835 . - 0 ID=cds-WP_059463982.1;Parent=gene-LDO50_RS24105;Dbxref=GenBank:WP_059463982.1;Name=WP_059463982.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880350.1;locus_tag=LDO50_RS24105;product=universal stress protein;protein_id=WP_059463982.1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq gene 6988 7572 . - . ID=gene-LDO50_RS24110;Name=LDO50_RS24110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24110;old_locus_tag=BVI1335_590008 NZ_CAJZAO010000337.1 Protein Homology CDS 6988 7572 . - 0 ID=cds-WP_034193957.1;Parent=gene-LDO50_RS24110;Dbxref=GenBank:WP_034193957.1;Name=WP_034193957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880349.1;locus_tag=LDO50_RS24110;product=hemerythrin domain-containing protein;protein_id=WP_034193957.1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq gene 7856 8422 . - . ID=gene-LDO50_RS24115;Name=LDO50_RS24115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24115;old_locus_tag=BVI1335_590010 NZ_CAJZAO010000337.1 Protein Homology CDS 7856 8422 . - 0 ID=cds-WP_224020206.1;Parent=gene-LDO50_RS24115;Dbxref=GenBank:WP_224020206.1;Name=WP_224020206.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725986.1;locus_tag=LDO50_RS24115;product=cytochrome b;protein_id=WP_224020206.1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq gene 8464 8838 . - . ID=gene-LDO50_RS24120;Name=LDO50_RS24120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24120;old_locus_tag=BVI1335_590011 NZ_CAJZAO010000337.1 Protein Homology CDS 8464 8838 . - 0 ID=cds-WP_034193919.1;Parent=gene-LDO50_RS24120;Dbxref=GenBank:WP_034193919.1;Name=WP_034193919.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0020037,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,heme binding|0020037||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880347.1;locus_tag=LDO50_RS24120;product=cytochrome b562;protein_id=WP_034193919.1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq gene 9002 9664 . + . ID=gene-LDO50_RS24125;Name=LDO50_RS24125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24125;old_locus_tag=BVI1335_590013 NZ_CAJZAO010000337.1 Protein Homology CDS 9002 9664 . + 0 ID=cds-WP_011880346.1;Parent=gene-LDO50_RS24125;Dbxref=GenBank:WP_011880346.1;Name=WP_011880346.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880346.1;locus_tag=LDO50_RS24125;product=response regulator transcription factor;protein_id=WP_011880346.1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq gene 9664 11025 . + . ID=gene-LDO50_RS24130;Name=LDO50_RS24130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24130;old_locus_tag=BVI1335_590012 NZ_CAJZAO010000337.1 Protein Homology CDS 9664 11025 . + 0 ID=cds-WP_224020211.1;Parent=gene-LDO50_RS24130;Dbxref=GenBank:WP_224020211.1;Name=WP_224020211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725985.1;locus_tag=LDO50_RS24130;product=ATP-binding protein;protein_id=WP_224020211.1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq gene 11444 12250 . + . ID=gene-LDO50_RS24135;Name=LDO50_RS24135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24135;old_locus_tag=BVI1335_590014 NZ_CAJZAO010000337.1 Protein Homology CDS 11444 12250 . + 0 ID=cds-WP_011880344.1;Parent=gene-LDO50_RS24135;Dbxref=GenBank:WP_011880344.1;Name=WP_011880344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484387.1;locus_tag=LDO50_RS24135;product=transporter substrate-binding domain-containing protein;protein_id=WP_011880344.1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq gene 12341 13027 . + . ID=gene-LDO50_RS24140;Name=LDO50_RS24140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24140;old_locus_tag=BVI1335_590015 NZ_CAJZAO010000337.1 Protein Homology CDS 12341 13027 . + 0 ID=cds-WP_011880343.1;Parent=gene-LDO50_RS24140;Dbxref=GenBank:WP_011880343.1;Name=WP_011880343.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484385.1;locus_tag=LDO50_RS24140;product=amino acid ABC transporter permease;protein_id=WP_011880343.1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq gene 13024 13674 . + . ID=gene-LDO50_RS24145;Name=LDO50_RS24145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24145;old_locus_tag=BVI1335_590016 NZ_CAJZAO010000337.1 Protein Homology CDS 13024 13674 . + 0 ID=cds-WP_011880342.1;Parent=gene-LDO50_RS24145;Dbxref=GenBank:WP_011880342.1;Name=WP_011880342.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010097593.1;locus_tag=LDO50_RS24145;product=amino acid ABC transporter permease;protein_id=WP_011880342.1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq gene 13661 14410 . + . ID=gene-LDO50_RS24150;Name=LDO50_RS24150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24150;old_locus_tag=BVI1335_590017 NZ_CAJZAO010000337.1 Protein Homology CDS 13661 14410 . + 0 ID=cds-WP_011880341.1;Parent=gene-LDO50_RS24150;Dbxref=GenBank:WP_011880341.1;Name=WP_011880341.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545691.1;locus_tag=LDO50_RS24150;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_011880341.1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq gene 14758 16323 . + . ID=gene-LDO50_RS24155;Name=LDO50_RS24155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24155;old_locus_tag=BVI1335_590018 NZ_CAJZAO010000337.1 Protein Homology CDS 14758 16323 . + 0 ID=cds-WP_011880340.1;Parent=gene-LDO50_RS24155;Dbxref=GenBank:WP_011880340.1;Name=WP_011880340.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880340.1;locus_tag=LDO50_RS24155;product=methyl-accepting chemotaxis protein;protein_id=WP_011880340.1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq gene 16685 17698 . + . ID=gene-LDO50_RS24160;Name=LDO50_RS24160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24160;old_locus_tag=BVI1335_590019 NZ_CAJZAO010000337.1 Protein Homology CDS 16685 17698 . + 0 ID=cds-WP_011880339.1;Parent=gene-LDO50_RS24160;Dbxref=GenBank:WP_011880339.1;Name=WP_011880339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363507.1;locus_tag=LDO50_RS24160;product=hypothetical protein;protein_id=WP_011880339.1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq gene 18154 19008 . - . ID=gene-LDO50_RS24165;Name=LDO50_RS24165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24165;old_locus_tag=BVI1335_590020 NZ_CAJZAO010000337.1 Protein Homology CDS 18154 19008 . - 0 ID=cds-WP_059463979.1;Parent=gene-LDO50_RS24165;Dbxref=GenBank:WP_059463979.1;Name=WP_059463979.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725977.1;locus_tag=LDO50_RS24165;product=LysR family transcriptional regulator;protein_id=WP_059463979.1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq gene 19096 19323 . + . ID=gene-LDO50_RS24170;Name=LDO50_RS24170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24170;old_locus_tag=BVI1335_590021 NZ_CAJZAO010000337.1 GeneMarkS-2+ CDS 19096 19323 . + 0 ID=cds-WP_060043657.1;Parent=gene-LDO50_RS24170;Dbxref=GenBank:WP_060043657.1;Name=WP_060043657.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS24170;product=hypothetical protein;protein_id=WP_060043657.1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq gene 19332 20213 . + . ID=gene-LDO50_RS24175;Name=LDO50_RS24175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24175;old_locus_tag=BVI1335_590022 NZ_CAJZAO010000337.1 Protein Homology CDS 19332 20213 . + 0 ID=cds-WP_230939102.1;Parent=gene-LDO50_RS24175;Dbxref=GenBank:WP_230939102.1;Name=WP_230939102.1;Ontology_term=GO:0016491,GO:0050661,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725975.1;locus_tag=LDO50_RS24175;product=NAD(P)-dependent oxidoreductase;protein_id=WP_230939102.1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq gene 20517 21428 . + . ID=gene-LDO50_RS24180;Name=LDO50_RS24180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24180;old_locus_tag=BVI1335_590023 NZ_CAJZAO010000337.1 Protein Homology CDS 20517 21428 . + 0 ID=cds-WP_224020208.1;Parent=gene-LDO50_RS24180;Dbxref=GenBank:WP_224020208.1;Name=WP_224020208.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725974.1;locus_tag=LDO50_RS24180;product=LysR family transcriptional regulator;protein_id=WP_224020208.1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq gene 21765 23513 . + . ID=gene-LDO50_RS24185;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=LDO50_RS24185;old_locus_tag=BVI1335_590024 NZ_CAJZAO010000337.1 Protein Homology CDS 21765 23513 . + 0 ID=cds-WP_014725973.1;Parent=gene-LDO50_RS24185;Dbxref=GenBank:WP_014725973.1;Name=WP_014725973.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880332.1;locus_tag=LDO50_RS24185;product=D-lactate dehydrogenase;protein_id=WP_014725973.1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq gene 23570 24313 . + . ID=gene-LDO50_RS24190;Name=LDO50_RS24190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24190;old_locus_tag=BVI1335_590025 NZ_CAJZAO010000337.1 Protein Homology CDS 23570 24313 . + 0 ID=cds-WP_006481907.1;Parent=gene-LDO50_RS24190;Dbxref=GenBank:WP_006481907.1;Name=WP_006481907.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880331.1;locus_tag=LDO50_RS24190;product=(Fe-S)-binding protein;protein_id=WP_006481907.1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq gene 24310 25683 . + . ID=gene-LDO50_RS24195;Name=LDO50_RS24195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24195;old_locus_tag=BVI1335_590026 NZ_CAJZAO010000337.1 Protein Homology CDS 24310 25683 . + 0 ID=cds-WP_006481909.1;Parent=gene-LDO50_RS24195;Dbxref=GenBank:WP_006481909.1;Name=WP_006481909.1;Ontology_term=GO:0046872,GO:0051539;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481909.1;locus_tag=LDO50_RS24195;product=lactate utilization protein B;protein_id=WP_006481909.1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq gene 25680 26279 . + . ID=gene-LDO50_RS24200;Name=LDO50_RS24200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24200;old_locus_tag=BVI1335_590027 NZ_CAJZAO010000337.1 Protein Homology CDS 25680 26279 . + 0 ID=cds-WP_060043660.1;Parent=gene-LDO50_RS24200;Dbxref=GenBank:WP_060043660.1;Name=WP_060043660.1;Ontology_term=GO:0006089;gbkey=CDS;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481910.1;locus_tag=LDO50_RS24200;product=LutC/YkgG family protein;protein_id=WP_060043660.1;transl_table=11 NZ_CAJZAO010000337.1 RefSeq pseudogene 26296 26598 . + . ID=gene-LDO50_RS32025;Name=LDO50_RS32025;end_range=26598,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS32025;old_locus_tag=BVI1335_590028;partial=true;pseudo=true NZ_CAJZAO010000337.1 Protein Homology CDS 26296 26598 . + 0 ID=cds-LDO50_RS32025;Parent=gene-LDO50_RS32025;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=26598,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492766.1;locus_tag=LDO50_RS32025;partial=true;product=FUSC family protein;pseudo=true;transl_table=11 NZ_CAJZAO010000337.1 RefSeq pseudogene 26609 26923 . + . ID=gene-LDO50_RS24210;Name=LDO50_RS24210;end_range=26923,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS24210;partial=true;pseudo=true;start_range=.,26609 NZ_CAJZAO010000337.1 Protein Homology CDS 26609 26923 . + 0 ID=cds-LDO50_RS24210;Parent=gene-LDO50_RS24210;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=26923,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880330.1;locus_tag=LDO50_RS24210;partial=true;product=FUSC family protein;pseudo=true;start_range=.,26609;transl_table=11 ##sequence-region NZ_CAJZAO010000338.1 1 4539 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000338.1 RefSeq region 1 4539 . + . ID=NZ_CAJZAO010000338.1:1..4539;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_6 NZ_CAJZAO010000338.1 RefSeq pseudogene 1 91 . - . ID=gene-LDO50_RS24215;Name=LDO50_RS24215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS24215;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000338.1 Protein Homology CDS 1 91 . - 0 ID=cds-LDO50_RS24215;Parent=gene-LDO50_RS24215;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496495.1;locus_tag=LDO50_RS24215;partial=true;product=HAD family phosphatase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000338.1 RefSeq gene 88 939 . - . ID=gene-LDO50_RS24220;Name=LDO50_RS24220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24220;old_locus_tag=BVI1335_60002 NZ_CAJZAO010000338.1 Protein Homology CDS 88 939 . - 0 ID=cds-WP_014723543.1;Parent=gene-LDO50_RS24220;Dbxref=GenBank:WP_014723543.1;Name=WP_014723543.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484674.1;locus_tag=LDO50_RS24220;product=carbohydrate ABC transporter permease;protein_id=WP_014723543.1;transl_table=11 NZ_CAJZAO010000338.1 RefSeq gene 936 1883 . - . ID=gene-LDO50_RS24225;Name=LDO50_RS24225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24225;old_locus_tag=BVI1335_60003 NZ_CAJZAO010000338.1 Protein Homology CDS 936 1883 . - 0 ID=cds-WP_212173107.1;Parent=gene-LDO50_RS24225;Dbxref=GenBank:WP_212173107.1;Name=WP_212173107.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896200.1;locus_tag=LDO50_RS24225;product=carbohydrate ABC transporter permease;protein_id=WP_212173107.1;transl_table=11 NZ_CAJZAO010000338.1 RefSeq gene 1996 3321 . - . ID=gene-LDO50_RS24230;Name=LDO50_RS24230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24230;old_locus_tag=BVI1335_60004 NZ_CAJZAO010000338.1 Protein Homology CDS 1996 3321 . - 0 ID=cds-WP_011885876.1;Parent=gene-LDO50_RS24230;Dbxref=GenBank:WP_011885876.1;Name=WP_011885876.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601633.1;locus_tag=LDO50_RS24230;product=ABC transporter substrate-binding protein;protein_id=WP_011885876.1;transl_table=11 NZ_CAJZAO010000338.1 RefSeq gene 3432 4539 . - . ID=gene-LDO50_RS24235;Name=LDO50_RS24235;end_range=4539,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24235;old_locus_tag=BVI1335_60005;partial=true NZ_CAJZAO010000338.1 Protein Homology CDS 3432 4539 . - 1 ID=cds-WP_224020213.1;Parent=gene-LDO50_RS24235;Dbxref=GenBank:WP_224020213.1;Name=WP_224020213.1;Ontology_term=GO:0005975;end_range=4539,.;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885877.1;locus_tag=LDO50_RS24235;partial=true;product=class II D-tagatose-bisphosphate aldolase non-catalytic subunit;protein_id=WP_224020213.1;transl_table=11 ##sequence-region NZ_CAJZAO010000339.1 1 83385 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000339.1 RefSeq region 1 83385 . + . ID=NZ_CAJZAO010000339.1:1..83385;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_60 NZ_CAJZAO010000339.1 RefSeq pseudogene 1 64 . + . ID=gene-LDO50_RS24240;Name=LDO50_RS24240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS24240;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000339.1 Protein Homology CDS 1 64 . + 1 ID=cds-LDO50_RS24240;Parent=gene-LDO50_RS24240;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760400.1;locus_tag=LDO50_RS24240;partial=true;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 176 673 . + . ID=gene-LDO50_RS24245;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=LDO50_RS24245;old_locus_tag=BVI1335_600001 NZ_CAJZAO010000339.1 Protein Homology CDS 176 673 . + 0 ID=cds-WP_006398238.1;Parent=gene-LDO50_RS24245;Dbxref=GenBank:WP_006398238.1;Name=WP_006398238.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195249.1;locus_tag=LDO50_RS24245;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_006398238.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 733 999 . + . ID=gene-LDO50_RS24250;Name=LDO50_RS24250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24250;old_locus_tag=BVI1335_600002 NZ_CAJZAO010000339.1 Protein Homology CDS 733 999 . + 0 ID=cds-WP_011886070.1;Parent=gene-LDO50_RS24250;Dbxref=GenBank:WP_011886070.1;Name=WP_011886070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886070.1;locus_tag=LDO50_RS24250;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_011886070.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 1070 2137 . - . ID=gene-LDO50_RS24255;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=LDO50_RS24255;old_locus_tag=BVI1335_600003 NZ_CAJZAO010000339.1 Protein Homology CDS 1070 2137 . - 0 ID=cds-WP_011886069.1;Parent=gene-LDO50_RS24255;Dbxref=GenBank:WP_011886069.1;Name=WP_011886069.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212697.1;locus_tag=LDO50_RS24255;product=histidinol-phosphate transaminase;protein_id=WP_011886069.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 2272 2871 . - . ID=gene-LDO50_RS24260;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=LDO50_RS24260;old_locus_tag=BVI1335_600004 NZ_CAJZAO010000339.1 Protein Homology CDS 2272 2871 . - 0 ID=cds-WP_043291539.1;Parent=gene-LDO50_RS24260;Dbxref=GenBank:WP_043291539.1;Name=WP_043291539.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753283.1;locus_tag=LDO50_RS24260;product=aminoacyl-tRNA hydrolase;protein_id=WP_043291539.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 2989 3594 . - . ID=gene-LDO50_RS24265;Name=LDO50_RS24265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24265;old_locus_tag=BVI1335_600005 NZ_CAJZAO010000339.1 Protein Homology CDS 2989 3594 . - 0 ID=cds-WP_011886067.1;Parent=gene-LDO50_RS24265;Dbxref=GenBank:WP_011886067.1;Name=WP_011886067.1;Ontology_term=GO:0006412,GO:0003735,GO:0008097;gbkey=CDS;go_function=structural constituent of ribosome|0003735||IEA,5S rRNA binding|0008097||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353236.1;locus_tag=LDO50_RS24265;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_011886067.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 3756 4718 . - . ID=gene-LDO50_RS24270;Name=LDO50_RS24270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24270;old_locus_tag=BVI1335_600006 NZ_CAJZAO010000339.1 Protein Homology CDS 3756 4718 . - 0 ID=cds-WP_011886066.1;Parent=gene-LDO50_RS24270;Dbxref=GenBank:WP_011886066.1;Name=WP_011886066.1;Ontology_term=GO:0006015,GO:0009156,GO:0009165,GO:0016310,GO:0000287,GO:0004749,GO:0005524,GO:0016301,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,ribose phosphate diphosphokinase activity|0004749||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA,ribonucleoside monophosphate biosynthetic process|0009156||IEA,nucleotide biosynthetic process|0009165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753281.1;locus_tag=LDO50_RS24270;product=ribose-phosphate pyrophosphokinase;protein_id=WP_011886066.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 4763 4839 . - . ID=gene-LDO50_RS24275;Name=LDO50_RS24275;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS24275;old_locus_tag=BVI1335_TRNA37 NZ_CAJZAO010000339.1 tRNAscan-SE tRNA 4763 4839 . - . ID=rna-LDO50_RS24275;Parent=gene-LDO50_RS24275;anticodon=(pos:complement(4803..4805));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS24275;product=tRNA-Gln NZ_CAJZAO010000339.1 tRNAscan-SE exon 4763 4839 . - . ID=exon-LDO50_RS24275-1;Parent=rna-LDO50_RS24275;anticodon=(pos:complement(4803..4805));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS24275;product=tRNA-Gln NZ_CAJZAO010000339.1 RefSeq gene 4893 5774 . - . ID=gene-LDO50_RS24280;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=LDO50_RS24280;old_locus_tag=BVI1335_600007 NZ_CAJZAO010000339.1 Protein Homology CDS 4893 5774 . - 0 ID=cds-WP_059475371.1;Parent=gene-LDO50_RS24280;Dbxref=GenBank:WP_059475371.1;Name=WP_059475371.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600162.1;locus_tag=LDO50_RS24280;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_059475371.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 5802 6422 . - . ID=gene-LDO50_RS24285;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=LDO50_RS24285;old_locus_tag=BVI1335_600008 NZ_CAJZAO010000339.1 Protein Homology CDS 5802 6422 . - 0 ID=cds-WP_059461218.1;Parent=gene-LDO50_RS24285;Dbxref=GenBank:WP_059461218.1;Name=WP_059461218.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415468.1;locus_tag=LDO50_RS24285;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_059461218.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq pseudogene 6422 7918 . - . ID=gene-LDO50_RS24290;Name=LDO50_RS24290;end_range=7918,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS24290;old_locus_tag=BVI1335_600009;partial=true;pseudo=true NZ_CAJZAO010000339.1 Protein Homology CDS 6422 7918 . - 0 ID=cds-LDO50_RS24290;Parent=gene-LDO50_RS24290;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=7918,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415510.1;locus_tag=LDO50_RS24290;partial=true;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11 NZ_CAJZAO010000339.1 RefSeq pseudogene 7936 8394 . - . ID=gene-LDO50_RS24295;Name=LDO50_RS24295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS24295;partial=true;pseudo=true;start_range=.,7936 NZ_CAJZAO010000339.1 Protein Homology CDS 7936 8394 . - 0 ID=cds-LDO50_RS24295;Parent=gene-LDO50_RS24295;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415510.1;locus_tag=LDO50_RS24295;partial=true;product=tetratricopeptide repeat protein;pseudo=true;start_range=.,7936;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 8481 9308 . + . ID=gene-LDO50_RS24300;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=LDO50_RS24300;old_locus_tag=BVI1335_600011 NZ_CAJZAO010000339.1 Protein Homology CDS 8481 9308 . + 0 ID=cds-WP_011886062.1;Parent=gene-LDO50_RS24300;Dbxref=GenBank:WP_011886062.1;Name=WP_011886062.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012431652.1;locus_tag=LDO50_RS24300;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_011886062.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 9346 10452 . + . ID=gene-LDO50_RS24305;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=LDO50_RS24305;old_locus_tag=BVI1335_600012 NZ_CAJZAO010000339.1 Protein Homology CDS 9346 10452 . + 0 ID=cds-WP_059475370.1;Parent=gene-LDO50_RS24305;Dbxref=GenBank:WP_059475370.1;Name=WP_059475370.1;Ontology_term=GO:0006284,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009972864.1;locus_tag=LDO50_RS24305;product=A/G-specific adenine glycosylase;protein_id=WP_059475370.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 10570 11208 . - . ID=gene-LDO50_RS24310;Name=LDO50_RS24310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24310;old_locus_tag=BVI1335_600013 NZ_CAJZAO010000339.1 Protein Homology CDS 10570 11208 . - 0 ID=cds-WP_011886060.1;Parent=gene-LDO50_RS24310;Dbxref=GenBank:WP_011886060.1;Name=WP_011886060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600699.1;locus_tag=LDO50_RS24310;product=LON peptidase substrate-binding domain-containing protein;protein_id=WP_011886060.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 11236 12144 . - . ID=gene-LDO50_RS24315;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=LDO50_RS24315;old_locus_tag=BVI1335_600014 NZ_CAJZAO010000339.1 Protein Homology CDS 11236 12144 . - 0 ID=cds-WP_034192566.1;Parent=gene-LDO50_RS24315;Dbxref=GenBank:WP_034192566.1;Name=WP_034192566.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763369.1;locus_tag=LDO50_RS24315;product=RNase adapter RapZ;protein_id=WP_034192566.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 12220 13188 . - . ID=gene-LDO50_RS24320;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=LDO50_RS24320;old_locus_tag=BVI1335_600015 NZ_CAJZAO010000339.1 Protein Homology CDS 12220 13188 . - 0 ID=cds-WP_006483133.1;Parent=gene-LDO50_RS24320;Dbxref=GenBank:WP_006483133.1;Name=WP_006483133.1;Ontology_term=GO:0000160,GO:0006109,GO:0000155,GO:0005524;gbkey=CDS;gene=hprK;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of carbohydrate metabolic process|0006109||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877041.1;locus_tag=LDO50_RS24320;product=HPr(Ser) kinase/phosphatase;protein_id=WP_006483133.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 13318 13830 . - . ID=gene-LDO50_RS24325;Name=LDO50_RS24325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24325;old_locus_tag=BVI1335_600016 NZ_CAJZAO010000339.1 Protein Homology CDS 13318 13830 . - 0 ID=cds-WP_011886058.1;Parent=gene-LDO50_RS24325;Dbxref=GenBank:WP_011886058.1;Name=WP_011886058.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534308.1;locus_tag=LDO50_RS24325;product=PTS sugar transporter subunit IIA;protein_id=WP_011886058.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 14025 14384 . - . ID=gene-LDO50_RS24330;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=LDO50_RS24330;old_locus_tag=BVI1335_600017 NZ_CAJZAO010000339.1 Protein Homology CDS 14025 14384 . - 0 ID=cds-WP_011886057.1;Parent=gene-LDO50_RS24330;Dbxref=GenBank:WP_011886057.1;Name=WP_011886057.1;Ontology_term=GO:0045182,GO:0005840;gbkey=CDS;gene=hpf;go_component=ribosome|0005840||IEA;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195219.1;locus_tag=LDO50_RS24330;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;protein_id=WP_011886057.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 14543 16048 . - . ID=gene-LDO50_RS24335;Name=LDO50_RS24335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24335;old_locus_tag=BVI1335_600018 NZ_CAJZAO010000339.1 Protein Homology CDS 14543 16048 . - 0 ID=cds-WP_059889318.1;Parent=gene-LDO50_RS24335;Dbxref=GenBank:WP_059889318.1;Name=WP_059889318.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195216.1;locus_tag=LDO50_RS24335;product=RNA polymerase factor sigma-54;protein_id=WP_059889318.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 16211 16987 . - . ID=gene-LDO50_RS24340;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=LDO50_RS24340;old_locus_tag=BVI1335_600019 NZ_CAJZAO010000339.1 Protein Homology CDS 16211 16987 . - 0 ID=cds-WP_011886055.1;Parent=gene-LDO50_RS24340;Dbxref=GenBank:WP_011886055.1;Name=WP_011886055.1;Ontology_term=GO:0015920,GO:0015221,GO:0042626,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886055.1;locus_tag=LDO50_RS24340;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_011886055.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 16984 17649 . - . ID=gene-LDO50_RS24345;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=LDO50_RS24345;old_locus_tag=BVI1335_600020 NZ_CAJZAO010000339.1 Protein Homology CDS 16984 17649 . - 0 ID=cds-WP_011886054.1;Parent=gene-LDO50_RS24345;Dbxref=GenBank:WP_011886054.1;Name=WP_011886054.1;Ontology_term=GO:0015920,GO:0001530,GO:0042597;gbkey=CDS;gene=lptA;go_component=periplasmic space|0042597||IEA;go_function=lipopolysaccharide binding|0001530||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752624.1;locus_tag=LDO50_RS24345;product=lipopolysaccharide transport periplasmic protein LptA;protein_id=WP_011886054.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 17670 18284 . - . ID=gene-LDO50_RS24350;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=LDO50_RS24350;old_locus_tag=BVI1335_600021 NZ_CAJZAO010000339.1 Protein Homology CDS 17670 18284 . - 0 ID=cds-WP_011886053.1;Parent=gene-LDO50_RS24350;Dbxref=GenBank:WP_011886053.1;Name=WP_011886053.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptC;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893044.1;locus_tag=LDO50_RS24350;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_011886053.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 18288 18824 . - . ID=gene-LDO50_RS24355;Name=LDO50_RS24355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24355;old_locus_tag=BVI1335_600022 NZ_CAJZAO010000339.1 Protein Homology CDS 18288 18824 . - 0 ID=cds-WP_011886052.1;Parent=gene-LDO50_RS24355;Dbxref=GenBank:WP_011886052.1;Name=WP_011886052.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010113872.1;locus_tag=LDO50_RS24355;product=KdsC family phosphatase;protein_id=WP_011886052.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 18824 19807 . - . ID=gene-LDO50_RS24360;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=LDO50_RS24360;old_locus_tag=BVI1335_600023 NZ_CAJZAO010000339.1 Protein Homology CDS 18824 19807 . - 0 ID=cds-WP_014723665.1;Parent=gene-LDO50_RS24360;Dbxref=GenBank:WP_014723665.1;Name=WP_014723665.1;gbkey=CDS;gene=kdsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195206.1;locus_tag=LDO50_RS24360;product=arabinose 5-phosphate isomerase KdsD;protein_id=WP_014723665.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 19933 21939 . + . ID=gene-LDO50_RS24365;Name=LDO50_RS24365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24365;old_locus_tag=BVI1335_600024 NZ_CAJZAO010000339.1 Protein Homology CDS 19933 21939 . + 0 ID=cds-WP_011886050.1;Parent=gene-LDO50_RS24365;Dbxref=GenBank:WP_011886050.1;Name=WP_011886050.1;Ontology_term=GO:0006812,GO:0055085,GO:1902600,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195204.1;locus_tag=LDO50_RS24365;product=monovalent cation:proton antiporter family protein;protein_id=WP_011886050.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 22034 22600 . + . ID=gene-LDO50_RS24370;Name=LDO50_RS24370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24370;old_locus_tag=BVI1335_600025 NZ_CAJZAO010000339.1 Protein Homology CDS 22034 22600 . + 0 ID=cds-WP_011886049.1;Parent=gene-LDO50_RS24370;Dbxref=GenBank:WP_011886049.1;Name=WP_011886049.1;Ontology_term=GO:0006168,GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA,nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212706.1;locus_tag=LDO50_RS24370;product=adenine phosphoribosyltransferase;protein_id=WP_011886049.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 22635 23249 . + . ID=gene-LDO50_RS24375;Name=LDO50_RS24375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24375;old_locus_tag=BVI1335_600026 NZ_CAJZAO010000339.1 Protein Homology CDS 22635 23249 . + 0 ID=cds-WP_011886048.1;Parent=gene-LDO50_RS24375;Dbxref=GenBank:WP_011886048.1;Name=WP_011886048.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896023.1;locus_tag=LDO50_RS24375;product=LysE family translocator;protein_id=WP_011886048.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 23255 24112 . + . ID=gene-LDO50_RS24380;Name=LDO50_RS24380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24380;old_locus_tag=BVI1335_600027 NZ_CAJZAO010000339.1 Protein Homology CDS 23255 24112 . + 0 ID=cds-WP_014723663.1;Parent=gene-LDO50_RS24380;Dbxref=GenBank:WP_014723663.1;Name=WP_014723663.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759036.1;locus_tag=LDO50_RS24380;product=NUDIX hydrolase;protein_id=WP_014723663.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 24216 25100 . + . ID=gene-LDO50_RS24385;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=LDO50_RS24385;old_locus_tag=BVI1335_600028 NZ_CAJZAO010000339.1 Protein Homology CDS 24216 25100 . + 0 ID=cds-WP_011886046.1;Parent=gene-LDO50_RS24385;Dbxref=GenBank:WP_011886046.1;Name=WP_011886046.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522850.1;locus_tag=LDO50_RS24385;product=formyltetrahydrofolate deformylase;protein_id=WP_011886046.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 25202 26284 . - . ID=gene-LDO50_RS24390;Name=LDO50_RS24390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24390;old_locus_tag=BVI1335_600030 NZ_CAJZAO010000339.1 Protein Homology CDS 25202 26284 . - 0 ID=cds-WP_014723662.1;Parent=gene-LDO50_RS24390;Dbxref=GenBank:WP_014723662.1;Name=WP_014723662.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917426.1;locus_tag=LDO50_RS24390;product=AI-2E family transporter;protein_id=WP_014723662.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 26543 29428 . - . ID=gene-LDO50_RS24395;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=LDO50_RS24395;old_locus_tag=BVI1335_600031 NZ_CAJZAO010000339.1 Protein Homology CDS 26543 29428 . - 0 ID=cds-WP_011886044.1;Parent=gene-LDO50_RS24395;Dbxref=GenBank:WP_011886044.1;Name=WP_011886044.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090680.1;locus_tag=LDO50_RS24395;product=excinuclease ABC subunit UvrA;protein_id=WP_011886044.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 29691 30878 . + . ID=gene-LDO50_RS24400;Name=LDO50_RS24400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24400;old_locus_tag=BVI1335_600032 NZ_CAJZAO010000339.1 Protein Homology CDS 29691 30878 . + 0 ID=cds-WP_014723660.1;Parent=gene-LDO50_RS24400;Dbxref=GenBank:WP_014723660.1;Name=WP_014723660.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886043.1;locus_tag=LDO50_RS24400;product=MFS transporter;protein_id=WP_014723660.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 30982 31533 . + . ID=gene-LDO50_RS24405;Name=LDO50_RS24405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24405;old_locus_tag=BVI1335_600033 NZ_CAJZAO010000339.1 Protein Homology CDS 30982 31533 . + 0 ID=cds-WP_059461221.1;Parent=gene-LDO50_RS24405;Dbxref=GenBank:WP_059461221.1;Name=WP_059461221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353211.1;locus_tag=LDO50_RS24405;product=single-stranded DNA-binding protein;protein_id=WP_059461221.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 31759 32523 . + . ID=gene-LDO50_RS24410;Name=LDO50_RS24410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24410;old_locus_tag=BVI1335_600034 NZ_CAJZAO010000339.1 Protein Homology CDS 31759 32523 . + 0 ID=cds-WP_011886041.1;Parent=gene-LDO50_RS24410;Dbxref=GenBank:WP_011886041.1;Name=WP_011886041.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334232.1;locus_tag=LDO50_RS24410;product=ParA family protein;protein_id=WP_011886041.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 32624 32821 . + . ID=gene-LDO50_RS24415;Name=LDO50_RS24415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24415 NZ_CAJZAO010000339.1 GeneMarkS-2+ CDS 32624 32821 . + 0 ID=cds-WP_131929064.1;Parent=gene-LDO50_RS24415;Dbxref=GenBank:WP_131929064.1;Name=WP_131929064.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS24415;product=hypothetical protein;protein_id=WP_131929064.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 32974 33555 . + . ID=gene-LDO50_RS24420;Name=phaP;gbkey=Gene;gene=phaP;gene_biotype=protein_coding;locus_tag=LDO50_RS24420;old_locus_tag=BVI1335_600036 NZ_CAJZAO010000339.1 Protein Homology CDS 32974 33555 . + 0 ID=cds-WP_034192568.1;Parent=gene-LDO50_RS24420;Dbxref=GenBank:WP_034192568.1;Name=WP_034192568.1;Note=Members of this family are phasins (small proteins associated with inclusions such as PHA granules). Note that several different families of phasins have been named PhaP despite very little sequence similarity to each other.;gbkey=CDS;gene=phaP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694404.1;locus_tag=LDO50_RS24420;product=TIGR01841 family phasin;protein_id=WP_034192568.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 33895 35076 . + . ID=gene-LDO50_RS24425;Name=LDO50_RS24425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24425;old_locus_tag=BVI1335_600037 NZ_CAJZAO010000339.1 Protein Homology CDS 33895 35076 . + 0 ID=cds-WP_041493836.1;Parent=gene-LDO50_RS24425;Dbxref=GenBank:WP_041493836.1;Name=WP_041493836.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884947.1;locus_tag=LDO50_RS24425;product=acetyl-CoA C-acetyltransferase;protein_id=WP_041493836.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 35197 35937 . + . ID=gene-LDO50_RS24430;Name=LDO50_RS24430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24430;old_locus_tag=BVI1335_600038 NZ_CAJZAO010000339.1 Protein Homology CDS 35197 35937 . + 0 ID=cds-WP_011884946.1;Parent=gene-LDO50_RS24430;Dbxref=GenBank:WP_011884946.1;Name=WP_011884946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007586437.1;locus_tag=LDO50_RS24430;product=3-ketoacyl-ACP reductase;protein_id=WP_011884946.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 36056 36622 . + . ID=gene-LDO50_RS24435;Name=phaR;gbkey=Gene;gene=phaR;gene_biotype=protein_coding;locus_tag=LDO50_RS24435;old_locus_tag=BVI1335_600039 NZ_CAJZAO010000339.1 Protein Homology CDS 36056 36622 . + 0 ID=cds-WP_011884945.1;Parent=gene-LDO50_RS24435;Dbxref=GenBank:WP_011884945.1;Name=WP_011884945.1;Ontology_term=GO:0006355;gbkey=CDS;gene=phaR;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192676.1;locus_tag=LDO50_RS24435;product=polyhydroxyalkanoate synthesis repressor PhaR;protein_id=WP_011884945.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 36705 36959 . - . ID=gene-LDO50_RS24440;Name=LDO50_RS24440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24440;old_locus_tag=BVI1335_600040 NZ_CAJZAO010000339.1 Protein Homology CDS 36705 36959 . - 0 ID=cds-WP_034193171.1;Parent=gene-LDO50_RS24440;Dbxref=GenBank:WP_034193171.1;Name=WP_034193171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884944.1;locus_tag=LDO50_RS24440;product=hypothetical protein;protein_id=WP_034193171.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 37186 38547 . + . ID=gene-LDO50_RS24445;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=LDO50_RS24445;old_locus_tag=BVI1335_600041 NZ_CAJZAO010000339.1 Protein Homology CDS 37186 38547 . + 0 ID=cds-WP_011884943.1;Parent=gene-LDO50_RS24445;Dbxref=GenBank:WP_011884943.1;Name=WP_011884943.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896933.1;locus_tag=LDO50_RS24445;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_011884943.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 38551 39477 . + . ID=gene-LDO50_RS24450;Name=LDO50_RS24450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24450;old_locus_tag=BVI1335_600042 NZ_CAJZAO010000339.1 Protein Homology CDS 38551 39477 . + 0 ID=cds-WP_011884942.1;Parent=gene-LDO50_RS24450;Dbxref=GenBank:WP_011884942.1;Name=WP_011884942.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485268.1;locus_tag=LDO50_RS24450;product=sugar kinase;protein_id=WP_011884942.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 39566 40081 . + . ID=gene-LDO50_RS24455;Name=LDO50_RS24455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24455;old_locus_tag=BVI1335_600043 NZ_CAJZAO010000339.1 Protein Homology CDS 39566 40081 . + 0 ID=cds-WP_232356153.1;Parent=gene-LDO50_RS24455;Dbxref=GenBank:WP_232356153.1;Name=WP_232356153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764242.1;locus_tag=LDO50_RS24455;product=hypothetical protein;protein_id=WP_232356153.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 40191 41375 . + . ID=gene-LDO50_RS24460;Name=LDO50_RS24460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24460;old_locus_tag=BVI1335_600044 NZ_CAJZAO010000339.1 Protein Homology CDS 40191 41375 . + 0 ID=cds-WP_034193170.1;Parent=gene-LDO50_RS24460;Dbxref=GenBank:WP_034193170.1;Name=WP_034193170.1;Ontology_term=GO:0019346,GO:0047804;gbkey=CDS;go_function=cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884940.1;locus_tag=LDO50_RS24460;product=cystathionine beta-lyase;protein_id=WP_034193170.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 41460 42305 . - . ID=gene-LDO50_RS24465;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=LDO50_RS24465;old_locus_tag=BVI1335_600045 NZ_CAJZAO010000339.1 Protein Homology CDS 41460 42305 . - 0 ID=cds-WP_014723085.1;Parent=gene-LDO50_RS24465;Dbxref=GenBank:WP_014723085.1;Name=WP_014723085.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006475922.1;locus_tag=LDO50_RS24465;product=phosphoserine phosphatase SerB;protein_id=WP_014723085.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 42442 43383 . - . ID=gene-LDO50_RS24470;Name=LDO50_RS24470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24470;old_locus_tag=BVI1335_600046 NZ_CAJZAO010000339.1 Protein Homology CDS 42442 43383 . - 0 ID=cds-WP_011884938.1;Parent=gene-LDO50_RS24470;Dbxref=GenBank:WP_011884938.1;Name=WP_011884938.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213274.1;locus_tag=LDO50_RS24470;product=LysR family transcriptional regulator;protein_id=WP_011884938.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 43507 44523 . + . ID=gene-LDO50_RS24475;Name=LDO50_RS24475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24475;old_locus_tag=BVI1335_600047 NZ_CAJZAO010000339.1 Protein Homology CDS 43507 44523 . + 0 ID=cds-WP_034193202.1;Parent=gene-LDO50_RS24475;Dbxref=GenBank:WP_034193202.1;Name=WP_034193202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497183.1;locus_tag=LDO50_RS24475;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_034193202.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 44691 45242 . + . ID=gene-LDO50_RS24480;Name=LDO50_RS24480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24480;old_locus_tag=BVI1335_600048 NZ_CAJZAO010000339.1 Protein Homology CDS 44691 45242 . + 0 ID=cds-WP_014723082.1;Parent=gene-LDO50_RS24480;Dbxref=GenBank:WP_014723082.1;Name=WP_014723082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363968.1;locus_tag=LDO50_RS24480;product=DUF6013 family protein;protein_id=WP_014723082.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 45426 46229 . - . ID=gene-LDO50_RS24485;Name=LDO50_RS24485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24485;old_locus_tag=BVI1335_600049 NZ_CAJZAO010000339.1 Protein Homology CDS 45426 46229 . - 0 ID=cds-WP_011884935.1;Parent=gene-LDO50_RS24485;Dbxref=GenBank:WP_011884935.1;Name=WP_011884935.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213278.1;locus_tag=LDO50_RS24485;product=ABC transporter permease;protein_id=WP_011884935.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 46226 46927 . - . ID=gene-LDO50_RS24490;Name=LDO50_RS24490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24490;old_locus_tag=BVI1335_600050 NZ_CAJZAO010000339.1 Protein Homology CDS 46226 46927 . - 0 ID=cds-WP_011884934.1;Parent=gene-LDO50_RS24490;Dbxref=GenBank:WP_011884934.1;Name=WP_011884934.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328605.1;locus_tag=LDO50_RS24490;product=ABC transporter ATP-binding protein;protein_id=WP_011884934.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 47080 49350 . + . ID=gene-LDO50_RS24495;Name=LDO50_RS24495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24495;old_locus_tag=BVI1335_600051 NZ_CAJZAO010000339.1 Protein Homology CDS 47080 49350 . + 0 ID=cds-WP_060092429.1;Parent=gene-LDO50_RS24495;Dbxref=GenBank:WP_060092429.1;Name=WP_060092429.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656991.1;locus_tag=LDO50_RS24495;product=AsmA family protein;protein_id=WP_060092429.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 49479 51071 . + . ID=gene-LDO50_RS24500;Name=LDO50_RS24500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24500;old_locus_tag=BVI1335_600052 NZ_CAJZAO010000339.1 Protein Homology CDS 49479 51071 . + 0 ID=cds-WP_014723081.1;Parent=gene-LDO50_RS24500;Dbxref=GenBank:WP_014723081.1;Name=WP_014723081.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485248.1;locus_tag=LDO50_RS24500;product=ABC-F family ATPase;protein_id=WP_014723081.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 51961 61440 . + . ID=gene-LDO50_RS24505;Name=LDO50_RS24505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24505;old_locus_tag=BVI1335_600053 NZ_CAJZAO010000339.1 Protein Homology CDS 51961 61440 . + 0 ID=cds-WP_224020214.1;Parent=gene-LDO50_RS24505;Dbxref=GenBank:WP_224020214.1;Name=WP_224020214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759145.1;locus_tag=LDO50_RS24505;product=hemagglutinin repeat-containing protein;protein_id=WP_224020214.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 61437 61790 . + . ID=gene-LDO50_RS24510;Name=LDO50_RS24510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24510;old_locus_tag=BVI1335_600054 NZ_CAJZAO010000339.1 Protein Homology CDS 61437 61790 . + 0 ID=cds-WP_059461770.1;Parent=gene-LDO50_RS24510;Dbxref=GenBank:WP_059461770.1;Name=WP_059461770.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026924.6;locus_tag=LDO50_RS24510;product=Imm8 family immunity protein;protein_id=WP_059461770.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 61820 62116 . + . ID=gene-LDO50_RS24515;Name=LDO50_RS24515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24515 NZ_CAJZAO010000339.1 GeneMarkS-2+ CDS 61820 62116 . + 0 ID=cds-WP_155624622.1;Parent=gene-LDO50_RS24515;Dbxref=GenBank:WP_155624622.1;Name=WP_155624622.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS24515;product=hypothetical protein;protein_id=WP_155624622.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 62133 63572 . + . ID=gene-LDO50_RS24520;Name=LDO50_RS24520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24520;old_locus_tag=BVI1335_600056 NZ_CAJZAO010000339.1 Protein Homology CDS 62133 63572 . + 0 ID=cds-WP_059461769.1;Parent=gene-LDO50_RS24520;Dbxref=GenBank:WP_059461769.1;Name=WP_059461769.1;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406101.1;locus_tag=LDO50_RS24520;product=UbiA family prenyltransferase;protein_id=WP_059461769.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 63587 64777 . + . ID=gene-LDO50_RS24525;Name=LDO50_RS24525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24525;old_locus_tag=BVI1335_600058 NZ_CAJZAO010000339.1 Protein Homology CDS 63587 64777 . + 0 ID=cds-WP_224020215.1;Parent=gene-LDO50_RS24525;Dbxref=GenBank:WP_224020215.1;Name=WP_224020215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758112.1;locus_tag=LDO50_RS24525;product=hypothetical protein;protein_id=WP_224020215.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 64774 65112 . + . ID=gene-LDO50_RS24530;Name=LDO50_RS24530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24530;old_locus_tag=BVI1335_600059 NZ_CAJZAO010000339.1 Protein Homology CDS 64774 65112 . + 0 ID=cds-WP_045579082.1;Parent=gene-LDO50_RS24530;Dbxref=GenBank:WP_045579082.1;Name=WP_045579082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396454.1;locus_tag=LDO50_RS24530;product=hypothetical protein;protein_id=WP_045579082.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 65196 66863 . + . ID=gene-LDO50_RS24535;Name=LDO50_RS24535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24535;old_locus_tag=BVI1335_600060 NZ_CAJZAO010000339.1 Protein Homology CDS 65196 66863 . + 0 ID=cds-WP_224020218.1;Parent=gene-LDO50_RS24535;Dbxref=GenBank:WP_224020218.1;Name=WP_224020218.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689922.1;locus_tag=LDO50_RS24535;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_224020218.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 66888 67109 . + . ID=gene-LDO50_RS24540;Name=LDO50_RS24540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24540;old_locus_tag=BVI1335_600061 NZ_CAJZAO010000339.1 GeneMarkS-2+ CDS 66888 67109 . + 0 ID=cds-WP_034193163.1;Parent=gene-LDO50_RS24540;Dbxref=GenBank:WP_034193163.1;Name=WP_034193163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS24540;product=hypothetical protein;protein_id=WP_034193163.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 67214 67789 . + . ID=gene-LDO50_RS24545;Name=LDO50_RS24545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24545 NZ_CAJZAO010000339.1 Protein Homology CDS 67214 67789 . + 0 ID=cds-WP_224020216.1;Parent=gene-LDO50_RS24545;Dbxref=GenBank:WP_224020216.1;Name=WP_224020216.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017182.6;locus_tag=LDO50_RS24545;product=DUF746 domain-containing protein;protein_id=WP_224020216.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq pseudogene 67857 68821 . + . ID=gene-LDO50_RS24550;Name=LDO50_RS24550;end_range=68821,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS24550;partial=true;pseudo=true NZ_CAJZAO010000339.1 Protein Homology CDS 67857 68821 . + 0 ID=cds-LDO50_RS24550;Parent=gene-LDO50_RS24550;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=68821,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611314.1;locus_tag=LDO50_RS24550;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 69035 70084 . + . ID=gene-LDO50_RS24555;Name=LDO50_RS24555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24555;old_locus_tag=BVI1335_600065 NZ_CAJZAO010000339.1 Protein Homology CDS 69035 70084 . + 0 ID=cds-WP_041493840.1;Parent=gene-LDO50_RS24555;Dbxref=GenBank:WP_041493840.1;Name=WP_041493840.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699837.1;locus_tag=LDO50_RS24555;product=IS110 family transposase;protein_id=WP_041493840.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq pseudogene 70100 70297 . + . ID=gene-LDO50_RS24560;Name=LDO50_RS24560;end_range=70297,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS24560;old_locus_tag=BVI1335_600066;partial=true;pseudo=true;start_range=.,70100 NZ_CAJZAO010000339.1 Protein Homology CDS 70100 70297 . + 0 ID=cds-LDO50_RS24560;Parent=gene-LDO50_RS24560;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=70297,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611314.1;locus_tag=LDO50_RS24560;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,70100;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 70409 71455 . - . ID=gene-LDO50_RS24565;Name=LDO50_RS24565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24565;old_locus_tag=BVI1335_600067 NZ_CAJZAO010000339.1 Protein Homology CDS 70409 71455 . - 0 ID=cds-WP_034193160.1;Parent=gene-LDO50_RS24565;Dbxref=GenBank:WP_034193160.1;Name=WP_034193160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753482.1;locus_tag=LDO50_RS24565;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_034193160.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 71589 72053 . + . ID=gene-LDO50_RS24570;Name=LDO50_RS24570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24570;old_locus_tag=BVI1335_600068 NZ_CAJZAO010000339.1 Protein Homology CDS 71589 72053 . + 0 ID=cds-WP_011884930.1;Parent=gene-LDO50_RS24570;Dbxref=GenBank:WP_011884930.1;Name=WP_011884930.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753484.1;locus_tag=LDO50_RS24570;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011884930.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 72085 72450 . - . ID=gene-LDO50_RS24575;Name=LDO50_RS24575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24575;old_locus_tag=BVI1335_600069 NZ_CAJZAO010000339.1 Protein Homology CDS 72085 72450 . - 0 ID=cds-WP_011884929.1;Parent=gene-LDO50_RS24575;Dbxref=GenBank:WP_011884929.1;Name=WP_011884929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399981.1;locus_tag=LDO50_RS24575;product=hypothetical protein;protein_id=WP_011884929.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 72710 74146 . + . ID=gene-LDO50_RS24580;Name=LDO50_RS24580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24580;old_locus_tag=BVI1335_600070 NZ_CAJZAO010000339.1 Protein Homology CDS 72710 74146 . + 0 ID=cds-WP_014723079.1;Parent=gene-LDO50_RS24580;Dbxref=GenBank:WP_014723079.1;Name=WP_014723079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760071.1;locus_tag=LDO50_RS24580;product=aldehyde dehydrogenase family protein;protein_id=WP_014723079.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 74270 75460 . + . ID=gene-LDO50_RS24585;Name=LDO50_RS24585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24585;old_locus_tag=BVI1335_600071 NZ_CAJZAO010000339.1 Protein Homology CDS 74270 75460 . + 0 ID=cds-WP_011884927.1;Parent=gene-LDO50_RS24585;Dbxref=GenBank:WP_011884927.1;Name=WP_011884927.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328583.1;locus_tag=LDO50_RS24585;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_011884927.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 75526 76167 . + . ID=gene-LDO50_RS24590;Name=LDO50_RS24590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24590;old_locus_tag=BVI1335_600072 NZ_CAJZAO010000339.1 Protein Homology CDS 75526 76167 . + 0 ID=cds-WP_011884926.1;Parent=gene-LDO50_RS24590;Dbxref=GenBank:WP_011884926.1;Name=WP_011884926.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328582.1;locus_tag=LDO50_RS24590;product=OmpW/AlkL family protein;protein_id=WP_011884926.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 76388 76591 . - . ID=gene-LDO50_RS24595;Name=LDO50_RS24595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24595;old_locus_tag=BVI1335_600073 NZ_CAJZAO010000339.1 Protein Homology CDS 76388 76591 . - 0 ID=cds-WP_011884925.1;Parent=gene-LDO50_RS24595;Dbxref=GenBank:WP_011884925.1;Name=WP_011884925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009973325.1;locus_tag=LDO50_RS24595;product=DUF1289 domain-containing protein;protein_id=WP_011884925.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 77100 78194 . + . ID=gene-LDO50_RS24600;Name=LDO50_RS24600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24600;old_locus_tag=BVI1335_600075 NZ_CAJZAO010000339.1 Protein Homology CDS 77100 78194 . + 0 ID=cds-WP_011884924.1;Parent=gene-LDO50_RS24600;Dbxref=GenBank:WP_011884924.1;Name=WP_011884924.1;Ontology_term=GO:0015846,GO:0019808,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004266745.1;locus_tag=LDO50_RS24600;product=polyamine ABC transporter substrate-binding protein;protein_id=WP_011884924.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 78281 79441 . + . ID=gene-LDO50_RS24605;Name=LDO50_RS24605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24605;old_locus_tag=BVI1335_600076 NZ_CAJZAO010000339.1 Protein Homology CDS 78281 79441 . + 0 ID=cds-WP_011884923.1;Parent=gene-LDO50_RS24605;Dbxref=GenBank:WP_011884923.1;Name=WP_011884923.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115150.1;locus_tag=LDO50_RS24605;product=ABC transporter ATP-binding protein;protein_id=WP_011884923.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 79438 80367 . + . ID=gene-LDO50_RS24610;Name=LDO50_RS24610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24610;old_locus_tag=BVI1335_600077 NZ_CAJZAO010000339.1 Protein Homology CDS 79438 80367 . + 0 ID=cds-WP_011884922.1;Parent=gene-LDO50_RS24610;Dbxref=GenBank:WP_011884922.1;Name=WP_011884922.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884922.1;locus_tag=LDO50_RS24610;product=ABC transporter permease subunit;protein_id=WP_011884922.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 80364 81185 . + . ID=gene-LDO50_RS24615;Name=LDO50_RS24615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24615;old_locus_tag=BVI1335_600078 NZ_CAJZAO010000339.1 Protein Homology CDS 80364 81185 . + 0 ID=cds-WP_011884921.1;Parent=gene-LDO50_RS24615;Dbxref=GenBank:WP_011884921.1;Name=WP_011884921.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884921.1;locus_tag=LDO50_RS24615;product=ABC transporter permease subunit;protein_id=WP_011884921.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 81293 82099 . - . ID=gene-LDO50_RS24620;Name=LDO50_RS24620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24620;old_locus_tag=BVI1335_600079 NZ_CAJZAO010000339.1 Protein Homology CDS 81293 82099 . - 0 ID=cds-WP_011884920.1;Parent=gene-LDO50_RS24620;Dbxref=GenBank:WP_011884920.1;Name=WP_011884920.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006475949.1;locus_tag=LDO50_RS24620;product=sulfite exporter TauE/SafE family protein;protein_id=WP_011884920.1;transl_table=11 NZ_CAJZAO010000339.1 RefSeq gene 82118 83385 . - . ID=gene-LDO50_RS24625;Name=LDO50_RS24625;end_range=83385,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24625;old_locus_tag=BVI1335_600080;partial=true NZ_CAJZAO010000339.1 Protein Homology CDS 82118 83385 . - 2 ID=cds-WP_224020217.1;Parent=gene-LDO50_RS24625;Dbxref=GenBank:WP_224020217.1;Name=WP_224020217.1;Ontology_term=GO:0000166,GO:0016491;end_range=83385,.;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884919.1;locus_tag=LDO50_RS24625;partial=true;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_224020217.1;transl_table=11 ##sequence-region NZ_CAJZAO010000340.1 1 28250 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000340.1 RefSeq region 1 28250 . + . ID=NZ_CAJZAO010000340.1:1..28250;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_61 NZ_CAJZAO010000340.1 RefSeq pseudogene 1 393 . - . ID=gene-LDO50_RS24630;Name=LDO50_RS24630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS24630;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000340.1 Protein Homology CDS 1 393 . - 0 ID=cds-LDO50_RS24630;Parent=gene-LDO50_RS24630;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886276.1;locus_tag=LDO50_RS24630;partial=true;product=allophanate hydrolase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 390 1046 . - . ID=gene-LDO50_RS24635;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=LDO50_RS24635;old_locus_tag=BVI1335_610002 NZ_CAJZAO010000340.1 Protein Homology CDS 390 1046 . - 0 ID=cds-WP_014723822.1;Parent=gene-LDO50_RS24635;Dbxref=GenBank:WP_014723822.1;Name=WP_014723822.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886275.1;locus_tag=LDO50_RS24635;product=5-oxoprolinase subunit PxpB;protein_id=WP_014723822.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 1195 1707 . + . ID=gene-LDO50_RS24640;Name=LDO50_RS24640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24640;old_locus_tag=BVI1335_610003 NZ_CAJZAO010000340.1 Protein Homology CDS 1195 1707 . + 0 ID=cds-WP_014723821.1;Parent=gene-LDO50_RS24640;Dbxref=GenBank:WP_014723821.1;Name=WP_014723821.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024208.1;locus_tag=LDO50_RS24640;product=winged helix DNA-binding protein;protein_id=WP_014723821.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 1773 2381 . - . ID=gene-LDO50_RS24645;Name=LDO50_RS24645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24645;old_locus_tag=BVI1335_610004 NZ_CAJZAO010000340.1 Protein Homology CDS 1773 2381 . - 0 ID=cds-WP_059695709.1;Parent=gene-LDO50_RS24645;Dbxref=GenBank:WP_059695709.1;Name=WP_059695709.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353482.1;locus_tag=LDO50_RS24645;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_059695709.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 2390 4342 . + . ID=gene-LDO50_RS24650;Name=LDO50_RS24650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24650;old_locus_tag=BVI1335_610005 NZ_CAJZAO010000340.1 Protein Homology CDS 2390 4342 . + 0 ID=cds-WP_041493912.1;Parent=gene-LDO50_RS24650;Dbxref=GenBank:WP_041493912.1;Name=WP_041493912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602139.1;locus_tag=LDO50_RS24650;product=lytic transglycosylase domain-containing protein;protein_id=WP_041493912.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 4504 5463 . + . ID=gene-LDO50_RS24655;Name=LDO50_RS24655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24655;old_locus_tag=BVI1335_610006 NZ_CAJZAO010000340.1 Protein Homology CDS 4504 5463 . + 0 ID=cds-WP_034192488.1;Parent=gene-LDO50_RS24655;Dbxref=GenBank:WP_034192488.1;Name=WP_034192488.1;Ontology_term=GO:0010257,GO:0022904,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=NADH dehydrogenase complex assembly|0010257||IEA,respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197236.1;locus_tag=LDO50_RS24655;product=complex I NDUFA9 subunit family protein;protein_id=WP_034192488.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 5519 6166 . + . ID=gene-LDO50_RS24660;Name=LDO50_RS24660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24660;old_locus_tag=BVI1335_610007 NZ_CAJZAO010000340.1 Protein Homology CDS 5519 6166 . + 0 ID=cds-WP_011886270.1;Parent=gene-LDO50_RS24660;Dbxref=GenBank:WP_011886270.1;Name=WP_011886270.1;Ontology_term=GO:0006749,GO:0004364;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895787.1;locus_tag=LDO50_RS24660;product=glutathione S-transferase family protein;protein_id=WP_011886270.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 6163 7404 . + . ID=gene-LDO50_RS24665;Name=LDO50_RS24665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24665;old_locus_tag=BVI1335_610008 NZ_CAJZAO010000340.1 Protein Homology CDS 6163 7404 . + 0 ID=cds-WP_176000432.1;Parent=gene-LDO50_RS24665;Dbxref=GenBank:WP_176000432.1;Name=WP_176000432.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658147.1;locus_tag=LDO50_RS24665;product=multifunctional CCA addition/repair protein;protein_id=WP_176000432.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 7723 8523 . - . ID=gene-LDO50_RS24670;Name=LDO50_RS24670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24670;old_locus_tag=BVI1335_610009 NZ_CAJZAO010000340.1 Protein Homology CDS 7723 8523 . - 0 ID=cds-WP_209148943.1;Parent=gene-LDO50_RS24670;Dbxref=GenBank:WP_209148943.1;Name=WP_209148943.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723817.1;locus_tag=LDO50_RS24670;product=helix-turn-helix domain-containing protein;protein_id=WP_209148943.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 8885 10807 . + . ID=gene-LDO50_RS24675;Name=LDO50_RS24675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24675;old_locus_tag=BVI1335_610011 NZ_CAJZAO010000340.1 Protein Homology CDS 8885 10807 . + 0 ID=cds-WP_212197319.1;Parent=gene-LDO50_RS24675;Dbxref=GenBank:WP_212197319.1;Name=WP_212197319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483179.1;locus_tag=LDO50_RS24675;product=M24 family metallopeptidase;protein_id=WP_212197319.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 10875 11315 . - . ID=gene-LDO50_RS24680;Name=LDO50_RS24680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24680;old_locus_tag=BVI1335_610012 NZ_CAJZAO010000340.1 Protein Homology CDS 10875 11315 . - 0 ID=cds-WP_011886266.1;Parent=gene-LDO50_RS24680;Dbxref=GenBank:WP_011886266.1;Name=WP_011886266.1;Ontology_term=GO:0044780;gbkey=CDS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402753.1;locus_tag=LDO50_RS24680;product=flagella synthesis protein FlgN;protein_id=WP_011886266.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 11401 11733 . - . ID=gene-LDO50_RS24685;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=LDO50_RS24685;old_locus_tag=BVI1335_610013 NZ_CAJZAO010000340.1 Protein Homology CDS 11401 11733 . - 0 ID=cds-WP_011886265.1;Parent=gene-LDO50_RS24685;Dbxref=GenBank:WP_011886265.1;Name=WP_011886265.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408032.1;locus_tag=LDO50_RS24685;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_011886265.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 11852 13132 . - . ID=gene-LDO50_RS24690;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=LDO50_RS24690;old_locus_tag=BVI1335_610014 NZ_CAJZAO010000340.1 Protein Homology CDS 11852 13132 . - 0 ID=cds-WP_224020219.1;Parent=gene-LDO50_RS24690;Dbxref=GenBank:WP_224020219.1;Name=WP_224020219.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214311.1;locus_tag=LDO50_RS24690;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_224020219.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 13338 13826 . + . ID=gene-LDO50_RS24695;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=LDO50_RS24695;old_locus_tag=BVI1335_610015 NZ_CAJZAO010000340.1 Protein Homology CDS 13338 13826 . + 0 ID=cds-WP_224020220.1;Parent=gene-LDO50_RS24695;Dbxref=GenBank:WP_224020220.1;Name=WP_224020220.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353471.1;locus_tag=LDO50_RS24695;product=flagellar basal body rod protein FlgB;protein_id=WP_224020220.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 13867 14292 . + . ID=gene-LDO50_RS24700;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=LDO50_RS24700;old_locus_tag=BVI1335_610016 NZ_CAJZAO010000340.1 Protein Homology CDS 13867 14292 . + 0 ID=cds-WP_011886262.1;Parent=gene-LDO50_RS24700;Dbxref=GenBank:WP_011886262.1;Name=WP_011886262.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402757.1;locus_tag=LDO50_RS24700;product=flagellar basal body rod protein FlgC;protein_id=WP_011886262.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 14349 15095 . + . ID=gene-LDO50_RS24705;Name=LDO50_RS24705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24705;old_locus_tag=BVI1335_610017 NZ_CAJZAO010000340.1 Protein Homology CDS 14349 15095 . + 0 ID=cds-WP_011886261.1;Parent=gene-LDO50_RS24705;Dbxref=GenBank:WP_011886261.1;Name=WP_011886261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895796.1;locus_tag=LDO50_RS24705;product=flagellar hook assembly protein FlgD;protein_id=WP_011886261.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 15124 16365 . + . ID=gene-LDO50_RS24710;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=LDO50_RS24710;old_locus_tag=BVI1335_610018 NZ_CAJZAO010000340.1 Protein Homology CDS 15124 16365 . + 0 ID=cds-WP_014723814.1;Parent=gene-LDO50_RS24710;Dbxref=GenBank:WP_014723814.1;Name=WP_014723814.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763175.1;locus_tag=LDO50_RS24710;product=flagellar hook protein FlgE;protein_id=WP_014723814.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 16385 17143 . + . ID=gene-LDO50_RS24715;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=LDO50_RS24715;old_locus_tag=BVI1335_610019 NZ_CAJZAO010000340.1 Protein Homology CDS 16385 17143 . + 0 ID=cds-WP_011886259.1;Parent=gene-LDO50_RS24715;Dbxref=GenBank:WP_011886259.1;Name=WP_011886259.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgF;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010112969.1;locus_tag=LDO50_RS24715;product=flagellar basal-body rod protein FlgF;protein_id=WP_011886259.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 17179 17967 . + . ID=gene-LDO50_RS24720;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=LDO50_RS24720;old_locus_tag=BVI1335_610020 NZ_CAJZAO010000340.1 Protein Homology CDS 17179 17967 . + 0 ID=cds-WP_011886258.1;Parent=gene-LDO50_RS24720;Dbxref=GenBank:WP_011886258.1;Name=WP_011886258.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895799.1;locus_tag=LDO50_RS24720;product=flagellar basal-body rod protein FlgG;protein_id=WP_011886258.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 17988 18677 . + . ID=gene-LDO50_RS24725;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=LDO50_RS24725;old_locus_tag=BVI1335_610021 NZ_CAJZAO010000340.1 Protein Homology CDS 17988 18677 . + 0 ID=cds-WP_011886257.1;Parent=gene-LDO50_RS24725;Dbxref=GenBank:WP_011886257.1;Name=WP_011886257.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495504.1;locus_tag=LDO50_RS24725;product=flagellar basal body L-ring protein FlgH;protein_id=WP_011886257.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 18683 19855 . + . ID=gene-LDO50_RS24730;Name=LDO50_RS24730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24730;old_locus_tag=BVI1335_610022 NZ_CAJZAO010000340.1 Protein Homology CDS 18683 19855 . + 0 ID=cds-WP_034192572.1;Parent=gene-LDO50_RS24730;Dbxref=GenBank:WP_034192572.1;Name=WP_034192572.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546412.1;locus_tag=LDO50_RS24730;product=flagellar basal body P-ring protein FlgI;protein_id=WP_034192572.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 19855 20844 . + . ID=gene-LDO50_RS24735;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=LDO50_RS24735;old_locus_tag=BVI1335_610023 NZ_CAJZAO010000340.1 Protein Homology CDS 19855 20844 . + 0 ID=cds-WP_014723811.1;Parent=gene-LDO50_RS24735;Dbxref=GenBank:WP_014723811.1;Name=WP_014723811.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402764.1;locus_tag=LDO50_RS24735;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_014723811.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 21076 21831 . + . ID=gene-LDO50_RS24740;Name=LDO50_RS24740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24740;old_locus_tag=BVI1335_610025 NZ_CAJZAO010000340.1 Protein Homology CDS 21076 21831 . + 0 ID=cds-WP_014723810.1;Parent=gene-LDO50_RS24740;Dbxref=GenBank:WP_014723810.1;Name=WP_014723810.1;Ontology_term=GO:0035438;gbkey=CDS;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024243.1;locus_tag=LDO50_RS24740;product=flagellar brake protein;protein_id=WP_014723810.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 21968 23935 . + . ID=gene-LDO50_RS24745;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=LDO50_RS24745;old_locus_tag=BVI1335_610026 NZ_CAJZAO010000340.1 Protein Homology CDS 21968 23935 . + 0 ID=cds-WP_011886253.1;Parent=gene-LDO50_RS24745;Dbxref=GenBank:WP_011886253.1;Name=WP_011886253.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601449.1;locus_tag=LDO50_RS24745;product=flagellar hook-associated protein FlgK;protein_id=WP_011886253.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 23958 25199 . + . ID=gene-LDO50_RS24750;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=LDO50_RS24750;old_locus_tag=BVI1335_610027 NZ_CAJZAO010000340.1 Protein Homology CDS 23958 25199 . + 0 ID=cds-WP_011886252.1;Parent=gene-LDO50_RS24750;Dbxref=GenBank:WP_011886252.1;Name=WP_011886252.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523038.1;locus_tag=LDO50_RS24750;product=flagellar hook-associated protein FlgL;protein_id=WP_011886252.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 25461 26768 . + . ID=gene-LDO50_RS24755;Name=LDO50_RS24755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24755;old_locus_tag=BVI1335_610028 NZ_CAJZAO010000340.1 Protein Homology CDS 25461 26768 . + 0 ID=cds-WP_011886251.1;Parent=gene-LDO50_RS24755;Dbxref=GenBank:WP_011886251.1;Name=WP_011886251.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004542894.1;locus_tag=LDO50_RS24755;product=solute carrier family 23 protein;protein_id=WP_011886251.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 26796 27680 . - . ID=gene-LDO50_RS24760;Name=LDO50_RS24760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24760;old_locus_tag=BVI1335_610030 NZ_CAJZAO010000340.1 Protein Homology CDS 26796 27680 . - 0 ID=cds-WP_046424069.1;Parent=gene-LDO50_RS24760;Dbxref=GenBank:WP_046424069.1;Name=WP_046424069.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658134.1;locus_tag=LDO50_RS24760;product=transcriptional regulator GcvA;protein_id=WP_046424069.1;transl_table=11 NZ_CAJZAO010000340.1 RefSeq gene 27777 28250 . + . ID=gene-LDO50_RS24765;Name=LDO50_RS24765;end_range=28250,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24765;partial=true NZ_CAJZAO010000340.1 Protein Homology CDS 27777 28250 . + 0 ID=cds-WP_224020221.1;Parent=gene-LDO50_RS24765;Dbxref=GenBank:WP_224020221.1;Name=WP_224020221.1;Ontology_term=GO:0015703,GO:0015109;end_range=28250,.;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364895.1;locus_tag=LDO50_RS24765;partial=true;product=chromate transporter;protein_id=WP_224020221.1;transl_table=11 ##sequence-region NZ_CAJZAO010000341.1 1 1614 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000341.1 RefSeq region 1 1614 . + . ID=NZ_CAJZAO010000341.1:1..1614;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_62 NZ_CAJZAO010000341.1 RefSeq gene 1 541 . - . ID=gene-LDO50_RS24770;Name=LDO50_RS24770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24770;partial=true;start_range=.,1 NZ_CAJZAO010000341.1 Protein Homology CDS 1 541 . - 0 ID=cds-WP_224020222.1;Parent=gene-LDO50_RS24770;Dbxref=GenBank:WP_224020222.1;Name=WP_224020222.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190343.1;locus_tag=LDO50_RS24770;partial=true;product=LysR family transcriptional regulator;protein_id=WP_224020222.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000341.1 RefSeq gene 652 1035 . + . ID=gene-LDO50_RS24775;Name=LDO50_RS24775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24775;old_locus_tag=BVI1335_620002 NZ_CAJZAO010000341.1 Protein Homology CDS 652 1035 . + 0 ID=cds-WP_011881563.1;Parent=gene-LDO50_RS24775;Dbxref=GenBank:WP_011881563.1;Name=WP_011881563.1;Ontology_term=GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479459.1;locus_tag=LDO50_RS24775;product=tautomerase family protein;protein_id=WP_011881563.1;transl_table=11 NZ_CAJZAO010000341.1 RefSeq pseudogene 1160 1614 . + . ID=gene-LDO50_RS24780;Name=LDO50_RS24780;end_range=1614,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS24780;partial=true;pseudo=true NZ_CAJZAO010000341.1 Protein Homology CDS 1160 1614 . + 0 ID=cds-LDO50_RS24780;Parent=gene-LDO50_RS24780;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1614,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486423.1;locus_tag=LDO50_RS24780;partial=true;product=CHAD domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000342.1 1 9484 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000342.1 RefSeq region 1 9484 . + . ID=NZ_CAJZAO010000342.1:1..9484;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_63 NZ_CAJZAO010000342.1 RefSeq gene 1 1088 . + . ID=gene-LDO50_RS24785;Name=LDO50_RS24785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24785;old_locus_tag=BVI1335_630001;partial=true;start_range=.,1 NZ_CAJZAO010000342.1 Protein Homology CDS 1 1088 . + 2 ID=cds-WP_224020223.1;Parent=gene-LDO50_RS24785;Dbxref=GenBank:WP_224020223.1;Name=WP_224020223.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723520.1;locus_tag=LDO50_RS24785;partial=true;product=class I adenylate-forming enzyme family protein;protein_id=WP_224020223.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000342.1 RefSeq gene 1104 2066 . - . ID=gene-LDO50_RS24790;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=LDO50_RS24790;old_locus_tag=BVI1335_630002 NZ_CAJZAO010000342.1 Protein Homology CDS 1104 2066 . - 0 ID=cds-WP_011885822.1;Parent=gene-LDO50_RS24790;Dbxref=GenBank:WP_011885822.1;Name=WP_011885822.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410310.1;locus_tag=LDO50_RS24790;product=site-specific tyrosine recombinase XerD;protein_id=WP_011885822.1;transl_table=11 NZ_CAJZAO010000342.1 RefSeq gene 2063 2533 . - . ID=gene-LDO50_RS24795;Name=LDO50_RS24795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24795;old_locus_tag=BVI1335_630003 NZ_CAJZAO010000342.1 Protein Homology CDS 2063 2533 . - 0 ID=cds-WP_069224412.1;Parent=gene-LDO50_RS24795;Dbxref=GenBank:WP_069224412.1;Name=WP_069224412.1;Ontology_term=GO:0006281,GO:0032259,GO:0003677,GO:0003908,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750949.1;locus_tag=LDO50_RS24795;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_069224412.1;transl_table=11 NZ_CAJZAO010000342.1 RefSeq gene 2592 3818 . - . ID=gene-LDO50_RS24800;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=LDO50_RS24800;old_locus_tag=BVI1335_630004 NZ_CAJZAO010000342.1 Protein Homology CDS 2592 3818 . - 0 ID=cds-WP_046427517.1;Parent=gene-LDO50_RS24800;Dbxref=GenBank:WP_046427517.1;Name=WP_046427517.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189719.1;locus_tag=LDO50_RS24800;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_046427517.1;transl_table=11 NZ_CAJZAO010000342.1 RefSeq gene 3836 4387 . + . ID=gene-LDO50_RS24805;Name=LDO50_RS24805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24805;old_locus_tag=BVI1335_630006 NZ_CAJZAO010000342.1 Protein Homology CDS 3836 4387 . + 0 ID=cds-WP_014723523.1;Parent=gene-LDO50_RS24805;Dbxref=GenBank:WP_014723523.1;Name=WP_014723523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492836.1;locus_tag=LDO50_RS24805;product=bifunctional tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE/phosphotransferase;protein_id=WP_014723523.1;transl_table=11 NZ_CAJZAO010000342.1 RefSeq gene 4369 5886 . + . ID=gene-LDO50_RS24810;Name=LDO50_RS24810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24810;old_locus_tag=BVI1335_630005 NZ_CAJZAO010000342.1 Protein Homology CDS 4369 5886 . + 0 ID=cds-WP_011885826.1;Parent=gene-LDO50_RS24810;Dbxref=GenBank:WP_011885826.1;Name=WP_011885826.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885826.1;locus_tag=LDO50_RS24810;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_011885826.1;transl_table=11 NZ_CAJZAO010000342.1 RefSeq gene 6002 6880 . - . ID=gene-LDO50_RS24815;Name=LDO50_RS24815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24815;old_locus_tag=BVI1335_630007 NZ_CAJZAO010000342.1 Protein Homology CDS 6002 6880 . - 0 ID=cds-WP_224020224.1;Parent=gene-LDO50_RS24815;Dbxref=GenBank:WP_224020224.1;Name=WP_224020224.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467684.1;locus_tag=LDO50_RS24815;product=EamA family transporter;protein_id=WP_224020224.1;transl_table=11 NZ_CAJZAO010000342.1 RefSeq pseudogene 6882 7151 . + . ID=gene-LDO50_RS32030;Name=LDO50_RS32030;end_range=7151,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS32030;partial=true;pseudo=true NZ_CAJZAO010000342.1 GeneMarkS-2+ CDS 6882 7151 . + 0 ID=cds-LDO50_RS32030;Parent=gene-LDO50_RS32030;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=7151,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS32030;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CAJZAO010000342.1 RefSeq gene 7319 8200 . + . ID=gene-LDO50_RS24820;Name=LDO50_RS24820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24820;old_locus_tag=BVI1335_630009 NZ_CAJZAO010000342.1 Protein Homology CDS 7319 8200 . + 0 ID=cds-WP_011885828.1;Parent=gene-LDO50_RS24820;Dbxref=GenBank:WP_011885828.1;Name=WP_011885828.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329104.1;locus_tag=LDO50_RS24820;product=pirin family protein;protein_id=WP_011885828.1;transl_table=11 NZ_CAJZAO010000342.1 RefSeq gene 8253 9098 . + . ID=gene-LDO50_RS24825;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=LDO50_RS24825;old_locus_tag=BVI1335_630010 NZ_CAJZAO010000342.1 Protein Homology CDS 8253 9098 . + 0 ID=cds-WP_034192645.1;Parent=gene-LDO50_RS24825;Dbxref=GenBank:WP_034192645.1;Name=WP_034192645.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398476.1;locus_tag=LDO50_RS24825;product=thioredoxin;protein_id=WP_034192645.1;transl_table=11 ##sequence-region NZ_CAJZAO010000343.1 1 15385 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000343.1 RefSeq region 1 15385 . + . ID=NZ_CAJZAO010000343.1:1..15385;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_64 NZ_CAJZAO010000343.1 RefSeq gene 10 1836 . - . ID=gene-LDO50_RS24830;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=LDO50_RS24830;old_locus_tag=BVI1335_640001 NZ_CAJZAO010000343.1 Protein Homology CDS 10 1836 . - 0 ID=cds-WP_011884600.1;Parent=gene-LDO50_RS24830;Dbxref=GenBank:WP_011884600.1;Name=WP_011884600.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013588059.1;locus_tag=LDO50_RS24830;product=translational GTPase TypA;protein_id=WP_011884600.1;transl_table=11 NZ_CAJZAO010000343.1 RefSeq gene 2172 2663 . + . ID=gene-LDO50_RS24835;Name=LDO50_RS24835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24835;old_locus_tag=BVI1335_640002 NZ_CAJZAO010000343.1 Protein Homology CDS 2172 2663 . + 0 ID=cds-WP_014722928.1;Parent=gene-LDO50_RS24835;Dbxref=GenBank:WP_014722928.1;Name=WP_014722928.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351804.1;locus_tag=LDO50_RS24835;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_014722928.1;transl_table=11 NZ_CAJZAO010000343.1 RefSeq gene 2751 4256 . + . ID=gene-LDO50_RS24840;Name=LDO50_RS24840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24840;old_locus_tag=BVI1335_640003 NZ_CAJZAO010000343.1 Protein Homology CDS 2751 4256 . + 0 ID=cds-WP_011884596.1;Parent=gene-LDO50_RS24840;Dbxref=GenBank:WP_011884596.1;Name=WP_011884596.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363745.1;locus_tag=LDO50_RS24840;product=efflux transporter outer membrane subunit;protein_id=WP_011884596.1;transl_table=11 NZ_CAJZAO010000343.1 RefSeq gene 4309 5532 . + . ID=gene-LDO50_RS24845;Name=LDO50_RS24845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24845;old_locus_tag=BVI1335_640004 NZ_CAJZAO010000343.1 Protein Homology CDS 4309 5532 . + 0 ID=cds-WP_011884593.1;Parent=gene-LDO50_RS24845;Dbxref=GenBank:WP_011884593.1;Name=WP_011884593.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011205096.1;locus_tag=LDO50_RS24845;product=HlyD family secretion protein;protein_id=WP_011884593.1;transl_table=11 NZ_CAJZAO010000343.1 RefSeq gene 5560 7119 . + . ID=gene-LDO50_RS24850;Name=LDO50_RS24850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24850;old_locus_tag=BVI1335_640005 NZ_CAJZAO010000343.1 Protein Homology CDS 5560 7119 . + 0 ID=cds-WP_059461915.1;Parent=gene-LDO50_RS24850;Dbxref=GenBank:WP_059461915.1;Name=WP_059461915.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492561.1;locus_tag=LDO50_RS24850;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_059461915.1;transl_table=11 NZ_CAJZAO010000343.1 RefSeq gene 7204 8136 . - . ID=gene-LDO50_RS24855;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=LDO50_RS24855;old_locus_tag=BVI1335_640006 NZ_CAJZAO010000343.1 Protein Homology CDS 7204 8136 . - 0 ID=cds-WP_034195581.1;Parent=gene-LDO50_RS24855;Dbxref=GenBank:WP_034195581.1;Name=WP_034195581.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363742.1;locus_tag=LDO50_RS24855;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_034195581.1;transl_table=11 NZ_CAJZAO010000343.1 RefSeq gene 8149 8547 . - . ID=gene-LDO50_RS24860;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=LDO50_RS24860;old_locus_tag=BVI1335_640007 NZ_CAJZAO010000343.1 Protein Homology CDS 8149 8547 . - 0 ID=cds-WP_011884590.1;Parent=gene-LDO50_RS24860;Dbxref=GenBank:WP_011884590.1;Name=WP_011884590.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495346.1;locus_tag=LDO50_RS24860;product=30S ribosome-binding factor RbfA;protein_id=WP_011884590.1;transl_table=11 NZ_CAJZAO010000343.1 RefSeq gene 8660 11584 . - . ID=gene-LDO50_RS24865;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=LDO50_RS24865;old_locus_tag=BVI1335_640008 NZ_CAJZAO010000343.1 Protein Homology CDS 8660 11584 . - 0 ID=cds-WP_014722923.1;Parent=gene-LDO50_RS24865;Dbxref=GenBank:WP_014722923.1;Name=WP_014722923.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402062.1;locus_tag=LDO50_RS24865;product=translation initiation factor IF-2;protein_id=WP_014722923.1;transl_table=11 NZ_CAJZAO010000343.1 RefSeq gene 11676 13151 . - . ID=gene-LDO50_RS24870;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=LDO50_RS24870;old_locus_tag=BVI1335_640009 NZ_CAJZAO010000343.1 Protein Homology CDS 11676 13151 . - 0 ID=cds-WP_011884586.1;Parent=gene-LDO50_RS24870;Dbxref=GenBank:WP_011884586.1;Name=WP_011884586.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012432652.1;locus_tag=LDO50_RS24870;product=transcription termination factor NusA;protein_id=WP_011884586.1;transl_table=11 NZ_CAJZAO010000343.1 RefSeq gene 13151 13609 . - . ID=gene-LDO50_RS24875;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=LDO50_RS24875;old_locus_tag=BVI1335_640010 NZ_CAJZAO010000343.1 Protein Homology CDS 13151 13609 . - 0 ID=cds-WP_011884583.1;Parent=gene-LDO50_RS24875;Dbxref=GenBank:WP_011884583.1;Name=WP_011884583.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402064.1;locus_tag=LDO50_RS24875;product=ribosome maturation factor RimP;protein_id=WP_011884583.1;transl_table=11 NZ_CAJZAO010000343.1 RefSeq gene 14035 15385 . - . ID=gene-LDO50_RS24880;Name=rluB;end_range=15385,.;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=LDO50_RS24880;old_locus_tag=BVI1335_640011;partial=true NZ_CAJZAO010000343.1 Protein Homology CDS 14035 15385 . - 1 ID=cds-WP_224020225.1;Parent=gene-LDO50_RS24880;Dbxref=GenBank:WP_224020225.1;Name=WP_224020225.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;end_range=15385,.;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402065.1;locus_tag=LDO50_RS24880;partial=true;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_224020225.1;transl_table=11 ##sequence-region NZ_CAJZAO010000344.1 1 14767 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000344.1 RefSeq region 1 14767 . + . ID=NZ_CAJZAO010000344.1:1..14767;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_65 NZ_CAJZAO010000344.1 RefSeq gene 1 1211 . + . ID=gene-LDO50_RS24885;Name=LDO50_RS24885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24885;old_locus_tag=BVI1335_650001;partial=true;start_range=.,1 NZ_CAJZAO010000344.1 Protein Homology CDS 1 1211 . + 2 ID=cds-WP_224020226.1;Parent=gene-LDO50_RS24885;Dbxref=GenBank:WP_224020226.1;Name=WP_224020226.1;Note=class I%3B catalyzes the formation of deoxyribonucleotides from their corresponding ribonucleotides;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726008.1;locus_tag=LDO50_RS24885;partial=true;product=ribonucleotide reductase-like protein;protein_id=WP_224020226.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000344.1 RefSeq gene 1300 3207 . - . ID=gene-LDO50_RS24890;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=LDO50_RS24890;old_locus_tag=BVI1335_650002 NZ_CAJZAO010000344.1 Protein Homology CDS 1300 3207 . - 0 ID=cds-WP_011880369.1;Parent=gene-LDO50_RS24890;Dbxref=GenBank:WP_011880369.1;Name=WP_011880369.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880369.1;locus_tag=LDO50_RS24890;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_011880369.1;transl_table=11 NZ_CAJZAO010000344.1 RefSeq gene 3241 3750 . - . ID=gene-LDO50_RS24895;Name=LDO50_RS24895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24895;old_locus_tag=BVI1335_650003 NZ_CAJZAO010000344.1 Protein Homology CDS 3241 3750 . - 0 ID=cds-WP_011880370.1;Parent=gene-LDO50_RS24895;Dbxref=GenBank:WP_011880370.1;Name=WP_011880370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218232.1;locus_tag=LDO50_RS24895;product=BCAM0308 family protein;protein_id=WP_011880370.1;transl_table=11 NZ_CAJZAO010000344.1 RefSeq gene 3822 4469 . - . ID=gene-LDO50_RS24900;Name=LDO50_RS24900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24900;old_locus_tag=BVI1335_650004 NZ_CAJZAO010000344.1 Protein Homology CDS 3822 4469 . - 0 ID=cds-WP_011880371.1;Parent=gene-LDO50_RS24900;Dbxref=GenBank:WP_011880371.1;Name=WP_011880371.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880371.1;locus_tag=LDO50_RS24900;product=BON domain-containing protein;protein_id=WP_011880371.1;transl_table=11 NZ_CAJZAO010000344.1 RefSeq gene 4874 5829 . + . ID=gene-LDO50_RS32035;Name=LDO50_RS32035;end_range=5829,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS32035;old_locus_tag=BVI1335_650005;partial=true NZ_CAJZAO010000344.1 Protein Homology CDS 4874 5829 . + 0 ID=cds-WP_443797867.1;Parent=gene-LDO50_RS32035;Dbxref=GenBank:WP_443797867.1;Name=WP_443797867.1;Ontology_term=GO:0055085,GO:0015562;end_range=5829,.;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218235.1;locus_tag=LDO50_RS32035;partial=true;product=TolC family protein;protein_id=WP_443797867.1;transl_table=11 NZ_CAJZAO010000344.1 RefSeq gene 5840 6379 . + . ID=gene-LDO50_RS32040;Name=LDO50_RS32040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS32040;old_locus_tag=BVI1335_650006;partial=true;start_range=.,5840 NZ_CAJZAO010000344.1 Protein Homology CDS 5840 6379 . + 0 ID=cds-WP_443797868.1;Parent=gene-LDO50_RS32040;Dbxref=GenBank:WP_443797868.1;Name=WP_443797868.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880373.1;locus_tag=LDO50_RS32040;partial=true;product=TolC family protein;protein_id=WP_443797868.1;start_range=.,5840;transl_table=11 NZ_CAJZAO010000344.1 RefSeq gene 6376 7449 . + . ID=gene-LDO50_RS24910;Name=LDO50_RS24910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24910;old_locus_tag=BVI1335_650007 NZ_CAJZAO010000344.1 Protein Homology CDS 6376 7449 . + 0 ID=cds-WP_011880374.1;Parent=gene-LDO50_RS24910;Dbxref=GenBank:WP_011880374.1;Name=WP_011880374.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880374.1;locus_tag=LDO50_RS24910;product=HlyD family secretion protein;protein_id=WP_011880374.1;transl_table=11 NZ_CAJZAO010000344.1 RefSeq gene 7446 10277 . + . ID=gene-LDO50_RS24915;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=LDO50_RS24915;old_locus_tag=BVI1335_650008 NZ_CAJZAO010000344.1 Protein Homology CDS 7446 10277 . + 0 ID=cds-WP_011880375.1;Parent=gene-LDO50_RS24915;Dbxref=GenBank:WP_011880375.1;Name=WP_011880375.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726013.1;locus_tag=LDO50_RS24915;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_011880375.1;transl_table=11 NZ_CAJZAO010000344.1 RefSeq gene 10280 11404 . + . ID=gene-LDO50_RS24920;Name=LDO50_RS24920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24920;old_locus_tag=BVI1335_650009 NZ_CAJZAO010000344.1 Protein Homology CDS 10280 11404 . + 0 ID=cds-WP_011880376.1;Parent=gene-LDO50_RS24920;Dbxref=GenBank:WP_011880376.1;Name=WP_011880376.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007176440.1;locus_tag=LDO50_RS24920;product=ABC transporter permease;protein_id=WP_011880376.1;transl_table=11 NZ_CAJZAO010000344.1 RefSeq gene 11555 11740 . + . ID=gene-LDO50_RS24925;Name=LDO50_RS24925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24925;old_locus_tag=BVI1335_650011 NZ_CAJZAO010000344.1 Protein Homology CDS 11555 11740 . + 0 ID=cds-WP_011880377.1;Parent=gene-LDO50_RS24925;Dbxref=GenBank:WP_011880377.1;Name=WP_011880377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880377.1;locus_tag=LDO50_RS24925;product=DUF2964 family protein;protein_id=WP_011880377.1;transl_table=11 NZ_CAJZAO010000344.1 RefSeq gene 11771 12907 . + . ID=gene-LDO50_RS24930;Name=LDO50_RS24930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24930;old_locus_tag=BVI1335_650012 NZ_CAJZAO010000344.1 Protein Homology CDS 11771 12907 . + 0 ID=cds-WP_011880378.1;Parent=gene-LDO50_RS24930;Dbxref=GenBank:WP_011880378.1;Name=WP_011880378.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853754.1;locus_tag=LDO50_RS24930;product=ABC transporter permease;protein_id=WP_011880378.1;transl_table=11 NZ_CAJZAO010000344.1 RefSeq gene 12904 13608 . + . ID=gene-LDO50_RS24935;Name=LDO50_RS24935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24935;old_locus_tag=BVI1335_650010 NZ_CAJZAO010000344.1 Protein Homology CDS 12904 13608 . + 0 ID=cds-WP_172820474.1;Parent=gene-LDO50_RS24935;Dbxref=GenBank:WP_172820474.1;Name=WP_172820474.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415426.1;locus_tag=LDO50_RS24935;product=ABC transporter ATP-binding protein;protein_id=WP_172820474.1;transl_table=11 NZ_CAJZAO010000344.1 RefSeq gene 13605 14690 . + . ID=gene-LDO50_RS24940;Name=LDO50_RS24940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24940;old_locus_tag=BVI1335_650013 NZ_CAJZAO010000344.1 Protein Homology CDS 13605 14690 . + 0 ID=cds-WP_011880380.1;Parent=gene-LDO50_RS24940;Dbxref=GenBank:WP_011880380.1;Name=WP_011880380.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726016.1;locus_tag=LDO50_RS24940;product=HlyD family secretion protein;protein_id=WP_011880380.1;transl_table=11 ##sequence-region NZ_CAJZAO010000345.1 1 11228 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000345.1 RefSeq region 1 11228 . + . ID=NZ_CAJZAO010000345.1:1..11228;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_66 NZ_CAJZAO010000345.1 RefSeq gene 1 179 . - . ID=gene-LDO50_RS32045;Name=LDO50_RS32045;end_range=179,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS32045;partial=true;start_range=.,1 NZ_CAJZAO010000345.1 Protein Homology CDS 1 179 . - 0 ID=cds-WP_443797869.1;Parent=gene-LDO50_RS32045;Dbxref=GenBank:WP_443797869.1;Name=WP_443797869.1;end_range=179,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012468009.1;locus_tag=LDO50_RS32045;partial=true;product=SctD/MshK family protein;protein_id=WP_443797869.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000345.1 RefSeq pseudogene 190 705 . - . ID=gene-LDO50_RS32050;Name=LDO50_RS32050;end_range=705,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS32050;old_locus_tag=BVI1335_660002;partial=true;pseudo=true;start_range=.,190 NZ_CAJZAO010000345.1 Protein Homology CDS 190 705 . - 1 ID=cds-LDO50_RS32050;Parent=gene-LDO50_RS32050;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=705,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012468009.1;locus_tag=LDO50_RS32050;partial=true;product=type III secretion system inner membrane ring subunit SctD;pseudo=true;start_range=.,190;transl_table=11 NZ_CAJZAO010000345.1 RefSeq pseudogene 716 1198 . - . ID=gene-LDO50_RS32055;Name=LDO50_RS32055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS32055;old_locus_tag=BVI1335_660003;partial=true;pseudo=true;start_range=.,716 NZ_CAJZAO010000345.1 Protein Homology CDS 716 1198 . - 0 ID=cds-LDO50_RS32055;Parent=gene-LDO50_RS32055;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366494.1;locus_tag=LDO50_RS32055;partial=true;product=FHA domain-containing protein;pseudo=true;start_range=.,716;transl_table=11 NZ_CAJZAO010000345.1 RefSeq gene 1179 3218 . - . ID=gene-LDO50_RS24950;Name=sctC;gbkey=Gene;gene=sctC;gene_biotype=protein_coding;locus_tag=LDO50_RS24950;old_locus_tag=BVI1335_660004 NZ_CAJZAO010000345.1 Protein Homology CDS 1179 3218 . - 0 ID=cds-WP_059456032.1;Parent=gene-LDO50_RS24950;Dbxref=GenBank:WP_059456032.1;Name=WP_059456032.1;Ontology_term=GO:0009306;gbkey=CDS;gene=sctC;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216596.1;locus_tag=LDO50_RS24950;product=type III secretion system outer membrane ring subunit SctC;protein_id=WP_059456032.1;transl_table=11 NZ_CAJZAO010000345.1 RefSeq gene 3218 3496 . - . ID=gene-LDO50_RS24955;Name=sctS;gbkey=Gene;gene=sctS;gene_biotype=protein_coding;locus_tag=LDO50_RS24955;old_locus_tag=BVI1335_660005 NZ_CAJZAO010000345.1 Protein Homology CDS 3218 3496 . - 0 ID=cds-WP_014725405.1;Parent=gene-LDO50_RS24955;Dbxref=GenBank:WP_014725405.1;Name=WP_014725405.1;Ontology_term=GO:0009306,GO:0030254,GO:0016020;gbkey=CDS;gene=sctS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA,protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751731.1;locus_tag=LDO50_RS24955;product=type III secretion system export apparatus subunit SctS;protein_id=WP_014725405.1;transl_table=11 NZ_CAJZAO010000345.1 RefSeq gene 3493 5685 . - . ID=gene-LDO50_RS24960;Name=sctV;gbkey=Gene;gene=sctV;gene_biotype=protein_coding;locus_tag=LDO50_RS24960;old_locus_tag=BVI1335_660006 NZ_CAJZAO010000345.1 Protein Homology CDS 3493 5685 . - 0 ID=cds-WP_059991808.1;Parent=gene-LDO50_RS24960;Dbxref=GenBank:WP_059991808.1;Name=WP_059991808.1;Ontology_term=GO:0015031,GO:0016020;gbkey=CDS;gene=sctV;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366496.1;locus_tag=LDO50_RS24960;product=type III secretion system export apparatus subunit SctV;protein_id=WP_059991808.1;transl_table=11 NZ_CAJZAO010000345.1 RefSeq gene 5931 6764 . - . ID=gene-LDO50_RS24965;Name=LDO50_RS24965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24965;old_locus_tag=BVI1335_660008 NZ_CAJZAO010000345.1 Protein Homology CDS 5931 6764 . - 0 ID=cds-WP_059463046.1;Parent=gene-LDO50_RS24965;Dbxref=GenBank:WP_059463046.1;Name=WP_059463046.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216594.1;locus_tag=LDO50_RS24965;product=helix-turn-helix transcriptional regulator;protein_id=WP_059463046.1;transl_table=11 NZ_CAJZAO010000345.1 RefSeq gene 7044 7952 . + . ID=gene-LDO50_RS24970;Name=LDO50_RS24970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24970;old_locus_tag=BVI1335_660009 NZ_CAJZAO010000345.1 Protein Homology CDS 7044 7952 . + 0 ID=cds-WP_059463137.1;Parent=gene-LDO50_RS24970;Dbxref=GenBank:WP_059463137.1;Name=WP_059463137.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354463.1;locus_tag=LDO50_RS24970;product=helix-turn-helix transcriptional regulator;protein_id=WP_059463137.1;transl_table=11 NZ_CAJZAO010000345.1 RefSeq gene 8060 9706 . - . ID=gene-LDO50_RS24975;Name=LDO50_RS24975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24975;old_locus_tag=BVI1335_660010 NZ_CAJZAO010000345.1 Protein Homology CDS 8060 9706 . - 0 ID=cds-WP_011882616.1;Parent=gene-LDO50_RS24975;Dbxref=GenBank:WP_011882616.1;Name=WP_011882616.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498988.1;locus_tag=LDO50_RS24975;product=Nramp family divalent metal transporter;protein_id=WP_011882616.1;transl_table=11 NZ_CAJZAO010000345.1 RefSeq gene 9810 9947 . - . ID=gene-LDO50_RS24980;Name=LDO50_RS24980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24980;old_locus_tag=BVI1335_660011 NZ_CAJZAO010000345.1 Protein Homology CDS 9810 9947 . - 0 ID=cds-WP_014725409.1;Parent=gene-LDO50_RS24980;Dbxref=GenBank:WP_014725409.1;Name=WP_014725409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751726.1;locus_tag=LDO50_RS24980;product=hypothetical protein;protein_id=WP_014725409.1;transl_table=11 NZ_CAJZAO010000345.1 RefSeq gene 10199 10333 . + . ID=gene-LDO50_RS30905;Name=LDO50_RS30905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30905 NZ_CAJZAO010000345.1 GeneMarkS-2+ CDS 10199 10333 . + 0 ID=cds-WP_264159039.1;Parent=gene-LDO50_RS30905;Dbxref=GenBank:WP_264159039.1;Name=WP_264159039.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS30905;product=hypothetical protein;protein_id=WP_264159039.1;transl_table=11 ##sequence-region NZ_CAJZAO010000346.1 1 14559 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000346.1 RefSeq region 1 14559 . + . ID=NZ_CAJZAO010000346.1:1..14559;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_67 NZ_CAJZAO010000346.1 RefSeq gene 1 208 . - . ID=gene-LDO50_RS24985;Name=LDO50_RS24985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24985;partial=true;start_range=.,1 NZ_CAJZAO010000346.1 Protein Homology CDS 1 208 . - 0 ID=cds-WP_224020228.1;Parent=gene-LDO50_RS24985;Dbxref=GenBank:WP_224020228.1;Name=WP_224020228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480302.1;locus_tag=LDO50_RS24985;partial=true;product=hypothetical protein;protein_id=WP_224020228.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000346.1 RefSeq gene 230 1264 . - . ID=gene-LDO50_RS24990;Name=LDO50_RS24990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24990;old_locus_tag=BVI1335_670002 NZ_CAJZAO010000346.1 Protein Homology CDS 230 1264 . - 0 ID=cds-WP_011881047.1;Parent=gene-LDO50_RS24990;Dbxref=GenBank:WP_011881047.1;Name=WP_011881047.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881047.1;locus_tag=LDO50_RS24990;product=ABC transporter ATP-binding protein;protein_id=WP_011881047.1;transl_table=11 NZ_CAJZAO010000346.1 RefSeq gene 1261 2253 . - . ID=gene-LDO50_RS24995;Name=LDO50_RS24995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS24995;old_locus_tag=BVI1335_670003 NZ_CAJZAO010000346.1 Protein Homology CDS 1261 2253 . - 0 ID=cds-WP_011881048.1;Parent=gene-LDO50_RS24995;Dbxref=GenBank:WP_011881048.1;Name=WP_011881048.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353733.1;locus_tag=LDO50_RS24995;product=ABC transporter ATP-binding protein;protein_id=WP_011881048.1;transl_table=11 NZ_CAJZAO010000346.1 RefSeq gene 2255 3157 . - . ID=gene-LDO50_RS25000;Name=LDO50_RS25000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25000;old_locus_tag=BVI1335_670004 NZ_CAJZAO010000346.1 Protein Homology CDS 2255 3157 . - 0 ID=cds-WP_011881049.1;Parent=gene-LDO50_RS25000;Dbxref=GenBank:WP_011881049.1;Name=WP_011881049.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900818.1;locus_tag=LDO50_RS25000;product=ABC transporter permease;protein_id=WP_011881049.1;transl_table=11 NZ_CAJZAO010000346.1 RefSeq gene 3171 4109 . - . ID=gene-LDO50_RS25005;Name=LDO50_RS25005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25005;old_locus_tag=BVI1335_670005 NZ_CAJZAO010000346.1 Protein Homology CDS 3171 4109 . - 0 ID=cds-WP_014724176.1;Parent=gene-LDO50_RS25005;Dbxref=GenBank:WP_014724176.1;Name=WP_014724176.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659808.1;locus_tag=LDO50_RS25005;product=ABC transporter permease subunit;protein_id=WP_014724176.1;transl_table=11 NZ_CAJZAO010000346.1 RefSeq gene 4121 5734 . - . ID=gene-LDO50_RS25010;Name=LDO50_RS25010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25010;old_locus_tag=BVI1335_670006 NZ_CAJZAO010000346.1 Protein Homology CDS 4121 5734 . - 0 ID=cds-WP_224020229.1;Parent=gene-LDO50_RS25010;Dbxref=GenBank:WP_224020229.1;Name=WP_224020229.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659809.1;locus_tag=LDO50_RS25010;product=peptide ABC transporter substrate-binding protein;protein_id=WP_224020229.1;transl_table=11 NZ_CAJZAO010000346.1 RefSeq gene 5913 6494 . - . ID=gene-LDO50_RS25015;Name=LDO50_RS25015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25015;old_locus_tag=BVI1335_670007 NZ_CAJZAO010000346.1 Protein Homology CDS 5913 6494 . - 0 ID=cds-WP_011881052.1;Parent=gene-LDO50_RS25015;Dbxref=GenBank:WP_011881052.1;Name=WP_011881052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900815.1;locus_tag=LDO50_RS25015;product=cupin domain-containing protein;protein_id=WP_011881052.1;transl_table=11 NZ_CAJZAO010000346.1 RefSeq gene 6995 8515 . + . ID=gene-LDO50_RS25020;Name=LDO50_RS25020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25020;old_locus_tag=BVI1335_670008 NZ_CAJZAO010000346.1 Protein Homology CDS 6995 8515 . + 0 ID=cds-WP_011881053.1;Parent=gene-LDO50_RS25020;Dbxref=GenBank:WP_011881053.1;Name=WP_011881053.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753629.1;locus_tag=LDO50_RS25020;product=peptide MFS transporter;protein_id=WP_011881053.1;transl_table=11 NZ_CAJZAO010000346.1 RefSeq gene 8634 8852 . + . ID=gene-LDO50_RS25025;Name=LDO50_RS25025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25025;old_locus_tag=BVI1335_670009 NZ_CAJZAO010000346.1 Protein Homology CDS 8634 8852 . + 0 ID=cds-WP_014724180.1;Parent=gene-LDO50_RS25025;Dbxref=GenBank:WP_014724180.1;Name=WP_014724180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490170.1;locus_tag=LDO50_RS25025;product=hypothetical protein;protein_id=WP_014724180.1;transl_table=11 NZ_CAJZAO010000346.1 RefSeq gene 8925 10049 . - . ID=gene-LDO50_RS25030;Name=LDO50_RS25030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25030;old_locus_tag=BVI1335_670010 NZ_CAJZAO010000346.1 Protein Homology CDS 8925 10049 . - 0 ID=cds-WP_212163348.1;Parent=gene-LDO50_RS25030;Dbxref=GenBank:WP_212163348.1;Name=WP_212163348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216252.1;locus_tag=LDO50_RS25030;product=OpgC domain-containing protein;protein_id=WP_212163348.1;transl_table=11 NZ_CAJZAO010000346.1 RefSeq gene 10407 11306 . - . ID=gene-LDO50_RS25035;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=LDO50_RS25035;old_locus_tag=BVI1335_670011 NZ_CAJZAO010000346.1 Protein Homology CDS 10407 11306 . - 0 ID=cds-WP_011881056.1;Parent=gene-LDO50_RS25035;Dbxref=GenBank:WP_011881056.1;Name=WP_011881056.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480293.1;locus_tag=LDO50_RS25035;product=EamA family transporter RarD;protein_id=WP_011881056.1;transl_table=11 NZ_CAJZAO010000346.1 RefSeq gene 11319 11615 . - . ID=gene-LDO50_RS25040;Name=LDO50_RS25040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25040;old_locus_tag=BVI1335_670012 NZ_CAJZAO010000346.1 Protein Homology CDS 11319 11615 . - 0 ID=cds-WP_011881057.1;Parent=gene-LDO50_RS25040;Dbxref=GenBank:WP_011881057.1;Name=WP_011881057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367074.1;locus_tag=LDO50_RS25040;product=acylphosphatase;protein_id=WP_011881057.1;transl_table=11 NZ_CAJZAO010000346.1 RefSeq gene 11795 12802 . + . ID=gene-LDO50_RS25045;Name=hpnA;gbkey=Gene;gene=hpnA;gene_biotype=protein_coding;locus_tag=LDO50_RS25045;old_locus_tag=BVI1335_670013 NZ_CAJZAO010000346.1 Protein Homology CDS 11795 12802 . + 0 ID=cds-WP_011881058.1;Parent=gene-LDO50_RS25045;Dbxref=GenBank:WP_011881058.1;Name=WP_011881058.1;Ontology_term=GO:0005975,GO:0016757;gbkey=CDS;gene=hpnA;go_function=glycosyltransferase activity|0016757||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255812.1;locus_tag=LDO50_RS25045;product=hopanoid-associated sugar epimerase;protein_id=WP_011881058.1;transl_table=11 NZ_CAJZAO010000346.1 RefSeq gene 12911 14559 . + . ID=gene-LDO50_RS25050;Name=LDO50_RS25050;end_range=14559,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25050;partial=true NZ_CAJZAO010000346.1 Protein Homology CDS 12911 14559 . + 0 ID=cds-WP_224020230.1;Parent=gene-LDO50_RS25050;Dbxref=GenBank:WP_224020230.1;Name=WP_224020230.1;Ontology_term=GO:0006812,GO:0042625,GO:0016020;end_range=14559,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled ion transmembrane transporter activity|0042625||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029076.1;locus_tag=LDO50_RS25050;partial=true;product=heavy metal translocating P-type ATPase;protein_id=WP_224020230.1;transl_table=11 ##sequence-region NZ_CAJZAO010000347.1 1 41032 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000347.1 RefSeq region 1 41032 . + . ID=NZ_CAJZAO010000347.1:1..41032;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_68 NZ_CAJZAO010000347.1 RefSeq pseudogene 1 187 . + . ID=gene-LDO50_RS25055;Name=LDO50_RS25055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS25055;old_locus_tag=BVI1335_680001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000347.1 Protein Homology CDS 1 187 . + 1 ID=cds-LDO50_RS25055;Parent=gene-LDO50_RS25055;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880981.1;locus_tag=LDO50_RS25055;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 790 1626 . + . ID=gene-LDO50_RS25060;Name=LDO50_RS25060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25060;old_locus_tag=BVI1335_680002 NZ_CAJZAO010000347.1 Protein Homology CDS 790 1626 . + 0 ID=cds-WP_011880980.1;Parent=gene-LDO50_RS25060;Dbxref=GenBank:WP_011880980.1;Name=WP_011880980.1;Ontology_term=GO:0010136,GO:0004037,GO:0071522;gbkey=CDS;go_function=allantoicase activity|0004037||IEA,ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880980.1;locus_tag=LDO50_RS25060;product=bifunctional allantoicase/(S)-ureidoglycine aminohydrolase;protein_id=WP_011880980.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 1705 2508 . - . ID=gene-LDO50_RS25065;Name=LDO50_RS25065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25065;old_locus_tag=BVI1335_680003 NZ_CAJZAO010000347.1 Protein Homology CDS 1705 2508 . - 0 ID=cds-WP_059623687.1;Parent=gene-LDO50_RS25065;Dbxref=GenBank:WP_059623687.1;Name=WP_059623687.1;Ontology_term=GO:0016310,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496213.1;locus_tag=LDO50_RS25065;product=aminoglycoside phosphotransferase family protein;protein_id=WP_059623687.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 2814 3101 . + . ID=gene-LDO50_RS25070;Name=LDO50_RS25070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25070;old_locus_tag=BVI1335_680004 NZ_CAJZAO010000347.1 Protein Homology CDS 2814 3101 . + 0 ID=cds-WP_443797870.1;Parent=gene-LDO50_RS25070;Dbxref=GenBank:WP_443797870.1;Name=WP_443797870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724128.1;locus_tag=LDO50_RS25070;product=hypothetical protein;protein_id=WP_443797870.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 3112 3723 . + . ID=gene-LDO50_RS25075;Name=LDO50_RS25075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25075;old_locus_tag=BVI1335_680005 NZ_CAJZAO010000347.1 Protein Homology CDS 3112 3723 . + 0 ID=cds-WP_011880977.1;Parent=gene-LDO50_RS25075;Dbxref=GenBank:WP_011880977.1;Name=WP_011880977.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094611.1;locus_tag=LDO50_RS25075;product=trimeric intracellular cation channel family protein;protein_id=WP_011880977.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 4215 4442 . - . ID=gene-LDO50_RS25080;Name=LDO50_RS25080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25080;old_locus_tag=BVI1335_680006 NZ_CAJZAO010000347.1 Protein Homology CDS 4215 4442 . - 0 ID=cds-WP_011880976.1;Parent=gene-LDO50_RS25080;Dbxref=GenBank:WP_011880976.1;Name=WP_011880976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339294.1;locus_tag=LDO50_RS25080;product=hypothetical protein;protein_id=WP_011880976.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 4514 4897 . - . ID=gene-LDO50_RS25085;Name=LDO50_RS25085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25085;old_locus_tag=BVI1335_680007 NZ_CAJZAO010000347.1 Protein Homology CDS 4514 4897 . - 0 ID=cds-WP_011880975.1;Parent=gene-LDO50_RS25085;Dbxref=GenBank:WP_011880975.1;Name=WP_011880975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754284.1;locus_tag=LDO50_RS25085;product=DUF6232 family protein;protein_id=WP_011880975.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 5007 5267 . - . ID=gene-LDO50_RS25090;Name=LDO50_RS25090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25090;old_locus_tag=BVI1335_680008 NZ_CAJZAO010000347.1 Protein Homology CDS 5007 5267 . - 0 ID=cds-WP_011880974.1;Parent=gene-LDO50_RS25090;Dbxref=GenBank:WP_011880974.1;Name=WP_011880974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353838.1;locus_tag=LDO50_RS25090;product=DUF2866 domain-containing protein;protein_id=WP_011880974.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 5487 6644 . - . ID=gene-LDO50_RS25095;Name=LDO50_RS25095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25095;old_locus_tag=BVI1335_680009 NZ_CAJZAO010000347.1 Protein Homology CDS 5487 6644 . - 0 ID=cds-WP_011880973.1;Parent=gene-LDO50_RS25095;Dbxref=GenBank:WP_011880973.1;Name=WP_011880973.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900901.1;locus_tag=LDO50_RS25095;product=porin;protein_id=WP_011880973.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 6947 7753 . + . ID=gene-LDO50_RS25100;Name=LDO50_RS25100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25100;old_locus_tag=BVI1335_680012 NZ_CAJZAO010000347.1 Protein Homology CDS 6947 7753 . + 0 ID=cds-WP_011880972.1;Parent=gene-LDO50_RS25100;Dbxref=GenBank:WP_011880972.1;Name=WP_011880972.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353840.1;locus_tag=LDO50_RS25100;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_011880972.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 7902 9017 . - . ID=gene-LDO50_RS25105;Name=LDO50_RS25105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25105;old_locus_tag=BVI1335_680013 NZ_CAJZAO010000347.1 Protein Homology CDS 7902 9017 . - 0 ID=cds-WP_011880971.1;Parent=gene-LDO50_RS25105;Dbxref=GenBank:WP_011880971.1;Name=WP_011880971.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331142.1;locus_tag=LDO50_RS25105;product=succinylglutamate desuccinylase/aspartoacylase family protein;protein_id=WP_011880971.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 9274 10056 . - . ID=gene-LDO50_RS25110;Name=LDO50_RS25110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25110;old_locus_tag=BVI1335_680014 NZ_CAJZAO010000347.1 Protein Homology CDS 9274 10056 . - 0 ID=cds-WP_011880970.1;Parent=gene-LDO50_RS25110;Dbxref=GenBank:WP_011880970.1;Name=WP_011880970.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090096.1;locus_tag=LDO50_RS25110;product=ABC transporter substrate-binding protein;protein_id=WP_011880970.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 10283 11203 . - . ID=gene-LDO50_RS25115;Name=LDO50_RS25115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25115;old_locus_tag=BVI1335_680015 NZ_CAJZAO010000347.1 Protein Homology CDS 10283 11203 . - 0 ID=cds-WP_011880969.1;Parent=gene-LDO50_RS25115;Dbxref=GenBank:WP_011880969.1;Name=WP_011880969.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090095.1;locus_tag=LDO50_RS25115;product=LysR family transcriptional regulator;protein_id=WP_011880969.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 11642 12388 . + . ID=gene-LDO50_RS25120;Name=LDO50_RS25120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25120;old_locus_tag=BVI1335_680016 NZ_CAJZAO010000347.1 Protein Homology CDS 11642 12388 . + 0 ID=cds-WP_014724123.1;Parent=gene-LDO50_RS25120;Dbxref=GenBank:WP_014724123.1;Name=WP_014724123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759784.1;locus_tag=LDO50_RS25120;product=SDR family oxidoreductase;protein_id=WP_014724123.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 12540 13394 . + . ID=gene-LDO50_RS25125;Name=LDO50_RS25125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25125;old_locus_tag=BVI1335_680017 NZ_CAJZAO010000347.1 Protein Homology CDS 12540 13394 . + 0 ID=cds-WP_176327461.1;Parent=gene-LDO50_RS25125;Dbxref=GenBank:WP_176327461.1;Name=WP_176327461.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479661.1;locus_tag=LDO50_RS25125;product=DJ-1/PfpI family protein;protein_id=WP_176327461.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 13522 14004 . + . ID=gene-LDO50_RS25130;Name=LDO50_RS25130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25130;old_locus_tag=BVI1335_680018 NZ_CAJZAO010000347.1 Protein Homology CDS 13522 14004 . + 0 ID=cds-WP_224020232.1;Parent=gene-LDO50_RS25130;Dbxref=GenBank:WP_224020232.1;Name=WP_224020232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880966.1;locus_tag=LDO50_RS25130;product=YybH family protein;protein_id=WP_224020232.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 14059 15006 . - . ID=gene-LDO50_RS25135;Name=LDO50_RS25135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25135;old_locus_tag=BVI1335_680019 NZ_CAJZAO010000347.1 Protein Homology CDS 14059 15006 . - 0 ID=cds-WP_011880965.1;Parent=gene-LDO50_RS25135;Dbxref=GenBank:WP_011880965.1;Name=WP_011880965.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372295.1;locus_tag=LDO50_RS25135;product=GlxA family transcriptional regulator;protein_id=WP_011880965.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq pseudogene 15175 15696 . - . ID=gene-LDO50_RS25140;Name=LDO50_RS25140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS25140;partial=true;pseudo=true;start_range=.,15175 NZ_CAJZAO010000347.1 Protein Homology CDS 15175 15696 . - 0 ID=cds-LDO50_RS25140;Parent=gene-LDO50_RS25140;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004552423.1;locus_tag=LDO50_RS25140;partial=true;product=integrase;pseudo=true;start_range=.,15175;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 16124 18574 . + . ID=gene-LDO50_RS25145;Name=LDO50_RS25145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25145;old_locus_tag=BVI1335_680024 NZ_CAJZAO010000347.1 Protein Homology CDS 16124 18574 . + 0 ID=cds-WP_011880963.1;Parent=gene-LDO50_RS25145;Dbxref=GenBank:WP_011880963.1;Name=WP_011880963.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012570.6;locus_tag=LDO50_RS25145;product=dynamin family protein;protein_id=WP_011880963.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 18571 19473 . + . ID=gene-LDO50_RS25150;Name=LDO50_RS25150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25150;old_locus_tag=BVI1335_680025 NZ_CAJZAO010000347.1 Protein Homology CDS 18571 19473 . + 0 ID=cds-WP_011880962.1;Parent=gene-LDO50_RS25150;Dbxref=GenBank:WP_011880962.1;Name=WP_011880962.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025356.6;locus_tag=LDO50_RS25150;product=diguanylate cyclase regulator RdcB family protein;protein_id=WP_011880962.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 19466 20542 . + . ID=gene-LDO50_RS25155;Name=LDO50_RS25155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25155;old_locus_tag=BVI1335_680026 NZ_CAJZAO010000347.1 Protein Homology CDS 19466 20542 . + 0 ID=cds-WP_011880961.1;Parent=gene-LDO50_RS25155;Dbxref=GenBank:WP_011880961.1;Name=WP_011880961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880961.1;locus_tag=LDO50_RS25155;product=patatin-like phospholipase family protein;protein_id=WP_011880961.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq pseudogene 20647 21164 . + . ID=gene-LDO50_RS25160;Name=LDO50_RS25160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS25160;partial=true;pseudo=true;start_range=.,20647 NZ_CAJZAO010000347.1 Protein Homology CDS 20647 21164 . + 0 ID=cds-LDO50_RS25160;Parent=gene-LDO50_RS25160;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612266.1;locus_tag=LDO50_RS25160;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,20647;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 21214 21720 . + . ID=gene-LDO50_RS25165;Name=LDO50_RS25165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25165;old_locus_tag=BVI1335_680028 NZ_CAJZAO010000347.1 Protein Homology CDS 21214 21720 . + 0 ID=cds-WP_011880960.1;Parent=gene-LDO50_RS25165;Dbxref=GenBank:WP_011880960.1;Name=WP_011880960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880960.1;locus_tag=LDO50_RS25165;product=hypothetical protein;protein_id=WP_011880960.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 21804 22397 . - . ID=gene-LDO50_RS25170;Name=LDO50_RS25170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25170;old_locus_tag=BVI1335_680029 NZ_CAJZAO010000347.1 Protein Homology CDS 21804 22397 . - 0 ID=cds-WP_011880959.1;Parent=gene-LDO50_RS25170;Dbxref=GenBank:WP_011880959.1;Name=WP_011880959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724118.1;locus_tag=LDO50_RS25170;product=hypothetical protein;protein_id=WP_011880959.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 22594 23982 . - . ID=gene-LDO50_RS25175;Name=LDO50_RS25175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25175;old_locus_tag=BVI1335_680031 NZ_CAJZAO010000347.1 Protein Homology CDS 22594 23982 . - 0 ID=cds-WP_224020233.1;Parent=gene-LDO50_RS25175;Dbxref=GenBank:WP_224020233.1;Name=WP_224020233.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757206.1;locus_tag=LDO50_RS25175;product=NCS2 family permease;protein_id=WP_224020233.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 24385 25035 . - . ID=gene-LDO50_RS25180;Name=LDO50_RS25180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25180;old_locus_tag=BVI1335_680032 NZ_CAJZAO010000347.1 Protein Homology CDS 24385 25035 . - 0 ID=cds-WP_014724114.1;Parent=gene-LDO50_RS25180;Dbxref=GenBank:WP_014724114.1;Name=WP_014724114.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880957.1;locus_tag=LDO50_RS25180;product=TetR family transcriptional regulator;protein_id=WP_014724114.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 25128 25793 . + . ID=gene-LDO50_RS25185;Name=LDO50_RS25185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25185;old_locus_tag=BVI1335_680033 NZ_CAJZAO010000347.1 Protein Homology CDS 25128 25793 . + 0 ID=cds-WP_011880956.1;Parent=gene-LDO50_RS25185;Dbxref=GenBank:WP_011880956.1;Name=WP_011880956.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880956.1;locus_tag=LDO50_RS25185;product=O-methyltransferase;protein_id=WP_011880956.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 25831 26946 . - . ID=gene-LDO50_RS25190;Name=LDO50_RS25190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25190;old_locus_tag=BVI1335_680034 NZ_CAJZAO010000347.1 Protein Homology CDS 25831 26946 . - 0 ID=cds-WP_059738819.1;Parent=gene-LDO50_RS25190;Dbxref=GenBank:WP_059738819.1;Name=WP_059738819.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216325.1;locus_tag=LDO50_RS25190;product=alkene reductase;protein_id=WP_059738819.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 27011 27817 . - . ID=gene-LDO50_RS25195;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=LDO50_RS25195;old_locus_tag=BVI1335_680035 NZ_CAJZAO010000347.1 Protein Homology CDS 27011 27817 . - 0 ID=cds-WP_059462680.1;Parent=gene-LDO50_RS25195;Dbxref=GenBank:WP_059462680.1;Name=WP_059462680.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366975.1;locus_tag=LDO50_RS25195;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_059462680.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 27939 28883 . - . ID=gene-LDO50_RS25200;Name=LDO50_RS25200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25200;old_locus_tag=BVI1335_680036 NZ_CAJZAO010000347.1 Protein Homology CDS 27939 28883 . - 0 ID=cds-WP_059475020.1;Parent=gene-LDO50_RS25200;Dbxref=GenBank:WP_059475020.1;Name=WP_059475020.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880953.1;locus_tag=LDO50_RS25200;product=TIGR03571 family LLM class oxidoreductase;protein_id=WP_059475020.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 28899 29222 . - . ID=gene-LDO50_RS25205;Name=LDO50_RS25205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25205;old_locus_tag=BVI1335_680037 NZ_CAJZAO010000347.1 Protein Homology CDS 28899 29222 . - 0 ID=cds-WP_176315007.1;Parent=gene-LDO50_RS25205;Dbxref=GenBank:WP_176315007.1;Name=WP_176315007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900915.1;locus_tag=LDO50_RS25205;product=MoaF-related domain-containing protein;protein_id=WP_176315007.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 29252 30454 . - . ID=gene-LDO50_RS25210;Name=LDO50_RS25210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25210;old_locus_tag=BVI1335_680038 NZ_CAJZAO010000347.1 Protein Homology CDS 29252 30454 . - 0 ID=cds-WP_059460661.1;Parent=gene-LDO50_RS25210;Dbxref=GenBank:WP_059460661.1;Name=WP_059460661.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480404.1;locus_tag=LDO50_RS25210;product=MFS transporter;protein_id=WP_059460661.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 30556 31503 . + . ID=gene-LDO50_RS25215;Name=LDO50_RS25215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25215;old_locus_tag=BVI1335_680039 NZ_CAJZAO010000347.1 Protein Homology CDS 30556 31503 . + 0 ID=cds-WP_011880950.1;Parent=gene-LDO50_RS25215;Dbxref=GenBank:WP_011880950.1;Name=WP_011880950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366971.1;locus_tag=LDO50_RS25215;product=LysR family transcriptional regulator;protein_id=WP_011880950.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 31547 33022 . - . ID=gene-LDO50_RS25220;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=LDO50_RS25220;old_locus_tag=BVI1335_680040 NZ_CAJZAO010000347.1 Protein Homology CDS 31547 33022 . - 0 ID=cds-WP_126220661.1;Parent=gene-LDO50_RS25220;Dbxref=GenBank:WP_126220661.1;Name=WP_126220661.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900918.1;locus_tag=LDO50_RS25220;product=glucose-6-phosphate dehydrogenase;protein_id=WP_126220661.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 33227 33805 . + . ID=gene-LDO50_RS25225;Name=LDO50_RS25225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25225;old_locus_tag=BVI1335_680041 NZ_CAJZAO010000347.1 Protein Homology CDS 33227 33805 . + 0 ID=cds-WP_034193364.1;Parent=gene-LDO50_RS25225;Dbxref=GenBank:WP_034193364.1;Name=WP_034193364.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366969.1;locus_tag=LDO50_RS25225;product=TetR/AcrR family transcriptional regulator;protein_id=WP_034193364.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 34013 34888 . + . ID=gene-LDO50_RS25230;Name=LDO50_RS25230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25230;old_locus_tag=BVI1335_680042 NZ_CAJZAO010000347.1 Protein Homology CDS 34013 34888 . + 0 ID=cds-WP_059669369.1;Parent=gene-LDO50_RS25230;Dbxref=GenBank:WP_059669369.1;Name=WP_059669369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880947.1;locus_tag=LDO50_RS25230;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_059669369.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 35025 35603 . - . ID=gene-LDO50_RS25235;Name=LDO50_RS25235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25235;old_locus_tag=BVI1335_680043 NZ_CAJZAO010000347.1 Protein Homology CDS 35025 35603 . - 0 ID=cds-WP_011880946.1;Parent=gene-LDO50_RS25235;Dbxref=GenBank:WP_011880946.1;Name=WP_011880946.1;Note=This protein belongs to a clade of uncharacterized proteins related to peroxidases such as the alkylhydroperoxidase AhpD.;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549018.1;locus_tag=LDO50_RS25235;product=peroxidase-related enzyme;protein_id=WP_011880946.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 35867 37057 . + . ID=gene-LDO50_RS25240;Name=LDO50_RS25240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25240;old_locus_tag=BVI1335_680045 NZ_CAJZAO010000347.1 Protein Homology CDS 35867 37057 . + 0 ID=cds-WP_014724102.1;Parent=gene-LDO50_RS25240;Dbxref=GenBank:WP_014724102.1;Name=WP_014724102.1;Ontology_term=GO:0016787,GO:0016810;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757233.1;locus_tag=LDO50_RS25240;product=M20 aminoacylase family protein;protein_id=WP_014724102.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 37113 38444 . + . ID=gene-LDO50_RS25245;Name=LDO50_RS25245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25245;old_locus_tag=BVI1335_680046 NZ_CAJZAO010000347.1 Protein Homology CDS 37113 38444 . + 0 ID=cds-WP_224020234.1;Parent=gene-LDO50_RS25245;Dbxref=GenBank:WP_224020234.1;Name=WP_224020234.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757234.1;locus_tag=LDO50_RS25245;product=MFS transporter;protein_id=WP_224020234.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 38541 39329 . - . ID=gene-LDO50_RS25250;Name=LDO50_RS25250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25250;old_locus_tag=BVI1335_680047 NZ_CAJZAO010000347.1 Protein Homology CDS 38541 39329 . - 0 ID=cds-WP_014724100.1;Parent=gene-LDO50_RS25250;Dbxref=GenBank:WP_014724100.1;Name=WP_014724100.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010107642.1;locus_tag=LDO50_RS25250;product=IclR family transcriptional regulator;protein_id=WP_014724100.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq gene 39557 40759 . + . ID=gene-LDO50_RS25255;Name=pcaF;gbkey=Gene;gene=pcaF;gene_biotype=protein_coding;locus_tag=LDO50_RS25255;old_locus_tag=BVI1335_680048 NZ_CAJZAO010000347.1 Protein Homology CDS 39557 40759 . + 0 ID=cds-WP_059669371.1;Parent=gene-LDO50_RS25255;Dbxref=GenBank:WP_059669371.1;Name=WP_059669371.1;Ontology_term=GO:0019619,GO:0016747;gbkey=CDS;gene=pcaF;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197326.1;locus_tag=LDO50_RS25255;product=3-oxoadipyl-CoA thiolase;protein_id=WP_059669371.1;transl_table=11 NZ_CAJZAO010000347.1 RefSeq pseudogene 40900 41032 . - . ID=gene-LDO50_RS25260;Name=LDO50_RS25260;end_range=41032,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS25260;old_locus_tag=BVI1335_680049;partial=true;pseudo=true;start_range=.,40900 NZ_CAJZAO010000347.1 Protein Homology CDS 40900 41032 . - 0 ID=cds-LDO50_RS25260;Parent=gene-LDO50_RS25260;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=41032,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724097.1;locus_tag=LDO50_RS25260;partial=true;product=DUF523 domain-containing protein;pseudo=true;start_range=.,40900;transl_table=11 ##sequence-region NZ_CAJZAO010000348.1 1 74306 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000348.1 RefSeq region 1 74306 . + . ID=NZ_CAJZAO010000348.1:1..74306;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_69 NZ_CAJZAO010000348.1 RefSeq gene 1 232 . - . ID=gene-LDO50_RS31160;Name=LDO50_RS31160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31160;partial=true;start_range=.,1 NZ_CAJZAO010000348.1 Protein Homology CDS 1 232 . - 0 ID=cds-WP_372586121.1;Parent=gene-LDO50_RS31160;Dbxref=GenBank:WP_372586121.1;Name=WP_372586121.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364475.1;locus_tag=LDO50_RS31160;partial=true;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_372586121.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000348.1 cmsearch riboswitch 713 967 . - . ID=id-NZ_CAJZAO010000348.1:713..967;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAO010000348.1 RefSeq gene 1133 1483 . + . ID=gene-LDO50_RS25270;Name=LDO50_RS25270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25270;old_locus_tag=BVI1335_690005 NZ_CAJZAO010000348.1 Protein Homology CDS 1133 1483 . + 0 ID=cds-WP_046425691.1;Parent=gene-LDO50_RS25270;Dbxref=GenBank:WP_046425691.1;Name=WP_046425691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600179.1;locus_tag=LDO50_RS25270;product=hypothetical protein;protein_id=WP_046425691.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 1480 1794 . + . ID=gene-LDO50_RS25275;Name=LDO50_RS25275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25275;old_locus_tag=BVI1335_690006 NZ_CAJZAO010000348.1 Protein Homology CDS 1480 1794 . + 0 ID=cds-WP_011885730.1;Parent=gene-LDO50_RS25275;Dbxref=GenBank:WP_011885730.1;Name=WP_011885730.1;Ontology_term=GO:0000917,GO:0000921,GO:0043093;gbkey=CDS;go_process=division septum assembly|0000917||IEA,septin ring assembly|0000921||IEA,FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024874.1;locus_tag=LDO50_RS25275;product=cell division protein ZapA;protein_id=WP_011885730.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 1887 2068 . + . ID=gene-LDO50_RS25280;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=LDO50_RS25280;old_locus_tag=BVI1335_MISCRNA20 NZ_CAJZAO010000348.1 cmsearch ncRNA 1887 2068 . + . ID=rna-LDO50_RS25280;Parent=gene-LDO50_RS25280;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO50_RS25280;product=6S RNA NZ_CAJZAO010000348.1 cmsearch exon 1887 2068 . + . ID=exon-LDO50_RS25280-1;Parent=rna-LDO50_RS25280;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO50_RS25280;product=6S RNA NZ_CAJZAO010000348.1 RefSeq gene 2139 2600 . + . ID=gene-LDO50_RS25285;Name=LDO50_RS25285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25285;old_locus_tag=BVI1335_690007 NZ_CAJZAO010000348.1 Protein Homology CDS 2139 2600 . + 0 ID=cds-WP_011885731.1;Parent=gene-LDO50_RS25285;Dbxref=GenBank:WP_011885731.1;Name=WP_011885731.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896324.1;locus_tag=LDO50_RS25285;product=EVE domain-containing protein;protein_id=WP_011885731.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 2781 3521 . + . ID=gene-LDO50_RS25290;Name=LDO50_RS25290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25290;old_locus_tag=BVI1335_690008 NZ_CAJZAO010000348.1 Protein Homology CDS 2781 3521 . + 0 ID=cds-WP_011885732.1;Parent=gene-LDO50_RS25290;Dbxref=GenBank:WP_011885732.1;Name=WP_011885732.1;Note=The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26%2C from Brucella%2C was shown to assemble into a channel-like structure%2C while YggE from E. coli has been associated with resistance to oxidative stress.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750009.1;locus_tag=LDO50_RS25290;product=SIMPL domain-containing protein;protein_id=WP_011885732.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 3661 4551 . - . ID=gene-LDO50_RS25295;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=LDO50_RS25295;old_locus_tag=BVI1335_690009 NZ_CAJZAO010000348.1 Protein Homology CDS 3661 4551 . - 0 ID=cds-WP_034192612.1;Parent=gene-LDO50_RS25295;Dbxref=GenBank:WP_034192612.1;Name=WP_034192612.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657673.1;locus_tag=LDO50_RS25295;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_034192612.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq pseudogene 4640 5037 . - . ID=gene-LDO50_RS25300;Name=LDO50_RS25300;end_range=5037,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS25300;partial=true;pseudo=true;start_range=.,4640 NZ_CAJZAO010000348.1 Protein Homology CDS 4640 5037 . - 0 ID=cds-LDO50_RS25300;Parent=gene-LDO50_RS25300;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=5037,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851224.1;locus_tag=LDO50_RS25300;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,4640;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 5199 5528 . + . ID=gene-LDO50_RS25305;Name=LDO50_RS25305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25305;old_locus_tag=BVI1335_690010 NZ_CAJZAO010000348.1 Protein Homology CDS 5199 5528 . + 0 ID=cds-WP_011885733.1;Parent=gene-LDO50_RS25305;Dbxref=GenBank:WP_011885733.1;Name=WP_011885733.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496118.1;locus_tag=LDO50_RS25305;product=c-type cytochrome;protein_id=WP_011885733.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 5674 6423 . - . ID=gene-LDO50_RS25310;Name=LDO50_RS25310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25310;old_locus_tag=BVI1335_690012 NZ_CAJZAO010000348.1 Protein Homology CDS 5674 6423 . - 0 ID=cds-WP_034192614.1;Parent=gene-LDO50_RS25310;Dbxref=GenBank:WP_034192614.1;Name=WP_034192614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478084.1;locus_tag=LDO50_RS25310;product=DUF2486 family protein;protein_id=WP_034192614.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 6449 6865 . - . ID=gene-LDO50_RS25315;Name=LDO50_RS25315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25315;old_locus_tag=BVI1335_690013 NZ_CAJZAO010000348.1 Protein Homology CDS 6449 6865 . - 0 ID=cds-WP_011885735.1;Parent=gene-LDO50_RS25315;Dbxref=GenBank:WP_011885735.1;Name=WP_011885735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750016.1;locus_tag=LDO50_RS25315;product=DNA polymerase III subunit chi;protein_id=WP_011885735.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 6900 8411 . - . ID=gene-LDO50_RS25320;Name=LDO50_RS25320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25320;old_locus_tag=BVI1335_690014 NZ_CAJZAO010000348.1 Protein Homology CDS 6900 8411 . - 0 ID=cds-WP_011885736.1;Parent=gene-LDO50_RS25320;Dbxref=GenBank:WP_011885736.1;Name=WP_011885736.1;Ontology_term=GO:0019538,GO:0070006;gbkey=CDS;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352915.1;locus_tag=LDO50_RS25320;product=leucyl aminopeptidase;protein_id=WP_011885736.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 8534 9625 . + . ID=gene-LDO50_RS25325;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=LDO50_RS25325;old_locus_tag=BVI1335_690015 NZ_CAJZAO010000348.1 Protein Homology CDS 8534 9625 . + 0 ID=cds-WP_034192615.1;Parent=gene-LDO50_RS25325;Dbxref=GenBank:WP_034192615.1;Name=WP_034192615.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522573.1;locus_tag=LDO50_RS25325;product=LPS export ABC transporter permease LptF;protein_id=WP_034192615.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 9629 10777 . + . ID=gene-LDO50_RS25330;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=LDO50_RS25330;old_locus_tag=BVI1335_690016 NZ_CAJZAO010000348.1 Protein Homology CDS 9629 10777 . + 0 ID=cds-WP_045578868.1;Parent=gene-LDO50_RS25330;Dbxref=GenBank:WP_045578868.1;Name=WP_045578868.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009903370.1;locus_tag=LDO50_RS25330;product=LPS export ABC transporter permease LptG;protein_id=WP_045578868.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 10803 11186 . + . ID=gene-LDO50_RS25335;Name=LDO50_RS25335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25335;old_locus_tag=BVI1335_690017 NZ_CAJZAO010000348.1 Protein Homology CDS 10803 11186 . + 0 ID=cds-WP_034192617.1;Parent=gene-LDO50_RS25335;Dbxref=GenBank:WP_034192617.1;Name=WP_034192617.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657682.1;locus_tag=LDO50_RS25335;product=sirohydrochlorin chelatase;protein_id=WP_034192617.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 11265 12014 . - . ID=gene-LDO50_RS25340;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=LDO50_RS25340;old_locus_tag=BVI1335_690018 NZ_CAJZAO010000348.1 Protein Homology CDS 11265 12014 . - 0 ID=cds-WP_011885740.1;Parent=gene-LDO50_RS25340;Dbxref=GenBank:WP_011885740.1;Name=WP_011885740.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750021.1;locus_tag=LDO50_RS25340;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_011885740.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 12091 13407 . - . ID=gene-LDO50_RS25345;Name=LDO50_RS25345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25345;old_locus_tag=BVI1335_690019 NZ_CAJZAO010000348.1 Protein Homology CDS 12091 13407 . - 0 ID=cds-WP_224020236.1;Parent=gene-LDO50_RS25345;Dbxref=GenBank:WP_224020236.1;Name=WP_224020236.1;Ontology_term=GO:0006790,GO:0000166,GO:0003924,GO:0004781;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,GTPase activity|0003924||IEA,sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602383.1;locus_tag=LDO50_RS25345;product=sulfate adenylyltransferase subunit 1;protein_id=WP_224020236.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 13430 14392 . - . ID=gene-LDO50_RS25350;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=LDO50_RS25350;old_locus_tag=BVI1335_690020 NZ_CAJZAO010000348.1 Protein Homology CDS 13430 14392 . - 0 ID=cds-WP_011885742.1;Parent=gene-LDO50_RS25350;Dbxref=GenBank:WP_011885742.1;Name=WP_011885742.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010114318.1;locus_tag=LDO50_RS25350;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_011885742.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 14468 15214 . - . ID=gene-LDO50_RS25355;Name=LDO50_RS25355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25355;old_locus_tag=BVI1335_690021 NZ_CAJZAO010000348.1 Protein Homology CDS 14468 15214 . - 0 ID=cds-WP_014723478.1;Parent=gene-LDO50_RS25355;Dbxref=GenBank:WP_014723478.1;Name=WP_014723478.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657686.1;locus_tag=LDO50_RS25355;product=phosphoadenylyl-sulfate reductase;protein_id=WP_014723478.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 15211 15753 . - . ID=gene-LDO50_RS25360;Name=LDO50_RS25360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25360;old_locus_tag=BVI1335_690022 NZ_CAJZAO010000348.1 Protein Homology CDS 15211 15753 . - 0 ID=cds-WP_011885744.1;Parent=gene-LDO50_RS25360;Dbxref=GenBank:WP_011885744.1;Name=WP_011885744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892528.1;locus_tag=LDO50_RS25360;product=DUF934 domain-containing protein;protein_id=WP_011885744.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 15779 17458 . - . ID=gene-LDO50_RS25365;Name=LDO50_RS25365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25365;old_locus_tag=BVI1335_690023 NZ_CAJZAO010000348.1 Protein Homology CDS 15779 17458 . - 0 ID=cds-WP_011885745.1;Parent=gene-LDO50_RS25365;Dbxref=GenBank:WP_011885745.1;Name=WP_011885745.1;Ontology_term=GO:0016491,GO:0020037,GO:0046872,GO:0050311,GO:0051536,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA,sulfite reductase (ferredoxin) activity|0050311||IEA,iron-sulfur cluster binding|0051536||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601281.1;locus_tag=LDO50_RS25365;product=nitrite/sulfite reductase;protein_id=WP_011885745.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 17675 18616 . + . ID=gene-LDO50_RS25370;Name=LDO50_RS25370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25370;old_locus_tag=BVI1335_690024 NZ_CAJZAO010000348.1 Protein Homology CDS 17675 18616 . + 0 ID=cds-WP_014723479.1;Parent=gene-LDO50_RS25370;Dbxref=GenBank:WP_014723479.1;Name=WP_014723479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065144.1;locus_tag=LDO50_RS25370;product=CysB family HTH-type transcriptional regulator;protein_id=WP_014723479.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 18694 19851 . + . ID=gene-LDO50_RS25375;Name=LDO50_RS25375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25375;old_locus_tag=BVI1335_690025 NZ_CAJZAO010000348.1 Protein Homology CDS 18694 19851 . + 0 ID=cds-WP_224020237.1;Parent=gene-LDO50_RS25375;Dbxref=GenBank:WP_224020237.1;Name=WP_224020237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398570.1;locus_tag=LDO50_RS25375;product=ABC transporter substrate-binding protein;protein_id=WP_224020237.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 19949 20033 . + . ID=gene-LDO50_RS25380;Name=LDO50_RS25380;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS25380;old_locus_tag=BVI1335_TRNA5 NZ_CAJZAO010000348.1 tRNAscan-SE tRNA 19949 20033 . + . ID=rna-LDO50_RS25380;Parent=gene-LDO50_RS25380;anticodon=(pos:19983..19985);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS25380;product=tRNA-Leu NZ_CAJZAO010000348.1 tRNAscan-SE exon 19949 20033 . + . ID=exon-LDO50_RS25380-1;Parent=rna-LDO50_RS25380;anticodon=(pos:19983..19985);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS25380;product=tRNA-Leu NZ_CAJZAO010000348.1 RefSeq gene 20162 21064 . - . ID=gene-LDO50_RS25385;Name=LDO50_RS25385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25385;old_locus_tag=BVI1335_690027 NZ_CAJZAO010000348.1 Protein Homology CDS 20162 21064 . - 0 ID=cds-WP_011885748.1;Parent=gene-LDO50_RS25385;Dbxref=GenBank:WP_011885748.1;Name=WP_011885748.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482979.1;locus_tag=LDO50_RS25385;product=LysR family transcriptional regulator;protein_id=WP_011885748.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 21185 21922 . + . ID=gene-LDO50_RS25390;Name=LDO50_RS25390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25390;old_locus_tag=BVI1335_690030 NZ_CAJZAO010000348.1 Protein Homology CDS 21185 21922 . + 0 ID=cds-WP_059475187.1;Parent=gene-LDO50_RS25390;Dbxref=GenBank:WP_059475187.1;Name=WP_059475187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545991.1;locus_tag=LDO50_RS25390;product=SDR family oxidoreductase;protein_id=WP_059475187.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 21967 22866 . + . ID=gene-LDO50_RS25395;Name=LDO50_RS25395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25395;old_locus_tag=BVI1335_690029 NZ_CAJZAO010000348.1 Protein Homology CDS 21967 22866 . + 0 ID=cds-WP_224020238.1;Parent=gene-LDO50_RS25395;Dbxref=GenBank:WP_224020238.1;Name=WP_224020238.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723482.1;locus_tag=LDO50_RS25395;product=SDR family oxidoreductase;protein_id=WP_224020238.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq pseudogene 22977 23195 . - . ID=gene-LDO50_RS31165;Name=LDO50_RS31165;end_range=23195,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS31165;partial=true;pseudo=true;start_range=.,22977 NZ_CAJZAO010000348.1 Protein Homology CDS 22977 23195 . - 0 ID=cds-LDO50_RS31165;Parent=gene-LDO50_RS31165;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=23195,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545997.1;locus_tag=LDO50_RS31165;partial=true;product=DinB family protein;pseudo=true;start_range=.,22977;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 23201 23917 . + . ID=gene-LDO50_RS25405;Name=LDO50_RS25405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25405;old_locus_tag=BVI1335_690031 NZ_CAJZAO010000348.1 Protein Homology CDS 23201 23917 . + 0 ID=cds-WP_014723483.1;Parent=gene-LDO50_RS25405;Dbxref=GenBank:WP_014723483.1;Name=WP_014723483.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896298.1;locus_tag=LDO50_RS25405;product=pseudouridine synthase;protein_id=WP_014723483.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 24023 24211 . + . ID=gene-LDO50_RS25410;Name=LDO50_RS25410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25410;old_locus_tag=BVI1335_690032 NZ_CAJZAO010000348.1 Protein Homology CDS 24023 24211 . + 0 ID=cds-WP_011885752.1;Parent=gene-LDO50_RS25410;Dbxref=GenBank:WP_011885752.1;Name=WP_011885752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546000.1;locus_tag=LDO50_RS25410;product=hypothetical protein;protein_id=WP_011885752.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 24194 25231 . - . ID=gene-LDO50_RS25415;Name=LDO50_RS25415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25415;old_locus_tag=BVI1335_690033 NZ_CAJZAO010000348.1 Protein Homology CDS 24194 25231 . - 0 ID=cds-WP_059475188.1;Parent=gene-LDO50_RS25415;Dbxref=GenBank:WP_059475188.1;Name=WP_059475188.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492821.1;locus_tag=LDO50_RS25415;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_059475188.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 25338 26369 . + . ID=gene-LDO50_RS25420;Name=LDO50_RS25420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25420;old_locus_tag=BVI1335_690034 NZ_CAJZAO010000348.1 Protein Homology CDS 25338 26369 . + 0 ID=cds-WP_011885754.1;Parent=gene-LDO50_RS25420;Dbxref=GenBank:WP_011885754.1;Name=WP_011885754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413312.1;locus_tag=LDO50_RS25420;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;protein_id=WP_011885754.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 26662 27846 . + . ID=gene-LDO50_RS25425;Name=LDO50_RS25425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25425;old_locus_tag=BVI1335_690035 NZ_CAJZAO010000348.1 Protein Homology CDS 26662 27846 . + 0 ID=cds-WP_011885755.1;Parent=gene-LDO50_RS25425;Dbxref=GenBank:WP_011885755.1;Name=WP_011885755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522595.1;locus_tag=LDO50_RS25425;product=acetylornithine transaminase;protein_id=WP_011885755.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 27860 28315 . + . ID=gene-LDO50_RS25430;Name=LDO50_RS25430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25430;old_locus_tag=BVI1335_690036 NZ_CAJZAO010000348.1 Protein Homology CDS 27860 28315 . + 0 ID=cds-WP_011885756.1;Parent=gene-LDO50_RS25430;Dbxref=GenBank:WP_011885756.1;Name=WP_011885756.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757315.1;locus_tag=LDO50_RS25430;product=GNAT family acetyltransferase;protein_id=WP_011885756.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 28345 29016 . - . ID=gene-LDO50_RS25435;Name=LDO50_RS25435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25435;old_locus_tag=BVI1335_690037 NZ_CAJZAO010000348.1 Protein Homology CDS 28345 29016 . - 0 ID=cds-WP_224020239.1;Parent=gene-LDO50_RS25435;Dbxref=GenBank:WP_224020239.1;Name=WP_224020239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090952.1;locus_tag=LDO50_RS25435;product=DUF2278 family protein;protein_id=WP_224020239.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 29258 29974 . - . ID=gene-LDO50_RS25440;Name=LDO50_RS25440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25440;old_locus_tag=BVI1335_690038 NZ_CAJZAO010000348.1 Protein Homology CDS 29258 29974 . - 0 ID=cds-WP_011885758.1;Parent=gene-LDO50_RS25440;Dbxref=GenBank:WP_011885758.1;Name=WP_011885758.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478054.1;locus_tag=LDO50_RS25440;product=ABC transporter ATP-binding protein;protein_id=WP_011885758.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 29974 30750 . - . ID=gene-LDO50_RS25445;Name=LDO50_RS25445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25445;old_locus_tag=BVI1335_690039 NZ_CAJZAO010000348.1 Protein Homology CDS 29974 30750 . - 0 ID=cds-WP_011885759.1;Parent=gene-LDO50_RS25445;Dbxref=GenBank:WP_011885759.1;Name=WP_011885759.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008351156.1;locus_tag=LDO50_RS25445;product=ABC transporter ATP-binding protein;protein_id=WP_011885759.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 30775 31944 . - . ID=gene-LDO50_RS25450;Name=LDO50_RS25450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25450;old_locus_tag=BVI1335_690040 NZ_CAJZAO010000348.1 Protein Homology CDS 30775 31944 . - 0 ID=cds-WP_011885760.1;Parent=gene-LDO50_RS25450;Dbxref=GenBank:WP_011885760.1;Name=WP_011885760.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478052.1;locus_tag=LDO50_RS25450;product=ABC transporter permease subunit;protein_id=WP_011885760.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 31964 32914 . - . ID=gene-LDO50_RS25455;Name=LDO50_RS25455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25455;old_locus_tag=BVI1335_690041 NZ_CAJZAO010000348.1 Protein Homology CDS 31964 32914 . - 0 ID=cds-WP_011885761.1;Parent=gene-LDO50_RS25455;Dbxref=GenBank:WP_011885761.1;Name=WP_011885761.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885761.1;locus_tag=LDO50_RS25455;product=branched-chain amino acid ABC transporter permease;protein_id=WP_011885761.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 33126 33959 . - . ID=gene-LDO50_RS25460;Name=LDO50_RS25460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25460;old_locus_tag=BVI1335_690042 NZ_CAJZAO010000348.1 Protein Homology CDS 33126 33959 . - 0 ID=cds-WP_224020242.1;Parent=gene-LDO50_RS25460;Dbxref=GenBank:WP_224020242.1;Name=WP_224020242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885762.1;locus_tag=LDO50_RS25460;product=branched-chain amino acid ABC transporter;protein_id=WP_224020242.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 34230 35210 . - . ID=gene-LDO50_RS25465;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=LDO50_RS25465;old_locus_tag=BVI1335_690043 NZ_CAJZAO010000348.1 Protein Homology CDS 34230 35210 . - 0 ID=cds-WP_011885763.1;Parent=gene-LDO50_RS25465;Dbxref=GenBank:WP_011885763.1;Name=WP_011885763.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892570.1;locus_tag=LDO50_RS25465;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_011885763.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 35213 35668 . - . ID=gene-LDO50_RS25470;Name=LDO50_RS25470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25470;old_locus_tag=BVI1335_690044 NZ_CAJZAO010000348.1 Protein Homology CDS 35213 35668 . - 0 ID=cds-WP_011885764.1;Parent=gene-LDO50_RS25470;Dbxref=GenBank:WP_011885764.1;Name=WP_011885764.1;Ontology_term=GO:0006457,GO:0003755,GO:0046872;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,metal ion binding|0046872||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892571.1;locus_tag=LDO50_RS25470;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_011885764.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 35804 36553 . + . ID=gene-LDO50_RS25475;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=LDO50_RS25475;old_locus_tag=BVI1335_690045 NZ_CAJZAO010000348.1 Protein Homology CDS 35804 36553 . + 0 ID=cds-WP_224020240.1;Parent=gene-LDO50_RS25475;Dbxref=GenBank:WP_224020240.1;Name=WP_224020240.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885765.1;locus_tag=LDO50_RS25475;product=RadC family protein;protein_id=WP_224020240.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 36793 37026 . + . ID=gene-LDO50_RS25480;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=LDO50_RS25480;old_locus_tag=BVI1335_690046 NZ_CAJZAO010000348.1 Protein Homology CDS 36793 37026 . + 0 ID=cds-WP_004186391.1;Parent=gene-LDO50_RS25480;Dbxref=GenBank:WP_004186391.1;Name=WP_004186391.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007586227.1;locus_tag=LDO50_RS25480;product=50S ribosomal protein L28;protein_id=WP_004186391.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 37044 37211 . + . ID=gene-LDO50_RS25485;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=LDO50_RS25485;old_locus_tag=BVI1335_690047 NZ_CAJZAO010000348.1 Protein Homology CDS 37044 37211 . + 0 ID=cds-WP_006478046.1;Parent=gene-LDO50_RS25485;Dbxref=GenBank:WP_006478046.1;Name=WP_006478046.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180630.1;locus_tag=LDO50_RS25485;product=50S ribosomal protein L33;protein_id=WP_006478046.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 37384 38970 . + . ID=gene-LDO50_RS25490;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=LDO50_RS25490;old_locus_tag=BVI1335_690048 NZ_CAJZAO010000348.1 Protein Homology CDS 37384 38970 . + 0 ID=cds-WP_011885766.1;Parent=gene-LDO50_RS25490;Dbxref=GenBank:WP_011885766.1;Name=WP_011885766.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885766.1;locus_tag=LDO50_RS25490;product=L-aspartate oxidase;protein_id=WP_011885766.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 39049 39930 . - . ID=gene-LDO50_RS25495;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=LDO50_RS25495;old_locus_tag=BVI1335_690049 NZ_CAJZAO010000348.1 Protein Homology CDS 39049 39930 . - 0 ID=cds-WP_045578847.1;Parent=gene-LDO50_RS25495;Dbxref=GenBank:WP_045578847.1;Name=WP_045578847.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329065.1;locus_tag=LDO50_RS25495;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_045578847.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 39927 41063 . - . ID=gene-LDO50_RS25500;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=LDO50_RS25500;old_locus_tag=BVI1335_690050 NZ_CAJZAO010000348.1 Protein Homology CDS 39927 41063 . - 0 ID=cds-WP_014723490.1;Parent=gene-LDO50_RS25500;Dbxref=GenBank:WP_014723490.1;Name=WP_014723490.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329066.1;locus_tag=LDO50_RS25500;product=quinolinate synthase NadA;protein_id=WP_014723490.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 41297 42493 . - . ID=gene-LDO50_RS25505;Name=LDO50_RS25505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25505;old_locus_tag=BVI1335_690051 NZ_CAJZAO010000348.1 Protein Homology CDS 41297 42493 . - 0 ID=cds-WP_011885769.1;Parent=gene-LDO50_RS25505;Dbxref=GenBank:WP_011885769.1;Name=WP_011885769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012434118.1;locus_tag=LDO50_RS25505;product=DesA family fatty acid desaturase;protein_id=WP_011885769.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 42713 44104 . - . ID=gene-LDO50_RS25510;Name=LDO50_RS25510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25510;old_locus_tag=BVI1335_690052 NZ_CAJZAO010000348.1 Protein Homology CDS 42713 44104 . - 0 ID=cds-WP_059475190.1;Parent=gene-LDO50_RS25510;Dbxref=GenBank:WP_059475190.1;Name=WP_059475190.1;Ontology_term=GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760013.1;locus_tag=LDO50_RS25510;product=mechanosensitive ion channel family protein;protein_id=WP_059475190.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 44123 45385 . - . ID=gene-LDO50_RS25515;Name=LDO50_RS25515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25515;old_locus_tag=BVI1335_690053 NZ_CAJZAO010000348.1 Protein Homology CDS 44123 45385 . - 0 ID=cds-WP_011885771.1;Parent=gene-LDO50_RS25515;Dbxref=GenBank:WP_011885771.1;Name=WP_011885771.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554551.1;locus_tag=LDO50_RS25515;product=RsmB/NOP family class I SAM-dependent RNA methyltransferase;protein_id=WP_011885771.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 45382 46044 . - . ID=gene-LDO50_RS25520;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=LDO50_RS25520;old_locus_tag=BVI1335_690054 NZ_CAJZAO010000348.1 Protein Homology CDS 45382 46044 . - 0 ID=cds-WP_011885772.1;Parent=gene-LDO50_RS25520;Dbxref=GenBank:WP_011885772.1;Name=WP_011885772.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892597.1;locus_tag=LDO50_RS25520;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_011885772.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 46167 47159 . + . ID=gene-LDO50_RS25525;Name=LDO50_RS25525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25525;old_locus_tag=BVI1335_690055 NZ_CAJZAO010000348.1 Protein Homology CDS 46167 47159 . + 0 ID=cds-WP_011885773.1;Parent=gene-LDO50_RS25525;Dbxref=GenBank:WP_011885773.1;Name=WP_011885773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750061.1;locus_tag=LDO50_RS25525;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_011885773.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 47262 50099 . + . ID=gene-LDO50_RS25530;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=LDO50_RS25530;old_locus_tag=BVI1335_690056 NZ_CAJZAO010000348.1 Protein Homology CDS 47262 50099 . + 0 ID=cds-WP_034192629.1;Parent=gene-LDO50_RS25530;Dbxref=GenBank:WP_034192629.1;Name=WP_034192629.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352960.1;locus_tag=LDO50_RS25530;product=isoleucine--tRNA ligase;protein_id=WP_034192629.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 50102 50602 . + . ID=gene-LDO50_RS25535;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=LDO50_RS25535;old_locus_tag=BVI1335_690057 NZ_CAJZAO010000348.1 Protein Homology CDS 50102 50602 . + 0 ID=cds-WP_011885775.1;Parent=gene-LDO50_RS25535;Dbxref=GenBank:WP_011885775.1;Name=WP_011885775.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333949.1;locus_tag=LDO50_RS25535;product=signal peptidase II;protein_id=WP_011885775.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 50670 51881 . + . ID=gene-LDO50_RS25540;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=LDO50_RS25540;old_locus_tag=BVI1335_690058 NZ_CAJZAO010000348.1 Protein Homology CDS 50670 51881 . + 0 ID=cds-WP_011885776.1;Parent=gene-LDO50_RS25540;Dbxref=GenBank:WP_011885776.1;Name=WP_011885776.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851204.1;locus_tag=LDO50_RS25540;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_011885776.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 51937 52383 . + . ID=gene-LDO50_RS25545;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=LDO50_RS25545;old_locus_tag=BVI1335_690059 NZ_CAJZAO010000348.1 Protein Homology CDS 51937 52383 . + 0 ID=cds-WP_011885777.1;Parent=gene-LDO50_RS25545;Dbxref=GenBank:WP_011885777.1;Name=WP_011885777.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602380.1;locus_tag=LDO50_RS25545;product=dUTP diphosphatase;protein_id=WP_011885777.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 52439 53209 . - . ID=gene-LDO50_RS25550;Name=LDO50_RS25550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25550;old_locus_tag=BVI1335_690060 NZ_CAJZAO010000348.1 Protein Homology CDS 52439 53209 . - 0 ID=cds-WP_011885778.1;Parent=gene-LDO50_RS25550;Dbxref=GenBank:WP_011885778.1;Name=WP_011885778.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329071.1;locus_tag=LDO50_RS25550;product=COG4705 family protein;protein_id=WP_011885778.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 53340 54719 . - . ID=gene-LDO50_RS25555;Name=LDO50_RS25555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25555;old_locus_tag=BVI1335_690061 NZ_CAJZAO010000348.1 Protein Homology CDS 53340 54719 . - 0 ID=cds-WP_212186558.1;Parent=gene-LDO50_RS25555;Dbxref=GenBank:WP_212186558.1;Name=WP_212186558.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488957.1;locus_tag=LDO50_RS25555;product=amino acid permease;protein_id=WP_212186558.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 54823 57123 . - . ID=gene-LDO50_RS25560;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=LDO50_RS25560;old_locus_tag=BVI1335_690062 NZ_CAJZAO010000348.1 Protein Homology CDS 54823 57123 . - 0 ID=cds-WP_011885780.1;Parent=gene-LDO50_RS25560;Dbxref=GenBank:WP_011885780.1;Name=WP_011885780.1;Ontology_term=GO:0006508,GO:0043335,GO:0004176,GO:0016887,GO:0009368;gbkey=CDS;gene=clpA;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546019.1;locus_tag=LDO50_RS25560;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_011885780.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 57120 57434 . - . ID=gene-LDO50_RS25565;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=LDO50_RS25565;old_locus_tag=BVI1335_690063 NZ_CAJZAO010000348.1 Protein Homology CDS 57120 57434 . - 0 ID=cds-WP_006398529.1;Parent=gene-LDO50_RS25565;Dbxref=GenBank:WP_006398529.1;Name=WP_006398529.1;gbkey=CDS;gene=clpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012080368.1;locus_tag=LDO50_RS25565;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_006398529.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 57981 58184 . + . ID=gene-LDO50_RS25570;Name=LDO50_RS25570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25570;old_locus_tag=BVI1335_690064 NZ_CAJZAO010000348.1 Protein Homology CDS 57981 58184 . + 0 ID=cds-WP_004196460.1;Parent=gene-LDO50_RS25570;Dbxref=GenBank:WP_004196460.1;Name=WP_004196460.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016687461.1;locus_tag=LDO50_RS25570;product=cold-shock protein;protein_id=WP_004196460.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 58363 59961 . - . ID=gene-LDO50_RS25575;Name=LDO50_RS25575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25575;old_locus_tag=BVI1335_690065 NZ_CAJZAO010000348.1 Protein Homology CDS 58363 59961 . - 0 ID=cds-WP_060081623.1;Parent=gene-LDO50_RS25575;Dbxref=GenBank:WP_060081623.1;Name=WP_060081623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546020.1;locus_tag=LDO50_RS25575;product=multicopper oxidase family protein;protein_id=WP_060081623.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 60685 60909 . + . ID=gene-LDO50_RS25580;Name=LDO50_RS25580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25580;old_locus_tag=BVI1335_690066 NZ_CAJZAO010000348.1 Protein Homology CDS 60685 60909 . + 0 ID=cds-WP_011885782.1;Parent=gene-LDO50_RS25580;Dbxref=GenBank:WP_011885782.1;Name=WP_011885782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478028.1;locus_tag=LDO50_RS25580;product=hypothetical protein;protein_id=WP_011885782.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 61015 63243 . - . ID=gene-LDO50_RS25585;Name=LDO50_RS25585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25585;old_locus_tag=BVI1335_690067 NZ_CAJZAO010000348.1 Protein Homology CDS 61015 63243 . - 0 ID=cds-WP_014723497.1;Parent=gene-LDO50_RS25585;Dbxref=GenBank:WP_014723497.1;Name=WP_014723497.1;Ontology_term=GO:0006099,GO:0004450;gbkey=CDS;go_function=isocitrate dehydrogenase (NADP+) activity|0004450||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723497.1;locus_tag=LDO50_RS25585;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_014723497.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 63524 64780 . - . ID=gene-LDO50_RS25590;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=LDO50_RS25590;old_locus_tag=BVI1335_690068 NZ_CAJZAO010000348.1 Protein Homology CDS 63524 64780 . - 0 ID=cds-WP_011885784.1;Parent=gene-LDO50_RS25590;Dbxref=GenBank:WP_011885784.1;Name=WP_011885784.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069124.1;locus_tag=LDO50_RS25590;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_011885784.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 65065 65643 . + . ID=gene-LDO50_RS25595;Name=LDO50_RS25595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25595;old_locus_tag=BVI1335_690070 NZ_CAJZAO010000348.1 Protein Homology CDS 65065 65643 . + 0 ID=cds-WP_014723498.1;Parent=gene-LDO50_RS25595;Dbxref=GenBank:WP_014723498.1;Name=WP_014723498.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0016866;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,intramolecular transferase activity|0016866||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885785.1;locus_tag=LDO50_RS25595;product=pseudouridine synthase;protein_id=WP_014723498.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 65945 66157 . + . ID=gene-LDO50_RS25600;Name=LDO50_RS25600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25600;old_locus_tag=BVI1335_690072 NZ_CAJZAO010000348.1 Protein Homology CDS 65945 66157 . + 0 ID=cds-WP_072465376.1;Parent=gene-LDO50_RS25600;Dbxref=GenBank:WP_072465376.1;Name=WP_072465376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398520.1;locus_tag=LDO50_RS25600;product=hypothetical protein;protein_id=WP_072465376.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 66317 66817 . + . ID=gene-LDO50_RS25605;Name=LDO50_RS25605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25605;old_locus_tag=BVI1335_690073 NZ_CAJZAO010000348.1 Protein Homology CDS 66317 66817 . + 0 ID=cds-WP_059739857.1;Parent=gene-LDO50_RS25605;Dbxref=GenBank:WP_059739857.1;Name=WP_059739857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546024.1;locus_tag=LDO50_RS25605;product=DUF192 domain-containing protein;protein_id=WP_059739857.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 67035 69146 . + . ID=gene-LDO50_RS25610;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=LDO50_RS25610;old_locus_tag=BVI1335_690074 NZ_CAJZAO010000348.1 Protein Homology CDS 67035 69146 . + 0 ID=cds-WP_011885787.1;Parent=gene-LDO50_RS25610;Dbxref=GenBank:WP_011885787.1;Name=WP_011885787.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329077.1;locus_tag=LDO50_RS25610;product=elongation factor G;protein_id=WP_011885787.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 69316 70326 . + . ID=gene-LDO50_RS25615;Name=LDO50_RS25615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25615;old_locus_tag=BVI1335_690075 NZ_CAJZAO010000348.1 Protein Homology CDS 69316 70326 . + 0 ID=cds-WP_124259759.1;Parent=gene-LDO50_RS25615;Dbxref=GenBank:WP_124259759.1;Name=WP_124259759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754590.1;locus_tag=LDO50_RS25615;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_124259759.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 70528 71373 . - . ID=gene-LDO50_RS25620;Name=LDO50_RS25620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25620;old_locus_tag=BVI1335_690076 NZ_CAJZAO010000348.1 Protein Homology CDS 70528 71373 . - 0 ID=cds-WP_014723501.1;Parent=gene-LDO50_RS25620;Dbxref=GenBank:WP_014723501.1;Name=WP_014723501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398516.1;locus_tag=LDO50_RS25620;product=aldo/keto reductase;protein_id=WP_014723501.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 71531 72277 . + . ID=gene-LDO50_RS25625;Name=LDO50_RS25625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25625;old_locus_tag=BVI1335_690077 NZ_CAJZAO010000348.1 Protein Homology CDS 71531 72277 . + 0 ID=cds-WP_034192708.1;Parent=gene-LDO50_RS25625;Dbxref=GenBank:WP_034192708.1;Name=WP_034192708.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185897.1;locus_tag=LDO50_RS25625;product=GntR family transcriptional regulator;protein_id=WP_034192708.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 72299 73690 . - . ID=gene-LDO50_RS25630;Name=LDO50_RS25630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25630;old_locus_tag=BVI1335_690078 NZ_CAJZAO010000348.1 Protein Homology CDS 72299 73690 . - 0 ID=cds-WP_059894217.1;Parent=gene-LDO50_RS25630;Dbxref=GenBank:WP_059894217.1;Name=WP_059894217.1;Ontology_term=GO:0003824,GO:0008410;gbkey=CDS;go_function=catalytic activity|0003824||IEA,CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755663.1;locus_tag=LDO50_RS25630;product=CoA transferase;protein_id=WP_059894217.1;transl_table=11 NZ_CAJZAO010000348.1 RefSeq gene 73829 74306 . + . ID=gene-LDO50_RS25635;Name=LDO50_RS25635;end_range=74306,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25635;partial=true NZ_CAJZAO010000348.1 Protein Homology CDS 73829 74306 . + 0 ID=cds-WP_224020241.1;Parent=gene-LDO50_RS25635;Dbxref=GenBank:WP_224020241.1;Name=WP_224020241.1;Ontology_term=GO:0006355,GO:0003677;end_range=74306,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896256.1;locus_tag=LDO50_RS25635;partial=true;product=MerR family transcriptional regulator;protein_id=WP_224020241.1;transl_table=11 ##sequence-region NZ_CAJZAO010000349.1 1 206071 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000349.1 RefSeq region 1 206071 . + . ID=NZ_CAJZAO010000349.1:1..206071;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_7 NZ_CAJZAO010000349.1 RefSeq gene 334 3198 . + . ID=gene-LDO50_RS25640;Name=LDO50_RS25640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25640;old_locus_tag=BVI1335_70001 NZ_CAJZAO010000349.1 Protein Homology CDS 334 3198 . + 0 ID=cds-WP_011884602.1;Parent=gene-LDO50_RS25640;Dbxref=GenBank:WP_011884602.1;Name=WP_011884602.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526855.1;locus_tag=LDO50_RS25640;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_011884602.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 3334 4611 . + . ID=gene-LDO50_RS25645;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=LDO50_RS25645;old_locus_tag=BVI1335_70002 NZ_CAJZAO010000349.1 Protein Homology CDS 3334 4611 . + 0 ID=cds-WP_011884604.1;Parent=gene-LDO50_RS25645;Dbxref=GenBank:WP_011884604.1;Name=WP_011884604.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601426.1;locus_tag=LDO50_RS25645;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_011884604.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 4693 6123 . + . ID=gene-LDO50_RS25650;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=LDO50_RS25650;old_locus_tag=BVI1335_70003 NZ_CAJZAO010000349.1 Protein Homology CDS 4693 6123 . + 0 ID=cds-WP_011884605.1;Parent=gene-LDO50_RS25650;Dbxref=GenBank:WP_011884605.1;Name=WP_011884605.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884605.1;locus_tag=LDO50_RS25650;product=dihydrolipoyl dehydrogenase;protein_id=WP_011884605.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 6223 7320 . + . ID=gene-LDO50_RS25655;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=LDO50_RS25655;old_locus_tag=BVI1335_70004 NZ_CAJZAO010000349.1 Protein Homology CDS 6223 7320 . + 0 ID=cds-WP_014722933.1;Parent=gene-LDO50_RS25655;Dbxref=GenBank:WP_014722933.1;Name=WP_014722933.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011402415.1;locus_tag=LDO50_RS25655;product=cell division protein ZapE;protein_id=WP_014722933.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 7463 7876 . + . ID=gene-LDO50_RS25660;Name=LDO50_RS25660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25660;old_locus_tag=BVI1335_70005 NZ_CAJZAO010000349.1 Protein Homology CDS 7463 7876 . + 0 ID=cds-WP_014722934.1;Parent=gene-LDO50_RS25660;Dbxref=GenBank:WP_014722934.1;Name=WP_014722934.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: protein motif:HMM:NF024736.6;locus_tag=LDO50_RS25660;product=transposase;protein_id=WP_014722934.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 7977 8438 . - . ID=gene-LDO50_RS25665;Name=LDO50_RS25665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25665;old_locus_tag=BVI1335_70006 NZ_CAJZAO010000349.1 Protein Homology CDS 7977 8438 . - 0 ID=cds-WP_011884608.1;Parent=gene-LDO50_RS25665;Dbxref=GenBank:WP_011884608.1;Name=WP_011884608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526860.1;locus_tag=LDO50_RS25665;product=DUF2147 domain-containing protein;protein_id=WP_011884608.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 8605 10290 . - . ID=gene-LDO50_RS25670;Name=LDO50_RS25670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25670;old_locus_tag=BVI1335_70007 NZ_CAJZAO010000349.1 Protein Homology CDS 8605 10290 . - 0 ID=cds-WP_059461913.1;Parent=gene-LDO50_RS25670;Dbxref=GenBank:WP_059461913.1;Name=WP_059461913.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363752.1;locus_tag=LDO50_RS25670;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_059461913.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 10435 11787 . - . ID=gene-LDO50_RS25675;Name=LDO50_RS25675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25675;old_locus_tag=BVI1335_70008 NZ_CAJZAO010000349.1 Protein Homology CDS 10435 11787 . - 0 ID=cds-WP_059461912.1;Parent=gene-LDO50_RS25675;Dbxref=GenBank:WP_059461912.1;Name=WP_059461912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400310.1;locus_tag=LDO50_RS25675;product=collagen-like triple helix repeat-containing protein;protein_id=WP_059461912.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 11829 13268 . - . ID=gene-LDO50_RS25680;Name=LDO50_RS25680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25680;old_locus_tag=BVI1335_70009 NZ_CAJZAO010000349.1 Protein Homology CDS 11829 13268 . - 0 ID=cds-WP_212172461.1;Parent=gene-LDO50_RS25680;Dbxref=GenBank:WP_212172461.1;Name=WP_212172461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363754.1;locus_tag=LDO50_RS25680;product=collagen-like triple helix repeat-containing protein;protein_id=WP_212172461.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 13245 13469 . + . ID=gene-LDO50_RS25685;Name=LDO50_RS25685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25685 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 13245 13469 . + 0 ID=cds-WP_014722940.1;Parent=gene-LDO50_RS25685;Dbxref=GenBank:WP_014722940.1;Name=WP_014722940.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS25685;product=hypothetical protein;protein_id=WP_014722940.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 13930 14139 . + . ID=gene-LDO50_RS25690;Name=LDO50_RS25690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25690;old_locus_tag=BVI1335_70012 NZ_CAJZAO010000349.1 Protein Homology CDS 13930 14139 . + 0 ID=cds-WP_059461910.1;Parent=gene-LDO50_RS25690;Dbxref=GenBank:WP_059461910.1;Name=WP_059461910.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897201.1;locus_tag=LDO50_RS25690;product=Flp family type IVb pilin;protein_id=WP_059461910.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 14228 14728 . + . ID=gene-LDO50_RS25695;Name=LDO50_RS25695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25695;old_locus_tag=BVI1335_70013 NZ_CAJZAO010000349.1 Protein Homology CDS 14228 14728 . + 0 ID=cds-WP_011884613.1;Parent=gene-LDO50_RS25695;Dbxref=GenBank:WP_011884613.1;Name=WP_011884613.1;Ontology_term=GO:0006508,GO:0004190;gbkey=CDS;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884613.1;locus_tag=LDO50_RS25695;product=A24 family peptidase;protein_id=WP_011884613.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 14725 15168 . + . ID=gene-LDO50_RS25700;Name=LDO50_RS25700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25700;old_locus_tag=BVI1335_70014 NZ_CAJZAO010000349.1 Protein Homology CDS 14725 15168 . + 0 ID=cds-WP_011884614.1;Parent=gene-LDO50_RS25700;Dbxref=GenBank:WP_011884614.1;Name=WP_011884614.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884614.1;locus_tag=LDO50_RS25700;product=TadE/TadG family type IV pilus assembly protein;protein_id=WP_011884614.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 15261 16205 . + . ID=gene-LDO50_RS25705;Name=cpaB;gbkey=Gene;gene=cpaB;gene_biotype=protein_coding;locus_tag=LDO50_RS25705;old_locus_tag=BVI1335_70015 NZ_CAJZAO010000349.1 Protein Homology CDS 15261 16205 . + 0 ID=cds-WP_059461909.1;Parent=gene-LDO50_RS25705;Dbxref=GenBank:WP_059461909.1;Name=WP_059461909.1;gbkey=CDS;gene=cpaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400303.1;locus_tag=LDO50_RS25705;product=Flp pilus assembly protein CpaB;protein_id=WP_059461909.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 16270 17601 . + . ID=gene-LDO50_RS25710;Name=LDO50_RS25710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25710;old_locus_tag=BVI1335_70016 NZ_CAJZAO010000349.1 Protein Homology CDS 16270 17601 . + 0 ID=cds-WP_059454414.1;Parent=gene-LDO50_RS25710;Dbxref=GenBank:WP_059454414.1;Name=WP_059454414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891455.1;locus_tag=LDO50_RS25710;product=type II and III secretion system protein family protein;protein_id=WP_059454414.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 17662 18936 . + . ID=gene-LDO50_RS25715;Name=LDO50_RS25715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25715;old_locus_tag=BVI1335_70017 NZ_CAJZAO010000349.1 Protein Homology CDS 17662 18936 . + 0 ID=cds-WP_011884619.1;Parent=gene-LDO50_RS25715;Dbxref=GenBank:WP_011884619.1;Name=WP_011884619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891453.1;locus_tag=LDO50_RS25715;product=fimbrial protein;protein_id=WP_011884619.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 18940 20304 . + . ID=gene-LDO50_RS25720;Name=LDO50_RS25720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25720;old_locus_tag=BVI1335_70018 NZ_CAJZAO010000349.1 Protein Homology CDS 18940 20304 . + 0 ID=cds-WP_034195570.1;Parent=gene-LDO50_RS25720;Dbxref=GenBank:WP_034195570.1;Name=WP_034195570.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213456.1;locus_tag=LDO50_RS25720;product=CpaF family protein;protein_id=WP_034195570.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 20297 21283 . + . ID=gene-LDO50_RS25725;Name=LDO50_RS25725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25725;old_locus_tag=BVI1335_70019 NZ_CAJZAO010000349.1 Protein Homology CDS 20297 21283 . + 0 ID=cds-WP_059548884.1;Parent=gene-LDO50_RS25725;Dbxref=GenBank:WP_059548884.1;Name=WP_059548884.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526866.1;locus_tag=LDO50_RS25725;product=type II secretion system F family protein;protein_id=WP_059548884.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 21288 22280 . + . ID=gene-LDO50_RS25730;Name=LDO50_RS25730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25730;old_locus_tag=BVI1335_70020 NZ_CAJZAO010000349.1 Protein Homology CDS 21288 22280 . + 0 ID=cds-WP_059561051.1;Parent=gene-LDO50_RS25730;Dbxref=GenBank:WP_059561051.1;Name=WP_059561051.1;Ontology_term=GO:0015628,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416976.1;locus_tag=LDO50_RS25730;product=type II secretion system F family protein;protein_id=WP_059561051.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 22299 23141 . + . ID=gene-LDO50_RS25735;Name=LDO50_RS25735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25735;old_locus_tag=BVI1335_70021 NZ_CAJZAO010000349.1 Protein Homology CDS 22299 23141 . + 0 ID=cds-WP_059561047.1;Parent=gene-LDO50_RS25735;Dbxref=GenBank:WP_059561047.1;Name=WP_059561047.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761822.1;locus_tag=LDO50_RS25735;product=tetratricopeptide repeat protein;protein_id=WP_059561047.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 23162 23491 . + . ID=gene-LDO50_RS25740;Name=LDO50_RS25740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25740;old_locus_tag=BVI1335_70022 NZ_CAJZAO010000349.1 Protein Homology CDS 23162 23491 . + 0 ID=cds-WP_059561071.1;Parent=gene-LDO50_RS25740;Dbxref=GenBank:WP_059561071.1;Name=WP_059561071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884628.1;locus_tag=LDO50_RS25740;product=DUF3613 domain-containing protein;protein_id=WP_059561071.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 23502 25508 . + . ID=gene-LDO50_RS25745;Name=LDO50_RS25745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25745;old_locus_tag=BVI1335_70023 NZ_CAJZAO010000349.1 Protein Homology CDS 23502 25508 . + 0 ID=cds-WP_224020390.1;Parent=gene-LDO50_RS25745;Dbxref=GenBank:WP_224020390.1;Name=WP_224020390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416975.1;locus_tag=LDO50_RS25745;product=pilus assembly protein TadG-related protein;protein_id=WP_224020390.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 25618 27009 . + . ID=gene-LDO50_RS25750;Name=LDO50_RS25750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25750;old_locus_tag=BVI1335_70024 NZ_CAJZAO010000349.1 Protein Homology CDS 25618 27009 . + 0 ID=cds-WP_011884633.1;Parent=gene-LDO50_RS25750;Dbxref=GenBank:WP_011884633.1;Name=WP_011884633.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026562.1;locus_tag=LDO50_RS25750;product=sigma 54-interacting transcriptional regulator;protein_id=WP_011884633.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq pseudogene 27064 27752 . + . ID=gene-LDO50_RS25755;Name=LDO50_RS25755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS25755;old_locus_tag=BVI1335_70025;pseudo=true NZ_CAJZAO010000349.1 Protein Homology CDS 27064 27752 . + 0 ID=cds-LDO50_RS25755;Parent=gene-LDO50_RS25755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753912.1;locus_tag=LDO50_RS25755;product=DUF2968 domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 27836 28402 . - . ID=gene-LDO50_RS25760;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=LDO50_RS25760;old_locus_tag=BVI1335_70026 NZ_CAJZAO010000349.1 Protein Homology CDS 27836 28402 . - 0 ID=cds-WP_176321781.1;Parent=gene-LDO50_RS25760;Dbxref=GenBank:WP_176321781.1;Name=WP_176321781.1;Ontology_term=GO:0016070,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545286.1;locus_tag=LDO50_RS25760;product=RNA chaperone Hfq;protein_id=WP_176321781.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 28663 28803 . + . ID=gene-LDO50_RS25765;Name=LDO50_RS25765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25765;old_locus_tag=BVI1335_70027 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 28663 28803 . + 0 ID=cds-WP_224020391.1;Parent=gene-LDO50_RS25765;Dbxref=GenBank:WP_224020391.1;Name=WP_224020391.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS25765;product=hypothetical protein;protein_id=WP_224020391.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 28834 29751 . - . ID=gene-LDO50_RS25770;Name=LDO50_RS25770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25770;old_locus_tag=BVI1335_70028 NZ_CAJZAO010000349.1 Protein Homology CDS 28834 29751 . - 0 ID=cds-WP_045579144.1;Parent=gene-LDO50_RS25770;Dbxref=GenBank:WP_045579144.1;Name=WP_045579144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485282.1;locus_tag=LDO50_RS25770;product=DUF1571 domain-containing protein;protein_id=WP_045579144.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 29781 31535 . - . ID=gene-LDO50_RS25775;Name=LDO50_RS25775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25775;old_locus_tag=BVI1335_70029 NZ_CAJZAO010000349.1 Protein Homology CDS 29781 31535 . - 0 ID=cds-WP_059461907.1;Parent=gene-LDO50_RS25775;Dbxref=GenBank:WP_059461907.1;Name=WP_059461907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722951.1;locus_tag=LDO50_RS25775;product=AMP-binding protein;protein_id=WP_059461907.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 31806 32624 . - . ID=gene-LDO50_RS25780;Name=LDO50_RS25780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25780;old_locus_tag=BVI1335_70030 NZ_CAJZAO010000349.1 Protein Homology CDS 31806 32624 . - 0 ID=cds-WP_011884645.1;Parent=gene-LDO50_RS25780;Dbxref=GenBank:WP_011884645.1;Name=WP_011884645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884645.1;locus_tag=LDO50_RS25780;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011884645.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 32841 34061 . - . ID=gene-LDO50_RS25785;Name=LDO50_RS25785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25785;old_locus_tag=BVI1335_70031 NZ_CAJZAO010000349.1 Protein Homology CDS 32841 34061 . - 0 ID=cds-WP_014722954.1;Parent=gene-LDO50_RS25785;Dbxref=GenBank:WP_014722954.1;Name=WP_014722954.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545290.1;locus_tag=LDO50_RS25785;product=MFS transporter;protein_id=WP_014722954.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 34330 34872 . + . ID=gene-LDO50_RS25790;Name=LDO50_RS25790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25790;old_locus_tag=BVI1335_70032 NZ_CAJZAO010000349.1 Protein Homology CDS 34330 34872 . + 0 ID=cds-WP_041493958.1;Parent=gene-LDO50_RS25790;Dbxref=GenBank:WP_041493958.1;Name=WP_041493958.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884647.1;locus_tag=LDO50_RS25790;product=GNAT family N-acetyltransferase;protein_id=WP_041493958.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 34984 35610 . + . ID=gene-LDO50_RS25795;Name=LDO50_RS25795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25795;old_locus_tag=BVI1335_70033 NZ_CAJZAO010000349.1 Protein Homology CDS 34984 35610 . + 0 ID=cds-WP_224020243.1;Parent=gene-LDO50_RS25795;Dbxref=GenBank:WP_224020243.1;Name=WP_224020243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416550.1;locus_tag=LDO50_RS25795;product=ParB-like protein;protein_id=WP_224020243.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 35649 37367 . + . ID=gene-LDO50_RS25800;Name=LDO50_RS25800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25800;old_locus_tag=BVI1335_70034 NZ_CAJZAO010000349.1 Protein Homology CDS 35649 37367 . + 0 ID=cds-WP_011884651.1;Parent=gene-LDO50_RS25800;Dbxref=GenBank:WP_011884651.1;Name=WP_011884651.1;Ontology_term=GO:0015103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=inorganic anion transmembrane transporter activity|0015103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884651.1;locus_tag=LDO50_RS25800;product=SulP family inorganic anion transporter;protein_id=WP_011884651.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 37693 38637 . - . ID=gene-LDO50_RS25805;Name=LDO50_RS25805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25805;old_locus_tag=BVI1335_70035 NZ_CAJZAO010000349.1 Protein Homology CDS 37693 38637 . - 0 ID=cds-WP_011884652.1;Parent=gene-LDO50_RS25805;Dbxref=GenBank:WP_011884652.1;Name=WP_011884652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545295.1;locus_tag=LDO50_RS25805;product=ABC transporter substrate-binding protein;protein_id=WP_011884652.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 38720 39757 . - . ID=gene-LDO50_RS25810;Name=LDO50_RS25810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25810;old_locus_tag=BVI1335_70036 NZ_CAJZAO010000349.1 Protein Homology CDS 38720 39757 . - 0 ID=cds-WP_011884653.1;Parent=gene-LDO50_RS25810;Dbxref=GenBank:WP_011884653.1;Name=WP_011884653.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410134.1;locus_tag=LDO50_RS25810;product=ABC transporter permease subunit;protein_id=WP_011884653.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 39796 41207 . - . ID=gene-LDO50_RS25815;Name=LDO50_RS25815;end_range=41207,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25815;old_locus_tag=BVI1335_70037;partial=true NZ_CAJZAO010000349.1 Protein Homology CDS 39796 41207 . - 2 ID=cds-WP_443797871.1;Parent=gene-LDO50_RS25815;Dbxref=GenBank:WP_443797871.1;Name=WP_443797871.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;end_range=41207,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545297.1;locus_tag=LDO50_RS25815;partial=true;product=sugar ABC transporter ATP-binding protein;protein_id=WP_443797871.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 41344 42591 . - . ID=gene-LDO50_RS25820;Name=LDO50_RS25820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25820;old_locus_tag=BVI1335_70039 NZ_CAJZAO010000349.1 Protein Homology CDS 41344 42591 . - 0 ID=cds-WP_045579474.1;Parent=gene-LDO50_RS25820;Dbxref=GenBank:WP_045579474.1;Name=WP_045579474.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554715.1;locus_tag=LDO50_RS25820;product=ROK family protein;protein_id=WP_045579474.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 43074 43160 . - . ID=gene-LDO50_RS25825;Name=LDO50_RS25825;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS25825;old_locus_tag=BVI1335_TRNA47 NZ_CAJZAO010000349.1 tRNAscan-SE tRNA 43074 43160 . - . ID=rna-LDO50_RS25825;Parent=gene-LDO50_RS25825;anticodon=(pos:complement(43124..43126));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS25825;product=tRNA-Leu NZ_CAJZAO010000349.1 tRNAscan-SE exon 43074 43160 . - . ID=exon-LDO50_RS25825-1;Parent=rna-LDO50_RS25825;anticodon=(pos:complement(43124..43126));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS25825;product=tRNA-Leu NZ_CAJZAO010000349.1 RefSeq gene 43190 43385 . - . ID=gene-LDO50_RS32060;Name=LDO50_RS32060;end_range=43385,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS32060;partial=true NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 43190 43385 . - 1 ID=cds-WP_435520934.1;Parent=gene-LDO50_RS32060;Dbxref=GenBank:WP_435520934.1;Name=WP_435520934.1;end_range=43385,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS32060;partial=true;product=hypothetical protein;protein_id=WP_435520934.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 43658 46141 . + . ID=gene-LDO50_RS25830;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=LDO50_RS25830;old_locus_tag=BVI1335_70042 NZ_CAJZAO010000349.1 Protein Homology CDS 43658 46141 . + 0 ID=cds-WP_011884656.1;Parent=gene-LDO50_RS25830;Dbxref=GenBank:WP_011884656.1;Name=WP_011884656.1;Ontology_term=GO:0003723,GO:0004518;gbkey=CDS;gene=rnr;go_function=RNA binding|0003723||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404898.1;locus_tag=LDO50_RS25830;product=ribonuclease R;protein_id=WP_011884656.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 46291 47034 . + . ID=gene-LDO50_RS25835;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=LDO50_RS25835;old_locus_tag=BVI1335_70043 NZ_CAJZAO010000349.1 Protein Homology CDS 46291 47034 . + 0 ID=cds-WP_011884657.1;Parent=gene-LDO50_RS25835;Dbxref=GenBank:WP_011884657.1;Name=WP_011884657.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884657.1;locus_tag=LDO50_RS25835;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_011884657.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 47166 47996 . + . ID=gene-LDO50_RS25840;Name=LDO50_RS25840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25840;old_locus_tag=BVI1335_70044 NZ_CAJZAO010000349.1 Protein Homology CDS 47166 47996 . + 0 ID=cds-WP_059476066.1;Parent=gene-LDO50_RS25840;Dbxref=GenBank:WP_059476066.1;Name=WP_059476066.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476120.1;locus_tag=LDO50_RS25840;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_059476066.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 48086 48778 . + . ID=gene-LDO50_RS25845;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=LDO50_RS25845;old_locus_tag=BVI1335_70045 NZ_CAJZAO010000349.1 Protein Homology CDS 48086 48778 . + 0 ID=cds-WP_011884660.1;Parent=gene-LDO50_RS25845;Dbxref=GenBank:WP_011884660.1;Name=WP_011884660.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884660.1;locus_tag=LDO50_RS25845;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_011884660.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 49061 49777 . + . ID=gene-LDO50_RS25850;Name=LDO50_RS25850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25850;old_locus_tag=BVI1335_70046 NZ_CAJZAO010000349.1 Protein Homology CDS 49061 49777 . + 0 ID=cds-WP_011884662.1;Parent=gene-LDO50_RS25850;Dbxref=GenBank:WP_011884662.1;Name=WP_011884662.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884662.1;locus_tag=LDO50_RS25850;product=FadR/GntR family transcriptional regulator;protein_id=WP_011884662.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 49875 50861 . + . ID=gene-LDO50_RS25855;Name=LDO50_RS25855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25855;old_locus_tag=BVI1335_70047 NZ_CAJZAO010000349.1 Protein Homology CDS 49875 50861 . + 0 ID=cds-WP_034193173.1;Parent=gene-LDO50_RS25855;Dbxref=GenBank:WP_034193173.1;Name=WP_034193173.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758017.1;locus_tag=LDO50_RS25855;product=Gfo/Idh/MocA family protein;protein_id=WP_034193173.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 50908 51600 . - . ID=gene-LDO50_RS25860;Name=LDO50_RS25860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25860;old_locus_tag=BVI1335_70048 NZ_CAJZAO010000349.1 Protein Homology CDS 50908 51600 . - 0 ID=cds-WP_041493821.1;Parent=gene-LDO50_RS25860;Dbxref=GenBank:WP_041493821.1;Name=WP_041493821.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521640.1;locus_tag=LDO50_RS25860;product=amino acid ABC transporter permease;protein_id=WP_041493821.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 51723 52517 . - . ID=gene-LDO50_RS25865;Name=LDO50_RS25865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25865;old_locus_tag=BVI1335_70049 NZ_CAJZAO010000349.1 Protein Homology CDS 51723 52517 . - 0 ID=cds-WP_011884668.1;Parent=gene-LDO50_RS25865;Dbxref=GenBank:WP_011884668.1;Name=WP_011884668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884668.1;locus_tag=LDO50_RS25865;product=cystine ABC transporter substrate-binding protein;protein_id=WP_011884668.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 52617 53654 . - . ID=gene-LDO50_RS25870;Name=LDO50_RS25870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25870;old_locus_tag=BVI1335_70050 NZ_CAJZAO010000349.1 Protein Homology CDS 52617 53654 . - 0 ID=cds-WP_034193041.1;Parent=gene-LDO50_RS25870;Dbxref=GenBank:WP_034193041.1;Name=WP_034193041.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400200.1;locus_tag=LDO50_RS25870;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_034193041.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 53814 54644 . - . ID=gene-LDO50_RS25875;Name=LDO50_RS25875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25875;old_locus_tag=BVI1335_70051 NZ_CAJZAO010000349.1 Protein Homology CDS 53814 54644 . - 0 ID=cds-WP_011884672.1;Parent=gene-LDO50_RS25875;Dbxref=GenBank:WP_011884672.1;Name=WP_011884672.1;Ontology_term=GO:0016598,GO:0004057;gbkey=CDS;go_function=arginyl-tRNA--protein transferase activity|0004057||IEA;go_process=protein arginylation|0016598||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897163.1;locus_tag=LDO50_RS25875;product=arginyltransferase;protein_id=WP_011884672.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq pseudogene 54678 54869 . - . ID=gene-LDO50_RS25880;Name=LDO50_RS25880;end_range=54869,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS25880;old_locus_tag=BVI1335_70052;partial=true;pseudo=true NZ_CAJZAO010000349.1 Protein Homology CDS 54678 54869 . - 0 ID=cds-LDO50_RS25880;Parent=gene-LDO50_RS25880;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=54869,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414405.1;locus_tag=LDO50_RS25880;partial=true;product=leucyl/phenylalanyl-tRNA--protein transferase;pseudo=true;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 54993 56237 . + . ID=gene-LDO50_RS25885;Name=LDO50_RS25885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25885;old_locus_tag=BVI1335_70053 NZ_CAJZAO010000349.1 Protein Homology CDS 54993 56237 . + 0 ID=cds-WP_224020244.1;Parent=gene-LDO50_RS25885;Dbxref=GenBank:WP_224020244.1;Name=WP_224020244.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.6;locus_tag=LDO50_RS25885;product=tyrosine-type recombinase/integrase;protein_id=WP_224020244.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 56275 56718 . + . ID=gene-LDO50_RS25890;Name=LDO50_RS25890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25890;old_locus_tag=BVI1335_70054 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 56275 56718 . + 0 ID=cds-WP_224020245.1;Parent=gene-LDO50_RS25890;Dbxref=GenBank:WP_224020245.1;Name=WP_224020245.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS25890;product=hypothetical protein;protein_id=WP_224020245.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 56960 58135 . + . ID=gene-LDO50_RS25895;Name=LDO50_RS25895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25895;old_locus_tag=BVI1335_70055 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 56960 58135 . + 0 ID=cds-WP_224020246.1;Parent=gene-LDO50_RS25895;Dbxref=GenBank:WP_224020246.1;Name=WP_224020246.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS25895;product=hypothetical protein;protein_id=WP_224020246.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 58444 59097 . + . ID=gene-LDO50_RS25900;Name=LDO50_RS25900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25900;old_locus_tag=BVI1335_70056 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 58444 59097 . + 0 ID=cds-WP_224020247.1;Parent=gene-LDO50_RS25900;Dbxref=GenBank:WP_224020247.1;Name=WP_224020247.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS25900;product=hypothetical protein;protein_id=WP_224020247.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 59094 59375 . + . ID=gene-LDO50_RS25905;Name=LDO50_RS25905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25905;old_locus_tag=BVI1335_70057 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 59094 59375 . + 0 ID=cds-WP_224020248.1;Parent=gene-LDO50_RS25905;Dbxref=GenBank:WP_224020248.1;Name=WP_224020248.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS25905;product=hypothetical protein;protein_id=WP_224020248.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 59446 59997 . + . ID=gene-LDO50_RS25910;Name=LDO50_RS25910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25910;old_locus_tag=BVI1335_70058 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 59446 59997 . + 0 ID=cds-WP_224020249.1;Parent=gene-LDO50_RS25910;Dbxref=GenBank:WP_224020249.1;Name=WP_224020249.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS25910;product=hypothetical protein;protein_id=WP_224020249.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 59994 60233 . + . ID=gene-LDO50_RS25915;Name=LDO50_RS25915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25915;old_locus_tag=BVI1335_70059 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 59994 60233 . + 0 ID=cds-WP_224020250.1;Parent=gene-LDO50_RS25915;Dbxref=GenBank:WP_224020250.1;Name=WP_224020250.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS25915;product=hypothetical protein;protein_id=WP_224020250.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 60230 60643 . + . ID=gene-LDO50_RS25920;Name=LDO50_RS25920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25920;old_locus_tag=BVI1335_70060 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 60230 60643 . + 0 ID=cds-WP_224020251.1;Parent=gene-LDO50_RS25920;Dbxref=GenBank:WP_224020251.1;Name=WP_224020251.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS25920;product=hypothetical protein;protein_id=WP_224020251.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 60674 60919 . + . ID=gene-LDO50_RS25925;Name=LDO50_RS25925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25925;old_locus_tag=BVI1335_70061 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 60674 60919 . + 0 ID=cds-WP_224020252.1;Parent=gene-LDO50_RS25925;Dbxref=GenBank:WP_224020252.1;Name=WP_224020252.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS25925;product=hypothetical protein;protein_id=WP_224020252.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 60916 61329 . + . ID=gene-LDO50_RS25930;Name=LDO50_RS25930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25930;old_locus_tag=BVI1335_70062 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 60916 61329 . + 0 ID=cds-WP_224020253.1;Parent=gene-LDO50_RS25930;Dbxref=GenBank:WP_224020253.1;Name=WP_224020253.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS25930;product=hypothetical protein;protein_id=WP_224020253.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 61342 61665 . + . ID=gene-LDO50_RS25935;Name=LDO50_RS25935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25935;old_locus_tag=BVI1335_70063 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 61342 61665 . + 0 ID=cds-WP_224020254.1;Parent=gene-LDO50_RS25935;Dbxref=GenBank:WP_224020254.1;Name=WP_224020254.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS25935;product=hypothetical protein;protein_id=WP_224020254.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 61650 62024 . + . ID=gene-LDO50_RS25940;Name=LDO50_RS25940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25940;old_locus_tag=BVI1335_70064 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 61650 62024 . + 0 ID=cds-WP_224020255.1;Parent=gene-LDO50_RS25940;Dbxref=GenBank:WP_224020255.1;Name=WP_224020255.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS25940;product=hypothetical protein;protein_id=WP_224020255.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 62026 62247 . + . ID=gene-LDO50_RS25945;Name=LDO50_RS25945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25945;old_locus_tag=BVI1335_70065 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 62026 62247 . + 0 ID=cds-WP_224020256.1;Parent=gene-LDO50_RS25945;Dbxref=GenBank:WP_224020256.1;Name=WP_224020256.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS25945;product=hypothetical protein;protein_id=WP_224020256.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 62238 62450 . + . ID=gene-LDO50_RS25950;Name=LDO50_RS25950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25950;old_locus_tag=BVI1335_70067 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 62238 62450 . + 0 ID=cds-WP_224020257.1;Parent=gene-LDO50_RS25950;Dbxref=GenBank:WP_224020257.1;Name=WP_224020257.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS25950;product=hypothetical protein;protein_id=WP_224020257.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 62441 62767 . + . ID=gene-LDO50_RS25955;Name=LDO50_RS25955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25955;old_locus_tag=BVI1335_70066 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 62441 62767 . + 0 ID=cds-WP_224020258.1;Parent=gene-LDO50_RS25955;Dbxref=GenBank:WP_224020258.1;Name=WP_224020258.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS25955;product=hypothetical protein;protein_id=WP_224020258.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 62879 63100 . + . ID=gene-LDO50_RS25960;Name=LDO50_RS25960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25960;old_locus_tag=BVI1335_70068 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 62879 63100 . + 0 ID=cds-WP_224020259.1;Parent=gene-LDO50_RS25960;Dbxref=GenBank:WP_224020259.1;Name=WP_224020259.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS25960;product=hypothetical protein;protein_id=WP_224020259.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 63116 63328 . + . ID=gene-LDO50_RS25965;Name=LDO50_RS25965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25965;old_locus_tag=BVI1335_70069 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 63116 63328 . + 0 ID=cds-WP_224020260.1;Parent=gene-LDO50_RS25965;Dbxref=GenBank:WP_224020260.1;Name=WP_224020260.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS25965;product=hypothetical protein;protein_id=WP_224020260.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 63396 64739 . - . ID=gene-LDO50_RS25970;Name=LDO50_RS25970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25970;old_locus_tag=BVI1335_70070 NZ_CAJZAO010000349.1 Protein Homology CDS 63396 64739 . - 0 ID=cds-WP_224020261.1;Parent=gene-LDO50_RS25970;Dbxref=GenBank:WP_224020261.1;Name=WP_224020261.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019313.6;locus_tag=LDO50_RS25970;product=KAP family P-loop NTPase fold protein;protein_id=WP_224020261.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 65646 66002 . - . ID=gene-LDO50_RS25975;Name=LDO50_RS25975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25975 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 65646 66002 . - 0 ID=cds-WP_224020262.1;Parent=gene-LDO50_RS25975;Dbxref=GenBank:WP_224020262.1;Name=WP_224020262.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS25975;product=hypothetical protein;protein_id=WP_224020262.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 66108 66266 . + . ID=gene-LDO50_RS25980;Name=LDO50_RS25980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25980;old_locus_tag=BVI1335_70075 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 66108 66266 . + 0 ID=cds-WP_224020263.1;Parent=gene-LDO50_RS25980;Dbxref=GenBank:WP_224020263.1;Name=WP_224020263.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS25980;product=hypothetical protein;protein_id=WP_224020263.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 66278 66454 . + . ID=gene-LDO50_RS25985;Name=LDO50_RS25985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25985;old_locus_tag=BVI1335_70076 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 66278 66454 . + 0 ID=cds-WP_224020264.1;Parent=gene-LDO50_RS25985;Dbxref=GenBank:WP_224020264.1;Name=WP_224020264.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS25985;product=hypothetical protein;protein_id=WP_224020264.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 66805 67182 . + . ID=gene-LDO50_RS25990;Name=LDO50_RS25990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25990;old_locus_tag=BVI1335_70078 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 66805 67182 . + 0 ID=cds-WP_224020265.1;Parent=gene-LDO50_RS25990;Dbxref=GenBank:WP_224020265.1;Name=WP_224020265.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS25990;product=hypothetical protein;protein_id=WP_224020265.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 67601 67774 . + . ID=gene-LDO50_RS25995;Name=LDO50_RS25995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS25995;old_locus_tag=BVI1335_70080 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 67601 67774 . + 0 ID=cds-WP_224020266.1;Parent=gene-LDO50_RS25995;Dbxref=GenBank:WP_224020266.1;Name=WP_224020266.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS25995;product=hypothetical protein;protein_id=WP_224020266.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 68317 68988 . + . ID=gene-LDO50_RS26000;Name=LDO50_RS26000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26000;old_locus_tag=BVI1335_70083 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 68317 68988 . + 0 ID=cds-WP_224020267.1;Parent=gene-LDO50_RS26000;Dbxref=GenBank:WP_224020267.1;Name=WP_224020267.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26000;product=hypothetical protein;protein_id=WP_224020267.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 69830 70069 . - . ID=gene-LDO50_RS26005;Name=LDO50_RS26005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26005;old_locus_tag=BVI1335_70085 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 69830 70069 . - 0 ID=cds-WP_224020268.1;Parent=gene-LDO50_RS26005;Dbxref=GenBank:WP_224020268.1;Name=WP_224020268.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26005;product=hypothetical protein;protein_id=WP_224020268.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 70115 70450 . - . ID=gene-LDO50_RS26010;Name=LDO50_RS26010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26010;old_locus_tag=BVI1335_70086 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 70115 70450 . - 0 ID=cds-WP_224020269.1;Parent=gene-LDO50_RS26010;Dbxref=GenBank:WP_224020269.1;Name=WP_224020269.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26010;product=hypothetical protein;protein_id=WP_224020269.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 70466 70981 . - . ID=gene-LDO50_RS26015;Name=LDO50_RS26015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26015;old_locus_tag=BVI1335_70087 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 70466 70981 . - 0 ID=cds-WP_224020270.1;Parent=gene-LDO50_RS26015;Dbxref=GenBank:WP_224020270.1;Name=WP_224020270.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26015;product=hypothetical protein;protein_id=WP_224020270.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 71086 71259 . - . ID=gene-LDO50_RS26020;Name=LDO50_RS26020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26020;old_locus_tag=BVI1335_70088 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 71086 71259 . - 0 ID=cds-WP_224020271.1;Parent=gene-LDO50_RS26020;Dbxref=GenBank:WP_224020271.1;Name=WP_224020271.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26020;product=hypothetical protein;protein_id=WP_224020271.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 71259 72977 . - . ID=gene-LDO50_RS26025;Name=LDO50_RS26025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26025;old_locus_tag=BVI1335_70089 NZ_CAJZAO010000349.1 Protein Homology CDS 71259 72977 . - 0 ID=cds-WP_224020272.1;Parent=gene-LDO50_RS26025;Dbxref=GenBank:WP_224020272.1;Name=WP_224020272.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF016724.6;locus_tag=LDO50_RS26025;product=DEAD/DEAH box helicase;protein_id=WP_224020272.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 73041 73694 . + . ID=gene-LDO50_RS26030;Name=LDO50_RS26030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26030;old_locus_tag=BVI1335_70090 NZ_CAJZAO010000349.1 Protein Homology CDS 73041 73694 . + 0 ID=cds-WP_224020273.1;Parent=gene-LDO50_RS26030;Dbxref=GenBank:WP_224020273.1;Name=WP_224020273.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF014273.7;locus_tag=LDO50_RS26030;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_224020273.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 73691 74179 . + . ID=gene-LDO50_RS26035;Name=LDO50_RS26035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26035;old_locus_tag=BVI1335_70091 NZ_CAJZAO010000349.1 Protein Homology CDS 73691 74179 . + 0 ID=cds-WP_224020274.1;Parent=gene-LDO50_RS26035;Dbxref=GenBank:WP_224020274.1;Name=WP_224020274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015013672.1;locus_tag=LDO50_RS26035;product=DUF2829 domain-containing protein;protein_id=WP_224020274.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 74176 74379 . + . ID=gene-LDO50_RS26040;Name=LDO50_RS26040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26040;old_locus_tag=BVI1335_70092 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 74176 74379 . + 0 ID=cds-WP_224020275.1;Parent=gene-LDO50_RS26040;Dbxref=GenBank:WP_224020275.1;Name=WP_224020275.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26040;product=hypothetical protein;protein_id=WP_224020275.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 74376 75014 . + . ID=gene-LDO50_RS26045;Name=LDO50_RS26045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26045;old_locus_tag=BVI1335_70093 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 74376 75014 . + 0 ID=cds-WP_224020276.1;Parent=gene-LDO50_RS26045;Dbxref=GenBank:WP_224020276.1;Name=WP_224020276.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26045;product=ParB/Srx family N-terminal domain-containing protein;protein_id=WP_224020276.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 75029 75412 . + . ID=gene-LDO50_RS26050;Name=LDO50_RS26050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26050;old_locus_tag=BVI1335_70094 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 75029 75412 . + 0 ID=cds-WP_224020277.1;Parent=gene-LDO50_RS26050;Dbxref=GenBank:WP_224020277.1;Name=WP_224020277.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26050;product=hypothetical protein;protein_id=WP_224020277.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 75409 76125 . + . ID=gene-LDO50_RS26055;Name=LDO50_RS26055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26055;old_locus_tag=BVI1335_70095 NZ_CAJZAO010000349.1 Protein Homology CDS 75409 76125 . + 0 ID=cds-WP_224020278.1;Parent=gene-LDO50_RS26055;Dbxref=GenBank:WP_224020278.1;Name=WP_224020278.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.6;locus_tag=LDO50_RS26055;product=ATP-binding cassette domain-containing protein;protein_id=WP_224020278.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 76125 76454 . + . ID=gene-LDO50_RS26060;Name=LDO50_RS26060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26060;old_locus_tag=BVI1335_70096 NZ_CAJZAO010000349.1 Protein Homology CDS 76125 76454 . + 0 ID=cds-WP_224020279.1;Parent=gene-LDO50_RS26060;Dbxref=GenBank:WP_224020279.1;Name=WP_224020279.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: protein motif:HMM:NF012314.6;locus_tag=LDO50_RS26060;product=thioredoxin family protein;protein_id=WP_224020279.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 76451 77434 . + . ID=gene-LDO50_RS26065;Name=LDO50_RS26065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26065;old_locus_tag=BVI1335_70097 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 76451 77434 . + 0 ID=cds-WP_224020280.1;Parent=gene-LDO50_RS26065;Dbxref=GenBank:WP_224020280.1;Name=WP_224020280.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26065;product=hypothetical protein;protein_id=WP_224020280.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 77431 77847 . + . ID=gene-LDO50_RS26070;Name=LDO50_RS26070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26070;old_locus_tag=BVI1335_70098 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 77431 77847 . + 0 ID=cds-WP_224020281.1;Parent=gene-LDO50_RS26070;Dbxref=GenBank:WP_224020281.1;Name=WP_224020281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26070;product=hypothetical protein;protein_id=WP_224020281.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 78382 79017 . + . ID=gene-LDO50_RS26075;Name=LDO50_RS26075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26075;old_locus_tag=BVI1335_70101 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 78382 79017 . + 0 ID=cds-WP_224020282.1;Parent=gene-LDO50_RS26075;Dbxref=GenBank:WP_224020282.1;Name=WP_224020282.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26075;product=hypothetical protein;protein_id=WP_224020282.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 79004 80299 . + . ID=gene-LDO50_RS26080;Name=LDO50_RS26080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26080;old_locus_tag=BVI1335_70102 NZ_CAJZAO010000349.1 Protein Homology CDS 79004 80299 . + 0 ID=cds-WP_224020283.1;Parent=gene-LDO50_RS26080;Dbxref=GenBank:WP_224020283.1;Name=WP_224020283.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015211.6;locus_tag=LDO50_RS26080;product=terminase large subunit;protein_id=WP_224020283.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 80355 81920 . + . ID=gene-LDO50_RS26085;Name=LDO50_RS26085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26085;old_locus_tag=BVI1335_70103 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 80355 81920 . + 0 ID=cds-WP_224020284.1;Parent=gene-LDO50_RS26085;Dbxref=GenBank:WP_224020284.1;Name=WP_224020284.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26085;product=hypothetical protein;protein_id=WP_224020284.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 82041 82907 . + . ID=gene-LDO50_RS26090;Name=LDO50_RS26090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26090;old_locus_tag=BVI1335_70104 NZ_CAJZAO010000349.1 Protein Homology CDS 82041 82907 . + 0 ID=cds-WP_224020285.1;Parent=gene-LDO50_RS26090;Dbxref=GenBank:WP_224020285.1;Name=WP_224020285.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042491.4;locus_tag=LDO50_RS26090;product=DUF6651 domain-containing protein;protein_id=WP_224020285.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 82994 83896 . + . ID=gene-LDO50_RS26095;Name=LDO50_RS26095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26095;old_locus_tag=BVI1335_70105 NZ_CAJZAO010000349.1 Protein Homology CDS 82994 83896 . + 0 ID=cds-WP_224020286.1;Parent=gene-LDO50_RS26095;Dbxref=GenBank:WP_224020286.1;Name=WP_224020286.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045672.1;locus_tag=LDO50_RS26095;product=major capsid protein;protein_id=WP_224020286.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 83996 84493 . + . ID=gene-LDO50_RS26100;Name=LDO50_RS26100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26100;old_locus_tag=BVI1335_70106 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 83996 84493 . + 0 ID=cds-WP_224020287.1;Parent=gene-LDO50_RS26100;Dbxref=GenBank:WP_224020287.1;Name=WP_224020287.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26100;product=hypothetical protein;protein_id=WP_224020287.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 84497 85285 . + . ID=gene-LDO50_RS26105;Name=LDO50_RS26105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26105;old_locus_tag=BVI1335_70107 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 84497 85285 . + 0 ID=cds-WP_224020288.1;Parent=gene-LDO50_RS26105;Dbxref=GenBank:WP_224020288.1;Name=WP_224020288.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26105;product=hypothetical protein;protein_id=WP_224020288.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 85282 86049 . + . ID=gene-LDO50_RS26110;Name=LDO50_RS26110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26110;old_locus_tag=BVI1335_70108 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 85282 86049 . + 0 ID=cds-WP_224020289.1;Parent=gene-LDO50_RS26110;Dbxref=GenBank:WP_224020289.1;Name=WP_224020289.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26110;product=hypothetical protein;protein_id=WP_224020289.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 86036 86377 . + . ID=gene-LDO50_RS26115;Name=LDO50_RS26115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26115;old_locus_tag=BVI1335_70109 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 86036 86377 . + 0 ID=cds-WP_224020290.1;Parent=gene-LDO50_RS26115;Dbxref=GenBank:WP_224020290.1;Name=WP_224020290.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26115;product=hypothetical protein;protein_id=WP_224020290.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 86368 86829 . + . ID=gene-LDO50_RS26120;Name=LDO50_RS26120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26120;old_locus_tag=BVI1335_70110 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 86368 86829 . + 0 ID=cds-WP_224020291.1;Parent=gene-LDO50_RS26120;Dbxref=GenBank:WP_224020291.1;Name=WP_224020291.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26120;product=hypothetical protein;protein_id=WP_224020291.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 86826 87209 . + . ID=gene-LDO50_RS26125;Name=LDO50_RS26125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26125;old_locus_tag=BVI1335_70111 NZ_CAJZAO010000349.1 Protein Homology CDS 86826 87209 . + 0 ID=cds-WP_224020292.1;Parent=gene-LDO50_RS26125;Dbxref=GenBank:WP_224020292.1;Name=WP_224020292.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024103.6;locus_tag=LDO50_RS26125;product=minor capsid protein;protein_id=WP_224020292.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 87263 88111 . + . ID=gene-LDO50_RS26130;Name=LDO50_RS26130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26130;old_locus_tag=BVI1335_70112 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 87263 88111 . + 0 ID=cds-WP_224020293.1;Parent=gene-LDO50_RS26130;Dbxref=GenBank:WP_224020293.1;Name=WP_224020293.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26130;product=hypothetical protein;protein_id=WP_224020293.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 88195 88566 . + . ID=gene-LDO50_RS26135;Name=LDO50_RS26135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26135;old_locus_tag=BVI1335_70113 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 88195 88566 . + 0 ID=cds-WP_224020294.1;Parent=gene-LDO50_RS26135;Dbxref=GenBank:WP_224020294.1;Name=WP_224020294.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26135;product=hypothetical protein;protein_id=WP_224020294.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 88641 88907 . + . ID=gene-LDO50_RS26140;Name=LDO50_RS26140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26140;old_locus_tag=BVI1335_70114 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 88641 88907 . + 0 ID=cds-WP_224020295.1;Parent=gene-LDO50_RS26140;Dbxref=GenBank:WP_224020295.1;Name=WP_224020295.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26140;product=hypothetical protein;protein_id=WP_224020295.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 88915 93303 . + . ID=gene-LDO50_RS26145;Name=LDO50_RS26145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26145;old_locus_tag=BVI1335_70115 NZ_CAJZAO010000349.1 Protein Homology CDS 88915 93303 . + 0 ID=cds-WP_224020296.1;Parent=gene-LDO50_RS26145;Dbxref=GenBank:WP_224020296.1;Name=WP_224020296.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040129.5;locus_tag=LDO50_RS26145;product=tape measure protein;protein_id=WP_224020296.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 93300 93668 . + . ID=gene-LDO50_RS26150;Name=LDO50_RS26150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26150;old_locus_tag=BVI1335_70116 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 93300 93668 . + 0 ID=cds-WP_224020297.1;Parent=gene-LDO50_RS26150;Dbxref=GenBank:WP_224020297.1;Name=WP_224020297.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26150;product=hypothetical protein;protein_id=WP_224020297.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 93669 94304 . + . ID=gene-LDO50_RS26155;Name=LDO50_RS26155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26155;old_locus_tag=BVI1335_70117 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 93669 94304 . + 0 ID=cds-WP_224020298.1;Parent=gene-LDO50_RS26155;Dbxref=GenBank:WP_224020298.1;Name=WP_224020298.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26155;product=hypothetical protein;protein_id=WP_224020298.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 94317 94703 . + . ID=gene-LDO50_RS26160;Name=LDO50_RS26160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26160;old_locus_tag=BVI1335_70118 NZ_CAJZAO010000349.1 Protein Homology CDS 94317 94703 . + 0 ID=cds-WP_224020299.1;Parent=gene-LDO50_RS26160;Dbxref=GenBank:WP_224020299.1;Name=WP_224020299.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF013073.7;locus_tag=LDO50_RS26160;product=C40 family peptidase;protein_id=WP_224020299.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 94681 99756 . + . ID=gene-LDO50_RS26165;Name=LDO50_RS26165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26165;old_locus_tag=BVI1335_70119 NZ_CAJZAO010000349.1 Protein Homology CDS 94681 99756 . + 0 ID=cds-WP_443797872.1;Parent=gene-LDO50_RS26165;Dbxref=GenBank:WP_443797872.1;Name=WP_443797872.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024939.6;locus_tag=LDO50_RS26165;product=phage tail protein;protein_id=WP_443797872.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 99766 100125 . + . ID=gene-LDO50_RS26170;Name=LDO50_RS26170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26170;old_locus_tag=BVI1335_70120 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 99766 100125 . + 0 ID=cds-WP_224020301.1;Parent=gene-LDO50_RS26170;Dbxref=GenBank:WP_224020301.1;Name=WP_224020301.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26170;product=hypothetical protein;protein_id=WP_224020301.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 100122 100310 . + . ID=gene-LDO50_RS26175;Name=LDO50_RS26175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26175;old_locus_tag=BVI1335_70121 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 100122 100310 . + 0 ID=cds-WP_224020302.1;Parent=gene-LDO50_RS26175;Dbxref=GenBank:WP_224020302.1;Name=WP_224020302.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26175;product=hypothetical protein;protein_id=WP_224020302.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 100389 103493 . + . ID=gene-LDO50_RS26180;Name=LDO50_RS26180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26180;old_locus_tag=BVI1335_70122 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 100389 103493 . + 0 ID=cds-WP_224020303.1;Parent=gene-LDO50_RS26180;Dbxref=GenBank:WP_224020303.1;Name=WP_224020303.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26180;product=hypothetical protein;protein_id=WP_224020303.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 103493 103900 . + . ID=gene-LDO50_RS26185;Name=LDO50_RS26185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26185;old_locus_tag=BVI1335_70123 NZ_CAJZAO010000349.1 Protein Homology CDS 103493 103900 . + 0 ID=cds-WP_224020304.1;Parent=gene-LDO50_RS26185;Dbxref=GenBank:WP_224020304.1;Name=WP_224020304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884301.1;locus_tag=LDO50_RS26185;product=XkdW family protein;protein_id=WP_224020304.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 103945 104277 . + . ID=gene-LDO50_RS26190;Name=LDO50_RS26190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26190;old_locus_tag=BVI1335_70124 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 103945 104277 . + 0 ID=cds-WP_224020305.1;Parent=gene-LDO50_RS26190;Dbxref=GenBank:WP_224020305.1;Name=WP_224020305.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26190;product=hypothetical protein;protein_id=WP_224020305.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 104415 104762 . + . ID=gene-LDO50_RS26195;Name=LDO50_RS26195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26195;old_locus_tag=BVI1335_70125 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 104415 104762 . + 0 ID=cds-WP_224020306.1;Parent=gene-LDO50_RS26195;Dbxref=GenBank:WP_224020306.1;Name=WP_224020306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26195;product=hypothetical protein;protein_id=WP_224020306.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 104774 105316 . + . ID=gene-LDO50_RS26200;Name=LDO50_RS26200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26200;old_locus_tag=BVI1335_70126 NZ_CAJZAO010000349.1 Protein Homology CDS 104774 105316 . + 0 ID=cds-WP_224020307.1;Parent=gene-LDO50_RS26200;Dbxref=GenBank:WP_224020307.1;Name=WP_224020307.1;Ontology_term=GO:0009253,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013105956.1;locus_tag=LDO50_RS26200;product=lysozyme;protein_id=WP_224020307.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 105313 105570 . + . ID=gene-LDO50_RS26205;Name=LDO50_RS26205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26205;old_locus_tag=BVI1335_70127 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 105313 105570 . + 0 ID=cds-WP_224020308.1;Parent=gene-LDO50_RS26205;Dbxref=GenBank:WP_224020308.1;Name=WP_224020308.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26205;product=hypothetical protein;protein_id=WP_224020308.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 105567 106175 . + . ID=gene-LDO50_RS26210;Name=LDO50_RS26210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26210;old_locus_tag=BVI1335_70128 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 105567 106175 . + 0 ID=cds-WP_224020309.1;Parent=gene-LDO50_RS26210;Dbxref=GenBank:WP_224020309.1;Name=WP_224020309.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26210;product=hypothetical protein;protein_id=WP_224020309.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 106227 106964 . + . ID=gene-LDO50_RS26215;Name=LDO50_RS26215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26215;old_locus_tag=BVI1335_70129 NZ_CAJZAO010000349.1 Protein Homology CDS 106227 106964 . + 0 ID=cds-WP_224020310.1;Parent=gene-LDO50_RS26215;Dbxref=GenBank:WP_224020310.1;Name=WP_224020310.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF014605.6;locus_tag=LDO50_RS26215;product=PhoH family protein;protein_id=WP_224020310.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 106961 107209 . + . ID=gene-LDO50_RS26220;Name=LDO50_RS26220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26220;old_locus_tag=BVI1335_70130 NZ_CAJZAO010000349.1 Protein Homology CDS 106961 107209 . + 0 ID=cds-WP_224020311.1;Parent=gene-LDO50_RS26220;Dbxref=GenBank:WP_224020311.1;Name=WP_224020311.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048882.2;locus_tag=LDO50_RS26220;product=Acb2/Tad1 domain-containing protein;protein_id=WP_224020311.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 107433 108068 . + . ID=gene-LDO50_RS26225;Name=LDO50_RS26225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26225;old_locus_tag=BVI1335_70131 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 107433 108068 . + 0 ID=cds-WP_224020312.1;Parent=gene-LDO50_RS26225;Dbxref=GenBank:WP_224020312.1;Name=WP_224020312.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26225;product=hypothetical protein;protein_id=WP_224020312.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 108136 108492 . + . ID=gene-LDO50_RS26230;Name=LDO50_RS26230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26230;old_locus_tag=BVI1335_70132 NZ_CAJZAO010000349.1 Protein Homology CDS 108136 108492 . + 0 ID=cds-WP_224020313.1;Parent=gene-LDO50_RS26230;Dbxref=GenBank:WP_224020313.1;Name=WP_224020313.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF028518.6;locus_tag=LDO50_RS26230;product=RNA chaperone Hfq;protein_id=WP_224020313.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 108786 109886 . + . ID=gene-LDO50_RS26235;Name=LDO50_RS26235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26235;old_locus_tag=BVI1335_70133 NZ_CAJZAO010000349.1 Protein Homology CDS 108786 109886 . + 0 ID=cds-WP_224020314.1;Parent=gene-LDO50_RS26235;Dbxref=GenBank:WP_224020314.1;Name=WP_224020314.1;Ontology_term=GO:0006260,GO:0003678,GO:0005524;gbkey=CDS;go_function=DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:NF015736.6;locus_tag=LDO50_RS26235;product=DnaB-like helicase C-terminal domain-containing protein;protein_id=WP_224020314.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 109896 110999 . + . ID=gene-LDO50_RS26240;Name=LDO50_RS26240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26240;old_locus_tag=BVI1335_70134 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 109896 110999 . + 0 ID=cds-WP_224020315.1;Parent=gene-LDO50_RS26240;Dbxref=GenBank:WP_224020315.1;Name=WP_224020315.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26240;product=hypothetical protein;protein_id=WP_224020315.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 111045 111512 . + . ID=gene-LDO50_RS26245;Name=LDO50_RS26245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26245;old_locus_tag=BVI1335_70135 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 111045 111512 . + 0 ID=cds-WP_224020316.1;Parent=gene-LDO50_RS26245;Dbxref=GenBank:WP_224020316.1;Name=WP_224020316.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26245;product=hypothetical protein;protein_id=WP_224020316.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 111522 112187 . + . ID=gene-LDO50_RS26250;Name=LDO50_RS26250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26250;old_locus_tag=BVI1335_70136 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 111522 112187 . + 0 ID=cds-WP_224020317.1;Parent=gene-LDO50_RS26250;Dbxref=GenBank:WP_224020317.1;Name=WP_224020317.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26250;product=hypothetical protein;protein_id=WP_224020317.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 112207 113607 . + . ID=gene-LDO50_RS26255;Name=LDO50_RS26255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26255;old_locus_tag=BVI1335_70137 NZ_CAJZAO010000349.1 Protein Homology CDS 112207 113607 . + 0 ID=cds-WP_224020318.1;Parent=gene-LDO50_RS26255;Dbxref=GenBank:WP_224020318.1;Name=WP_224020318.1;Ontology_term=GO:0006281,GO:0006310,GO:0003910,GO:0005524;gbkey=CDS;go_function=DNA ligase (ATP) activity|0003910||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF013252.6;locus_tag=LDO50_RS26255;product=ATP-dependent DNA ligase;protein_id=WP_224020318.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 113604 113804 . + . ID=gene-LDO50_RS26260;Name=LDO50_RS26260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26260;old_locus_tag=BVI1335_70138 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 113604 113804 . + 0 ID=cds-WP_224020319.1;Parent=gene-LDO50_RS26260;Dbxref=GenBank:WP_224020319.1;Name=WP_224020319.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26260;product=hypothetical protein;protein_id=WP_224020319.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 113814 114020 . + . ID=gene-LDO50_RS26265;Name=LDO50_RS26265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26265;old_locus_tag=BVI1335_70140 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 113814 114020 . + 0 ID=cds-WP_224020320.1;Parent=gene-LDO50_RS26265;Dbxref=GenBank:WP_224020320.1;Name=WP_224020320.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26265;product=hypothetical protein;protein_id=WP_224020320.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 114017 114358 . + . ID=gene-LDO50_RS26270;Name=LDO50_RS26270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26270;old_locus_tag=BVI1335_70139 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 114017 114358 . + 0 ID=cds-WP_224020321.1;Parent=gene-LDO50_RS26270;Dbxref=GenBank:WP_224020321.1;Name=WP_224020321.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26270;product=hypothetical protein;protein_id=WP_224020321.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 114467 114862 . + . ID=gene-LDO50_RS26275;Name=LDO50_RS26275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26275;old_locus_tag=BVI1335_70141 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 114467 114862 . + 0 ID=cds-WP_224020322.1;Parent=gene-LDO50_RS26275;Dbxref=GenBank:WP_224020322.1;Name=WP_224020322.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26275;product=hypothetical protein;protein_id=WP_224020322.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 114859 115317 . + . ID=gene-LDO50_RS26280;Name=LDO50_RS26280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26280;old_locus_tag=BVI1335_70142 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 114859 115317 . + 0 ID=cds-WP_224020323.1;Parent=gene-LDO50_RS26280;Dbxref=GenBank:WP_224020323.1;Name=WP_224020323.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26280;product=hypothetical protein;protein_id=WP_224020323.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 115327 115476 . + . ID=gene-LDO50_RS26285;Name=LDO50_RS26285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26285 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 115327 115476 . + 0 ID=cds-WP_224020324.1;Parent=gene-LDO50_RS26285;Dbxref=GenBank:WP_224020324.1;Name=WP_224020324.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26285;product=hypothetical protein;protein_id=WP_224020324.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 115599 116063 . - . ID=gene-LDO50_RS26290;Name=LDO50_RS26290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26290;old_locus_tag=BVI1335_70143 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 115599 116063 . - 0 ID=cds-WP_224020325.1;Parent=gene-LDO50_RS26290;Dbxref=GenBank:WP_224020325.1;Name=WP_224020325.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26290;product=hypothetical protein;protein_id=WP_224020325.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 116297 116524 . + . ID=gene-LDO50_RS26295;Name=LDO50_RS26295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26295;old_locus_tag=BVI1335_70145 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 116297 116524 . + 0 ID=cds-WP_224020326.1;Parent=gene-LDO50_RS26295;Dbxref=GenBank:WP_224020326.1;Name=WP_224020326.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26295;product=hypothetical protein;protein_id=WP_224020326.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 116607 118811 . + . ID=gene-LDO50_RS26300;Name=LDO50_RS26300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26300;old_locus_tag=BVI1335_70146 NZ_CAJZAO010000349.1 Protein Homology CDS 116607 118811 . + 0 ID=cds-WP_224020327.1;Parent=gene-LDO50_RS26300;Dbxref=GenBank:WP_224020327.1;Name=WP_224020327.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023203.6;locus_tag=LDO50_RS26300;product=cobaltochelatase CobT-related protein;protein_id=WP_224020327.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 118927 120123 . + . ID=gene-LDO50_RS26305;Name=LDO50_RS26305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26305;old_locus_tag=BVI1335_70147 NZ_CAJZAO010000349.1 Protein Homology CDS 118927 120123 . + 0 ID=cds-WP_224020328.1;Parent=gene-LDO50_RS26305;Dbxref=GenBank:WP_224020328.1;Name=WP_224020328.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF019348.6;locus_tag=LDO50_RS26305;product=AAA family ATPase;protein_id=WP_224020328.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 120135 120788 . + . ID=gene-LDO50_RS26310;Name=LDO50_RS26310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26310;old_locus_tag=BVI1335_70148 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 120135 120788 . + 0 ID=cds-WP_224020329.1;Parent=gene-LDO50_RS26310;Dbxref=GenBank:WP_224020329.1;Name=WP_224020329.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26310;product=hypothetical protein;protein_id=WP_224020329.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 120899 121408 . + . ID=gene-LDO50_RS26315;Name=LDO50_RS26315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26315;old_locus_tag=BVI1335_70149 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 120899 121408 . + 0 ID=cds-WP_224020330.1;Parent=gene-LDO50_RS26315;Dbxref=GenBank:WP_224020330.1;Name=WP_224020330.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26315;product=hypothetical protein;protein_id=WP_224020330.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 121427 124786 . + . ID=gene-LDO50_RS26320;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=LDO50_RS26320;old_locus_tag=BVI1335_70150 NZ_CAJZAO010000349.1 Protein Homology CDS 121427 124786 . + 0 ID=cds-WP_224020331.1;Parent=gene-LDO50_RS26320;Dbxref=GenBank:WP_224020331.1;Name=WP_224020331.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408,GO:0009360;gbkey=CDS;gene=dnaE;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:TIGR00594.1;locus_tag=LDO50_RS26320;product=DNA polymerase III subunit alpha;protein_id=WP_224020331.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 124801 125430 . + . ID=gene-LDO50_RS26325;Name=LDO50_RS26325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26325;old_locus_tag=BVI1335_70151 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 124801 125430 . + 0 ID=cds-WP_224020332.1;Parent=gene-LDO50_RS26325;Dbxref=GenBank:WP_224020332.1;Name=WP_224020332.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26325;product=hypothetical protein;protein_id=WP_224020332.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 125581 126630 . + . ID=gene-LDO50_RS26330;Name=LDO50_RS26330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26330;old_locus_tag=BVI1335_70152 NZ_CAJZAO010000349.1 Protein Homology CDS 125581 126630 . + 0 ID=cds-WP_224020333.1;Parent=gene-LDO50_RS26330;Dbxref=GenBank:WP_224020333.1;Name=WP_224020333.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020383.6;locus_tag=LDO50_RS26330;product=hypothetical protein;protein_id=WP_224020333.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 126693 127742 . + . ID=gene-LDO50_RS26335;Name=LDO50_RS26335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26335;old_locus_tag=BVI1335_70154 NZ_CAJZAO010000349.1 Protein Homology CDS 126693 127742 . + 0 ID=cds-WP_224020334.1;Parent=gene-LDO50_RS26335;Dbxref=GenBank:WP_224020334.1;Name=WP_224020334.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014759.6;locus_tag=LDO50_RS26335;product=hypothetical protein;protein_id=WP_224020334.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 127754 127993 . + . ID=gene-LDO50_RS26340;Name=LDO50_RS26340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26340;old_locus_tag=BVI1335_70155 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 127754 127993 . + 0 ID=cds-WP_224020335.1;Parent=gene-LDO50_RS26340;Dbxref=GenBank:WP_224020335.1;Name=WP_224020335.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26340;product=hypothetical protein;protein_id=WP_224020335.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 127997 129067 . + . ID=gene-LDO50_RS26345;Name=LDO50_RS26345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26345;old_locus_tag=BVI1335_70156 NZ_CAJZAO010000349.1 Protein Homology CDS 127997 129067 . + 0 ID=cds-WP_224020336.1;Parent=gene-LDO50_RS26345;Dbxref=GenBank:WP_224020336.1;Name=WP_224020336.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012381.6;locus_tag=LDO50_RS26345;product=DNA recombination/repair protein RecA;protein_id=WP_224020336.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 129124 129507 . + . ID=gene-LDO50_RS26350;Name=LDO50_RS26350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26350;old_locus_tag=BVI1335_70157 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 129124 129507 . + 0 ID=cds-WP_224020337.1;Parent=gene-LDO50_RS26350;Dbxref=GenBank:WP_224020337.1;Name=WP_224020337.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26350;product=hypothetical protein;protein_id=WP_224020337.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 129479 129775 . + . ID=gene-LDO50_RS26355;Name=LDO50_RS26355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26355;old_locus_tag=BVI1335_70158 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 129479 129775 . + 0 ID=cds-WP_224020338.1;Parent=gene-LDO50_RS26355;Dbxref=GenBank:WP_224020338.1;Name=WP_224020338.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26355;product=hypothetical protein;protein_id=WP_224020338.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 129765 130211 . + . ID=gene-LDO50_RS26360;Name=LDO50_RS26360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26360;old_locus_tag=BVI1335_70159 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 129765 130211 . + 0 ID=cds-WP_224020339.1;Parent=gene-LDO50_RS26360;Dbxref=GenBank:WP_224020339.1;Name=WP_224020339.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26360;product=hypothetical protein;protein_id=WP_224020339.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 130273 130680 . + . ID=gene-LDO50_RS26365;Name=LDO50_RS26365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26365;old_locus_tag=BVI1335_70160 NZ_CAJZAO010000349.1 Protein Homology CDS 130273 130680 . + 0 ID=cds-WP_224020340.1;Parent=gene-LDO50_RS26365;Dbxref=GenBank:WP_224020340.1;Name=WP_224020340.1;Ontology_term=GO:0030435,GO:0071555,GO:0016787,GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_function=hydrolase activity|0016787||IEA;go_process=sporulation resulting in formation of a cellular spore|0030435||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: protein motif:HMM:NF019128.6;locus_tag=LDO50_RS26365;product=cell wall hydrolase;protein_id=WP_224020340.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 130745 131281 . + . ID=gene-LDO50_RS26370;Name=LDO50_RS26370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26370;old_locus_tag=BVI1335_70161 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 130745 131281 . + 0 ID=cds-WP_224020341.1;Parent=gene-LDO50_RS26370;Dbxref=GenBank:WP_224020341.1;Name=WP_224020341.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26370;product=hypothetical protein;protein_id=WP_224020341.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 131385 132452 . + . ID=gene-LDO50_RS26375;Name=LDO50_RS26375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26375;old_locus_tag=BVI1335_70162 NZ_CAJZAO010000349.1 Protein Homology CDS 131385 132452 . + 0 ID=cds-WP_224020342.1;Parent=gene-LDO50_RS26375;Dbxref=GenBank:WP_224020342.1;Name=WP_224020342.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF012376.6;locus_tag=LDO50_RS26375;product=metallophosphoesterase;protein_id=WP_224020342.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 132511 134421 . + . ID=gene-LDO50_RS26380;Name=LDO50_RS26380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26380;old_locus_tag=BVI1335_70163 NZ_CAJZAO010000349.1 Protein Homology CDS 132511 134421 . + 0 ID=cds-WP_224020343.1;Parent=gene-LDO50_RS26380;Dbxref=GenBank:WP_224020343.1;Name=WP_224020343.1;Ontology_term=GO:0006302,GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;go_process=double-strand break repair|0006302||IEA;inference=COORDINATES: protein motif:HMM:NF014516.6;locus_tag=LDO50_RS26380;product=AAA family ATPase;protein_id=WP_224020343.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 134406 135068 . + . ID=gene-LDO50_RS26385;Name=LDO50_RS26385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26385;old_locus_tag=BVI1335_70164 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 134406 135068 . + 0 ID=cds-WP_224020344.1;Parent=gene-LDO50_RS26385;Dbxref=GenBank:WP_224020344.1;Name=WP_224020344.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26385;product=hypothetical protein;protein_id=WP_224020344.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 135074 135370 . + . ID=gene-LDO50_RS26390;Name=LDO50_RS26390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26390;old_locus_tag=BVI1335_70165 NZ_CAJZAO010000349.1 Protein Homology CDS 135074 135370 . + 0 ID=cds-WP_224020345.1;Parent=gene-LDO50_RS26390;Dbxref=GenBank:WP_224020345.1;Name=WP_224020345.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049156.1;locus_tag=LDO50_RS26390;product=DUF7352 domain-containing protein;protein_id=WP_224020345.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 135367 135948 . + . ID=gene-LDO50_RS26395;Name=LDO50_RS26395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26395;old_locus_tag=BVI1335_70166 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 135367 135948 . + 0 ID=cds-WP_224020346.1;Parent=gene-LDO50_RS26395;Dbxref=GenBank:WP_224020346.1;Name=WP_224020346.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26395;product=hypothetical protein;protein_id=WP_224020346.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 135945 137168 . - . ID=gene-LDO50_RS26400;Name=LDO50_RS26400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26400;old_locus_tag=BVI1335_70167 NZ_CAJZAO010000349.1 Protein Homology CDS 135945 137168 . - 0 ID=cds-WP_224020347.1;Parent=gene-LDO50_RS26400;Dbxref=GenBank:WP_224020347.1;Name=WP_224020347.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027613.6;locus_tag=LDO50_RS26400;product=PIN domain-containing protein;protein_id=WP_224020347.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 137352 139586 . + . ID=gene-LDO50_RS26405;Name=LDO50_RS26405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26405;old_locus_tag=BVI1335_70169 NZ_CAJZAO010000349.1 Protein Homology CDS 137352 139586 . + 0 ID=cds-WP_224020348.1;Parent=gene-LDO50_RS26405;Dbxref=GenBank:WP_224020348.1;Name=WP_224020348.1;Ontology_term=GO:0009265,GO:0004748,GO:0005971;gbkey=CDS;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA;inference=COORDINATES: protein motif:HMM:TIGR02506.1;locus_tag=LDO50_RS26405;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_224020348.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 139632 140624 . + . ID=gene-LDO50_RS26410;Name=LDO50_RS26410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26410;old_locus_tag=BVI1335_70170 NZ_CAJZAO010000349.1 Protein Homology CDS 139632 140624 . + 0 ID=cds-WP_224020349.1;Parent=gene-LDO50_RS26410;Dbxref=GenBank:WP_224020349.1;Name=WP_224020349.1;Ontology_term=GO:0006260,GO:0009263,GO:0004748,GO:0046872,GO:0005971;gbkey=CDS;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,metal ion binding|0046872||IEA;go_process=DNA replication|0006260||IEA,deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: protein motif:HMM:NF012490.6;locus_tag=LDO50_RS26410;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_224020349.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 140715 141101 . + . ID=gene-LDO50_RS26415;Name=LDO50_RS26415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26415;old_locus_tag=BVI1335_70171 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 140715 141101 . + 0 ID=cds-WP_224020350.1;Parent=gene-LDO50_RS26415;Dbxref=GenBank:WP_224020350.1;Name=WP_224020350.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26415;product=hypothetical protein;protein_id=WP_224020350.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 141389 141574 . + . ID=gene-LDO50_RS26420;Name=LDO50_RS26420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26420;old_locus_tag=BVI1335_70172 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 141389 141574 . + 0 ID=cds-WP_224020351.1;Parent=gene-LDO50_RS26420;Dbxref=GenBank:WP_224020351.1;Name=WP_224020351.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26420;product=hypothetical protein;protein_id=WP_224020351.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 141585 142514 . + . ID=gene-LDO50_RS26425;Name=LDO50_RS26425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26425;old_locus_tag=BVI1335_70173 NZ_CAJZAO010000349.1 Protein Homology CDS 141585 142514 . + 0 ID=cds-WP_224020352.1;Parent=gene-LDO50_RS26425;Dbxref=GenBank:WP_224020352.1;Name=WP_224020352.1;Ontology_term=GO:0006231,GO:0050660,GO:0050797;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA,thymidylate synthase (FAD) activity|0050797||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016064819.1;locus_tag=LDO50_RS26425;product=FAD-dependent thymidylate synthase;protein_id=WP_224020352.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 142568 143206 . + . ID=gene-LDO50_RS26430;Name=LDO50_RS26430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26430;old_locus_tag=BVI1335_70174 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 142568 143206 . + 0 ID=cds-WP_224020353.1;Parent=gene-LDO50_RS26430;Dbxref=GenBank:WP_224020353.1;Name=WP_224020353.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26430;product=hypothetical protein;protein_id=WP_224020353.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 143203 143391 . + . ID=gene-LDO50_RS26435;Name=LDO50_RS26435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26435;old_locus_tag=BVI1335_70175 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 143203 143391 . + 0 ID=cds-WP_224020354.1;Parent=gene-LDO50_RS26435;Dbxref=GenBank:WP_224020354.1;Name=WP_224020354.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26435;product=hypothetical protein;protein_id=WP_224020354.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 143388 144014 . + . ID=gene-LDO50_RS26440;Name=LDO50_RS26440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26440;old_locus_tag=BVI1335_70176 NZ_CAJZAO010000349.1 Protein Homology CDS 143388 144014 . + 0 ID=cds-WP_224020355.1;Parent=gene-LDO50_RS26440;Dbxref=GenBank:WP_224020355.1;Name=WP_224020355.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024911.6;locus_tag=LDO50_RS26440;product=AAA family ATPase;protein_id=WP_224020355.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 144121 144741 . + . ID=gene-LDO50_RS26445;Name=LDO50_RS26445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26445;old_locus_tag=BVI1335_70178 NZ_CAJZAO010000349.1 Protein Homology CDS 144121 144741 . + 0 ID=cds-WP_224020356.1;Parent=gene-LDO50_RS26445;Dbxref=GenBank:WP_224020356.1;Name=WP_224020356.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037896.6;locus_tag=LDO50_RS26445;product=Nmad5 family putative nucleotide modification protein;protein_id=WP_224020356.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 144738 145154 . + . ID=gene-LDO50_RS26450;Name=LDO50_RS26450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26450;old_locus_tag=BVI1335_70179 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 144738 145154 . + 0 ID=cds-WP_224020357.1;Parent=gene-LDO50_RS26450;Dbxref=GenBank:WP_224020357.1;Name=WP_224020357.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26450;product=hypothetical protein;protein_id=WP_224020357.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 145242 145706 . + . ID=gene-LDO50_RS26455;Name=LDO50_RS26455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26455;old_locus_tag=BVI1335_70180 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 145242 145706 . + 0 ID=cds-WP_224020358.1;Parent=gene-LDO50_RS26455;Dbxref=GenBank:WP_224020358.1;Name=WP_224020358.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26455;product=hypothetical protein;protein_id=WP_224020358.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 145717 145845 . + . ID=gene-LDO50_RS30910;Name=LDO50_RS30910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30910;old_locus_tag=BVI1335_70181 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 145717 145845 . + 0 ID=cds-WP_290370769.1;Parent=gene-LDO50_RS30910;Dbxref=GenBank:WP_290370769.1;Name=WP_290370769.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS30910;product=hypothetical protein;protein_id=WP_290370769.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 145920 146390 . + . ID=gene-LDO50_RS26460;Name=LDO50_RS26460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26460;old_locus_tag=BVI1335_70182 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 145920 146390 . + 0 ID=cds-WP_224020359.1;Parent=gene-LDO50_RS26460;Dbxref=GenBank:WP_224020359.1;Name=WP_224020359.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26460;product=hypothetical protein;protein_id=WP_224020359.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 146535 146939 . + . ID=gene-LDO50_RS26465;Name=LDO50_RS26465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26465;old_locus_tag=BVI1335_70183 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 146535 146939 . + 0 ID=cds-WP_224020360.1;Parent=gene-LDO50_RS26465;Dbxref=GenBank:WP_224020360.1;Name=WP_224020360.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26465;product=hypothetical protein;protein_id=WP_224020360.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 146929 147384 . + . ID=gene-LDO50_RS26470;Name=LDO50_RS26470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26470;old_locus_tag=BVI1335_70184 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 146929 147384 . + 0 ID=cds-WP_224020361.1;Parent=gene-LDO50_RS26470;Dbxref=GenBank:WP_224020361.1;Name=WP_224020361.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26470;product=hypothetical protein;protein_id=WP_224020361.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 147386 147853 . + . ID=gene-LDO50_RS26475;Name=LDO50_RS26475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26475;old_locus_tag=BVI1335_70185 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 147386 147853 . + 0 ID=cds-WP_224020362.1;Parent=gene-LDO50_RS26475;Dbxref=GenBank:WP_224020362.1;Name=WP_224020362.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26475;product=hypothetical protein;protein_id=WP_224020362.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 147850 148017 . + . ID=gene-LDO50_RS32065;Name=LDO50_RS32065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS32065;old_locus_tag=BVI1335_70186 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 147850 148017 . + 0 ID=cds-WP_443797873.1;Parent=gene-LDO50_RS32065;Dbxref=GenBank:WP_443797873.1;Name=WP_443797873.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS32065;product=hypothetical protein;protein_id=WP_443797873.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 148105 148662 . + . ID=gene-LDO50_RS26480;Name=LDO50_RS26480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26480;old_locus_tag=BVI1335_70187 NZ_CAJZAO010000349.1 Protein Homology CDS 148105 148662 . + 0 ID=cds-WP_224020363.1;Parent=gene-LDO50_RS26480;Dbxref=GenBank:WP_224020363.1;Name=WP_224020363.1;Ontology_term=GO:0003677,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: protein motif:HMM:NF013122.7;locus_tag=LDO50_RS26480;product=3'-5' exonuclease;protein_id=WP_224020363.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 148659 149150 . + . ID=gene-LDO50_RS26485;Name=LDO50_RS26485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26485;old_locus_tag=BVI1335_70188 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 148659 149150 . + 0 ID=cds-WP_224020364.1;Parent=gene-LDO50_RS26485;Dbxref=GenBank:WP_224020364.1;Name=WP_224020364.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26485;product=hypothetical protein;protein_id=WP_224020364.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 149178 149732 . + . ID=gene-LDO50_RS26490;Name=LDO50_RS26490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26490;old_locus_tag=BVI1335_70189 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 149178 149732 . + 0 ID=cds-WP_224020365.1;Parent=gene-LDO50_RS26490;Dbxref=GenBank:WP_224020365.1;Name=WP_224020365.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26490;product=hypothetical protein;protein_id=WP_224020365.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 149729 150043 . + . ID=gene-LDO50_RS26495;Name=LDO50_RS26495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26495;old_locus_tag=BVI1335_70190 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 149729 150043 . + 0 ID=cds-WP_224020366.1;Parent=gene-LDO50_RS26495;Dbxref=GenBank:WP_224020366.1;Name=WP_224020366.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26495;product=hypothetical protein;protein_id=WP_224020366.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 150043 150252 . + . ID=gene-LDO50_RS26500;Name=LDO50_RS26500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26500;old_locus_tag=BVI1335_70192 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 150043 150252 . + 0 ID=cds-WP_224020367.1;Parent=gene-LDO50_RS26500;Dbxref=GenBank:WP_224020367.1;Name=WP_224020367.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26500;product=hypothetical protein;protein_id=WP_224020367.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 150243 150947 . + . ID=gene-LDO50_RS26505;Name=LDO50_RS26505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26505;old_locus_tag=BVI1335_70191 NZ_CAJZAO010000349.1 Protein Homology CDS 150243 150947 . + 0 ID=cds-WP_224020368.1;Parent=gene-LDO50_RS26505;Dbxref=GenBank:WP_224020368.1;Name=WP_224020368.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012304.6;locus_tag=LDO50_RS26505;product=ribonuclease HI;protein_id=WP_224020368.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 150961 151125 . + . ID=gene-LDO50_RS26510;Name=LDO50_RS26510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26510 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 150961 151125 . + 0 ID=cds-WP_224020369.1;Parent=gene-LDO50_RS26510;Dbxref=GenBank:WP_224020369.1;Name=WP_224020369.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26510;product=hypothetical protein;protein_id=WP_224020369.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 151162 151356 . + . ID=gene-LDO50_RS26515;Name=LDO50_RS26515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26515;old_locus_tag=BVI1335_70194 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 151162 151356 . + 0 ID=cds-WP_224020370.1;Parent=gene-LDO50_RS26515;Dbxref=GenBank:WP_224020370.1;Name=WP_224020370.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26515;product=hypothetical protein;protein_id=WP_224020370.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 151401 151793 . + . ID=gene-LDO50_RS26520;Name=LDO50_RS26520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26520;old_locus_tag=BVI1335_70195 NZ_CAJZAO010000349.1 Protein Homology CDS 151401 151793 . + 0 ID=cds-WP_224020371.1;Parent=gene-LDO50_RS26520;Dbxref=GenBank:WP_224020371.1;Name=WP_224020371.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022224.6;locus_tag=LDO50_RS26520;product=phage protein NinX family protein;protein_id=WP_224020371.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 151797 152093 . + . ID=gene-LDO50_RS26525;Name=LDO50_RS26525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26525;old_locus_tag=BVI1335_70196 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 151797 152093 . + 0 ID=cds-WP_224020372.1;Parent=gene-LDO50_RS26525;Dbxref=GenBank:WP_224020372.1;Name=WP_224020372.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26525;product=hypothetical protein;protein_id=WP_224020372.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 152090 152359 . + . ID=gene-LDO50_RS26530;Name=LDO50_RS26530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26530;old_locus_tag=BVI1335_70197 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 152090 152359 . + 0 ID=cds-WP_224020373.1;Parent=gene-LDO50_RS26530;Dbxref=GenBank:WP_224020373.1;Name=WP_224020373.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26530;product=hypothetical protein;protein_id=WP_224020373.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 152356 153075 . + . ID=gene-LDO50_RS26535;Name=LDO50_RS26535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26535;old_locus_tag=BVI1335_70198 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 152356 153075 . + 0 ID=cds-WP_224020374.1;Parent=gene-LDO50_RS26535;Dbxref=GenBank:WP_224020374.1;Name=WP_224020374.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26535;product=hypothetical protein;protein_id=WP_224020374.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 153072 154034 . + . ID=gene-LDO50_RS26540;Name=LDO50_RS26540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26540;old_locus_tag=BVI1335_70199 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 153072 154034 . + 0 ID=cds-WP_224020375.1;Parent=gene-LDO50_RS26540;Dbxref=GenBank:WP_224020375.1;Name=WP_224020375.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26540;product=hypothetical protein;protein_id=WP_224020375.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 154059 154232 . + . ID=gene-LDO50_RS26545;Name=LDO50_RS26545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26545;old_locus_tag=BVI1335_70200 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 154059 154232 . + 0 ID=cds-WP_224020376.1;Parent=gene-LDO50_RS26545;Dbxref=GenBank:WP_224020376.1;Name=WP_224020376.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26545;product=hypothetical protein;protein_id=WP_224020376.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 154229 154663 . + . ID=gene-LDO50_RS26550;Name=LDO50_RS26550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26550;old_locus_tag=BVI1335_70201 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 154229 154663 . + 0 ID=cds-WP_224020377.1;Parent=gene-LDO50_RS26550;Dbxref=GenBank:WP_224020377.1;Name=WP_224020377.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26550;product=hypothetical protein;protein_id=WP_224020377.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 154660 154842 . + . ID=gene-LDO50_RS26555;Name=LDO50_RS26555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26555;old_locus_tag=BVI1335_70202 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 154660 154842 . + 0 ID=cds-WP_224020378.1;Parent=gene-LDO50_RS26555;Dbxref=GenBank:WP_224020378.1;Name=WP_224020378.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26555;product=hypothetical protein;protein_id=WP_224020378.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 154839 155150 . + . ID=gene-LDO50_RS26560;Name=LDO50_RS26560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26560;old_locus_tag=BVI1335_70203 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 154839 155150 . + 0 ID=cds-WP_224020379.1;Parent=gene-LDO50_RS26560;Dbxref=GenBank:WP_224020379.1;Name=WP_224020379.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26560;product=hypothetical protein;protein_id=WP_224020379.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 155150 155500 . + . ID=gene-LDO50_RS26565;Name=LDO50_RS26565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26565;old_locus_tag=BVI1335_70204 NZ_CAJZAO010000349.1 Protein Homology CDS 155150 155500 . + 0 ID=cds-WP_224020380.1;Parent=gene-LDO50_RS26565;Dbxref=GenBank:WP_224020380.1;Name=WP_224020380.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022151.6;locus_tag=LDO50_RS26565;product=SLOG family protein;protein_id=WP_224020380.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 155503 155982 . + . ID=gene-LDO50_RS26570;Name=LDO50_RS26570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26570;old_locus_tag=BVI1335_70205 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 155503 155982 . + 0 ID=cds-WP_224020381.1;Parent=gene-LDO50_RS26570;Dbxref=GenBank:WP_224020381.1;Name=WP_224020381.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26570;product=hypothetical protein;protein_id=WP_224020381.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 155982 156203 . + . ID=gene-LDO50_RS26575;Name=LDO50_RS26575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26575;old_locus_tag=BVI1335_70206 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 155982 156203 . + 0 ID=cds-WP_224020382.1;Parent=gene-LDO50_RS26575;Dbxref=GenBank:WP_224020382.1;Name=WP_224020382.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26575;product=hypothetical protein;protein_id=WP_224020382.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 156237 156515 . - . ID=gene-LDO50_RS26580;Name=LDO50_RS26580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26580;old_locus_tag=BVI1335_70207 NZ_CAJZAO010000349.1 GeneMarkS-2+ CDS 156237 156515 . - 0 ID=cds-WP_224020383.1;Parent=gene-LDO50_RS26580;Dbxref=GenBank:WP_224020383.1;Name=WP_224020383.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26580;product=hypothetical protein;protein_id=WP_224020383.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 156512 156994 . - . ID=gene-LDO50_RS26585;Name=LDO50_RS26585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26585;old_locus_tag=BVI1335_70208 NZ_CAJZAO010000349.1 Protein Homology CDS 156512 156994 . - 0 ID=cds-WP_224020384.1;Parent=gene-LDO50_RS26585;Dbxref=GenBank:WP_224020384.1;Name=WP_224020384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525845.1;locus_tag=LDO50_RS26585;product=DUF2778 domain-containing protein;protein_id=WP_224020384.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq pseudogene 157146 157331 . - . ID=gene-LDO50_RS26590;Name=LDO50_RS26590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS26590;old_locus_tag=BVI1335_70210;partial=true;pseudo=true;start_range=.,157146 NZ_CAJZAO010000349.1 Protein Homology CDS 157146 157331 . - 0 ID=cds-LDO50_RS26590;Parent=gene-LDO50_RS26590;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400199.1;locus_tag=LDO50_RS26590;partial=true;product=arginyltransferase;pseudo=true;start_range=.,157146;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 157365 158129 . - . ID=gene-LDO50_RS26595;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=LDO50_RS26595;old_locus_tag=BVI1335_70211 NZ_CAJZAO010000349.1 Protein Homology CDS 157365 158129 . - 0 ID=cds-WP_224020385.1;Parent=gene-LDO50_RS26595;Dbxref=GenBank:WP_224020385.1;Name=WP_224020385.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414405.1;locus_tag=LDO50_RS26595;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_224020385.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 158141 158686 . - . ID=gene-LDO50_RS26600;Name=LDO50_RS26600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26600;old_locus_tag=BVI1335_70212 NZ_CAJZAO010000349.1 Protein Homology CDS 158141 158686 . - 0 ID=cds-WP_011884676.1;Parent=gene-LDO50_RS26600;Dbxref=GenBank:WP_011884676.1;Name=WP_011884676.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897161.1;locus_tag=LDO50_RS26600;product=NUDIX hydrolase;protein_id=WP_011884676.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 158847 158923 . - . ID=gene-LDO50_RS26605;Name=LDO50_RS26605;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS26605;old_locus_tag=BVI1335_TRNA46 NZ_CAJZAO010000349.1 tRNAscan-SE tRNA 158847 158923 . - . ID=rna-LDO50_RS26605;Parent=gene-LDO50_RS26605;anticodon=(pos:complement(158887..158889));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS26605;product=tRNA-Met NZ_CAJZAO010000349.1 tRNAscan-SE exon 158847 158923 . - . ID=exon-LDO50_RS26605-1;Parent=rna-LDO50_RS26605;anticodon=(pos:complement(158887..158889));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS26605;product=tRNA-Met NZ_CAJZAO010000349.1 RefSeq gene 159137 159634 . + . ID=gene-LDO50_RS26610;Name=LDO50_RS26610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26610;old_locus_tag=BVI1335_70214 NZ_CAJZAO010000349.1 Protein Homology CDS 159137 159634 . + 0 ID=cds-WP_011884678.1;Parent=gene-LDO50_RS26610;Dbxref=GenBank:WP_011884678.1;Name=WP_011884678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092484.1;locus_tag=LDO50_RS26610;product=heme-degrading domain-containing protein;protein_id=WP_011884678.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 159644 159976 . + . ID=gene-LDO50_RS26615;Name=LDO50_RS26615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26615;old_locus_tag=BVI1335_70215 NZ_CAJZAO010000349.1 Protein Homology CDS 159644 159976 . + 0 ID=cds-WP_371464602.1;Parent=gene-LDO50_RS26615;Dbxref=GenBank:WP_371464602.1;Name=WP_371464602.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011342944.1;locus_tag=LDO50_RS26615;product=DMT family transporter;protein_id=WP_371464602.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 160008 161168 . + . ID=gene-LDO50_RS26620;Name=LDO50_RS26620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26620;old_locus_tag=BVI1335_70216 NZ_CAJZAO010000349.1 Protein Homology CDS 160008 161168 . + 0 ID=cds-WP_224020386.1;Parent=gene-LDO50_RS26620;Dbxref=GenBank:WP_224020386.1;Name=WP_224020386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484164.1;locus_tag=LDO50_RS26620;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_224020386.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 161288 161716 . - . ID=gene-LDO50_RS26625;Name=LDO50_RS26625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26625;old_locus_tag=BVI1335_70217 NZ_CAJZAO010000349.1 Protein Homology CDS 161288 161716 . - 0 ID=cds-WP_014722967.1;Parent=gene-LDO50_RS26625;Dbxref=GenBank:WP_014722967.1;Name=WP_014722967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722967.1;locus_tag=LDO50_RS26625;product=hypothetical protein;protein_id=WP_014722967.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 162058 163215 . + . ID=gene-LDO50_RS26630;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=LDO50_RS26630;old_locus_tag=BVI1335_70219 NZ_CAJZAO010000349.1 Protein Homology CDS 162058 163215 . + 0 ID=cds-WP_014722969.1;Parent=gene-LDO50_RS26630;Dbxref=GenBank:WP_014722969.1;Name=WP_014722969.1;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722969.1;locus_tag=LDO50_RS26630;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=WP_014722969.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 163232 164041 . + . ID=gene-LDO50_RS26635;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=LDO50_RS26635;old_locus_tag=BVI1335_70220 NZ_CAJZAO010000349.1 Protein Homology CDS 163232 164041 . + 0 ID=cds-WP_014722970.1;Parent=gene-LDO50_RS26635;Dbxref=GenBank:WP_014722970.1;Name=WP_014722970.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ssuC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897155.1;locus_tag=LDO50_RS26635;product=aliphatic sulfonate ABC transporter permease SsuC;protein_id=WP_014722970.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 164038 164408 . + . ID=gene-LDO50_RS32070;Name=LDO50_RS32070;end_range=164408,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS32070;partial=true NZ_CAJZAO010000349.1 Protein Homology CDS 164038 164408 . + 0 ID=cds-WP_443797874.1;Parent=gene-LDO50_RS32070;Dbxref=GenBank:WP_443797874.1;Name=WP_443797874.1;Ontology_term=GO:0005524;end_range=164408,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897154.1;locus_tag=LDO50_RS32070;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_443797874.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq pseudogene 164419 164605 . + . ID=gene-LDO50_RS32075;Name=LDO50_RS32075;end_range=164605,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS32075;old_locus_tag=BVI1335_70222;partial=true;pseudo=true;start_range=.,164419 NZ_CAJZAO010000349.1 Protein Homology CDS 164419 164605 . + 1 ID=cds-LDO50_RS32075;Parent=gene-LDO50_RS32075;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=164605,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009905621.1;locus_tag=LDO50_RS32075;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;start_range=.,164419;transl_table=11 NZ_CAJZAO010000349.1 RefSeq pseudogene 164616 164830 . + . ID=gene-LDO50_RS32080;Name=LDO50_RS32080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS32080;old_locus_tag=BVI1335_70223;partial=true;pseudo=true;start_range=.,164616 NZ_CAJZAO010000349.1 Protein Homology CDS 164616 164830 . + 2 ID=cds-LDO50_RS32080;Parent=gene-LDO50_RS32080;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009905621.1;locus_tag=LDO50_RS32080;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;start_range=.,164616;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 164886 165101 . + . ID=gene-LDO50_RS26645;Name=LDO50_RS26645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26645;old_locus_tag=BVI1335_70224 NZ_CAJZAO010000349.1 Protein Homology CDS 164886 165101 . + 0 ID=cds-WP_006400187.1;Parent=gene-LDO50_RS26645;Dbxref=GenBank:WP_006400187.1;Name=WP_006400187.1;Ontology_term=GO:0015689;gbkey=CDS;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007588023.1;locus_tag=LDO50_RS26645;product=TOBE domain-containing protein;protein_id=WP_006400187.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 165245 165442 . + . ID=gene-LDO50_RS26650;Name=LDO50_RS26650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26650;old_locus_tag=BVI1335_70225 NZ_CAJZAO010000349.1 Protein Homology CDS 165245 165442 . + 0 ID=cds-WP_011884695.1;Parent=gene-LDO50_RS26650;Dbxref=GenBank:WP_011884695.1;Name=WP_011884695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751018.1;locus_tag=LDO50_RS26650;product=hypothetical protein;protein_id=WP_011884695.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 165498 165752 . + . ID=gene-LDO50_RS26655;Name=LDO50_RS26655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26655;old_locus_tag=BVI1335_70226 NZ_CAJZAO010000349.1 Protein Homology CDS 165498 165752 . + 0 ID=cds-WP_011884697.1;Parent=gene-LDO50_RS26655;Dbxref=GenBank:WP_011884697.1;Name=WP_011884697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884697.1;locus_tag=LDO50_RS26655;product=hypothetical protein;protein_id=WP_011884697.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 165889 166875 . + . ID=gene-LDO50_RS26660;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=LDO50_RS26660;old_locus_tag=BVI1335_70227 NZ_CAJZAO010000349.1 Protein Homology CDS 165889 166875 . + 0 ID=cds-WP_014722972.1;Parent=gene-LDO50_RS26660;Dbxref=GenBank:WP_014722972.1;Name=WP_014722972.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491499.1;locus_tag=LDO50_RS26660;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_014722972.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 166935 167010 . + . ID=gene-LDO50_RS26665;Name=LDO50_RS26665;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS26665;old_locus_tag=BVI1335_TRNA2 NZ_CAJZAO010000349.1 tRNAscan-SE tRNA 166935 167010 . + . ID=rna-LDO50_RS26665;Parent=gene-LDO50_RS26665;anticodon=(pos:166968..166970);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS26665;product=tRNA-His NZ_CAJZAO010000349.1 tRNAscan-SE exon 166935 167010 . + . ID=exon-LDO50_RS26665-1;Parent=rna-LDO50_RS26665;anticodon=(pos:166968..166970);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS26665;product=tRNA-His NZ_CAJZAO010000349.1 RefSeq gene 167413 168141 . - . ID=gene-LDO50_RS26670;Name=LDO50_RS26670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26670;old_locus_tag=BVI1335_70228 NZ_CAJZAO010000349.1 Protein Homology CDS 167413 168141 . - 0 ID=cds-WP_045579472.1;Parent=gene-LDO50_RS26670;Dbxref=GenBank:WP_045579472.1;Name=WP_045579472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547634.1;locus_tag=LDO50_RS26670;product=lysozyme inhibitor LprI family protein;protein_id=WP_045579472.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 168789 170228 . + . ID=gene-LDO50_RS26675;Name=LDO50_RS26675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26675;old_locus_tag=BVI1335_70230 NZ_CAJZAO010000349.1 Protein Homology CDS 168789 170228 . + 0 ID=cds-WP_011884703.1;Parent=gene-LDO50_RS26675;Dbxref=GenBank:WP_011884703.1;Name=WP_011884703.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722974.1;locus_tag=LDO50_RS26675;product=PAS domain-containing sensor histidine kinase;protein_id=WP_011884703.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 170307 170771 . - . ID=gene-LDO50_RS26680;Name=LDO50_RS26680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26680;old_locus_tag=BVI1335_70231 NZ_CAJZAO010000349.1 Protein Homology CDS 170307 170771 . - 0 ID=cds-WP_011884706.1;Parent=gene-LDO50_RS26680;Dbxref=GenBank:WP_011884706.1;Name=WP_011884706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884706.1;locus_tag=LDO50_RS26680;product=plasmid fertility inhibition factor family protein;protein_id=WP_011884706.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 171389 172132 . - . ID=gene-LDO50_RS26685;Name=LDO50_RS26685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26685;old_locus_tag=BVI1335_70232 NZ_CAJZAO010000349.1 Protein Homology CDS 171389 172132 . - 0 ID=cds-WP_014722976.1;Parent=gene-LDO50_RS26685;Dbxref=GenBank:WP_014722976.1;Name=WP_014722976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757998.1;locus_tag=LDO50_RS26685;product=DUF695 domain-containing protein;protein_id=WP_014722976.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 172253 172561 . + . ID=gene-LDO50_RS26690;Name=LDO50_RS26690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26690;old_locus_tag=BVI1335_70234 NZ_CAJZAO010000349.1 Protein Homology CDS 172253 172561 . + 0 ID=cds-WP_034193095.1;Parent=gene-LDO50_RS26690;Dbxref=GenBank:WP_034193095.1;Name=WP_034193095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884709.1;locus_tag=LDO50_RS26690;product=hypothetical protein;protein_id=WP_034193095.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 172837 173310 . + . ID=gene-LDO50_RS26695;Name=LDO50_RS26695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26695;old_locus_tag=BVI1335_70233 NZ_CAJZAO010000349.1 Protein Homology CDS 172837 173310 . + 0 ID=cds-WP_059734166.1;Parent=gene-LDO50_RS26695;Dbxref=GenBank:WP_059734166.1;Name=WP_059734166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363804.1;locus_tag=LDO50_RS26695;product=VOC family protein;protein_id=WP_059734166.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 173400 174371 . - . ID=gene-LDO50_RS26700;Name=LDO50_RS26700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26700;old_locus_tag=BVI1335_70235 NZ_CAJZAO010000349.1 Protein Homology CDS 173400 174371 . - 0 ID=cds-WP_224020387.1;Parent=gene-LDO50_RS26700;Dbxref=GenBank:WP_224020387.1;Name=WP_224020387.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884713.1;locus_tag=LDO50_RS26700;product=GGDEF domain-containing protein;protein_id=WP_224020387.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 174600 174821 . + . ID=gene-LDO50_RS26705;Name=LDO50_RS26705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26705;old_locus_tag=BVI1335_70236 NZ_CAJZAO010000349.1 Protein Homology CDS 174600 174821 . + 0 ID=cds-WP_126220170.1;Parent=gene-LDO50_RS26705;Dbxref=GenBank:WP_126220170.1;Name=WP_126220170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884715.1;locus_tag=LDO50_RS26705;product=hypothetical protein;protein_id=WP_126220170.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 174981 175604 . - . ID=gene-LDO50_RS26710;Name=LDO50_RS26710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26710;old_locus_tag=BVI1335_70237 NZ_CAJZAO010000349.1 Protein Homology CDS 174981 175604 . - 0 ID=cds-WP_011884717.1;Parent=gene-LDO50_RS26710;Dbxref=GenBank:WP_011884717.1;Name=WP_011884717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351878.1;locus_tag=LDO50_RS26710;product=phospholipase D family nuclease;protein_id=WP_011884717.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 175842 176894 . + . ID=gene-LDO50_RS26715;Name=LDO50_RS26715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26715;old_locus_tag=BVI1335_70238 NZ_CAJZAO010000349.1 Protein Homology CDS 175842 176894 . + 0 ID=cds-WP_176300193.1;Parent=gene-LDO50_RS26715;Dbxref=GenBank:WP_176300193.1;Name=WP_176300193.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601897.1;locus_tag=LDO50_RS26715;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_176300193.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq pseudogene 177058 177244 . + . ID=gene-LDO50_RS26720;Name=LDO50_RS26720;end_range=177244,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS26720;partial=true;pseudo=true;start_range=.,177058 NZ_CAJZAO010000349.1 Protein Homology CDS 177058 177244 . + 0 ID=cds-LDO50_RS26720;Parent=gene-LDO50_RS26720;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=177244,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495222.1;locus_tag=LDO50_RS26720;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,177058;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 177398 178537 . + . ID=gene-LDO50_RS26725;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=LDO50_RS26725;old_locus_tag=BVI1335_70240 NZ_CAJZAO010000349.1 Protein Homology CDS 177398 178537 . + 0 ID=cds-WP_176327572.1;Parent=gene-LDO50_RS26725;Dbxref=GenBank:WP_176327572.1;Name=WP_176327572.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722980.1;locus_tag=LDO50_RS26725;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_176327572.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 178534 179592 . + . ID=gene-LDO50_RS26730;Name=LDO50_RS26730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26730;old_locus_tag=BVI1335_70241 NZ_CAJZAO010000349.1 Protein Homology CDS 178534 179592 . + 0 ID=cds-WP_011884723.1;Parent=gene-LDO50_RS26730;Dbxref=GenBank:WP_011884723.1;Name=WP_011884723.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400158.1;locus_tag=LDO50_RS26730;product=permease;protein_id=WP_011884723.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 179805 180227 . + . ID=gene-LDO50_RS26735;Name=LDO50_RS26735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26735;old_locus_tag=BVI1335_70242 NZ_CAJZAO010000349.1 Protein Homology CDS 179805 180227 . + 0 ID=cds-WP_011884724.1;Parent=gene-LDO50_RS26735;Dbxref=GenBank:WP_011884724.1;Name=WP_011884724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897119.1;locus_tag=LDO50_RS26735;product=hypothetical protein;protein_id=WP_011884724.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 180276 181109 . - . ID=gene-LDO50_RS26740;Name=LDO50_RS26740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26740;old_locus_tag=BVI1335_70243 NZ_CAJZAO010000349.1 Protein Homology CDS 180276 181109 . - 0 ID=cds-WP_014722982.1;Parent=gene-LDO50_RS26740;Dbxref=GenBank:WP_014722982.1;Name=WP_014722982.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004545156.1;locus_tag=LDO50_RS26740;product=ABC transporter permease;protein_id=WP_014722982.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 181116 182030 . - . ID=gene-LDO50_RS26745;Name=nodI;gbkey=Gene;gene=nodI;gene_biotype=protein_coding;locus_tag=LDO50_RS26745;old_locus_tag=BVI1335_70244 NZ_CAJZAO010000349.1 Protein Homology CDS 181116 182030 . - 0 ID=cds-WP_014722983.1;Parent=gene-LDO50_RS26745;Dbxref=GenBank:WP_014722983.1;Name=WP_014722983.1;gbkey=CDS;gene=nodI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897117.1;locus_tag=LDO50_RS26745;product=nodulation factor ABC transporter ATP-binding protein NodI;protein_id=WP_014722983.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 182356 182853 . + . ID=gene-LDO50_RS26750;Name=LDO50_RS26750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26750;old_locus_tag=BVI1335_70245 NZ_CAJZAO010000349.1 Protein Homology CDS 182356 182853 . + 0 ID=cds-WP_011884727.1;Parent=gene-LDO50_RS26750;Dbxref=GenBank:WP_011884727.1;Name=WP_011884727.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351890.1;locus_tag=LDO50_RS26750;product=universal stress protein;protein_id=WP_011884727.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 182965 183672 . - . ID=gene-LDO50_RS26755;Name=LDO50_RS26755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26755;old_locus_tag=BVI1335_70246 NZ_CAJZAO010000349.1 Protein Homology CDS 182965 183672 . - 0 ID=cds-WP_045579133.1;Parent=gene-LDO50_RS26755;Dbxref=GenBank:WP_045579133.1;Name=WP_045579133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404871.1;locus_tag=LDO50_RS26755;product=DUF2939 domain-containing protein;protein_id=WP_045579133.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 183702 184040 . - . ID=gene-LDO50_RS26760;Name=LDO50_RS26760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26760;old_locus_tag=BVI1335_70247 NZ_CAJZAO010000349.1 Protein Homology CDS 183702 184040 . - 0 ID=cds-WP_011884731.1;Parent=gene-LDO50_RS26760;Dbxref=GenBank:WP_011884731.1;Name=WP_011884731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600929.1;locus_tag=LDO50_RS26760;product=hypothetical protein;protein_id=WP_011884731.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 184067 184714 . - . ID=gene-LDO50_RS26765;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=LDO50_RS26765;old_locus_tag=BVI1335_70248 NZ_CAJZAO010000349.1 Protein Homology CDS 184067 184714 . - 0 ID=cds-WP_011884733.1;Parent=gene-LDO50_RS26765;Dbxref=GenBank:WP_011884733.1;Name=WP_011884733.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400150.1;locus_tag=LDO50_RS26765;product=transcriptional repressor LexA;protein_id=WP_011884733.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 184979 186016 . + . ID=gene-LDO50_RS26770;Name=LDO50_RS26770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26770;old_locus_tag=BVI1335_70249 NZ_CAJZAO010000349.1 Protein Homology CDS 184979 186016 . + 0 ID=cds-WP_034193191.1;Parent=gene-LDO50_RS26770;Dbxref=GenBank:WP_034193191.1;Name=WP_034193191.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400148.1;locus_tag=LDO50_RS26770;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_034193191.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 186163 187050 . + . ID=gene-LDO50_RS26775;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=LDO50_RS26775;old_locus_tag=BVI1335_70251 NZ_CAJZAO010000349.1 Protein Homology CDS 186163 187050 . + 0 ID=cds-WP_014722988.1;Parent=gene-LDO50_RS26775;Dbxref=GenBank:WP_014722988.1;Name=WP_014722988.1;Ontology_term=GO:1902358,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysT;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010103892.1;locus_tag=LDO50_RS26775;product=sulfate ABC transporter permease subunit CysT;protein_id=WP_014722988.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 187047 187994 . + . ID=gene-LDO50_RS26780;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=LDO50_RS26780;old_locus_tag=BVI1335_70250 NZ_CAJZAO010000349.1 Protein Homology CDS 187047 187994 . + 0 ID=cds-WP_045579131.1;Parent=gene-LDO50_RS26780;Dbxref=GenBank:WP_045579131.1;Name=WP_045579131.1;Ontology_term=GO:1902358,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysW;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363820.1;locus_tag=LDO50_RS26780;product=sulfate ABC transporter permease subunit CysW;protein_id=WP_045579131.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 188008 189066 . + . ID=gene-LDO50_RS26785;Name=LDO50_RS26785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26785;old_locus_tag=BVI1335_70252 NZ_CAJZAO010000349.1 Protein Homology CDS 188008 189066 . + 0 ID=cds-WP_059456859.1;Parent=gene-LDO50_RS26785;Dbxref=GenBank:WP_059456859.1;Name=WP_059456859.1;Ontology_term=GO:0005524,GO:0015419,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897109.1;locus_tag=LDO50_RS26785;product=sulfate/molybdate ABC transporter ATP-binding protein;protein_id=WP_059456859.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 189147 190073 . + . ID=gene-LDO50_RS26790;Name=LDO50_RS26790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26790;old_locus_tag=BVI1335_70253 NZ_CAJZAO010000349.1 Protein Homology CDS 189147 190073 . + 0 ID=cds-WP_011884743.1;Parent=gene-LDO50_RS26790;Dbxref=GenBank:WP_011884743.1;Name=WP_011884743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884743.1;locus_tag=LDO50_RS26790;product=CysB family HTH-type transcriptional regulator;protein_id=WP_011884743.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 190605 191555 . + . ID=gene-LDO50_RS26795;Name=LDO50_RS26795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26795;old_locus_tag=BVI1335_70255 NZ_CAJZAO010000349.1 Protein Homology CDS 190605 191555 . + 0 ID=cds-WP_059462586.1;Parent=gene-LDO50_RS26795;Dbxref=GenBank:WP_059462586.1;Name=WP_059462586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332399.1;locus_tag=LDO50_RS26795;product=sugar ABC transporter substrate-binding protein;protein_id=WP_059462586.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 191719 193332 . + . ID=gene-LDO50_RS26800;Name=LDO50_RS26800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26800;old_locus_tag=BVI1335_70256 NZ_CAJZAO010000349.1 Protein Homology CDS 191719 193332 . + 0 ID=cds-WP_011884749.1;Parent=gene-LDO50_RS26800;Dbxref=GenBank:WP_011884749.1;Name=WP_011884749.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884749.1;locus_tag=LDO50_RS26800;product=sugar ABC transporter ATP-binding protein;protein_id=WP_011884749.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 193329 194348 . + . ID=gene-LDO50_RS26805;Name=LDO50_RS26805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26805;old_locus_tag=BVI1335_70257 NZ_CAJZAO010000349.1 Protein Homology CDS 193329 194348 . + 0 ID=cds-WP_011884751.1;Parent=gene-LDO50_RS26805;Dbxref=GenBank:WP_011884751.1;Name=WP_011884751.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759467.1;locus_tag=LDO50_RS26805;product=ABC transporter permease;protein_id=WP_011884751.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 194384 195415 . + . ID=gene-LDO50_RS26810;Name=LDO50_RS26810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26810;old_locus_tag=BVI1335_70258 NZ_CAJZAO010000349.1 Protein Homology CDS 194384 195415 . + 0 ID=cds-WP_034193102.1;Parent=gene-LDO50_RS26810;Dbxref=GenBank:WP_034193102.1;Name=WP_034193102.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759468.1;locus_tag=LDO50_RS26810;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_034193102.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 195412 195837 . + . ID=gene-LDO50_RS32085;Name=LDO50_RS32085;end_range=195837,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS32085;partial=true NZ_CAJZAO010000349.1 Protein Homology CDS 195412 195837 . + 0 ID=cds-WP_443797875.1;Parent=gene-LDO50_RS32085;Dbxref=GenBank:WP_443797875.1;Name=WP_443797875.1;end_range=195837,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213383.1;locus_tag=LDO50_RS32085;partial=true;product=PfkB family carbohydrate kinase;protein_id=WP_443797875.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 195848 196095 . + . ID=gene-LDO50_RS32090;Name=LDO50_RS32090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS32090;old_locus_tag=BVI1335_70260;partial=true;start_range=.,195848 NZ_CAJZAO010000349.1 Protein Homology CDS 195848 196095 . + 2 ID=cds-WP_443797876.1;Parent=gene-LDO50_RS32090;Dbxref=GenBank:WP_443797876.1;Name=WP_443797876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656798.1;locus_tag=LDO50_RS32090;partial=true;product=PfkB family carbohydrate kinase;protein_id=WP_443797876.1;start_range=.,195848;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 196371 198164 . + . ID=gene-LDO50_RS26820;Name=LDO50_RS26820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26820;old_locus_tag=BVI1335_70261 NZ_CAJZAO010000349.1 Protein Homology CDS 196371 198164 . + 0 ID=cds-WP_069264901.1;Parent=gene-LDO50_RS26820;Dbxref=GenBank:WP_069264901.1;Name=WP_069264901.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328438.1;locus_tag=LDO50_RS26820;product=methyl-accepting chemotaxis protein;protein_id=WP_069264901.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 198706 200628 . + . ID=gene-LDO50_RS26825;Name=LDO50_RS26825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26825;old_locus_tag=BVI1335_70262 NZ_CAJZAO010000349.1 Protein Homology CDS 198706 200628 . + 0 ID=cds-WP_011884759.1;Parent=gene-LDO50_RS26825;Dbxref=GenBank:WP_011884759.1;Name=WP_011884759.1;Ontology_term=GO:0004672;gbkey=CDS;go_function=protein kinase activity|0004672||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020165153.1;locus_tag=LDO50_RS26825;product=PrkA family serine protein kinase;protein_id=WP_011884759.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 200754 202022 . + . ID=gene-LDO50_RS26830;Name=LDO50_RS26830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26830;old_locus_tag=BVI1335_70263 NZ_CAJZAO010000349.1 Protein Homology CDS 200754 202022 . + 0 ID=cds-WP_059462585.1;Parent=gene-LDO50_RS26830;Dbxref=GenBank:WP_059462585.1;Name=WP_059462585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332328.1;locus_tag=LDO50_RS26830;product=YeaH/YhbH family protein;protein_id=WP_059462585.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 202019 203698 . + . ID=gene-LDO50_RS26835;Name=LDO50_RS26835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26835;old_locus_tag=BVI1335_70264 NZ_CAJZAO010000349.1 Protein Homology CDS 202019 203698 . + 0 ID=cds-WP_224020388.1;Parent=gene-LDO50_RS26835;Dbxref=GenBank:WP_224020388.1;Name=WP_224020388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694280.1;locus_tag=LDO50_RS26835;product=SpoVR family protein;protein_id=WP_224020388.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 203945 205249 . + . ID=gene-LDO50_RS26840;Name=LDO50_RS26840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26840;old_locus_tag=BVI1335_70265 NZ_CAJZAO010000349.1 Protein Homology CDS 203945 205249 . + 0 ID=cds-WP_011884766.1;Parent=gene-LDO50_RS26840;Dbxref=GenBank:WP_011884766.1;Name=WP_011884766.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754308.1;locus_tag=LDO50_RS26840;product=MFS family transporter;protein_id=WP_011884766.1;transl_table=11 NZ_CAJZAO010000349.1 RefSeq gene 205604 206071 . + . ID=gene-LDO50_RS26845;Name=LDO50_RS26845;end_range=206071,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26845;partial=true NZ_CAJZAO010000349.1 Protein Homology CDS 205604 206071 . + 0 ID=cds-WP_224020389.1;Parent=gene-LDO50_RS26845;Dbxref=GenBank:WP_224020389.1;Name=WP_224020389.1;Ontology_term=GO:0006508,GO:0004252,GO:0008270,GO:0016020;end_range=206071,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884768.1;locus_tag=LDO50_RS26845;partial=true;product=rhomboid family intramembrane serine protease;protein_id=WP_224020389.1;transl_table=11 ##sequence-region NZ_CAJZAO010000350.1 1 29317 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000350.1 RefSeq region 1 29317 . + . ID=NZ_CAJZAO010000350.1:1..29317;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_70 NZ_CAJZAO010000350.1 RefSeq gene 1 309 . + . ID=gene-LDO50_RS31170;Name=LDO50_RS31170;end_range=309,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31170;partial=true;start_range=.,1 NZ_CAJZAO010000350.1 Protein Homology CDS 1 309 . + 1 ID=cds-WP_443797877.1;Parent=gene-LDO50_RS31170;Dbxref=GenBank:WP_443797877.1;Name=WP_443797877.1;Ontology_term=GO:0055085,GO:0015562;end_range=309,.;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355939.1;locus_tag=LDO50_RS31170;partial=true;product=TolC family protein;protein_id=WP_443797877.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000350.1 RefSeq gene 320 887 . + . ID=gene-LDO50_RS31175;Name=LDO50_RS31175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31175;old_locus_tag=BVI1335_700002;partial=true;start_range=.,320 NZ_CAJZAO010000350.1 Protein Homology CDS 320 887 . + 1 ID=cds-WP_372586122.1;Parent=gene-LDO50_RS31175;Dbxref=GenBank:WP_372586122.1;Name=WP_372586122.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881478.1;locus_tag=LDO50_RS31175;partial=true;product=TolC family protein;protein_id=WP_372586122.1;start_range=.,320;transl_table=11 NZ_CAJZAO010000350.1 RefSeq gene 959 1369 . - . ID=gene-LDO50_RS26855;Name=LDO50_RS26855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26855;old_locus_tag=BVI1335_700003 NZ_CAJZAO010000350.1 Protein Homology CDS 959 1369 . - 0 ID=cds-WP_011881477.1;Parent=gene-LDO50_RS26855;Dbxref=GenBank:WP_011881477.1;Name=WP_011881477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365505.1;locus_tag=LDO50_RS26855;product=TIGR02594 family protein;protein_id=WP_011881477.1;transl_table=11 NZ_CAJZAO010000350.1 RefSeq gene 1609 3426 . - . ID=gene-LDO50_RS26860;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LDO50_RS26860;old_locus_tag=BVI1335_700004 NZ_CAJZAO010000350.1 Protein Homology CDS 1609 3426 . - 0 ID=cds-WP_034194938.1;Parent=gene-LDO50_RS26860;Dbxref=GenBank:WP_034194938.1;Name=WP_034194938.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004549145.1;locus_tag=LDO50_RS26860;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_034194938.1;transl_table=11 NZ_CAJZAO010000350.1 RefSeq gene 4442 5659 . + . ID=gene-LDO50_RS26865;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=LDO50_RS26865;old_locus_tag=BVI1335_700006 NZ_CAJZAO010000350.1 Protein Homology CDS 4442 5659 . + 0 ID=cds-WP_011881474.1;Parent=gene-LDO50_RS26865;Dbxref=GenBank:WP_011881474.1;Name=WP_011881474.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476298.1;locus_tag=LDO50_RS26865;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_011881474.1;transl_table=11 NZ_CAJZAO010000350.1 RefSeq gene 5840 6520 . - . ID=gene-LDO50_RS26870;Name=LDO50_RS26870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26870;old_locus_tag=BVI1335_700007 NZ_CAJZAO010000350.1 Protein Homology CDS 5840 6520 . - 0 ID=cds-WP_224020393.1;Parent=gene-LDO50_RS26870;Dbxref=GenBank:WP_224020393.1;Name=WP_224020393.1;Ontology_term=GO:0015288,GO:0042834;gbkey=CDS;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338547.1;locus_tag=LDO50_RS26870;product=OmpA/MotB family protein;protein_id=WP_224020393.1;transl_table=11 NZ_CAJZAO010000350.1 RefSeq gene 6539 7303 . - . ID=gene-LDO50_RS26875;Name=LDO50_RS26875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26875;old_locus_tag=BVI1335_700008 NZ_CAJZAO010000350.1 Protein Homology CDS 6539 7303 . - 0 ID=cds-WP_011881472.1;Parent=gene-LDO50_RS26875;Dbxref=GenBank:WP_011881472.1;Name=WP_011881472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397961.1;locus_tag=LDO50_RS26875;product=flagellar motor protein;protein_id=WP_011881472.1;transl_table=11 NZ_CAJZAO010000350.1 RefSeq gene 7326 8570 . - . ID=gene-LDO50_RS26880;Name=LDO50_RS26880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26880;old_locus_tag=BVI1335_700009 NZ_CAJZAO010000350.1 Protein Homology CDS 7326 8570 . - 0 ID=cds-WP_014724565.1;Parent=gene-LDO50_RS26880;Dbxref=GenBank:WP_014724565.1;Name=WP_014724565.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338548.1;locus_tag=LDO50_RS26880;product=Crp/Fnr family transcriptional regulator;protein_id=WP_014724565.1;transl_table=11 NZ_CAJZAO010000350.1 RefSeq gene 9051 10031 . + . ID=gene-LDO50_RS26885;Name=LDO50_RS26885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26885;old_locus_tag=BVI1335_700011 NZ_CAJZAO010000350.1 Protein Homology CDS 9051 10031 . + 0 ID=cds-WP_175983708.1;Parent=gene-LDO50_RS26885;Dbxref=GenBank:WP_175983708.1;Name=WP_175983708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724562.1;locus_tag=LDO50_RS26885;product=hypothetical protein;protein_id=WP_175983708.1;transl_table=11 NZ_CAJZAO010000350.1 RefSeq gene 10071 11765 . - . ID=gene-LDO50_RS26890;Name=LDO50_RS26890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26890;old_locus_tag=BVI1335_700012 NZ_CAJZAO010000350.1 Protein Homology CDS 10071 11765 . - 0 ID=cds-WP_011881468.1;Parent=gene-LDO50_RS26890;Dbxref=GenBank:WP_011881468.1;Name=WP_011881468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900170.1;locus_tag=LDO50_RS26890;product=bacteriophage N4 adsorption protein A;protein_id=WP_011881468.1;transl_table=11 NZ_CAJZAO010000350.1 RefSeq gene 11762 13723 . - . ID=gene-LDO50_RS26895;Name=LDO50_RS26895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26895;old_locus_tag=BVI1335_700013 NZ_CAJZAO010000350.1 Protein Homology CDS 11762 13723 . - 0 ID=cds-WP_059668935.1;Parent=gene-LDO50_RS26895;Dbxref=GenBank:WP_059668935.1;Name=WP_059668935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881467.1;locus_tag=LDO50_RS26895;product=glycosyl transferase family protein;protein_id=WP_059668935.1;transl_table=11 NZ_CAJZAO010000350.1 RefSeq gene 14538 14921 . + . ID=gene-LDO50_RS26900;Name=LDO50_RS26900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26900;old_locus_tag=BVI1335_700015 NZ_CAJZAO010000350.1 GeneMarkS-2+ CDS 14538 14921 . + 0 ID=cds-WP_224020396.1;Parent=gene-LDO50_RS26900;Dbxref=GenBank:WP_224020396.1;Name=WP_224020396.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS26900;product=hypothetical protein;protein_id=WP_224020396.1;transl_table=11 NZ_CAJZAO010000350.1 RefSeq gene 14934 16577 . + . ID=gene-LDO50_RS26905;Name=LDO50_RS26905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26905;old_locus_tag=BVI1335_700016 NZ_CAJZAO010000350.1 Protein Homology CDS 14934 16577 . + 0 ID=cds-WP_011881464.1;Parent=gene-LDO50_RS26905;Dbxref=GenBank:WP_011881464.1;Name=WP_011881464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759221.1;locus_tag=LDO50_RS26905;product=DUF2334 domain-containing protein;protein_id=WP_011881464.1;transl_table=11 NZ_CAJZAO010000350.1 RefSeq gene 16681 17640 . + . ID=gene-LDO50_RS26910;Name=LDO50_RS26910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26910;old_locus_tag=BVI1335_700017 NZ_CAJZAO010000350.1 Protein Homology CDS 16681 17640 . + 0 ID=cds-WP_034194936.1;Parent=gene-LDO50_RS26910;Dbxref=GenBank:WP_034194936.1;Name=WP_034194936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724552.1;locus_tag=LDO50_RS26910;product=hypothetical protein;protein_id=WP_034194936.1;transl_table=11 NZ_CAJZAO010000350.1 RefSeq gene 17954 18781 . - . ID=gene-LDO50_RS26915;Name=LDO50_RS26915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26915;old_locus_tag=BVI1335_700018 NZ_CAJZAO010000350.1 Protein Homology CDS 17954 18781 . - 0 ID=cds-WP_059567482.1;Parent=gene-LDO50_RS26915;Dbxref=GenBank:WP_059567482.1;Name=WP_059567482.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549089.1;locus_tag=LDO50_RS26915;product=class I SAM-dependent methyltransferase;protein_id=WP_059567482.1;transl_table=11 NZ_CAJZAO010000350.1 RefSeq pseudogene 19147 19377 . - . ID=gene-LDO50_RS26920;Name=LDO50_RS26920;end_range=19377,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS26920;partial=true;pseudo=true;start_range=.,19147 NZ_CAJZAO010000350.1 Protein Homology CDS 19147 19377 . - 0 ID=cds-LDO50_RS26920;Parent=gene-LDO50_RS26920;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=19377,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007576653.1;locus_tag=LDO50_RS26920;partial=true;product=transglutaminase family protein;pseudo=true;start_range=.,19147;transl_table=11 NZ_CAJZAO010000350.1 RefSeq gene 19429 19668 . - . ID=gene-LDO50_RS26925;Name=LDO50_RS26925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26925;old_locus_tag=BVI1335_700020 NZ_CAJZAO010000350.1 Protein Homology CDS 19429 19668 . - 0 ID=cds-WP_027792420.1;Parent=gene-LDO50_RS26925;Dbxref=GenBank:WP_027792420.1;Name=WP_027792420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014253392.1;locus_tag=LDO50_RS26925;product=hypothetical protein;protein_id=WP_027792420.1;transl_table=11 NZ_CAJZAO010000350.1 RefSeq gene 19988 20326 . - . ID=gene-LDO50_RS26930;Name=LDO50_RS26930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26930;old_locus_tag=BVI1335_700021 NZ_CAJZAO010000350.1 Protein Homology CDS 19988 20326 . - 0 ID=cds-WP_034194934.1;Parent=gene-LDO50_RS26930;Dbxref=GenBank:WP_034194934.1;Name=WP_034194934.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013089.6;locus_tag=LDO50_RS26930;product=DMT family transporter;protein_id=WP_034194934.1;transl_table=11 NZ_CAJZAO010000350.1 RefSeq gene 20598 21083 . - . ID=gene-LDO50_RS26935;Name=LDO50_RS26935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26935;old_locus_tag=BVI1335_700023 NZ_CAJZAO010000350.1 Protein Homology CDS 20598 21083 . - 0 ID=cds-WP_059475514.1;Parent=gene-LDO50_RS26935;Dbxref=GenBank:WP_059475514.1;Name=WP_059475514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338550.1;locus_tag=LDO50_RS26935;product=DUF3761 domain-containing protein;protein_id=WP_059475514.1;transl_table=11 NZ_CAJZAO010000350.1 RefSeq gene 21145 21282 . - . ID=gene-LDO50_RS26940;Name=LDO50_RS26940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26940 NZ_CAJZAO010000350.1 Protein Homology CDS 21145 21282 . - 0 ID=cds-WP_014724546.1;Parent=gene-LDO50_RS26940;Dbxref=GenBank:WP_014724546.1;Name=WP_014724546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365487.1;locus_tag=LDO50_RS26940;product=HHHH-motif protein;protein_id=WP_014724546.1;transl_table=11 NZ_CAJZAO010000350.1 RefSeq gene 21837 22532 . + . ID=gene-LDO50_RS26945;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=LDO50_RS26945;old_locus_tag=BVI1335_700025 NZ_CAJZAO010000350.1 Protein Homology CDS 21837 22532 . + 0 ID=cds-WP_011881456.1;Parent=gene-LDO50_RS26945;Dbxref=GenBank:WP_011881456.1;Name=WP_011881456.1;Ontology_term=GO:0006355,GO:0006547,GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-histidine metabolic process|0006547||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900192.1;locus_tag=LDO50_RS26945;product=histidine utilization repressor;protein_id=WP_011881456.1;transl_table=11 NZ_CAJZAO010000350.1 RefSeq gene 22743 23096 . + . ID=gene-LDO50_RS26950;Name=LDO50_RS26950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26950;old_locus_tag=BVI1335_700027 NZ_CAJZAO010000350.1 Protein Homology CDS 22743 23096 . + 0 ID=cds-WP_011881455.1;Parent=gene-LDO50_RS26950;Dbxref=GenBank:WP_011881455.1;Name=WP_011881455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355985.1;locus_tag=LDO50_RS26950;product=hypothetical protein;protein_id=WP_011881455.1;transl_table=11 NZ_CAJZAO010000350.1 RefSeq gene 23143 23946 . - . ID=gene-LDO50_RS26955;Name=LDO50_RS26955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26955;old_locus_tag=BVI1335_700028 NZ_CAJZAO010000350.1 Protein Homology CDS 23143 23946 . - 0 ID=cds-WP_014724543.1;Parent=gene-LDO50_RS26955;Dbxref=GenBank:WP_014724543.1;Name=WP_014724543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338560.1;locus_tag=LDO50_RS26955;product=alpha/beta fold hydrolase;protein_id=WP_014724543.1;transl_table=11 NZ_CAJZAO010000350.1 RefSeq gene 24028 24945 . - . ID=gene-LDO50_RS26960;Name=LDO50_RS26960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26960;old_locus_tag=BVI1335_700029 NZ_CAJZAO010000350.1 Protein Homology CDS 24028 24945 . - 0 ID=cds-WP_011881453.1;Parent=gene-LDO50_RS26960;Dbxref=GenBank:WP_011881453.1;Name=WP_011881453.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355987.1;locus_tag=LDO50_RS26960;product=LysR family transcriptional regulator;protein_id=WP_011881453.1;transl_table=11 NZ_CAJZAO010000350.1 RefSeq gene 25147 25392 . - . ID=gene-LDO50_RS26965;Name=LDO50_RS26965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26965 NZ_CAJZAO010000350.1 Protein Homology CDS 25147 25392 . - 0 ID=cds-WP_011881452.1;Parent=gene-LDO50_RS26965;Dbxref=GenBank:WP_011881452.1;Name=WP_011881452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750807.1;locus_tag=LDO50_RS26965;product=DUF3717 domain-containing protein;protein_id=WP_011881452.1;transl_table=11 NZ_CAJZAO010000350.1 RefSeq gene 25721 27256 . - . ID=gene-LDO50_RS26970;Name=LDO50_RS26970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26970;old_locus_tag=BVI1335_700031 NZ_CAJZAO010000350.1 Protein Homology CDS 25721 27256 . - 0 ID=cds-WP_041494079.1;Parent=gene-LDO50_RS26970;Dbxref=GenBank:WP_041494079.1;Name=WP_041494079.1;Ontology_term=GO:0006865;gbkey=CDS;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496062.1;locus_tag=LDO50_RS26970;product=amino acid permease;protein_id=WP_041494079.1;transl_table=11 NZ_CAJZAO010000350.1 RefSeq gene 27775 29307 . + . ID=gene-LDO50_RS26975;Name=LDO50_RS26975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26975;old_locus_tag=BVI1335_700032 NZ_CAJZAO010000350.1 Protein Homology CDS 27775 29307 . + 0 ID=cds-WP_045578219.1;Parent=gene-LDO50_RS26975;Dbxref=GenBank:WP_045578219.1;Name=WP_045578219.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548291.1;locus_tag=LDO50_RS26975;product=GGDEF domain-containing protein;protein_id=WP_045578219.1;transl_table=11 ##sequence-region NZ_CAJZAO010000351.1 1 25381 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000351.1 RefSeq region 1 25381 . + . ID=NZ_CAJZAO010000351.1:1..25381;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_71 NZ_CAJZAO010000351.1 RefSeq gene 168 956 . + . ID=gene-LDO50_RS26980;Name=LDO50_RS26980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26980;old_locus_tag=BVI1335_710002 NZ_CAJZAO010000351.1 Protein Homology CDS 168 956 . + 0 ID=cds-WP_014724604.1;Parent=gene-LDO50_RS26980;Dbxref=GenBank:WP_014724604.1;Name=WP_014724604.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089074.1;locus_tag=LDO50_RS26980;product=SDR family oxidoreductase;protein_id=WP_014724604.1;transl_table=11 NZ_CAJZAO010000351.1 RefSeq gene 992 2008 . + . ID=gene-LDO50_RS26985;Name=LDO50_RS26985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26985;old_locus_tag=BVI1335_710001 NZ_CAJZAO010000351.1 Protein Homology CDS 992 2008 . + 0 ID=cds-WP_014724605.1;Parent=gene-LDO50_RS26985;Dbxref=GenBank:WP_014724605.1;Name=WP_014724605.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255233.1;locus_tag=LDO50_RS26985;product=NADP-dependent oxidoreductase;protein_id=WP_014724605.1;transl_table=11 NZ_CAJZAO010000351.1 RefSeq gene 2311 3363 . - . ID=gene-LDO50_RS26990;Name=LDO50_RS26990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26990;old_locus_tag=BVI1335_710003 NZ_CAJZAO010000351.1 Protein Homology CDS 2311 3363 . - 0 ID=cds-WP_011881522.1;Parent=gene-LDO50_RS26990;Dbxref=GenBank:WP_011881522.1;Name=WP_011881522.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487821.1;locus_tag=LDO50_RS26990;product=AI-2E family transporter;protein_id=WP_011881522.1;transl_table=11 NZ_CAJZAO010000351.1 RefSeq gene 3593 4177 . - . ID=gene-LDO50_RS26995;Name=LDO50_RS26995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS26995;old_locus_tag=BVI1335_710004 NZ_CAJZAO010000351.1 Protein Homology CDS 3593 4177 . - 0 ID=cds-WP_034194961.1;Parent=gene-LDO50_RS26995;Dbxref=GenBank:WP_034194961.1;Name=WP_034194961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885032.1;locus_tag=LDO50_RS26995;product=BPSL1445 family SYLF domain-containing lipoprotein;protein_id=WP_034194961.1;transl_table=11 NZ_CAJZAO010000351.1 RefSeq gene 4230 4616 . - . ID=gene-LDO50_RS27000;Name=LDO50_RS27000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27000;old_locus_tag=BVI1335_710005 NZ_CAJZAO010000351.1 Protein Homology CDS 4230 4616 . - 0 ID=cds-WP_045578195.1;Parent=gene-LDO50_RS27000;Dbxref=GenBank:WP_045578195.1;Name=WP_045578195.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355880.1;locus_tag=LDO50_RS27000;product=DUF883 family protein;protein_id=WP_045578195.1;transl_table=11 NZ_CAJZAO010000351.1 RefSeq gene 5351 5704 . + . ID=gene-LDO50_RS27005;Name=LDO50_RS27005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27005;old_locus_tag=BVI1335_710007 NZ_CAJZAO010000351.1 Protein Homology CDS 5351 5704 . + 0 ID=cds-WP_011881526.1;Parent=gene-LDO50_RS27005;Dbxref=GenBank:WP_011881526.1;Name=WP_011881526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365581.1;locus_tag=LDO50_RS27005;product=YciI family protein;protein_id=WP_011881526.1;transl_table=11 NZ_CAJZAO010000351.1 RefSeq gene 5830 6252 . + . ID=gene-LDO50_RS27010;Name=LDO50_RS27010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27010;old_locus_tag=BVI1335_710008 NZ_CAJZAO010000351.1 Protein Homology CDS 5830 6252 . + 0 ID=cds-WP_011881527.1;Parent=gene-LDO50_RS27010;Dbxref=GenBank:WP_011881527.1;Name=WP_011881527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660448.1;locus_tag=LDO50_RS27010;product=YciI family protein;protein_id=WP_011881527.1;transl_table=11 NZ_CAJZAO010000351.1 RefSeq gene 6598 7854 . + . ID=gene-LDO50_RS27015;Name=LDO50_RS27015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27015;old_locus_tag=BVI1335_710010 NZ_CAJZAO010000351.1 Protein Homology CDS 6598 7854 . + 0 ID=cds-WP_034194964.1;Parent=gene-LDO50_RS27015;Dbxref=GenBank:WP_034194964.1;Name=WP_034194964.1;Ontology_term=GO:0016987;gbkey=CDS;go_function=sigma factor activity|0016987||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548203.1;locus_tag=LDO50_RS27015;product=RNA polymerase sigma factor;protein_id=WP_034194964.1;transl_table=11 NZ_CAJZAO010000351.1 RefSeq gene 8293 8718 . + . ID=gene-LDO50_RS27020;Name=LDO50_RS27020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27020;old_locus_tag=BVI1335_710012 NZ_CAJZAO010000351.1 GeneMarkS-2+ CDS 8293 8718 . + 0 ID=cds-WP_224020397.1;Parent=gene-LDO50_RS27020;Dbxref=GenBank:WP_224020397.1;Name=WP_224020397.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS27020;product=hypothetical protein;protein_id=WP_224020397.1;transl_table=11 NZ_CAJZAO010000351.1 RefSeq gene 9034 9987 . + . ID=gene-LDO50_RS27025;Name=LDO50_RS27025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27025;old_locus_tag=BVI1335_710014 NZ_CAJZAO010000351.1 Protein Homology CDS 9034 9987 . + 0 ID=cds-WP_014724610.1;Parent=gene-LDO50_RS27025;Dbxref=GenBank:WP_014724610.1;Name=WP_014724610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482942.1;locus_tag=LDO50_RS27025;product=transposase;protein_id=WP_014724610.1;transl_table=11 NZ_CAJZAO010000351.1 RefSeq gene 10115 11647 . - . ID=gene-LDO50_RS27030;Name=LDO50_RS27030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27030;old_locus_tag=BVI1335_710015 NZ_CAJZAO010000351.1 Protein Homology CDS 10115 11647 . - 0 ID=cds-WP_059458422.1;Parent=gene-LDO50_RS27030;Dbxref=GenBank:WP_059458422.1;Name=WP_059458422.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399386.1;locus_tag=LDO50_RS27030;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_059458422.1;transl_table=11 NZ_CAJZAO010000351.1 RefSeq gene 11770 12000 . - . ID=gene-LDO50_RS27035;Name=LDO50_RS27035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27035 NZ_CAJZAO010000351.1 GeneMarkS-2+ CDS 11770 12000 . - 0 ID=cds-WP_162486632.1;Parent=gene-LDO50_RS27035;Dbxref=GenBank:WP_162486632.1;Name=WP_162486632.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS27035;product=hypothetical protein;protein_id=WP_162486632.1;transl_table=11 NZ_CAJZAO010000351.1 RefSeq gene 12075 13448 . + . ID=gene-LDO50_RS27040;Name=LDO50_RS27040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27040;old_locus_tag=BVI1335_710016 NZ_CAJZAO010000351.1 Protein Homology CDS 12075 13448 . + 0 ID=cds-WP_011881533.1;Parent=gene-LDO50_RS27040;Dbxref=GenBank:WP_011881533.1;Name=WP_011881533.1;Ontology_term=GO:0016780;gbkey=CDS;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525082.1;locus_tag=LDO50_RS27040;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_011881533.1;transl_table=11 NZ_CAJZAO010000351.1 RefSeq gene 13515 14930 . + . ID=gene-LDO50_RS27045;Name=LDO50_RS27045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27045;old_locus_tag=BVI1335_710017 NZ_CAJZAO010000351.1 Protein Homology CDS 13515 14930 . + 0 ID=cds-WP_011881534.1;Parent=gene-LDO50_RS27045;Dbxref=GenBank:WP_011881534.1;Name=WP_011881534.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765450.1;locus_tag=LDO50_RS27045;product=UDP-glucose dehydrogenase family protein;protein_id=WP_011881534.1;transl_table=11 NZ_CAJZAO010000351.1 RefSeq gene 14968 15411 . + . ID=gene-LDO50_RS27050;Name=LDO50_RS27050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27050;old_locus_tag=BVI1335_710018 NZ_CAJZAO010000351.1 Protein Homology CDS 14968 15411 . + 0 ID=cds-WP_011881535.1;Parent=gene-LDO50_RS27050;Dbxref=GenBank:WP_011881535.1;Name=WP_011881535.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900072.1;locus_tag=LDO50_RS27050;product=low molecular weight protein-tyrosine-phosphatase;protein_id=WP_011881535.1;transl_table=11 NZ_CAJZAO010000351.1 RefSeq gene 15405 16583 . + . ID=gene-LDO50_RS27055;Name=LDO50_RS27055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27055;old_locus_tag=BVI1335_710019 NZ_CAJZAO010000351.1 Protein Homology CDS 15405 16583 . + 0 ID=cds-WP_059462387.1;Parent=gene-LDO50_RS27055;Dbxref=GenBank:WP_059462387.1;Name=WP_059462387.1;Ontology_term=GO:0015774,GO:0015159,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=polysaccharide transmembrane transporter activity|0015159||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009978106.1;locus_tag=LDO50_RS27055;product=polysaccharide biosynthesis/export family protein;protein_id=WP_059462387.1;transl_table=11 NZ_CAJZAO010000351.1 RefSeq gene 16634 18859 . + . ID=gene-LDO50_RS27060;Name=LDO50_RS27060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27060;old_locus_tag=BVI1335_710020 NZ_CAJZAO010000351.1 Protein Homology CDS 16634 18859 . + 0 ID=cds-WP_011881537.1;Parent=gene-LDO50_RS27060;Dbxref=GenBank:WP_011881537.1;Name=WP_011881537.1;Ontology_term=GO:0000271;gbkey=CDS;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765453.1;locus_tag=LDO50_RS27060;product=polysaccharide biosynthesis tyrosine autokinase;protein_id=WP_011881537.1;transl_table=11 NZ_CAJZAO010000351.1 RefSeq gene 18891 19850 . + . ID=gene-LDO50_RS27065;Name=LDO50_RS27065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27065;old_locus_tag=BVI1335_710021 NZ_CAJZAO010000351.1 Protein Homology CDS 18891 19850 . + 0 ID=cds-WP_046424626.1;Parent=gene-LDO50_RS27065;Dbxref=GenBank:WP_046424626.1;Name=WP_046424626.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482934.1;locus_tag=LDO50_RS27065;product=glycosyltransferase family 2 protein;protein_id=WP_046424626.1;transl_table=11 NZ_CAJZAO010000351.1 RefSeq gene 19894 20988 . + . ID=gene-LDO50_RS27070;Name=LDO50_RS27070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27070;old_locus_tag=BVI1335_710022 NZ_CAJZAO010000351.1 Protein Homology CDS 19894 20988 . + 0 ID=cds-WP_224020398.1;Parent=gene-LDO50_RS27070;Dbxref=GenBank:WP_224020398.1;Name=WP_224020398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416882.1;locus_tag=LDO50_RS27070;product=glycosyltransferase;protein_id=WP_224020398.1;transl_table=11 NZ_CAJZAO010000351.1 RefSeq gene 20985 22451 . + . ID=gene-LDO50_RS27075;Name=LDO50_RS27075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27075;old_locus_tag=BVI1335_710023 NZ_CAJZAO010000351.1 Protein Homology CDS 20985 22451 . + 0 ID=cds-WP_059668954.1;Parent=gene-LDO50_RS27075;Dbxref=GenBank:WP_059668954.1;Name=WP_059668954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881540.1;locus_tag=LDO50_RS27075;product=glucose-6-phosphate isomerase;protein_id=WP_059668954.1;transl_table=11 NZ_CAJZAO010000351.1 RefSeq gene 22448 23635 . + . ID=gene-LDO50_RS27080;Name=LDO50_RS27080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27080;old_locus_tag=BVI1335_710024 NZ_CAJZAO010000351.1 Protein Homology CDS 22448 23635 . + 0 ID=cds-WP_014724616.1;Parent=gene-LDO50_RS27080;Dbxref=GenBank:WP_014724616.1;Name=WP_014724616.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881541.1;locus_tag=LDO50_RS27080;product=glycosyltransferase family 4 protein;protein_id=WP_014724616.1;transl_table=11 NZ_CAJZAO010000351.1 RefSeq gene 23735 24901 . + . ID=gene-LDO50_RS27085;Name=LDO50_RS27085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27085;old_locus_tag=BVI1335_710025 NZ_CAJZAO010000351.1 Protein Homology CDS 23735 24901 . + 0 ID=cds-WP_011881542.1;Parent=gene-LDO50_RS27085;Dbxref=GenBank:WP_011881542.1;Name=WP_011881542.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881542.1;locus_tag=LDO50_RS27085;product=glycosyltransferase family 4 protein;protein_id=WP_011881542.1;transl_table=11 NZ_CAJZAO010000351.1 RefSeq pseudogene 25051 25381 . - . ID=gene-LDO50_RS27090;Name=LDO50_RS27090;end_range=25381,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS27090;old_locus_tag=BVI1335_710026;partial=true;pseudo=true NZ_CAJZAO010000351.1 Protein Homology CDS 25051 25381 . - 1 ID=cds-LDO50_RS27090;Parent=gene-LDO50_RS27090;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=25381,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399402.1;locus_tag=LDO50_RS27090;partial=true;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000352.1 1 37921 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000352.1 RefSeq region 1 37921 . + . ID=NZ_CAJZAO010000352.1:1..37921;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_72 NZ_CAJZAO010000352.1 RefSeq gene 180 2152 . + . ID=gene-LDO50_RS27095;Name=LDO50_RS27095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27095;old_locus_tag=BVI1335_720002;partial=true;start_range=.,180 NZ_CAJZAO010000352.1 Protein Homology CDS 180 2152 . + 2 ID=cds-WP_443797878.1;Parent=gene-LDO50_RS27095;Dbxref=GenBank:WP_443797878.1;Name=WP_443797878.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363706.1;locus_tag=LDO50_RS27095;partial=true;product=FUSC family protein;protein_id=WP_443797878.1;start_range=.,180;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 2149 2352 . + . ID=gene-LDO50_RS27100;Name=LDO50_RS27100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27100;old_locus_tag=BVI1335_720003 NZ_CAJZAO010000352.1 Protein Homology CDS 2149 2352 . + 0 ID=cds-WP_011884507.1;Parent=gene-LDO50_RS27100;Dbxref=GenBank:WP_011884507.1;Name=WP_011884507.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891634.1;locus_tag=LDO50_RS27100;product=DUF1656 domain-containing protein;protein_id=WP_011884507.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 2365 3243 . + . ID=gene-LDO50_RS27105;Name=LDO50_RS27105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27105;old_locus_tag=BVI1335_720004 NZ_CAJZAO010000352.1 Protein Homology CDS 2365 3243 . + 0 ID=cds-WP_011884505.1;Parent=gene-LDO50_RS27105;Dbxref=GenBank:WP_011884505.1;Name=WP_011884505.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402108.1;locus_tag=LDO50_RS27105;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_011884505.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 3263 4927 . - . ID=gene-LDO50_RS27110;Name=LDO50_RS27110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27110;old_locus_tag=BVI1335_720005 NZ_CAJZAO010000352.1 Protein Homology CDS 3263 4927 . - 0 ID=cds-WP_011884503.1;Parent=gene-LDO50_RS27110;Dbxref=GenBank:WP_011884503.1;Name=WP_011884503.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545224.1;locus_tag=LDO50_RS27110;product=methyl-accepting chemotaxis protein;protein_id=WP_011884503.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 5332 6570 . + . ID=gene-LDO50_RS27115;Name=LDO50_RS27115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27115;old_locus_tag=BVI1335_720006 NZ_CAJZAO010000352.1 Protein Homology CDS 5332 6570 . + 0 ID=cds-WP_011884501.1;Parent=gene-LDO50_RS27115;Dbxref=GenBank:WP_011884501.1;Name=WP_011884501.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491594.1;locus_tag=LDO50_RS27115;product=MFS transporter;protein_id=WP_011884501.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 6637 7434 . - . ID=gene-LDO50_RS27120;Name=LDO50_RS27120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27120;old_locus_tag=BVI1335_720007 NZ_CAJZAO010000352.1 Protein Homology CDS 6637 7434 . - 0 ID=cds-WP_034193315.1;Parent=gene-LDO50_RS27120;Dbxref=GenBank:WP_034193315.1;Name=WP_034193315.1;Ontology_term=GO:0009116,GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490412.1;locus_tag=LDO50_RS27120;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WP_034193315.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 7431 9794 . - . ID=gene-LDO50_RS27125;Name=LDO50_RS27125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27125;old_locus_tag=BVI1335_720008 NZ_CAJZAO010000352.1 Protein Homology CDS 7431 9794 . - 0 ID=cds-WP_046428218.1;Parent=gene-LDO50_RS27125;Dbxref=GenBank:WP_046428218.1;Name=WP_046428218.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404978.1;locus_tag=LDO50_RS27125;product=UvrD-helicase domain-containing protein;protein_id=WP_046428218.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 10021 12888 . + . ID=gene-LDO50_RS27130;Name=LDO50_RS27130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27130;old_locus_tag=BVI1335_720009 NZ_CAJZAO010000352.1 Protein Homology CDS 10021 12888 . + 0 ID=cds-WP_041493813.1;Parent=gene-LDO50_RS27130;Dbxref=GenBank:WP_041493813.1;Name=WP_041493813.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026481.1;locus_tag=LDO50_RS27130;product=valine--tRNA ligase;protein_id=WP_041493813.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 12974 13858 . + . ID=gene-LDO50_RS27135;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=LDO50_RS27135;old_locus_tag=BVI1335_720010 NZ_CAJZAO010000352.1 Protein Homology CDS 12974 13858 . + 0 ID=cds-WP_011884488.1;Parent=gene-LDO50_RS27135;Dbxref=GenBank:WP_011884488.1;Name=WP_011884488.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402116.1;locus_tag=LDO50_RS27135;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_011884488.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 13908 14525 . - . ID=gene-LDO50_RS27140;Name=LDO50_RS27140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27140;old_locus_tag=BVI1335_720011 NZ_CAJZAO010000352.1 Protein Homology CDS 13908 14525 . - 0 ID=cds-WP_212164155.1;Parent=gene-LDO50_RS27140;Dbxref=GenBank:WP_212164155.1;Name=WP_212164155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490440.1;locus_tag=LDO50_RS27140;product=DUF4136 domain-containing protein;protein_id=WP_212164155.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 14563 16950 . - . ID=gene-LDO50_RS27145;Name=LDO50_RS27145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27145;old_locus_tag=BVI1335_720012 NZ_CAJZAO010000352.1 Protein Homology CDS 14563 16950 . - 0 ID=cds-WP_059888313.1;Parent=gene-LDO50_RS27145;Dbxref=GenBank:WP_059888313.1;Name=WP_059888313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328350.1;locus_tag=LDO50_RS27145;product=CHASE2 domain-containing protein;protein_id=WP_059888313.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 16961 18283 . - . ID=gene-LDO50_RS27150;Name=LDO50_RS27150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27150;old_locus_tag=BVI1335_720013 NZ_CAJZAO010000352.1 Protein Homology CDS 16961 18283 . - 0 ID=cds-WP_224020400.1;Parent=gene-LDO50_RS27150;Dbxref=GenBank:WP_224020400.1;Name=WP_224020400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332531.1;locus_tag=LDO50_RS27150;product=FecR family protein;protein_id=WP_224020400.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 18319 19023 . - . ID=gene-LDO50_RS27155;Name=LDO50_RS27155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27155;old_locus_tag=BVI1335_720014 NZ_CAJZAO010000352.1 Protein Homology CDS 18319 19023 . - 0 ID=cds-WP_011884479.1;Parent=gene-LDO50_RS27155;Dbxref=GenBank:WP_011884479.1;Name=WP_011884479.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193573.1;locus_tag=LDO50_RS27155;product=response regulator transcription factor;protein_id=WP_011884479.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 19303 19695 . - . ID=gene-LDO50_RS27160;Name=LDO50_RS27160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27160;old_locus_tag=BVI1335_720016 NZ_CAJZAO010000352.1 Protein Homology CDS 19303 19695 . - 0 ID=cds-WP_045579221.1;Parent=gene-LDO50_RS27160;Dbxref=GenBank:WP_045579221.1;Name=WP_045579221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545215.1;locus_tag=LDO50_RS27160;product=hypothetical protein;protein_id=WP_045579221.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 19911 20138 . - . ID=gene-LDO50_RS27165;Name=LDO50_RS27165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27165;old_locus_tag=BVI1335_720018 NZ_CAJZAO010000352.1 Protein Homology CDS 19911 20138 . - 0 ID=cds-WP_006753156.1;Parent=gene-LDO50_RS27165;Dbxref=GenBank:WP_006753156.1;Name=WP_006753156.1;Ontology_term=GO:0097163;gbkey=CDS;go_function=sulfur carrier activity|0097163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026473.1;locus_tag=LDO50_RS27165;product=sulfurtransferase TusA family protein;protein_id=WP_006753156.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 20556 21491 . - . ID=gene-LDO50_RS27170;Name=LDO50_RS27170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27170;old_locus_tag=BVI1335_720019 NZ_CAJZAO010000352.1 Protein Homology CDS 20556 21491 . - 0 ID=cds-WP_045579222.1;Parent=gene-LDO50_RS27170;Dbxref=GenBank:WP_045579222.1;Name=WP_045579222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545214.1;locus_tag=LDO50_RS27170;product=LysR family transcriptional regulator;protein_id=WP_045579222.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 21599 23119 . + . ID=gene-LDO50_RS27175;Name=LDO50_RS27175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27175;old_locus_tag=BVI1335_720020 NZ_CAJZAO010000352.1 Protein Homology CDS 21599 23119 . + 0 ID=cds-WP_011884470.1;Parent=gene-LDO50_RS27175;Dbxref=GenBank:WP_011884470.1;Name=WP_011884470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764544.1;locus_tag=LDO50_RS27175;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_011884470.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 23184 24068 . - . ID=gene-LDO50_RS27180;Name=LDO50_RS27180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27180;old_locus_tag=BVI1335_720021 NZ_CAJZAO010000352.1 Protein Homology CDS 23184 24068 . - 0 ID=cds-WP_014722874.1;Parent=gene-LDO50_RS27180;Dbxref=GenBank:WP_014722874.1;Name=WP_014722874.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497758.1;locus_tag=LDO50_RS27180;product=MurR/RpiR family transcriptional regulator;protein_id=WP_014722874.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 24326 25498 . - . ID=gene-LDO50_RS27185;Name=LDO50_RS27185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27185;old_locus_tag=BVI1335_720023 NZ_CAJZAO010000352.1 Protein Homology CDS 24326 25498 . - 0 ID=cds-WP_059462234.1;Parent=gene-LDO50_RS27185;Dbxref=GenBank:WP_059462234.1;Name=WP_059462234.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897275.1;locus_tag=LDO50_RS27185;product=Gfo/Idh/MocA family protein;protein_id=WP_059462234.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 25650 26663 . - . ID=gene-LDO50_RS27190;Name=LDO50_RS27190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27190;old_locus_tag=BVI1335_720024 NZ_CAJZAO010000352.1 Protein Homology CDS 25650 26663 . - 0 ID=cds-WP_011884463.1;Parent=gene-LDO50_RS27190;Dbxref=GenBank:WP_011884463.1;Name=WP_011884463.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656629.1;locus_tag=LDO50_RS27190;product=Gfo/Idh/MocA family protein;protein_id=WP_011884463.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 26792 27817 . - . ID=gene-LDO50_RS27195;Name=LDO50_RS27195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27195;old_locus_tag=BVI1335_720025 NZ_CAJZAO010000352.1 Protein Homology CDS 26792 27817 . - 0 ID=cds-WP_011884461.1;Parent=gene-LDO50_RS27195;Dbxref=GenBank:WP_011884461.1;Name=WP_011884461.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010098739.1;locus_tag=LDO50_RS27195;product=ABC transporter permease;protein_id=WP_011884461.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 27845 29419 . - . ID=gene-LDO50_RS27200;Name=LDO50_RS27200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27200;old_locus_tag=BVI1335_720026 NZ_CAJZAO010000352.1 Protein Homology CDS 27845 29419 . - 0 ID=cds-WP_224020399.1;Parent=gene-LDO50_RS27200;Dbxref=GenBank:WP_224020399.1;Name=WP_224020399.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363686.1;locus_tag=LDO50_RS27200;product=sugar ABC transporter ATP-binding protein;protein_id=WP_224020399.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 29488 30414 . - . ID=gene-LDO50_RS27205;Name=LDO50_RS27205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27205;old_locus_tag=BVI1335_720027 NZ_CAJZAO010000352.1 Protein Homology CDS 29488 30414 . - 0 ID=cds-WP_011884459.1;Parent=gene-LDO50_RS27205;Dbxref=GenBank:WP_011884459.1;Name=WP_011884459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213578.1;locus_tag=LDO50_RS27205;product=sugar ABC transporter substrate-binding protein;protein_id=WP_011884459.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 30730 32685 . + . ID=gene-LDO50_RS27210;Name=LDO50_RS27210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27210;old_locus_tag=BVI1335_720028 NZ_CAJZAO010000352.1 Protein Homology CDS 30730 32685 . + 0 ID=cds-WP_059462886.1;Parent=gene-LDO50_RS27210;Dbxref=GenBank:WP_059462886.1;Name=WP_059462886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897282.1;locus_tag=LDO50_RS27210;product=bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2-deoxyphosphogluconate aldolase;protein_id=WP_059462886.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 32774 34657 . + . ID=gene-LDO50_RS27215;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=protein_coding;locus_tag=LDO50_RS27215;old_locus_tag=BVI1335_720029 NZ_CAJZAO010000352.1 Protein Homology CDS 32774 34657 . + 0 ID=cds-WP_212164157.1;Parent=gene-LDO50_RS27215;Dbxref=GenBank:WP_212164157.1;Name=WP_212164157.1;Ontology_term=GO:0019310,GO:0016823,GO:0030976;gbkey=CDS;gene=iolD;go_function=hydrolase activity%2C acting on acid carbon-carbon bonds%2C in ketonic substances|0016823||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363683.1;locus_tag=LDO50_RS27215;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=WP_212164157.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 34718 35647 . + . ID=gene-LDO50_RS27220;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=LDO50_RS27220;old_locus_tag=BVI1335_720030 NZ_CAJZAO010000352.1 Protein Homology CDS 34718 35647 . + 0 ID=cds-WP_014722869.1;Parent=gene-LDO50_RS27220;Dbxref=GenBank:WP_014722869.1;Name=WP_014722869.1;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328343.1;locus_tag=LDO50_RS27220;product=myo-inosose-2 dehydratase;protein_id=WP_014722869.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 35693 36511 . + . ID=gene-LDO50_RS27225;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=LDO50_RS27225;old_locus_tag=BVI1335_720031 NZ_CAJZAO010000352.1 Protein Homology CDS 35693 36511 . + 0 ID=cds-WP_014722868.1;Parent=gene-LDO50_RS27225;Dbxref=GenBank:WP_014722868.1;Name=WP_014722868.1;Ontology_term=GO:0019310,GO:0016861;gbkey=CDS;gene=iolB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481608.1;locus_tag=LDO50_RS27225;product=5-deoxy-glucuronate isomerase;protein_id=WP_014722868.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 36627 36815 . + . ID=gene-LDO50_RS27230;Name=LDO50_RS27230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27230;old_locus_tag=BVI1335_720032 NZ_CAJZAO010000352.1 GeneMarkS-2+ CDS 36627 36815 . + 0 ID=cds-WP_014722867.1;Parent=gene-LDO50_RS27230;Dbxref=GenBank:WP_014722867.1;Name=WP_014722867.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS27230;product=hypothetical protein;protein_id=WP_014722867.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq gene 36863 37609 . - . ID=gene-LDO50_RS27235;Name=LDO50_RS27235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27235;old_locus_tag=BVI1335_720033 NZ_CAJZAO010000352.1 Protein Homology CDS 36863 37609 . - 0 ID=cds-WP_059623458.1;Parent=gene-LDO50_RS27235;Dbxref=GenBank:WP_059623458.1;Name=WP_059623458.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476236.1;locus_tag=LDO50_RS27235;product=glucose 1-dehydrogenase;protein_id=WP_059623458.1;transl_table=11 NZ_CAJZAO010000352.1 RefSeq pseudogene 37817 37921 . - . ID=gene-LDO50_RS27240;Name=LDO50_RS27240;end_range=37921,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS27240;partial=true;pseudo=true NZ_CAJZAO010000352.1 Protein Homology CDS 37817 37921 . - 0 ID=cds-LDO50_RS27240;Parent=gene-LDO50_RS27240;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=37921,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884439.1;locus_tag=LDO50_RS27240;partial=true;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000353.1 1 22664 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000353.1 RefSeq region 1 22664 . + . ID=NZ_CAJZAO010000353.1:1..22664;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_73 NZ_CAJZAO010000353.1 RefSeq gene 1 790 . - . ID=gene-LDO50_RS27245;Name=bla;gbkey=Gene;gene=bla;gene_biotype=protein_coding;locus_tag=LDO50_RS27245;partial=true;start_range=.,1 NZ_CAJZAO010000353.1 Protein Homology CDS 1 790 . - 0 ID=cds-WP_224020401.1;Parent=gene-LDO50_RS27245;Dbxref=GenBank:WP_224020401.1;Name=WP_224020401.1;Ontology_term=GO:0030655,GO:0046677,GO:0008800;gbkey=CDS;gene=bla;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366249.1;locus_tag=LDO50_RS27245;partial=true;product=class A beta-lactamase;protein_id=WP_224020401.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000353.1 RefSeq gene 1007 1867 . - . ID=gene-LDO50_RS27250;Name=LDO50_RS27250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27250;old_locus_tag=BVI1335_730002 NZ_CAJZAO010000353.1 Protein Homology CDS 1007 1867 . - 0 ID=cds-WP_014724749.1;Parent=gene-LDO50_RS27250;Dbxref=GenBank:WP_014724749.1;Name=WP_014724749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339846.1;locus_tag=LDO50_RS27250;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_014724749.1;transl_table=11 NZ_CAJZAO010000353.1 RefSeq gene 2399 3295 . + . ID=gene-LDO50_RS27255;Name=LDO50_RS27255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27255;old_locus_tag=BVI1335_730004 NZ_CAJZAO010000353.1 Protein Homology CDS 2399 3295 . + 0 ID=cds-WP_034195151.1;Parent=gene-LDO50_RS27255;Dbxref=GenBank:WP_034195151.1;Name=WP_034195151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756286.1;locus_tag=LDO50_RS27255;product=LysR substrate-binding domain-containing protein;protein_id=WP_034195151.1;transl_table=11 NZ_CAJZAO010000353.1 RefSeq gene 3349 3735 . + . ID=gene-LDO50_RS27260;Name=LDO50_RS27260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27260;old_locus_tag=BVI1335_730005 NZ_CAJZAO010000353.1 Protein Homology CDS 3349 3735 . + 0 ID=cds-WP_011882405.1;Parent=gene-LDO50_RS27260;Dbxref=GenBank:WP_011882405.1;Name=WP_011882405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659031.1;locus_tag=LDO50_RS27260;product=ester cyclase;protein_id=WP_011882405.1;transl_table=11 NZ_CAJZAO010000353.1 RefSeq gene 3791 4945 . - . ID=gene-LDO50_RS27265;Name=LDO50_RS27265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27265;old_locus_tag=BVI1335_730006 NZ_CAJZAO010000353.1 Protein Homology CDS 3791 4945 . - 0 ID=cds-WP_011882406.1;Parent=gene-LDO50_RS27265;Dbxref=GenBank:WP_011882406.1;Name=WP_011882406.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009907726.1;locus_tag=LDO50_RS27265;product=porin;protein_id=WP_011882406.1;transl_table=11 NZ_CAJZAO010000353.1 RefSeq gene 5335 6438 . + . ID=gene-LDO50_RS27270;Name=LDO50_RS27270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27270;old_locus_tag=BVI1335_730007 NZ_CAJZAO010000353.1 Protein Homology CDS 5335 6438 . + 0 ID=cds-WP_034195153.1;Parent=gene-LDO50_RS27270;Dbxref=GenBank:WP_034195153.1;Name=WP_034195153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409779.1;locus_tag=LDO50_RS27270;product=OpgC domain-containing protein;protein_id=WP_034195153.1;transl_table=11 NZ_CAJZAO010000353.1 RefSeq gene 6500 7420 . + . ID=gene-LDO50_RS27275;Name=LDO50_RS27275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27275;old_locus_tag=BVI1335_730008 NZ_CAJZAO010000353.1 Protein Homology CDS 6500 7420 . + 0 ID=cds-WP_034195154.1;Parent=gene-LDO50_RS27275;Dbxref=GenBank:WP_034195154.1;Name=WP_034195154.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198444.1;locus_tag=LDO50_RS27275;product=alpha/beta hydrolase;protein_id=WP_034195154.1;transl_table=11 NZ_CAJZAO010000353.1 RefSeq gene 7510 7842 . - . ID=gene-LDO50_RS27280;Name=LDO50_RS27280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27280;old_locus_tag=BVI1335_730009 NZ_CAJZAO010000353.1 Protein Homology CDS 7510 7842 . - 0 ID=cds-WP_060044528.1;Parent=gene-LDO50_RS27280;Dbxref=GenBank:WP_060044528.1;Name=WP_060044528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759807.1;locus_tag=LDO50_RS27280;product=cupin domain-containing protein;protein_id=WP_060044528.1;transl_table=11 NZ_CAJZAO010000353.1 RefSeq gene 7912 9390 . - . ID=gene-LDO50_RS27285;Name=LDO50_RS27285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27285;old_locus_tag=BVI1335_730010 NZ_CAJZAO010000353.1 Protein Homology CDS 7912 9390 . - 0 ID=cds-WP_224020402.1;Parent=gene-LDO50_RS27285;Dbxref=GenBank:WP_224020402.1;Name=WP_224020402.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882410.1;locus_tag=LDO50_RS27285;product=sensor domain-containing diguanylate cyclase;protein_id=WP_224020402.1;transl_table=11 NZ_CAJZAO010000353.1 RefSeq gene 9702 9971 . - . ID=gene-LDO50_RS27290;Name=LDO50_RS27290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27290;old_locus_tag=BVI1335_730012 NZ_CAJZAO010000353.1 Protein Homology CDS 9702 9971 . - 0 ID=cds-WP_224056530.1;Parent=gene-LDO50_RS27290;Dbxref=GenBank:WP_224056530.1;Name=WP_224056530.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882411.1;locus_tag=LDO50_RS27290;product=PAAR domain-containing protein;protein_id=WP_224056530.1;transl_table=11 NZ_CAJZAO010000353.1 RefSeq gene 10100 10741 . - . ID=gene-LDO50_RS27295;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=LDO50_RS27295;old_locus_tag=BVI1335_730013 NZ_CAJZAO010000353.1 Protein Homology CDS 10100 10741 . - 0 ID=cds-WP_059568411.1;Parent=gene-LDO50_RS27295;Dbxref=GenBank:WP_059568411.1;Name=WP_059568411.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882412.1;locus_tag=LDO50_RS27295;product=type VI secretion system lipoprotein TssJ;protein_id=WP_059568411.1;transl_table=11 NZ_CAJZAO010000353.1 RefSeq gene 10788 11804 . - . ID=gene-LDO50_RS27300;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=LDO50_RS27300;old_locus_tag=BVI1335_730014 NZ_CAJZAO010000353.1 Protein Homology CDS 10788 11804 . - 0 ID=cds-WP_011881747.1;Parent=gene-LDO50_RS27300;Dbxref=GenBank:WP_011881747.1;Name=WP_011881747.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881747.1;locus_tag=LDO50_RS27300;product=type VI secretion system baseplate subunit TssG;protein_id=WP_011881747.1;transl_table=11 NZ_CAJZAO010000353.1 RefSeq gene 11867 13681 . - . ID=gene-LDO50_RS27305;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LDO50_RS27305;old_locus_tag=BVI1335_730015 NZ_CAJZAO010000353.1 Protein Homology CDS 11867 13681 . - 0 ID=cds-WP_034195156.1;Parent=gene-LDO50_RS27305;Dbxref=GenBank:WP_034195156.1;Name=WP_034195156.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725199.1;locus_tag=LDO50_RS27305;product=type VI secretion system baseplate subunit TssF;protein_id=WP_034195156.1;transl_table=11 NZ_CAJZAO010000353.1 RefSeq gene 13698 17261 . - . ID=gene-LDO50_RS27310;Name=LDO50_RS27310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27310;old_locus_tag=BVI1335_730016 NZ_CAJZAO010000353.1 Protein Homology CDS 13698 17261 . - 0 ID=cds-WP_372586123.1;Parent=gene-LDO50_RS27310;Dbxref=GenBank:WP_372586123.1;Name=WP_372586123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881745.1;locus_tag=LDO50_RS27310;product=ImcF-related family protein;protein_id=WP_372586123.1;transl_table=11 NZ_CAJZAO010000353.1 RefSeq gene 17263 18423 . - . ID=gene-LDO50_RS27315;Name=LDO50_RS27315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27315;old_locus_tag=BVI1335_730017 NZ_CAJZAO010000353.1 Protein Homology CDS 17263 18423 . - 0 ID=cds-WP_011881744.1;Parent=gene-LDO50_RS27315;Dbxref=GenBank:WP_011881744.1;Name=WP_011881744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881744.1;locus_tag=LDO50_RS27315;product=hypothetical protein;protein_id=WP_011881744.1;transl_table=11 NZ_CAJZAO010000353.1 RefSeq gene 18458 19276 . - . ID=gene-LDO50_RS27320;Name=LDO50_RS27320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27320;old_locus_tag=BVI1335_730018 NZ_CAJZAO010000353.1 GeneMarkS-2+ CDS 18458 19276 . - 0 ID=cds-WP_124260072.1;Parent=gene-LDO50_RS27320;Dbxref=GenBank:WP_124260072.1;Name=WP_124260072.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS27320;product=hypothetical protein;protein_id=WP_124260072.1;transl_table=11 NZ_CAJZAO010000353.1 RefSeq gene 19309 21462 . - . ID=gene-LDO50_RS27325;Name=LDO50_RS27325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27325;old_locus_tag=BVI1335_730019 NZ_CAJZAO010000353.1 Protein Homology CDS 19309 21462 . - 0 ID=cds-WP_011881741.1;Parent=gene-LDO50_RS27325;Dbxref=GenBank:WP_011881741.1;Name=WP_011881741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881741.1;locus_tag=LDO50_RS27325;product=hypothetical protein;protein_id=WP_011881741.1;transl_table=11 NZ_CAJZAO010000353.1 RefSeq gene 21475 22664 . - . ID=gene-LDO50_RS27330;Name=LDO50_RS27330;end_range=22664,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27330;old_locus_tag=BVI1335_730021;partial=true NZ_CAJZAO010000353.1 Protein Homology CDS 21475 22664 . - 2 ID=cds-WP_224020403.1;Parent=gene-LDO50_RS27330;Dbxref=GenBank:WP_224020403.1;Name=WP_224020403.1;end_range=22664,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881740.1;locus_tag=LDO50_RS27330;partial=true;product=DUF2345 domain-containing protein;protein_id=WP_224020403.1;transl_table=11 ##sequence-region NZ_CAJZAO010000354.1 1 11652 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000354.1 RefSeq region 1 11652 . + . ID=NZ_CAJZAO010000354.1:1..11652;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_74 NZ_CAJZAO010000354.1 RefSeq gene 1 74 . - . ID=gene-LDO50_RS27335;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;gene_synonym=ybgT;locus_tag=LDO50_RS27335;partial=true;start_range=.,1 NZ_CAJZAO010000354.1 Protein Homology CDS 1 74 . - 0 ID=cds-WP_224020405.1;Parent=gene-LDO50_RS27335;Dbxref=GenBank:WP_224020405.1;Name=WP_224020405.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004550904.1;locus_tag=LDO50_RS27335;partial=true;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_224020405.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000354.1 RefSeq gene 129 1265 . - . ID=gene-LDO50_RS27340;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=LDO50_RS27340;old_locus_tag=BVI1335_740002 NZ_CAJZAO010000354.1 Protein Homology CDS 129 1265 . - 0 ID=cds-WP_011886081.1;Parent=gene-LDO50_RS27340;Dbxref=GenBank:WP_011886081.1;Name=WP_011886081.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010101549.1;locus_tag=LDO50_RS27340;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_011886081.1;transl_table=11 NZ_CAJZAO010000354.1 RefSeq gene 1297 2877 . - . ID=gene-LDO50_RS27345;Name=LDO50_RS27345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27345;old_locus_tag=BVI1335_740003 NZ_CAJZAO010000354.1 Protein Homology CDS 1297 2877 . - 0 ID=cds-WP_011886080.1;Parent=gene-LDO50_RS27345;Dbxref=GenBank:WP_011886080.1;Name=WP_011886080.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546257.1;locus_tag=LDO50_RS27345;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_011886080.1;transl_table=11 NZ_CAJZAO010000354.1 RefSeq gene 2867 3145 . - . ID=gene-LDO50_RS27350;Name=cydP;gbkey=Gene;gene=cydP;gene_biotype=protein_coding;locus_tag=LDO50_RS27350;old_locus_tag=BVI1335_740004 NZ_CAJZAO010000354.1 Protein Homology CDS 2867 3145 . - 0 ID=cds-WP_011886079.1;Parent=gene-LDO50_RS27350;Dbxref=GenBank:WP_011886079.1;Name=WP_011886079.1;gbkey=CDS;gene=cydP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414477.1;locus_tag=LDO50_RS27350;product=cytochrome oxidase putative small subunit CydP;protein_id=WP_011886079.1;transl_table=11 NZ_CAJZAO010000354.1 RefSeq gene 3485 4420 . - . ID=gene-LDO50_RS27355;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=LDO50_RS27355;old_locus_tag=BVI1335_740005 NZ_CAJZAO010000354.1 Protein Homology CDS 3485 4420 . - 0 ID=cds-WP_014723678.1;Parent=gene-LDO50_RS27355;Dbxref=GenBank:WP_014723678.1;Name=WP_014723678.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893111.1;locus_tag=LDO50_RS27355;product=RNA polymerase sigma factor RpoH;protein_id=WP_014723678.1;transl_table=11 NZ_CAJZAO010000354.1 RefSeq gene 4781 5350 . + . ID=gene-LDO50_RS27360;Name=LDO50_RS27360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27360;old_locus_tag=BVI1335_740006 NZ_CAJZAO010000354.1 Protein Homology CDS 4781 5350 . + 0 ID=cds-WP_011886077.1;Parent=gene-LDO50_RS27360;Dbxref=GenBank:WP_011886077.1;Name=WP_011886077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483740.1;locus_tag=LDO50_RS27360;product=acyloxyacyl hydrolase;protein_id=WP_011886077.1;transl_table=11 NZ_CAJZAO010000354.1 RefSeq gene 5396 5779 . + . ID=gene-LDO50_RS27365;Name=LDO50_RS27365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27365;old_locus_tag=BVI1335_740007 NZ_CAJZAO010000354.1 Protein Homology CDS 5396 5779 . + 0 ID=cds-WP_011886076.1;Parent=gene-LDO50_RS27365;Dbxref=GenBank:WP_011886076.1;Name=WP_011886076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723676.1;locus_tag=LDO50_RS27365;product=nuclear transport factor 2 family protein;protein_id=WP_011886076.1;transl_table=11 NZ_CAJZAO010000354.1 RefSeq gene 5920 7566 . - . ID=gene-LDO50_RS27370;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=LDO50_RS27370;old_locus_tag=BVI1335_740009 NZ_CAJZAO010000354.1 Protein Homology CDS 5920 7566 . - 0 ID=cds-WP_059668254.1;Parent=gene-LDO50_RS27370;Dbxref=GenBank:WP_059668254.1;Name=WP_059668254.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254946.1;locus_tag=LDO50_RS27370;product=2-isopropylmalate synthase;protein_id=WP_059668254.1;transl_table=11 NZ_CAJZAO010000354.1 RefSeq gene 8015 8992 . - . ID=gene-LDO50_RS27375;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=LDO50_RS27375;old_locus_tag=BVI1335_740010 NZ_CAJZAO010000354.1 Protein Homology CDS 8015 8992 . - 0 ID=cds-WP_212197659.1;Parent=gene-LDO50_RS27375;Dbxref=GenBank:WP_212197659.1;Name=WP_212197659.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329250.1;locus_tag=LDO50_RS27375;product=DNA-binding protein YbiB;protein_id=WP_212197659.1;transl_table=11 NZ_CAJZAO010000354.1 RefSeq gene 9187 9831 . + . ID=gene-LDO50_RS27380;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=LDO50_RS27380;old_locus_tag=BVI1335_740011 NZ_CAJZAO010000354.1 Protein Homology CDS 9187 9831 . + 0 ID=cds-WP_011886073.1;Parent=gene-LDO50_RS27380;Dbxref=GenBank:WP_011886073.1;Name=WP_011886073.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034,GO:0005737;gbkey=CDS;gene=maiA;go_component=cytoplasm|0005737||IEA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,L-tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009902749.1;locus_tag=LDO50_RS27380;product=maleylacetoacetate isomerase;protein_id=WP_011886073.1;transl_table=11 NZ_CAJZAO010000354.1 RefSeq gene 9916 11049 . - . ID=gene-LDO50_RS27385;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=LDO50_RS27385;old_locus_tag=BVI1335_740012 NZ_CAJZAO010000354.1 Protein Homology CDS 9916 11049 . - 0 ID=cds-WP_011886072.1;Parent=gene-LDO50_RS27385;Dbxref=GenBank:WP_011886072.1;Name=WP_011886072.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195253.1;locus_tag=LDO50_RS27385;product=signal recognition particle-docking protein FtsY;protein_id=WP_011886072.1;transl_table=11 NZ_CAJZAO010000354.1 RefSeq gene 11251 11517 . + . ID=gene-LDO50_RS27390;Name=LDO50_RS27390;end_range=11517,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27390;partial=true NZ_CAJZAO010000354.1 Protein Homology CDS 11251 11517 . + 0 ID=cds-WP_443797879.1;Parent=gene-LDO50_RS27390;Dbxref=GenBank:WP_443797879.1;Name=WP_443797879.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;end_range=11517,.;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601291.1;locus_tag=LDO50_RS27390;partial=true;product=RsmD family RNA methyltransferase;protein_id=WP_443797879.1;transl_table=11 NZ_CAJZAO010000354.1 RefSeq pseudogene 11528 11652 . + . ID=gene-LDO50_RS32095;Name=LDO50_RS32095;end_range=11652,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS32095;partial=true;pseudo=true;start_range=.,11528 NZ_CAJZAO010000354.1 Protein Homology CDS 11528 11652 . + 1 ID=cds-LDO50_RS32095;Parent=gene-LDO50_RS32095;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=11652,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760400.1;locus_tag=LDO50_RS32095;partial=true;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;pseudo=true;start_range=.,11528;transl_table=11 ##sequence-region NZ_CAJZAO010000355.1 1 62537 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000355.1 RefSeq region 1 62537 . + . ID=NZ_CAJZAO010000355.1:1..62537;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_75 NZ_CAJZAO010000355.1 RefSeq gene 55 420 . + . ID=gene-LDO50_RS27395;Name=LDO50_RS27395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27395;old_locus_tag=BVI1335_750001 NZ_CAJZAO010000355.1 Protein Homology CDS 55 420 . + 0 ID=cds-WP_176295741.1;Parent=gene-LDO50_RS27395;Dbxref=GenBank:WP_176295741.1;Name=WP_176295741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879884.1;locus_tag=LDO50_RS27395;product=DUF3022 domain-containing protein;protein_id=WP_176295741.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 656 1204 . + . ID=gene-LDO50_RS27400;Name=LDO50_RS27400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27400;old_locus_tag=BVI1335_750002 NZ_CAJZAO010000355.1 Protein Homology CDS 656 1204 . + 0 ID=cds-WP_014725703.1;Parent=gene-LDO50_RS27400;Dbxref=GenBank:WP_014725703.1;Name=WP_014725703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660511.1;locus_tag=LDO50_RS27400;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_014725703.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 1208 1546 . + . ID=gene-LDO50_RS27405;Name=LDO50_RS27405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27405;old_locus_tag=BVI1335_750003 NZ_CAJZAO010000355.1 Protein Homology CDS 1208 1546 . + 0 ID=cds-WP_059459640.1;Parent=gene-LDO50_RS27405;Dbxref=GenBank:WP_059459640.1;Name=WP_059459640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879886.1;locus_tag=LDO50_RS27405;product=DUF1488 domain-containing protein;protein_id=WP_059459640.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 1831 2055 . + . ID=gene-LDO50_RS27410;Name=LDO50_RS27410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27410 NZ_CAJZAO010000355.1 Protein Homology CDS 1831 2055 . + 0 ID=cds-WP_045579571.1;Parent=gene-LDO50_RS27410;Dbxref=GenBank:WP_045579571.1;Name=WP_045579571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725705.1;locus_tag=LDO50_RS27410;product=hypothetical protein;protein_id=WP_045579571.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 2086 3336 . - . ID=gene-LDO50_RS27415;Name=LDO50_RS27415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27415;old_locus_tag=BVI1335_750005 NZ_CAJZAO010000355.1 Protein Homology CDS 2086 3336 . - 0 ID=cds-WP_059459639.1;Parent=gene-LDO50_RS27415;Dbxref=GenBank:WP_059459639.1;Name=WP_059459639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398950.1;locus_tag=LDO50_RS27415;product=phosphatidylserine decarboxylase family protein;protein_id=WP_059459639.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 3456 3707 . + . ID=gene-LDO50_RS27420;Name=LDO50_RS27420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27420;old_locus_tag=BVI1335_750006 NZ_CAJZAO010000355.1 Protein Homology CDS 3456 3707 . + 0 ID=cds-WP_224020406.1;Parent=gene-LDO50_RS27420;Dbxref=GenBank:WP_224020406.1;Name=WP_224020406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879889.1;locus_tag=LDO50_RS27420;product=hypothetical protein;protein_id=WP_224020406.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 3977 6718 . + . ID=gene-LDO50_RS27425;Name=LDO50_RS27425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27425;old_locus_tag=BVI1335_750007 NZ_CAJZAO010000355.1 Protein Homology CDS 3977 6718 . + 0 ID=cds-WP_224020407.1;Parent=gene-LDO50_RS27425;Dbxref=GenBank:WP_224020407.1;Name=WP_224020407.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879890.1;locus_tag=LDO50_RS27425;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_224020407.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 6761 7015 . - . ID=gene-LDO50_RS27430;Name=LDO50_RS27430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27430;old_locus_tag=BVI1335_750008 NZ_CAJZAO010000355.1 GeneMarkS-2+ CDS 6761 7015 . - 0 ID=cds-WP_046427235.1;Parent=gene-LDO50_RS27430;Dbxref=GenBank:WP_046427235.1;Name=WP_046427235.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS27430;product=hypothetical protein;protein_id=WP_046427235.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 7127 7234 . - . ID=gene-LDO50_RS30915;Name=LDO50_RS30915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30915;old_locus_tag=BVI1335_750009 NZ_CAJZAO010000355.1 GeneMarkS-2+ CDS 7127 7234 . - 0 ID=cds-WP_140993168.1;Parent=gene-LDO50_RS30915;Dbxref=GenBank:WP_140993168.1;Name=WP_140993168.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS30915;product=MFS transporter;protein_id=WP_140993168.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 7840 8181 . + . ID=gene-LDO50_RS27435;Name=LDO50_RS27435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27435;old_locus_tag=BVI1335_750011 NZ_CAJZAO010000355.1 GeneMarkS-2+ CDS 7840 8181 . + 0 ID=cds-WP_124259990.1;Parent=gene-LDO50_RS27435;Dbxref=GenBank:WP_124259990.1;Name=WP_124259990.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS27435;product=hypothetical protein;protein_id=WP_124259990.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 8928 9221 . - . ID=gene-LDO50_RS27440;Name=LDO50_RS27440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27440;old_locus_tag=BVI1335_750013 NZ_CAJZAO010000355.1 Protein Homology CDS 8928 9221 . - 0 ID=cds-WP_224020408.1;Parent=gene-LDO50_RS27440;Dbxref=GenBank:WP_224020408.1;Name=WP_224020408.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762295.1;locus_tag=LDO50_RS27440;product=H-NS histone family protein;protein_id=WP_224020408.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 9924 10490 . + . ID=gene-LDO50_RS27445;Name=LDO50_RS27445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27445;old_locus_tag=BVI1335_750016 NZ_CAJZAO010000355.1 Protein Homology CDS 9924 10490 . + 0 ID=cds-WP_106919370.1;Parent=gene-LDO50_RS27445;Dbxref=GenBank:WP_106919370.1;Name=WP_106919370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879892.1;locus_tag=LDO50_RS27445;product=hypothetical protein;protein_id=WP_106919370.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 10557 11207 . - . ID=gene-LDO50_RS27450;Name=LDO50_RS27450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27450;old_locus_tag=BVI1335_750018 NZ_CAJZAO010000355.1 Protein Homology CDS 10557 11207 . - 0 ID=cds-WP_046427237.1;Parent=gene-LDO50_RS27450;Dbxref=GenBank:WP_046427237.1;Name=WP_046427237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198159.1;locus_tag=LDO50_RS27450;product=acyl-homoserine-lactone synthase;protein_id=WP_046427237.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 11445 12149 . - . ID=gene-LDO50_RS27455;Name=LDO50_RS27455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27455;old_locus_tag=BVI1335_750019 NZ_CAJZAO010000355.1 Protein Homology CDS 11445 12149 . - 0 ID=cds-WP_224020409.1;Parent=gene-LDO50_RS27455;Dbxref=GenBank:WP_224020409.1;Name=WP_224020409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879894.1;locus_tag=LDO50_RS27455;product=autoinducer binding domain-containing protein;protein_id=WP_224020409.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 12495 13421 . - . ID=gene-LDO50_RS27460;Name=LDO50_RS27460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27460;old_locus_tag=BVI1335_750021 NZ_CAJZAO010000355.1 Protein Homology CDS 12495 13421 . - 0 ID=cds-WP_011879895.1;Parent=gene-LDO50_RS27460;Dbxref=GenBank:WP_011879895.1;Name=WP_011879895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879895.1;locus_tag=LDO50_RS27460;product=3-oxoacyl-ACP synthase;protein_id=WP_011879895.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 13418 14458 . - . ID=gene-LDO50_RS27465;Name=LDO50_RS27465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27465;old_locus_tag=BVI1335_750022 NZ_CAJZAO010000355.1 GeneMarkS-2+ CDS 13418 14458 . - 0 ID=cds-WP_224020410.1;Parent=gene-LDO50_RS27465;Dbxref=GenBank:WP_224020410.1;Name=WP_224020410.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS27465;product=3-oxoacyl-ACP synthase;protein_id=WP_224020410.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 14455 15006 . - . ID=gene-LDO50_RS27470;Name=LDO50_RS27470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27470 NZ_CAJZAO010000355.1 Protein Homology CDS 14455 15006 . - 0 ID=cds-WP_224020411.1;Parent=gene-LDO50_RS27470;Dbxref=GenBank:WP_224020411.1;Name=WP_224020411.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879897.1;locus_tag=LDO50_RS27470;product=GNAT family N-acetyltransferase;protein_id=WP_224020411.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 15045 16154 . - . ID=gene-LDO50_RS27475;Name=LDO50_RS27475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27475;old_locus_tag=BVI1335_750024 NZ_CAJZAO010000355.1 Protein Homology CDS 15045 16154 . - 0 ID=cds-WP_224020412.1;Parent=gene-LDO50_RS27475;Dbxref=GenBank:WP_224020412.1;Name=WP_224020412.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879898.1;locus_tag=LDO50_RS27475;product=acyl-CoA dehydrogenase family protein;protein_id=WP_224020412.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 16182 17390 . - . ID=gene-LDO50_RS27480;Name=LDO50_RS27480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27480;old_locus_tag=BVI1335_750025 NZ_CAJZAO010000355.1 Protein Homology CDS 16182 17390 . - 0 ID=cds-WP_224020413.1;Parent=gene-LDO50_RS27480;Dbxref=GenBank:WP_224020413.1;Name=WP_224020413.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879899.1;locus_tag=LDO50_RS27480;product=pyridoxal-dependent decarboxylase%2C exosortase A system-associated;protein_id=WP_224020413.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 17387 19006 . - . ID=gene-LDO50_RS27485;Name=LDO50_RS27485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27485;old_locus_tag=BVI1335_750026 NZ_CAJZAO010000355.1 Protein Homology CDS 17387 19006 . - 0 ID=cds-WP_224020414.1;Parent=gene-LDO50_RS27485;Dbxref=GenBank:WP_224020414.1;Name=WP_224020414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879900.1;locus_tag=LDO50_RS27485;product=acyl-CoA ligase (AMP-forming)%2C exosortase A system-associated;protein_id=WP_224020414.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 19057 20004 . - . ID=gene-LDO50_RS27490;Name=LDO50_RS27490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27490;old_locus_tag=BVI1335_750027 NZ_CAJZAO010000355.1 Protein Homology CDS 19057 20004 . - 0 ID=cds-WP_011879901.1;Parent=gene-LDO50_RS27490;Dbxref=GenBank:WP_011879901.1;Name=WP_011879901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879901.1;locus_tag=LDO50_RS27490;product=3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal domain-containing protein;protein_id=WP_011879901.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 20001 20900 . - . ID=gene-LDO50_RS27495;Name=LDO50_RS27495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27495;old_locus_tag=BVI1335_750028 NZ_CAJZAO010000355.1 Protein Homology CDS 20001 20900 . - 0 ID=cds-WP_224020415.1;Parent=gene-LDO50_RS27495;Dbxref=GenBank:WP_224020415.1;Name=WP_224020415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007179801.1;locus_tag=LDO50_RS27495;product=3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal domain-containing protein;protein_id=WP_224020415.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 21022 21300 . - . ID=gene-LDO50_RS27500;Name=LDO50_RS27500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27500;old_locus_tag=BVI1335_750029 NZ_CAJZAO010000355.1 Protein Homology CDS 21022 21300 . - 0 ID=cds-WP_011879903.1;Parent=gene-LDO50_RS27500;Dbxref=GenBank:WP_011879903.1;Name=WP_011879903.1;Ontology_term=GO:0006633,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879903.1;locus_tag=LDO50_RS27500;product=acyl carrier protein;protein_id=WP_011879903.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 21350 22591 . - . ID=gene-LDO50_RS27505;Name=LDO50_RS27505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27505;old_locus_tag=BVI1335_750030 NZ_CAJZAO010000355.1 Protein Homology CDS 21350 22591 . - 0 ID=cds-WP_011879904.1;Parent=gene-LDO50_RS27505;Dbxref=GenBank:WP_011879904.1;Name=WP_011879904.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879904.1;locus_tag=LDO50_RS27505;product=acyl-CoA dehydrogenase family protein;protein_id=WP_011879904.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 22824 23663 . + . ID=gene-LDO50_RS27510;Name=LDO50_RS27510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27510;old_locus_tag=BVI1335_750031 NZ_CAJZAO010000355.1 Protein Homology CDS 22824 23663 . + 0 ID=cds-WP_059720460.1;Parent=gene-LDO50_RS27510;Dbxref=GenBank:WP_059720460.1;Name=WP_059720460.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879905.1;locus_tag=LDO50_RS27510;product=FadR/GntR family transcriptional regulator;protein_id=WP_059720460.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 23696 24274 . - . ID=gene-LDO50_RS27515;Name=LDO50_RS27515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27515;old_locus_tag=BVI1335_750032 NZ_CAJZAO010000355.1 Protein Homology CDS 23696 24274 . - 0 ID=cds-WP_224020416.1;Parent=gene-LDO50_RS27515;Dbxref=GenBank:WP_224020416.1;Name=WP_224020416.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013584.7;locus_tag=LDO50_RS27515;product=amidase family protein;protein_id=WP_224020416.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 25134 25373 . - . ID=gene-LDO50_RS27520;Name=LDO50_RS27520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27520 NZ_CAJZAO010000355.1 Protein Homology CDS 25134 25373 . - 0 ID=cds-WP_043292608.1;Parent=gene-LDO50_RS27520;Dbxref=GenBank:WP_043292608.1;Name=WP_043292608.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751446.1;locus_tag=LDO50_RS27520;product=helix-turn-helix domain-containing protein;protein_id=WP_043292608.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 25630 26505 . + . ID=gene-LDO50_RS27525;Name=LDO50_RS27525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27525;old_locus_tag=BVI1335_750036 NZ_CAJZAO010000355.1 Protein Homology CDS 25630 26505 . + 0 ID=cds-WP_011879908.1;Parent=gene-LDO50_RS27525;Dbxref=GenBank:WP_011879908.1;Name=WP_011879908.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751447.1;locus_tag=LDO50_RS27525;product=branched-chain amino acid ABC transporter permease;protein_id=WP_011879908.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 26509 27582 . + . ID=gene-LDO50_RS27530;Name=LDO50_RS27530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27530;old_locus_tag=BVI1335_750037 NZ_CAJZAO010000355.1 Protein Homology CDS 26509 27582 . + 0 ID=cds-WP_059460728.1;Parent=gene-LDO50_RS27530;Dbxref=GenBank:WP_059460728.1;Name=WP_059460728.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879909.1;locus_tag=LDO50_RS27530;product=branched-chain amino acid ABC transporter permease;protein_id=WP_059460728.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 27582 28316 . + . ID=gene-LDO50_RS27535;Name=LDO50_RS27535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27535;old_locus_tag=BVI1335_750038 NZ_CAJZAO010000355.1 Protein Homology CDS 27582 28316 . + 0 ID=cds-WP_059475163.1;Parent=gene-LDO50_RS27535;Dbxref=GenBank:WP_059475163.1;Name=WP_059475163.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488423.1;locus_tag=LDO50_RS27535;product=ABC transporter ATP-binding protein;protein_id=WP_059475163.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 28303 29073 . + . ID=gene-LDO50_RS27540;Name=LDO50_RS27540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27540;old_locus_tag=BVI1335_750039 NZ_CAJZAO010000355.1 Protein Homology CDS 28303 29073 . + 0 ID=cds-WP_059475162.1;Parent=gene-LDO50_RS27540;Dbxref=GenBank:WP_059475162.1;Name=WP_059475162.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879911.1;locus_tag=LDO50_RS27540;product=ABC transporter ATP-binding protein;protein_id=WP_059475162.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 29082 30260 . + . ID=gene-LDO50_RS27545;Name=LDO50_RS27545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27545;old_locus_tag=BVI1335_750040 NZ_CAJZAO010000355.1 Protein Homology CDS 29082 30260 . + 0 ID=cds-WP_011879912.1;Parent=gene-LDO50_RS27545;Dbxref=GenBank:WP_011879912.1;Name=WP_011879912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007179791.1;locus_tag=LDO50_RS27545;product=ABC transporter substrate-binding protein;protein_id=WP_011879912.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 30313 31725 . + . ID=gene-LDO50_RS27550;Name=LDO50_RS27550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27550;old_locus_tag=BVI1335_750041 NZ_CAJZAO010000355.1 Protein Homology CDS 30313 31725 . + 0 ID=cds-WP_060044165.1;Parent=gene-LDO50_RS27550;Dbxref=GenBank:WP_060044165.1;Name=WP_060044165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879913.1;locus_tag=LDO50_RS27550;product=amidase family protein;protein_id=WP_060044165.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 31722 32276 . + . ID=gene-LDO50_RS27555;Name=LDO50_RS27555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27555;old_locus_tag=BVI1335_750043 NZ_CAJZAO010000355.1 Protein Homology CDS 31722 32276 . + 0 ID=cds-WP_045579582.1;Parent=gene-LDO50_RS27555;Dbxref=GenBank:WP_045579582.1;Name=WP_045579582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879914.1;locus_tag=LDO50_RS27555;product=amino acid synthesis family protein;protein_id=WP_045579582.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 32338 33375 . + . ID=gene-LDO50_RS27560;Name=LDO50_RS27560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27560;old_locus_tag=BVI1335_750044 NZ_CAJZAO010000355.1 Protein Homology CDS 32338 33375 . + 0 ID=cds-WP_011879915.1;Parent=gene-LDO50_RS27560;Dbxref=GenBank:WP_011879915.1;Name=WP_011879915.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879915.1;locus_tag=LDO50_RS27560;product=porin;protein_id=WP_011879915.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 33580 33981 . + . ID=gene-LDO50_RS27565;Name=LDO50_RS27565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27565;old_locus_tag=BVI1335_750045 NZ_CAJZAO010000355.1 Protein Homology CDS 33580 33981 . + 0 ID=cds-WP_224020417.1;Parent=gene-LDO50_RS27565;Dbxref=GenBank:WP_224020417.1;Name=WP_224020417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008918134.1;locus_tag=LDO50_RS27565;product=hypothetical protein;protein_id=WP_224020417.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 34263 34514 . + . ID=gene-LDO50_RS27570;Name=LDO50_RS27570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27570 NZ_CAJZAO010000355.1 Protein Homology CDS 34263 34514 . + 0 ID=cds-WP_011879917.1;Parent=gene-LDO50_RS27570;Dbxref=GenBank:WP_011879917.1;Name=WP_011879917.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879917.1;locus_tag=LDO50_RS27570;product=helix-turn-helix transcriptional regulator;protein_id=WP_011879917.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 34492 34794 . + . ID=gene-LDO50_RS32100;Name=LDO50_RS32100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS32100;old_locus_tag=BVI1335_750046 NZ_CAJZAO010000355.1 Protein Homology CDS 34492 34794 . + 0 ID=cds-WP_227893111.1;Parent=gene-LDO50_RS32100;Dbxref=GenBank:WP_227893111.1;Name=WP_227893111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879918.1;locus_tag=LDO50_RS32100;product=hypothetical protein;protein_id=WP_227893111.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 35267 36112 . + . ID=gene-LDO50_RS27575;Name=LDO50_RS27575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27575;old_locus_tag=BVI1335_750047 NZ_CAJZAO010000355.1 Protein Homology CDS 35267 36112 . + 0 ID=cds-WP_224020418.1;Parent=gene-LDO50_RS27575;Dbxref=GenBank:WP_224020418.1;Name=WP_224020418.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF013793.6;locus_tag=LDO50_RS27575;product=ParA family protein;protein_id=WP_224020418.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 36470 37147 . + . ID=gene-LDO50_RS27585;Name=LDO50_RS27585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27585;old_locus_tag=BVI1335_750049 NZ_CAJZAO010000355.1 Protein Homology CDS 36470 37147 . + 0 ID=cds-WP_045579583.1;Parent=gene-LDO50_RS27585;Dbxref=GenBank:WP_045579583.1;Name=WP_045579583.1;Ontology_term=GO:0043684;gbkey=CDS;go_component=type IV secretion system complex|0043684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879921.1;locus_tag=LDO50_RS27585;product=lytic transglycosylase domain-containing protein;protein_id=WP_045579583.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 37195 37536 . + . ID=gene-LDO50_RS27590;Name=LDO50_RS27590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27590;old_locus_tag=BVI1335_750050 NZ_CAJZAO010000355.1 Protein Homology CDS 37195 37536 . + 0 ID=cds-WP_045579584.1;Parent=gene-LDO50_RS27590;Dbxref=GenBank:WP_045579584.1;Name=WP_045579584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879922.1;locus_tag=LDO50_RS27590;product=TrbC/VirB2 family protein;protein_id=WP_045579584.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 37553 37873 . + . ID=gene-LDO50_RS27595;Name=LDO50_RS27595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27595;old_locus_tag=BVI1335_750051 NZ_CAJZAO010000355.1 Protein Homology CDS 37553 37873 . + 0 ID=cds-WP_011879923.1;Parent=gene-LDO50_RS27595;Dbxref=GenBank:WP_011879923.1;Name=WP_011879923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879923.1;locus_tag=LDO50_RS27595;product=type IV secretion system protein VirB3;protein_id=WP_011879923.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 37875 40343 . + . ID=gene-LDO50_RS27600;Name=LDO50_RS27600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27600;old_locus_tag=BVI1335_750052 NZ_CAJZAO010000355.1 Protein Homology CDS 37875 40343 . + 0 ID=cds-WP_059475159.1;Parent=gene-LDO50_RS27600;Dbxref=GenBank:WP_059475159.1;Name=WP_059475159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879924.1;locus_tag=LDO50_RS27600;product=VirB4 family type IV secretion/conjugal transfer ATPase;protein_id=WP_059475159.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 40340 41503 . + . ID=gene-LDO50_RS27605;Name=LDO50_RS27605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27605;old_locus_tag=BVI1335_750053 NZ_CAJZAO010000355.1 Protein Homology CDS 40340 41503 . + 0 ID=cds-WP_045579586.1;Parent=gene-LDO50_RS27605;Dbxref=GenBank:WP_045579586.1;Name=WP_045579586.1;Ontology_term=GO:0030255;gbkey=CDS;go_process=protein secretion by the type IV secretion system|0030255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879925.1;locus_tag=LDO50_RS27605;product=type IV secretion system protein;protein_id=WP_045579586.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 41520 42215 . + . ID=gene-LDO50_RS27610;Name=virB5;gbkey=Gene;gene=virB5;gene_biotype=protein_coding;locus_tag=LDO50_RS27610;old_locus_tag=BVI1335_750054 NZ_CAJZAO010000355.1 Protein Homology CDS 41520 42215 . + 0 ID=cds-WP_011879926.1;Parent=gene-LDO50_RS27610;Dbxref=GenBank:WP_011879926.1;Name=WP_011879926.1;Ontology_term=GO:0043684;gbkey=CDS;gene=virB5;go_component=type IV secretion system complex|0043684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879926.1;locus_tag=LDO50_RS27610;product=P-type DNA transfer protein VirB5;protein_id=WP_011879926.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 42425 43120 . + . ID=gene-LDO50_RS27615;Name=LDO50_RS27615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27615;old_locus_tag=BVI1335_750055 NZ_CAJZAO010000355.1 Protein Homology CDS 42425 43120 . + 0 ID=cds-WP_045579587.1;Parent=gene-LDO50_RS27615;Dbxref=GenBank:WP_045579587.1;Name=WP_045579587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879927.1;locus_tag=LDO50_RS27615;product=virB8 family protein;protein_id=WP_045579587.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 43117 43941 . + . ID=gene-LDO50_RS27620;Name=LDO50_RS27620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27620;old_locus_tag=BVI1335_750056 NZ_CAJZAO010000355.1 Protein Homology CDS 43117 43941 . + 0 ID=cds-WP_045579588.1;Parent=gene-LDO50_RS27620;Dbxref=GenBank:WP_045579588.1;Name=WP_045579588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879928.1;locus_tag=LDO50_RS27620;product=TrbG/VirB9 family P-type conjugative transfer protein;protein_id=WP_045579588.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 43934 45160 . + . ID=gene-LDO50_RS27625;Name=virB10;gbkey=Gene;gene=virB10;gene_biotype=protein_coding;locus_tag=LDO50_RS27625 NZ_CAJZAO010000355.1 Protein Homology CDS 43934 45160 . + 0 ID=cds-WP_045579589.1;Parent=gene-LDO50_RS27625;Dbxref=GenBank:WP_045579589.1;Name=WP_045579589.1;gbkey=CDS;gene=virB10;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879929.1;locus_tag=LDO50_RS27625;product=type IV secretion system protein VirB10;protein_id=WP_045579589.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 45157 46275 . + . ID=gene-LDO50_RS27630;Name=virB11;gbkey=Gene;gene=virB11;gene_biotype=protein_coding;locus_tag=LDO50_RS27630;old_locus_tag=BVI1335_750058 NZ_CAJZAO010000355.1 Protein Homology CDS 45157 46275 . + 0 ID=cds-WP_011879930.1;Parent=gene-LDO50_RS27630;Dbxref=GenBank:WP_011879930.1;Name=WP_011879930.1;Ontology_term=GO:0044097,GO:0043684;gbkey=CDS;gene=virB11;go_component=type IV secretion system complex|0043684||IEA;go_process=secretion by the type IV secretion system|0044097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879930.1;locus_tag=LDO50_RS27630;product=P-type DNA transfer ATPase VirB11;protein_id=WP_011879930.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 46285 46659 . + . ID=gene-LDO50_RS27635;Name=LDO50_RS27635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27635;old_locus_tag=BVI1335_750059 NZ_CAJZAO010000355.1 Protein Homology CDS 46285 46659 . + 0 ID=cds-WP_011879931.1;Parent=gene-LDO50_RS27635;Dbxref=GenBank:WP_011879931.1;Name=WP_011879931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879931.1;locus_tag=LDO50_RS27635;product=hypothetical protein;protein_id=WP_011879931.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 46656 48374 . + . ID=gene-LDO50_RS27640;Name=LDO50_RS27640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27640;old_locus_tag=BVI1335_750060 NZ_CAJZAO010000355.1 Protein Homology CDS 46656 48374 . + 0 ID=cds-WP_045579590.1;Parent=gene-LDO50_RS27640;Dbxref=GenBank:WP_045579590.1;Name=WP_045579590.1;Ontology_term=GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879932.1;locus_tag=LDO50_RS27640;product=type IV secretory system conjugative DNA transfer family protein;protein_id=WP_045579590.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 48371 50233 . + . ID=gene-LDO50_RS27645;Name=LDO50_RS27645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27645;old_locus_tag=BVI1335_750061 NZ_CAJZAO010000355.1 Protein Homology CDS 48371 50233 . + 0 ID=cds-WP_045579591.1;Parent=gene-LDO50_RS27645;Dbxref=GenBank:WP_045579591.1;Name=WP_045579591.1;Ontology_term=GO:0016817;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879933.1;locus_tag=LDO50_RS27645;product=PriCT-2 domain-containing protein;protein_id=WP_045579591.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 50290 51813 . + . ID=gene-LDO50_RS27650;Name=LDO50_RS27650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27650;old_locus_tag=BVI1335_750062 NZ_CAJZAO010000355.1 Protein Homology CDS 50290 51813 . + 0 ID=cds-WP_080484368.1;Parent=gene-LDO50_RS27650;Dbxref=GenBank:WP_080484368.1;Name=WP_080484368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879934.1;locus_tag=LDO50_RS27650;product=LPD7 domain-containing protein;protein_id=WP_080484368.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 51822 52358 . + . ID=gene-LDO50_RS27655;Name=LDO50_RS27655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27655 NZ_CAJZAO010000355.1 Protein Homology CDS 51822 52358 . + 0 ID=cds-WP_080484367.1;Parent=gene-LDO50_RS27655;Dbxref=GenBank:WP_080484367.1;Name=WP_080484367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879935.1;locus_tag=LDO50_RS27655;product=plasmid stabilization protein;protein_id=WP_080484367.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 52360 53364 . + . ID=gene-LDO50_RS27660;Name=LDO50_RS27660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27660;old_locus_tag=BVI1335_750064 NZ_CAJZAO010000355.1 Protein Homology CDS 52360 53364 . + 0 ID=cds-WP_059475157.1;Parent=gene-LDO50_RS27660;Dbxref=GenBank:WP_059475157.1;Name=WP_059475157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879936.1;locus_tag=LDO50_RS27660;product=relaxase/mobilization nuclease domain-containing protein;protein_id=WP_059475157.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 53614 54045 . - . ID=gene-LDO50_RS27665;Name=LDO50_RS27665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27665;old_locus_tag=BVI1335_750066 NZ_CAJZAO010000355.1 Protein Homology CDS 53614 54045 . - 0 ID=cds-WP_011879938.1;Parent=gene-LDO50_RS27665;Dbxref=GenBank:WP_011879938.1;Name=WP_011879938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879938.1;locus_tag=LDO50_RS27665;product=hypothetical protein;protein_id=WP_011879938.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 54314 54778 . - . ID=gene-LDO50_RS27670;Name=LDO50_RS27670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27670;old_locus_tag=BVI1335_750068 NZ_CAJZAO010000355.1 GeneMarkS-2+ CDS 54314 54778 . - 0 ID=cds-WP_144410679.1;Parent=gene-LDO50_RS27670;Dbxref=GenBank:WP_144410679.1;Name=WP_144410679.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS27670;product=hypothetical protein;protein_id=WP_144410679.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 55046 55507 . + . ID=gene-LDO50_RS27675;Name=LDO50_RS27675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27675;old_locus_tag=BVI1335_750069 NZ_CAJZAO010000355.1 Protein Homology CDS 55046 55507 . + 0 ID=cds-WP_224020419.1;Parent=gene-LDO50_RS27675;Dbxref=GenBank:WP_224020419.1;Name=WP_224020419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879940.1;locus_tag=LDO50_RS27675;product=hypothetical protein;protein_id=WP_224020419.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 55517 56209 . + . ID=gene-LDO50_RS27680;Name=LDO50_RS27680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27680;old_locus_tag=BVI1335_750070 NZ_CAJZAO010000355.1 Protein Homology CDS 55517 56209 . + 0 ID=cds-WP_011879941.1;Parent=gene-LDO50_RS27680;Dbxref=GenBank:WP_011879941.1;Name=WP_011879941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015002982.1;locus_tag=LDO50_RS27680;product=nucleotide-binding protein;protein_id=WP_011879941.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 56202 56876 . + . ID=gene-LDO50_RS27685;Name=LDO50_RS27685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27685;old_locus_tag=BVI1335_750071 NZ_CAJZAO010000355.1 Protein Homology CDS 56202 56876 . + 0 ID=cds-WP_011879942.1;Parent=gene-LDO50_RS27685;Dbxref=GenBank:WP_011879942.1;Name=WP_011879942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879942.1;locus_tag=LDO50_RS27685;product=hypothetical protein;protein_id=WP_011879942.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 56866 57537 . + . ID=gene-LDO50_RS27690;Name=LDO50_RS27690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27690 NZ_CAJZAO010000355.1 GeneMarkS-2+ CDS 56866 57537 . + 0 ID=cds-WP_155625226.1;Parent=gene-LDO50_RS27690;Dbxref=GenBank:WP_155625226.1;Name=WP_155625226.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS27690;product=hypothetical protein;protein_id=WP_155625226.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 57727 58560 . - . ID=gene-LDO50_RS27695;Name=LDO50_RS27695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27695;old_locus_tag=BVI1335_750073 NZ_CAJZAO010000355.1 Protein Homology CDS 57727 58560 . - 0 ID=cds-WP_224020420.1;Parent=gene-LDO50_RS27695;Dbxref=GenBank:WP_224020420.1;Name=WP_224020420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967235.1;locus_tag=LDO50_RS27695;product=DUF932 domain-containing protein;protein_id=WP_224020420.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 59143 60264 . - . ID=gene-LDO50_RS27700;Name=LDO50_RS27700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27700;old_locus_tag=BVI1335_750074 NZ_CAJZAO010000355.1 Protein Homology CDS 59143 60264 . - 0 ID=cds-WP_059991471.1;Parent=gene-LDO50_RS27700;Dbxref=GenBank:WP_059991471.1;Name=WP_059991471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879944.1;locus_tag=LDO50_RS27700;product=sensor histidine kinase;protein_id=WP_059991471.1;transl_table=11 NZ_CAJZAO010000355.1 RefSeq pseudogene 60494 61147 . - . ID=gene-LDO50_RS32105;Name=LDO50_RS32105;end_range=61147,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS32105;old_locus_tag=BVI1335_750075;partial=true;pseudo=true NZ_CAJZAO010000355.1 Protein Homology CDS 60494 61147 . - 0 ID=cds-LDO50_RS32105;Parent=gene-LDO50_RS32105;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=61147,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725714.1;locus_tag=LDO50_RS32105;partial=true;product=malto-oligosyltrehalose synthase;pseudo=true;transl_table=11 NZ_CAJZAO010000355.1 RefSeq gene 61296 62537 . - . ID=gene-LDO50_RS32110;Name=LDO50_RS32110;end_range=62537,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS32110;old_locus_tag=BVI1335_750077;partial=true;start_range=.,61296 NZ_CAJZAO010000355.1 Protein Homology CDS 61296 62537 . - 0 ID=cds-WP_443797880.1;Parent=gene-LDO50_RS32110;Dbxref=GenBank:WP_443797880.1;Name=WP_443797880.1;Ontology_term=GO:0005975,GO:0003824;end_range=62537,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534978.1;locus_tag=LDO50_RS32110;partial=true;product=alpha-amylase family glycosyl hydrolase;protein_id=WP_443797880.1;start_range=.,61296;transl_table=11 ##sequence-region NZ_CAJZAO010000356.1 1 23007 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000356.1 RefSeq region 1 23007 . + . ID=NZ_CAJZAO010000356.1:1..23007;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_76 NZ_CAJZAO010000356.1 RefSeq gene 1 360 . + . ID=gene-LDO50_RS27710;Name=LDO50_RS27710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27710;old_locus_tag=BVI1335_760001;partial=true;start_range=.,1 NZ_CAJZAO010000356.1 Protein Homology CDS 1 360 . + 0 ID=cds-WP_224020421.1;Parent=gene-LDO50_RS27710;Dbxref=GenBank:WP_224020421.1;Name=WP_224020421.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354223.1;locus_tag=LDO50_RS27710;partial=true;product=alpha/beta hydrolase fold domain-containing protein;protein_id=WP_224020421.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000356.1 RefSeq gene 383 1579 . + . ID=gene-LDO50_RS27715;Name=LDO50_RS27715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27715;old_locus_tag=BVI1335_760002 NZ_CAJZAO010000356.1 Protein Homology CDS 383 1579 . + 0 ID=cds-WP_176315573.1;Parent=gene-LDO50_RS27715;Dbxref=GenBank:WP_176315573.1;Name=WP_176315573.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756115.1;locus_tag=LDO50_RS27715;product=TauD/TfdA family dioxygenase;protein_id=WP_176315573.1;transl_table=11 NZ_CAJZAO010000356.1 RefSeq gene 1770 2072 . - . ID=gene-LDO50_RS27720;Name=LDO50_RS27720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27720;old_locus_tag=BVI1335_760003 NZ_CAJZAO010000356.1 Protein Homology CDS 1770 2072 . - 0 ID=cds-WP_011880741.1;Parent=gene-LDO50_RS27720;Dbxref=GenBank:WP_011880741.1;Name=WP_011880741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723947.1;locus_tag=LDO50_RS27720;product=DUF4148 domain-containing protein;protein_id=WP_011880741.1;transl_table=11 NZ_CAJZAO010000356.1 RefSeq gene 2426 2716 . - . ID=gene-LDO50_RS27725;Name=LDO50_RS27725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27725;old_locus_tag=BVI1335_760004 NZ_CAJZAO010000356.1 Protein Homology CDS 2426 2716 . - 0 ID=cds-WP_011880740.1;Parent=gene-LDO50_RS27725;Dbxref=GenBank:WP_011880740.1;Name=WP_011880740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547132.1;locus_tag=LDO50_RS27725;product=DUF3331 domain-containing protein;protein_id=WP_011880740.1;transl_table=11 NZ_CAJZAO010000356.1 RefSeq gene 3380 4144 . + . ID=gene-LDO50_RS27730;Name=LDO50_RS27730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27730;old_locus_tag=BVI1335_760007 NZ_CAJZAO010000356.1 Protein Homology CDS 3380 4144 . + 0 ID=cds-WP_011880739.1;Parent=gene-LDO50_RS27730;Dbxref=GenBank:WP_011880739.1;Name=WP_011880739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089736.1;locus_tag=LDO50_RS27730;product=SDR family oxidoreductase;protein_id=WP_011880739.1;transl_table=11 NZ_CAJZAO010000356.1 RefSeq gene 4196 5038 . + . ID=gene-LDO50_RS27735;Name=LDO50_RS27735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27735;old_locus_tag=BVI1335_760008 NZ_CAJZAO010000356.1 Protein Homology CDS 4196 5038 . + 0 ID=cds-WP_011880738.1;Parent=gene-LDO50_RS27735;Dbxref=GenBank:WP_011880738.1;Name=WP_011880738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898575.1;locus_tag=LDO50_RS27735;product=ureidoglycolate lyase;protein_id=WP_011880738.1;transl_table=11 NZ_CAJZAO010000356.1 RefSeq gene 5062 6339 . + . ID=gene-LDO50_RS27740;Name=LDO50_RS27740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27740;old_locus_tag=BVI1335_760006 NZ_CAJZAO010000356.1 Protein Homology CDS 5062 6339 . + 0 ID=cds-WP_034195480.1;Parent=gene-LDO50_RS27740;Dbxref=GenBank:WP_034195480.1;Name=WP_034195480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766342.1;locus_tag=LDO50_RS27740;product=L-fuconate dehydratase;protein_id=WP_034195480.1;transl_table=11 NZ_CAJZAO010000356.1 RefSeq gene 6423 7199 . + . ID=gene-LDO50_RS27745;Name=LDO50_RS27745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27745;old_locus_tag=BVI1335_760009 NZ_CAJZAO010000356.1 Protein Homology CDS 6423 7199 . + 0 ID=cds-WP_011880736.1;Parent=gene-LDO50_RS27745;Dbxref=GenBank:WP_011880736.1;Name=WP_011880736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880736.1;locus_tag=LDO50_RS27745;product=SDR family oxidoreductase;protein_id=WP_011880736.1;transl_table=11 NZ_CAJZAO010000356.1 RefSeq gene 7212 8756 . + . ID=gene-LDO50_RS27750;Name=LDO50_RS27750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27750;old_locus_tag=BVI1335_760011 NZ_CAJZAO010000356.1 Protein Homology CDS 7212 8756 . + 0 ID=cds-WP_224020422.1;Parent=gene-LDO50_RS27750;Dbxref=GenBank:WP_224020422.1;Name=WP_224020422.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898578.1;locus_tag=LDO50_RS27750;product=sugar ABC transporter ATP-binding protein;protein_id=WP_224020422.1;transl_table=11 NZ_CAJZAO010000356.1 RefSeq gene 8777 9814 . + . ID=gene-LDO50_RS27755;Name=LDO50_RS27755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27755;old_locus_tag=BVI1335_760010 NZ_CAJZAO010000356.1 Protein Homology CDS 8777 9814 . + 0 ID=cds-WP_011880734.1;Parent=gene-LDO50_RS27755;Dbxref=GenBank:WP_011880734.1;Name=WP_011880734.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498773.1;locus_tag=LDO50_RS27755;product=ABC transporter permease;protein_id=WP_011880734.1;transl_table=11 NZ_CAJZAO010000356.1 RefSeq gene 9904 10845 . + . ID=gene-LDO50_RS27760;Name=LDO50_RS27760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27760;old_locus_tag=BVI1335_760012 NZ_CAJZAO010000356.1 Protein Homology CDS 9904 10845 . + 0 ID=cds-WP_011880733.1;Parent=gene-LDO50_RS27760;Dbxref=GenBank:WP_011880733.1;Name=WP_011880733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339568.1;locus_tag=LDO50_RS27760;product=ABC transporter substrate-binding protein;protein_id=WP_011880733.1;transl_table=11 NZ_CAJZAO010000356.1 RefSeq gene 10909 11799 . + . ID=gene-LDO50_RS27765;Name=LDO50_RS27765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27765;old_locus_tag=BVI1335_760013 NZ_CAJZAO010000356.1 Protein Homology CDS 10909 11799 . + 0 ID=cds-WP_034195478.1;Parent=gene-LDO50_RS27765;Dbxref=GenBank:WP_034195478.1;Name=WP_034195478.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547138.1;locus_tag=LDO50_RS27765;product=amidohydrolase family protein;protein_id=WP_034195478.1;transl_table=11 NZ_CAJZAO010000356.1 RefSeq gene 11871 12632 . + . ID=gene-LDO50_RS27770;Name=LDO50_RS27770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27770;old_locus_tag=BVI1335_760014 NZ_CAJZAO010000356.1 Protein Homology CDS 11871 12632 . + 0 ID=cds-WP_045577740.1;Parent=gene-LDO50_RS27770;Dbxref=GenBank:WP_045577740.1;Name=WP_045577740.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756124.1;locus_tag=LDO50_RS27770;product=FadR/GntR family transcriptional regulator;protein_id=WP_045577740.1;transl_table=11 NZ_CAJZAO010000356.1 RefSeq gene 12649 13890 . - . ID=gene-LDO50_RS27775;Name=LDO50_RS27775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27775;old_locus_tag=BVI1335_760015 NZ_CAJZAO010000356.1 Protein Homology CDS 12649 13890 . - 0 ID=cds-WP_045577741.1;Parent=gene-LDO50_RS27775;Dbxref=GenBank:WP_045577741.1;Name=WP_045577741.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414028.1;locus_tag=LDO50_RS27775;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_045577741.1;transl_table=11 NZ_CAJZAO010000356.1 RefSeq gene 14304 15476 . + . ID=gene-LDO50_RS27780;Name=LDO50_RS27780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27780;old_locus_tag=BVI1335_760017 NZ_CAJZAO010000356.1 Protein Homology CDS 14304 15476 . + 0 ID=cds-WP_175994757.1;Parent=gene-LDO50_RS27780;Dbxref=GenBank:WP_175994757.1;Name=WP_175994757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484766.1;locus_tag=LDO50_RS27780;product=XRE family transcriptional regulator;protein_id=WP_175994757.1;transl_table=11 NZ_CAJZAO010000356.1 RefSeq gene 15473 15970 . + . ID=gene-LDO50_RS27785;Name=LDO50_RS27785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27785;old_locus_tag=BVI1335_760018 NZ_CAJZAO010000356.1 Protein Homology CDS 15473 15970 . + 0 ID=cds-WP_011880728.1;Parent=gene-LDO50_RS27785;Dbxref=GenBank:WP_011880728.1;Name=WP_011880728.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493518.1;locus_tag=LDO50_RS27785;product=PIN domain-containing protein;protein_id=WP_011880728.1;transl_table=11 NZ_CAJZAO010000356.1 RefSeq gene 16032 16589 . - . ID=gene-LDO50_RS27790;Name=LDO50_RS27790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27790;old_locus_tag=BVI1335_760020 NZ_CAJZAO010000356.1 Protein Homology CDS 16032 16589 . - 0 ID=cds-WP_175994755.1;Parent=gene-LDO50_RS27790;Dbxref=GenBank:WP_175994755.1;Name=WP_175994755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880727.1;locus_tag=LDO50_RS27790;product=hypothetical protein;protein_id=WP_175994755.1;transl_table=11 NZ_CAJZAO010000356.1 RefSeq gene 17376 18494 . + . ID=gene-LDO50_RS27795;Name=LDO50_RS27795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27795;old_locus_tag=BVI1335_760023 NZ_CAJZAO010000356.1 Protein Homology CDS 17376 18494 . + 0 ID=cds-WP_224020425.1;Parent=gene-LDO50_RS27795;Dbxref=GenBank:WP_224020425.1;Name=WP_224020425.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009907961.1;locus_tag=LDO50_RS27795;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_224020425.1;transl_table=11 NZ_CAJZAO010000356.1 RefSeq gene 18697 19623 . + . ID=gene-LDO50_RS27800;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=LDO50_RS27800;old_locus_tag=BVI1335_760024 NZ_CAJZAO010000356.1 Protein Homology CDS 18697 19623 . + 0 ID=cds-WP_011880725.1;Parent=gene-LDO50_RS27800;Dbxref=GenBank:WP_011880725.1;Name=WP_011880725.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523160.1;locus_tag=LDO50_RS27800;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_011880725.1;transl_table=11 NZ_CAJZAO010000356.1 RefSeq gene 19635 20906 . + . ID=gene-LDO50_RS27805;Name=LDO50_RS27805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27805;old_locus_tag=BVI1335_760025 NZ_CAJZAO010000356.1 Protein Homology CDS 19635 20906 . + 0 ID=cds-WP_011880724.1;Parent=gene-LDO50_RS27805;Dbxref=GenBank:WP_011880724.1;Name=WP_011880724.1;Ontology_term=GO:0015658,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089869.1;locus_tag=LDO50_RS27805;product=high-affinity branched-chain amino acid ABC transporter permease LivM;protein_id=WP_011880724.1;transl_table=11 NZ_CAJZAO010000356.1 RefSeq gene 20903 21676 . + . ID=gene-LDO50_RS27810;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=LDO50_RS27810;old_locus_tag=BVI1335_760026 NZ_CAJZAO010000356.1 Protein Homology CDS 20903 21676 . + 0 ID=cds-WP_046423030.1;Parent=gene-LDO50_RS27810;Dbxref=GenBank:WP_046423030.1;Name=WP_046423030.1;Ontology_term=GO:0005524;gbkey=CDS;gene=livG;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396442.1;locus_tag=LDO50_RS27810;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_046423030.1;transl_table=11 NZ_CAJZAO010000356.1 RefSeq gene 21676 22377 . + . ID=gene-LDO50_RS27815;Name=LDO50_RS27815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27815;old_locus_tag=BVI1335_760027 NZ_CAJZAO010000356.1 Protein Homology CDS 21676 22377 . + 0 ID=cds-WP_006484776.1;Parent=gene-LDO50_RS27815;Dbxref=GenBank:WP_006484776.1;Name=WP_006484776.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006161614.1;locus_tag=LDO50_RS27815;product=ABC transporter ATP-binding protein;protein_id=WP_006484776.1;transl_table=11 NZ_CAJZAO010000356.1 RefSeq gene 22469 22819 . + . ID=gene-LDO50_RS27820;Name=LDO50_RS27820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27820;old_locus_tag=BVI1335_760028 NZ_CAJZAO010000356.1 Protein Homology CDS 22469 22819 . + 0 ID=cds-WP_224020424.1;Parent=gene-LDO50_RS27820;Dbxref=GenBank:WP_224020424.1;Name=WP_224020424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484732.1;locus_tag=LDO50_RS27820;product=VOC family protein;protein_id=WP_224020424.1;transl_table=11 NZ_CAJZAO010000356.1 RefSeq gene 22869 23007 . - . ID=gene-LDO50_RS27825;Name=LDO50_RS27825;end_range=23007,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27825;partial=true NZ_CAJZAO010000356.1 Protein Homology CDS 22869 23007 . - 1 ID=cds-WP_224020426.1;Parent=gene-LDO50_RS27825;Dbxref=GenBank:WP_224020426.1;Name=WP_224020426.1;Ontology_term=GO:0003677;end_range=23007,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339589.1;locus_tag=LDO50_RS27825;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_224020426.1;transl_table=11 ##sequence-region NZ_CAJZAO010000357.1 1 27866 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000357.1 RefSeq region 1 27866 . + . ID=NZ_CAJZAO010000357.1:1..27866;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_77 NZ_CAJZAO010000357.1 RefSeq gene 1 846 . - . ID=gene-LDO50_RS27830;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=LDO50_RS27830;partial=true;start_range=.,1 NZ_CAJZAO010000357.1 Protein Homology CDS 1 846 . - 0 ID=cds-WP_224020427.1;Parent=gene-LDO50_RS27830;Dbxref=GenBank:WP_224020427.1;Name=WP_224020427.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411484.1;locus_tag=LDO50_RS27830;partial=true;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_224020427.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000357.1 RefSeq gene 1011 1940 . + . ID=gene-LDO50_RS27835;Name=LDO50_RS27835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27835;old_locus_tag=BVI1335_770002 NZ_CAJZAO010000357.1 Protein Homology CDS 1011 1940 . + 0 ID=cds-WP_034195506.1;Parent=gene-LDO50_RS27835;Dbxref=GenBank:WP_034195506.1;Name=WP_034195506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898487.1;locus_tag=LDO50_RS27835;product=2-hydroxyacid dehydrogenase;protein_id=WP_034195506.1;transl_table=11 NZ_CAJZAO010000357.1 RefSeq gene 2068 4020 . - . ID=gene-LDO50_RS27840;Name=LDO50_RS27840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27840;old_locus_tag=BVI1335_770003 NZ_CAJZAO010000357.1 Protein Homology CDS 2068 4020 . - 0 ID=cds-WP_224020428.1;Parent=gene-LDO50_RS27840;Dbxref=GenBank:WP_224020428.1;Name=WP_224020428.1;Ontology_term=GO:0006508,GO:0004177,GO:0008239;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,dipeptidyl-peptidase activity|0008239||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659501.1;locus_tag=LDO50_RS27840;product=Xaa-Pro dipeptidyl-peptidase;protein_id=WP_224020428.1;transl_table=11 NZ_CAJZAO010000357.1 RefSeq gene 4564 4899 . - . ID=gene-LDO50_RS27845;Name=LDO50_RS27845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27845 NZ_CAJZAO010000357.1 Protein Homology CDS 4564 4899 . - 0 ID=cds-WP_011880800.1;Parent=gene-LDO50_RS27845;Dbxref=GenBank:WP_011880800.1;Name=WP_011880800.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547066.1;locus_tag=LDO50_RS27845;product=helix-turn-helix domain-containing protein;protein_id=WP_011880800.1;transl_table=11 NZ_CAJZAO010000357.1 RefSeq gene 4978 5883 . + . ID=gene-LDO50_RS27850;Name=LDO50_RS27850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27850;old_locus_tag=BVI1335_770005 NZ_CAJZAO010000357.1 Protein Homology CDS 4978 5883 . + 0 ID=cds-WP_034195504.1;Parent=gene-LDO50_RS27850;Dbxref=GenBank:WP_034195504.1;Name=WP_034195504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415834.1;locus_tag=LDO50_RS27850;product=hypothetical protein;protein_id=WP_034195504.1;transl_table=11 NZ_CAJZAO010000357.1 RefSeq gene 6164 6394 . + . ID=gene-LDO50_RS27855;Name=LDO50_RS27855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27855;old_locus_tag=BVI1335_770006 NZ_CAJZAO010000357.1 Protein Homology CDS 6164 6394 . + 0 ID=cds-WP_014723991.1;Parent=gene-LDO50_RS27855;Dbxref=GenBank:WP_014723991.1;Name=WP_014723991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880798.1;locus_tag=LDO50_RS27855;product=hypothetical protein;protein_id=WP_014723991.1;transl_table=11 NZ_CAJZAO010000357.1 RefSeq gene 6558 7406 . - . ID=gene-LDO50_RS27860;Name=LDO50_RS27860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27860;old_locus_tag=BVI1335_770007 NZ_CAJZAO010000357.1 Protein Homology CDS 6558 7406 . - 0 ID=cds-WP_059562100.1;Parent=gene-LDO50_RS27860;Dbxref=GenBank:WP_059562100.1;Name=WP_059562100.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366757.1;locus_tag=LDO50_RS27860;product=alpha/beta hydrolase;protein_id=WP_059562100.1;transl_table=11 NZ_CAJZAO010000357.1 RefSeq gene 7748 8554 . - . ID=gene-LDO50_RS27865;Name=LDO50_RS27865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27865;old_locus_tag=BVI1335_770009 NZ_CAJZAO010000357.1 Protein Homology CDS 7748 8554 . - 0 ID=cds-WP_059462660.1;Parent=gene-LDO50_RS27865;Dbxref=GenBank:WP_059462660.1;Name=WP_059462660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723989.1;locus_tag=LDO50_RS27865;product=DinB family protein;protein_id=WP_059462660.1;transl_table=11 NZ_CAJZAO010000357.1 RefSeq gene 8690 9121 . - . ID=gene-LDO50_RS27870;Name=LDO50_RS27870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27870;old_locus_tag=BVI1335_770010 NZ_CAJZAO010000357.1 Protein Homology CDS 8690 9121 . - 0 ID=cds-WP_014723988.1;Parent=gene-LDO50_RS27870;Dbxref=GenBank:WP_014723988.1;Name=WP_014723988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880795.1;locus_tag=LDO50_RS27870;product=YciI family protein;protein_id=WP_014723988.1;transl_table=11 NZ_CAJZAO010000357.1 RefSeq gene 9384 11144 . - . ID=gene-LDO50_RS27875;Name=LDO50_RS27875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27875;old_locus_tag=BVI1335_770011 NZ_CAJZAO010000357.1 Protein Homology CDS 9384 11144 . - 0 ID=cds-WP_014723987.1;Parent=gene-LDO50_RS27875;Dbxref=GenBank:WP_014723987.1;Name=WP_014723987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481958.1;locus_tag=LDO50_RS27875;product=ATP-binding protein;protein_id=WP_014723987.1;transl_table=11 NZ_CAJZAO010000357.1 RefSeq gene 11304 11534 . + . ID=gene-LDO50_RS27880;Name=LDO50_RS27880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27880;old_locus_tag=BVI1335_770012 NZ_CAJZAO010000357.1 Protein Homology CDS 11304 11534 . + 0 ID=cds-WP_011880793.1;Parent=gene-LDO50_RS27880;Dbxref=GenBank:WP_011880793.1;Name=WP_011880793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481962.1;locus_tag=LDO50_RS27880;product=hypothetical protein;protein_id=WP_011880793.1;transl_table=11 NZ_CAJZAO010000357.1 RefSeq gene 11565 12266 . - . ID=gene-LDO50_RS27885;Name=LDO50_RS27885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27885;old_locus_tag=BVI1335_770013 NZ_CAJZAO010000357.1 Protein Homology CDS 11565 12266 . - 0 ID=cds-WP_011880792.1;Parent=gene-LDO50_RS27885;Dbxref=GenBank:WP_011880792.1;Name=WP_011880792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880792.1;locus_tag=LDO50_RS27885;product=MBL fold metallo-hydrolase;protein_id=WP_011880792.1;transl_table=11 NZ_CAJZAO010000357.1 RefSeq gene 12415 13185 . - . ID=gene-LDO50_RS27890;Name=LDO50_RS27890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27890;old_locus_tag=BVI1335_770015 NZ_CAJZAO010000357.1 Protein Homology CDS 12415 13185 . - 0 ID=cds-WP_059474650.1;Parent=gene-LDO50_RS27890;Dbxref=GenBank:WP_059474650.1;Name=WP_059474650.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880791.1;locus_tag=LDO50_RS27890;product=ABC transporter permease;protein_id=WP_059474650.1;transl_table=11 NZ_CAJZAO010000357.1 RefSeq gene 13191 14135 . - . ID=gene-LDO50_RS27895;Name=LDO50_RS27895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27895;old_locus_tag=BVI1335_770016 NZ_CAJZAO010000357.1 Protein Homology CDS 13191 14135 . - 0 ID=cds-WP_014723986.1;Parent=gene-LDO50_RS27895;Dbxref=GenBank:WP_014723986.1;Name=WP_014723986.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758876.1;locus_tag=LDO50_RS27895;product=ABC transporter ATP-binding protein;protein_id=WP_014723986.1;transl_table=11 NZ_CAJZAO010000357.1 RefSeq gene 14990 16600 . + . ID=gene-LDO50_RS27900;Name=LDO50_RS27900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27900;old_locus_tag=BVI1335_770018 NZ_CAJZAO010000357.1 Protein Homology CDS 14990 16600 . + 0 ID=cds-WP_011880789.1;Parent=gene-LDO50_RS27900;Dbxref=GenBank:WP_011880789.1;Name=WP_011880789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004555859.1;locus_tag=LDO50_RS27900;product=DUF2957 domain-containing protein;protein_id=WP_011880789.1;transl_table=11 NZ_CAJZAO010000357.1 RefSeq gene 16672 17925 . + . ID=gene-LDO50_RS27905;Name=LDO50_RS27905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27905;old_locus_tag=BVI1335_770019 NZ_CAJZAO010000357.1 Protein Homology CDS 16672 17925 . + 0 ID=cds-WP_011880788.1;Parent=gene-LDO50_RS27905;Dbxref=GenBank:WP_011880788.1;Name=WP_011880788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898510.1;locus_tag=LDO50_RS27905;product=DUF2957 domain-containing protein;protein_id=WP_011880788.1;transl_table=11 NZ_CAJZAO010000357.1 RefSeq gene 17991 18815 . + . ID=gene-LDO50_RS27910;Name=LDO50_RS27910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27910;old_locus_tag=BVI1335_770020 NZ_CAJZAO010000357.1 Protein Homology CDS 17991 18815 . + 0 ID=cds-WP_060042551.1;Parent=gene-LDO50_RS27910;Dbxref=GenBank:WP_060042551.1;Name=WP_060042551.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898511.1;locus_tag=LDO50_RS27910;product=OmpW/AlkL family protein;protein_id=WP_060042551.1;transl_table=11 NZ_CAJZAO010000357.1 RefSeq gene 18937 19440 . + . ID=gene-LDO50_RS27915;Name=LDO50_RS27915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27915;old_locus_tag=BVI1335_770021 NZ_CAJZAO010000357.1 Protein Homology CDS 18937 19440 . + 0 ID=cds-WP_011880786.1;Parent=gene-LDO50_RS27915;Dbxref=GenBank:WP_011880786.1;Name=WP_011880786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752709.1;locus_tag=LDO50_RS27915;product=hypothetical protein;protein_id=WP_011880786.1;transl_table=11 NZ_CAJZAO010000357.1 RefSeq gene 19680 20801 . + . ID=gene-LDO50_RS27920;Name=LDO50_RS27920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27920;old_locus_tag=BVI1335_770023 NZ_CAJZAO010000357.1 Protein Homology CDS 19680 20801 . + 0 ID=cds-WP_176315653.1;Parent=gene-LDO50_RS27920;Dbxref=GenBank:WP_176315653.1;Name=WP_176315653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880785.1;locus_tag=LDO50_RS27920;product=hypothetical protein;protein_id=WP_176315653.1;transl_table=11 NZ_CAJZAO010000357.1 RefSeq gene 20862 22562 . - . ID=gene-LDO50_RS27925;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=LDO50_RS27925;old_locus_tag=BVI1335_770024 NZ_CAJZAO010000357.1 Protein Homology CDS 20862 22562 . - 0 ID=cds-WP_034195499.1;Parent=gene-LDO50_RS27925;Dbxref=GenBank:WP_034195499.1;Name=WP_034195499.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880784.1;locus_tag=LDO50_RS27925;product=choline dehydrogenase;protein_id=WP_034195499.1;transl_table=11 NZ_CAJZAO010000357.1 RefSeq gene 22585 24054 . - . ID=gene-LDO50_RS27930;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=LDO50_RS27930;old_locus_tag=BVI1335_770025 NZ_CAJZAO010000357.1 Protein Homology CDS 22585 24054 . - 0 ID=cds-WP_059568774.1;Parent=gene-LDO50_RS27930;Dbxref=GenBank:WP_059568774.1;Name=WP_059568774.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533333.1;locus_tag=LDO50_RS27930;product=betaine-aldehyde dehydrogenase;protein_id=WP_059568774.1;transl_table=11 NZ_CAJZAO010000357.1 RefSeq gene 24087 24671 . - . ID=gene-LDO50_RS27935;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=LDO50_RS27935;old_locus_tag=BVI1335_770026 NZ_CAJZAO010000357.1 Protein Homology CDS 24087 24671 . - 0 ID=cds-WP_011880782.1;Parent=gene-LDO50_RS27935;Dbxref=GenBank:WP_011880782.1;Name=WP_011880782.1;Ontology_term=GO:0003677;gbkey=CDS;gene=betI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898516.1;locus_tag=LDO50_RS27935;product=transcriptional regulator BetI;protein_id=WP_011880782.1;transl_table=11 NZ_CAJZAO010000357.1 RefSeq gene 24966 26162 . + . ID=gene-LDO50_RS27940;Name=fdhA;gbkey=Gene;gene=fdhA;gene_biotype=protein_coding;locus_tag=LDO50_RS27940;old_locus_tag=BVI1335_770027 NZ_CAJZAO010000357.1 Protein Homology CDS 24966 26162 . + 0 ID=cds-WP_011880781.1;Parent=gene-LDO50_RS27940;Dbxref=GenBank:WP_011880781.1;Name=WP_011880781.1;Ontology_term=GO:0046292,GO:0018467;gbkey=CDS;gene=fdhA;go_function=formaldehyde dehydrogenase (NAD+) activity|0018467||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396349.1;locus_tag=LDO50_RS27940;product=formaldehyde dehydrogenase%2C glutathione-independent;protein_id=WP_011880781.1;transl_table=11 NZ_CAJZAO010000357.1 RefSeq gene 26258 27565 . - . ID=gene-LDO50_RS27945;Name=LDO50_RS27945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27945;old_locus_tag=BVI1335_770028 NZ_CAJZAO010000357.1 Protein Homology CDS 26258 27565 . - 0 ID=cds-WP_059462657.1;Parent=gene-LDO50_RS27945;Dbxref=GenBank:WP_059462657.1;Name=WP_059462657.1;Ontology_term=GO:0030001,GO:0046872,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion binding|0046872||IEA,metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880780.1;locus_tag=LDO50_RS27945;product=NRAMP family divalent metal transporter;protein_id=WP_059462657.1;transl_table=11 ##sequence-region NZ_CAJZAO010000358.1 1 12821 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000358.1 RefSeq region 1 12821 . + . ID=NZ_CAJZAO010000358.1:1..12821;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_78 NZ_CAJZAO010000358.1 RefSeq gene 454 1881 . + . ID=gene-LDO50_RS27955;Name=LDO50_RS27955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27955;old_locus_tag=BVI1335_780001 NZ_CAJZAO010000358.1 Protein Homology CDS 454 1881 . + 0 ID=cds-WP_176315741.1;Parent=gene-LDO50_RS27955;Dbxref=GenBank:WP_176315741.1;Name=WP_176315741.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880889.1;locus_tag=LDO50_RS27955;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_176315741.1;transl_table=11 NZ_CAJZAO010000358.1 RefSeq gene 2393 3136 . - . ID=gene-LDO50_RS27960;Name=LDO50_RS27960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27960;old_locus_tag=BVI1335_780002 NZ_CAJZAO010000358.1 Protein Homology CDS 2393 3136 . - 0 ID=cds-WP_126220652.1;Parent=gene-LDO50_RS27960;Dbxref=GenBank:WP_126220652.1;Name=WP_126220652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724063.1;locus_tag=LDO50_RS27960;product=2OG-Fe(II) oxygenase;protein_id=WP_126220652.1;transl_table=11 NZ_CAJZAO010000358.1 RefSeq gene 3453 5045 . - . ID=gene-LDO50_RS27965;Name=LDO50_RS27965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27965;old_locus_tag=BVI1335_780003 NZ_CAJZAO010000358.1 Protein Homology CDS 3453 5045 . - 0 ID=cds-WP_224020429.1;Parent=gene-LDO50_RS27965;Dbxref=GenBank:WP_224020429.1;Name=WP_224020429.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898366.1;locus_tag=LDO50_RS27965;product=inorganic phosphate transporter;protein_id=WP_224020429.1;transl_table=11 NZ_CAJZAO010000358.1 RefSeq gene 5199 6107 . - . ID=gene-LDO50_RS27970;Name=LDO50_RS27970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27970;old_locus_tag=BVI1335_780004 NZ_CAJZAO010000358.1 Protein Homology CDS 5199 6107 . - 0 ID=cds-WP_176321968.1;Parent=gene-LDO50_RS27970;Dbxref=GenBank:WP_176321968.1;Name=WP_176321968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758655.1;locus_tag=LDO50_RS27970;product=LysR family transcriptional regulator;protein_id=WP_176321968.1;transl_table=11 NZ_CAJZAO010000358.1 RefSeq gene 6217 8520 . + . ID=gene-LDO50_RS27975;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=LDO50_RS27975;old_locus_tag=BVI1335_780005 NZ_CAJZAO010000358.1 Protein Homology CDS 6217 8520 . + 0 ID=cds-WP_224020430.1;Parent=gene-LDO50_RS27975;Dbxref=GenBank:WP_224020430.1;Name=WP_224020430.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880885.1;locus_tag=LDO50_RS27975;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_224020430.1;transl_table=11 NZ_CAJZAO010000358.1 RefSeq gene 8638 9594 . - . ID=gene-LDO50_RS27980;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=LDO50_RS27980;old_locus_tag=BVI1335_780006 NZ_CAJZAO010000358.1 Protein Homology CDS 8638 9594 . - 0 ID=cds-WP_034194754.1;Parent=gene-LDO50_RS27980;Dbxref=GenBank:WP_034194754.1;Name=WP_034194754.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766488.1;locus_tag=LDO50_RS27980;product=agmatinase;protein_id=WP_034194754.1;transl_table=11 NZ_CAJZAO010000358.1 RefSeq gene 9734 10645 . + . ID=gene-LDO50_RS27985;Name=LDO50_RS27985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27985;old_locus_tag=BVI1335_780007 NZ_CAJZAO010000358.1 Protein Homology CDS 9734 10645 . + 0 ID=cds-WP_011880883.1;Parent=gene-LDO50_RS27985;Dbxref=GenBank:WP_011880883.1;Name=WP_011880883.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880883.1;locus_tag=LDO50_RS27985;product=LysR family transcriptional regulator;protein_id=WP_011880883.1;transl_table=11 NZ_CAJZAO010000358.1 RefSeq gene 10703 11167 . - . ID=gene-LDO50_RS27990;Name=LDO50_RS27990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27990;old_locus_tag=BVI1335_780008 NZ_CAJZAO010000358.1 Protein Homology CDS 10703 11167 . - 0 ID=cds-WP_045577681.1;Parent=gene-LDO50_RS27990;Dbxref=GenBank:WP_045577681.1;Name=WP_045577681.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188527.1;locus_tag=LDO50_RS27990;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_045577681.1;transl_table=11 NZ_CAJZAO010000358.1 RefSeq gene 11301 11924 . + . ID=gene-LDO50_RS27995;Name=LDO50_RS27995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS27995;old_locus_tag=BVI1335_780009 NZ_CAJZAO010000358.1 Protein Homology CDS 11301 11924 . + 0 ID=cds-WP_011880881.1;Parent=gene-LDO50_RS27995;Dbxref=GenBank:WP_011880881.1;Name=WP_011880881.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752375.1;locus_tag=LDO50_RS27995;product=LysE family translocator;protein_id=WP_011880881.1;transl_table=11 NZ_CAJZAO010000358.1 RefSeq gene 12183 12821 . + . ID=gene-LDO50_RS28000;Name=LDO50_RS28000;end_range=12821,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28000;partial=true NZ_CAJZAO010000358.1 Protein Homology CDS 12183 12821 . + 0 ID=cds-WP_253074469.1;Parent=gene-LDO50_RS28000;Dbxref=GenBank:WP_253074469.1;Name=WP_253074469.1;Ontology_term=GO:0008236;end_range=12821,.;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724058.1;locus_tag=LDO50_RS28000;partial=true;product=protease pro-enzyme activation domain-containing protein;protein_id=WP_253074469.1;transl_table=11 ##sequence-region NZ_CAJZAO010000359.1 1 16374 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000359.1 RefSeq region 1 16374 . + . ID=NZ_CAJZAO010000359.1:1..16374;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_79 NZ_CAJZAO010000359.1 RefSeq pseudogene 1 262 . + . ID=gene-LDO50_RS28005;Name=LDO50_RS28005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS28005;old_locus_tag=BVI1335_790001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000359.1 Protein Homology CDS 1 262 . + 1 ID=cds-LDO50_RS28005;Parent=gene-LDO50_RS28005;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880004.1;locus_tag=LDO50_RS28005;partial=true;product=manganese catalase family protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000359.1 RefSeq gene 569 1003 . - . ID=gene-LDO50_RS28010;Name=LDO50_RS28010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28010;old_locus_tag=BVI1335_790002 NZ_CAJZAO010000359.1 Protein Homology CDS 569 1003 . - 0 ID=cds-WP_224020431.1;Parent=gene-LDO50_RS28010;Dbxref=GenBank:WP_224020431.1;Name=WP_224020431.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877608.1;locus_tag=LDO50_RS28010;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_224020431.1;transl_table=11 NZ_CAJZAO010000359.1 RefSeq gene 1097 1912 . + . ID=gene-LDO50_RS28015;Name=LDO50_RS28015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28015;old_locus_tag=BVI1335_790004 NZ_CAJZAO010000359.1 Protein Homology CDS 1097 1912 . + 0 ID=cds-WP_224020432.1;Parent=gene-LDO50_RS28015;Dbxref=GenBank:WP_224020432.1;Name=WP_224020432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877607.1;locus_tag=LDO50_RS28015;product=oxidoreductase;protein_id=WP_224020432.1;transl_table=11 NZ_CAJZAO010000359.1 RefSeq gene 2179 2574 . - . ID=gene-LDO50_RS28020;Name=LDO50_RS28020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28020;old_locus_tag=BVI1335_790005 NZ_CAJZAO010000359.1 GeneMarkS-2+ CDS 2179 2574 . - 0 ID=cds-WP_059704494.1;Parent=gene-LDO50_RS28020;Dbxref=GenBank:WP_059704494.1;Name=WP_059704494.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS28020;product=hypothetical protein;protein_id=WP_059704494.1;transl_table=11 NZ_CAJZAO010000359.1 RefSeq gene 3116 3634 . - . ID=gene-LDO50_RS28025;Name=LDO50_RS28025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28025 NZ_CAJZAO010000359.1 GeneMarkS-2+ CDS 3116 3634 . - 0 ID=cds-WP_059581560.1;Parent=gene-LDO50_RS28025;Dbxref=GenBank:WP_059581560.1;Name=WP_059581560.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS28025;product=hypothetical protein;protein_id=WP_059581560.1;transl_table=11 NZ_CAJZAO010000359.1 RefSeq gene 3999 4187 . - . ID=gene-LDO50_RS28030;Name=LDO50_RS28030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28030 NZ_CAJZAO010000359.1 GeneMarkS-2+ CDS 3999 4187 . - 0 ID=cds-WP_059581563.1;Parent=gene-LDO50_RS28030;Dbxref=GenBank:WP_059581563.1;Name=WP_059581563.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS28030;product=hypothetical protein;protein_id=WP_059581563.1;transl_table=11 NZ_CAJZAO010000359.1 RefSeq gene 4184 5125 . - . ID=gene-LDO50_RS28035;Name=LDO50_RS28035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28035;old_locus_tag=BVI1335_790007 NZ_CAJZAO010000359.1 Protein Homology CDS 4184 5125 . - 0 ID=cds-WP_224020433.1;Parent=gene-LDO50_RS28035;Dbxref=GenBank:WP_224020433.1;Name=WP_224020433.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879987.1;locus_tag=LDO50_RS28035;product=LysR family transcriptional regulator;protein_id=WP_224020433.1;transl_table=11 NZ_CAJZAO010000359.1 RefSeq gene 5246 6109 . + . ID=gene-LDO50_RS28040;Name=LDO50_RS28040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28040;old_locus_tag=BVI1335_790008 NZ_CAJZAO010000359.1 Protein Homology CDS 5246 6109 . + 0 ID=cds-WP_224020434.1;Parent=gene-LDO50_RS28040;Dbxref=GenBank:WP_224020434.1;Name=WP_224020434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012426247.1;locus_tag=LDO50_RS28040;product=NmrA family NAD(P)-binding protein;protein_id=WP_224020434.1;transl_table=11 NZ_CAJZAO010000359.1 RefSeq gene 6189 6959 . + . ID=gene-LDO50_RS28045;Name=LDO50_RS28045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28045;old_locus_tag=BVI1335_790009 NZ_CAJZAO010000359.1 Protein Homology CDS 6189 6959 . + 0 ID=cds-WP_224020435.1;Parent=gene-LDO50_RS28045;Dbxref=GenBank:WP_224020435.1;Name=WP_224020435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007181751.1;locus_tag=LDO50_RS28045;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_224020435.1;transl_table=11 NZ_CAJZAO010000359.1 RefSeq gene 7337 7819 . + . ID=gene-LDO50_RS28050;Name=LDO50_RS28050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28050;old_locus_tag=BVI1335_790010 NZ_CAJZAO010000359.1 Protein Homology CDS 7337 7819 . + 0 ID=cds-WP_034194741.1;Parent=gene-LDO50_RS28050;Dbxref=GenBank:WP_034194741.1;Name=WP_034194741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018423524.1;locus_tag=LDO50_RS28050;product=cupin domain-containing protein;protein_id=WP_034194741.1;transl_table=11 NZ_CAJZAO010000359.1 RefSeq gene 8112 8585 . + . ID=gene-LDO50_RS28055;Name=LDO50_RS28055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28055;old_locus_tag=BVI1335_790011 NZ_CAJZAO010000359.1 Protein Homology CDS 8112 8585 . + 0 ID=cds-WP_046426840.1;Parent=gene-LDO50_RS28055;Dbxref=GenBank:WP_046426840.1;Name=WP_046426840.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879984.1;locus_tag=LDO50_RS28055;product=NUDIX hydrolase;protein_id=WP_046426840.1;transl_table=11 NZ_CAJZAO010000359.1 RefSeq gene 8560 9051 . - . ID=gene-LDO50_RS28060;Name=LDO50_RS28060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28060;old_locus_tag=BVI1335_790012 NZ_CAJZAO010000359.1 Protein Homology CDS 8560 9051 . - 0 ID=cds-WP_224020436.1;Parent=gene-LDO50_RS28060;Dbxref=GenBank:WP_224020436.1;Name=WP_224020436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879983.1;locus_tag=LDO50_RS28060;product=DUF1641 domain-containing protein;protein_id=WP_224020436.1;transl_table=11 NZ_CAJZAO010000359.1 RefSeq gene 9160 9642 . - . ID=gene-LDO50_RS28065;Name=LDO50_RS28065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28065;old_locus_tag=BVI1335_790013 NZ_CAJZAO010000359.1 Protein Homology CDS 9160 9642 . - 0 ID=cds-WP_046426845.1;Parent=gene-LDO50_RS28065;Dbxref=GenBank:WP_046426845.1;Name=WP_046426845.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493752.1;locus_tag=LDO50_RS28065;product=BON domain-containing protein;protein_id=WP_046426845.1;transl_table=11 NZ_CAJZAO010000359.1 RefSeq gene 10222 10962 . - . ID=gene-LDO50_RS28070;Name=LDO50_RS28070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28070;old_locus_tag=BVI1335_790014 NZ_CAJZAO010000359.1 Protein Homology CDS 10222 10962 . - 0 ID=cds-WP_081053387.1;Parent=gene-LDO50_RS28070;Dbxref=GenBank:WP_081053387.1;Name=WP_081053387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217918.1;locus_tag=LDO50_RS28070;product=FRG domain-containing protein;protein_id=WP_081053387.1;transl_table=11 NZ_CAJZAO010000359.1 RefSeq gene 10986 11999 . - . ID=gene-LDO50_RS28075;Name=LDO50_RS28075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28075;old_locus_tag=BVI1335_790015 NZ_CAJZAO010000359.1 Protein Homology CDS 10986 11999 . - 0 ID=cds-WP_011879980.1;Parent=gene-LDO50_RS28075;Dbxref=GenBank:WP_011879980.1;Name=WP_011879980.1;Ontology_term=GO:0006119,GO:0009055,GO:0005886,GO:0070069;gbkey=CDS;go_component=plasma membrane|0005886||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=oxidative phosphorylation|0006119||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405145.1;locus_tag=LDO50_RS28075;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_011879980.1;transl_table=11 NZ_CAJZAO010000359.1 RefSeq gene 11986 13416 . - . ID=gene-LDO50_RS28080;Name=LDO50_RS28080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28080;old_locus_tag=BVI1335_790016 NZ_CAJZAO010000359.1 Protein Homology CDS 11986 13416 . - 0 ID=cds-WP_224020437.1;Parent=gene-LDO50_RS28080;Dbxref=GenBank:WP_224020437.1;Name=WP_224020437.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398980.1;locus_tag=LDO50_RS28080;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_224020437.1;transl_table=11 NZ_CAJZAO010000359.1 RefSeq gene 13516 13908 . - . ID=gene-LDO50_RS28085;Name=copM;gbkey=Gene;gene=copM;gene_biotype=protein_coding;locus_tag=LDO50_RS28085;old_locus_tag=BVI1335_790017 NZ_CAJZAO010000359.1 Protein Homology CDS 13516 13908 . - 0 ID=cds-WP_069223748.1;Parent=gene-LDO50_RS28085;Dbxref=GenBank:WP_069223748.1;Name=WP_069223748.1;Ontology_term=GO:0055070,GO:0016530;gbkey=CDS;gene=copM;go_function=metallochaperone activity|0016530||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879978.1;locus_tag=LDO50_RS28085;product=CopM family metallochaperone;protein_id=WP_069223748.1;transl_table=11 NZ_CAJZAO010000359.1 RefSeq gene 13952 15622 . - . ID=gene-LDO50_RS28090;Name=LDO50_RS28090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28090;old_locus_tag=BVI1335_790018 NZ_CAJZAO010000359.1 Protein Homology CDS 13952 15622 . - 0 ID=cds-WP_224020438.1;Parent=gene-LDO50_RS28090;Dbxref=GenBank:WP_224020438.1;Name=WP_224020438.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879977.1;locus_tag=LDO50_RS28090;product=GMC family oxidoreductase;protein_id=WP_224020438.1;transl_table=11 NZ_CAJZAO010000359.1 RefSeq gene 15612 16274 . - . ID=gene-LDO50_RS28095;Name=LDO50_RS28095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28095;old_locus_tag=BVI1335_790019 NZ_CAJZAO010000359.1 Protein Homology CDS 15612 16274 . - 0 ID=cds-WP_059581676.1;Parent=gene-LDO50_RS28095;Dbxref=GenBank:WP_059581676.1;Name=WP_059581676.1;Ontology_term=GO:0008873,GO:0008875;gbkey=CDS;go_function=gluconate 2-dehydrogenase activity|0008873||IEA,gluconate dehydrogenase activity|0008875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879976.1;locus_tag=LDO50_RS28095;product=gluconate 2-dehydrogenase subunit 3 family protein;protein_id=WP_059581676.1;transl_table=11 ##sequence-region NZ_CAJZAO010000360.1 1 37459 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000360.1 RefSeq region 1 37459 . + . ID=NZ_CAJZAO010000360.1:1..37459;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_8 NZ_CAJZAO010000360.1 RefSeq gene 1 698 . + . ID=gene-LDO50_RS28100;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=LDO50_RS28100;old_locus_tag=BVI1335_80001;partial=true;start_range=.,1 NZ_CAJZAO010000360.1 Protein Homology CDS 1 698 . + 2 ID=cds-WP_224020440.1;Parent=gene-LDO50_RS28100;Dbxref=GenBank:WP_224020440.1;Name=WP_224020440.1;Ontology_term=GO:0015628,GO:0009276,GO:0015627;gbkey=CDS;gene=gspL;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544455.1;locus_tag=LDO50_RS28100;partial=true;product=type II secretion system protein GspL;protein_id=WP_224020440.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 695 1201 . + . ID=gene-LDO50_RS28105;Name=gspM;gbkey=Gene;gene=gspM;gene_biotype=protein_coding;locus_tag=LDO50_RS28105;old_locus_tag=BVI1335_80002 NZ_CAJZAO010000360.1 Protein Homology CDS 695 1201 . + 0 ID=cds-WP_011882766.1;Parent=gene-LDO50_RS28105;Dbxref=GenBank:WP_011882766.1;Name=WP_011882766.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspM;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327581.1;locus_tag=LDO50_RS28105;product=type II secretion system protein GspM;protein_id=WP_011882766.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 1233 2021 . + . ID=gene-LDO50_RS28110;Name=gspN;gbkey=Gene;gene=gspN;gene_biotype=protein_coding;locus_tag=LDO50_RS28110;old_locus_tag=BVI1335_80003 NZ_CAJZAO010000360.1 Protein Homology CDS 1233 2021 . + 0 ID=cds-WP_059621838.1;Parent=gene-LDO50_RS28110;Dbxref=GenBank:WP_059621838.1;Name=WP_059621838.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspN;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750440.1;locus_tag=LDO50_RS28110;product=type II secretion system protein N;protein_id=WP_059621838.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 2050 3588 . - . ID=gene-LDO50_RS28115;Name=LDO50_RS28115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28115;old_locus_tag=BVI1335_80004 NZ_CAJZAO010000360.1 Protein Homology CDS 2050 3588 . - 0 ID=cds-WP_034193001.1;Parent=gene-LDO50_RS28115;Dbxref=GenBank:WP_034193001.1;Name=WP_034193001.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544458.1;locus_tag=LDO50_RS28115;product=efflux transporter outer membrane subunit;protein_id=WP_034193001.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 3876 4169 . - . ID=gene-LDO50_RS28120;Name=LDO50_RS28120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28120;old_locus_tag=BVI1335_80005 NZ_CAJZAO010000360.1 Protein Homology CDS 3876 4169 . - 0 ID=cds-WP_011882763.1;Parent=gene-LDO50_RS28120;Dbxref=GenBank:WP_011882763.1;Name=WP_011882763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750438.1;locus_tag=LDO50_RS28120;product=hypothetical protein;protein_id=WP_011882763.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 4343 4840 . + . ID=gene-LDO50_RS28125;Name=LDO50_RS28125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28125;old_locus_tag=BVI1335_80006 NZ_CAJZAO010000360.1 Protein Homology CDS 4343 4840 . + 0 ID=cds-WP_059454920.1;Parent=gene-LDO50_RS28125;Dbxref=GenBank:WP_059454920.1;Name=WP_059454920.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882762.1;locus_tag=LDO50_RS28125;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_059454920.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 5016 6578 . + . ID=gene-LDO50_RS28130;Name=LDO50_RS28130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28130;old_locus_tag=BVI1335_80008 NZ_CAJZAO010000360.1 Protein Homology CDS 5016 6578 . + 0 ID=cds-WP_014722136.1;Parent=gene-LDO50_RS28130;Dbxref=GenBank:WP_014722136.1;Name=WP_014722136.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416603.1;locus_tag=LDO50_RS28130;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_014722136.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 6705 7631 . - . ID=gene-LDO50_RS28135;Name=LDO50_RS28135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28135;old_locus_tag=BVI1335_80009 NZ_CAJZAO010000360.1 Protein Homology CDS 6705 7631 . - 0 ID=cds-WP_011882760.1;Parent=gene-LDO50_RS28135;Dbxref=GenBank:WP_011882760.1;Name=WP_011882760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477236.1;locus_tag=LDO50_RS28135;product=LysR family transcriptional regulator;protein_id=WP_011882760.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 7770 8246 . + . ID=gene-LDO50_RS28140;Name=LDO50_RS28140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28140;old_locus_tag=BVI1335_80010 NZ_CAJZAO010000360.1 Protein Homology CDS 7770 8246 . + 0 ID=cds-WP_011882759.1;Parent=gene-LDO50_RS28140;Dbxref=GenBank:WP_011882759.1;Name=WP_011882759.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882759.1;locus_tag=LDO50_RS28140;product=CidA/LrgA family protein;protein_id=WP_011882759.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 8260 8982 . + . ID=gene-LDO50_RS28145;Name=LDO50_RS28145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28145;old_locus_tag=BVI1335_80011 NZ_CAJZAO010000360.1 Protein Homology CDS 8260 8982 . + 0 ID=cds-WP_059669519.1;Parent=gene-LDO50_RS28145;Dbxref=GenBank:WP_059669519.1;Name=WP_059669519.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895445.1;locus_tag=LDO50_RS28145;product=LrgB family protein;protein_id=WP_059669519.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 9205 9741 . + . ID=gene-LDO50_RS28150;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=LDO50_RS28150;old_locus_tag=BVI1335_80012 NZ_CAJZAO010000360.1 Protein Homology CDS 9205 9741 . + 0 ID=cds-WP_011882757.1;Parent=gene-LDO50_RS28150;Dbxref=GenBank:WP_011882757.1;Name=WP_011882757.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750432.1;locus_tag=LDO50_RS28150;product=flagellar basal body-associated protein FliL;protein_id=WP_011882757.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 9764 10762 . + . ID=gene-LDO50_RS28155;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=LDO50_RS28155;old_locus_tag=BVI1335_80013 NZ_CAJZAO010000360.1 Protein Homology CDS 9764 10762 . + 0 ID=cds-WP_011882756.1;Parent=gene-LDO50_RS28155;Dbxref=GenBank:WP_011882756.1;Name=WP_011882756.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524547.1;locus_tag=LDO50_RS28155;product=flagellar motor switch protein FliM;protein_id=WP_011882756.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 10755 11267 . + . ID=gene-LDO50_RS28160;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=LDO50_RS28160;old_locus_tag=BVI1335_80014 NZ_CAJZAO010000360.1 Protein Homology CDS 10755 11267 . + 0 ID=cds-WP_059463017.1;Parent=gene-LDO50_RS28160;Dbxref=GenBank:WP_059463017.1;Name=WP_059463017.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407291.1;locus_tag=LDO50_RS28160;product=flagellar motor switch protein FliN;protein_id=WP_059463017.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 11264 11833 . + . ID=gene-LDO50_RS28165;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=LDO50_RS28165;old_locus_tag=BVI1335_80015 NZ_CAJZAO010000360.1 Protein Homology CDS 11264 11833 . + 0 ID=cds-WP_224020441.1;Parent=gene-LDO50_RS28165;Dbxref=GenBank:WP_224020441.1;Name=WP_224020441.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495402.1;locus_tag=LDO50_RS28165;product=flagellar biosynthetic protein FliO;protein_id=WP_224020441.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 11870 12631 . + . ID=gene-LDO50_RS28170;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=LDO50_RS28170;old_locus_tag=BVI1335_80016 NZ_CAJZAO010000360.1 Protein Homology CDS 11870 12631 . + 0 ID=cds-WP_011882753.1;Parent=gene-LDO50_RS28170;Dbxref=GenBank:WP_011882753.1;Name=WP_011882753.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011325008.1;locus_tag=LDO50_RS28170;product=flagellar type III secretion system pore protein FliP;protein_id=WP_011882753.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 12647 12919 . + . ID=gene-LDO50_RS28175;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=LDO50_RS28175;old_locus_tag=BVI1335_80017 NZ_CAJZAO010000360.1 Protein Homology CDS 12647 12919 . + 0 ID=cds-WP_011882752.1;Parent=gene-LDO50_RS28175;Dbxref=GenBank:WP_011882752.1;Name=WP_011882752.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199882.1;locus_tag=LDO50_RS28175;product=flagellar biosynthesis protein FliQ;protein_id=WP_011882752.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 12948 13730 . + . ID=gene-LDO50_RS28180;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=LDO50_RS28180;old_locus_tag=BVI1335_80018 NZ_CAJZAO010000360.1 Protein Homology CDS 12948 13730 . + 0 ID=cds-WP_011882751.1;Parent=gene-LDO50_RS28180;Dbxref=GenBank:WP_011882751.1;Name=WP_011882751.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491278.1;locus_tag=LDO50_RS28180;product=flagellar biosynthetic protein FliR;protein_id=WP_011882751.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 13876 14880 . + . ID=gene-LDO50_RS28185;Name=LDO50_RS28185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28185;old_locus_tag=BVI1335_80019 NZ_CAJZAO010000360.1 Protein Homology CDS 13876 14880 . + 0 ID=cds-WP_059460847.1;Parent=gene-LDO50_RS28185;Dbxref=GenBank:WP_059460847.1;Name=WP_059460847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202867.1;locus_tag=LDO50_RS28185;product=ABC transporter substrate-binding protein;protein_id=WP_059460847.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 15016 15813 . + . ID=gene-LDO50_RS28190;Name=LDO50_RS28190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28190;old_locus_tag=BVI1335_80020 NZ_CAJZAO010000360.1 Protein Homology CDS 15016 15813 . + 0 ID=cds-WP_011882749.1;Parent=gene-LDO50_RS28190;Dbxref=GenBank:WP_011882749.1;Name=WP_011882749.1;Ontology_term=GO:0006810,GO:0005215,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750416.1;locus_tag=LDO50_RS28190;product=ABC transporter ATP-binding protein;protein_id=WP_011882749.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 15859 16716 . + . ID=gene-LDO50_RS28195;Name=LDO50_RS28195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28195;old_locus_tag=BVI1335_80021 NZ_CAJZAO010000360.1 Protein Homology CDS 15859 16716 . + 0 ID=cds-WP_011882748.1;Parent=gene-LDO50_RS28195;Dbxref=GenBank:WP_011882748.1;Name=WP_011882748.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882748.1;locus_tag=LDO50_RS28195;product=ABC transporter permease;protein_id=WP_011882748.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 16797 18164 . + . ID=gene-LDO50_RS28200;Name=LDO50_RS28200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28200;old_locus_tag=BVI1335_80023 NZ_CAJZAO010000360.1 Protein Homology CDS 16797 18164 . + 0 ID=cds-WP_059695042.1;Parent=gene-LDO50_RS28200;Dbxref=GenBank:WP_059695042.1;Name=WP_059695042.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495405.1;locus_tag=LDO50_RS28200;product=sensor histidine kinase;protein_id=WP_059695042.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 18179 18856 . + . ID=gene-LDO50_RS28205;Name=LDO50_RS28205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28205;old_locus_tag=BVI1335_80022 NZ_CAJZAO010000360.1 Protein Homology CDS 18179 18856 . + 0 ID=cds-WP_045578656.1;Parent=gene-LDO50_RS28205;Dbxref=GenBank:WP_045578656.1;Name=WP_045578656.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882746.1;locus_tag=LDO50_RS28205;product=response regulator;protein_id=WP_045578656.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 19163 20293 . + . ID=gene-LDO50_RS28210;Name=LDO50_RS28210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28210;old_locus_tag=BVI1335_80024 NZ_CAJZAO010000360.1 Protein Homology CDS 19163 20293 . + 0 ID=cds-WP_034193009.1;Parent=gene-LDO50_RS28210;Dbxref=GenBank:WP_034193009.1;Name=WP_034193009.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895421.1;locus_tag=LDO50_RS28210;product=porin;protein_id=WP_034193009.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 20629 22647 . + . ID=gene-LDO50_RS28215;Name=LDO50_RS28215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28215;old_locus_tag=BVI1335_80026 NZ_CAJZAO010000360.1 Protein Homology CDS 20629 22647 . + 0 ID=cds-WP_014722124.1;Parent=gene-LDO50_RS28215;Dbxref=GenBank:WP_014722124.1;Name=WP_014722124.1;Ontology_term=GO:0006306,GO:0009307,GO:0003677,GO:0008168,GO:0008170,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,N-methyltransferase activity|0008170||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=obsolete DNA methylation|0006306||IEA,DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722124.1;locus_tag=LDO50_RS28215;product=site-specific DNA-methyltransferase;protein_id=WP_014722124.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 22647 25673 . + . ID=gene-LDO50_RS28220;Name=LDO50_RS28220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28220;old_locus_tag=BVI1335_80025 NZ_CAJZAO010000360.1 Protein Homology CDS 22647 25673 . + 0 ID=cds-WP_224020442.1;Parent=gene-LDO50_RS28220;Dbxref=GenBank:WP_224020442.1;Name=WP_224020442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722123.1;locus_tag=LDO50_RS28220;product=type III restriction-modification system endonuclease;protein_id=WP_224020442.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 25929 26312 . - . ID=gene-LDO50_RS28225;Name=LDO50_RS28225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28225;old_locus_tag=BVI1335_80027 NZ_CAJZAO010000360.1 Protein Homology CDS 25929 26312 . - 0 ID=cds-WP_034193012.1;Parent=gene-LDO50_RS28225;Dbxref=GenBank:WP_034193012.1;Name=WP_034193012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750409.1;locus_tag=LDO50_RS28225;product=hypothetical protein;protein_id=WP_034193012.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 26501 26755 . - . ID=gene-LDO50_RS28230;Name=LDO50_RS28230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28230;old_locus_tag=BVI1335_80028 NZ_CAJZAO010000360.1 Protein Homology CDS 26501 26755 . - 0 ID=cds-WP_034193013.1;Parent=gene-LDO50_RS28230;Dbxref=GenBank:WP_034193013.1;Name=WP_034193013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487314.1;locus_tag=LDO50_RS28230;product=glycine zipper 2TM domain protein;protein_id=WP_034193013.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 26812 27114 . - . ID=gene-LDO50_RS28235;Name=LDO50_RS28235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28235;old_locus_tag=BVI1335_80029 NZ_CAJZAO010000360.1 Protein Homology CDS 26812 27114 . - 0 ID=cds-WP_034193014.1;Parent=gene-LDO50_RS28235;Dbxref=GenBank:WP_034193014.1;Name=WP_034193014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882740.1;locus_tag=LDO50_RS28235;product=hypothetical protein;protein_id=WP_034193014.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 27346 28359 . - . ID=gene-LDO50_RS28240;Name=egtD;gbkey=Gene;gene=egtD;gene_biotype=protein_coding;locus_tag=LDO50_RS28240;old_locus_tag=BVI1335_80030 NZ_CAJZAO010000360.1 Protein Homology CDS 27346 28359 . - 0 ID=cds-WP_034193015.1;Parent=gene-LDO50_RS28240;Dbxref=GenBank:WP_034193015.1;Name=WP_034193015.1;Ontology_term=GO:0052699,GO:0052706;gbkey=CDS;gene=egtD;go_function=L-histidine N(alpha)-methyltransferase activity|0052706||IEA;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412578.1;locus_tag=LDO50_RS28240;product=L-histidine N(alpha)-methyltransferase;protein_id=WP_034193015.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 28343 29572 . - . ID=gene-LDO50_RS28245;Name=egtB;gbkey=Gene;gene=egtB;gene_biotype=protein_coding;locus_tag=LDO50_RS28245;old_locus_tag=BVI1335_80031 NZ_CAJZAO010000360.1 Protein Homology CDS 28343 29572 . - 0 ID=cds-WP_176327609.1;Parent=gene-LDO50_RS28245;Dbxref=GenBank:WP_176327609.1;Name=WP_176327609.1;Ontology_term=GO:0052699;gbkey=CDS;gene=egtB;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327561.1;locus_tag=LDO50_RS28245;product=ergothioneine biosynthesis protein EgtB;protein_id=WP_176327609.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 30127 30603 . + . ID=gene-LDO50_RS28250;Name=LDO50_RS28250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28250;old_locus_tag=BVI1335_80032 NZ_CAJZAO010000360.1 Protein Homology CDS 30127 30603 . + 0 ID=cds-WP_011882736.1;Parent=gene-LDO50_RS28250;Dbxref=GenBank:WP_011882736.1;Name=WP_011882736.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477215.1;locus_tag=LDO50_RS28250;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_011882736.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 30603 31472 . + . ID=gene-LDO50_RS28255;Name=LDO50_RS28255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28255;old_locus_tag=BVI1335_80033 NZ_CAJZAO010000360.1 Protein Homology CDS 30603 31472 . + 0 ID=cds-WP_014722116.1;Parent=gene-LDO50_RS28255;Dbxref=GenBank:WP_014722116.1;Name=WP_014722116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412577.1;locus_tag=LDO50_RS28255;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_014722116.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 31646 31722 . - . ID=gene-LDO50_RS28260;Name=LDO50_RS28260;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS28260;old_locus_tag=BVI1335_TRNA45 NZ_CAJZAO010000360.1 tRNAscan-SE tRNA 31646 31722 . - . ID=rna-LDO50_RS28260;Parent=gene-LDO50_RS28260;anticodon=(pos:complement(31686..31688));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS28260;product=tRNA-Val NZ_CAJZAO010000360.1 tRNAscan-SE exon 31646 31722 . - . ID=exon-LDO50_RS28260-1;Parent=rna-LDO50_RS28260;anticodon=(pos:complement(31686..31688));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS28260;product=tRNA-Val NZ_CAJZAO010000360.1 RefSeq gene 32598 33674 . + . ID=gene-LDO50_RS28265;Name=LDO50_RS28265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28265;old_locus_tag=BVI1335_80036 NZ_CAJZAO010000360.1 Protein Homology CDS 32598 33674 . + 0 ID=cds-WP_059474954.1;Parent=gene-LDO50_RS28265;Dbxref=GenBank:WP_059474954.1;Name=WP_059474954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407267.1;locus_tag=LDO50_RS28265;product=Imm72 family immunity protein;protein_id=WP_059474954.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 34171 34932 . - . ID=gene-LDO50_RS28270;Name=LDO50_RS28270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28270;old_locus_tag=BVI1335_80037 NZ_CAJZAO010000360.1 Protein Homology CDS 34171 34932 . - 0 ID=cds-WP_059560731.1;Parent=gene-LDO50_RS28270;Dbxref=GenBank:WP_059560731.1;Name=WP_059560731.1;Ontology_term=GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882732.1;locus_tag=LDO50_RS28270;product=anti-sigma factor family protein;protein_id=WP_059560731.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 34929 35447 . - . ID=gene-LDO50_RS28275;Name=LDO50_RS28275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28275;old_locus_tag=BVI1335_80038 NZ_CAJZAO010000360.1 Protein Homology CDS 34929 35447 . - 0 ID=cds-WP_224020443.1;Parent=gene-LDO50_RS28275;Dbxref=GenBank:WP_224020443.1;Name=WP_224020443.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011401646.1;locus_tag=LDO50_RS28275;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_224020443.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 35604 36692 . + . ID=gene-LDO50_RS28280;Name=LDO50_RS28280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28280;old_locus_tag=BVI1335_80040 NZ_CAJZAO010000360.1 Protein Homology CDS 35604 36692 . + 0 ID=cds-WP_224020444.1;Parent=gene-LDO50_RS28280;Dbxref=GenBank:WP_224020444.1;Name=WP_224020444.1;Ontology_term=GO:0042542,GO:0004601,GO:0005506,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,iron ion binding|0005506||IEA,heme binding|0020037||IEA;go_process=response to hydrogen peroxide|0042542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750391.1;locus_tag=LDO50_RS28280;product=catalase family peroxidase;protein_id=WP_224020444.1;transl_table=11 NZ_CAJZAO010000360.1 RefSeq gene 36689 37222 . + . ID=gene-LDO50_RS28285;Name=LDO50_RS28285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28285;old_locus_tag=BVI1335_80041 NZ_CAJZAO010000360.1 Protein Homology CDS 36689 37222 . + 0 ID=cds-WP_045578666.1;Parent=gene-LDO50_RS28285;Dbxref=GenBank:WP_045578666.1;Name=WP_045578666.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004541787.1;locus_tag=LDO50_RS28285;product=cytochrome b;protein_id=WP_045578666.1;transl_table=11 ##sequence-region NZ_CAJZAO010000361.1 1 12391 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000361.1 RefSeq region 1 12391 . + . ID=NZ_CAJZAO010000361.1:1..12391;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_80 NZ_CAJZAO010000361.1 RefSeq gene 1 1267 . + . ID=gene-LDO50_RS28290;Name=LDO50_RS28290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28290;old_locus_tag=BVI1335_800001;partial=true;start_range=.,1 NZ_CAJZAO010000361.1 Protein Homology CDS 1 1267 . + 1 ID=cds-WP_224020445.1;Parent=gene-LDO50_RS28290;Dbxref=GenBank:WP_224020445.1;Name=WP_224020445.1;Ontology_term=GO:0022900,GO:0004174,GO:0046872,GO:0051539;gbkey=CDS;go_function=electron-transferring-flavoprotein dehydrogenase activity|0004174||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015003297.1;locus_tag=LDO50_RS28290;partial=true;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=WP_224020445.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000361.1 RefSeq gene 1376 2323 . - . ID=gene-LDO50_RS28295;Name=LDO50_RS28295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28295;old_locus_tag=BVI1335_800002 NZ_CAJZAO010000361.1 Protein Homology CDS 1376 2323 . - 0 ID=cds-WP_059475939.1;Parent=gene-LDO50_RS28295;Dbxref=GenBank:WP_059475939.1;Name=WP_059475939.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656661.1;locus_tag=LDO50_RS28295;product=dihydrodipicolinate synthase family protein;protein_id=WP_059475939.1;transl_table=11 NZ_CAJZAO010000361.1 RefSeq pseudogene 2368 3687 . - . ID=gene-LDO50_RS28300;Name=LDO50_RS28300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS28300;old_locus_tag=BVI1335_800003;pseudo=true NZ_CAJZAO010000361.1 Protein Homology CDS 2368 3687 . - 0 ID=cds-LDO50_RS28300;Parent=gene-LDO50_RS28300;Note=internal stop;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656660.1;locus_tag=LDO50_RS28300;product=MFS transporter;pseudo=true;transl_table=11 NZ_CAJZAO010000361.1 RefSeq gene 3750 4679 . - . ID=gene-LDO50_RS28305;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=LDO50_RS28305;old_locus_tag=BVI1335_800005 NZ_CAJZAO010000361.1 Protein Homology CDS 3750 4679 . - 0 ID=cds-WP_034193324.1;Parent=gene-LDO50_RS28305;Dbxref=GenBank:WP_034193324.1;Name=WP_034193324.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722895.1;locus_tag=LDO50_RS28305;product=ribokinase;protein_id=WP_034193324.1;transl_table=11 NZ_CAJZAO010000361.1 RefSeq gene 4921 5991 . + . ID=gene-LDO50_RS28310;Name=LDO50_RS28310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28310;old_locus_tag=BVI1335_800006 NZ_CAJZAO010000361.1 Protein Homology CDS 4921 5991 . + 0 ID=cds-WP_011884527.1;Parent=gene-LDO50_RS28310;Dbxref=GenBank:WP_011884527.1;Name=WP_011884527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884527.1;locus_tag=LDO50_RS28310;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_011884527.1;transl_table=11 NZ_CAJZAO010000361.1 RefSeq gene 6061 7161 . - . ID=gene-LDO50_RS28315;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=LDO50_RS28315;old_locus_tag=BVI1335_800007 NZ_CAJZAO010000361.1 Protein Homology CDS 6061 7161 . - 0 ID=cds-WP_011884526.1;Parent=gene-LDO50_RS28315;Dbxref=GenBank:WP_011884526.1;Name=WP_011884526.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413771.1;locus_tag=LDO50_RS28315;product=chorismate synthase;protein_id=WP_011884526.1;transl_table=11 NZ_CAJZAO010000361.1 RefSeq gene 7409 9343 . - . ID=gene-LDO50_RS28320;Name=LDO50_RS28320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28320;old_locus_tag=BVI1335_800008 NZ_CAJZAO010000361.1 Protein Homology CDS 7409 9343 . - 0 ID=cds-WP_011884525.1;Parent=gene-LDO50_RS28320;Dbxref=GenBank:WP_011884525.1;Name=WP_011884525.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363715.1;locus_tag=LDO50_RS28320;product=MFS transporter;protein_id=WP_011884525.1;transl_table=11 NZ_CAJZAO010000361.1 RefSeq gene 9480 9935 . - . ID=gene-LDO50_RS28325;Name=LDO50_RS28325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28325;old_locus_tag=BVI1335_800009 NZ_CAJZAO010000361.1 Protein Homology CDS 9480 9935 . - 0 ID=cds-WP_011884523.1;Parent=gene-LDO50_RS28325;Dbxref=GenBank:WP_011884523.1;Name=WP_011884523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488504.1;locus_tag=LDO50_RS28325;product=CBS domain-containing protein;protein_id=WP_011884523.1;transl_table=11 NZ_CAJZAO010000361.1 RefSeq gene 10093 10410 . + . ID=gene-LDO50_RS28330;Name=LDO50_RS28330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28330;old_locus_tag=BVI1335_800010 NZ_CAJZAO010000361.1 Protein Homology CDS 10093 10410 . + 0 ID=cds-WP_011884521.1;Parent=gene-LDO50_RS28330;Dbxref=GenBank:WP_011884521.1;Name=WP_011884521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009905783.1;locus_tag=LDO50_RS28330;product=Mpo1-like protein;protein_id=WP_011884521.1;transl_table=11 NZ_CAJZAO010000361.1 RefSeq gene 10432 11763 . - . ID=gene-LDO50_RS28335;Name=LDO50_RS28335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28335;old_locus_tag=BVI1335_800011 NZ_CAJZAO010000361.1 Protein Homology CDS 10432 11763 . - 0 ID=cds-WP_014722891.1;Parent=gene-LDO50_RS28335;Dbxref=GenBank:WP_014722891.1;Name=WP_014722891.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115728.1;locus_tag=LDO50_RS28335;product=YihY family inner membrane protein;protein_id=WP_014722891.1;transl_table=11 NZ_CAJZAO010000361.1 RefSeq gene 11910 12391 . + . ID=gene-LDO50_RS28340;Name=wrbA;end_range=12391,.;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=LDO50_RS28340;partial=true NZ_CAJZAO010000361.1 Protein Homology CDS 11910 12391 . + 0 ID=cds-WP_224020446.1;Parent=gene-LDO50_RS28340;Dbxref=GenBank:WP_224020446.1;Name=WP_224020446.1;Ontology_term=GO:0003955,GO:0010181;end_range=12391,.;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521696.1;locus_tag=LDO50_RS28340;partial=true;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_224020446.1;transl_table=11 ##sequence-region NZ_CAJZAO010000362.1 1 12834 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000362.1 RefSeq region 1 12834 . + . ID=NZ_CAJZAO010000362.1:1..12834;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_81 NZ_CAJZAO010000362.1 RefSeq gene 1 295 . - . ID=gene-LDO50_RS28345;Name=LDO50_RS28345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28345;partial=true;start_range=.,1 NZ_CAJZAO010000362.1 Protein Homology CDS 1 295 . - 0 ID=cds-WP_224020447.1;Parent=gene-LDO50_RS28345;Dbxref=GenBank:WP_224020447.1;Name=WP_224020447.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481804.1;locus_tag=LDO50_RS28345;partial=true;product=LysR family transcriptional regulator;protein_id=WP_224020447.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000362.1 RefSeq gene 491 1411 . + . ID=gene-LDO50_RS28350;Name=LDO50_RS28350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28350;old_locus_tag=BVI1335_810002 NZ_CAJZAO010000362.1 Protein Homology CDS 491 1411 . + 0 ID=cds-WP_034193328.1;Parent=gene-LDO50_RS28350;Dbxref=GenBank:WP_034193328.1;Name=WP_034193328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656468.1;locus_tag=LDO50_RS28350;product=pyridoxal-phosphate dependent enzyme;protein_id=WP_034193328.1;transl_table=11 NZ_CAJZAO010000362.1 RefSeq pseudogene 2181 3440 . - . ID=gene-LDO50_RS28355;Name=LDO50_RS28355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS28355;old_locus_tag=BVI1335_810004;partial=true;pseudo=true;start_range=.,2181 NZ_CAJZAO010000362.1 Protein Homology CDS 2181 3440 . - 0 ID=cds-LDO50_RS28355;Parent=gene-LDO50_RS28355;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328218.1;locus_tag=LDO50_RS28355;partial=true;product=DUF2242 domain-containing protein;pseudo=true;start_range=.,2181;transl_table=11 NZ_CAJZAO010000362.1 RefSeq gene 3580 4473 . - . ID=gene-LDO50_RS28360;Name=LDO50_RS28360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28360;old_locus_tag=BVI1335_810005 NZ_CAJZAO010000362.1 Protein Homology CDS 3580 4473 . - 0 ID=cds-WP_224020448.1;Parent=gene-LDO50_RS28360;Dbxref=GenBank:WP_224020448.1;Name=WP_224020448.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351568.1;locus_tag=LDO50_RS28360;product=LysR family transcriptional regulator;protein_id=WP_224020448.1;transl_table=11 NZ_CAJZAO010000362.1 RefSeq gene 4581 5336 . + . ID=gene-LDO50_RS28365;Name=LDO50_RS28365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28365;old_locus_tag=BVI1335_810006 NZ_CAJZAO010000362.1 Protein Homology CDS 4581 5336 . + 0 ID=cds-WP_059458847.1;Parent=gene-LDO50_RS28365;Dbxref=GenBank:WP_059458847.1;Name=WP_059458847.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545056.1;locus_tag=LDO50_RS28365;product=TerC family protein;protein_id=WP_059458847.1;transl_table=11 NZ_CAJZAO010000362.1 RefSeq gene 5416 5739 . + . ID=gene-LDO50_RS28370;Name=LDO50_RS28370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28370;old_locus_tag=BVI1335_810007 NZ_CAJZAO010000362.1 Protein Homology CDS 5416 5739 . + 0 ID=cds-WP_175949687.1;Parent=gene-LDO50_RS28370;Dbxref=GenBank:WP_175949687.1;Name=WP_175949687.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328221.1;locus_tag=LDO50_RS28370;product=TFIIB-type zinc ribbon-containing protein;protein_id=WP_175949687.1;transl_table=11 NZ_CAJZAO010000362.1 RefSeq gene 5844 6260 . - . ID=gene-LDO50_RS28375;Name=LDO50_RS28375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28375;old_locus_tag=BVI1335_810008 NZ_CAJZAO010000362.1 Protein Homology CDS 5844 6260 . - 0 ID=cds-WP_011884241.1;Parent=gene-LDO50_RS28375;Dbxref=GenBank:WP_011884241.1;Name=WP_011884241.1;Ontology_term=GO:0009408,GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328222.1;locus_tag=LDO50_RS28375;product=Hsp20/alpha crystallin family protein;protein_id=WP_011884241.1;transl_table=11 NZ_CAJZAO010000362.1 RefSeq gene 6277 6717 . - . ID=gene-LDO50_RS28380;Name=LDO50_RS28380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28380;old_locus_tag=BVI1335_810009 NZ_CAJZAO010000362.1 Protein Homology CDS 6277 6717 . - 0 ID=cds-WP_011884243.1;Parent=gene-LDO50_RS28380;Dbxref=GenBank:WP_011884243.1;Name=WP_011884243.1;Ontology_term=GO:0009408,GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897461.1;locus_tag=LDO50_RS28380;product=Hsp20/alpha crystallin family protein;protein_id=WP_011884243.1;transl_table=11 NZ_CAJZAO010000362.1 RefSeq gene 6932 7780 . - . ID=gene-LDO50_RS28385;Name=LDO50_RS28385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28385;old_locus_tag=BVI1335_810010 NZ_CAJZAO010000362.1 Protein Homology CDS 6932 7780 . - 0 ID=cds-WP_011884244.1;Parent=gene-LDO50_RS28385;Dbxref=GenBank:WP_011884244.1;Name=WP_011884244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754565.1;locus_tag=LDO50_RS28385;product=LysR substrate-binding domain-containing protein;protein_id=WP_011884244.1;transl_table=11 NZ_CAJZAO010000362.1 RefSeq gene 8109 8504 . + . ID=gene-LDO50_RS28390;Name=madL;gbkey=Gene;gene=madL;gene_biotype=protein_coding;locus_tag=LDO50_RS28390;old_locus_tag=BVI1335_810012 NZ_CAJZAO010000362.1 Protein Homology CDS 8109 8504 . + 0 ID=cds-WP_011884246.1;Parent=gene-LDO50_RS28390;Dbxref=GenBank:WP_011884246.1;Name=WP_011884246.1;Ontology_term=GO:0015849,GO:0005342;gbkey=CDS;gene=madL;go_function=organic acid transmembrane transporter activity|0005342||IEA;go_process=organic acid transport|0015849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897457.1;locus_tag=LDO50_RS28390;product=malonate transporter subunit MadL;protein_id=WP_011884246.1;transl_table=11 NZ_CAJZAO010000362.1 RefSeq gene 8516 9283 . + . ID=gene-LDO50_RS28395;Name=madM;gbkey=Gene;gene=madM;gene_biotype=protein_coding;locus_tag=LDO50_RS28395;old_locus_tag=BVI1335_810013 NZ_CAJZAO010000362.1 Protein Homology CDS 8516 9283 . + 0 ID=cds-WP_011884249.1;Parent=gene-LDO50_RS28395;Dbxref=GenBank:WP_011884249.1;Name=WP_011884249.1;Ontology_term=GO:0044668;gbkey=CDS;gene=madM;go_function=sodium:malonate symporter activity|0044668||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363531.1;locus_tag=LDO50_RS28395;product=malonate transporter subunit MadM;protein_id=WP_011884249.1;transl_table=11 NZ_CAJZAO010000362.1 RefSeq gene 9448 11094 . + . ID=gene-LDO50_RS28400;Name=mdcA;gbkey=Gene;gene=mdcA;gene_biotype=protein_coding;locus_tag=LDO50_RS28400;old_locus_tag=BVI1335_810014 NZ_CAJZAO010000362.1 Protein Homology CDS 9448 11094 . + 0 ID=cds-WP_224020449.1;Parent=gene-LDO50_RS28400;Dbxref=GenBank:WP_224020449.1;Name=WP_224020449.1;Ontology_term=GO:0006810,GO:0015451,GO:0016740;gbkey=CDS;gene=mdcA;go_function=decarboxylation-driven active transmembrane transporter activity|0015451||IEA,transferase activity|0016740||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764672.1;locus_tag=LDO50_RS28400;product=malonate decarboxylase subunit alpha;protein_id=WP_224020449.1;transl_table=11 NZ_CAJZAO010000362.1 RefSeq gene 11105 11419 . + . ID=gene-LDO50_RS28405;Name=mdcC;gbkey=Gene;gene=mdcC;gene_biotype=protein_coding;locus_tag=LDO50_RS28405;old_locus_tag=BVI1335_810015 NZ_CAJZAO010000362.1 Protein Homology CDS 11105 11419 . + 0 ID=cds-WP_046428881.1;Parent=gene-LDO50_RS28405;Dbxref=GenBank:WP_046428881.1;Name=WP_046428881.1;gbkey=CDS;gene=mdcC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754569.1;locus_tag=LDO50_RS28405;product=malonate decarboxylase acyl carrier protein;protein_id=WP_046428881.1;transl_table=11 NZ_CAJZAO010000362.1 RefSeq gene 11416 12357 . + . ID=gene-LDO50_RS28410;Name=LDO50_RS28410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28410;old_locus_tag=BVI1335_810016 NZ_CAJZAO010000362.1 Protein Homology CDS 11416 12357 . + 0 ID=cds-WP_224020450.1;Parent=gene-LDO50_RS28410;Dbxref=GenBank:WP_224020450.1;Name=WP_224020450.1;Ontology_term=GO:0005975,GO:0006633,GO:0003989,GO:0016831,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,carboxy-lyase activity|0016831||IEA;go_process=carbohydrate metabolic process|0005975||IEA,fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497631.1;locus_tag=LDO50_RS28410;product=biotin-independent malonate decarboxylase subunit beta;protein_id=WP_224020450.1;transl_table=11 NZ_CAJZAO010000362.1 RefSeq gene 12344 12834 . + . ID=gene-LDO50_RS28415;Name=LDO50_RS28415;end_range=12834,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28415;partial=true NZ_CAJZAO010000362.1 Protein Homology CDS 12344 12834 . + 0 ID=cds-WP_224020451.1;Parent=gene-LDO50_RS28415;Dbxref=GenBank:WP_224020451.1;Name=WP_224020451.1;end_range=12834,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722800.1;locus_tag=LDO50_RS28415;partial=true;product=biotin-independent malonate decarboxylase subunit gamma;protein_id=WP_224020451.1;transl_table=11 ##sequence-region NZ_CAJZAO010000363.1 1 13279 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000363.1 RefSeq region 1 13279 . + . ID=NZ_CAJZAO010000363.1:1..13279;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_82 NZ_CAJZAO010000363.1 RefSeq gene 1 202 . - . ID=gene-LDO50_RS28420;Name=LDO50_RS28420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28420;partial=true;start_range=.,1 NZ_CAJZAO010000363.1 Protein Homology CDS 1 202 . - 0 ID=cds-WP_443797881.1;Parent=gene-LDO50_RS28420;Dbxref=GenBank:WP_443797881.1;Name=WP_443797881.1;Ontology_term=GO:0009055;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189750.1;locus_tag=LDO50_RS28420;partial=true;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_443797881.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000363.1 RefSeq gene 214 1620 . - . ID=gene-LDO50_RS28425;Name=LDO50_RS28425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28425;old_locus_tag=BVI1335_820002 NZ_CAJZAO010000363.1 Protein Homology CDS 214 1620 . - 0 ID=cds-WP_176295970.1;Parent=gene-LDO50_RS28425;Dbxref=GenBank:WP_176295970.1;Name=WP_176295970.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065719.1;locus_tag=LDO50_RS28425;product=FAD-binding oxidoreductase;protein_id=WP_176295970.1;transl_table=11 NZ_CAJZAO010000363.1 RefSeq gene 1617 2948 . - . ID=gene-LDO50_RS28430;Name=LDO50_RS28430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28430;old_locus_tag=BVI1335_820003 NZ_CAJZAO010000363.1 Protein Homology CDS 1617 2948 . - 0 ID=cds-WP_176295969.1;Parent=gene-LDO50_RS28430;Dbxref=GenBank:WP_176295969.1;Name=WP_176295969.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013592157.1;locus_tag=LDO50_RS28430;product=MFS transporter;protein_id=WP_176295969.1;transl_table=11 NZ_CAJZAO010000363.1 RefSeq gene 3069 4007 . + . ID=gene-LDO50_RS28435;Name=LDO50_RS28435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28435;old_locus_tag=BVI1335_820004 NZ_CAJZAO010000363.1 Protein Homology CDS 3069 4007 . + 0 ID=cds-WP_059674757.1;Parent=gene-LDO50_RS28435;Dbxref=GenBank:WP_059674757.1;Name=WP_059674757.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF015431.6;locus_tag=LDO50_RS28435;product=LysR family transcriptional regulator;protein_id=WP_059674757.1;transl_table=11 NZ_CAJZAO010000363.1 RefSeq pseudogene 4606 4735 . + . ID=gene-LDO50_RS28440;Name=LDO50_RS28440;end_range=4735,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS28440;partial=true;pseudo=true NZ_CAJZAO010000363.1 Protein Homology CDS 4606 4735 . + 0 ID=cds-LDO50_RS28440;Parent=gene-LDO50_RS28440;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4735,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611480.1;locus_tag=LDO50_RS28440;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CAJZAO010000363.1 RefSeq gene 4874 5242 . + . ID=gene-LDO50_RS28445;Name=LDO50_RS28445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28445;old_locus_tag=BVI1335_820007 NZ_CAJZAO010000363.1 Protein Homology CDS 4874 5242 . + 0 ID=cds-WP_176295968.1;Parent=gene-LDO50_RS28445;Dbxref=GenBank:WP_176295968.1;Name=WP_176295968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012464980.1;locus_tag=LDO50_RS28445;product=hypothetical protein;protein_id=WP_176295968.1;transl_table=11 NZ_CAJZAO010000363.1 RefSeq gene 5334 6626 . + . ID=gene-LDO50_RS28450;Name=LDO50_RS28450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28450;old_locus_tag=BVI1335_820008 NZ_CAJZAO010000363.1 Protein Homology CDS 5334 6626 . + 0 ID=cds-WP_176295967.1;Parent=gene-LDO50_RS28450;Dbxref=GenBank:WP_176295967.1;Name=WP_176295967.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875591.1;locus_tag=LDO50_RS28450;product=TolC family protein;protein_id=WP_176295967.1;transl_table=11 NZ_CAJZAO010000363.1 RefSeq gene 6638 8155 . + . ID=gene-LDO50_RS28455;Name=LDO50_RS28455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28455;old_locus_tag=BVI1335_820009 NZ_CAJZAO010000363.1 Protein Homology CDS 6638 8155 . + 0 ID=cds-WP_224020452.1;Parent=gene-LDO50_RS28455;Dbxref=GenBank:WP_224020452.1;Name=WP_224020452.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218072.1;locus_tag=LDO50_RS28455;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_224020452.1;transl_table=11 NZ_CAJZAO010000363.1 RefSeq gene 8152 11358 . + . ID=gene-LDO50_RS28460;Name=LDO50_RS28460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28460;old_locus_tag=BVI1335_820010 NZ_CAJZAO010000363.1 Protein Homology CDS 8152 11358 . + 0 ID=cds-WP_176295965.1;Parent=gene-LDO50_RS28460;Dbxref=GenBank:WP_176295965.1;Name=WP_176295965.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012211075.1;locus_tag=LDO50_RS28460;product=efflux RND transporter permease subunit;protein_id=WP_176295965.1;transl_table=11 NZ_CAJZAO010000363.1 RefSeq gene 11355 11705 . + . ID=gene-LDO50_RS28465;Name=LDO50_RS28465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28465;old_locus_tag=BVI1335_820011 NZ_CAJZAO010000363.1 Protein Homology CDS 11355 11705 . + 0 ID=cds-WP_176295964.1;Parent=gene-LDO50_RS28465;Dbxref=GenBank:WP_176295964.1;Name=WP_176295964.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007584674.1;locus_tag=LDO50_RS28465;product=copper-binding protein;protein_id=WP_176295964.1;transl_table=11 NZ_CAJZAO010000363.1 RefSeq gene 11986 12123 . + . ID=gene-LDO50_RS28470;Name=LDO50_RS28470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28470 NZ_CAJZAO010000363.1 GeneMarkS-2+ CDS 11986 12123 . + 0 ID=cds-WP_176295963.1;Parent=gene-LDO50_RS28470;Dbxref=GenBank:WP_176295963.1;Name=WP_176295963.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS28470;product=hypothetical protein;protein_id=WP_176295963.1;transl_table=11 NZ_CAJZAO010000363.1 RefSeq gene 12361 13179 . - . ID=gene-LDO50_RS28475;Name=LDO50_RS28475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28475 NZ_CAJZAO010000363.1 Protein Homology CDS 12361 13179 . - 0 ID=cds-WP_176295997.1;Parent=gene-LDO50_RS28475;Dbxref=GenBank:WP_176295997.1;Name=WP_176295997.1;Ontology_term=GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: protein motif:HMM:NF012742.6;locus_tag=LDO50_RS28475;product=substrate-binding domain-containing protein;protein_id=WP_176295997.1;transl_table=11 ##sequence-region NZ_CAJZAO010000364.1 1 65501 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000364.1 RefSeq region 1 65501 . + . ID=NZ_CAJZAO010000364.1:1..65501;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_83 NZ_CAJZAO010000364.1 RefSeq pseudogene 1 415 . - . ID=gene-LDO50_RS28480;Name=LDO50_RS28480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS28480;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000364.1 Protein Homology CDS 1 415 . - 0 ID=cds-LDO50_RS28480;Parent=gene-LDO50_RS28480;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749985.1;locus_tag=LDO50_RS28480;partial=true;product=sensor histidine kinase N-terminal domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 419 1081 . - . ID=gene-LDO50_RS28485;Name=LDO50_RS28485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28485;old_locus_tag=BVI1335_830002 NZ_CAJZAO010000364.1 Protein Homology CDS 419 1081 . - 0 ID=cds-WP_011885900.1;Parent=gene-LDO50_RS28485;Dbxref=GenBank:WP_011885900.1;Name=WP_011885900.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189255.1;locus_tag=LDO50_RS28485;product=response regulator;protein_id=WP_011885900.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 1265 2806 . + . ID=gene-LDO50_RS28490;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=LDO50_RS28490;old_locus_tag=BVI1335_830003 NZ_CAJZAO010000364.1 Protein Homology CDS 1265 2806 . + 0 ID=cds-WP_011885901.1;Parent=gene-LDO50_RS28490;Dbxref=GenBank:WP_011885901.1;Name=WP_011885901.1;Ontology_term=GO:0009252,GO:0004175,GO:0009002;gbkey=CDS;gene=dacB;go_function=endopeptidase activity|0004175||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477951.1;locus_tag=LDO50_RS28490;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine endopeptidase;protein_id=WP_011885901.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 3383 4297 . + . ID=gene-LDO50_RS28495;Name=LDO50_RS28495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28495;old_locus_tag=BVI1335_830005 NZ_CAJZAO010000364.1 Protein Homology CDS 3383 4297 . + 0 ID=cds-WP_011885902.1;Parent=gene-LDO50_RS28495;Dbxref=GenBank:WP_011885902.1;Name=WP_011885902.1;Ontology_term=GO:0006629,GO:0008610,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=lipid metabolic process|0006629||IEA,lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398415.1;locus_tag=LDO50_RS28495;product=sterol desaturase family protein;protein_id=WP_011885902.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 4393 5529 . + . ID=gene-LDO50_RS28500;Name=LDO50_RS28500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28500;old_locus_tag=BVI1335_830006 NZ_CAJZAO010000364.1 Protein Homology CDS 4393 5529 . + 0 ID=cds-WP_045578822.1;Parent=gene-LDO50_RS28500;Dbxref=GenBank:WP_045578822.1;Name=WP_045578822.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364608.1;locus_tag=LDO50_RS28500;product=SGNH/GDSL hydrolase family protein;protein_id=WP_045578822.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 5629 6666 . - . ID=gene-LDO50_RS28505;Name=LDO50_RS28505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28505;old_locus_tag=BVI1335_830007 NZ_CAJZAO010000364.1 Protein Homology CDS 5629 6666 . - 0 ID=cds-WP_011885904.1;Parent=gene-LDO50_RS28505;Dbxref=GenBank:WP_011885904.1;Name=WP_011885904.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885904.1;locus_tag=LDO50_RS28505;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_011885904.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 6678 7874 . - . ID=gene-LDO50_RS28510;Name=LDO50_RS28510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28510;old_locus_tag=BVI1335_830008 NZ_CAJZAO010000364.1 Protein Homology CDS 6678 7874 . - 0 ID=cds-WP_011885905.1;Parent=gene-LDO50_RS28510;Dbxref=GenBank:WP_011885905.1;Name=WP_011885905.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398412.1;locus_tag=LDO50_RS28510;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_011885905.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 7950 8471 . - . ID=gene-LDO50_RS28515;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=LDO50_RS28515;old_locus_tag=BVI1335_830009 NZ_CAJZAO010000364.1 Protein Homology CDS 7950 8471 . - 0 ID=cds-WP_011885906.1;Parent=gene-LDO50_RS28515;Dbxref=GenBank:WP_011885906.1;Name=WP_011885906.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749978.1;locus_tag=LDO50_RS28515;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_011885906.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 8488 9378 . - . ID=gene-LDO50_RS28520;Name=LDO50_RS28520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28520;old_locus_tag=BVI1335_830010 NZ_CAJZAO010000364.1 Protein Homology CDS 8488 9378 . - 0 ID=cds-WP_014723567.1;Parent=gene-LDO50_RS28520;Dbxref=GenBank:WP_014723567.1;Name=WP_014723567.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723567.1;locus_tag=LDO50_RS28520;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_014723567.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 9606 10670 . - . ID=gene-LDO50_RS28525;Name=fba;gbkey=Gene;gene=fba;gene_biotype=protein_coding;locus_tag=LDO50_RS28525;old_locus_tag=BVI1335_830011 NZ_CAJZAO010000364.1 Protein Homology CDS 9606 10670 . - 0 ID=cds-WP_014723568.1;Parent=gene-LDO50_RS28525;Dbxref=GenBank:WP_014723568.1;Name=WP_014723568.1;Note=catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle%2C glycolysis%2C and/or gluconeogenesis;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;gene=fba;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013589515.1;locus_tag=LDO50_RS28525;product=class II fructose-bisphosphate aldolase;protein_id=WP_014723568.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 10968 12404 . - . ID=gene-LDO50_RS28530;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=LDO50_RS28530;old_locus_tag=BVI1335_830012 NZ_CAJZAO010000364.1 Protein Homology CDS 10968 12404 . - 0 ID=cds-WP_011885909.1;Parent=gene-LDO50_RS28530;Dbxref=GenBank:WP_011885909.1;Name=WP_011885909.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188973.1;locus_tag=LDO50_RS28530;product=pyruvate kinase;protein_id=WP_011885909.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 12403 12531 . + . ID=gene-LDO50_RS30920;Name=LDO50_RS30920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30920 NZ_CAJZAO010000364.1 GeneMarkS-2+ CDS 12403 12531 . + 0 ID=cds-WP_257785811.1;Parent=gene-LDO50_RS30920;Dbxref=GenBank:WP_257785811.1;Name=WP_257785811.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS30920;product=hypothetical protein;protein_id=WP_257785811.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 12689 13885 . - . ID=gene-LDO50_RS28535;Name=LDO50_RS28535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28535;old_locus_tag=BVI1335_830013 NZ_CAJZAO010000364.1 Protein Homology CDS 12689 13885 . - 0 ID=cds-WP_011885910.1;Parent=gene-LDO50_RS28535;Dbxref=GenBank:WP_011885910.1;Name=WP_011885910.1;Ontology_term=GO:0006094,GO:0006096,GO:0000166,GO:0004618;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,phosphoglycerate kinase activity|0004618||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699247.1;locus_tag=LDO50_RS28535;product=phosphoglycerate kinase;protein_id=WP_011885910.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 14165 14488 . - . ID=gene-LDO50_RS28540;Name=LDO50_RS28540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28540;old_locus_tag=BVI1335_830014 NZ_CAJZAO010000364.1 Protein Homology CDS 14165 14488 . - 0 ID=cds-WP_011885911.1;Parent=gene-LDO50_RS28540;Dbxref=GenBank:WP_011885911.1;Name=WP_011885911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010101895.1;locus_tag=LDO50_RS28540;product=AzlD domain-containing protein;protein_id=WP_011885911.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 14485 15240 . - . ID=gene-LDO50_RS28545;Name=LDO50_RS28545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28545;old_locus_tag=BVI1335_830015 NZ_CAJZAO010000364.1 Protein Homology CDS 14485 15240 . - 0 ID=cds-WP_011885912.1;Parent=gene-LDO50_RS28545;Dbxref=GenBank:WP_011885912.1;Name=WP_011885912.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364614.1;locus_tag=LDO50_RS28545;product=AzlC family ABC transporter permease;protein_id=WP_011885912.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 15448 16371 . + . ID=gene-LDO50_RS28550;Name=LDO50_RS28550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28550;old_locus_tag=BVI1335_830016 NZ_CAJZAO010000364.1 Protein Homology CDS 15448 16371 . + 0 ID=cds-WP_011885913.1;Parent=gene-LDO50_RS28550;Dbxref=GenBank:WP_011885913.1;Name=WP_011885913.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069237.1;locus_tag=LDO50_RS28550;product=branched-chain amino acid transaminase;protein_id=WP_011885913.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 16422 16616 . + . ID=gene-LDO50_RS28555;Name=LDO50_RS28555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28555;old_locus_tag=BVI1335_830017 NZ_CAJZAO010000364.1 Protein Homology CDS 16422 16616 . + 0 ID=cds-WP_006749970.1;Parent=gene-LDO50_RS28555;Dbxref=GenBank:WP_006749970.1;Name=WP_006749970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180502.1;locus_tag=LDO50_RS28555;product=zinc-finger domain-containing protein;protein_id=WP_006749970.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 16756 17793 . + . ID=gene-LDO50_RS28560;Name=waaF;gbkey=Gene;gene=waaF;gene_biotype=protein_coding;locus_tag=LDO50_RS28560;old_locus_tag=BVI1335_830019 NZ_CAJZAO010000364.1 Protein Homology CDS 16756 17793 . + 0 ID=cds-WP_224020454.1;Parent=gene-LDO50_RS28560;Dbxref=GenBank:WP_224020454.1;Name=WP_224020454.1;Ontology_term=GO:0009103,GO:0008920,GO:0016757;gbkey=CDS;gene=waaF;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA,glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011401829.1;locus_tag=LDO50_RS28560;product=lipopolysaccharide heptosyltransferase II;protein_id=WP_224020454.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 17909 18355 . + . ID=gene-LDO50_RS28565;Name=LDO50_RS28565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28565;old_locus_tag=BVI1335_830020 NZ_CAJZAO010000364.1 Protein Homology CDS 17909 18355 . + 0 ID=cds-WP_006749968.1;Parent=gene-LDO50_RS28565;Dbxref=GenBank:WP_006749968.1;Name=WP_006749968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090801.1;locus_tag=LDO50_RS28565;product=nuclear transport factor 2 family protein;protein_id=WP_006749968.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 18390 19427 . + . ID=gene-LDO50_RS28570;Name=LDO50_RS28570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28570;old_locus_tag=BVI1335_830021 NZ_CAJZAO010000364.1 Protein Homology CDS 18390 19427 . + 0 ID=cds-WP_011885915.1;Parent=gene-LDO50_RS28570;Dbxref=GenBank:WP_011885915.1;Name=WP_011885915.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189905.1;locus_tag=LDO50_RS28570;product=hydrolase;protein_id=WP_011885915.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 19420 20049 . + . ID=gene-LDO50_RS28575;Name=LDO50_RS28575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28575;old_locus_tag=BVI1335_830022 NZ_CAJZAO010000364.1 Protein Homology CDS 19420 20049 . + 0 ID=cds-WP_060091537.1;Parent=gene-LDO50_RS28575;Dbxref=GenBank:WP_060091537.1;Name=WP_060091537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885916.1;locus_tag=LDO50_RS28575;product=DUF2946 family protein;protein_id=WP_060091537.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 20080 21774 . - . ID=gene-LDO50_RS28580;Name=LDO50_RS28580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28580;old_locus_tag=BVI1335_830023 NZ_CAJZAO010000364.1 Protein Homology CDS 20080 21774 . - 0 ID=cds-WP_014723571.1;Parent=gene-LDO50_RS28580;Dbxref=GenBank:WP_014723571.1;Name=WP_014723571.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723571.1;locus_tag=LDO50_RS28580;product=M48 family metalloprotease;protein_id=WP_014723571.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 22108 22596 . + . ID=gene-LDO50_RS28585;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=LDO50_RS28585;old_locus_tag=BVI1335_830024 NZ_CAJZAO010000364.1 Protein Homology CDS 22108 22596 . + 0 ID=cds-WP_034192668.1;Parent=gene-LDO50_RS28585;Dbxref=GenBank:WP_034192668.1;Name=WP_034192668.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885918.1;locus_tag=LDO50_RS28585;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_034192668.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 22814 24049 . + . ID=gene-LDO50_RS28590;Name=LDO50_RS28590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28590;old_locus_tag=BVI1335_830025 NZ_CAJZAO010000364.1 Protein Homology CDS 22814 24049 . + 0 ID=cds-WP_081065412.1;Parent=gene-LDO50_RS28590;Dbxref=GenBank:WP_081065412.1;Name=WP_081065412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723573.1;locus_tag=LDO50_RS28590;product=WD40/YVTN/BNR-like repeat-containing protein;protein_id=WP_081065412.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 24456 25685 . + . ID=gene-LDO50_RS28595;Name=LDO50_RS28595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28595;old_locus_tag=BVI1335_830027 NZ_CAJZAO010000364.1 Protein Homology CDS 24456 25685 . + 0 ID=cds-WP_224020455.1;Parent=gene-LDO50_RS28595;Dbxref=GenBank:WP_224020455.1;Name=WP_224020455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477923.1;locus_tag=LDO50_RS28595;product=WD40/YVTN/BNR-like repeat-containing protein;protein_id=WP_224020455.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 25909 27081 . + . ID=gene-LDO50_RS28600;Name=LDO50_RS28600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28600;old_locus_tag=BVI1335_830028 NZ_CAJZAO010000364.1 Protein Homology CDS 25909 27081 . + 0 ID=cds-WP_224020456.1;Parent=gene-LDO50_RS28600;Dbxref=GenBank:WP_224020456.1;Name=WP_224020456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723574.1;locus_tag=LDO50_RS28600;product=WD40/YVTN/BNR-like repeat-containing protein;protein_id=WP_224020456.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 27252 27602 . - . ID=gene-LDO50_RS28605;Name=LDO50_RS28605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28605;old_locus_tag=BVI1335_830029 NZ_CAJZAO010000364.1 Protein Homology CDS 27252 27602 . - 0 ID=cds-WP_041493884.1;Parent=gene-LDO50_RS28605;Dbxref=GenBank:WP_041493884.1;Name=WP_041493884.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759663.1;locus_tag=LDO50_RS28605;product=TonB family protein;protein_id=WP_041493884.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 28012 29790 . - . ID=gene-LDO50_RS28610;Name=LDO50_RS28610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28610;old_locus_tag=BVI1335_830030 NZ_CAJZAO010000364.1 Protein Homology CDS 28012 29790 . - 0 ID=cds-WP_043291527.1;Parent=gene-LDO50_RS28610;Dbxref=GenBank:WP_043291527.1;Name=WP_043291527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657828.1;locus_tag=LDO50_RS28610;product=PglL family O-oligosaccharyltransferase;protein_id=WP_043291527.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 29944 30540 . - . ID=gene-LDO50_RS28615;Name=LDO50_RS28615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28615;old_locus_tag=BVI1335_830031 NZ_CAJZAO010000364.1 Protein Homology CDS 29944 30540 . - 0 ID=cds-WP_011885922.1;Parent=gene-LDO50_RS28615;Dbxref=GenBank:WP_011885922.1;Name=WP_011885922.1;Ontology_term=GO:0007155,GO:0015628,GO:0009289,GO:0015627;gbkey=CDS;go_component=pilus|0009289||IEA,type II protein secretion system complex|0015627||IEA;go_process=cell adhesion|0007155||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885922.1;locus_tag=LDO50_RS28615;product=pilin;protein_id=WP_011885922.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 30639 31343 . - . ID=gene-LDO50_RS28620;Name=LDO50_RS28620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28620;old_locus_tag=BVI1335_830032 NZ_CAJZAO010000364.1 Protein Homology CDS 30639 31343 . - 0 ID=cds-WP_059458264.1;Parent=gene-LDO50_RS28620;Dbxref=GenBank:WP_059458264.1;Name=WP_059458264.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497345.1;locus_tag=LDO50_RS28620;product=TerC family protein;protein_id=WP_059458264.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 31503 32384 . - . ID=gene-LDO50_RS28625;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=LDO50_RS28625;old_locus_tag=BVI1335_830033 NZ_CAJZAO010000364.1 Protein Homology CDS 31503 32384 . - 0 ID=cds-WP_010090788.1;Parent=gene-LDO50_RS28625;Dbxref=GenBank:WP_010090788.1;Name=WP_010090788.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006049960.1;locus_tag=LDO50_RS28625;product=succinate--CoA ligase subunit alpha;protein_id=WP_010090788.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 32453 33619 . - . ID=gene-LDO50_RS28630;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=LDO50_RS28630;old_locus_tag=BVI1335_830034 NZ_CAJZAO010000364.1 Protein Homology CDS 32453 33619 . - 0 ID=cds-WP_011885925.1;Parent=gene-LDO50_RS28630;Dbxref=GenBank:WP_011885925.1;Name=WP_011885925.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486694.1;locus_tag=LDO50_RS28630;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_011885925.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 33688 34296 . - . ID=gene-LDO50_RS28635;Name=LDO50_RS28635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28635;old_locus_tag=BVI1335_830035 NZ_CAJZAO010000364.1 Protein Homology CDS 33688 34296 . - 0 ID=cds-WP_011885926.1;Parent=gene-LDO50_RS28635;Dbxref=GenBank:WP_011885926.1;Name=WP_011885926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657830.1;locus_tag=LDO50_RS28635;product=DUF2889 domain-containing protein;protein_id=WP_011885926.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 34443 35300 . - . ID=gene-LDO50_RS28640;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=LDO50_RS28640;old_locus_tag=BVI1335_830036 NZ_CAJZAO010000364.1 Protein Homology CDS 34443 35300 . - 0 ID=cds-WP_014723581.1;Parent=gene-LDO50_RS28640;Dbxref=GenBank:WP_014723581.1;Name=WP_014723581.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477914.1;locus_tag=LDO50_RS28640;product=recombination regulator RecX;protein_id=WP_014723581.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 35300 36370 . - . ID=gene-LDO50_RS28645;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=LDO50_RS28645;old_locus_tag=BVI1335_830037 NZ_CAJZAO010000364.1 Protein Homology CDS 35300 36370 . - 0 ID=cds-WP_011885928.1;Parent=gene-LDO50_RS28645;Dbxref=GenBank:WP_011885928.1;Name=WP_011885928.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189458.1;locus_tag=LDO50_RS28645;product=recombinase RecA;protein_id=WP_011885928.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 36559 37290 . + . ID=gene-LDO50_RS28650;Name=LDO50_RS28650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28650;old_locus_tag=BVI1335_830039 NZ_CAJZAO010000364.1 Protein Homology CDS 36559 37290 . + 0 ID=cds-WP_011885929.1;Parent=gene-LDO50_RS28650;Dbxref=GenBank:WP_011885929.1;Name=WP_011885929.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334087.1;locus_tag=LDO50_RS28650;product=response regulator transcription factor;protein_id=WP_011885929.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 37308 38855 . + . ID=gene-LDO50_RS28655;Name=LDO50_RS28655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28655;old_locus_tag=BVI1335_830038 NZ_CAJZAO010000364.1 Protein Homology CDS 37308 38855 . + 0 ID=cds-WP_014723583.1;Parent=gene-LDO50_RS28655;Dbxref=GenBank:WP_014723583.1;Name=WP_014723583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329170.1;locus_tag=LDO50_RS28655;product=sensor histidine kinase;protein_id=WP_014723583.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 39072 40730 . + . ID=gene-LDO50_RS28660;Name=LDO50_RS28660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28660;old_locus_tag=BVI1335_830040 NZ_CAJZAO010000364.1 Protein Homology CDS 39072 40730 . + 0 ID=cds-WP_011885931.1;Parent=gene-LDO50_RS28660;Dbxref=GenBank:WP_011885931.1;Name=WP_011885931.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546128.1;locus_tag=LDO50_RS28660;product=MFS transporter;protein_id=WP_011885931.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 40859 40935 . + . ID=gene-LDO50_RS28665;Name=LDO50_RS28665;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS28665;old_locus_tag=BVI1335_TRNA6 NZ_CAJZAO010000364.1 tRNAscan-SE tRNA 40859 40935 . + . ID=rna-LDO50_RS28665;Parent=gene-LDO50_RS28665;anticodon=(pos:40893..40895);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS28665;product=tRNA-Met NZ_CAJZAO010000364.1 tRNAscan-SE exon 40859 40935 . + . ID=exon-LDO50_RS28665-1;Parent=rna-LDO50_RS28665;anticodon=(pos:40893..40895);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS28665;product=tRNA-Met NZ_CAJZAO010000364.1 RefSeq gene 41027 42067 . - . ID=gene-LDO50_RS28670;Name=LDO50_RS28670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28670;old_locus_tag=BVI1335_830041 NZ_CAJZAO010000364.1 Protein Homology CDS 41027 42067 . - 0 ID=cds-WP_224020457.1;Parent=gene-LDO50_RS28670;Dbxref=GenBank:WP_224020457.1;Name=WP_224020457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018005396.1;locus_tag=LDO50_RS28670;product=phage integrase;protein_id=WP_224020457.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 42076 42966 . - . ID=gene-LDO50_RS28675;Name=LDO50_RS28675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28675;old_locus_tag=BVI1335_830042 NZ_CAJZAO010000364.1 Protein Homology CDS 42076 42966 . - 0 ID=cds-WP_224020468.1;Parent=gene-LDO50_RS28675;Dbxref=GenBank:WP_224020468.1;Name=WP_224020468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910519.1;locus_tag=LDO50_RS28675;product=rolling circle replication-associated protein;protein_id=WP_224020468.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 43414 44910 . - . ID=gene-LDO50_RS28680;Name=LDO50_RS28680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28680;old_locus_tag=BVI1335_830043 NZ_CAJZAO010000364.1 Protein Homology CDS 43414 44910 . - 0 ID=cds-WP_224020458.1;Parent=gene-LDO50_RS28680;Dbxref=GenBank:WP_224020458.1;Name=WP_224020458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011205301.1;locus_tag=LDO50_RS28680;product=type II secretion system protein GspD;protein_id=WP_224020458.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 44907 45848 . - . ID=gene-LDO50_RS28685;Name=LDO50_RS28685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28685;old_locus_tag=BVI1335_830044 NZ_CAJZAO010000364.1 Protein Homology CDS 44907 45848 . - 0 ID=cds-WP_224020459.1;Parent=gene-LDO50_RS28685;Dbxref=GenBank:WP_224020459.1;Name=WP_224020459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254943.1;locus_tag=LDO50_RS28685;product=zonular occludens toxin domain-containing protein;protein_id=WP_224020459.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 45845 46123 . - . ID=gene-LDO50_RS28690;Name=LDO50_RS28690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28690;old_locus_tag=BVI1335_830045 NZ_CAJZAO010000364.1 Protein Homology CDS 45845 46123 . - 0 ID=cds-WP_224020460.1;Parent=gene-LDO50_RS28690;Dbxref=GenBank:WP_224020460.1;Name=WP_224020460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910525.1;locus_tag=LDO50_RS28690;product=DUF2523 domain-containing protein;protein_id=WP_224020460.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 46245 47762 . - . ID=gene-LDO50_RS28695;Name=LDO50_RS28695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28695;old_locus_tag=BVI1335_830047 NZ_CAJZAO010000364.1 Protein Homology CDS 46245 47762 . - 0 ID=cds-WP_224020461.1;Parent=gene-LDO50_RS28695;Dbxref=GenBank:WP_224020461.1;Name=WP_224020461.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017432.6;locus_tag=LDO50_RS28695;product=virulence factor TspB C-terminal domain-related protein;protein_id=WP_224020461.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 48173 48394 . - . ID=gene-LDO50_RS28700;Name=LDO50_RS28700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28700;old_locus_tag=BVI1335_830049 NZ_CAJZAO010000364.1 Protein Homology CDS 48173 48394 . - 0 ID=cds-WP_045600791.1;Parent=gene-LDO50_RS28700;Dbxref=GenBank:WP_045600791.1;Name=WP_045600791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910444.1;locus_tag=LDO50_RS28700;product=major capsid protein;protein_id=WP_045600791.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 48422 48601 . - . ID=gene-LDO50_RS28705;Name=LDO50_RS28705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28705;old_locus_tag=BVI1335_830050 NZ_CAJZAO010000364.1 Protein Homology CDS 48422 48601 . - 0 ID=cds-WP_045599613.1;Parent=gene-LDO50_RS28705;Dbxref=GenBank:WP_045599613.1;Name=WP_045599613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910442.1;locus_tag=LDO50_RS28705;product=hypothetical protein;protein_id=WP_045599613.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 48605 48949 . - . ID=gene-LDO50_RS28710;Name=LDO50_RS28710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28710;old_locus_tag=BVI1335_830051 NZ_CAJZAO010000364.1 GeneMarkS-2+ CDS 48605 48949 . - 0 ID=cds-WP_045599615.1;Parent=gene-LDO50_RS28710;Dbxref=GenBank:WP_045599615.1;Name=WP_045599615.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS28710;product=hypothetical protein;protein_id=WP_045599615.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 49349 50038 . + . ID=gene-LDO50_RS28720;Name=LDO50_RS28720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28720;old_locus_tag=BVI1335_830054 NZ_CAJZAO010000364.1 GeneMarkS-2+ CDS 49349 50038 . + 0 ID=cds-WP_224020462.1;Parent=gene-LDO50_RS28720;Dbxref=GenBank:WP_224020462.1;Name=WP_224020462.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS28720;product=hypothetical protein;protein_id=WP_224020462.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 50137 50424 . - . ID=gene-LDO50_RS28725;Name=LDO50_RS28725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28725 NZ_CAJZAO010000364.1 Protein Homology CDS 50137 50424 . - 0 ID=cds-WP_224020463.1;Parent=gene-LDO50_RS28725;Dbxref=GenBank:WP_224020463.1;Name=WP_224020463.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037437.6;locus_tag=LDO50_RS28725;product=antitoxin VbhA family protein;protein_id=WP_224020463.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 50527 50895 . - . ID=gene-LDO50_RS28730;Name=LDO50_RS28730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28730;old_locus_tag=BVI1335_830056 NZ_CAJZAO010000364.1 GeneMarkS-2+ CDS 50527 50895 . - 0 ID=cds-WP_224020464.1;Parent=gene-LDO50_RS28730;Dbxref=GenBank:WP_224020464.1;Name=WP_224020464.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS28730;product=hypothetical protein;protein_id=WP_224020464.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 50874 51620 . - . ID=gene-LDO50_RS28735;Name=LDO50_RS28735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28735;old_locus_tag=BVI1335_830057 NZ_CAJZAO010000364.1 Protein Homology CDS 50874 51620 . - 0 ID=cds-WP_224020465.1;Parent=gene-LDO50_RS28735;Dbxref=GenBank:WP_224020465.1;Name=WP_224020465.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03830.1;locus_tag=LDO50_RS28735;product=type II TA system antitoxin MqsA family protein;protein_id=WP_224020465.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 52704 53186 . - . ID=gene-LDO50_RS31010;Name=LDO50_RS31010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31010;old_locus_tag=BVI1335_830062 NZ_CAJZAO010000364.1 GeneMarkS-2+ CDS 52704 53186 . - 0 ID=cds-WP_308117661.1;Parent=gene-LDO50_RS31010;Dbxref=GenBank:WP_308117661.1;Name=WP_308117661.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS31010;product=hypothetical protein;protein_id=WP_308117661.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 53239 55014 . - . ID=gene-LDO50_RS28745;Name=LDO50_RS28745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28745;old_locus_tag=BVI1335_830064 NZ_CAJZAO010000364.1 Protein Homology CDS 53239 55014 . - 0 ID=cds-WP_224020466.1;Parent=gene-LDO50_RS28745;Dbxref=GenBank:WP_224020466.1;Name=WP_224020466.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010120070.1;locus_tag=LDO50_RS28745;product=SWIM zinc finger family protein;protein_id=WP_224020466.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 55366 56340 . - . ID=gene-LDO50_RS28750;Name=LDO50_RS28750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28750;old_locus_tag=BVI1335_830066 NZ_CAJZAO010000364.1 Protein Homology CDS 55366 56340 . - 0 ID=cds-WP_014723586.1;Parent=gene-LDO50_RS28750;Dbxref=GenBank:WP_014723586.1;Name=WP_014723586.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723586.1;locus_tag=LDO50_RS28750;product=LysR family transcriptional regulator;protein_id=WP_014723586.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 56537 57505 . - . ID=gene-LDO50_RS28755;Name=LDO50_RS28755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28755;old_locus_tag=BVI1335_830067 NZ_CAJZAO010000364.1 Protein Homology CDS 56537 57505 . - 0 ID=cds-WP_011885934.1;Parent=gene-LDO50_RS28755;Dbxref=GenBank:WP_011885934.1;Name=WP_011885934.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896144.1;locus_tag=LDO50_RS28755;product=GlxA family transcriptional regulator;protein_id=WP_011885934.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 57623 58306 . + . ID=gene-LDO50_RS28760;Name=LDO50_RS28760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28760;old_locus_tag=BVI1335_830068 NZ_CAJZAO010000364.1 Protein Homology CDS 57623 58306 . + 0 ID=cds-WP_011885935.1;Parent=gene-LDO50_RS28760;Dbxref=GenBank:WP_011885935.1;Name=WP_011885935.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406515.1;locus_tag=LDO50_RS28760;product=DJ-1/PfpI family protein;protein_id=WP_011885935.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 58399 58710 . + . ID=gene-LDO50_RS28765;Name=LDO50_RS28765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28765;old_locus_tag=BVI1335_830069 NZ_CAJZAO010000364.1 Protein Homology CDS 58399 58710 . + 0 ID=cds-WP_011885936.1;Parent=gene-LDO50_RS28765;Dbxref=GenBank:WP_011885936.1;Name=WP_011885936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546132.1;locus_tag=LDO50_RS28765;product=cupin domain-containing protein;protein_id=WP_011885936.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 58868 59260 . - . ID=gene-LDO50_RS28770;Name=LDO50_RS28770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28770;old_locus_tag=BVI1335_830070 NZ_CAJZAO010000364.1 Protein Homology CDS 58868 59260 . - 0 ID=cds-WP_011885937.1;Parent=gene-LDO50_RS28770;Dbxref=GenBank:WP_011885937.1;Name=WP_011885937.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885937.1;locus_tag=LDO50_RS28770;product=MAPEG family protein;protein_id=WP_011885937.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 59565 62657 . + . ID=gene-LDO50_RS28775;Name=LDO50_RS28775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28775;old_locus_tag=BVI1335_830072 NZ_CAJZAO010000364.1 Protein Homology CDS 59565 62657 . + 0 ID=cds-WP_059888395.1;Parent=gene-LDO50_RS28775;Dbxref=GenBank:WP_059888395.1;Name=WP_059888395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885938.1;locus_tag=LDO50_RS28775;product=transglycosylase domain-containing protein;protein_id=WP_059888395.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 62703 63050 . - . ID=gene-LDO50_RS28780;Name=LDO50_RS28780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28780;old_locus_tag=BVI1335_830073 NZ_CAJZAO010000364.1 Protein Homology CDS 62703 63050 . - 0 ID=cds-WP_011885939.1;Parent=gene-LDO50_RS28780;Dbxref=GenBank:WP_011885939.1;Name=WP_011885939.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885939.1;locus_tag=LDO50_RS28780;product=GFA family protein;protein_id=WP_011885939.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 63302 64006 . - . ID=gene-LDO50_RS28785;Name=LDO50_RS28785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28785;old_locus_tag=BVI1335_830074 NZ_CAJZAO010000364.1 Protein Homology CDS 63302 64006 . - 0 ID=cds-WP_011885940.1;Parent=gene-LDO50_RS28785;Dbxref=GenBank:WP_011885940.1;Name=WP_011885940.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757977.1;locus_tag=LDO50_RS28785;product=FadR/GntR family transcriptional regulator;protein_id=WP_011885940.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq gene 64141 65289 . + . ID=gene-LDO50_RS28790;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=LDO50_RS28790;old_locus_tag=BVI1335_830075 NZ_CAJZAO010000364.1 Protein Homology CDS 64141 65289 . + 0 ID=cds-WP_011885941.1;Parent=gene-LDO50_RS28790;Dbxref=GenBank:WP_011885941.1;Name=WP_011885941.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018437736.1;locus_tag=LDO50_RS28790;product=galactonate dehydratase;protein_id=WP_011885941.1;transl_table=11 NZ_CAJZAO010000364.1 RefSeq pseudogene 65416 65501 . - . ID=gene-LDO50_RS28795;Name=LDO50_RS28795;end_range=65501,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS28795;old_locus_tag=BVI1335_830076;partial=true;pseudo=true NZ_CAJZAO010000364.1 Protein Homology CDS 65416 65501 . - 2 ID=cds-LDO50_RS28795;Parent=gene-LDO50_RS28795;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=65501,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657850.1;locus_tag=LDO50_RS28795;partial=true;product=CopD family protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000365.1 1 24278 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000365.1 RefSeq region 1 24278 . + . ID=NZ_CAJZAO010000365.1:1..24278;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_84 NZ_CAJZAO010000365.1 RefSeq pseudogene 1 120 . - . ID=gene-LDO50_RS28800;Name=LDO50_RS28800;end_range=120,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS28800;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000365.1 Protein Homology CDS 1 120 . - 2 ID=cds-LDO50_RS28800;Parent=gene-LDO50_RS28800;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=120,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880719.1;locus_tag=LDO50_RS28800;partial=true;product=AraC family transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 131 1268 . - . ID=gene-LDO50_RS28805;Name=LDO50_RS28805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28805;old_locus_tag=BVI1335_840001;partial=true;start_range=.,131 NZ_CAJZAO010000365.1 Protein Homology CDS 131 1268 . - 0 ID=cds-WP_224020471.1;Parent=gene-LDO50_RS28805;Dbxref=GenBank:WP_224020471.1;Name=WP_224020471.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007176061.1;locus_tag=LDO50_RS28805;partial=true;product=aspartate aminotransferase family protein;protein_id=WP_224020471.1;start_range=.,131;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 1345 2229 . + . ID=gene-LDO50_RS28810;Name=LDO50_RS28810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28810;old_locus_tag=BVI1335_840002 NZ_CAJZAO010000365.1 Protein Homology CDS 1345 2229 . + 0 ID=cds-WP_176000124.1;Parent=gene-LDO50_RS28810;Dbxref=GenBank:WP_176000124.1;Name=WP_176000124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493511.1;locus_tag=LDO50_RS28810;product=LysR family transcriptional regulator;protein_id=WP_176000124.1;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 2759 4048 . + . ID=gene-LDO50_RS28815;Name=LDO50_RS28815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28815;old_locus_tag=BVI1335_840003 NZ_CAJZAO010000365.1 Protein Homology CDS 2759 4048 . + 0 ID=cds-WP_224020469.1;Parent=gene-LDO50_RS28815;Dbxref=GenBank:WP_224020469.1;Name=WP_224020469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723934.1;locus_tag=LDO50_RS28815;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_224020469.1;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 4300 4941 . - . ID=gene-LDO50_RS28820;Name=LDO50_RS28820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28820;old_locus_tag=BVI1335_840004 NZ_CAJZAO010000365.1 Protein Homology CDS 4300 4941 . - 0 ID=cds-WP_011880715.1;Parent=gene-LDO50_RS28820;Dbxref=GenBank:WP_011880715.1;Name=WP_011880715.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216579.1;locus_tag=LDO50_RS28820;product=response regulator;protein_id=WP_011880715.1;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 5561 7372 . - . ID=gene-LDO50_RS28830;Name=LDO50_RS28830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28830;old_locus_tag=BVI1335_840005 NZ_CAJZAO010000365.1 Protein Homology CDS 5561 7372 . - 0 ID=cds-WP_224020470.1;Parent=gene-LDO50_RS28830;Dbxref=GenBank:WP_224020470.1;Name=WP_224020470.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723932.1;locus_tag=LDO50_RS28830;product=ATP-binding response regulator;protein_id=WP_224020470.1;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 7753 7837 . - . ID=gene-LDO50_RS28835;Name=LDO50_RS28835;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS28835;old_locus_tag=BVI1335_TRNA36 NZ_CAJZAO010000365.1 tRNAscan-SE tRNA 7753 7837 . - . ID=rna-LDO50_RS28835;Parent=gene-LDO50_RS28835;anticodon=(pos:complement(7801..7803));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS28835;product=tRNA-Leu NZ_CAJZAO010000365.1 tRNAscan-SE exon 7753 7837 . - . ID=exon-LDO50_RS28835-1;Parent=rna-LDO50_RS28835;anticodon=(pos:complement(7801..7803));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS28835;product=tRNA-Leu NZ_CAJZAO010000365.1 RefSeq gene 7985 9310 . + . ID=gene-LDO50_RS28840;Name=LDO50_RS28840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28840;old_locus_tag=BVI1335_840006 NZ_CAJZAO010000365.1 Protein Homology CDS 7985 9310 . + 0 ID=cds-WP_011880713.1;Parent=gene-LDO50_RS28840;Dbxref=GenBank:WP_011880713.1;Name=WP_011880713.1;Ontology_term=GO:0006468,GO:0005515,GO:0005524;gbkey=CDS;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880713.1;locus_tag=LDO50_RS28840;product=leucine-rich repeat-containing protein kinase family protein;protein_id=WP_011880713.1;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 9349 9978 . - . ID=gene-LDO50_RS28845;Name=LDO50_RS28845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28845;old_locus_tag=BVI1335_840007 NZ_CAJZAO010000365.1 Protein Homology CDS 9349 9978 . - 0 ID=cds-WP_034195469.1;Parent=gene-LDO50_RS28845;Dbxref=GenBank:WP_034195469.1;Name=WP_034195469.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498820.1;locus_tag=LDO50_RS28845;product=LysE family translocator;protein_id=WP_034195469.1;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 10065 10241 . - . ID=gene-LDO50_RS28850;Name=LDO50_RS28850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28850;old_locus_tag=BVI1335_840008 NZ_CAJZAO010000365.1 Protein Homology CDS 10065 10241 . - 0 ID=cds-WP_011880711.1;Parent=gene-LDO50_RS28850;Dbxref=GenBank:WP_011880711.1;Name=WP_011880711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880711.1;locus_tag=LDO50_RS28850;product=hypothetical protein;protein_id=WP_011880711.1;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 10271 10717 . - . ID=gene-LDO50_RS28855;Name=LDO50_RS28855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28855;old_locus_tag=BVI1335_840009 NZ_CAJZAO010000365.1 Protein Homology CDS 10271 10717 . - 0 ID=cds-WP_034195539.1;Parent=gene-LDO50_RS28855;Dbxref=GenBank:WP_034195539.1;Name=WP_034195539.1;Ontology_term=GO:0016531;gbkey=CDS;go_function=copper chaperone activity|0016531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366652.1;locus_tag=LDO50_RS28855;product=copper chaperone PCu(A)C;protein_id=WP_034195539.1;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 10770 11135 . - . ID=gene-LDO50_RS28860;Name=copC;gbkey=Gene;gene=copC;gene_biotype=protein_coding;locus_tag=LDO50_RS28860 NZ_CAJZAO010000365.1 Protein Homology CDS 10770 11135 . - 0 ID=cds-WP_011880709.1;Parent=gene-LDO50_RS28860;Dbxref=GenBank:WP_011880709.1;Name=WP_011880709.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507,GO:0042597;gbkey=CDS;gene=copC;go_component=periplasmic space|0042597||IEA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354302.1;locus_tag=LDO50_RS28860;product=copper homeostasis periplasmic binding protein CopC;protein_id=WP_011880709.1;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 11353 11730 . - . ID=gene-LDO50_RS28865;Name=LDO50_RS28865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28865;old_locus_tag=BVI1335_840011 NZ_CAJZAO010000365.1 Protein Homology CDS 11353 11730 . - 0 ID=cds-WP_011880708.1;Parent=gene-LDO50_RS28865;Dbxref=GenBank:WP_011880708.1;Name=WP_011880708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659386.1;locus_tag=LDO50_RS28865;product=DUF2946 domain-containing protein;protein_id=WP_011880708.1;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 11825 12127 . - . ID=gene-LDO50_RS28870;Name=LDO50_RS28870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28870;old_locus_tag=BVI1335_840012 NZ_CAJZAO010000365.1 Protein Homology CDS 11825 12127 . - 0 ID=cds-WP_034195467.1;Parent=gene-LDO50_RS28870;Dbxref=GenBank:WP_034195467.1;Name=WP_034195467.1;Ontology_term=GO:0009055,GO:0051537;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486753.1;locus_tag=LDO50_RS28870;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_034195467.1;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 12227 14125 . - . ID=gene-LDO50_RS28875;Name=LDO50_RS28875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28875;old_locus_tag=BVI1335_840013 NZ_CAJZAO010000365.1 Protein Homology CDS 12227 14125 . - 0 ID=cds-WP_059474685.1;Parent=gene-LDO50_RS28875;Dbxref=GenBank:WP_059474685.1;Name=WP_059474685.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749465.1;locus_tag=LDO50_RS28875;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_059474685.1;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 14350 14625 . + . ID=gene-LDO50_RS31015;Name=LDO50_RS31015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31015;old_locus_tag=BVI1335_840014 NZ_CAJZAO010000365.1 Protein Homology CDS 14350 14625 . + 0 ID=cds-WP_226184110.1;Parent=gene-LDO50_RS31015;Dbxref=GenBank:WP_226184110.1;Name=WP_226184110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396459.1;locus_tag=LDO50_RS31015;product=DUF2964 family protein;protein_id=WP_226184110.1;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 14868 15155 . + . ID=gene-LDO50_RS28885;Name=LDO50_RS28885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28885;old_locus_tag=BVI1335_840015 NZ_CAJZAO010000365.1 Protein Homology CDS 14868 15155 . + 0 ID=cds-WP_011880704.1;Parent=gene-LDO50_RS28885;Dbxref=GenBank:WP_011880704.1;Name=WP_011880704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027738.1;locus_tag=LDO50_RS28885;product=DUF1488 domain-containing protein;protein_id=WP_011880704.1;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 15291 16154 . - . ID=gene-LDO50_RS28890;Name=LDO50_RS28890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28890;old_locus_tag=BVI1335_840016 NZ_CAJZAO010000365.1 Protein Homology CDS 15291 16154 . - 0 ID=cds-WP_014723921.1;Parent=gene-LDO50_RS28890;Dbxref=GenBank:WP_014723921.1;Name=WP_014723921.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880703.1;locus_tag=LDO50_RS28890;product=MBL fold metallo-hydrolase;protein_id=WP_014723921.1;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 16157 16483 . - . ID=gene-LDO50_RS28895;Name=LDO50_RS28895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28895;old_locus_tag=BVI1335_840017 NZ_CAJZAO010000365.1 Protein Homology CDS 16157 16483 . - 0 ID=cds-WP_011880702.1;Parent=gene-LDO50_RS28895;Dbxref=GenBank:WP_011880702.1;Name=WP_011880702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659379.1;locus_tag=LDO50_RS28895;product=hypothetical protein;protein_id=WP_011880702.1;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 16496 17035 . - . ID=gene-LDO50_RS28900;Name=LDO50_RS28900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28900;old_locus_tag=BVI1335_840018 NZ_CAJZAO010000365.1 Protein Homology CDS 16496 17035 . - 0 ID=cds-WP_014723920.1;Parent=gene-LDO50_RS28900;Dbxref=GenBank:WP_014723920.1;Name=WP_014723920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880701.1;locus_tag=LDO50_RS28900;product=hypothetical protein;protein_id=WP_014723920.1;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 17226 18077 . + . ID=gene-LDO50_RS28905;Name=LDO50_RS28905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28905;old_locus_tag=BVI1335_840019 NZ_CAJZAO010000365.1 Protein Homology CDS 17226 18077 . + 0 ID=cds-WP_014723919.1;Parent=gene-LDO50_RS28905;Dbxref=GenBank:WP_014723919.1;Name=WP_014723919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366643.1;locus_tag=LDO50_RS28905;product=LysR substrate-binding domain-containing protein;protein_id=WP_014723919.1;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 18169 19470 . - . ID=gene-LDO50_RS28910;Name=LDO50_RS28910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28910;old_locus_tag=BVI1335_840020 NZ_CAJZAO010000365.1 Protein Homology CDS 18169 19470 . - 0 ID=cds-WP_011880699.1;Parent=gene-LDO50_RS28910;Dbxref=GenBank:WP_011880699.1;Name=WP_011880699.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009897941.1;locus_tag=LDO50_RS28910;product=NCS2 family permease;protein_id=WP_011880699.1;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 20161 20439 . + . ID=gene-LDO50_RS28915;Name=LDO50_RS28915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28915;old_locus_tag=BVI1335_840022 NZ_CAJZAO010000365.1 Protein Homology CDS 20161 20439 . + 0 ID=cds-WP_011880698.1;Parent=gene-LDO50_RS28915;Dbxref=GenBank:WP_011880698.1;Name=WP_011880698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880698.1;locus_tag=LDO50_RS28915;product=hypothetical protein;protein_id=WP_011880698.1;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 20603 20977 . - . ID=gene-LDO50_RS28920;Name=LDO50_RS28920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28920;old_locus_tag=BVI1335_840023 NZ_CAJZAO010000365.1 Protein Homology CDS 20603 20977 . - 0 ID=cds-WP_045578394.1;Parent=gene-LDO50_RS28920;Dbxref=GenBank:WP_045578394.1;Name=WP_045578394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723916.1;locus_tag=LDO50_RS28920;product=DUF2917 domain-containing protein;protein_id=WP_045578394.1;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 21228 21515 . - . ID=gene-LDO50_RS28925;Name=LDO50_RS28925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28925;old_locus_tag=BVI1335_840024 NZ_CAJZAO010000365.1 Protein Homology CDS 21228 21515 . - 0 ID=cds-WP_011880696.1;Parent=gene-LDO50_RS28925;Dbxref=GenBank:WP_011880696.1;Name=WP_011880696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396466.1;locus_tag=LDO50_RS28925;product=hypothetical protein;protein_id=WP_011880696.1;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 22020 23297 . + . ID=gene-LDO50_RS28930;Name=LDO50_RS28930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28930;old_locus_tag=BVI1335_840025 NZ_CAJZAO010000365.1 Protein Homology CDS 22020 23297 . + 0 ID=cds-WP_059889031.1;Parent=gene-LDO50_RS28930;Dbxref=GenBank:WP_059889031.1;Name=WP_059889031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659370.1;locus_tag=LDO50_RS28930;product=haloacid dehalogenase-like hydrolase;protein_id=WP_059889031.1;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 23358 24131 . - . ID=gene-LDO50_RS28935;Name=LDO50_RS28935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28935;old_locus_tag=BVI1335_840026 NZ_CAJZAO010000365.1 Protein Homology CDS 23358 24131 . - 0 ID=cds-WP_059460578.1;Parent=gene-LDO50_RS28935;Dbxref=GenBank:WP_059460578.1;Name=WP_059460578.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483242.1;locus_tag=LDO50_RS28935;product=slipin family protein;protein_id=WP_059460578.1;transl_table=11 NZ_CAJZAO010000365.1 RefSeq gene 24128 24278 . - . ID=gene-LDO50_RS31180;Name=LDO50_RS31180;end_range=24278,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS31180;partial=true NZ_CAJZAO010000365.1 Protein Homology CDS 24128 24278 . - 1 ID=cds-WP_372586124.1;Parent=gene-LDO50_RS31180;Dbxref=GenBank:WP_372586124.1;Name=WP_372586124.1;end_range=24278,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493499.1;locus_tag=LDO50_RS31180;partial=true;product=NfeD family protein;protein_id=WP_372586124.1;transl_table=11 ##sequence-region NZ_CAJZAO010000366.1 1 27470 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000366.1 RefSeq region 1 27470 . + . ID=NZ_CAJZAO010000366.1:1..27470;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_85 NZ_CAJZAO010000366.1 RefSeq gene 1 5924 . + . ID=gene-LDO50_RS28945;Name=LDO50_RS28945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28945;old_locus_tag=BVI1335_850001;partial=true;start_range=.,1 NZ_CAJZAO010000366.1 Protein Homology CDS 1 5924 . + 2 ID=cds-WP_372586125.1;Parent=gene-LDO50_RS28945;Dbxref=GenBank:WP_372586125.1;Name=WP_372586125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725946.1;locus_tag=LDO50_RS28945;partial=true;product=amino acid adenylation domain-containing protein;protein_id=WP_372586125.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000366.1 RefSeq gene 5935 7551 . + . ID=gene-LDO50_RS28950;Name=LDO50_RS28950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28950;old_locus_tag=BVI1335_850002 NZ_CAJZAO010000366.1 Protein Homology CDS 5935 7551 . + 0 ID=cds-WP_224020473.1;Parent=gene-LDO50_RS28950;Dbxref=GenBank:WP_224020473.1;Name=WP_224020473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332179.1;locus_tag=LDO50_RS28950;product=MBL fold metallo-hydrolase;protein_id=WP_224020473.1;transl_table=11 NZ_CAJZAO010000366.1 RefSeq gene 7539 11468 . + . ID=gene-LDO50_RS28955;Name=LDO50_RS28955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28955;old_locus_tag=BVI1335_850003 NZ_CAJZAO010000366.1 Protein Homology CDS 7539 11468 . + 0 ID=cds-WP_224020474.1;Parent=gene-LDO50_RS28955;Dbxref=GenBank:WP_224020474.1;Name=WP_224020474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332180.1;locus_tag=LDO50_RS28955;product=non-ribosomal peptide synthetase;protein_id=WP_224020474.1;transl_table=11 NZ_CAJZAO010000366.1 RefSeq gene 11465 20569 . + . ID=gene-LDO50_RS28960;Name=LDO50_RS28960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28960;old_locus_tag=BVI1335_850004 NZ_CAJZAO010000366.1 Protein Homology CDS 11465 20569 . + 0 ID=cds-WP_224020475.1;Parent=gene-LDO50_RS28960;Dbxref=GenBank:WP_224020475.1;Name=WP_224020475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753160.1;locus_tag=LDO50_RS28960;product=non-ribosomal peptide synthetase;protein_id=WP_224020475.1;transl_table=11 NZ_CAJZAO010000366.1 RefSeq gene 20657 27470 . + . ID=gene-LDO50_RS28965;Name=LDO50_RS28965;end_range=27470,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28965;partial=true NZ_CAJZAO010000366.1 Protein Homology CDS 20657 27470 . + 0 ID=cds-WP_224020476.1;Parent=gene-LDO50_RS28965;Dbxref=GenBank:WP_224020476.1;Name=WP_224020476.1;end_range=27470,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725950.1;locus_tag=LDO50_RS28965;partial=true;product=non-ribosomal peptide synthetase;protein_id=WP_224020476.1;transl_table=11 ##sequence-region NZ_CAJZAO010000367.1 1 4564 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000367.1 RefSeq region 1 4564 . + . ID=NZ_CAJZAO010000367.1:1..4564;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_86 NZ_CAJZAO010000367.1 RefSeq gene 467 1900 . + . ID=gene-LDO50_RS28970;Name=LDO50_RS28970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28970;old_locus_tag=BVI1335_860002 NZ_CAJZAO010000367.1 Protein Homology CDS 467 1900 . + 0 ID=cds-WP_059702101.1;Parent=gene-LDO50_RS28970;Dbxref=GenBank:WP_059702101.1;Name=WP_059702101.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217887.1;locus_tag=LDO50_RS28970;product=RNA polymerase factor sigma-54;protein_id=WP_059702101.1;transl_table=11 NZ_CAJZAO010000367.1 RefSeq gene 1971 2159 . + . ID=gene-LDO50_RS28975;Name=LDO50_RS28975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28975;old_locus_tag=BVI1335_860003 NZ_CAJZAO010000367.1 Protein Homology CDS 1971 2159 . + 0 ID=cds-WP_011879877.1;Parent=gene-LDO50_RS28975;Dbxref=GenBank:WP_011879877.1;Name=WP_011879877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009978806.1;locus_tag=LDO50_RS28975;product=DUF3008 family protein;protein_id=WP_011879877.1;transl_table=11 NZ_CAJZAO010000367.1 RefSeq gene 2204 2365 . + . ID=gene-LDO50_RS28980;Name=LDO50_RS28980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28980;old_locus_tag=BVI1335_860004 NZ_CAJZAO010000367.1 Protein Homology CDS 2204 2365 . + 0 ID=cds-WP_006498332.1;Parent=gene-LDO50_RS28980;Dbxref=GenBank:WP_006498332.1;Name=WP_006498332.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010120894.1;locus_tag=LDO50_RS28980;product=DUF1328 family protein;protein_id=WP_006498332.1;transl_table=11 NZ_CAJZAO010000367.1 RefSeq gene 2362 2748 . + . ID=gene-LDO50_RS28985;Name=LDO50_RS28985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28985;old_locus_tag=BVI1335_860005 NZ_CAJZAO010000367.1 Protein Homology CDS 2362 2748 . + 0 ID=cds-WP_014725695.1;Parent=gene-LDO50_RS28985;Dbxref=GenBank:WP_014725695.1;Name=WP_014725695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761661.1;locus_tag=LDO50_RS28985;product=DUF3022 domain-containing protein;protein_id=WP_014725695.1;transl_table=11 NZ_CAJZAO010000367.1 RefSeq gene 2921 4564 . + . ID=gene-LDO50_RS28990;Name=LDO50_RS28990;end_range=4564,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28990;partial=true NZ_CAJZAO010000367.1 Protein Homology CDS 2921 4564 . + 0 ID=cds-WP_224020477.1;Parent=gene-LDO50_RS28990;Dbxref=GenBank:WP_224020477.1;Name=WP_224020477.1;Ontology_term=GO:0004096,GO:0020037;end_range=4564,.;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725696.1;locus_tag=LDO50_RS28990;partial=true;product=catalase;protein_id=WP_224020477.1;transl_table=11 ##sequence-region NZ_CAJZAO010000368.1 1 29651 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000368.1 RefSeq region 1 29651 . + . ID=NZ_CAJZAO010000368.1:1..29651;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_87 NZ_CAJZAO010000368.1 RefSeq gene 1 129 . + . ID=gene-LDO50_RS28995;Name=LDO50_RS28995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS28995;old_locus_tag=BVI1335_870001;partial=true;start_range=.,1 NZ_CAJZAO010000368.1 Protein Homology CDS 1 129 . + 0 ID=cds-WP_224020481.1;Parent=gene-LDO50_RS28995;Dbxref=GenBank:WP_224020481.1;Name=WP_224020481.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481008.1;locus_tag=LDO50_RS28995;partial=true;product=DUF1656 domain-containing protein;protein_id=WP_224020481.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000368.1 RefSeq gene 132 1070 . + . ID=gene-LDO50_RS29000;Name=LDO50_RS29000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29000;old_locus_tag=BVI1335_870002 NZ_CAJZAO010000368.1 Protein Homology CDS 132 1070 . + 0 ID=cds-WP_059453399.1;Parent=gene-LDO50_RS29000;Dbxref=GenBank:WP_059453399.1;Name=WP_059453399.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337147.1;locus_tag=LDO50_RS29000;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_059453399.1;transl_table=11 NZ_CAJZAO010000368.1 RefSeq gene 1067 2641 . + . ID=gene-LDO50_RS29005;Name=LDO50_RS29005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29005;old_locus_tag=BVI1335_870003 NZ_CAJZAO010000368.1 Protein Homology CDS 1067 2641 . + 0 ID=cds-WP_224020478.1;Parent=gene-LDO50_RS29005;Dbxref=GenBank:WP_224020478.1;Name=WP_224020478.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660896.1;locus_tag=LDO50_RS29005;product=efflux transporter outer membrane subunit;protein_id=WP_224020478.1;transl_table=11 NZ_CAJZAO010000368.1 RefSeq gene 2882 3307 . + . ID=gene-LDO50_RS29010;Name=LDO50_RS29010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29010;old_locus_tag=BVI1335_870005 NZ_CAJZAO010000368.1 Protein Homology CDS 2882 3307 . + 0 ID=cds-WP_059453401.1;Parent=gene-LDO50_RS29010;Dbxref=GenBank:WP_059453401.1;Name=WP_059453401.1;Ontology_term=GO:0015689;gbkey=CDS;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879630.1;locus_tag=LDO50_RS29010;product=TOBE domain-containing protein;protein_id=WP_059453401.1;transl_table=11 NZ_CAJZAO010000368.1 RefSeq gene 3592 4653 . - . ID=gene-LDO50_RS29015;Name=LDO50_RS29015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29015;old_locus_tag=BVI1335_870007 NZ_CAJZAO010000368.1 Protein Homology CDS 3592 4653 . - 0 ID=cds-WP_059453402.1;Parent=gene-LDO50_RS29015;Dbxref=GenBank:WP_059453402.1;Name=WP_059453402.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489069.1;locus_tag=LDO50_RS29015;product=DMT family transporter;protein_id=WP_059453402.1;transl_table=11 NZ_CAJZAO010000368.1 RefSeq gene 5482 6150 . - . ID=gene-LDO50_RS29020;Name=LDO50_RS29020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29020;old_locus_tag=BVI1335_870010 NZ_CAJZAO010000368.1 Protein Homology CDS 5482 6150 . - 0 ID=cds-WP_176295785.1;Parent=gene-LDO50_RS29020;Dbxref=GenBank:WP_176295785.1;Name=WP_176295785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489074.1;locus_tag=LDO50_RS29020;product=ProQ/FinO family protein;protein_id=WP_176295785.1;transl_table=11 NZ_CAJZAO010000368.1 RefSeq gene 6958 7449 . - . ID=gene-LDO50_RS29025;Name=LDO50_RS29025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29025;old_locus_tag=BVI1335_870011 NZ_CAJZAO010000368.1 Protein Homology CDS 6958 7449 . - 0 ID=cds-WP_059581335.1;Parent=gene-LDO50_RS29025;Dbxref=GenBank:WP_059581335.1;Name=WP_059581335.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335397.1;locus_tag=LDO50_RS29025;product=flavodoxin family protein;protein_id=WP_059581335.1;transl_table=11 NZ_CAJZAO010000368.1 RefSeq gene 7577 8230 . - . ID=gene-LDO50_RS29030;Name=LDO50_RS29030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29030;old_locus_tag=BVI1335_870012 NZ_CAJZAO010000368.1 Protein Homology CDS 7577 8230 . - 0 ID=cds-WP_224020479.1;Parent=gene-LDO50_RS29030;Dbxref=GenBank:WP_224020479.1;Name=WP_224020479.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879637.1;locus_tag=LDO50_RS29030;product=TetR/AcrR family transcriptional regulator;protein_id=WP_224020479.1;transl_table=11 NZ_CAJZAO010000368.1 RefSeq gene 8315 9439 . + . ID=gene-LDO50_RS29035;Name=LDO50_RS29035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29035;old_locus_tag=BVI1335_870013 NZ_CAJZAO010000368.1 Protein Homology CDS 8315 9439 . + 0 ID=cds-WP_059581340.1;Parent=gene-LDO50_RS29035;Dbxref=GenBank:WP_059581340.1;Name=WP_059581340.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497841.1;locus_tag=LDO50_RS29035;product=MBL fold metallo-hydrolase;protein_id=WP_059581340.1;transl_table=11 NZ_CAJZAO010000368.1 RefSeq gene 10967 11662 . + . ID=gene-LDO50_RS29045;Name=LDO50_RS29045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29045;old_locus_tag=BVI1335_870015 NZ_CAJZAO010000368.1 Protein Homology CDS 10967 11662 . + 0 ID=cds-WP_059581343.1;Parent=gene-LDO50_RS29045;Dbxref=GenBank:WP_059581343.1;Name=WP_059581343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399349.1;locus_tag=LDO50_RS29045;product=ParA family protein;protein_id=WP_059581343.1;transl_table=11 NZ_CAJZAO010000368.1 RefSeq gene 11655 12686 . + . ID=gene-LDO50_RS29050;Name=LDO50_RS29050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29050;old_locus_tag=BVI1335_870016 NZ_CAJZAO010000368.1 Protein Homology CDS 11655 12686 . + 0 ID=cds-WP_059453408.1;Parent=gene-LDO50_RS29050;Dbxref=GenBank:WP_059453408.1;Name=WP_059453408.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660886.1;locus_tag=LDO50_RS29050;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_059453408.1;transl_table=11 NZ_CAJZAO010000368.1 RefSeq gene 12777 14093 . - . ID=gene-LDO50_RS29055;Name=LDO50_RS29055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29055;old_locus_tag=BVI1335_870017 NZ_CAJZAO010000368.1 Protein Homology CDS 12777 14093 . - 0 ID=cds-WP_059453409.1;Parent=gene-LDO50_RS29055;Dbxref=GenBank:WP_059453409.1;Name=WP_059453409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753023.1;locus_tag=LDO50_RS29055;product=replication initiation protein;protein_id=WP_059453409.1;transl_table=11 NZ_CAJZAO010000368.1 RefSeq gene 16442 16768 . + . ID=gene-LDO50_RS29060;Name=LDO50_RS29060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29060;old_locus_tag=BVI1335_870021 NZ_CAJZAO010000368.1 Protein Homology CDS 16442 16768 . + 0 ID=cds-WP_011879644.1;Parent=gene-LDO50_RS29060;Dbxref=GenBank:WP_011879644.1;Name=WP_011879644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759642.1;locus_tag=LDO50_RS29060;product=hypothetical protein;protein_id=WP_011879644.1;transl_table=11 NZ_CAJZAO010000368.1 RefSeq gene 16984 17889 . - . ID=gene-LDO50_RS29065;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=LDO50_RS29065;old_locus_tag=BVI1335_870022 NZ_CAJZAO010000368.1 Protein Homology CDS 16984 17889 . - 0 ID=cds-WP_059549090.1;Parent=gene-LDO50_RS29065;Dbxref=GenBank:WP_059549090.1;Name=WP_059549090.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=gcvA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725506.1;locus_tag=LDO50_RS29065;product=transcriptional regulator GcvA;protein_id=WP_059549090.1;transl_table=11 NZ_CAJZAO010000368.1 RefSeq gene 18029 19324 . + . ID=gene-LDO50_RS29070;Name=LDO50_RS29070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29070;old_locus_tag=BVI1335_870023 NZ_CAJZAO010000368.1 Protein Homology CDS 18029 19324 . + 0 ID=cds-WP_059549089.1;Parent=gene-LDO50_RS29070;Dbxref=GenBank:WP_059549089.1;Name=WP_059549089.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879646.1;locus_tag=LDO50_RS29070;product=adenylosuccinate synthase;protein_id=WP_059549089.1;transl_table=11 NZ_CAJZAO010000368.1 RefSeq gene 19566 20507 . + . ID=gene-LDO50_RS29075;Name=LDO50_RS29075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29075;old_locus_tag=BVI1335_870024 NZ_CAJZAO010000368.1 Protein Homology CDS 19566 20507 . + 0 ID=cds-WP_014725508.1;Parent=gene-LDO50_RS29075;Dbxref=GenBank:WP_014725508.1;Name=WP_014725508.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660882.1;locus_tag=LDO50_RS29075;product=LysR family transcriptional regulator;protein_id=WP_014725508.1;transl_table=11 NZ_CAJZAO010000368.1 RefSeq gene 20818 21525 . - . ID=gene-LDO50_RS29080;Name=LDO50_RS29080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29080;old_locus_tag=BVI1335_870025 NZ_CAJZAO010000368.1 Protein Homology CDS 20818 21525 . - 0 ID=cds-WP_041494334.1;Parent=gene-LDO50_RS29080;Dbxref=GenBank:WP_041494334.1;Name=WP_041494334.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879648.1;locus_tag=LDO50_RS29080;product=dienelactone hydrolase family protein;protein_id=WP_041494334.1;transl_table=11 NZ_CAJZAO010000368.1 RefSeq gene 21788 22099 . - . ID=gene-LDO50_RS29085;Name=LDO50_RS29085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29085;old_locus_tag=BVI1335_870026 NZ_CAJZAO010000368.1 Protein Homology CDS 21788 22099 . - 0 ID=cds-WP_059549088.1;Parent=gene-LDO50_RS29085;Dbxref=GenBank:WP_059549088.1;Name=WP_059549088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337171.1;locus_tag=LDO50_RS29085;product=DUF4148 domain-containing protein;protein_id=WP_059549088.1;transl_table=11 NZ_CAJZAO010000368.1 RefSeq gene 22973 23428 . + . ID=gene-LDO50_RS29090;Name=parS;gbkey=Gene;gene=parS;gene_biotype=protein_coding;locus_tag=LDO50_RS29090;old_locus_tag=BVI1335_870028 NZ_CAJZAO010000368.1 Protein Homology CDS 22973 23428 . + 0 ID=cds-WP_011879650.1;Parent=gene-LDO50_RS29090;Dbxref=GenBank:WP_011879650.1;Name=WP_011879650.1;Ontology_term=GO:0110001;gbkey=CDS;gene=parS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767020.1;locus_tag=LDO50_RS29090;product=type II RES/Xre toxin-antitoxin system antitoxin;protein_id=WP_011879650.1;transl_table=11 NZ_CAJZAO010000368.1 RefSeq gene 23425 23904 . + . ID=gene-LDO50_RS29095;Name=LDO50_RS29095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29095;old_locus_tag=BVI1335_870029 NZ_CAJZAO010000368.1 Protein Homology CDS 23425 23904 . + 0 ID=cds-WP_011879651.1;Parent=gene-LDO50_RS29095;Dbxref=GenBank:WP_011879651.1;Name=WP_011879651.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372112.1;locus_tag=LDO50_RS29095;product=RES family NAD+ phosphorylase;protein_id=WP_011879651.1;transl_table=11 NZ_CAJZAO010000368.1 RefSeq gene 23939 24877 . - . ID=gene-LDO50_RS29100;Name=LDO50_RS29100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29100;old_locus_tag=BVI1335_870030 NZ_CAJZAO010000368.1 Protein Homology CDS 23939 24877 . - 0 ID=cds-WP_059549087.1;Parent=gene-LDO50_RS29100;Dbxref=GenBank:WP_059549087.1;Name=WP_059549087.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217786.1;locus_tag=LDO50_RS29100;product=tyrosine-type recombinase/integrase;protein_id=WP_059549087.1;transl_table=11 NZ_CAJZAO010000368.1 RefSeq gene 25306 25839 . + . ID=gene-LDO50_RS29105;Name=LDO50_RS29105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29105;old_locus_tag=BVI1335_870031 NZ_CAJZAO010000368.1 Protein Homology CDS 25306 25839 . + 0 ID=cds-WP_059549086.1;Parent=gene-LDO50_RS29105;Dbxref=GenBank:WP_059549086.1;Name=WP_059549086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549383.1;locus_tag=LDO50_RS29105;product=hypothetical protein;protein_id=WP_059549086.1;transl_table=11 NZ_CAJZAO010000368.1 RefSeq gene 26515 27765 . + . ID=gene-LDO50_RS29110;Name=LDO50_RS29110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29110;old_locus_tag=BVI1335_870032 NZ_CAJZAO010000368.1 Protein Homology CDS 26515 27765 . + 0 ID=cds-WP_059549085.1;Parent=gene-LDO50_RS29110;Dbxref=GenBank:WP_059549085.1;Name=WP_059549085.1;Ontology_term=GO:0003677,GO:0042578,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405536.1;locus_tag=LDO50_RS29110;product=metallophosphoesterase family protein;protein_id=WP_059549085.1;transl_table=11 NZ_CAJZAO010000368.1 RefSeq gene 27769 29651 . + . ID=gene-LDO50_RS29115;Name=LDO50_RS29115;end_range=29651,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29115;partial=true NZ_CAJZAO010000368.1 Protein Homology CDS 27769 29651 . + 0 ID=cds-WP_224020480.1;Parent=gene-LDO50_RS29115;Dbxref=GenBank:WP_224020480.1;Name=WP_224020480.1;end_range=29651,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217789.1;locus_tag=LDO50_RS29115;partial=true;product=YhaN family protein;protein_id=WP_224020480.1;transl_table=11 ##sequence-region NZ_CAJZAO010000369.1 1 13905 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000369.1 RefSeq region 1 13905 . + . ID=NZ_CAJZAO010000369.1:1..13905;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_88 NZ_CAJZAO010000369.1 RefSeq gene 1 149 . + . ID=gene-LDO50_RS29120;Name=LDO50_RS29120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29120;old_locus_tag=BVI1335_880001;partial=true;start_range=.,1 NZ_CAJZAO010000369.1 Protein Homology CDS 1 149 . + 2 ID=cds-WP_224020483.1;Parent=gene-LDO50_RS29120;Dbxref=GenBank:WP_224020483.1;Name=WP_224020483.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362792.1;locus_tag=LDO50_RS29120;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_224020483.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000369.1 RefSeq gene 281 1408 . - . ID=gene-LDO50_RS29125;Name=LDO50_RS29125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29125;old_locus_tag=BVI1335_880002 NZ_CAJZAO010000369.1 Protein Homology CDS 281 1408 . - 0 ID=cds-WP_059621849.1;Parent=gene-LDO50_RS29125;Dbxref=GenBank:WP_059621849.1;Name=WP_059621849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722198.1;locus_tag=LDO50_RS29125;product=hypothetical protein;protein_id=WP_059621849.1;transl_table=11 NZ_CAJZAO010000369.1 RefSeq gene 1405 3108 . - . ID=gene-LDO50_RS29130;Name=LDO50_RS29130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29130;old_locus_tag=BVI1335_880003 NZ_CAJZAO010000369.1 Protein Homology CDS 1405 3108 . - 0 ID=cds-WP_059621851.1;Parent=gene-LDO50_RS29130;Dbxref=GenBank:WP_059621851.1;Name=WP_059621851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600702.1;locus_tag=LDO50_RS29130;product=thiamine pyrophosphate-binding protein;protein_id=WP_059621851.1;transl_table=11 NZ_CAJZAO010000369.1 RefSeq gene 3387 3623 . + . ID=gene-LDO50_RS29135;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=LDO50_RS29135;old_locus_tag=BVI1335_880004 NZ_CAJZAO010000369.1 Protein Homology CDS 3387 3623 . + 0 ID=cds-WP_011882846.1;Parent=gene-LDO50_RS29135;Dbxref=GenBank:WP_011882846.1;Name=WP_011882846.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759705.1;locus_tag=LDO50_RS29135;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_011882846.1;transl_table=11 NZ_CAJZAO010000369.1 RefSeq gene 3623 4024 . + . ID=gene-LDO50_RS29140;Name=LDO50_RS29140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29140;old_locus_tag=BVI1335_880005 NZ_CAJZAO010000369.1 Protein Homology CDS 3623 4024 . + 0 ID=cds-WP_059621853.1;Parent=gene-LDO50_RS29140;Dbxref=GenBank:WP_059621853.1;Name=WP_059621853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754107.1;locus_tag=LDO50_RS29140;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_059621853.1;transl_table=11 NZ_CAJZAO010000369.1 RefSeq gene 4092 5480 . - . ID=gene-LDO50_RS29145;Name=LDO50_RS29145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29145;old_locus_tag=BVI1335_880006 NZ_CAJZAO010000369.1 Protein Homology CDS 4092 5480 . - 0 ID=cds-WP_014722202.1;Parent=gene-LDO50_RS29145;Dbxref=GenBank:WP_014722202.1;Name=WP_014722202.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015004074.1;locus_tag=LDO50_RS29145;product=L-serine ammonia-lyase;protein_id=WP_014722202.1;transl_table=11 NZ_CAJZAO010000369.1 RefSeq gene 5511 6647 . - . ID=gene-LDO50_RS29150;Name=LDO50_RS29150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29150;old_locus_tag=BVI1335_880007 NZ_CAJZAO010000369.1 Protein Homology CDS 5511 6647 . - 0 ID=cds-WP_045578623.1;Parent=gene-LDO50_RS29150;Dbxref=GenBank:WP_045578623.1;Name=WP_045578623.1;Ontology_term=GO:0016829,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004545290.1;locus_tag=LDO50_RS29150;product=alginate lyase family protein;protein_id=WP_045578623.1;transl_table=11 NZ_CAJZAO010000369.1 RefSeq gene 6799 9726 . - . ID=gene-LDO50_RS29155;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=LDO50_RS29155;old_locus_tag=BVI1335_880008 NZ_CAJZAO010000369.1 Protein Homology CDS 6799 9726 . - 0 ID=cds-WP_014722203.1;Parent=gene-LDO50_RS29155;Dbxref=GenBank:WP_014722203.1;Name=WP_014722203.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754104.1;locus_tag=LDO50_RS29155;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_014722203.1;transl_table=11 NZ_CAJZAO010000369.1 RefSeq gene 9787 10167 . - . ID=gene-LDO50_RS29160;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=LDO50_RS29160;old_locus_tag=BVI1335_880009 NZ_CAJZAO010000369.1 Protein Homology CDS 9787 10167 . - 0 ID=cds-WP_011882851.1;Parent=gene-LDO50_RS29160;Dbxref=GenBank:WP_011882851.1;Name=WP_011882851.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759700.1;locus_tag=LDO50_RS29160;product=glycine cleavage system protein GcvH;protein_id=WP_011882851.1;transl_table=11 NZ_CAJZAO010000369.1 RefSeq gene 10291 11409 . - . ID=gene-LDO50_RS29165;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=LDO50_RS29165;old_locus_tag=BVI1335_880010 NZ_CAJZAO010000369.1 Protein Homology CDS 10291 11409 . - 0 ID=cds-WP_059463002.1;Parent=gene-LDO50_RS29165;Dbxref=GenBank:WP_059463002.1;Name=WP_059463002.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010093063.1;locus_tag=LDO50_RS29165;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_059463002.1;transl_table=11 NZ_CAJZAO010000369.1 cmsearch riboswitch 11495 11627 . - . ID=id-NZ_CAJZAO010000369.1:11495..11627;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAO010000369.1 cmsearch riboswitch 11661 11763 . - . ID=id-NZ_CAJZAO010000369.1:11661..11763;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAO010000369.1 RefSeq gene 11875 12243 . - . ID=gene-LDO50_RS29170;Name=LDO50_RS29170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29170;old_locus_tag=BVI1335_880011 NZ_CAJZAO010000369.1 Protein Homology CDS 11875 12243 . - 0 ID=cds-WP_224020482.1;Parent=gene-LDO50_RS29170;Dbxref=GenBank:WP_224020482.1;Name=WP_224020482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195883.1;locus_tag=LDO50_RS29170;product=hypothetical protein;protein_id=WP_224020482.1;transl_table=11 NZ_CAJZAO010000369.1 RefSeq gene 12462 13514 . - . ID=gene-LDO50_RS29175;Name=LDO50_RS29175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29175;old_locus_tag=BVI1335_880012 NZ_CAJZAO010000369.1 Protein Homology CDS 12462 13514 . - 0 ID=cds-WP_011882854.1;Parent=gene-LDO50_RS29175;Dbxref=GenBank:WP_011882854.1;Name=WP_011882854.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401418.1;locus_tag=LDO50_RS29175;product=oxidoreductase;protein_id=WP_011882854.1;transl_table=11 ##sequence-region NZ_CAJZAO010000370.1 1 11639 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000370.1 RefSeq region 1 11639 . + . ID=NZ_CAJZAO010000370.1:1..11639;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_89 NZ_CAJZAO010000370.1 RefSeq pseudogene 1 107 . - . ID=gene-LDO50_RS29180;Name=LDO50_RS29180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS29180;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAO010000370.1 Protein Homology CDS 1 107 . - 0 ID=cds-LDO50_RS29180;Parent=gene-LDO50_RS29180;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009898046.1;locus_tag=LDO50_RS29180;partial=true;product=electron transfer flavoprotein subunit beta/FixA family protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAO010000370.1 RefSeq gene 104 343 . - . ID=gene-LDO50_RS32115;Name=LDO50_RS32115;end_range=343,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS32115;old_locus_tag=BVI1335_890002;partial=true NZ_CAJZAO010000370.1 Protein Homology CDS 104 343 . - 0 ID=cds-WP_443797882.1;Parent=gene-LDO50_RS32115;Dbxref=GenBank:WP_443797882.1;Name=WP_443797882.1;end_range=343,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012968.6;locus_tag=LDO50_RS32115;partial=true;product=FAD-binding protein;protein_id=WP_443797882.1;transl_table=11 NZ_CAJZAO010000370.1 RefSeq pseudogene 354 880 . - . ID=gene-LDO50_RS32120;Name=LDO50_RS32120;end_range=880,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS32120;old_locus_tag=BVI1335_890003;partial=true;pseudo=true;start_range=.,354 NZ_CAJZAO010000370.1 Protein Homology CDS 354 880 . - 1 ID=cds-LDO50_RS32120;Parent=gene-LDO50_RS32120;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=880,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011300931.1;locus_tag=LDO50_RS32120;partial=true;product=electron transfer flavoprotein subunit alpha/FixB family protein;pseudo=true;start_range=.,354;transl_table=11 NZ_CAJZAO010000370.1 RefSeq pseudogene 891 1318 . - . ID=gene-LDO50_RS32125;Name=LDO50_RS32125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS32125;old_locus_tag=BVI1335_890004;partial=true;pseudo=true;start_range=.,891 NZ_CAJZAO010000370.1 Protein Homology CDS 891 1318 . - 0 ID=cds-LDO50_RS32125;Parent=gene-LDO50_RS32125;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013200.6;locus_tag=LDO50_RS32125;partial=true;product=electron transfer flavoprotein subunit alpha/FixB family protein;pseudo=true;start_range=.,891;transl_table=11 NZ_CAJZAO010000370.1 RefSeq gene 1323 3248 . - . ID=gene-LDO50_RS29190;Name=LDO50_RS29190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29190;old_locus_tag=BVI1335_890005 NZ_CAJZAO010000370.1 Protein Homology CDS 1323 3248 . - 0 ID=cds-WP_059734136.1;Parent=gene-LDO50_RS29190;Dbxref=GenBank:WP_059734136.1;Name=WP_059734136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018315306.1;locus_tag=LDO50_RS29190;product=(Fe-S)-binding protein;protein_id=WP_059734136.1;transl_table=11 NZ_CAJZAO010000370.1 RefSeq gene 3251 5314 . - . ID=gene-LDO50_RS29195;Name=LDO50_RS29195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29195;old_locus_tag=BVI1335_890006 NZ_CAJZAO010000370.1 Protein Homology CDS 3251 5314 . - 0 ID=cds-WP_059474657.1;Parent=gene-LDO50_RS29195;Dbxref=GenBank:WP_059474657.1;Name=WP_059474657.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186960.1;locus_tag=LDO50_RS29195;product=NADH:flavin oxidoreductase;protein_id=WP_059474657.1;transl_table=11 NZ_CAJZAO010000370.1 RefSeq gene 5386 5919 . - . ID=gene-LDO50_RS29200;Name=LDO50_RS29200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29200;old_locus_tag=BVI1335_890007 NZ_CAJZAO010000370.1 Protein Homology CDS 5386 5919 . - 0 ID=cds-WP_011880774.1;Parent=gene-LDO50_RS29200;Dbxref=GenBank:WP_011880774.1;Name=WP_011880774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089911.1;locus_tag=LDO50_RS29200;product=DUF5943 domain-containing protein;protein_id=WP_011880774.1;transl_table=11 NZ_CAJZAO010000370.1 RefSeq gene 6068 7039 . - . ID=gene-LDO50_RS29205;Name=LDO50_RS29205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29205;old_locus_tag=BVI1335_890008 NZ_CAJZAO010000370.1 Protein Homology CDS 6068 7039 . - 0 ID=cds-WP_011880775.1;Parent=gene-LDO50_RS29205;Dbxref=GenBank:WP_011880775.1;Name=WP_011880775.1;Ontology_term=GO:0006508,GO:0046872,GO:0070573;gbkey=CDS;go_function=metal ion binding|0046872||IEA,metallodipeptidase activity|0070573||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017773741.1;locus_tag=LDO50_RS29205;product=dipeptidase;protein_id=WP_011880775.1;transl_table=11 NZ_CAJZAO010000370.1 RefSeq gene 7082 8356 . - . ID=gene-LDO50_RS29210;Name=LDO50_RS29210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29210;old_locus_tag=BVI1335_890009 NZ_CAJZAO010000370.1 Protein Homology CDS 7082 8356 . - 0 ID=cds-WP_014723975.1;Parent=gene-LDO50_RS29210;Dbxref=GenBank:WP_014723975.1;Name=WP_014723975.1;Ontology_term=GO:0019264,GO:0004372,GO:0030170;gbkey=CDS;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603909.1;locus_tag=LDO50_RS29210;product=serine hydroxymethyltransferase;protein_id=WP_014723975.1;transl_table=11 NZ_CAJZAO010000370.1 RefSeq gene 8366 8785 . + . ID=gene-LDO50_RS29215;Name=LDO50_RS29215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29215 NZ_CAJZAO010000370.1 GeneMarkS-2+ CDS 8366 8785 . + 0 ID=cds-WP_014723976.1;Parent=gene-LDO50_RS29215;Dbxref=GenBank:WP_014723976.1;Name=WP_014723976.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS29215;product=hypothetical protein;protein_id=WP_014723976.1;transl_table=11 NZ_CAJZAO010000370.1 RefSeq gene 8806 9834 . + . ID=gene-LDO50_RS29220;Name=LDO50_RS29220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29220;old_locus_tag=BVI1335_890010 NZ_CAJZAO010000370.1 Protein Homology CDS 8806 9834 . + 0 ID=cds-WP_011880777.1;Parent=gene-LDO50_RS29220;Dbxref=GenBank:WP_011880777.1;Name=WP_011880777.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017328620.1;locus_tag=LDO50_RS29220;product=GlxA family transcriptional regulator;protein_id=WP_011880777.1;transl_table=11 NZ_CAJZAO010000370.1 cmsearch riboswitch 11019 11207 . - . ID=id-NZ_CAJZAO010000370.1:11019..11207;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAO010000370.1 RefSeq pseudogene 11399 11639 . + . ID=gene-LDO50_RS29230;Name=LDO50_RS29230;end_range=11639,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS29230;partial=true;pseudo=true NZ_CAJZAO010000370.1 Protein Homology CDS 11399 11639 . + 0 ID=cds-LDO50_RS29230;Parent=gene-LDO50_RS29230;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=11639,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213336.1;locus_tag=LDO50_RS29230;partial=true;product=bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000371.1 1 45955 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000371.1 RefSeq region 1 45955 . + . ID=NZ_CAJZAO010000371.1:1..45955;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_9 NZ_CAJZAO010000371.1 RefSeq gene 63 1622 . - . ID=gene-LDO50_RS29235;Name=LDO50_RS29235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29235;old_locus_tag=BVI1335_90001 NZ_CAJZAO010000371.1 Protein Homology CDS 63 1622 . - 0 ID=cds-WP_041494308.1;Parent=gene-LDO50_RS29235;Dbxref=GenBank:WP_041494308.1;Name=WP_041494308.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882465.1;locus_tag=LDO50_RS29235;product=methyl-accepting chemotaxis protein;protein_id=WP_041494308.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 1856 3370 . + . ID=gene-LDO50_RS29240;Name=LDO50_RS29240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29240;old_locus_tag=BVI1335_90002 NZ_CAJZAO010000371.1 Protein Homology CDS 1856 3370 . + 0 ID=cds-WP_059463115.1;Parent=gene-LDO50_RS29240;Dbxref=GenBank:WP_059463115.1;Name=WP_059463115.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882466.1;locus_tag=LDO50_RS29240;product=MDR family MFS transporter;protein_id=WP_059463115.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 3694 4692 . - . ID=gene-LDO50_RS29245;Name=LDO50_RS29245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29245;old_locus_tag=BVI1335_90003 NZ_CAJZAO010000371.1 Protein Homology CDS 3694 4692 . - 0 ID=cds-WP_011882467.1;Parent=gene-LDO50_RS29245;Dbxref=GenBank:WP_011882467.1;Name=WP_011882467.1;Ontology_term=GO:0003960,GO:0070402;gbkey=CDS;go_function=quinone reductase (NADPH) activity|0003960||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753092.1;locus_tag=LDO50_RS29245;product=quinone oxidoreductase family protein;protein_id=WP_011882467.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 4818 5981 . + . ID=gene-LDO50_RS29250;Name=LDO50_RS29250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29250;old_locus_tag=BVI1335_90004 NZ_CAJZAO010000371.1 Protein Homology CDS 4818 5981 . + 0 ID=cds-WP_224020484.1;Parent=gene-LDO50_RS29250;Dbxref=GenBank:WP_224020484.1;Name=WP_224020484.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882468.1;locus_tag=LDO50_RS29250;product=LysR family transcriptional regulator;protein_id=WP_224020484.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 6078 6638 . + . ID=gene-LDO50_RS29255;Name=LDO50_RS29255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29255;old_locus_tag=BVI1335_90005 NZ_CAJZAO010000371.1 Protein Homology CDS 6078 6638 . + 0 ID=cds-WP_224020485.1;Parent=gene-LDO50_RS29255;Dbxref=GenBank:WP_224020485.1;Name=WP_224020485.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396819.1;locus_tag=LDO50_RS29255;product=GNAT family N-acetyltransferase;protein_id=WP_224020485.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 6648 7514 . + . ID=gene-LDO50_RS29260;Name=LDO50_RS29260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29260;old_locus_tag=BVI1335_90006 NZ_CAJZAO010000371.1 Protein Homology CDS 6648 7514 . + 0 ID=cds-WP_175949081.1;Parent=gene-LDO50_RS29260;Dbxref=GenBank:WP_175949081.1;Name=WP_175949081.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659057.1;locus_tag=LDO50_RS29260;product=MerR family transcriptional regulator;protein_id=WP_175949081.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 7638 8618 . + . ID=gene-LDO50_RS29265;Name=LDO50_RS29265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29265;old_locus_tag=BVI1335_90007 NZ_CAJZAO010000371.1 Protein Homology CDS 7638 8618 . + 0 ID=cds-WP_014725249.1;Parent=gene-LDO50_RS29265;Dbxref=GenBank:WP_014725249.1;Name=WP_014725249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853072.1;locus_tag=LDO50_RS29265;product=sulfonate ABC transporter substrate-binding protein;protein_id=WP_014725249.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 8811 9773 . - . ID=gene-LDO50_RS29270;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=LDO50_RS29270;old_locus_tag=BVI1335_90008 NZ_CAJZAO010000371.1 Protein Homology CDS 8811 9773 . - 0 ID=cds-WP_011882472.1;Parent=gene-LDO50_RS29270;Dbxref=GenBank:WP_011882472.1;Name=WP_011882472.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525503.1;locus_tag=LDO50_RS29270;product=agmatinase;protein_id=WP_011882472.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 10122 10793 . + . ID=gene-LDO50_RS29275;Name=LDO50_RS29275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29275;old_locus_tag=BVI1335_90009 NZ_CAJZAO010000371.1 Protein Homology CDS 10122 10793 . + 0 ID=cds-WP_011882473.1;Parent=gene-LDO50_RS29275;Dbxref=GenBank:WP_011882473.1;Name=WP_011882473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366283.1;locus_tag=LDO50_RS29275;product=lysoplasmalogenase;protein_id=WP_011882473.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 11043 12644 . + . ID=gene-LDO50_RS29280;Name=LDO50_RS29280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29280;old_locus_tag=BVI1335_90010 NZ_CAJZAO010000371.1 Protein Homology CDS 11043 12644 . + 0 ID=cds-WP_059696331.1;Parent=gene-LDO50_RS29280;Dbxref=GenBank:WP_059696331.1;Name=WP_059696331.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216832.1;locus_tag=LDO50_RS29280;product=flavin-containing monooxygenase;protein_id=WP_059696331.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 12666 13604 . + . ID=gene-LDO50_RS29285;Name=LDO50_RS29285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29285;old_locus_tag=BVI1335_90012 NZ_CAJZAO010000371.1 Protein Homology CDS 12666 13604 . + 0 ID=cds-WP_034195221.1;Parent=gene-LDO50_RS29285;Dbxref=GenBank:WP_034195221.1;Name=WP_034195221.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882475.1;locus_tag=LDO50_RS29285;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_034195221.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 13601 14506 . + . ID=gene-LDO50_RS29290;Name=LDO50_RS29290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29290;old_locus_tag=BVI1335_90011 NZ_CAJZAO010000371.1 Protein Homology CDS 13601 14506 . + 0 ID=cds-WP_175658268.1;Parent=gene-LDO50_RS29290;Dbxref=GenBank:WP_175658268.1;Name=WP_175658268.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329071.1;locus_tag=LDO50_RS29290;product=metal-dependent hydrolase;protein_id=WP_175658268.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 14511 15374 . + . ID=gene-LDO50_RS29295;Name=LDO50_RS29295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29295;old_locus_tag=BVI1335_90013 NZ_CAJZAO010000371.1 Protein Homology CDS 14511 15374 . + 0 ID=cds-WP_224020486.1;Parent=gene-LDO50_RS29295;Dbxref=GenBank:WP_224020486.1;Name=WP_224020486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759159.1;locus_tag=LDO50_RS29295;product=alpha/beta fold hydrolase;protein_id=WP_224020486.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 15550 15862 . + . ID=gene-LDO50_RS32130;Name=LDO50_RS32130;end_range=15862,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS32130;old_locus_tag=BVI1335_90014;partial=true NZ_CAJZAO010000371.1 Protein Homology CDS 15550 15862 . + 0 ID=cds-WP_443797883.1;Parent=gene-LDO50_RS32130;Dbxref=GenBank:WP_443797883.1;Name=WP_443797883.1;Ontology_term=GO:0071918,GO:0015204,GO:0016020;end_range=15862,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=urea transmembrane transporter activity|0015204||IEA;go_process=urea transmembrane transport|0071918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403238.1;locus_tag=LDO50_RS32130;partial=true;product=urea transporter;protein_id=WP_443797883.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq pseudogene 15873 16119 . + . ID=gene-LDO50_RS32135;Name=LDO50_RS32135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS32135;old_locus_tag=BVI1335_90015;partial=true;pseudo=true;start_range=.,15873 NZ_CAJZAO010000371.1 Protein Homology CDS 15873 16119 . + 1 ID=cds-LDO50_RS32135;Parent=gene-LDO50_RS32135;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403238.1;locus_tag=LDO50_RS32135;partial=true;product=urea transporter;pseudo=true;start_range=.,15873;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 16131 16253 . + . ID=gene-LDO50_RS30935;Name=LDO50_RS30935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30935 NZ_CAJZAO010000371.1 GeneMarkS-2+ CDS 16131 16253 . + 0 ID=cds-WP_258569974.1;Parent=gene-LDO50_RS30935;Dbxref=GenBank:WP_258569974.1;Name=WP_258569974.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS30935;product=hypothetical protein;protein_id=WP_258569974.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 16425 21266 . + . ID=gene-LDO50_RS29305;Name=LDO50_RS29305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29305;old_locus_tag=BVI1335_90017 NZ_CAJZAO010000371.1 Protein Homology CDS 16425 21266 . + 0 ID=cds-WP_224020487.1;Parent=gene-LDO50_RS29305;Dbxref=GenBank:WP_224020487.1;Name=WP_224020487.1;Ontology_term=GO:0004352;gbkey=CDS;go_function=glutamate dehydrogenase (NAD+) activity|0004352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487209.1;locus_tag=LDO50_RS29305;product=NAD-glutamate dehydrogenase;protein_id=WP_224020487.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 21288 22145 . - . ID=gene-LDO50_RS29310;Name=LDO50_RS29310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29310;old_locus_tag=BVI1335_90018 NZ_CAJZAO010000371.1 Protein Homology CDS 21288 22145 . - 0 ID=cds-WP_059622728.1;Parent=gene-LDO50_RS29310;Dbxref=GenBank:WP_059622728.1;Name=WP_059622728.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882479.1;locus_tag=LDO50_RS29310;product=class I SAM-dependent methyltransferase;protein_id=WP_059622728.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 22142 22303 . - . ID=gene-LDO50_RS29315;Name=LDO50_RS29315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29315;old_locus_tag=BVI1335_90019 NZ_CAJZAO010000371.1 GeneMarkS-2+ CDS 22142 22303 . - 0 ID=cds-WP_166677067.1;Parent=gene-LDO50_RS29315;Dbxref=GenBank:WP_166677067.1;Name=WP_166677067.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS29315;product=hypothetical protein;protein_id=WP_166677067.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 22305 22448 . - . ID=gene-LDO50_RS29320;Name=LDO50_RS29320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29320;old_locus_tag=BVI1335_90020 NZ_CAJZAO010000371.1 Protein Homology CDS 22305 22448 . - 0 ID=cds-WP_166677068.1;Parent=gene-LDO50_RS29320;Dbxref=GenBank:WP_166677068.1;Name=WP_166677068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882481.1;locus_tag=LDO50_RS29320;product=hypothetical protein;protein_id=WP_166677068.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 22551 23384 . - . ID=gene-LDO50_RS29325;Name=LDO50_RS29325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29325;old_locus_tag=BVI1335_90021 NZ_CAJZAO010000371.1 Protein Homology CDS 22551 23384 . - 0 ID=cds-WP_014725258.1;Parent=gene-LDO50_RS29325;Dbxref=GenBank:WP_014725258.1;Name=WP_014725258.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882482.1;locus_tag=LDO50_RS29325;product=arylamine N-acetyltransferase family protein;protein_id=WP_014725258.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 23485 24177 . - . ID=gene-LDO50_RS29330;Name=LDO50_RS29330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29330;old_locus_tag=BVI1335_90022 NZ_CAJZAO010000371.1 Protein Homology CDS 23485 24177 . - 0 ID=cds-WP_011882483.1;Parent=gene-LDO50_RS29330;Dbxref=GenBank:WP_011882483.1;Name=WP_011882483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216821.1;locus_tag=LDO50_RS29330;product=hypothetical protein;protein_id=WP_011882483.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 24456 25937 . - . ID=gene-LDO50_RS29335;Name=LDO50_RS29335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29335;old_locus_tag=BVI1335_90023 NZ_CAJZAO010000371.1 Protein Homology CDS 24456 25937 . - 0 ID=cds-WP_059622724.1;Parent=gene-LDO50_RS29335;Dbxref=GenBank:WP_059622724.1;Name=WP_059622724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396798.1;locus_tag=LDO50_RS29335;product=amidase;protein_id=WP_059622724.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 26315 26773 . - . ID=gene-LDO50_RS29340;Name=LDO50_RS29340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29340;old_locus_tag=BVI1335_90024 NZ_CAJZAO010000371.1 Protein Homology CDS 26315 26773 . - 0 ID=cds-WP_034195228.1;Parent=gene-LDO50_RS29340;Dbxref=GenBank:WP_034195228.1;Name=WP_034195228.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882485.1;locus_tag=LDO50_RS29340;product=pseudoazurin;protein_id=WP_034195228.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 26831 29056 . - . ID=gene-LDO50_RS29345;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=LDO50_RS29345;old_locus_tag=BVI1335_90025 NZ_CAJZAO010000371.1 Protein Homology CDS 26831 29056 . - 0 ID=cds-WP_069224675.1;Parent=gene-LDO50_RS29345;Dbxref=GenBank:WP_069224675.1;Name=WP_069224675.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725263.1;locus_tag=LDO50_RS29345;product=catalase/peroxidase HPI;protein_id=WP_069224675.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 29878 30312 . + . ID=gene-LDO50_RS29350;Name=LDO50_RS29350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29350;old_locus_tag=BVI1335_90027 NZ_CAJZAO010000371.1 Protein Homology CDS 29878 30312 . + 0 ID=cds-WP_014725264.1;Parent=gene-LDO50_RS29350;Dbxref=GenBank:WP_014725264.1;Name=WP_014725264.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758080.1;locus_tag=LDO50_RS29350;product=universal stress protein;protein_id=WP_014725264.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 30949 31197 . + . ID=gene-LDO50_RS29355;Name=LDO50_RS29355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29355;old_locus_tag=BVI1335_90028 NZ_CAJZAO010000371.1 Protein Homology CDS 30949 31197 . + 0 ID=cds-WP_011882490.1;Parent=gene-LDO50_RS29355;Dbxref=GenBank:WP_011882490.1;Name=WP_011882490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216816.1;locus_tag=LDO50_RS29355;product=hypothetical protein;protein_id=WP_011882490.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 31609 32895 . + . ID=gene-LDO50_RS29360;Name=LDO50_RS29360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29360;old_locus_tag=BVI1335_90029 NZ_CAJZAO010000371.1 Protein Homology CDS 31609 32895 . + 0 ID=cds-WP_014725267.1;Parent=gene-LDO50_RS29360;Dbxref=GenBank:WP_014725267.1;Name=WP_014725267.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481465.1;locus_tag=LDO50_RS29360;product=Nramp family divalent metal transporter;protein_id=WP_014725267.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 32990 34225 . + . ID=gene-LDO50_RS29365;Name=LDO50_RS29365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29365;old_locus_tag=BVI1335_90030 NZ_CAJZAO010000371.1 Protein Homology CDS 32990 34225 . + 0 ID=cds-WP_014725268.1;Parent=gene-LDO50_RS29365;Dbxref=GenBank:WP_014725268.1;Name=WP_014725268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725268.1;locus_tag=LDO50_RS29365;product=DUF2252 family protein;protein_id=WP_014725268.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 34379 34780 . - . ID=gene-LDO50_RS29370;Name=LDO50_RS29370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29370;old_locus_tag=BVI1335_90031 NZ_CAJZAO010000371.1 Protein Homology CDS 34379 34780 . - 0 ID=cds-WP_011882493.1;Parent=gene-LDO50_RS29370;Dbxref=GenBank:WP_011882493.1;Name=WP_011882493.1;Ontology_term=GO:0003680;gbkey=CDS;go_function=minor groove of adenine-thymine-rich DNA binding|0003680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659083.1;locus_tag=LDO50_RS29370;product=PPC domain-containing DNA-binding protein;protein_id=WP_011882493.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 34876 35898 . - . ID=gene-LDO50_RS29375;Name=LDO50_RS29375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29375;old_locus_tag=BVI1335_90032 NZ_CAJZAO010000371.1 Protein Homology CDS 34876 35898 . - 0 ID=cds-WP_045577868.1;Parent=gene-LDO50_RS29375;Dbxref=GenBank:WP_045577868.1;Name=WP_045577868.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898941.1;locus_tag=LDO50_RS29375;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_045577868.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 35912 37579 . - . ID=gene-LDO50_RS29380;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=LDO50_RS29380;old_locus_tag=BVI1335_90033 NZ_CAJZAO010000371.1 Protein Homology CDS 35912 37579 . - 0 ID=cds-WP_059463101.1;Parent=gene-LDO50_RS29380;Dbxref=GenBank:WP_059463101.1;Name=WP_059463101.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659085.1;locus_tag=LDO50_RS29380;product=hydroxylamine reductase;protein_id=WP_059463101.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 37765 37992 . - . ID=gene-LDO50_RS29385;Name=LDO50_RS29385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29385;old_locus_tag=BVI1335_90035 NZ_CAJZAO010000371.1 Protein Homology CDS 37765 37992 . - 0 ID=cds-WP_011882496.1;Parent=gene-LDO50_RS29385;Dbxref=GenBank:WP_011882496.1;Name=WP_011882496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882496.1;locus_tag=LDO50_RS29385;product=DUF3079 domain-containing protein;protein_id=WP_011882496.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 38165 38593 . - . ID=gene-LDO50_RS29390;Name=LDO50_RS29390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29390 NZ_CAJZAO010000371.1 Protein Homology CDS 38165 38593 . - 0 ID=cds-WP_224020488.1;Parent=gene-LDO50_RS29390;Dbxref=GenBank:WP_224020488.1;Name=WP_224020488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882497.1;locus_tag=LDO50_RS29390;product=YbaB/EbfC family DNA-binding protein;protein_id=WP_224020488.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 38701 40248 . - . ID=gene-LDO50_RS29395;Name=LDO50_RS29395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29395;old_locus_tag=BVI1335_90036 NZ_CAJZAO010000371.1 Protein Homology CDS 38701 40248 . - 0 ID=cds-WP_372586126.1;Parent=gene-LDO50_RS29395;Dbxref=GenBank:WP_372586126.1;Name=WP_372586126.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354704.1;locus_tag=LDO50_RS29395;product=Do family serine endopeptidase;protein_id=WP_372586126.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 40296 40640 . - . ID=gene-LDO50_RS29400;Name=LDO50_RS29400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29400;old_locus_tag=BVI1335_90037 NZ_CAJZAO010000371.1 Protein Homology CDS 40296 40640 . - 0 ID=cds-WP_224020496.1;Parent=gene-LDO50_RS29400;Dbxref=GenBank:WP_224020496.1;Name=WP_224020496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725273.1;locus_tag=LDO50_RS29400;product=hypothetical protein;protein_id=WP_224020496.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 40708 41658 . - . ID=gene-LDO50_RS29405;Name=LDO50_RS29405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29405;old_locus_tag=BVI1335_90038 NZ_CAJZAO010000371.1 Protein Homology CDS 40708 41658 . - 0 ID=cds-WP_224020490.1;Parent=gene-LDO50_RS29405;Dbxref=GenBank:WP_224020490.1;Name=WP_224020490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882500.1;locus_tag=LDO50_RS29405;product=hypothetical protein;protein_id=WP_224020490.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 41665 42555 . - . ID=gene-LDO50_RS29410;Name=LDO50_RS29410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29410;old_locus_tag=BVI1335_90039 NZ_CAJZAO010000371.1 Protein Homology CDS 41665 42555 . - 0 ID=cds-WP_043292468.1;Parent=gene-LDO50_RS29410;Dbxref=GenBank:WP_043292468.1;Name=WP_043292468.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600706.1;locus_tag=LDO50_RS29410;product=peptidylprolyl isomerase;protein_id=WP_043292468.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 42643 43062 . - . ID=gene-LDO50_RS29415;Name=LDO50_RS29415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29415;old_locus_tag=BVI1335_90040 NZ_CAJZAO010000371.1 Protein Homology CDS 42643 43062 . - 0 ID=cds-WP_224020492.1;Parent=gene-LDO50_RS29415;Dbxref=GenBank:WP_224020492.1;Name=WP_224020492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882502.1;locus_tag=LDO50_RS29415;product=hypothetical protein;protein_id=WP_224020492.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 43080 43655 . - . ID=gene-LDO50_RS29420;Name=LDO50_RS29420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29420;old_locus_tag=BVI1335_90041 NZ_CAJZAO010000371.1 Protein Homology CDS 43080 43655 . - 0 ID=cds-WP_011882503.1;Parent=gene-LDO50_RS29420;Dbxref=GenBank:WP_011882503.1;Name=WP_011882503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725277.1;locus_tag=LDO50_RS29420;product=YbjN domain-containing protein;protein_id=WP_011882503.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 43712 44419 . - . ID=gene-LDO50_RS29425;Name=LDO50_RS29425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29425;old_locus_tag=BVI1335_90042 NZ_CAJZAO010000371.1 Protein Homology CDS 43712 44419 . - 0 ID=cds-WP_224020493.1;Parent=gene-LDO50_RS29425;Dbxref=GenBank:WP_224020493.1;Name=WP_224020493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600591.1;locus_tag=LDO50_RS29425;product=hypothetical protein;protein_id=WP_224020493.1;transl_table=11 NZ_CAJZAO010000371.1 RefSeq gene 44432 45955 . - . ID=gene-LDO50_RS29430;Name=LDO50_RS29430;end_range=45955,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29430;old_locus_tag=BVI1335_90044;partial=true NZ_CAJZAO010000371.1 Protein Homology CDS 44432 45955 . - 0 ID=cds-WP_224020494.1;Parent=gene-LDO50_RS29430;Dbxref=GenBank:WP_224020494.1;Name=WP_224020494.1;end_range=45955,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882505.1;locus_tag=LDO50_RS29430;partial=true;product=putative porin;protein_id=WP_224020494.1;transl_table=11 ##sequence-region NZ_CAJZAO010000372.1 1 13490 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000372.1 RefSeq region 1 13490 . + . ID=NZ_CAJZAO010000372.1:1..13490;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_90 NZ_CAJZAO010000372.1 RefSeq gene 143 409 . - . ID=gene-LDO50_RS29435;Name=LDO50_RS29435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29435;old_locus_tag=BVI1335_900002 NZ_CAJZAO010000372.1 Protein Homology CDS 143 409 . - 0 ID=cds-WP_043292321.1;Parent=gene-LDO50_RS29435;Dbxref=GenBank:WP_043292321.1;Name=WP_043292321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396526.1;locus_tag=LDO50_RS29435;product=YodC family protein;protein_id=WP_043292321.1;transl_table=11 NZ_CAJZAO010000372.1 RefSeq gene 746 1606 . - . ID=gene-LDO50_RS29440;Name=LDO50_RS29440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29440;old_locus_tag=BVI1335_900003 NZ_CAJZAO010000372.1 Protein Homology CDS 746 1606 . - 0 ID=cds-WP_200092024.1;Parent=gene-LDO50_RS29440;Dbxref=GenBank:WP_200092024.1;Name=WP_200092024.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498871.1;locus_tag=LDO50_RS29440;product=isocitrate lyase/PEP mutase family protein;protein_id=WP_200092024.1;transl_table=11 NZ_CAJZAO010000372.1 RefSeq gene 1872 2732 . - . ID=gene-LDO50_RS29445;Name=LDO50_RS29445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29445;old_locus_tag=BVI1335_900004 NZ_CAJZAO010000372.1 Protein Homology CDS 1872 2732 . - 0 ID=cds-WP_046422981.1;Parent=gene-LDO50_RS29445;Dbxref=GenBank:WP_046422981.1;Name=WP_046422981.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010108400.1;locus_tag=LDO50_RS29445;product=MurR/RpiR family transcriptional regulator;protein_id=WP_046422981.1;transl_table=11 NZ_CAJZAO010000372.1 RefSeq gene 2788 3141 . - . ID=gene-LDO50_RS29450;Name=LDO50_RS29450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29450;old_locus_tag=BVI1335_900006 NZ_CAJZAO010000372.1 Protein Homology CDS 2788 3141 . - 0 ID=cds-WP_014725486.1;Parent=gene-LDO50_RS29450;Dbxref=GenBank:WP_014725486.1;Name=WP_014725486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753955.1;locus_tag=LDO50_RS29450;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_014725486.1;transl_table=11 NZ_CAJZAO010000372.1 RefSeq gene 3352 4014 . + . ID=gene-LDO50_RS29455;Name=LDO50_RS29455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29455;old_locus_tag=BVI1335_900005 NZ_CAJZAO010000372.1 Protein Homology CDS 3352 4014 . + 0 ID=cds-WP_011882710.1;Parent=gene-LDO50_RS29455;Dbxref=GenBank:WP_011882710.1;Name=WP_011882710.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194706.1;locus_tag=LDO50_RS29455;product=response regulator;protein_id=WP_011882710.1;transl_table=11 NZ_CAJZAO010000372.1 RefSeq gene 4011 5387 . + . ID=gene-LDO50_RS29460;Name=LDO50_RS29460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29460;old_locus_tag=BVI1335_900007 NZ_CAJZAO010000372.1 Protein Homology CDS 4011 5387 . + 0 ID=cds-WP_059474696.1;Parent=gene-LDO50_RS29460;Dbxref=GenBank:WP_059474696.1;Name=WP_059474696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410593.1;locus_tag=LDO50_RS29460;product=ATP-binding protein;protein_id=WP_059474696.1;transl_table=11 NZ_CAJZAO010000372.1 RefSeq gene 6288 6488 . + . ID=gene-LDO50_RS29465;Name=LDO50_RS29465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29465;old_locus_tag=BVI1335_900009 NZ_CAJZAO010000372.1 Protein Homology CDS 6288 6488 . + 0 ID=cds-WP_011882712.1;Parent=gene-LDO50_RS29465;Dbxref=GenBank:WP_011882712.1;Name=WP_011882712.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882712.1;locus_tag=LDO50_RS29465;product=DUF805 domain-containing protein;protein_id=WP_011882712.1;transl_table=11 NZ_CAJZAO010000372.1 RefSeq gene 6961 7854 . - . ID=gene-LDO50_RS29470;Name=LDO50_RS29470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29470;old_locus_tag=BVI1335_900012 NZ_CAJZAO010000372.1 Protein Homology CDS 6961 7854 . - 0 ID=cds-WP_011882713.1;Parent=gene-LDO50_RS29470;Dbxref=GenBank:WP_011882713.1;Name=WP_011882713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659342.1;locus_tag=LDO50_RS29470;product=PEN-E family class A beta-lactamase;protein_id=WP_011882713.1;transl_table=11 NZ_CAJZAO010000372.1 RefSeq gene 7971 8861 . + . ID=gene-LDO50_RS29475;Name=penR;gbkey=Gene;gene=penR;gene_biotype=protein_coding;locus_tag=LDO50_RS29475;old_locus_tag=BVI1335_900013 NZ_CAJZAO010000372.1 Protein Homology CDS 7971 8861 . + 0 ID=cds-WP_011882714.1;Parent=gene-LDO50_RS29475;Dbxref=GenBank:WP_011882714.1;Name=WP_011882714.1;gbkey=CDS;gene=penR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758175.1;locus_tag=LDO50_RS29475;product=beta-lactamase transcriptional regulator PenR;protein_id=WP_011882714.1;transl_table=11 NZ_CAJZAO010000372.1 RefSeq gene 9369 9623 . - . ID=gene-LDO50_RS29480;Name=LDO50_RS29480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29480;old_locus_tag=BVI1335_900014 NZ_CAJZAO010000372.1 Protein Homology CDS 9369 9623 . - 0 ID=cds-WP_011880668.1;Parent=gene-LDO50_RS29480;Dbxref=GenBank:WP_011880668.1;Name=WP_011880668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354368.1;locus_tag=LDO50_RS29480;product=hypothetical protein;protein_id=WP_011880668.1;transl_table=11 NZ_CAJZAO010000372.1 RefSeq gene 9722 11947 . - . ID=gene-LDO50_RS29485;Name=LDO50_RS29485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29485;old_locus_tag=BVI1335_900015 NZ_CAJZAO010000372.1 Protein Homology CDS 9722 11947 . - 0 ID=cds-WP_011880669.1;Parent=gene-LDO50_RS29485;Dbxref=GenBank:WP_011880669.1;Name=WP_011880669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898673.1;locus_tag=LDO50_RS29485;product=amylo-alpha-1%2C6-glucosidase;protein_id=WP_011880669.1;transl_table=11 NZ_CAJZAO010000372.1 RefSeq gene 12095 13129 . - . ID=gene-LDO50_RS29490;Name=LDO50_RS29490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29490;old_locus_tag=BVI1335_900016 NZ_CAJZAO010000372.1 Protein Homology CDS 12095 13129 . - 0 ID=cds-WP_011880670.1;Parent=gene-LDO50_RS29490;Dbxref=GenBank:WP_011880670.1;Name=WP_011880670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366613.1;locus_tag=LDO50_RS29490;product=rod shape-determining protein;protein_id=WP_011880670.1;transl_table=11 ##sequence-region NZ_CAJZAO010000373.1 1 18773 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000373.1 RefSeq region 1 18773 . + . ID=NZ_CAJZAO010000373.1:1..18773;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_91 NZ_CAJZAO010000373.1 RefSeq gene 386 1246 . + . ID=gene-LDO50_RS29495;Name=LDO50_RS29495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29495;old_locus_tag=BVI1335_910001 NZ_CAJZAO010000373.1 Protein Homology CDS 386 1246 . + 0 ID=cds-WP_045579531.1;Parent=gene-LDO50_RS29495;Dbxref=GenBank:WP_045579531.1;Name=WP_045579531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753459.1;locus_tag=LDO50_RS29495;product=transporter substrate-binding domain-containing protein;protein_id=WP_045579531.1;transl_table=11 NZ_CAJZAO010000373.1 RefSeq gene 1339 2061 . + . ID=gene-LDO50_RS29500;Name=LDO50_RS29500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29500;old_locus_tag=BVI1335_910002 NZ_CAJZAO010000373.1 Protein Homology CDS 1339 2061 . + 0 ID=cds-WP_011879718.1;Parent=gene-LDO50_RS29500;Dbxref=GenBank:WP_011879718.1;Name=WP_011879718.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481063.1;locus_tag=LDO50_RS29500;product=ABC transporter permease;protein_id=WP_011879718.1;transl_table=11 NZ_CAJZAO010000373.1 RefSeq gene 2074 2820 . + . ID=gene-LDO50_RS29505;Name=LDO50_RS29505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29505;old_locus_tag=BVI1335_910003 NZ_CAJZAO010000373.1 Protein Homology CDS 2074 2820 . + 0 ID=cds-WP_046423229.1;Parent=gene-LDO50_RS29505;Dbxref=GenBank:WP_046423229.1;Name=WP_046423229.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337093.1;locus_tag=LDO50_RS29505;product=ABC transporter permease;protein_id=WP_046423229.1;transl_table=11 NZ_CAJZAO010000373.1 RefSeq gene 2848 3639 . + . ID=gene-LDO50_RS29510;Name=LDO50_RS29510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29510;old_locus_tag=BVI1335_910004 NZ_CAJZAO010000373.1 Protein Homology CDS 2848 3639 . + 0 ID=cds-WP_011879720.1;Parent=gene-LDO50_RS29510;Dbxref=GenBank:WP_011879720.1;Name=WP_011879720.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013592029.1;locus_tag=LDO50_RS29510;product=ABC transporter ATP-binding protein;protein_id=WP_011879720.1;transl_table=11 NZ_CAJZAO010000373.1 RefSeq gene 3647 5140 . + . ID=gene-LDO50_RS29515;Name=LDO50_RS29515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29515;old_locus_tag=BVI1335_910005 NZ_CAJZAO010000373.1 Protein Homology CDS 3647 5140 . + 0 ID=cds-WP_059494753.1;Parent=gene-LDO50_RS29515;Dbxref=GenBank:WP_059494753.1;Name=WP_059494753.1;Ontology_term=GO:0009072,GO:0016841;gbkey=CDS;go_function=ammonia-lyase activity|0016841||IEA;go_process=aromatic amino acid metabolic process|0009072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481066.1;locus_tag=LDO50_RS29515;product=aromatic amino acid ammonia-lyase;protein_id=WP_059494753.1;transl_table=11 NZ_CAJZAO010000373.1 RefSeq gene 5185 5940 . + . ID=gene-LDO50_RS29520;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=LDO50_RS29520;old_locus_tag=BVI1335_910006 NZ_CAJZAO010000373.1 Protein Homology CDS 5185 5940 . + 0 ID=cds-WP_046423227.1;Parent=gene-LDO50_RS29520;Dbxref=GenBank:WP_046423227.1;Name=WP_046423227.1;Ontology_term=GO:0006355,GO:0006547,GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-histidine metabolic process|0006547||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549290.1;locus_tag=LDO50_RS29520;product=histidine utilization repressor;protein_id=WP_046423227.1;transl_table=11 NZ_CAJZAO010000373.1 RefSeq gene 6052 7074 . - . ID=gene-LDO50_RS29525;Name=LDO50_RS29525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29525;old_locus_tag=BVI1335_910007 NZ_CAJZAO010000373.1 Protein Homology CDS 6052 7074 . - 0 ID=cds-WP_059494755.1;Parent=gene-LDO50_RS29525;Dbxref=GenBank:WP_059494755.1;Name=WP_059494755.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725535.1;locus_tag=LDO50_RS29525;product=ABC transporter substrate-binding protein;protein_id=WP_059494755.1;transl_table=11 NZ_CAJZAO010000373.1 cmsearch riboswitch 7214 7335 . - . ID=id-NZ_CAJZAO010000373.1:7214..7335;Dbxref=RFAM:RF00442;Note=guanidine-I (ykkC/yxkD leader) riboswitch%3B Guanidine-I riboswitches control genes whose products are involved in modification or pumping out guanidine as a toxic compound from bacteria%3B This is class of guanidine riboswitches is based on the ykkC/yxkD leader.;bound_moiety=guanidine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAO010000373.1 RefSeq gene 7435 7578 . - . ID=gene-LDO50_RS29530;Name=LDO50_RS29530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29530 NZ_CAJZAO010000373.1 GeneMarkS-2+ CDS 7435 7578 . - 0 ID=cds-WP_155623439.1;Parent=gene-LDO50_RS29530;Dbxref=GenBank:WP_155623439.1;Name=WP_155623439.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS29530;product=hypothetical protein;protein_id=WP_155623439.1;transl_table=11 NZ_CAJZAO010000373.1 cmsearch riboswitch 7811 7946 . + . ID=id-NZ_CAJZAO010000373.1:7811..7946;Dbxref=RFAM:RF00442;Note=guanidine-I (ykkC/yxkD leader) riboswitch%3B Guanidine-I riboswitches control genes whose products are involved in modification or pumping out guanidine as a toxic compound from bacteria%3B This is class of guanidine riboswitches is based on the ykkC/yxkD leader.;bound_moiety=guanidine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAO010000373.1 RefSeq gene 8004 8759 . + . ID=gene-LDO50_RS29535;Name=LDO50_RS29535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29535;old_locus_tag=BVI1335_910009 NZ_CAJZAO010000373.1 Protein Homology CDS 8004 8759 . + 0 ID=cds-WP_059494757.1;Parent=gene-LDO50_RS29535;Dbxref=GenBank:WP_059494757.1;Name=WP_059494757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485567.1;locus_tag=LDO50_RS29535;product=urea amidolyase associated protein UAAP1;protein_id=WP_059494757.1;transl_table=11 NZ_CAJZAO010000373.1 RefSeq gene 8771 9427 . + . ID=gene-LDO50_RS29540;Name=LDO50_RS29540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29540;old_locus_tag=BVI1335_910011 NZ_CAJZAO010000373.1 Protein Homology CDS 8771 9427 . + 0 ID=cds-WP_045579533.1;Parent=gene-LDO50_RS29540;Dbxref=GenBank:WP_045579533.1;Name=WP_045579533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012427096.1;locus_tag=LDO50_RS29540;product=urea amidolyase associated protein UAAP2;protein_id=WP_045579533.1;transl_table=11 NZ_CAJZAO010000373.1 RefSeq gene 9555 13268 . + . ID=gene-LDO50_RS29545;Name=uca;gbkey=Gene;gene=uca;gene_biotype=protein_coding;locus_tag=LDO50_RS29545;old_locus_tag=BVI1335_910013 NZ_CAJZAO010000373.1 Protein Homology CDS 9555 13268 . + 0 ID=cds-WP_059548367.1;Parent=gene-LDO50_RS29545;Dbxref=GenBank:WP_059548367.1;Name=WP_059548367.1;Ontology_term=GO:0019627,GO:0004847;gbkey=CDS;gene=uca;go_function=urea carboxylase activity|0004847||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879726.1;locus_tag=LDO50_RS29545;product=urea carboxylase;protein_id=WP_059548367.1;transl_table=11 NZ_CAJZAO010000373.1 RefSeq gene 13265 15157 . + . ID=gene-LDO50_RS29550;Name=atzF;gbkey=Gene;gene=atzF;gene_biotype=protein_coding;locus_tag=LDO50_RS29550;old_locus_tag=BVI1335_910014 NZ_CAJZAO010000373.1 Protein Homology CDS 13265 15157 . + 0 ID=cds-WP_175949528.1;Parent=gene-LDO50_RS29550;Dbxref=GenBank:WP_175949528.1;Name=WP_175949528.1;Ontology_term=GO:0019627,GO:0004039;gbkey=CDS;gene=atzF;go_function=allophanate hydrolase activity|0004039||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498064.1;locus_tag=LDO50_RS29550;product=allophanate hydrolase;protein_id=WP_175949528.1;transl_table=11 NZ_CAJZAO010000373.1 RefSeq gene 15221 16195 . + . ID=gene-LDO50_RS29555;Name=LDO50_RS29555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29555;old_locus_tag=BVI1335_910015 NZ_CAJZAO010000373.1 Protein Homology CDS 15221 16195 . + 0 ID=cds-WP_059494763.1;Parent=gene-LDO50_RS29555;Dbxref=GenBank:WP_059494763.1;Name=WP_059494763.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485545.1;locus_tag=LDO50_RS29555;product=ABC transporter permease;protein_id=WP_059494763.1;transl_table=11 NZ_CAJZAO010000373.1 RefSeq gene 16241 17152 . + . ID=gene-LDO50_RS29560;Name=LDO50_RS29560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29560;old_locus_tag=BVI1335_910016 NZ_CAJZAO010000373.1 Protein Homology CDS 16241 17152 . + 0 ID=cds-WP_175949529.1;Parent=gene-LDO50_RS29560;Dbxref=GenBank:WP_175949529.1;Name=WP_175949529.1;Ontology_term=GO:0006810,GO:0005215,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549110.1;locus_tag=LDO50_RS29560;product=ABC transporter ATP-binding protein;protein_id=WP_175949529.1;transl_table=11 NZ_CAJZAO010000373.1 RefSeq gene 17839 17973 . + . ID=gene-LDO50_RS30940;Name=LDO50_RS30940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30940 NZ_CAJZAO010000373.1 GeneMarkS-2+ CDS 17839 17973 . + 0 ID=cds-WP_257785818.1;Parent=gene-LDO50_RS30940;Dbxref=GenBank:WP_257785818.1;Name=WP_257785818.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS30940;product=hypothetical protein;protein_id=WP_257785818.1;transl_table=11 NZ_CAJZAO010000373.1 RefSeq gene 18107 18595 . + . ID=gene-LDO50_RS29565;Name=LDO50_RS29565;end_range=18595,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29565;old_locus_tag=BVI1335_910019;partial=true NZ_CAJZAO010000373.1 Protein Homology CDS 18107 18595 . + 0 ID=cds-WP_372586127.1;Parent=gene-LDO50_RS29565;Dbxref=GenBank:WP_372586127.1;Name=WP_372586127.1;Ontology_term=GO:0030976;end_range=18595,.;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725543.1;locus_tag=LDO50_RS29565;partial=true;product=thiamine pyrophosphate-binding protein;protein_id=WP_372586127.1;transl_table=11 ##sequence-region NZ_CAJZAO010000374.1 1 71923 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000374.1 RefSeq region 1 71923 . + . ID=NZ_CAJZAO010000374.1:1..71923;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_92 NZ_CAJZAO010000374.1 RefSeq gene 1 1358 . + . ID=gene-LDO50_RS29570;Name=hemDX;gbkey=Gene;gene=hemDX;gene_biotype=protein_coding;locus_tag=LDO50_RS29570;old_locus_tag=BVI1335_920001;partial=true;start_range=.,1 NZ_CAJZAO010000374.1 Protein Homology CDS 1 1358 . + 2 ID=cds-WP_224020497.1;Parent=gene-LDO50_RS29570;Dbxref=GenBank:WP_224020497.1;Name=WP_224020497.1;Ontology_term=GO:0033014,GO:0004852;gbkey=CDS;gene=hemDX;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010114401.1;locus_tag=LDO50_RS29570;partial=true;product=fused uroporphyrinogen-III synthase HemD/membrane protein HemX;protein_id=WP_224020497.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 1361 2548 . + . ID=gene-LDO50_RS29575;Name=LDO50_RS29575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29575;old_locus_tag=BVI1335_920002 NZ_CAJZAO010000374.1 Protein Homology CDS 1361 2548 . + 0 ID=cds-WP_014723454.1;Parent=gene-LDO50_RS29575;Dbxref=GenBank:WP_014723454.1;Name=WP_014723454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193604.1;locus_tag=LDO50_RS29575;product=heme biosynthesis protein HemY;protein_id=WP_014723454.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 2674 3978 . - . ID=gene-LDO50_RS29580;Name=LDO50_RS29580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29580;old_locus_tag=BVI1335_920003 NZ_CAJZAO010000374.1 Protein Homology CDS 2674 3978 . - 0 ID=cds-WP_011885696.1;Parent=gene-LDO50_RS29580;Dbxref=GenBank:WP_011885696.1;Name=WP_011885696.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753435.1;locus_tag=LDO50_RS29580;product=MFS transporter;protein_id=WP_011885696.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 4121 4879 . - . ID=gene-LDO50_RS29585;Name=LDO50_RS29585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29585;old_locus_tag=BVI1335_920004 NZ_CAJZAO010000374.1 Protein Homology CDS 4121 4879 . - 0 ID=cds-WP_011885695.1;Parent=gene-LDO50_RS29585;Dbxref=GenBank:WP_011885695.1;Name=WP_011885695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543860.1;locus_tag=LDO50_RS29585;product=SDR family oxidoreductase;protein_id=WP_011885695.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 4949 6388 . - . ID=gene-LDO50_RS29590;Name=LDO50_RS29590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29590;old_locus_tag=BVI1335_920005 NZ_CAJZAO010000374.1 Protein Homology CDS 4949 6388 . - 0 ID=cds-WP_011885694.1;Parent=gene-LDO50_RS29590;Dbxref=GenBank:WP_011885694.1;Name=WP_011885694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352864.1;locus_tag=LDO50_RS29590;product=aldehyde dehydrogenase family protein;protein_id=WP_011885694.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 6628 7155 . + . ID=gene-LDO50_RS29595;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=LDO50_RS29595;old_locus_tag=BVI1335_920006 NZ_CAJZAO010000374.1 Protein Homology CDS 6628 7155 . + 0 ID=cds-WP_011885693.1;Parent=gene-LDO50_RS29595;Dbxref=GenBank:WP_011885693.1;Name=WP_011885693.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007587974.1;locus_tag=LDO50_RS29595;product=inorganic diphosphatase;protein_id=WP_011885693.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 7212 7997 . - . ID=gene-LDO50_RS29600;Name=LDO50_RS29600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29600;old_locus_tag=BVI1335_920007 NZ_CAJZAO010000374.1 Protein Homology CDS 7212 7997 . - 0 ID=cds-WP_060081612.1;Parent=gene-LDO50_RS29600;Dbxref=GenBank:WP_060081612.1;Name=WP_060081612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723449.1;locus_tag=LDO50_RS29600;product=GIY-YIG nuclease family protein;protein_id=WP_060081612.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 8078 9256 . - . ID=gene-LDO50_RS29605;Name=LDO50_RS29605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29605;old_locus_tag=BVI1335_920008 NZ_CAJZAO010000374.1 Protein Homology CDS 8078 9256 . - 0 ID=cds-WP_011885691.1;Parent=gene-LDO50_RS29605;Dbxref=GenBank:WP_011885691.1;Name=WP_011885691.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885691.1;locus_tag=LDO50_RS29605;product=GNAT family N-acetyltransferase;protein_id=WP_011885691.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 9365 11077 . + . ID=gene-LDO50_RS29610;Name=LDO50_RS29610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29610;old_locus_tag=BVI1335_920009 NZ_CAJZAO010000374.1 Protein Homology CDS 9365 11077 . + 0 ID=cds-WP_011885690.1;Parent=gene-LDO50_RS29610;Dbxref=GenBank:WP_011885690.1;Name=WP_011885690.1;Ontology_term=GO:0009435,GO:0003952,GO:0005524;gbkey=CDS;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,ATP binding|0005524||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545936.1;locus_tag=LDO50_RS29610;product=NAD+ synthase;protein_id=WP_011885690.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 11183 11521 . + . ID=gene-LDO50_RS29615;Name=LDO50_RS29615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29615;old_locus_tag=BVI1335_920010 NZ_CAJZAO010000374.1 Protein Homology CDS 11183 11521 . + 0 ID=cds-WP_006398637.1;Parent=gene-LDO50_RS29615;Dbxref=GenBank:WP_006398637.1;Name=WP_006398637.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018419771.1;locus_tag=LDO50_RS29615;product=P-II family nitrogen regulator;protein_id=WP_006398637.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 11682 12767 . - . ID=gene-LDO50_RS29620;Name=LDO50_RS29620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29620;old_locus_tag=BVI1335_920011 NZ_CAJZAO010000374.1 Protein Homology CDS 11682 12767 . - 0 ID=cds-WP_011885689.1;Parent=gene-LDO50_RS29620;Dbxref=GenBank:WP_011885689.1;Name=WP_011885689.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398638.1;locus_tag=LDO50_RS29620;product=porin;protein_id=WP_011885689.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 13350 14276 . - . ID=gene-LDO50_RS29625;Name=LDO50_RS29625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29625;old_locus_tag=BVI1335_920013 NZ_CAJZAO010000374.1 Protein Homology CDS 13350 14276 . - 0 ID=cds-WP_060121976.1;Parent=gene-LDO50_RS29625;Dbxref=GenBank:WP_060121976.1;Name=WP_060121976.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885688.1;locus_tag=LDO50_RS29625;product=LysR family transcriptional regulator;protein_id=WP_060121976.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 14413 14910 . + . ID=gene-LDO50_RS29630;Name=LDO50_RS29630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29630;old_locus_tag=BVI1335_920014 NZ_CAJZAO010000374.1 Protein Homology CDS 14413 14910 . + 0 ID=cds-WP_045578886.1;Parent=gene-LDO50_RS29630;Dbxref=GenBank:WP_045578886.1;Name=WP_045578886.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212920.1;locus_tag=LDO50_RS29630;product=GNAT family N-acetyltransferase;protein_id=WP_045578886.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 14969 15748 . - . ID=gene-LDO50_RS29635;Name=LDO50_RS29635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29635;old_locus_tag=BVI1335_920015 NZ_CAJZAO010000374.1 Protein Homology CDS 14969 15748 . - 0 ID=cds-WP_034192591.1;Parent=gene-LDO50_RS29635;Dbxref=GenBank:WP_034192591.1;Name=WP_034192591.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896370.1;locus_tag=LDO50_RS29635;product=ABC transporter ATP-binding protein;protein_id=WP_034192591.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 15767 16480 . - . ID=gene-LDO50_RS29640;Name=LDO50_RS29640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29640;old_locus_tag=BVI1335_920016 NZ_CAJZAO010000374.1 Protein Homology CDS 15767 16480 . - 0 ID=cds-WP_011885685.1;Parent=gene-LDO50_RS29640;Dbxref=GenBank:WP_011885685.1;Name=WP_011885685.1;Ontology_term=GO:0022857,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065252.1;locus_tag=LDO50_RS29640;product=ABC transporter permease;protein_id=WP_011885685.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 16477 17166 . - . ID=gene-LDO50_RS29645;Name=LDO50_RS29645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29645;old_locus_tag=BVI1335_920017 NZ_CAJZAO010000374.1 Protein Homology CDS 16477 17166 . - 0 ID=cds-WP_011885684.1;Parent=gene-LDO50_RS29645;Dbxref=GenBank:WP_011885684.1;Name=WP_011885684.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522525.1;locus_tag=LDO50_RS29645;product=ABC transporter permease;protein_id=WP_011885684.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 17406 18182 . - . ID=gene-LDO50_RS29650;Name=LDO50_RS29650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29650;old_locus_tag=BVI1335_920018 NZ_CAJZAO010000374.1 Protein Homology CDS 17406 18182 . - 0 ID=cds-WP_034192590.1;Parent=gene-LDO50_RS29650;Dbxref=GenBank:WP_034192590.1;Name=WP_034192590.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024925.1;locus_tag=LDO50_RS29650;product=ABC transporter substrate-binding protein;protein_id=WP_034192590.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 18675 19223 . - . ID=gene-LDO50_RS29655;Name=LDO50_RS29655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29655;old_locus_tag=BVI1335_920020 NZ_CAJZAO010000374.1 Protein Homology CDS 18675 19223 . - 0 ID=cds-WP_011885682.1;Parent=gene-LDO50_RS29655;Dbxref=GenBank:WP_011885682.1;Name=WP_011885682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497152.1;locus_tag=LDO50_RS29655;product=periplasmic heavy metal sensor;protein_id=WP_011885682.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 19450 20175 . + . ID=gene-LDO50_RS29660;Name=LDO50_RS29660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29660;old_locus_tag=BVI1335_920021 NZ_CAJZAO010000374.1 Protein Homology CDS 19450 20175 . + 0 ID=cds-WP_009693256.1;Parent=gene-LDO50_RS29660;Dbxref=GenBank:WP_009693256.1;Name=WP_009693256.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699030.1;locus_tag=LDO50_RS29660;product=response regulator;protein_id=WP_009693256.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 20159 21475 . + . ID=gene-LDO50_RS29665;Name=LDO50_RS29665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29665;old_locus_tag=BVI1335_920022 NZ_CAJZAO010000374.1 Protein Homology CDS 20159 21475 . + 0 ID=cds-WP_011885681.1;Parent=gene-LDO50_RS29665;Dbxref=GenBank:WP_011885681.1;Name=WP_011885681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694353.1;locus_tag=LDO50_RS29665;product=ATP-binding protein;protein_id=WP_011885681.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 21516 21782 . - . ID=gene-LDO50_RS29670;Name=LDO50_RS29670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29670;old_locus_tag=BVI1335_920023 NZ_CAJZAO010000374.1 Protein Homology CDS 21516 21782 . - 0 ID=cds-WP_011885680.1;Parent=gene-LDO50_RS29670;Dbxref=GenBank:WP_011885680.1;Name=WP_011885680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198606.1;locus_tag=LDO50_RS29670;product=double-stranded DNA-specific endonuclease;protein_id=WP_011885680.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 22287 24044 . + . ID=gene-LDO50_RS29675;Name=LDO50_RS29675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29675;old_locus_tag=BVI1335_920024 NZ_CAJZAO010000374.1 Protein Homology CDS 22287 24044 . + 0 ID=cds-WP_011885679.1;Parent=gene-LDO50_RS29675;Dbxref=GenBank:WP_011885679.1;Name=WP_011885679.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892433.1;locus_tag=LDO50_RS29675;product=ABC transporter permease;protein_id=WP_011885679.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq pseudogene 24067 24299 . + . ID=gene-LDO50_RS32140;Name=LDO50_RS32140;end_range=24299,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS32140;old_locus_tag=BVI1335_920025;partial=true;pseudo=true NZ_CAJZAO010000374.1 Protein Homology CDS 24067 24299 . + 0 ID=cds-LDO50_RS32140;Parent=gene-LDO50_RS32140;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0005524;end_range=24299,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892432.1;locus_tag=LDO50_RS32140;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 24310 25334 . + . ID=gene-LDO50_RS29680;Name=LDO50_RS29680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29680;old_locus_tag=BVI1335_920026;partial=true;start_range=.,24310 NZ_CAJZAO010000374.1 Protein Homology CDS 24310 25334 . + 2 ID=cds-WP_443797884.1;Parent=gene-LDO50_RS29680;Dbxref=GenBank:WP_443797884.1;Name=WP_443797884.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892432.1;locus_tag=LDO50_RS29680;partial=true;product=ABC transporter ATP-binding protein;protein_id=WP_443797884.1;start_range=.,24310;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 25405 25902 . - . ID=gene-LDO50_RS29685;Name=LDO50_RS29685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29685;old_locus_tag=BVI1335_920027 NZ_CAJZAO010000374.1 Protein Homology CDS 25405 25902 . - 0 ID=cds-WP_059474959.1;Parent=gene-LDO50_RS29685;Dbxref=GenBank:WP_059474959.1;Name=WP_059474959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896382.1;locus_tag=LDO50_RS29685;product=hypothetical protein;protein_id=WP_059474959.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 25899 26489 . - . ID=gene-LDO50_RS29690;Name=LDO50_RS29690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29690;old_locus_tag=BVI1335_920028 NZ_CAJZAO010000374.1 Protein Homology CDS 25899 26489 . - 0 ID=cds-WP_224020498.1;Parent=gene-LDO50_RS29690;Dbxref=GenBank:WP_224020498.1;Name=WP_224020498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896383.1;locus_tag=LDO50_RS29690;product=hypothetical protein;protein_id=WP_224020498.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 26738 26935 . + . ID=gene-LDO50_RS29695;Name=LDO50_RS29695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29695;old_locus_tag=BVI1335_920029 NZ_CAJZAO010000374.1 Protein Homology CDS 26738 26935 . + 0 ID=cds-WP_059606844.1;Parent=gene-LDO50_RS29695;Dbxref=GenBank:WP_059606844.1;Name=WP_059606844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896384.1;locus_tag=LDO50_RS29695;product=hypothetical protein;protein_id=WP_059606844.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 27071 28492 . + . ID=gene-LDO50_RS29700;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=LDO50_RS29700;old_locus_tag=BVI1335_920030 NZ_CAJZAO010000374.1 Protein Homology CDS 27071 28492 . + 0 ID=cds-WP_011885675.1;Parent=gene-LDO50_RS29700;Dbxref=GenBank:WP_011885675.1;Name=WP_011885675.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657614.1;locus_tag=LDO50_RS29700;product=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming);protein_id=WP_011885675.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 28485 29063 . + . ID=gene-LDO50_RS29705;Name=LDO50_RS29705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29705;old_locus_tag=BVI1335_920031 NZ_CAJZAO010000374.1 Protein Homology CDS 28485 29063 . + 0 ID=cds-WP_011885674.1;Parent=gene-LDO50_RS29705;Dbxref=GenBank:WP_011885674.1;Name=WP_011885674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761349.1;locus_tag=LDO50_RS29705;product=AAA family ATPase;protein_id=WP_011885674.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 29089 30456 . - . ID=gene-LDO50_RS29710;Name=LDO50_RS29710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29710;old_locus_tag=BVI1335_920032 NZ_CAJZAO010000374.1 Protein Homology CDS 29089 30456 . - 0 ID=cds-WP_041493874.1;Parent=gene-LDO50_RS29710;Dbxref=GenBank:WP_041493874.1;Name=WP_041493874.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545919.1;locus_tag=LDO50_RS29710;product=MFS transporter;protein_id=WP_041493874.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 30642 31022 . - . ID=gene-LDO50_RS29715;Name=LDO50_RS29715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29715;old_locus_tag=BVI1335_920033 NZ_CAJZAO010000374.1 Protein Homology CDS 30642 31022 . - 0 ID=cds-WP_059463200.1;Parent=gene-LDO50_RS29715;Dbxref=GenBank:WP_059463200.1;Name=WP_059463200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723435.1;locus_tag=LDO50_RS29715;product=DUF5594 family protein;protein_id=WP_059463200.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 31141 31542 . + . ID=gene-LDO50_RS29720;Name=LDO50_RS29720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29720;old_locus_tag=BVI1335_920034 NZ_CAJZAO010000374.1 Protein Homology CDS 31141 31542 . + 0 ID=cds-WP_011885671.1;Parent=gene-LDO50_RS29720;Dbxref=GenBank:WP_011885671.1;Name=WP_011885671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364418.1;locus_tag=LDO50_RS29720;product=hypothetical protein;protein_id=WP_011885671.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 31714 32040 . - . ID=gene-LDO50_RS29725;Name=LDO50_RS29725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29725;old_locus_tag=BVI1335_920035 NZ_CAJZAO010000374.1 Protein Homology CDS 31714 32040 . - 0 ID=cds-WP_126220386.1;Parent=gene-LDO50_RS29725;Dbxref=GenBank:WP_126220386.1;Name=WP_126220386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328976.1;locus_tag=LDO50_RS29725;product=hypothetical protein;protein_id=WP_126220386.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 32184 32684 . + . ID=gene-LDO50_RS29730;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=LDO50_RS29730;old_locus_tag=BVI1335_920036 NZ_CAJZAO010000374.1 Protein Homology CDS 32184 32684 . + 0 ID=cds-WP_059463202.1;Parent=gene-LDO50_RS29730;Dbxref=GenBank:WP_059463202.1;Name=WP_059463202.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364416.1;locus_tag=LDO50_RS29730;product=serine protease inhibitor ecotin;protein_id=WP_059463202.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 33054 33401 . + . ID=gene-LDO50_RS29740;Name=LDO50_RS29740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29740;old_locus_tag=BVI1335_920037 NZ_CAJZAO010000374.1 GeneMarkS-2+ CDS 33054 33401 . + 0 ID=cds-WP_059463203.1;Parent=gene-LDO50_RS29740;Dbxref=GenBank:WP_059463203.1;Name=WP_059463203.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS29740;product=hypothetical protein;protein_id=WP_059463203.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 34122 34769 . - . ID=gene-LDO50_RS29745;Name=LDO50_RS29745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29745;old_locus_tag=BVI1335_920038 NZ_CAJZAO010000374.1 GeneMarkS-2+ CDS 34122 34769 . - 0 ID=cds-WP_059461258.1;Parent=gene-LDO50_RS29745;Dbxref=GenBank:WP_059461258.1;Name=WP_059461258.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS29745;product=hypothetical protein;protein_id=WP_059461258.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq pseudogene 34926 35499 . - . ID=gene-LDO50_RS29750;Name=LDO50_RS29750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS29750;pseudo=true NZ_CAJZAO010000374.1 Protein Homology CDS 34926 35499 . - 0 ID=cds-LDO50_RS29750;Parent=gene-LDO50_RS29750;Note=frameshifted;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009911645.1;locus_tag=LDO50_RS29750;product=recombinase family protein;pseudo=true;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 35656 37233 . + . ID=gene-LDO50_RS29755;Name=LDO50_RS29755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29755;old_locus_tag=BVI1335_920041 NZ_CAJZAO010000374.1 Protein Homology CDS 35656 37233 . + 0 ID=cds-WP_196484622.1;Parent=gene-LDO50_RS29755;Dbxref=GenBank:WP_196484622.1;Name=WP_196484622.1;Ontology_term=GO:0007165,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF025056.6;locus_tag=LDO50_RS29755;product=TIR domain-containing protein;protein_id=WP_196484622.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq pseudogene 37335 37703 . - . ID=gene-LDO50_RS29760;Name=LDO50_RS29760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS29760;old_locus_tag=BVI1335_920042;partial=true;pseudo=true;start_range=.,37335 NZ_CAJZAO010000374.1 Protein Homology CDS 37335 37703 . - 0 ID=cds-LDO50_RS29760;Parent=gene-LDO50_RS29760;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526387.1;locus_tag=LDO50_RS29760;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,37335;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 37867 37941 . - . ID=gene-LDO50_RS29765;Name=LDO50_RS29765;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS29765;old_locus_tag=BVI1335_TRNA35 NZ_CAJZAO010000374.1 tRNAscan-SE tRNA 37867 37941 . - . ID=rna-LDO50_RS29765;Parent=gene-LDO50_RS29765;anticodon=(pos:complement(37906..37908));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS29765;product=tRNA-Arg NZ_CAJZAO010000374.1 tRNAscan-SE exon 37867 37941 . - . ID=exon-LDO50_RS29765-1;Parent=rna-LDO50_RS29765;anticodon=(pos:complement(37906..37908));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS29765;product=tRNA-Arg NZ_CAJZAO010000374.1 RefSeq gene 38092 38274 . - . ID=gene-LDO50_RS29770;Name=LDO50_RS29770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29770;old_locus_tag=BVI1335_920043 NZ_CAJZAO010000374.1 Protein Homology CDS 38092 38274 . - 0 ID=cds-WP_011885645.1;Parent=gene-LDO50_RS29770;Dbxref=GenBank:WP_011885645.1;Name=WP_011885645.1;Ontology_term=GO:0043448,GO:0005506,GO:0009055;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=alkane catabolic process|0043448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186320.1;locus_tag=LDO50_RS29770;product=rubredoxin;protein_id=WP_011885645.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 38470 38874 . + . ID=gene-LDO50_RS29775;Name=LDO50_RS29775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29775;old_locus_tag=BVI1335_920044 NZ_CAJZAO010000374.1 Protein Homology CDS 38470 38874 . + 0 ID=cds-WP_011885644.1;Parent=gene-LDO50_RS29775;Dbxref=GenBank:WP_011885644.1;Name=WP_011885644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328968.1;locus_tag=LDO50_RS29775;product=DUF4399 domain-containing protein;protein_id=WP_011885644.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 39120 41069 . + . ID=gene-LDO50_RS29780;Name=LDO50_RS29780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29780;old_locus_tag=BVI1335_920045 NZ_CAJZAO010000374.1 Protein Homology CDS 39120 41069 . + 0 ID=cds-WP_046422694.1;Parent=gene-LDO50_RS29780;Dbxref=GenBank:WP_046422694.1;Name=WP_046422694.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364399.1;locus_tag=LDO50_RS29780;product=ATP-binding cassette domain-containing protein;protein_id=WP_046422694.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 41308 43290 . + . ID=gene-LDO50_RS29785;Name=LDO50_RS29785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29785;old_locus_tag=BVI1335_920046 NZ_CAJZAO010000374.1 Protein Homology CDS 41308 43290 . + 0 ID=cds-WP_011885642.1;Parent=gene-LDO50_RS29785;Dbxref=GenBank:WP_011885642.1;Name=WP_011885642.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254672.1;locus_tag=LDO50_RS29785;product=DNA topoisomerase IV subunit B;protein_id=WP_011885642.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 43359 45680 . + . ID=gene-LDO50_RS29790;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=LDO50_RS29790;old_locus_tag=BVI1335_920047 NZ_CAJZAO010000374.1 Protein Homology CDS 43359 45680 . + 0 ID=cds-WP_011885641.1;Parent=gene-LDO50_RS29790;Dbxref=GenBank:WP_011885641.1;Name=WP_011885641.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892382.1;locus_tag=LDO50_RS29790;product=DNA topoisomerase IV subunit A;protein_id=WP_011885641.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 45940 46398 . + . ID=gene-LDO50_RS29795;Name=LDO50_RS29795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29795;old_locus_tag=BVI1335_920048 NZ_CAJZAO010000374.1 Protein Homology CDS 45940 46398 . + 0 ID=cds-WP_011885640.1;Parent=gene-LDO50_RS29795;Dbxref=GenBank:WP_011885640.1;Name=WP_011885640.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413474.1;locus_tag=LDO50_RS29795;product=CopD family protein;protein_id=WP_011885640.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 46474 47358 . - . ID=gene-LDO50_RS29800;Name=LDO50_RS29800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29800;old_locus_tag=BVI1335_920049 NZ_CAJZAO010000374.1 Protein Homology CDS 46474 47358 . - 0 ID=cds-WP_011885639.1;Parent=gene-LDO50_RS29800;Dbxref=GenBank:WP_011885639.1;Name=WP_011885639.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185890.1;locus_tag=LDO50_RS29800;product=LysR family transcriptional regulator;protein_id=WP_011885639.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 47472 47918 . + . ID=gene-LDO50_RS29805;Name=LDO50_RS29805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29805;old_locus_tag=BVI1335_920050 NZ_CAJZAO010000374.1 Protein Homology CDS 47472 47918 . + 0 ID=cds-WP_011885638.1;Parent=gene-LDO50_RS29805;Dbxref=GenBank:WP_011885638.1;Name=WP_011885638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352815.1;locus_tag=LDO50_RS29805;product=multidrug/biocide efflux PACE transporter;protein_id=WP_011885638.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 47955 49163 . - . ID=gene-LDO50_RS29810;Name=LDO50_RS29810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29810;old_locus_tag=BVI1335_920051 NZ_CAJZAO010000374.1 Protein Homology CDS 47955 49163 . - 0 ID=cds-WP_014723428.1;Parent=gene-LDO50_RS29810;Dbxref=GenBank:WP_014723428.1;Name=WP_014723428.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723428.1;locus_tag=LDO50_RS29810;product=chromate transporter;protein_id=WP_014723428.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 49358 51697 . - . ID=gene-LDO50_RS29815;Name=LDO50_RS29815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29815;old_locus_tag=BVI1335_920052 NZ_CAJZAO010000374.1 Protein Homology CDS 49358 51697 . - 0 ID=cds-WP_059461263.1;Parent=gene-LDO50_RS29815;Dbxref=GenBank:WP_059461263.1;Name=WP_059461263.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885636.1;locus_tag=LDO50_RS29815;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_059461263.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 51918 52799 . - . ID=gene-LDO50_RS29820;Name=LDO50_RS29820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29820;old_locus_tag=BVI1335_920053 NZ_CAJZAO010000374.1 Protein Homology CDS 51918 52799 . - 0 ID=cds-WP_014723426.1;Parent=gene-LDO50_RS29820;Dbxref=GenBank:WP_014723426.1;Name=WP_014723426.1;Ontology_term=GO:0009058,GO:0016853,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isomerase activity|0016853||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212951.1;locus_tag=LDO50_RS29820;product=PhzF family phenazine biosynthesis protein;protein_id=WP_014723426.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 52813 53271 . - . ID=gene-LDO50_RS29825;Name=LDO50_RS29825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29825;old_locus_tag=BVI1335_920054 NZ_CAJZAO010000374.1 Protein Homology CDS 52813 53271 . - 0 ID=cds-WP_011885634.1;Parent=gene-LDO50_RS29825;Dbxref=GenBank:WP_011885634.1;Name=WP_011885634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398680.1;locus_tag=LDO50_RS29825;product=RidA family protein;protein_id=WP_011885634.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 53313 54494 . - . ID=gene-LDO50_RS29830;Name=LDO50_RS29830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29830;old_locus_tag=BVI1335_920055 NZ_CAJZAO010000374.1 Protein Homology CDS 53313 54494 . - 0 ID=cds-WP_011885633.1;Parent=gene-LDO50_RS29830;Dbxref=GenBank:WP_011885633.1;Name=WP_011885633.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522482.1;locus_tag=LDO50_RS29830;product=aminotransferase-like domain-containing protein;protein_id=WP_011885633.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 54648 55556 . - . ID=gene-LDO50_RS29835;Name=LDO50_RS29835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29835;old_locus_tag=BVI1335_920056 NZ_CAJZAO010000374.1 Protein Homology CDS 54648 55556 . - 0 ID=cds-WP_011885632.1;Parent=gene-LDO50_RS29835;Dbxref=GenBank:WP_011885632.1;Name=WP_011885632.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896405.1;locus_tag=LDO50_RS29835;product=DMT family transporter;protein_id=WP_011885632.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 55632 56327 . - . ID=gene-LDO50_RS29840;Name=LDO50_RS29840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29840;old_locus_tag=BVI1335_920057 NZ_CAJZAO010000374.1 Protein Homology CDS 55632 56327 . - 0 ID=cds-WP_224020499.1;Parent=gene-LDO50_RS29840;Dbxref=GenBank:WP_224020499.1;Name=WP_224020499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494064.1;locus_tag=LDO50_RS29840;product=VOC family protein;protein_id=WP_224020499.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 56523 57983 . + . ID=gene-LDO50_RS29845;Name=LDO50_RS29845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29845;old_locus_tag=BVI1335_920058 NZ_CAJZAO010000374.1 Protein Homology CDS 56523 57983 . + 0 ID=cds-WP_034194022.1;Parent=gene-LDO50_RS29845;Dbxref=GenBank:WP_034194022.1;Name=WP_034194022.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533687.1;locus_tag=LDO50_RS29845;product=aminotransferase-like domain-containing protein;protein_id=WP_034194022.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 58139 60037 . + . ID=gene-LDO50_RS29850;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=LDO50_RS29850;old_locus_tag=BVI1335_920059 NZ_CAJZAO010000374.1 Protein Homology CDS 58139 60037 . + 0 ID=cds-WP_045578897.1;Parent=gene-LDO50_RS29850;Dbxref=GenBank:WP_045578897.1;Name=WP_045578897.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102343.1;locus_tag=LDO50_RS29850;product=molecular chaperone HtpG;protein_id=WP_045578897.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 60046 60642 . + . ID=gene-LDO50_RS29855;Name=LDO50_RS29855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29855;old_locus_tag=BVI1335_920060 NZ_CAJZAO010000374.1 Protein Homology CDS 60046 60642 . + 0 ID=cds-WP_014723421.1;Parent=gene-LDO50_RS29855;Dbxref=GenBank:WP_014723421.1;Name=WP_014723421.1;Ontology_term=GO:0006744,GO:0008813,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=chorismate lyase activity|0008813||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328957.1;locus_tag=LDO50_RS29855;product=chorismate--pyruvate lyase family protein;protein_id=WP_014723421.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 60642 61118 . + . ID=gene-LDO50_RS29860;Name=LDO50_RS29860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29860;old_locus_tag=BVI1335_920061 NZ_CAJZAO010000374.1 Protein Homology CDS 60642 61118 . + 0 ID=cds-WP_014723420.1;Parent=gene-LDO50_RS29860;Dbxref=GenBank:WP_014723420.1;Name=WP_014723420.1;Ontology_term=GO:0006285,GO:0033958;gbkey=CDS;go_function=DNA-deoxyinosine glycosylase activity|0033958||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723420.1;locus_tag=LDO50_RS29860;product=DNA-deoxyinosine glycosylase;protein_id=WP_014723420.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 61143 61451 . - . ID=gene-LDO50_RS29865;Name=LDO50_RS29865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29865;old_locus_tag=BVI1335_920062 NZ_CAJZAO010000374.1 Protein Homology CDS 61143 61451 . - 0 ID=cds-WP_011885626.1;Parent=gene-LDO50_RS29865;Dbxref=GenBank:WP_011885626.1;Name=WP_011885626.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885626.1;locus_tag=LDO50_RS29865;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_011885626.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 61448 61726 . - . ID=gene-LDO50_RS29870;Name=LDO50_RS29870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29870;old_locus_tag=BVI1335_920063 NZ_CAJZAO010000374.1 Protein Homology CDS 61448 61726 . - 0 ID=cds-WP_041493977.1;Parent=gene-LDO50_RS29870;Dbxref=GenBank:WP_041493977.1;Name=WP_041493977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885625.1;locus_tag=LDO50_RS29870;product=YlcI/YnfO family protein;protein_id=WP_041493977.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 61895 62812 . + . ID=gene-LDO50_RS29875;Name=LDO50_RS29875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29875;old_locus_tag=BVI1335_920064 NZ_CAJZAO010000374.1 Protein Homology CDS 61895 62812 . + 0 ID=cds-WP_034194027.1;Parent=gene-LDO50_RS29875;Dbxref=GenBank:WP_034194027.1;Name=WP_034194027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526403.1;locus_tag=LDO50_RS29875;product=spermidine synthase;protein_id=WP_034194027.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 63011 63253 . + . ID=gene-LDO50_RS29880;Name=LDO50_RS29880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29880;old_locus_tag=BVI1335_920065 NZ_CAJZAO010000374.1 Protein Homology CDS 63011 63253 . + 0 ID=cds-WP_011885623.1;Parent=gene-LDO50_RS29880;Dbxref=GenBank:WP_011885623.1;Name=WP_011885623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490660.1;locus_tag=LDO50_RS29880;product=DUF3311 domain-containing protein;protein_id=WP_011885623.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 63250 64800 . + . ID=gene-LDO50_RS29885;Name=mctP;gbkey=Gene;gene=mctP;gene_biotype=protein_coding;locus_tag=LDO50_RS29885;old_locus_tag=BVI1335_920066 NZ_CAJZAO010000374.1 Protein Homology CDS 63250 64800 . + 0 ID=cds-WP_014723417.1;Parent=gene-LDO50_RS29885;Dbxref=GenBank:WP_014723417.1;Name=WP_014723417.1;Ontology_term=GO:0006848,GO:0015293;gbkey=CDS;gene=mctP;go_function=symporter activity|0015293||IEA;go_process=pyruvate transport|0006848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328952.1;locus_tag=LDO50_RS29885;product=monocarboxylate uptake permease MctP;protein_id=WP_014723417.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 64862 65317 . - . ID=gene-LDO50_RS29890;Name=LDO50_RS29890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29890;old_locus_tag=BVI1335_920067 NZ_CAJZAO010000374.1 Protein Homology CDS 64862 65317 . - 0 ID=cds-WP_011885621.1;Parent=gene-LDO50_RS29890;Dbxref=GenBank:WP_011885621.1;Name=WP_011885621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885621.1;locus_tag=LDO50_RS29890;product=VOC family protein;protein_id=WP_011885621.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 65562 66515 . - . ID=gene-LDO50_RS29895;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=LDO50_RS29895;old_locus_tag=BVI1335_920068 NZ_CAJZAO010000374.1 Protein Homology CDS 65562 66515 . - 0 ID=cds-WP_011885620.1;Parent=gene-LDO50_RS29895;Dbxref=GenBank:WP_011885620.1;Name=WP_011885620.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012432264.1;locus_tag=LDO50_RS29895;product=transaldolase;protein_id=WP_011885620.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 66688 67899 . - . ID=gene-LDO50_RS29900;Name=LDO50_RS29900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29900;old_locus_tag=BVI1335_920069 NZ_CAJZAO010000374.1 Protein Homology CDS 66688 67899 . - 0 ID=cds-WP_014723415.1;Parent=gene-LDO50_RS29900;Dbxref=GenBank:WP_014723415.1;Name=WP_014723415.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186095.1;locus_tag=LDO50_RS29900;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_014723415.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 67956 69131 . - . ID=gene-LDO50_RS29905;Name=LDO50_RS29905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29905;old_locus_tag=BVI1335_920070 NZ_CAJZAO010000374.1 Protein Homology CDS 67956 69131 . - 0 ID=cds-WP_011885618.1;Parent=gene-LDO50_RS29905;Dbxref=GenBank:WP_011885618.1;Name=WP_011885618.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186167.1;locus_tag=LDO50_RS29905;product=vWA domain-containing protein;protein_id=WP_011885618.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 69153 69995 . - . ID=gene-LDO50_RS29910;Name=LDO50_RS29910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29910;old_locus_tag=BVI1335_920071 NZ_CAJZAO010000374.1 Protein Homology CDS 69153 69995 . - 0 ID=cds-WP_034194030.1;Parent=gene-LDO50_RS29910;Dbxref=GenBank:WP_034194030.1;Name=WP_034194030.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186676.1;locus_tag=LDO50_RS29910;product=AAA family ATPase;protein_id=WP_034194030.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 70241 70600 . + . ID=gene-LDO50_RS29915;Name=LDO50_RS29915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29915;old_locus_tag=BVI1335_920072 NZ_CAJZAO010000374.1 Protein Homology CDS 70241 70600 . + 0 ID=cds-WP_011885616.1;Parent=gene-LDO50_RS29915;Dbxref=GenBank:WP_011885616.1;Name=WP_011885616.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601686.1;locus_tag=LDO50_RS29915;product=c-type cytochrome;protein_id=WP_011885616.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 70641 71000 . + . ID=gene-LDO50_RS29920;Name=LDO50_RS29920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29920;old_locus_tag=BVI1335_920073 NZ_CAJZAO010000374.1 Protein Homology CDS 70641 71000 . + 0 ID=cds-WP_011885615.1;Parent=gene-LDO50_RS29920;Dbxref=GenBank:WP_011885615.1;Name=WP_011885615.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761210.1;locus_tag=LDO50_RS29920;product=c-type cytochrome;protein_id=WP_011885615.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq gene 71098 71646 . - . ID=gene-LDO50_RS29925;Name=LDO50_RS29925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29925;old_locus_tag=BVI1335_920074 NZ_CAJZAO010000374.1 Protein Homology CDS 71098 71646 . - 0 ID=cds-WP_372586128.1;Parent=gene-LDO50_RS29925;Dbxref=GenBank:WP_372586128.1;Name=WP_372586128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009980244.1;locus_tag=LDO50_RS29925;product=DUF1841 family protein;protein_id=WP_372586128.1;transl_table=11 NZ_CAJZAO010000374.1 RefSeq pseudogene 71782 71923 . + . ID=gene-LDO50_RS29930;Name=LDO50_RS29930;end_range=71923,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS29930;partial=true;pseudo=true NZ_CAJZAO010000374.1 Protein Homology CDS 71782 71923 . + 0 ID=cds-LDO50_RS29930;Parent=gene-LDO50_RS29930;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=71923,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545870.1;locus_tag=LDO50_RS29930;partial=true;product=EamA/RhaT family transporter;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000375.1 1 9393 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000375.1 RefSeq region 1 9393 . + . ID=NZ_CAJZAO010000375.1:1..9393;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_93 NZ_CAJZAO010000375.1 RefSeq gene 1 2332 . - . ID=gene-LDO50_RS29935;Name=LDO50_RS29935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29935;partial=true;start_range=.,1 NZ_CAJZAO010000375.1 Protein Homology CDS 1 2332 . - 0 ID=cds-WP_224020500.1;Parent=gene-LDO50_RS29935;Dbxref=GenBank:WP_224020500.1;Name=WP_224020500.1;Ontology_term=GO:0015942,GO:0008863;gbkey=CDS;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494734.1;locus_tag=LDO50_RS29935;partial=true;product=molybdopterin oxidoreductase family protein;protein_id=WP_224020500.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000375.1 RefSeq gene 2349 2696 . - . ID=gene-LDO50_RS29940;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=LDO50_RS29940;old_locus_tag=BVI1335_930002 NZ_CAJZAO010000375.1 Protein Homology CDS 2349 2696 . - 0 ID=cds-WP_014724812.1;Parent=gene-LDO50_RS29940;Dbxref=GenBank:WP_014724812.1;Name=WP_014724812.1;Ontology_term=GO:0008942,GO:0051537;gbkey=CDS;gene=nirD;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396957.1;locus_tag=LDO50_RS29940;product=nitrite reductase small subunit NirD;protein_id=WP_014724812.1;transl_table=11 NZ_CAJZAO010000375.1 RefSeq gene 2734 5307 . - . ID=gene-LDO50_RS29945;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=LDO50_RS29945;old_locus_tag=BVI1335_930003 NZ_CAJZAO010000375.1 Protein Homology CDS 2734 5307 . - 0 ID=cds-WP_224020501.1;Parent=gene-LDO50_RS29945;Dbxref=GenBank:WP_224020501.1;Name=WP_224020501.1;Ontology_term=GO:0042128,GO:0008942,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882321.1;locus_tag=LDO50_RS29945;product=nitrite reductase large subunit NirB;protein_id=WP_224020501.1;transl_table=11 NZ_CAJZAO010000375.1 RefSeq gene 5329 6654 . - . ID=gene-LDO50_RS29950;Name=LDO50_RS29950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29950;old_locus_tag=BVI1335_930004 NZ_CAJZAO010000375.1 Protein Homology CDS 5329 6654 . - 0 ID=cds-WP_176300012.1;Parent=gene-LDO50_RS29950;Dbxref=GenBank:WP_176300012.1;Name=WP_176300012.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494732.1;locus_tag=LDO50_RS29950;product=MFS transporter;protein_id=WP_176300012.1;transl_table=11 NZ_CAJZAO010000375.1 RefSeq gene 7325 8095 . + . ID=gene-LDO50_RS29955;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=LDO50_RS29955;old_locus_tag=BVI1335_930006 NZ_CAJZAO010000375.1 Protein Homology CDS 7325 8095 . + 0 ID=cds-WP_034195107.1;Parent=gene-LDO50_RS29955;Dbxref=GenBank:WP_034195107.1;Name=WP_034195107.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724809.1;locus_tag=LDO50_RS29955;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_034195107.1;transl_table=11 NZ_CAJZAO010000375.1 RefSeq gene 8274 8867 . + . ID=gene-LDO50_RS29960;Name=LDO50_RS29960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29960;old_locus_tag=BVI1335_930007 NZ_CAJZAO010000375.1 Protein Homology CDS 8274 8867 . + 0 ID=cds-WP_011882325.1;Parent=gene-LDO50_RS29960;Dbxref=GenBank:WP_011882325.1;Name=WP_011882325.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882325.1;locus_tag=LDO50_RS29960;product=ANTAR domain-containing response regulator;protein_id=WP_011882325.1;transl_table=11 NZ_CAJZAO010000375.1 RefSeq gene 8873 9393 . + . ID=gene-LDO50_RS29965;Name=LDO50_RS29965;end_range=9393,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29965;partial=true NZ_CAJZAO010000375.1 Protein Homology CDS 8873 9393 . + 0 ID=cds-WP_224020502.1;Parent=gene-LDO50_RS29965;Dbxref=GenBank:WP_224020502.1;Name=WP_224020502.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;end_range=9393,.;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216929.1;locus_tag=LDO50_RS29965;partial=true;product=CmpA/NrtA family ABC transporter substrate-binding protein;protein_id=WP_224020502.1;transl_table=11 ##sequence-region NZ_CAJZAO010000376.1 1 28127 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000376.1 RefSeq region 1 28127 . + . ID=NZ_CAJZAO010000376.1:1..28127;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_94 NZ_CAJZAO010000376.1 RefSeq gene 223 1245 . - . ID=gene-LDO50_RS29970;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=LDO50_RS29970;old_locus_tag=BVI1335_940001 NZ_CAJZAO010000376.1 Protein Homology CDS 223 1245 . - 0 ID=cds-WP_059474578.1;Parent=gene-LDO50_RS29970;Dbxref=GenBank:WP_059474578.1;Name=WP_059474578.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884579.1;locus_tag=LDO50_RS29970;product=SMC-Scp complex subunit ScpB;protein_id=WP_059474578.1;transl_table=11 NZ_CAJZAO010000376.1 RefSeq gene 1643 2545 . - . ID=gene-LDO50_RS29975;Name=LDO50_RS29975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29975;old_locus_tag=BVI1335_940002 NZ_CAJZAO010000376.1 Protein Homology CDS 1643 2545 . - 0 ID=cds-WP_059461928.1;Parent=gene-LDO50_RS29975;Dbxref=GenBank:WP_059461928.1;Name=WP_059461928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193481.1;locus_tag=LDO50_RS29975;product=LysR family transcriptional regulator;protein_id=WP_059461928.1;transl_table=11 NZ_CAJZAO010000376.1 RefSeq pseudogene 2974 3369 . + . ID=gene-LDO50_RS29980;Name=LDO50_RS29980;end_range=3369,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS29980;old_locus_tag=BVI1335_940003;partial=true;pseudo=true NZ_CAJZAO010000376.1 Protein Homology CDS 2974 3369 . + 0 ID=cds-LDO50_RS29980;Parent=gene-LDO50_RS29980;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004803;end_range=3369,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603844.1;locus_tag=LDO50_RS29980;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CAJZAO010000376.1 RefSeq gene 3569 3820 . + . ID=gene-LDO50_RS29985;Name=LDO50_RS29985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29985;old_locus_tag=BVI1335_940004 NZ_CAJZAO010000376.1 Protein Homology CDS 3569 3820 . + 0 ID=cds-WP_011884576.1;Parent=gene-LDO50_RS29985;Dbxref=GenBank:WP_011884576.1;Name=WP_011884576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656684.1;locus_tag=LDO50_RS29985;product=hypothetical protein;protein_id=WP_011884576.1;transl_table=11 NZ_CAJZAO010000376.1 RefSeq gene 4029 4346 . - . ID=gene-LDO50_RS29990;Name=LDO50_RS29990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29990;old_locus_tag=BVI1335_940005 NZ_CAJZAO010000376.1 Protein Homology CDS 4029 4346 . - 0 ID=cds-WP_011884575.1;Parent=gene-LDO50_RS29990;Dbxref=GenBank:WP_011884575.1;Name=WP_011884575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332596.1;locus_tag=LDO50_RS29990;product=hypothetical protein;protein_id=WP_011884575.1;transl_table=11 NZ_CAJZAO010000376.1 RefSeq gene 4504 5220 . + . ID=gene-LDO50_RS29995;Name=LDO50_RS29995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS29995;old_locus_tag=BVI1335_940006 NZ_CAJZAO010000376.1 Protein Homology CDS 4504 5220 . + 0 ID=cds-WP_014722916.1;Parent=gene-LDO50_RS29995;Dbxref=GenBank:WP_014722916.1;Name=WP_014722916.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413752.1;locus_tag=LDO50_RS29995;product=YdcF family protein;protein_id=WP_014722916.1;transl_table=11 NZ_CAJZAO010000376.1 RefSeq gene 5440 5709 . + . ID=gene-LDO50_RS30000;Name=LDO50_RS30000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30000;old_locus_tag=BVI1335_940007 NZ_CAJZAO010000376.1 Protein Homology CDS 5440 5709 . + 0 ID=cds-WP_034195587.1;Parent=gene-LDO50_RS30000;Dbxref=GenBank:WP_034195587.1;Name=WP_034195587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521679.1;locus_tag=LDO50_RS30000;product=hypothetical protein;protein_id=WP_034195587.1;transl_table=11 NZ_CAJZAO010000376.1 RefSeq gene 5847 6104 . + . ID=gene-LDO50_RS30005;Name=LDO50_RS30005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30005;old_locus_tag=BVI1335_940008 NZ_CAJZAO010000376.1 Protein Homology CDS 5847 6104 . + 0 ID=cds-WP_011884572.1;Parent=gene-LDO50_RS30005;Dbxref=GenBank:WP_011884572.1;Name=WP_011884572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191628.1;locus_tag=LDO50_RS30005;product=hypothetical protein;protein_id=WP_011884572.1;transl_table=11 NZ_CAJZAO010000376.1 RefSeq gene 6673 7884 . - . ID=gene-LDO50_RS30010;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=LDO50_RS30010;old_locus_tag=BVI1335_940010 NZ_CAJZAO010000376.1 Protein Homology CDS 6673 7884 . - 0 ID=cds-WP_034195588.1;Parent=gene-LDO50_RS30010;Dbxref=GenBank:WP_034195588.1;Name=WP_034195588.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656681.1;locus_tag=LDO50_RS30010;product=outer membrane protein assembly factor BamC;protein_id=WP_034195588.1;transl_table=11 NZ_CAJZAO010000376.1 RefSeq gene 8933 9142 . + . ID=gene-LDO50_RS30015;Name=LDO50_RS30015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30015 NZ_CAJZAO010000376.1 GeneMarkS-2+ CDS 8933 9142 . + 0 ID=cds-WP_126220149.1;Parent=gene-LDO50_RS30015;Dbxref=GenBank:WP_126220149.1;Name=WP_126220149.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS30015;product=hypothetical protein;protein_id=WP_126220149.1;transl_table=11 NZ_CAJZAO010000376.1 RefSeq gene 9261 10958 . + . ID=gene-LDO50_RS30020;Name=LDO50_RS30020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30020;old_locus_tag=BVI1335_940012 NZ_CAJZAO010000376.1 Protein Homology CDS 9261 10958 . + 0 ID=cds-WP_224020503.1;Parent=gene-LDO50_RS30020;Dbxref=GenBank:WP_224020503.1;Name=WP_224020503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722913.1;locus_tag=LDO50_RS30020;product=arylsulfotransferase family protein;protein_id=WP_224020503.1;transl_table=11 NZ_CAJZAO010000376.1 RefSeq gene 11473 11549 . - . ID=gene-LDO50_RS30025;Name=LDO50_RS30025;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS30025;old_locus_tag=BVI1335_TRNA34 NZ_CAJZAO010000376.1 tRNAscan-SE tRNA 11473 11549 . - . ID=rna-LDO50_RS30025;Parent=gene-LDO50_RS30025;anticodon=(pos:complement(11513..11515));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS30025;product=tRNA-Pro NZ_CAJZAO010000376.1 tRNAscan-SE exon 11473 11549 . - . ID=exon-LDO50_RS30025-1;Parent=rna-LDO50_RS30025;anticodon=(pos:complement(11513..11515));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS30025;product=tRNA-Pro NZ_CAJZAO010000376.1 RefSeq gene 11644 12363 . - . ID=gene-LDO50_RS30030;Name=LDO50_RS30030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30030;old_locus_tag=BVI1335_940016 NZ_CAJZAO010000376.1 Protein Homology CDS 11644 12363 . - 0 ID=cds-WP_011884563.1;Parent=gene-LDO50_RS30030;Dbxref=GenBank:WP_011884563.1;Name=WP_011884563.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884563.1;locus_tag=LDO50_RS30030;product=class I SAM-dependent methyltransferase;protein_id=WP_011884563.1;transl_table=11 NZ_CAJZAO010000376.1 RefSeq gene 12686 14896 . + . ID=gene-LDO50_RS30035;Name=LDO50_RS30035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30035;old_locus_tag=BVI1335_940018 NZ_CAJZAO010000376.1 Protein Homology CDS 12686 14896 . + 0 ID=cds-WP_224020504.1;Parent=gene-LDO50_RS30035;Dbxref=GenBank:WP_224020504.1;Name=WP_224020504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363734.1;locus_tag=LDO50_RS30035;product=hypothetical protein;protein_id=WP_224020504.1;transl_table=11 NZ_CAJZAO010000376.1 RefSeq gene 14975 15388 . - . ID=gene-LDO50_RS30040;Name=LDO50_RS30040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30040;old_locus_tag=BVI1335_940019 NZ_CAJZAO010000376.1 Protein Homology CDS 14975 15388 . - 0 ID=cds-WP_011884559.1;Parent=gene-LDO50_RS30040;Dbxref=GenBank:WP_011884559.1;Name=WP_011884559.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526841.1;locus_tag=LDO50_RS30040;product=MerR family transcriptional regulator;protein_id=WP_011884559.1;transl_table=11 NZ_CAJZAO010000376.1 RefSeq gene 15450 15836 . - . ID=gene-LDO50_RS30045;Name=LDO50_RS30045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30045;old_locus_tag=BVI1335_940020 NZ_CAJZAO010000376.1 Protein Homology CDS 15450 15836 . - 0 ID=cds-WP_011884557.1;Parent=gene-LDO50_RS30045;Dbxref=GenBank:WP_011884557.1;Name=WP_011884557.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884557.1;locus_tag=LDO50_RS30045;product=integration host factor subunit alpha;protein_id=WP_011884557.1;transl_table=11 NZ_CAJZAO010000376.1 RefSeq gene 15909 18338 . - . ID=gene-LDO50_RS30050;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=LDO50_RS30050;old_locus_tag=BVI1335_940021 NZ_CAJZAO010000376.1 Protein Homology CDS 15909 18338 . - 0 ID=cds-WP_011884555.1;Parent=gene-LDO50_RS30050;Dbxref=GenBank:WP_011884555.1;Name=WP_011884555.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115709.1;locus_tag=LDO50_RS30050;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_011884555.1;transl_table=11 NZ_CAJZAO010000376.1 RefSeq gene 18434 19447 . - . ID=gene-LDO50_RS30055;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=LDO50_RS30055;old_locus_tag=BVI1335_940022 NZ_CAJZAO010000376.1 Protein Homology CDS 18434 19447 . - 0 ID=cds-WP_006753318.1;Parent=gene-LDO50_RS30055;Dbxref=GenBank:WP_006753318.1;Name=WP_006753318.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753318.1;locus_tag=LDO50_RS30055;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_006753318.1;transl_table=11 NZ_CAJZAO010000376.1 RefSeq gene 19596 19955 . - . ID=gene-LDO50_RS30060;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=LDO50_RS30060;old_locus_tag=BVI1335_940023 NZ_CAJZAO010000376.1 Protein Homology CDS 19596 19955 . - 0 ID=cds-WP_004192938.1;Parent=gene-LDO50_RS30060;Dbxref=GenBank:WP_004192938.1;Name=WP_004192938.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192938.1;locus_tag=LDO50_RS30060;product=50S ribosomal protein L20;protein_id=WP_004192938.1;transl_table=11 NZ_CAJZAO010000376.1 RefSeq gene 19986 20183 . - . ID=gene-LDO50_RS30065;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=LDO50_RS30065;old_locus_tag=BVI1335_940024 NZ_CAJZAO010000376.1 Protein Homology CDS 19986 20183 . - 0 ID=cds-WP_004191477.1;Parent=gene-LDO50_RS30065;Dbxref=GenBank:WP_004191477.1;Name=WP_004191477.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012433738.1;locus_tag=LDO50_RS30065;product=50S ribosomal protein L35;protein_id=WP_004191477.1;transl_table=11 NZ_CAJZAO010000376.1 RefSeq gene 20374 20898 . - . ID=gene-LDO50_RS30070;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=LDO50_RS30070;old_locus_tag=BVI1335_940025 NZ_CAJZAO010000376.1 Protein Homology CDS 20374 20898 . - 0 ID=cds-WP_072465527.1;Parent=gene-LDO50_RS30070;Dbxref=GenBank:WP_072465527.1;Name=WP_072465527.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012435921.1;locus_tag=LDO50_RS30070;product=translation initiation factor IF-3;protein_id=WP_072465527.1;transl_table=11 NZ_CAJZAO010000376.1 RefSeq gene 20948 22855 . - . ID=gene-LDO50_RS30075;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=LDO50_RS30075;old_locus_tag=BVI1335_940026 NZ_CAJZAO010000376.1 Protein Homology CDS 20948 22855 . - 0 ID=cds-WP_011884549.1;Parent=gene-LDO50_RS30075;Dbxref=GenBank:WP_011884549.1;Name=WP_011884549.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191232.1;locus_tag=LDO50_RS30075;product=threonine--tRNA ligase;protein_id=WP_011884549.1;transl_table=11 NZ_CAJZAO010000376.1 RefSeq gene 23127 23203 . - . ID=gene-LDO50_RS30080;Name=LDO50_RS30080;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS30080;old_locus_tag=BVI1335_TRNA33 NZ_CAJZAO010000376.1 tRNAscan-SE tRNA 23127 23203 . - . ID=rna-LDO50_RS30080;Parent=gene-LDO50_RS30080;anticodon=(pos:complement(23167..23169));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS30080;product=tRNA-Val NZ_CAJZAO010000376.1 tRNAscan-SE exon 23127 23203 . - . ID=exon-LDO50_RS30080-1;Parent=rna-LDO50_RS30080;anticodon=(pos:complement(23167..23169));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS30080;product=tRNA-Val NZ_CAJZAO010000376.1 RefSeq gene 23297 25531 . - . ID=gene-LDO50_RS30085;Name=LDO50_RS30085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30085;old_locus_tag=BVI1335_940027 NZ_CAJZAO010000376.1 Protein Homology CDS 23297 25531 . - 0 ID=cds-WP_224020505.1;Parent=gene-LDO50_RS30085;Dbxref=GenBank:WP_224020505.1;Name=WP_224020505.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402085.1;locus_tag=LDO50_RS30085;product=RelA/SpoT family protein;protein_id=WP_224020505.1;transl_table=11 NZ_CAJZAO010000376.1 RefSeq gene 25571 25924 . - . ID=gene-LDO50_RS30090;Name=LDO50_RS30090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30090;old_locus_tag=BVI1335_940028 NZ_CAJZAO010000376.1 Protein Homology CDS 25571 25924 . - 0 ID=cds-WP_011884545.1;Parent=gene-LDO50_RS30090;Dbxref=GenBank:WP_011884545.1;Name=WP_011884545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486103.1;locus_tag=LDO50_RS30090;product=RidA family protein;protein_id=WP_011884545.1;transl_table=11 NZ_CAJZAO010000376.1 RefSeq gene 26006 26902 . - . ID=gene-LDO50_RS30095;Name=LDO50_RS30095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30095;old_locus_tag=BVI1335_940029 NZ_CAJZAO010000376.1 Protein Homology CDS 26006 26902 . - 0 ID=cds-WP_059991013.1;Parent=gene-LDO50_RS30095;Dbxref=GenBank:WP_059991013.1;Name=WP_059991013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492553.1;locus_tag=LDO50_RS30095;product=alpha/beta fold hydrolase;protein_id=WP_059991013.1;transl_table=11 NZ_CAJZAO010000376.1 RefSeq gene 27027 27932 . - . ID=gene-LDO50_RS30100;Name=LDO50_RS30100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30100;old_locus_tag=BVI1335_940030 NZ_CAJZAO010000376.1 Protein Homology CDS 27027 27932 . - 0 ID=cds-WP_045579210.1;Parent=gene-LDO50_RS30100;Dbxref=GenBank:WP_045579210.1;Name=WP_045579210.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884541.1;locus_tag=LDO50_RS30100;product=LysR family transcriptional regulator;protein_id=WP_045579210.1;transl_table=11 ##sequence-region NZ_CAJZAO010000377.1 1 37472 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000377.1 RefSeq region 1 37472 . + . ID=NZ_CAJZAO010000377.1:1..37472;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_95 NZ_CAJZAO010000377.1 RefSeq gene 1 877 . - . ID=gene-LDO50_RS30105;Name=LDO50_RS30105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30105;partial=true;start_range=.,1 NZ_CAJZAO010000377.1 Protein Homology CDS 1 877 . - 0 ID=cds-WP_224020506.1;Parent=gene-LDO50_RS30105;Dbxref=GenBank:WP_224020506.1;Name=WP_224020506.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600828.1;locus_tag=LDO50_RS30105;partial=true;product=RluA family pseudouridine synthase;protein_id=WP_224020506.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 919 1743 . + . ID=gene-LDO50_RS30110;Name=LDO50_RS30110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30110;old_locus_tag=BVI1335_950002 NZ_CAJZAO010000377.1 Protein Homology CDS 919 1743 . + 0 ID=cds-WP_011884951.1;Parent=gene-LDO50_RS30110;Dbxref=GenBank:WP_011884951.1;Name=WP_011884951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026946.1;locus_tag=LDO50_RS30110;product=outer membrane protein assembly factor BamD;protein_id=WP_011884951.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 1825 4062 . - . ID=gene-LDO50_RS30115;Name=LDO50_RS30115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30115;old_locus_tag=BVI1335_950003 NZ_CAJZAO010000377.1 Protein Homology CDS 1825 4062 . - 0 ID=cds-WP_224020507.1;Parent=gene-LDO50_RS30115;Dbxref=GenBank:WP_224020507.1;Name=WP_224020507.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493492.1;locus_tag=LDO50_RS30115;product=ATP-dependent DNA helicase;protein_id=WP_224020507.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 4118 4333 . - . ID=gene-LDO50_RS30120;Name=LDO50_RS30120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30120;old_locus_tag=BVI1335_950004 NZ_CAJZAO010000377.1 Protein Homology CDS 4118 4333 . - 0 ID=cds-WP_224020508.1;Parent=gene-LDO50_RS30120;Dbxref=GenBank:WP_224020508.1;Name=WP_224020508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010103275.1;locus_tag=LDO50_RS30120;product=YdcH family protein;protein_id=WP_224020508.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 4411 5163 . - . ID=gene-LDO50_RS30125;Name=LDO50_RS30125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30125;old_locus_tag=BVI1335_950005 NZ_CAJZAO010000377.1 Protein Homology CDS 4411 5163 . - 0 ID=cds-WP_041493837.1;Parent=gene-LDO50_RS30125;Dbxref=GenBank:WP_041493837.1;Name=WP_041493837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478691.1;locus_tag=LDO50_RS30125;product=hypothetical protein;protein_id=WP_041493837.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 5324 7651 . + . ID=gene-LDO50_RS30130;Name=LDO50_RS30130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30130;old_locus_tag=BVI1335_950006 NZ_CAJZAO010000377.1 Protein Homology CDS 5324 7651 . + 0 ID=cds-WP_034195410.1;Parent=gene-LDO50_RS30130;Dbxref=GenBank:WP_034195410.1;Name=WP_034195410.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352249.1;locus_tag=LDO50_RS30130;product=Tex family protein;protein_id=WP_034195410.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 8040 9953 . - . ID=gene-LDO50_RS30135;Name=LDO50_RS30135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30135;old_locus_tag=BVI1335_950008 NZ_CAJZAO010000377.1 Protein Homology CDS 8040 9953 . - 0 ID=cds-WP_011884956.1;Parent=gene-LDO50_RS30135;Dbxref=GenBank:WP_011884956.1;Name=WP_011884956.1;Ontology_term=GO:0071805,GO:0015079,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transmembrane transport|0071805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478689.1;locus_tag=LDO50_RS30135;product=potassium transporter Kup;protein_id=WP_011884956.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 10250 10846 . - . ID=gene-LDO50_RS30140;Name=LDO50_RS30140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30140;old_locus_tag=BVI1335_950009 NZ_CAJZAO010000377.1 Protein Homology CDS 10250 10846 . - 0 ID=cds-WP_014723093.1;Parent=gene-LDO50_RS30140;Dbxref=GenBank:WP_014723093.1;Name=WP_014723093.1;Ontology_term=GO:0006144,GO:0106130;gbkey=CDS;go_function=purine phosphoribosyltransferase activity|0106130||IEA;go_process=purine nucleobase metabolic process|0006144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478688.1;locus_tag=LDO50_RS30140;product=phosphoribosyltransferase;protein_id=WP_014723093.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 10854 12200 . - . ID=gene-LDO50_RS30145;Name=LDO50_RS30145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30145;old_locus_tag=BVI1335_950010 NZ_CAJZAO010000377.1 Protein Homology CDS 10854 12200 . - 0 ID=cds-WP_011884958.1;Parent=gene-LDO50_RS30145;Dbxref=GenBank:WP_011884958.1;Name=WP_011884958.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193462.1;locus_tag=LDO50_RS30145;product=adenylosuccinate synthase;protein_id=WP_011884958.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 12314 13462 . - . ID=gene-LDO50_RS30150;Name=LDO50_RS30150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30150;old_locus_tag=BVI1335_950011 NZ_CAJZAO010000377.1 Protein Homology CDS 12314 13462 . - 0 ID=cds-WP_011884959.1;Parent=gene-LDO50_RS30150;Dbxref=GenBank:WP_011884959.1;Name=WP_011884959.1;Ontology_term=GO:0000105;gbkey=CDS;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192327.1;locus_tag=LDO50_RS30150;product=ATP phosphoribosyltransferase regulatory subunit;protein_id=WP_011884959.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 13569 13760 . - . ID=gene-LDO50_RS30155;Name=LDO50_RS30155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30155;old_locus_tag=BVI1335_950012 NZ_CAJZAO010000377.1 Protein Homology CDS 13569 13760 . - 0 ID=cds-WP_011884960.1;Parent=gene-LDO50_RS30155;Dbxref=GenBank:WP_011884960.1;Name=WP_011884960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009973312.1;locus_tag=LDO50_RS30155;product=DUF2065 domain-containing protein;protein_id=WP_011884960.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 13799 14698 . - . ID=gene-LDO50_RS30160;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=LDO50_RS30160;old_locus_tag=BVI1335_950013 NZ_CAJZAO010000377.1 Protein Homology CDS 13799 14698 . - 0 ID=cds-WP_059460792.1;Parent=gene-LDO50_RS30160;Dbxref=GenBank:WP_059460792.1;Name=WP_059460792.1;Ontology_term=GO:0052547,GO:0016020,GO:0098797;gbkey=CDS;gene=hflC;go_component=membrane|0016020||IEA,plasma membrane protein complex|0098797||IEA;go_process=regulation of peptidase activity|0052547||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896916.1;locus_tag=LDO50_RS30160;product=protease modulator HflC;protein_id=WP_059460792.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 14713 16074 . - . ID=gene-LDO50_RS30165;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=LDO50_RS30165;old_locus_tag=BVI1335_950014 NZ_CAJZAO010000377.1 Protein Homology CDS 14713 16074 . - 0 ID=cds-WP_011884962.1;Parent=gene-LDO50_RS30165;Dbxref=GenBank:WP_011884962.1;Name=WP_011884962.1;Ontology_term=GO:0045861,GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;go_process=negative regulation of proteolysis|0045861||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404714.1;locus_tag=LDO50_RS30165;product=FtsH protease activity modulator HflK;protein_id=WP_011884962.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 16122 17297 . - . ID=gene-LDO50_RS30170;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=LDO50_RS30170;old_locus_tag=BVI1335_950015 NZ_CAJZAO010000377.1 Protein Homology CDS 16122 17297 . - 0 ID=cds-WP_174479794.1;Parent=gene-LDO50_RS30170;Dbxref=GenBank:WP_174479794.1;Name=WP_174479794.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521337.1;locus_tag=LDO50_RS30170;product=GTPase HflX;protein_id=WP_174479794.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 17370 17609 . - . ID=gene-LDO50_RS30175;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=LDO50_RS30175;old_locus_tag=BVI1335_950016 NZ_CAJZAO010000377.1 Protein Homology CDS 17370 17609 . - 0 ID=cds-WP_006399927.1;Parent=gene-LDO50_RS30175;Dbxref=GenBank:WP_006399927.1;Name=WP_006399927.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399927.1;locus_tag=LDO50_RS30175;product=RNA chaperone Hfq;protein_id=WP_006399927.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 17763 19100 . - . ID=gene-LDO50_RS30180;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=LDO50_RS30180;old_locus_tag=BVI1335_950017 NZ_CAJZAO010000377.1 Protein Homology CDS 17763 19100 . - 0 ID=cds-WP_011884964.1;Parent=gene-LDO50_RS30180;Dbxref=GenBank:WP_011884964.1;Name=WP_011884964.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006051314.1;locus_tag=LDO50_RS30180;product=ribosome biogenesis GTPase Der;protein_id=WP_011884964.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 19350 20495 . - . ID=gene-LDO50_RS30185;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=LDO50_RS30185;old_locus_tag=BVI1335_950018 NZ_CAJZAO010000377.1 Protein Homology CDS 19350 20495 . - 0 ID=cds-WP_011884965.1;Parent=gene-LDO50_RS30185;Dbxref=GenBank:WP_011884965.1;Name=WP_011884965.1;Ontology_term=GO:0005515,GO:0009279;gbkey=CDS;gene=bamB;go_component=cell outer membrane|0009279||IEA;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875493.1;locus_tag=LDO50_RS30185;product=outer membrane protein assembly factor BamB;protein_id=WP_011884965.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 20536 21165 . - . ID=gene-LDO50_RS30190;Name=LDO50_RS30190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30190;old_locus_tag=BVI1335_950019 NZ_CAJZAO010000377.1 Protein Homology CDS 20536 21165 . - 0 ID=cds-WP_011884966.1;Parent=gene-LDO50_RS30190;Dbxref=GenBank:WP_011884966.1;Name=WP_011884966.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890825.1;locus_tag=LDO50_RS30190;product=tetratricopeptide repeat protein;protein_id=WP_011884966.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 21221 22561 . - . ID=gene-LDO50_RS30195;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=LDO50_RS30195;old_locus_tag=BVI1335_950020 NZ_CAJZAO010000377.1 Protein Homology CDS 21221 22561 . - 0 ID=cds-WP_011884967.1;Parent=gene-LDO50_RS30195;Dbxref=GenBank:WP_011884967.1;Name=WP_011884967.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764216.1;locus_tag=LDO50_RS30195;product=histidine--tRNA ligase;protein_id=WP_011884967.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 22586 23884 . - . ID=gene-LDO50_RS30200;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=LDO50_RS30200;old_locus_tag=BVI1335_950021 NZ_CAJZAO010000377.1 Protein Homology CDS 22586 23884 . - 0 ID=cds-WP_034195407.1;Parent=gene-LDO50_RS30200;Dbxref=GenBank:WP_034195407.1;Name=WP_034195407.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483314.1;locus_tag=LDO50_RS30200;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_034195407.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 23989 25005 . - . ID=gene-LDO50_RS30205;Name=LDO50_RS30205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30205;old_locus_tag=BVI1335_950022 NZ_CAJZAO010000377.1 Protein Homology CDS 23989 25005 . - 0 ID=cds-WP_175984117.1;Parent=gene-LDO50_RS30205;Dbxref=GenBank:WP_175984117.1;Name=WP_175984117.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496411.1;locus_tag=LDO50_RS30205;product=helix-turn-helix domain-containing protein;protein_id=WP_175984117.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 25168 26307 . - . ID=gene-LDO50_RS30210;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=LDO50_RS30210;old_locus_tag=BVI1335_950023 NZ_CAJZAO010000377.1 Protein Homology CDS 25168 26307 . - 0 ID=cds-WP_034195406.1;Parent=gene-LDO50_RS30210;Dbxref=GenBank:WP_034195406.1;Name=WP_034195406.1;Ontology_term=GO:0030488,GO:0070475,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=tRNA methylation|0030488||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012433532.1;locus_tag=LDO50_RS30210;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_034195406.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 26363 26788 . - . ID=gene-LDO50_RS30215;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=LDO50_RS30215;old_locus_tag=BVI1335_950024 NZ_CAJZAO010000377.1 Protein Homology CDS 26363 26788 . - 0 ID=cds-WP_006478674.1;Parent=gene-LDO50_RS30215;Dbxref=GenBank:WP_006478674.1;Name=WP_006478674.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012433533.1;locus_tag=LDO50_RS30215;product=nucleoside-diphosphate kinase;protein_id=WP_006478674.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 27039 27737 . + . ID=gene-LDO50_RS30220;Name=LDO50_RS30220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30220;old_locus_tag=BVI1335_950025 NZ_CAJZAO010000377.1 Protein Homology CDS 27039 27737 . + 0 ID=cds-WP_011884971.1;Parent=gene-LDO50_RS30220;Dbxref=GenBank:WP_011884971.1;Name=WP_011884971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698250.1;locus_tag=LDO50_RS30220;product=Bax inhibitor-1/YccA family protein;protein_id=WP_011884971.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 27801 29105 . - . ID=gene-LDO50_RS30225;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=LDO50_RS30225;old_locus_tag=BVI1335_950026 NZ_CAJZAO010000377.1 Protein Homology CDS 27801 29105 . - 0 ID=cds-WP_034195427.1;Parent=gene-LDO50_RS30225;Dbxref=GenBank:WP_034195427.1;Name=WP_034195427.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723103.1;locus_tag=LDO50_RS30225;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_034195427.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 29366 30220 . + . ID=gene-LDO50_RS30230;Name=LDO50_RS30230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30230;old_locus_tag=BVI1335_950027 NZ_CAJZAO010000377.1 Protein Homology CDS 29366 30220 . + 0 ID=cds-WP_045579056.1;Parent=gene-LDO50_RS30230;Dbxref=GenBank:WP_045579056.1;Name=WP_045579056.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723104.1;locus_tag=LDO50_RS30230;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_045579056.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 30260 31036 . - . ID=gene-LDO50_RS30235;Name=LDO50_RS30235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30235;old_locus_tag=BVI1335_950028 NZ_CAJZAO010000377.1 Protein Homology CDS 30260 31036 . - 0 ID=cds-WP_011884974.1;Parent=gene-LDO50_RS30235;Dbxref=GenBank:WP_011884974.1;Name=WP_011884974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851735.1;locus_tag=LDO50_RS30235;product=3'-5' exonuclease;protein_id=WP_011884974.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 31040 32125 . - . ID=gene-LDO50_RS30240;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=LDO50_RS30240;old_locus_tag=BVI1335_950029 NZ_CAJZAO010000377.1 Protein Homology CDS 31040 32125 . - 0 ID=cds-WP_011884975.1;Parent=gene-LDO50_RS30240;Dbxref=GenBank:WP_011884975.1;Name=WP_011884975.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193640.1;locus_tag=LDO50_RS30240;product=RNA polymerase sigma factor RpoS;protein_id=WP_011884975.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 32137 33018 . - . ID=gene-LDO50_RS30245;Name=LDO50_RS30245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30245;old_locus_tag=BVI1335_950030 NZ_CAJZAO010000377.1 Protein Homology CDS 32137 33018 . - 0 ID=cds-WP_059456776.1;Parent=gene-LDO50_RS30245;Dbxref=GenBank:WP_059456776.1;Name=WP_059456776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478669.1;locus_tag=LDO50_RS30245;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_059456776.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 33024 33953 . - . ID=gene-LDO50_RS30250;Name=LDO50_RS30250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30250;old_locus_tag=BVI1335_950031 NZ_CAJZAO010000377.1 Protein Homology CDS 33024 33953 . - 0 ID=cds-WP_011884977.1;Parent=gene-LDO50_RS30250;Dbxref=GenBank:WP_011884977.1;Name=WP_011884977.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352272.1;locus_tag=LDO50_RS30250;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_011884977.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 33950 34711 . - . ID=gene-LDO50_RS30255;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=LDO50_RS30255;old_locus_tag=BVI1335_950032 NZ_CAJZAO010000377.1 Protein Homology CDS 33950 34711 . - 0 ID=cds-WP_011884978.1;Parent=gene-LDO50_RS30255;Dbxref=GenBank:WP_011884978.1;Name=WP_011884978.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011488250.1;locus_tag=LDO50_RS30255;product=5'/3'-nucleotidase SurE;protein_id=WP_011884978.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 34967 36172 . - . ID=gene-LDO50_RS30260;Name=LDO50_RS30260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30260;old_locus_tag=BVI1335_950033 NZ_CAJZAO010000377.1 Protein Homology CDS 34967 36172 . - 0 ID=cds-WP_176315169.1;Parent=gene-LDO50_RS30260;Dbxref=GenBank:WP_176315169.1;Name=WP_176315169.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191282.1;locus_tag=LDO50_RS30260;product=CaiB/BaiF CoA transferase family protein;protein_id=WP_176315169.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 36221 36817 . - . ID=gene-LDO50_RS30265;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=LDO50_RS30265;old_locus_tag=BVI1335_950034 NZ_CAJZAO010000377.1 Protein Homology CDS 36221 36817 . - 0 ID=cds-WP_011884980.1;Parent=gene-LDO50_RS30265;Dbxref=GenBank:WP_011884980.1;Name=WP_011884980.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875477.1;locus_tag=LDO50_RS30265;product=recombination mediator RecR;protein_id=WP_011884980.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq gene 36858 37184 . - . ID=gene-LDO50_RS30270;Name=LDO50_RS30270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30270;old_locus_tag=BVI1335_950035 NZ_CAJZAO010000377.1 Protein Homology CDS 36858 37184 . - 0 ID=cds-WP_006755698.1;Parent=gene-LDO50_RS30270;Dbxref=GenBank:WP_006755698.1;Name=WP_006755698.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006048866.1;locus_tag=LDO50_RS30270;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_006755698.1;transl_table=11 NZ_CAJZAO010000377.1 RefSeq pseudogene 37299 37472 . - . ID=gene-LDO50_RS30275;Name=LDO50_RS30275;end_range=37472,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS30275;partial=true;pseudo=true NZ_CAJZAO010000377.1 Protein Homology CDS 37299 37472 . - 0 ID=cds-LDO50_RS30275;Parent=gene-LDO50_RS30275;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=37472,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549680.1;locus_tag=LDO50_RS30275;partial=true;product=DNA polymerase III subunit gamma/tau C-terminal domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000378.1 1 29231 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000378.1 RefSeq region 1 29231 . + . ID=NZ_CAJZAO010000378.1:1..29231;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_96 NZ_CAJZAO010000378.1 RefSeq gene 356 535 . - . ID=gene-LDO50_RS30280;Name=LDO50_RS30280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30280;old_locus_tag=BVI1335_960002 NZ_CAJZAO010000378.1 Protein Homology CDS 356 535 . - 0 ID=cds-WP_011881902.1;Parent=gene-LDO50_RS30280;Dbxref=GenBank:WP_011881902.1;Name=WP_011881902.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881902.1;locus_tag=LDO50_RS30280;product=Flp family type IVb pilin;protein_id=WP_011881902.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 1169 1576 . + . ID=gene-LDO50_RS30285;Name=LDO50_RS30285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30285;old_locus_tag=BVI1335_960003 NZ_CAJZAO010000378.1 Protein Homology CDS 1169 1576 . + 0 ID=cds-WP_059734779.1;Parent=gene-LDO50_RS30285;Dbxref=GenBank:WP_059734779.1;Name=WP_059734779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758237.1;locus_tag=LDO50_RS30285;product=DUF427 domain-containing protein;protein_id=WP_059734779.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 1771 2772 . + . ID=gene-LDO50_RS30290;Name=LDO50_RS30290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30290;old_locus_tag=BVI1335_960004 NZ_CAJZAO010000378.1 Protein Homology CDS 1771 2772 . + 0 ID=cds-WP_011881900.1;Parent=gene-LDO50_RS30290;Dbxref=GenBank:WP_011881900.1;Name=WP_011881900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881900.1;locus_tag=LDO50_RS30290;product=sulfonate ABC transporter substrate-binding protein;protein_id=WP_011881900.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 2791 3378 . - . ID=gene-LDO50_RS30295;Name=LDO50_RS30295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30295;old_locus_tag=BVI1335_960005 NZ_CAJZAO010000378.1 Protein Homology CDS 2791 3378 . - 0 ID=cds-WP_043292427.1;Parent=gene-LDO50_RS30295;Dbxref=GenBank:WP_043292427.1;Name=WP_043292427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725144.1;locus_tag=LDO50_RS30295;product=putative glycolipid-binding domain-containing protein;protein_id=WP_043292427.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 3414 4571 . - . ID=gene-LDO50_RS30300;Name=LDO50_RS30300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30300;old_locus_tag=BVI1335_960006 NZ_CAJZAO010000378.1 Protein Homology CDS 3414 4571 . - 0 ID=cds-WP_011881898.1;Parent=gene-LDO50_RS30300;Dbxref=GenBank:WP_011881898.1;Name=WP_011881898.1;Ontology_term=GO:0030554,GO:0046872;gbkey=CDS;go_function=adenyl nucleotide binding|0030554||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725145.1;locus_tag=LDO50_RS30300;product=iron-containing alcohol dehydrogenase;protein_id=WP_011881898.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 4568 4903 . - . ID=gene-LDO50_RS30305;Name=LDO50_RS30305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30305;old_locus_tag=BVI1335_960007 NZ_CAJZAO010000378.1 Protein Homology CDS 4568 4903 . - 0 ID=cds-WP_011881897.1;Parent=gene-LDO50_RS30305;Dbxref=GenBank:WP_011881897.1;Name=WP_011881897.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658438.1;locus_tag=LDO50_RS30305;product=putative quinol monooxygenase;protein_id=WP_011881897.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 5012 5728 . - . ID=gene-LDO50_RS30310;Name=LDO50_RS30310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30310;old_locus_tag=BVI1335_960008 NZ_CAJZAO010000378.1 Protein Homology CDS 5012 5728 . - 0 ID=cds-WP_059622840.1;Parent=gene-LDO50_RS30310;Dbxref=GenBank:WP_059622840.1;Name=WP_059622840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758232.1;locus_tag=LDO50_RS30310;product=SDR family oxidoreductase;protein_id=WP_059622840.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 5861 6811 . + . ID=gene-LDO50_RS30315;Name=LDO50_RS30315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30315;old_locus_tag=BVI1335_960009 NZ_CAJZAO010000378.1 Protein Homology CDS 5861 6811 . + 0 ID=cds-WP_011881895.1;Parent=gene-LDO50_RS30315;Dbxref=GenBank:WP_011881895.1;Name=WP_011881895.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881895.1;locus_tag=LDO50_RS30315;product=LysR family transcriptional regulator;protein_id=WP_011881895.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 6967 8355 . + . ID=gene-LDO50_RS30320;Name=LDO50_RS30320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30320;old_locus_tag=BVI1335_960010 NZ_CAJZAO010000378.1 Protein Homology CDS 6967 8355 . + 0 ID=cds-WP_011881894.1;Parent=gene-LDO50_RS30320;Dbxref=GenBank:WP_011881894.1;Name=WP_011881894.1;Ontology_term=GO:0015851,GO:0015205,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554516.1;locus_tag=LDO50_RS30320;product=nucleobase:cation symporter-2 family protein;protein_id=WP_011881894.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 8453 8872 . + . ID=gene-LDO50_RS30325;Name=LDO50_RS30325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30325;old_locus_tag=BVI1335_960011 NZ_CAJZAO010000378.1 Protein Homology CDS 8453 8872 . + 0 ID=cds-WP_011881893.1;Parent=gene-LDO50_RS30325;Dbxref=GenBank:WP_011881893.1;Name=WP_011881893.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881893.1;locus_tag=LDO50_RS30325;product=NUDIX hydrolase;protein_id=WP_011881893.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 8958 9260 . + . ID=gene-LDO50_RS30330;Name=LDO50_RS30330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30330;old_locus_tag=BVI1335_960012 NZ_CAJZAO010000378.1 Protein Homology CDS 8958 9260 . + 0 ID=cds-WP_011881892.1;Parent=gene-LDO50_RS30330;Dbxref=GenBank:WP_011881892.1;Name=WP_011881892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658433.1;locus_tag=LDO50_RS30330;product=hypothetical protein;protein_id=WP_011881892.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 9271 9483 . - . ID=gene-LDO50_RS30335;Name=LDO50_RS30335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30335;old_locus_tag=BVI1335_960013 NZ_CAJZAO010000378.1 Protein Homology CDS 9271 9483 . - 0 ID=cds-WP_014725152.1;Parent=gene-LDO50_RS30335;Dbxref=GenBank:WP_014725152.1;Name=WP_014725152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899787.1;locus_tag=LDO50_RS30335;product=hypothetical protein;protein_id=WP_014725152.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 9845 11011 . + . ID=gene-LDO50_RS30340;Name=LDO50_RS30340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30340;old_locus_tag=BVI1335_960014 NZ_CAJZAO010000378.1 Protein Homology CDS 9845 11011 . + 0 ID=cds-WP_011881890.1;Parent=gene-LDO50_RS30340;Dbxref=GenBank:WP_011881890.1;Name=WP_011881890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881890.1;locus_tag=LDO50_RS30340;product=DUF4382 domain-containing protein;protein_id=WP_011881890.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 11071 11232 . + . ID=gene-LDO50_RS30345;Name=LDO50_RS30345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30345;old_locus_tag=BVI1335_960015 NZ_CAJZAO010000378.1 Protein Homology CDS 11071 11232 . + 0 ID=cds-WP_011881889.1;Parent=gene-LDO50_RS30345;Dbxref=GenBank:WP_011881889.1;Name=WP_011881889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533510.1;locus_tag=LDO50_RS30345;product=hypothetical protein;protein_id=WP_011881889.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 11804 13753 . + . ID=gene-LDO50_RS30350;Name=LDO50_RS30350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30350;old_locus_tag=BVI1335_960016 NZ_CAJZAO010000378.1 Protein Homology CDS 11804 13753 . + 0 ID=cds-WP_011881888.1;Parent=gene-LDO50_RS30350;Dbxref=GenBank:WP_011881888.1;Name=WP_011881888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881888.1;locus_tag=LDO50_RS30350;product=hypothetical protein;protein_id=WP_011881888.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 13812 14549 . - . ID=gene-LDO50_RS30355;Name=LDO50_RS30355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30355;old_locus_tag=BVI1335_960017 NZ_CAJZAO010000378.1 Protein Homology CDS 13812 14549 . - 0 ID=cds-WP_011881887.1;Parent=gene-LDO50_RS30355;Dbxref=GenBank:WP_011881887.1;Name=WP_011881887.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881887.1;locus_tag=LDO50_RS30355;product=winged helix-turn-helix domain-containing protein;protein_id=WP_011881887.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 14647 15384 . - . ID=gene-LDO50_RS30360;Name=LDO50_RS30360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30360;old_locus_tag=BVI1335_960018 NZ_CAJZAO010000378.1 Protein Homology CDS 14647 15384 . - 0 ID=cds-WP_176300410.1;Parent=gene-LDO50_RS30360;Dbxref=GenBank:WP_176300410.1;Name=WP_176300410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881886.1;locus_tag=LDO50_RS30360;product=TenA family transcriptional regulator;protein_id=WP_176300410.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 15402 17801 . - . ID=gene-LDO50_RS30365;Name=LDO50_RS30365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30365;old_locus_tag=BVI1335_960019 NZ_CAJZAO010000378.1 Protein Homology CDS 15402 17801 . - 0 ID=cds-WP_034193789.1;Parent=gene-LDO50_RS30365;Dbxref=GenBank:WP_034193789.1;Name=WP_034193789.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881885.1;locus_tag=LDO50_RS30365;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_034193789.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 17968 18732 . - . ID=gene-LDO50_RS30370;Name=LDO50_RS30370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30370;old_locus_tag=BVI1335_960020 NZ_CAJZAO010000378.1 Protein Homology CDS 17968 18732 . - 0 ID=cds-WP_011881884.1;Parent=gene-LDO50_RS30370;Dbxref=GenBank:WP_011881884.1;Name=WP_011881884.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881884.1;locus_tag=LDO50_RS30370;product=Crp/Fnr family transcriptional regulator;protein_id=WP_011881884.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 19334 20155 . - . ID=gene-LDO50_RS30375;Name=LDO50_RS30375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30375;old_locus_tag=BVI1335_960022 NZ_CAJZAO010000378.1 Protein Homology CDS 19334 20155 . - 0 ID=cds-WP_011881883.1;Parent=gene-LDO50_RS30375;Dbxref=GenBank:WP_011881883.1;Name=WP_011881883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725157.1;locus_tag=LDO50_RS30375;product=alpha/beta fold hydrolase;protein_id=WP_011881883.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 20259 21140 . - . ID=gene-LDO50_RS30380;Name=LDO50_RS30380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30380;old_locus_tag=BVI1335_960023 NZ_CAJZAO010000378.1 Protein Homology CDS 20259 21140 . - 0 ID=cds-WP_059461514.1;Parent=gene-LDO50_RS30380;Dbxref=GenBank:WP_059461514.1;Name=WP_059461514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881882.1;locus_tag=LDO50_RS30380;product=alpha/beta fold hydrolase;protein_id=WP_059461514.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 21192 22205 . - . ID=gene-LDO50_RS30385;Name=LDO50_RS30385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30385;old_locus_tag=BVI1335_960024 NZ_CAJZAO010000378.1 Protein Homology CDS 21192 22205 . - 0 ID=cds-WP_176321479.1;Parent=gene-LDO50_RS30385;Dbxref=GenBank:WP_176321479.1;Name=WP_176321479.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881881.1;locus_tag=LDO50_RS30385;product=MBL fold metallo-hydrolase;protein_id=WP_176321479.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 22601 23545 . - . ID=gene-LDO50_RS30390;Name=LDO50_RS30390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30390;old_locus_tag=BVI1335_960025 NZ_CAJZAO010000378.1 Protein Homology CDS 22601 23545 . - 0 ID=cds-WP_011881880.1;Parent=gene-LDO50_RS30390;Dbxref=GenBank:WP_011881880.1;Name=WP_011881880.1;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881880.1;locus_tag=LDO50_RS30390;product=3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein;protein_id=WP_011881880.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 23789 24673 . + . ID=gene-LDO50_RS30395;Name=LDO50_RS30395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30395;old_locus_tag=BVI1335_960026 NZ_CAJZAO010000378.1 Protein Homology CDS 23789 24673 . + 0 ID=cds-WP_011881879.1;Parent=gene-LDO50_RS30395;Dbxref=GenBank:WP_011881879.1;Name=WP_011881879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881879.1;locus_tag=LDO50_RS30395;product=LysR substrate-binding domain-containing protein;protein_id=WP_011881879.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 25007 25801 . + . ID=gene-LDO50_RS30400;Name=LDO50_RS30400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30400;old_locus_tag=BVI1335_960028 NZ_CAJZAO010000378.1 Protein Homology CDS 25007 25801 . + 0 ID=cds-WP_011881878.1;Parent=gene-LDO50_RS30400;Dbxref=GenBank:WP_011881878.1;Name=WP_011881878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881878.1;locus_tag=LDO50_RS30400;product=acetoacetate decarboxylase;protein_id=WP_011881878.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 25939 26838 . + . ID=gene-LDO50_RS30405;Name=LDO50_RS30405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30405;old_locus_tag=BVI1335_960027 NZ_CAJZAO010000378.1 Protein Homology CDS 25939 26838 . + 0 ID=cds-WP_014725162.1;Parent=gene-LDO50_RS30405;Dbxref=GenBank:WP_014725162.1;Name=WP_014725162.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881877.1;locus_tag=LDO50_RS30405;product=LysR family transcriptional regulator;protein_id=WP_014725162.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 27007 27939 . + . ID=gene-LDO50_RS30410;Name=LDO50_RS30410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30410;old_locus_tag=BVI1335_960029 NZ_CAJZAO010000378.1 Protein Homology CDS 27007 27939 . + 0 ID=cds-WP_224020509.1;Parent=gene-LDO50_RS30410;Dbxref=GenBank:WP_224020509.1;Name=WP_224020509.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725163.1;locus_tag=LDO50_RS30410;product=LysR family transcriptional regulator;protein_id=WP_224020509.1;transl_table=11 NZ_CAJZAO010000378.1 RefSeq gene 27956 29098 . - . ID=gene-LDO50_RS30415;Name=LDO50_RS30415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30415;old_locus_tag=BVI1335_960030 NZ_CAJZAO010000378.1 Protein Homology CDS 27956 29098 . - 0 ID=cds-WP_176316958.1;Parent=gene-LDO50_RS30415;Dbxref=GenBank:WP_176316958.1;Name=WP_176316958.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725164.1;locus_tag=LDO50_RS30415;product=AraC family transcriptional regulator;protein_id=WP_176316958.1;transl_table=11 ##sequence-region NZ_CAJZAO010000379.1 1 14253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000379.1 RefSeq region 1 14253 . + . ID=NZ_CAJZAO010000379.1:1..14253;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_97 NZ_CAJZAO010000379.1 RefSeq gene 1 179 . - . ID=gene-LDO50_RS30420;Name=LDO50_RS30420;end_range=179,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30420;partial=true;start_range=.,1 NZ_CAJZAO010000379.1 Protein Homology CDS 1 179 . - 0 ID=cds-WP_443797885.1;Parent=gene-LDO50_RS30420;Dbxref=GenBank:WP_443797885.1;Name=WP_443797885.1;Ontology_term=GO:0019605,GO:0047989,GO:0005615;end_range=179,.;gbkey=CDS;go_component=extracellular space|0005615||IEA;go_function=hydroxybutyrate-dimer hydrolase activity|0047989||IEA;go_process=butyrate metabolic process|0019605||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883475.1;locus_tag=LDO50_RS30420;partial=true;product=3-hydroxybutyrate oligomer hydrolase family protein;protein_id=WP_443797885.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000379.1 RefSeq gene 391 747 . - . ID=gene-LDO50_RS30425;Name=LDO50_RS30425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30425;old_locus_tag=BVI1335_970002 NZ_CAJZAO010000379.1 Protein Homology CDS 391 747 . - 0 ID=cds-WP_011883473.1;Parent=gene-LDO50_RS30425;Dbxref=GenBank:WP_011883473.1;Name=WP_011883473.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759602.1;locus_tag=LDO50_RS30425;product=BON domain-containing protein;protein_id=WP_011883473.1;transl_table=11 NZ_CAJZAO010000379.1 RefSeq gene 1215 2648 . + . ID=gene-LDO50_RS30430;Name=LDO50_RS30430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30430;old_locus_tag=BVI1335_970004 NZ_CAJZAO010000379.1 Protein Homology CDS 1215 2648 . + 0 ID=cds-WP_011883471.1;Parent=gene-LDO50_RS30430;Dbxref=GenBank:WP_011883471.1;Name=WP_011883471.1;Ontology_term=GO:0055085,GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351112.1;locus_tag=LDO50_RS30430;product=TAXI family TRAP transporter solute-binding subunit;protein_id=WP_011883471.1;transl_table=11 NZ_CAJZAO010000379.1 RefSeq gene 2743 3381 . + . ID=gene-LDO50_RS30435;Name=LDO50_RS30435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30435;old_locus_tag=BVI1335_970005 NZ_CAJZAO010000379.1 Protein Homology CDS 2743 3381 . + 0 ID=cds-WP_011883469.1;Parent=gene-LDO50_RS30435;Dbxref=GenBank:WP_011883469.1;Name=WP_011883469.1;Ontology_term=GO:1901170,GO:0018845,GO:0043295;gbkey=CDS;go_function=2-hydroxychromene-2-carboxylate isomerase activity|0018845||IEA,glutathione binding|0043295||IEA;go_process=naphthalene catabolic process|1901170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601123.1;locus_tag=LDO50_RS30435;product=2-hydroxychromene-2-carboxylate isomerase;protein_id=WP_011883469.1;transl_table=11 NZ_CAJZAO010000379.1 RefSeq gene 3451 4395 . + . ID=gene-LDO50_RS30440;Name=LDO50_RS30440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30440;old_locus_tag=BVI1335_970006 NZ_CAJZAO010000379.1 Protein Homology CDS 3451 4395 . + 0 ID=cds-WP_060082271.1;Parent=gene-LDO50_RS30440;Dbxref=GenBank:WP_060082271.1;Name=WP_060082271.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476764.1;locus_tag=LDO50_RS30440;product=LysR family transcriptional regulator;protein_id=WP_060082271.1;transl_table=11 NZ_CAJZAO010000379.1 RefSeq gene 4436 4837 . - . ID=gene-LDO50_RS30445;Name=LDO50_RS30445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30445;old_locus_tag=BVI1335_970007 NZ_CAJZAO010000379.1 Protein Homology CDS 4436 4837 . - 0 ID=cds-WP_011883465.1;Parent=gene-LDO50_RS30445;Dbxref=GenBank:WP_011883465.1;Name=WP_011883465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656100.1;locus_tag=LDO50_RS30445;product=polyketide cyclase;protein_id=WP_011883465.1;transl_table=11 NZ_CAJZAO010000379.1 RefSeq gene 4967 5386 . - . ID=gene-LDO50_RS30450;Name=LDO50_RS30450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30450;old_locus_tag=BVI1335_970008 NZ_CAJZAO010000379.1 Protein Homology CDS 4967 5386 . - 0 ID=cds-WP_011883463.1;Parent=gene-LDO50_RS30450;Dbxref=GenBank:WP_011883463.1;Name=WP_011883463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883463.1;locus_tag=LDO50_RS30450;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_011883463.1;transl_table=11 NZ_CAJZAO010000379.1 RefSeq gene 5373 5606 . - . ID=gene-LDO50_RS30455;Name=LDO50_RS30455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30455;old_locus_tag=BVI1335_970009 NZ_CAJZAO010000379.1 Protein Homology CDS 5373 5606 . - 0 ID=cds-WP_011883461.1;Parent=gene-LDO50_RS30455;Dbxref=GenBank:WP_011883461.1;Name=WP_011883461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883461.1;locus_tag=LDO50_RS30455;product=FitA-like ribbon-helix-helix domain-containing protein;protein_id=WP_011883461.1;transl_table=11 NZ_CAJZAO010000379.1 RefSeq gene 5933 6589 . - . ID=gene-LDO50_RS30460;Name=xdhC;gbkey=Gene;gene=xdhC;gene_biotype=protein_coding;locus_tag=LDO50_RS30460;old_locus_tag=BVI1335_970011 NZ_CAJZAO010000379.1 Protein Homology CDS 5933 6589 . - 0 ID=cds-WP_059669209.1;Parent=gene-LDO50_RS30460;Dbxref=GenBank:WP_059669209.1;Name=WP_059669209.1;Ontology_term=GO:0009115,GO:0065003,GO:0043546;gbkey=CDS;gene=xdhC;go_function=molybdopterin cofactor binding|0043546||IEA;go_process=xanthine catabolic process|0009115||IEA,protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883460.1;locus_tag=LDO50_RS30460;product=xanthine dehydrogenase accessory protein XdhC;protein_id=WP_059669209.1;transl_table=11 NZ_CAJZAO010000379.1 RefSeq gene 6677 9049 . - . ID=gene-LDO50_RS30465;Name=xdhB;gbkey=Gene;gene=xdhB;gene_biotype=protein_coding;locus_tag=LDO50_RS30465;old_locus_tag=BVI1335_970012 NZ_CAJZAO010000379.1 Protein Homology CDS 6677 9049 . - 0 ID=cds-WP_059888615.1;Parent=gene-LDO50_RS30465;Dbxref=GenBank:WP_059888615.1;Name=WP_059888615.1;Ontology_term=GO:0009115,GO:0004854,GO:0030151;gbkey=CDS;gene=xdhB;go_function=xanthine dehydrogenase activity|0004854||IEA,molybdenum ion binding|0030151||IEA;go_process=xanthine catabolic process|0009115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883458.1;locus_tag=LDO50_RS30465;product=xanthine dehydrogenase molybdopterin binding subunit;protein_id=WP_059888615.1;transl_table=11 NZ_CAJZAO010000379.1 RefSeq gene 9068 10666 . - . ID=gene-LDO50_RS30470;Name=xdhA;gbkey=Gene;gene=xdhA;gene_biotype=protein_coding;locus_tag=LDO50_RS30470;old_locus_tag=BVI1335_970013 NZ_CAJZAO010000379.1 Protein Homology CDS 9068 10666 . - 0 ID=cds-WP_224020511.1;Parent=gene-LDO50_RS30470;Dbxref=GenBank:WP_224020511.1;Name=WP_224020511.1;Ontology_term=GO:0009115,GO:0004854,GO:0050660;gbkey=CDS;gene=xdhA;go_function=xanthine dehydrogenase activity|0004854||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=xanthine catabolic process|0009115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883457.1;locus_tag=LDO50_RS30470;product=xanthine dehydrogenase small subunit;protein_id=WP_224020511.1;transl_table=11 NZ_CAJZAO010000379.1 RefSeq gene 11039 12253 . + . ID=gene-LDO50_RS30475;Name=LDO50_RS30475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30475;old_locus_tag=BVI1335_970014 NZ_CAJZAO010000379.1 Protein Homology CDS 11039 12253 . + 0 ID=cds-WP_011883456.1;Parent=gene-LDO50_RS30475;Dbxref=GenBank:WP_011883456.1;Name=WP_011883456.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484942.1;locus_tag=LDO50_RS30475;product=MFS transporter;protein_id=WP_011883456.1;transl_table=11 NZ_CAJZAO010000379.1 RefSeq gene 12635 13525 . - . ID=gene-LDO50_RS30480;Name=LDO50_RS30480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30480;old_locus_tag=BVI1335_970015 NZ_CAJZAO010000379.1 Protein Homology CDS 12635 13525 . - 0 ID=cds-WP_059669211.1;Parent=gene-LDO50_RS30480;Dbxref=GenBank:WP_059669211.1;Name=WP_059669211.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544702.1;locus_tag=LDO50_RS30480;product=DMT family transporter;protein_id=WP_059669211.1;transl_table=11 NZ_CAJZAO010000379.1 RefSeq pseudogene 13659 14253 . + . ID=gene-LDO50_RS30485;Name=LDO50_RS30485;end_range=14253,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS30485;partial=true;pseudo=true NZ_CAJZAO010000379.1 Protein Homology CDS 13659 14253 . + 0 ID=cds-LDO50_RS30485;Parent=gene-LDO50_RS30485;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=14253,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417086.1;locus_tag=LDO50_RS30485;partial=true;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAO010000380.1 1 13168 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000380.1 RefSeq region 1 13168 . + . ID=NZ_CAJZAO010000380.1:1..13168;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_98 NZ_CAJZAO010000380.1 RefSeq gene 240 683 . + . ID=gene-LDO50_RS30490;Name=LDO50_RS30490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30490;old_locus_tag=BVI1335_980002 NZ_CAJZAO010000380.1 Protein Homology CDS 240 683 . + 0 ID=cds-WP_011882629.1;Parent=gene-LDO50_RS30490;Dbxref=GenBank:WP_011882629.1;Name=WP_011882629.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760724.1;locus_tag=LDO50_RS30490;product=GNAT family N-acetyltransferase;protein_id=WP_011882629.1;transl_table=11 NZ_CAJZAO010000380.1 RefSeq gene 756 974 . + . ID=gene-LDO50_RS30495;Name=LDO50_RS30495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30495;old_locus_tag=BVI1335_980003 NZ_CAJZAO010000380.1 Protein Homology CDS 756 974 . + 0 ID=cds-WP_009687837.1;Parent=gene-LDO50_RS30495;Dbxref=GenBank:WP_009687837.1;Name=WP_009687837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366505.1;locus_tag=LDO50_RS30495;product=DUF1653 domain-containing protein;protein_id=WP_009687837.1;transl_table=11 NZ_CAJZAO010000380.1 RefSeq gene 1007 1462 . - . ID=gene-LDO50_RS30500;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=LDO50_RS30500;old_locus_tag=BVI1335_980004 NZ_CAJZAO010000380.1 Protein Homology CDS 1007 1462 . - 0 ID=cds-WP_011882628.1;Parent=gene-LDO50_RS30500;Dbxref=GenBank:WP_011882628.1;Name=WP_011882628.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpC;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882628.1;locus_tag=LDO50_RS30500;product=ATP synthase F1 subunit epsilon;protein_id=WP_011882628.1;transl_table=11 NZ_CAJZAO010000380.1 RefSeq gene 1482 2351 . - . ID=gene-LDO50_RS30505;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=LDO50_RS30505;old_locus_tag=BVI1335_980005 NZ_CAJZAO010000380.1 Protein Homology CDS 1482 2351 . - 0 ID=cds-WP_034194551.1;Parent=gene-LDO50_RS30505;Dbxref=GenBank:WP_034194551.1;Name=WP_034194551.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547278.1;locus_tag=LDO50_RS30505;product=ATP synthase F1 subunit gamma;protein_id=WP_034194551.1;transl_table=11 NZ_CAJZAO010000380.1 RefSeq gene 2419 3555 . + . ID=gene-LDO50_RS30510;Name=LDO50_RS30510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30510;old_locus_tag=BVI1335_980006 NZ_CAJZAO010000380.1 Protein Homology CDS 2419 3555 . + 0 ID=cds-WP_072465539.1;Parent=gene-LDO50_RS30510;Dbxref=GenBank:WP_072465539.1;Name=WP_072465539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882626.1;locus_tag=LDO50_RS30510;product=phosphate acetyltransferase;protein_id=WP_072465539.1;transl_table=11 NZ_CAJZAO010000380.1 RefSeq gene 3567 4787 . + . ID=gene-LDO50_RS30515;Name=LDO50_RS30515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30515;old_locus_tag=BVI1335_980007 NZ_CAJZAO010000380.1 Protein Homology CDS 3567 4787 . + 0 ID=cds-WP_014725418.1;Parent=gene-LDO50_RS30515;Dbxref=GenBank:WP_014725418.1;Name=WP_014725418.1;Ontology_term=GO:0006082,GO:0016310,GO:0000287,GO:0005524,GO:0016301,GO:0016774;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C carboxyl group as acceptor|0016774||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725418.1;locus_tag=LDO50_RS30515;product=acetate/propionate family kinase;protein_id=WP_014725418.1;transl_table=11 NZ_CAJZAO010000380.1 RefSeq gene 4784 5893 . + . ID=gene-LDO50_RS30520;Name=LDO50_RS30520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30520;old_locus_tag=BVI1335_980008 NZ_CAJZAO010000380.1 Protein Homology CDS 4784 5893 . + 0 ID=cds-WP_011882624.1;Parent=gene-LDO50_RS30520;Dbxref=GenBank:WP_011882624.1;Name=WP_011882624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882624.1;locus_tag=LDO50_RS30520;product=alpha/beta fold hydrolase;protein_id=WP_011882624.1;transl_table=11 NZ_CAJZAO010000380.1 RefSeq gene 5934 7145 . - . ID=gene-LDO50_RS30525;Name=LDO50_RS30525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30525;old_locus_tag=BVI1335_980009 NZ_CAJZAO010000380.1 Protein Homology CDS 5934 7145 . - 0 ID=cds-WP_059475061.1;Parent=gene-LDO50_RS30525;Dbxref=GenBank:WP_059475061.1;Name=WP_059475061.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760725.1;locus_tag=LDO50_RS30525;product=winged helix-turn-helix domain-containing protein;protein_id=WP_059475061.1;transl_table=11 NZ_CAJZAO010000380.1 RefSeq gene 7479 8867 . - . ID=gene-LDO50_RS30530;Name=LDO50_RS30530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30530;old_locus_tag=BVI1335_980010 NZ_CAJZAO010000380.1 Protein Homology CDS 7479 8867 . - 0 ID=cds-WP_014725415.1;Parent=gene-LDO50_RS30530;Dbxref=GenBank:WP_014725415.1;Name=WP_014725415.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760208.1;locus_tag=LDO50_RS30530;product=MFS transporter;protein_id=WP_014725415.1;transl_table=11 NZ_CAJZAO010000380.1 RefSeq gene 9175 10890 . + . ID=gene-LDO50_RS30535;Name=treA;gbkey=Gene;gene=treA;gene_biotype=protein_coding;locus_tag=LDO50_RS30535;old_locus_tag=BVI1335_980012 NZ_CAJZAO010000380.1 Protein Homology CDS 9175 10890 . + 0 ID=cds-WP_224020512.1;Parent=gene-LDO50_RS30535;Dbxref=GenBank:WP_224020512.1;Name=WP_224020512.1;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;gene=treA;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547286.1;locus_tag=LDO50_RS30535;product=alpha%2Calpha-trehalase TreA;protein_id=WP_224020512.1;transl_table=11 NZ_CAJZAO010000380.1 RefSeq gene 11110 11496 . + . ID=gene-LDO50_RS30540;Name=LDO50_RS30540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30540;old_locus_tag=BVI1335_980013 NZ_CAJZAO010000380.1 Protein Homology CDS 11110 11496 . + 0 ID=cds-WP_080957615.1;Parent=gene-LDO50_RS30540;Dbxref=GenBank:WP_080957615.1;Name=WP_080957615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007584244.1;locus_tag=LDO50_RS30540;product=hypothetical protein;protein_id=WP_080957615.1;transl_table=11 NZ_CAJZAO010000380.1 RefSeq gene 11789 13168 . - . ID=gene-LDO50_RS30545;Name=LDO50_RS30545;end_range=13168,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30545;old_locus_tag=BVI1335_980015;partial=true NZ_CAJZAO010000380.1 Protein Homology CDS 11789 13168 . - 0 ID=cds-WP_224020513.1;Parent=gene-LDO50_RS30545;Dbxref=GenBank:WP_224020513.1;Name=WP_224020513.1;end_range=13168,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882617.1;locus_tag=LDO50_RS30545;partial=true;product=carbohydrate porin;protein_id=WP_224020513.1;transl_table=11 ##sequence-region NZ_CAJZAO010000381.1 1 67344 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAO010000381.1 RefSeq region 1 67344 . + . ID=NZ_CAJZAO010000381.1:1..67344;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI1335;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI1335_Contig_99 NZ_CAJZAO010000381.1 RefSeq gene 1 783 . - . ID=gene-LDO50_RS30550;Name=LDO50_RS30550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30550;partial=true;start_range=.,1 NZ_CAJZAO010000381.1 Protein Homology CDS 1 783 . - 0 ID=cds-WP_224020514.1;Parent=gene-LDO50_RS30550;Dbxref=GenBank:WP_224020514.1;Name=WP_224020514.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753864.1;locus_tag=LDO50_RS30550;partial=true;product=MFS transporter;protein_id=WP_224020514.1;start_range=.,1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 1099 1764 . + . ID=gene-LDO50_RS30555;Name=LDO50_RS30555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30555;old_locus_tag=BVI1335_990002 NZ_CAJZAO010000381.1 Protein Homology CDS 1099 1764 . + 0 ID=cds-WP_059669491.1;Parent=gene-LDO50_RS30555;Dbxref=GenBank:WP_059669491.1;Name=WP_059669491.1;Ontology_term=GO:0004733,GO:0010181;gbkey=CDS;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882930.1;locus_tag=LDO50_RS30555;product=HugZ family pyridoxamine 5'-phosphate oxidase;protein_id=WP_059669491.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 2112 2405 . + . ID=gene-LDO50_RS30560;Name=LDO50_RS30560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30560;old_locus_tag=BVI1335_990003 NZ_CAJZAO010000381.1 Protein Homology CDS 2112 2405 . + 0 ID=cds-WP_011882931.1;Parent=gene-LDO50_RS30560;Dbxref=GenBank:WP_011882931.1;Name=WP_011882931.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696300.1;locus_tag=LDO50_RS30560;product=H-NS histone family protein;protein_id=WP_011882931.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 2642 3799 . + . ID=gene-LDO50_RS30565;Name=LDO50_RS30565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30565;old_locus_tag=BVI1335_990004 NZ_CAJZAO010000381.1 Protein Homology CDS 2642 3799 . + 0 ID=cds-WP_034192927.1;Parent=gene-LDO50_RS30565;Dbxref=GenBank:WP_034192927.1;Name=WP_034192927.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212529.1;locus_tag=LDO50_RS30565;product=cation diffusion facilitator family transporter;protein_id=WP_034192927.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 3827 4297 . - . ID=gene-LDO50_RS30570;Name=LDO50_RS30570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30570;old_locus_tag=BVI1335_990005 NZ_CAJZAO010000381.1 Protein Homology CDS 3827 4297 . - 0 ID=cds-WP_011882933.1;Parent=gene-LDO50_RS30570;Dbxref=GenBank:WP_011882933.1;Name=WP_011882933.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016346759.1;locus_tag=LDO50_RS30570;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011882933.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 4377 5036 . - . ID=gene-LDO50_RS30575;Name=LDO50_RS30575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30575;old_locus_tag=BVI1335_990006 NZ_CAJZAO010000381.1 Protein Homology CDS 4377 5036 . - 0 ID=cds-WP_011882934.1;Parent=gene-LDO50_RS30575;Dbxref=GenBank:WP_011882934.1;Name=WP_011882934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477377.1;locus_tag=LDO50_RS30575;product=exonuclease;protein_id=WP_011882934.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 5033 5677 . - . ID=gene-LDO50_RS30580;Name=LDO50_RS30580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30580;old_locus_tag=BVI1335_990007 NZ_CAJZAO010000381.1 Protein Homology CDS 5033 5677 . - 0 ID=cds-WP_011882935.1;Parent=gene-LDO50_RS30580;Dbxref=GenBank:WP_011882935.1;Name=WP_011882935.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010107034.1;locus_tag=LDO50_RS30580;product=MBL fold metallo-hydrolase;protein_id=WP_011882935.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 6335 6946 . + . ID=gene-LDO50_RS30585;Name=LDO50_RS30585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30585;old_locus_tag=BVI1335_990008 NZ_CAJZAO010000381.1 Protein Homology CDS 6335 6946 . + 0 ID=cds-WP_014722250.1;Parent=gene-LDO50_RS30585;Dbxref=GenBank:WP_014722250.1;Name=WP_014722250.1;Ontology_term=GO:0071555,GO:0008932;gbkey=CDS;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401362.1;locus_tag=LDO50_RS30585;product=septal ring lytic transglycosylase RlpA family protein;protein_id=WP_014722250.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 7068 7946 . - . ID=gene-LDO50_RS30590;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=LDO50_RS30590;old_locus_tag=BVI1335_990009 NZ_CAJZAO010000381.1 Protein Homology CDS 7068 7946 . - 0 ID=cds-WP_034192925.1;Parent=gene-LDO50_RS30590;Dbxref=GenBank:WP_034192925.1;Name=WP_034192925.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882937.1;locus_tag=LDO50_RS30590;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_034192925.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 7993 8421 . + . ID=gene-LDO50_RS30595;Name=LDO50_RS30595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30595;old_locus_tag=BVI1335_990010 NZ_CAJZAO010000381.1 Protein Homology CDS 7993 8421 . + 0 ID=cds-WP_011882938.1;Parent=gene-LDO50_RS30595;Dbxref=GenBank:WP_011882938.1;Name=WP_011882938.1;Ontology_term=GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546685.1;locus_tag=LDO50_RS30595;product=YraN family protein;protein_id=WP_011882938.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 8548 9132 . + . ID=gene-LDO50_RS30600;Name=LDO50_RS30600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30600;old_locus_tag=BVI1335_990011 NZ_CAJZAO010000381.1 Protein Homology CDS 8548 9132 . + 0 ID=cds-WP_011882939.1;Parent=gene-LDO50_RS30600;Dbxref=GenBank:WP_011882939.1;Name=WP_011882939.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493587.1;locus_tag=LDO50_RS30600;product=SIS domain-containing protein;protein_id=WP_011882939.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 9150 9947 . + . ID=gene-LDO50_RS30605;Name=LDO50_RS30605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30605;old_locus_tag=BVI1335_990013 NZ_CAJZAO010000381.1 Protein Homology CDS 9150 9947 . + 0 ID=cds-WP_011882940.1;Parent=gene-LDO50_RS30605;Dbxref=GenBank:WP_011882940.1;Name=WP_011882940.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212533.1;locus_tag=LDO50_RS30605;product=BON domain-containing protein;protein_id=WP_011882940.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 9944 10300 . + . ID=gene-LDO50_RS30610;Name=LDO50_RS30610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30610;old_locus_tag=BVI1335_990012 NZ_CAJZAO010000381.1 Protein Homology CDS 9944 10300 . + 0 ID=cds-WP_011882941.1;Parent=gene-LDO50_RS30610;Dbxref=GenBank:WP_011882941.1;Name=WP_011882941.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753795.1;locus_tag=LDO50_RS30610;product=c-type cytochrome;protein_id=WP_011882941.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 10366 10441 . + . ID=gene-LDO50_RS30615;Name=LDO50_RS30615;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO50_RS30615;old_locus_tag=BVI1335_TRNA7 NZ_CAJZAO010000381.1 tRNAscan-SE tRNA 10366 10441 . + . ID=rna-LDO50_RS30615;Parent=gene-LDO50_RS30615;anticodon=(pos:10399..10401);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS30615;product=tRNA-Ala NZ_CAJZAO010000381.1 tRNAscan-SE exon 10366 10441 . + . ID=exon-LDO50_RS30615-1;Parent=rna-LDO50_RS30615;anticodon=(pos:10399..10401);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO50_RS30615;product=tRNA-Ala NZ_CAJZAO010000381.1 RefSeq gene 11080 12807 . - . ID=gene-LDO50_RS30620;Name=LDO50_RS30620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30620;old_locus_tag=BVI1335_990014 NZ_CAJZAO010000381.1 Protein Homology CDS 11080 12807 . - 0 ID=cds-WP_224020515.1;Parent=gene-LDO50_RS30620;Dbxref=GenBank:WP_224020515.1;Name=WP_224020515.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024642.6;locus_tag=LDO50_RS30620;product=nuclease-related domain-containing DEAD/DEAH box helicase;protein_id=WP_224020515.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 12809 17560 . - . ID=gene-LDO50_RS30625;Name=LDO50_RS30625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30625;old_locus_tag=BVI1335_990015 NZ_CAJZAO010000381.1 Protein Homology CDS 12809 17560 . - 0 ID=cds-WP_224020516.1;Parent=gene-LDO50_RS30625;Dbxref=GenBank:WP_224020516.1;Name=WP_224020516.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024420.6;locus_tag=LDO50_RS30625;product=DUF3883 domain-containing protein;protein_id=WP_224020516.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 18195 19181 . - . ID=gene-LDO50_RS30630;Name=LDO50_RS30630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30630;old_locus_tag=BVI1335_990018 NZ_CAJZAO010000381.1 GeneMarkS-2+ CDS 18195 19181 . - 0 ID=cds-WP_224020517.1;Parent=gene-LDO50_RS30630;Dbxref=GenBank:WP_224020517.1;Name=WP_224020517.1;Ontology_term=GO:0003677,GO:0004519,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS30630;product=HNH endonuclease;protein_id=WP_224020517.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 19503 20120 . + . ID=gene-LDO50_RS30635;Name=LDO50_RS30635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30635;old_locus_tag=BVI1335_990019 NZ_CAJZAO010000381.1 Protein Homology CDS 19503 20120 . + 0 ID=cds-WP_224020518.1;Parent=gene-LDO50_RS30635;Dbxref=GenBank:WP_224020518.1;Name=WP_224020518.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: protein motif:HMM:NF024880.6;locus_tag=LDO50_RS30635;product=class I SAM-dependent methyltransferase;protein_id=WP_224020518.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 20436 21875 . - . ID=gene-LDO50_RS30640;Name=LDO50_RS30640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30640;old_locus_tag=BVI1335_990020 NZ_CAJZAO010000381.1 Protein Homology CDS 20436 21875 . - 0 ID=cds-WP_308117680.1;Parent=gene-LDO50_RS30640;Dbxref=GenBank:WP_308117680.1;Name=WP_308117680.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.6;locus_tag=LDO50_RS30640;product=phage integrase central domain-containing protein;protein_id=WP_308117680.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 22161 23021 . + . ID=gene-LDO50_RS30645;Name=LDO50_RS30645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30645;old_locus_tag=BVI1335_990021 NZ_CAJZAO010000381.1 GeneMarkS-2+ CDS 22161 23021 . + 0 ID=cds-WP_224020519.1;Parent=gene-LDO50_RS30645;Dbxref=GenBank:WP_224020519.1;Name=WP_224020519.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS30645;product=hypothetical protein;protein_id=WP_224020519.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 23375 23653 . + . ID=gene-LDO50_RS30650;Name=LDO50_RS30650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30650;old_locus_tag=BVI1335_990022 NZ_CAJZAO010000381.1 Protein Homology CDS 23375 23653 . + 0 ID=cds-WP_224020520.1;Parent=gene-LDO50_RS30650;Dbxref=GenBank:WP_224020520.1;Name=WP_224020520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019139872.1;locus_tag=LDO50_RS30650;product=hypothetical protein;protein_id=WP_224020520.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 23655 24776 . + . ID=gene-LDO50_RS32145;Name=LDO50_RS32145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS32145;old_locus_tag=BVI1335_990023 NZ_CAJZAO010000381.1 GeneMarkS-2+ CDS 23655 24776 . + 0 ID=cds-WP_224020521.1;Parent=gene-LDO50_RS32145;Dbxref=GenBank:WP_224020521.1;Name=WP_224020521.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS32145;product=hypothetical protein;protein_id=WP_224020521.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 24763 26505 . + . ID=gene-LDO50_RS30660;Name=LDO50_RS30660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30660;old_locus_tag=BVI1335_990024 NZ_CAJZAO010000381.1 Protein Homology CDS 24763 26505 . + 0 ID=cds-WP_224020522.1;Parent=gene-LDO50_RS30660;Dbxref=GenBank:WP_224020522.1;Name=WP_224020522.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527877.1;locus_tag=LDO50_RS30660;product=AAA family ATPase;protein_id=WP_224020522.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 27039 28268 . + . ID=gene-LDO50_RS30665;Name=LDO50_RS30665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30665;old_locus_tag=BVI1335_990026 NZ_CAJZAO010000381.1 Protein Homology CDS 27039 28268 . + 0 ID=cds-WP_224020523.1;Parent=gene-LDO50_RS30665;Dbxref=GenBank:WP_224020523.1;Name=WP_224020523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011325951.1;locus_tag=LDO50_RS30665;product=YagK/YfjJ domain-containing protein;protein_id=WP_224020523.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 28428 28712 . + . ID=gene-LDO50_RS30670;Name=LDO50_RS30670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30670;old_locus_tag=BVI1335_990027 NZ_CAJZAO010000381.1 GeneMarkS-2+ CDS 28428 28712 . + 0 ID=cds-WP_224020524.1;Parent=gene-LDO50_RS30670;Dbxref=GenBank:WP_224020524.1;Name=WP_224020524.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS30670;product=hypothetical protein;protein_id=WP_224020524.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 29002 30225 . + . ID=gene-LDO50_RS30675;Name=LDO50_RS30675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30675;old_locus_tag=BVI1335_990028 NZ_CAJZAO010000381.1 GeneMarkS-2+ CDS 29002 30225 . + 0 ID=cds-WP_224020525.1;Parent=gene-LDO50_RS30675;Dbxref=GenBank:WP_224020525.1;Name=WP_224020525.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS30675;product=hypothetical protein;protein_id=WP_224020525.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 30222 32147 . + . ID=gene-LDO50_RS30680;Name=LDO50_RS30680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30680;old_locus_tag=BVI1335_990029 NZ_CAJZAO010000381.1 GeneMarkS-2+ CDS 30222 32147 . + 0 ID=cds-WP_224020526.1;Parent=gene-LDO50_RS30680;Dbxref=GenBank:WP_224020526.1;Name=WP_224020526.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS30680;product=hypothetical protein;protein_id=WP_224020526.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 32149 35040 . + . ID=gene-LDO50_RS30685;Name=LDO50_RS30685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30685;old_locus_tag=BVI1335_990030 NZ_CAJZAO010000381.1 Protein Homology CDS 32149 35040 . + 0 ID=cds-WP_224020527.1;Parent=gene-LDO50_RS30685;Dbxref=GenBank:WP_224020527.1;Name=WP_224020527.1;Ontology_term=GO:0005524,GO:0140658;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;inference=COORDINATES: protein motif:HMM:NF012403.6;locus_tag=LDO50_RS30685;product=DEAD/DEAH box helicase;protein_id=WP_224020527.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 35135 35431 . - . ID=gene-LDO50_RS30690;Name=LDO50_RS30690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30690;old_locus_tag=BVI1335_990031 NZ_CAJZAO010000381.1 GeneMarkS-2+ CDS 35135 35431 . - 0 ID=cds-WP_224020528.1;Parent=gene-LDO50_RS30690;Dbxref=GenBank:WP_224020528.1;Name=WP_224020528.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS30690;product=hypothetical protein;protein_id=WP_224020528.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 35465 37240 . - . ID=gene-LDO50_RS30695;Name=LDO50_RS30695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30695;old_locus_tag=BVI1335_990032 NZ_CAJZAO010000381.1 GeneMarkS-2+ CDS 35465 37240 . - 0 ID=cds-WP_224020529.1;Parent=gene-LDO50_RS30695;Dbxref=GenBank:WP_224020529.1;Name=WP_224020529.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS30695;product=hypothetical protein;protein_id=WP_224020529.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 37237 37716 . - . ID=gene-LDO50_RS30700;Name=LDO50_RS30700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30700;old_locus_tag=BVI1335_990033 NZ_CAJZAO010000381.1 Protein Homology CDS 37237 37716 . - 0 ID=cds-WP_224020530.1;Parent=gene-LDO50_RS30700;Dbxref=GenBank:WP_224020530.1;Name=WP_224020530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007749702.1;locus_tag=LDO50_RS30700;product=hypothetical protein;protein_id=WP_224020530.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 37713 38885 . - . ID=gene-LDO50_RS30705;Name=LDO50_RS30705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30705;old_locus_tag=BVI1335_990034 NZ_CAJZAO010000381.1 Protein Homology CDS 37713 38885 . - 0 ID=cds-WP_224020531.1;Parent=gene-LDO50_RS30705;Dbxref=GenBank:WP_224020531.1;Name=WP_224020531.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: protein motif:HMM:NF025495.7;locus_tag=LDO50_RS30705;product=dsDNA nuclease domain-containing protein;protein_id=WP_224020531.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 39450 39743 . - . ID=gene-LDO50_RS30710;Name=LDO50_RS30710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30710;old_locus_tag=BVI1335_990036 NZ_CAJZAO010000381.1 Protein Homology CDS 39450 39743 . - 0 ID=cds-WP_224020532.1;Parent=gene-LDO50_RS30710;Dbxref=GenBank:WP_224020532.1;Name=WP_224020532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694070.1;locus_tag=LDO50_RS30710;product=hypothetical protein;protein_id=WP_224020532.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 39740 40120 . - . ID=gene-LDO50_RS30715;Name=LDO50_RS30715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30715;old_locus_tag=BVI1335_990037 NZ_CAJZAO010000381.1 Protein Homology CDS 39740 40120 . - 0 ID=cds-WP_224020533.1;Parent=gene-LDO50_RS30715;Dbxref=GenBank:WP_224020533.1;Name=WP_224020533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017772478.1;locus_tag=LDO50_RS30715;product=hypothetical protein;protein_id=WP_224020533.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 40227 40487 . - . ID=gene-LDO50_RS30720;Name=LDO50_RS30720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30720 NZ_CAJZAO010000381.1 GeneMarkS-2+ CDS 40227 40487 . - 0 ID=cds-WP_224020534.1;Parent=gene-LDO50_RS30720;Dbxref=GenBank:WP_224020534.1;Name=WP_224020534.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS30720;product=hypothetical protein;protein_id=WP_224020534.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 40583 41575 . - . ID=gene-LDO50_RS30725;Name=LDO50_RS30725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30725;old_locus_tag=BVI1335_990039 NZ_CAJZAO010000381.1 Protein Homology CDS 40583 41575 . - 0 ID=cds-WP_224020535.1;Parent=gene-LDO50_RS30725;Dbxref=GenBank:WP_224020535.1;Name=WP_224020535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481748.1;locus_tag=LDO50_RS30725;product=hypothetical protein;protein_id=WP_224020535.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 41572 42489 . - . ID=gene-LDO50_RS30730;Name=LDO50_RS30730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30730;old_locus_tag=BVI1335_990040 NZ_CAJZAO010000381.1 Protein Homology CDS 41572 42489 . - 0 ID=cds-WP_224020536.1;Parent=gene-LDO50_RS30730;Dbxref=GenBank:WP_224020536.1;Name=WP_224020536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017772481.1;locus_tag=LDO50_RS30730;product=recombination directionality factor;protein_id=WP_224020536.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 42556 43551 . - . ID=gene-LDO50_RS30735;Name=LDO50_RS30735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30735;old_locus_tag=BVI1335_990041 NZ_CAJZAO010000381.1 Protein Homology CDS 42556 43551 . - 0 ID=cds-WP_224020537.1;Parent=gene-LDO50_RS30735;Dbxref=GenBank:WP_224020537.1;Name=WP_224020537.1;Ontology_term=GO:0004527;gbkey=CDS;go_function=exonuclease activity|0004527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004555359.1;locus_tag=LDO50_RS30735;product=YqaJ viral recombinase family nuclease;protein_id=WP_224020537.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 43623 44585 . - . ID=gene-LDO50_RS30740;Name=LDO50_RS30740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30740;old_locus_tag=BVI1335_990042 NZ_CAJZAO010000381.1 Protein Homology CDS 43623 44585 . - 0 ID=cds-WP_224020538.1;Parent=gene-LDO50_RS30740;Dbxref=GenBank:WP_224020538.1;Name=WP_224020538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008352262.1;locus_tag=LDO50_RS30740;product=DUF932 domain-containing protein;protein_id=WP_224020538.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 44678 45169 . - . ID=gene-LDO50_RS30745;Name=LDO50_RS30745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30745;old_locus_tag=BVI1335_990043 NZ_CAJZAO010000381.1 Protein Homology CDS 44678 45169 . - 0 ID=cds-WP_224020539.1;Parent=gene-LDO50_RS30745;Dbxref=GenBank:WP_224020539.1;Name=WP_224020539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020067294.1;locus_tag=LDO50_RS30745;product=hypothetical protein;protein_id=WP_224020539.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 45162 45293 . - . ID=gene-LDO50_RS30945;Name=LDO50_RS30945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30945;old_locus_tag=BVI1335_990044 NZ_CAJZAO010000381.1 GeneMarkS-2+ CDS 45162 45293 . - 0 ID=cds-WP_290370771.1;Parent=gene-LDO50_RS30945;Dbxref=GenBank:WP_290370771.1;Name=WP_290370771.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO50_RS30945;product=hypothetical protein;protein_id=WP_290370771.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 45679 48498 . + . ID=gene-LDO50_RS30750;Name=LDO50_RS30750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30750;old_locus_tag=BVI1335_990045 NZ_CAJZAO010000381.1 Protein Homology CDS 45679 48498 . + 0 ID=cds-WP_224020540.1;Parent=gene-LDO50_RS30750;Dbxref=GenBank:WP_224020540.1;Name=WP_224020540.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012403.6;locus_tag=LDO50_RS30750;product=DEAD/DEAH box helicase;protein_id=WP_224020540.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 48512 53440 . + . ID=gene-LDO50_RS30755;Name=LDO50_RS30755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30755;old_locus_tag=BVI1335_990046 NZ_CAJZAO010000381.1 Protein Homology CDS 48512 53440 . + 0 ID=cds-WP_224020541.1;Parent=gene-LDO50_RS30755;Dbxref=GenBank:WP_224020541.1;Name=WP_224020541.1;Ontology_term=GO:0006304,GO:0003677,GO:0003824;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF019291.6;locus_tag=LDO50_RS30755;product=Eco57I restriction-modification methylase domain-containing protein;protein_id=WP_224020541.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 53440 59778 . + . ID=gene-LDO50_RS30760;Name=LDO50_RS30760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30760;old_locus_tag=BVI1335_990047 NZ_CAJZAO010000381.1 Protein Homology CDS 53440 59778 . + 0 ID=cds-WP_224020542.1;Parent=gene-LDO50_RS30760;Dbxref=GenBank:WP_224020542.1;Name=WP_224020542.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012492.6;locus_tag=LDO50_RS30760;product=DEAD/DEAH box helicase;protein_id=WP_224020542.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 59789 61876 . + . ID=gene-LDO50_RS30765;Name=LDO50_RS30765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30765;old_locus_tag=BVI1335_990048 NZ_CAJZAO010000381.1 Protein Homology CDS 59789 61876 . + 0 ID=cds-WP_224020543.1;Parent=gene-LDO50_RS30765;Dbxref=GenBank:WP_224020543.1;Name=WP_224020543.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012789.6;locus_tag=LDO50_RS30765;product=UvrD-helicase domain-containing protein;protein_id=WP_224020543.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 62434 63798 . - . ID=gene-LDO50_RS30770;Name=LDO50_RS30770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30770;old_locus_tag=BVI1335_990050 NZ_CAJZAO010000381.1 Protein Homology CDS 62434 63798 . - 0 ID=cds-WP_224020544.1;Parent=gene-LDO50_RS30770;Dbxref=GenBank:WP_224020544.1;Name=WP_224020544.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482144.1;locus_tag=LDO50_RS30770;product=tyrosine-type recombinase/integrase;protein_id=WP_224020544.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 64099 65493 . - . ID=gene-LDO50_RS30775;Name=LDO50_RS30775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30775;old_locus_tag=BVI1335_990052 NZ_CAJZAO010000381.1 Protein Homology CDS 64099 65493 . - 0 ID=cds-WP_011882963.1;Parent=gene-LDO50_RS30775;Dbxref=GenBank:WP_011882963.1;Name=WP_011882963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882963.1;locus_tag=LDO50_RS30775;product=enolase C-terminal domain-like protein;protein_id=WP_011882963.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 65561 66669 . - . ID=gene-LDO50_RS30780;Name=LDO50_RS30780;end_range=66669,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30780;old_locus_tag=BVI1335_990053;partial=true NZ_CAJZAO010000381.1 Protein Homology CDS 65561 66669 . - 2 ID=cds-WP_443797886.1;Parent=gene-LDO50_RS30780;Dbxref=GenBank:WP_443797886.1;Name=WP_443797886.1;Ontology_term=GO:0055085,GO:0022857;end_range=66669,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401343.1;locus_tag=LDO50_RS30780;partial=true;product=MFS transporter;protein_id=WP_443797886.1;transl_table=11 NZ_CAJZAO010000381.1 RefSeq pseudogene 66680 66813 . - . ID=gene-LDO50_RS32150;Name=LDO50_RS32150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO50_RS32150;old_locus_tag=BVI1335_990054;partial=true;pseudo=true;start_range=.,66680 NZ_CAJZAO010000381.1 Protein Homology CDS 66680 66813 . - 0 ID=cds-LDO50_RS32150;Parent=gene-LDO50_RS32150;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401343.1;locus_tag=LDO50_RS32150;partial=true;product=MFS transporter;pseudo=true;start_range=.,66680;transl_table=11 NZ_CAJZAO010000381.1 RefSeq gene 67063 67344 . + . ID=gene-LDO50_RS30785;Name=LDO50_RS30785;end_range=67344,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO50_RS30785;partial=true NZ_CAJZAO010000381.1 Protein Homology CDS 67063 67344 . + 0 ID=cds-WP_224020545.1;Parent=gene-LDO50_RS30785;Dbxref=GenBank:WP_224020545.1;Name=WP_224020545.1;end_range=67344,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497438.1;locus_tag=LDO50_RS30785;partial=true;product=DUF2239 family protein;protein_id=WP_224020545.1;transl_table=11 ###