##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM91448480v1 #!genome-build-accession NCBI_Assembly:GCF_914484805.1 #!annotation-date 07/08/2025 10:42:02 #!annotation-source NCBI RefSeq GCF_914484805.1-RS_2025_07_08 ##sequence-region NZ_CAJZAL010000001.1 1 32454 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000001.1 RefSeq region 1 32454 . + . ID=NZ_CAJZAL010000001.1:1..32454;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_1 NZ_CAJZAL010000001.1 RefSeq pseudogene 1 133 . - . ID=gene-LDO38_RS30235;Name=LDO38_RS30235;end_range=133,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30235;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000001.1 Protein Homology CDS 1 133 . - 1 ID=cds-LDO38_RS30235;Parent=gene-LDO38_RS30235;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=133,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554228.1;locus_tag=LDO38_RS30235;partial=true;product=S49 family peptidase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq pseudogene 144 733 . - . ID=gene-LDO38_RS00005;Name=LDO38_RS00005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS00005;old_locus_tag=BVI2075_10001;partial=true;pseudo=true;start_range=.,144 NZ_CAJZAL010000001.1 Protein Homology CDS 144 733 . - 0 ID=cds-LDO38_RS00005;Parent=gene-LDO38_RS00005;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554228.1;locus_tag=LDO38_RS00005;partial=true;product=S49 family peptidase;pseudo=true;start_range=.,144;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 758 1165 . - . ID=gene-LDO38_RS00010;Name=LDO38_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00010;old_locus_tag=BVI2075_10002 NZ_CAJZAL010000001.1 Protein Homology CDS 758 1165 . - 0 ID=cds-WP_011883935.1;Parent=gene-LDO38_RS00010;Dbxref=GenBank:WP_011883935.1;Name=WP_011883935.1;Ontology_term=GO:0046872,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493745.1;locus_tag=LDO38_RS00010;product=Rieske (2Fe-2S) protein;protein_id=WP_011883935.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 1162 1821 . - . ID=gene-LDO38_RS00015;Name=LDO38_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00015;old_locus_tag=BVI2075_10003 NZ_CAJZAL010000001.1 Protein Homology CDS 1162 1821 . - 0 ID=cds-WP_011883934.1;Parent=gene-LDO38_RS00015;Dbxref=GenBank:WP_011883934.1;Name=WP_011883934.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904464.1;locus_tag=LDO38_RS00015;product=HAD-IA family hydrolase;protein_id=WP_011883934.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 1827 2831 . - . ID=gene-LDO38_RS00020;Name=LDO38_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00020;old_locus_tag=BVI2075_10004 NZ_CAJZAL010000001.1 Protein Homology CDS 1827 2831 . - 0 ID=cds-WP_011883933.1;Parent=gene-LDO38_RS00020;Dbxref=GenBank:WP_011883933.1;Name=WP_011883933.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467543.1;locus_tag=LDO38_RS00020;product=RluA family pseudouridine synthase;protein_id=WP_011883933.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 3566 5254 . + . ID=gene-LDO38_RS30125;Name=LDO38_RS30125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30125;old_locus_tag=BVI2075_10005 NZ_CAJZAL010000001.1 Protein Homology CDS 3566 5254 . + 0 ID=cds-WP_354003639.1;Parent=gene-LDO38_RS30125;Dbxref=GenBank:WP_354003639.1;Name=WP_354003639.1;Ontology_term=GO:0006396,GO:0006397,GO:0003723,GO:0004519,GO:0004540,GO:0046872;gbkey=CDS;go_function=RNA binding|0003723||IEA,endonuclease activity|0004519||IEA,RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=RNA processing|0006396||IEA,mRNA processing|0006397||IEA;inference=COORDINATES: protein motif:HMM:TIGR00757.1;locus_tag=LDO38_RS30125;product=Rne/Rng family ribonuclease;protein_id=WP_354003639.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq pseudogene 5203 6279 . + . ID=gene-LDO38_RS30130;Name=LDO38_RS30130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30130;old_locus_tag=BVI2075_10006;partial=true;pseudo=true;start_range=.,5203 NZ_CAJZAL010000001.1 Protein Homology CDS 5203 6279 . + 0 ID=cds-LDO38_RS30130;Parent=gene-LDO38_RS30130;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657752.1;locus_tag=LDO38_RS30130;partial=true;product=class I adenylate-forming enzyme family protein;pseudo=true;start_range=.,5203;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 6295 7257 . - . ID=gene-LDO38_RS00030;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=LDO38_RS00030;old_locus_tag=BVI2075_10007 NZ_CAJZAL010000001.1 Protein Homology CDS 6295 7257 . - 0 ID=cds-WP_014723521.1;Parent=gene-LDO38_RS00030;Dbxref=GenBank:WP_014723521.1;Name=WP_014723521.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410310.1;locus_tag=LDO38_RS00030;product=site-specific tyrosine recombinase XerD;protein_id=WP_014723521.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 7254 7724 . - . ID=gene-LDO38_RS00035;Name=LDO38_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00035;old_locus_tag=BVI2075_10008 NZ_CAJZAL010000001.1 Protein Homology CDS 7254 7724 . - 0 ID=cds-WP_059460539.1;Parent=gene-LDO38_RS00035;Dbxref=GenBank:WP_059460539.1;Name=WP_059460539.1;Ontology_term=GO:0006281,GO:0032259,GO:0003677,GO:0003908,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750949.1;locus_tag=LDO38_RS00035;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_059460539.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 7783 9009 . - . ID=gene-LDO38_RS00040;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=LDO38_RS00040;old_locus_tag=BVI2075_10009 NZ_CAJZAL010000001.1 Protein Homology CDS 7783 9009 . - 0 ID=cds-WP_034192642.1;Parent=gene-LDO38_RS00040;Dbxref=GenBank:WP_034192642.1;Name=WP_034192642.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189719.1;locus_tag=LDO38_RS00040;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_034192642.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 9027 9578 . + . ID=gene-LDO38_RS00045;Name=LDO38_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00045;old_locus_tag=BVI2075_10011 NZ_CAJZAL010000001.1 Protein Homology CDS 9027 9578 . + 0 ID=cds-WP_014723523.1;Parent=gene-LDO38_RS00045;Dbxref=GenBank:WP_014723523.1;Name=WP_014723523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492836.1;locus_tag=LDO38_RS00045;product=bifunctional tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE/phosphotransferase;protein_id=WP_014723523.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 9560 11077 . + . ID=gene-LDO38_RS00050;Name=LDO38_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00050;old_locus_tag=BVI2075_10010 NZ_CAJZAL010000001.1 Protein Homology CDS 9560 11077 . + 0 ID=cds-WP_011885826.1;Parent=gene-LDO38_RS00050;Dbxref=GenBank:WP_011885826.1;Name=WP_011885826.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885826.1;locus_tag=LDO38_RS00050;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_011885826.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 11193 12071 . - . ID=gene-LDO38_RS00055;Name=LDO38_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00055;old_locus_tag=BVI2075_10012 NZ_CAJZAL010000001.1 Protein Homology CDS 11193 12071 . - 0 ID=cds-WP_172820464.1;Parent=gene-LDO38_RS00055;Dbxref=GenBank:WP_172820464.1;Name=WP_172820464.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467684.1;locus_tag=LDO38_RS00055;product=EamA family transporter;protein_id=WP_172820464.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 12508 13389 . + . ID=gene-LDO38_RS00060;Name=LDO38_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00060;old_locus_tag=BVI2075_10013 NZ_CAJZAL010000001.1 Protein Homology CDS 12508 13389 . + 0 ID=cds-WP_011885828.1;Parent=gene-LDO38_RS00060;Dbxref=GenBank:WP_011885828.1;Name=WP_011885828.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329104.1;locus_tag=LDO38_RS00060;product=pirin family protein;protein_id=WP_011885828.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 13442 14287 . + . ID=gene-LDO38_RS00065;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=LDO38_RS00065;old_locus_tag=BVI2075_10014 NZ_CAJZAL010000001.1 Protein Homology CDS 13442 14287 . + 0 ID=cds-WP_034192645.1;Parent=gene-LDO38_RS00065;Dbxref=GenBank:WP_034192645.1;Name=WP_034192645.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398476.1;locus_tag=LDO38_RS00065;product=thioredoxin;protein_id=WP_034192645.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 14319 15176 . - . ID=gene-LDO38_RS00070;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=LDO38_RS00070;old_locus_tag=BVI2075_10015 NZ_CAJZAL010000001.1 Protein Homology CDS 14319 15176 . - 0 ID=cds-WP_034192646.1;Parent=gene-LDO38_RS00070;Dbxref=GenBank:WP_034192646.1;Name=WP_034192646.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885830.1;locus_tag=LDO38_RS00070;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_034192646.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 15306 15950 . + . ID=gene-LDO38_RS00075;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=LDO38_RS00075;old_locus_tag=BVI2075_10016 NZ_CAJZAL010000001.1 Protein Homology CDS 15306 15950 . + 0 ID=cds-WP_014723527.1;Parent=gene-LDO38_RS00075;Dbxref=GenBank:WP_014723527.1;Name=WP_014723527.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012399931.1;locus_tag=LDO38_RS00075;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_014723527.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 16078 17298 . + . ID=gene-LDO38_RS00080;Name=LDO38_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00080;old_locus_tag=BVI2075_10018 NZ_CAJZAL010000001.1 Protein Homology CDS 16078 17298 . + 0 ID=cds-WP_014723528.1;Parent=gene-LDO38_RS00080;Dbxref=GenBank:WP_014723528.1;Name=WP_014723528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602204.1;locus_tag=LDO38_RS00080;product=SAM-dependent methyltransferase;protein_id=WP_014723528.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 17322 18620 . + . ID=gene-LDO38_RS00085;Name=LDO38_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00085;old_locus_tag=BVI2075_10019 NZ_CAJZAL010000001.1 Protein Homology CDS 17322 18620 . + 0 ID=cds-WP_069224303.1;Parent=gene-LDO38_RS00085;Dbxref=GenBank:WP_069224303.1;Name=WP_069224303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416332.1;locus_tag=LDO38_RS00085;product=DUF72 domain-containing protein;protein_id=WP_069224303.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 18687 19247 . - . ID=gene-LDO38_RS00090;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=LDO38_RS00090;old_locus_tag=BVI2075_10020 NZ_CAJZAL010000001.1 Protein Homology CDS 18687 19247 . - 0 ID=cds-WP_045579433.1;Parent=gene-LDO38_RS00090;Dbxref=GenBank:WP_045579433.1;Name=WP_045579433.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546062.1;locus_tag=LDO38_RS00090;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_045579433.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 19485 19679 . + . ID=gene-LDO38_RS00095;Name=LDO38_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00095 NZ_CAJZAL010000001.1 GeneMarkS-2+ CDS 19485 19679 . + 0 ID=cds-WP_124260310.1;Parent=gene-LDO38_RS00095;Dbxref=GenBank:WP_124260310.1;Name=WP_124260310.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS00095;product=hypothetical protein;protein_id=WP_124260310.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 19806 21212 . + . ID=gene-LDO38_RS00100;Name=LDO38_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00100;old_locus_tag=BVI2075_10022 NZ_CAJZAL010000001.1 Protein Homology CDS 19806 21212 . + 0 ID=cds-WP_059621825.1;Parent=gene-LDO38_RS00100;Dbxref=GenBank:WP_059621825.1;Name=WP_059621825.1;Ontology_term=GO:0008430;gbkey=CDS;go_function=selenium binding|0008430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896218.1;locus_tag=LDO38_RS00100;product=selenium-binding protein SBP56-related protein;protein_id=WP_059621825.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 21209 21874 . + . ID=gene-LDO38_RS00105;Name=LDO38_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00105;old_locus_tag=BVI2075_10023 NZ_CAJZAL010000001.1 Protein Homology CDS 21209 21874 . + 0 ID=cds-WP_069246307.1;Parent=gene-LDO38_RS00105;Dbxref=GenBank:WP_069246307.1;Name=WP_069246307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761046.1;locus_tag=LDO38_RS00105;product=hypothetical protein;protein_id=WP_069246307.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 22220 22729 . + . ID=gene-LDO38_RS00110;Name=LDO38_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00110;old_locus_tag=BVI2075_10024 NZ_CAJZAL010000001.1 Protein Homology CDS 22220 22729 . + 0 ID=cds-WP_011885865.1;Parent=gene-LDO38_RS00110;Dbxref=GenBank:WP_011885865.1;Name=WP_011885865.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477993.1;locus_tag=LDO38_RS00110;product=flavin reductase family protein;protein_id=WP_011885865.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 22716 23216 . - . ID=gene-LDO38_RS00115;Name=LDO38_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00115;old_locus_tag=BVI2075_10025 NZ_CAJZAL010000001.1 Protein Homology CDS 22716 23216 . - 0 ID=cds-WP_006477992.1;Parent=gene-LDO38_RS00115;Dbxref=GenBank:WP_006477992.1;Name=WP_006477992.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009980145.1;locus_tag=LDO38_RS00115;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_006477992.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 23347 23988 . + . ID=gene-LDO38_RS00120;Name=kynB;gbkey=Gene;gene=kynB;gene_biotype=protein_coding;locus_tag=LDO38_RS00120;old_locus_tag=BVI2075_10026 NZ_CAJZAL010000001.1 Protein Homology CDS 23347 23988 . + 0 ID=cds-WP_014723534.1;Parent=gene-LDO38_RS00120;Dbxref=GenBank:WP_014723534.1;Name=WP_014723534.1;Ontology_term=GO:0019441,GO:0004061;gbkey=CDS;gene=kynB;go_function=arylformamidase activity|0004061||IEA;go_process=L-tryptophan catabolic process to kynurenine|0019441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546066.1;locus_tag=LDO38_RS00120;product=arylformamidase;protein_id=WP_014723534.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 24015 25265 . + . ID=gene-LDO38_RS00125;Name=kynU;gbkey=Gene;gene=kynU;gene_biotype=protein_coding;locus_tag=LDO38_RS00125;old_locus_tag=BVI2075_10027 NZ_CAJZAL010000001.1 Protein Homology CDS 24015 25265 . + 0 ID=cds-WP_124260311.1;Parent=gene-LDO38_RS00125;Dbxref=GenBank:WP_124260311.1;Name=WP_124260311.1;Ontology_term=GO:0006569,GO:0009435,GO:0030170,GO:0030429,GO:0005737;gbkey=CDS;gene=kynU;go_component=cytoplasm|0005737||IEA;go_function=pyridoxal phosphate binding|0030170||IEA,kynureninase activity|0030429||IEA;go_process=L-tryptophan catabolic process|0006569||IEA,NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004550795.1;locus_tag=LDO38_RS00125;product=kynureninase;protein_id=WP_124260311.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 25331 26248 . + . ID=gene-LDO38_RS00130;Name=kynA;gbkey=Gene;gene=kynA;gene_biotype=protein_coding;locus_tag=LDO38_RS00130;old_locus_tag=BVI2075_10028 NZ_CAJZAL010000001.1 Protein Homology CDS 25331 26248 . + 0 ID=cds-WP_059740950.1;Parent=gene-LDO38_RS00130;Dbxref=GenBank:WP_059740950.1;Name=WP_059740950.1;Ontology_term=GO:0019441,GO:0004833;gbkey=CDS;gene=kynA;go_function=tryptophan 2%2C3-dioxygenase activity|0004833||IEA;go_process=L-tryptophan catabolic process to kynurenine|0019441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482479.1;locus_tag=LDO38_RS00130;product=tryptophan 2%2C3-dioxygenase;protein_id=WP_059740950.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 26633 28027 . + . ID=gene-LDO38_RS00135;Name=dalD;gbkey=Gene;gene=dalD;gene_biotype=protein_coding;locus_tag=LDO38_RS00135;old_locus_tag=BVI2075_10030 NZ_CAJZAL010000001.1 Protein Homology CDS 26633 28027 . + 0 ID=cds-WP_059740953.1;Parent=gene-LDO38_RS00135;Dbxref=GenBank:WP_059740953.1;Name=WP_059740953.1;Ontology_term=GO:0051161,GO:0047813;gbkey=CDS;gene=dalD;go_function=D-arabinitol 4-dehydrogenase activity|0047813||IEA;go_process=arabitol metabolic process|0051161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492844.1;locus_tag=LDO38_RS00135;product=D-arabinitol 4-dehydrogenase;protein_id=WP_059740953.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 28163 29644 . + . ID=gene-LDO38_RS00140;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=LDO38_RS00140;old_locus_tag=BVI2075_10031 NZ_CAJZAL010000001.1 Protein Homology CDS 28163 29644 . + 0 ID=cds-WP_011885870.1;Parent=gene-LDO38_RS00140;Dbxref=GenBank:WP_011885870.1;Name=WP_011885870.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334025.1;locus_tag=LDO38_RS00140;product=xylulokinase;protein_id=WP_011885870.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 29681 30679 . + . ID=gene-LDO38_RS00145;Name=LDO38_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00145;old_locus_tag=BVI2075_10032 NZ_CAJZAL010000001.1 Protein Homology CDS 29681 30679 . + 0 ID=cds-WP_174479786.1;Parent=gene-LDO38_RS00145;Dbxref=GenBank:WP_174479786.1;Name=WP_174479786.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885871.1;locus_tag=LDO38_RS00145;product=sugar-binding transcriptional regulator;protein_id=WP_174479786.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 30880 31989 . - . ID=gene-LDO38_RS00150;Name=LDO38_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00150;old_locus_tag=BVI2075_10033 NZ_CAJZAL010000001.1 Protein Homology CDS 30880 31989 . - 0 ID=cds-WP_045578833.1;Parent=gene-LDO38_RS00150;Dbxref=GenBank:WP_045578833.1;Name=WP_045578833.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885872.1;locus_tag=LDO38_RS00150;product=ABC transporter ATP-binding protein;protein_id=WP_045578833.1;transl_table=11 NZ_CAJZAL010000001.1 RefSeq gene 32045 32454 . - . ID=gene-LDO38_RS00155;Name=LDO38_RS00155;end_range=32454,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00155;partial=true NZ_CAJZAL010000001.1 Protein Homology CDS 32045 32454 . - 2 ID=cds-WP_224056132.1;Parent=gene-LDO38_RS00155;Dbxref=GenBank:WP_224056132.1;Name=WP_224056132.1;Ontology_term=GO:0016787;end_range=32454,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398448.1;locus_tag=LDO38_RS00155;partial=true;product=HAD family hydrolase;protein_id=WP_224056132.1;transl_table=11 ##sequence-region NZ_CAJZAL010000002.1 1 74722 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000002.1 RefSeq region 1 74722 . + . ID=NZ_CAJZAL010000002.1:1..74722;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_10 NZ_CAJZAL010000002.1 RefSeq gene 349 666 . + . ID=gene-LDO38_RS00160;Name=LDO38_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00160;old_locus_tag=BVI2075_100002 NZ_CAJZAL010000002.1 Protein Homology CDS 349 666 . + 0 ID=cds-WP_014722338.1;Parent=gene-LDO38_RS00160;Dbxref=GenBank:WP_014722338.1;Name=WP_014722338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546583.1;locus_tag=LDO38_RS00160;product=DUF7716 domain-containing protein;protein_id=WP_014722338.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 759 1541 . - . ID=gene-LDO38_RS00165;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=LDO38_RS00165;old_locus_tag=BVI2075_100003 NZ_CAJZAL010000002.1 Protein Homology CDS 759 1541 . - 0 ID=cds-WP_011883100.1;Parent=gene-LDO38_RS00165;Dbxref=GenBank:WP_011883100.1;Name=WP_011883100.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106837.1;locus_tag=LDO38_RS00165;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_011883100.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 1538 2884 . - . ID=gene-LDO38_RS00170;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=LDO38_RS00170;old_locus_tag=BVI2075_100004 NZ_CAJZAL010000002.1 Protein Homology CDS 1538 2884 . - 0 ID=cds-WP_011883101.1;Parent=gene-LDO38_RS00170;Dbxref=GenBank:WP_011883101.1;Name=WP_011883101.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409507.1;locus_tag=LDO38_RS00170;product=type VI secretion system baseplate subunit TssK;protein_id=WP_011883101.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 2987 3586 . - . ID=gene-LDO38_RS00175;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=LDO38_RS00175;old_locus_tag=BVI2075_100005 NZ_CAJZAL010000002.1 Protein Homology CDS 2987 3586 . - 0 ID=cds-WP_172820452.1;Parent=gene-LDO38_RS00175;Dbxref=GenBank:WP_172820452.1;Name=WP_172820452.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910489.1;locus_tag=LDO38_RS00175;product=type VI secretion system lipoprotein TssJ;protein_id=WP_172820452.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 3973 4608 . + . ID=gene-LDO38_RS00180;Name=LDO38_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00180;old_locus_tag=BVI2075_100006 NZ_CAJZAL010000002.1 Protein Homology CDS 3973 4608 . + 0 ID=cds-WP_011883103.1;Parent=gene-LDO38_RS00180;Dbxref=GenBank:WP_011883103.1;Name=WP_011883103.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883103.1;locus_tag=LDO38_RS00180;product=tetratricopeptide repeat protein;protein_id=WP_011883103.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 4663 5178 . + . ID=gene-LDO38_RS00185;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=LDO38_RS00185;old_locus_tag=BVI2075_100007 NZ_CAJZAL010000002.1 Protein Homology CDS 4663 5178 . + 0 ID=cds-WP_011883104.1;Parent=gene-LDO38_RS00185;Dbxref=GenBank:WP_011883104.1;Name=WP_011883104.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106779.1;locus_tag=LDO38_RS00185;product=type VI secretion system contractile sheath small subunit;protein_id=WP_011883104.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 5194 6684 . + . ID=gene-LDO38_RS00190;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=LDO38_RS00190;old_locus_tag=BVI2075_100008 NZ_CAJZAL010000002.1 Protein Homology CDS 5194 6684 . + 0 ID=cds-WP_011883105.1;Parent=gene-LDO38_RS00190;Dbxref=GenBank:WP_011883105.1;Name=WP_011883105.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012426790.1;locus_tag=LDO38_RS00190;product=type VI secretion system contractile sheath large subunit;protein_id=WP_011883105.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 6755 7258 . + . ID=gene-LDO38_RS00195;Name=LDO38_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00195;old_locus_tag=BVI2075_100009 NZ_CAJZAL010000002.1 Protein Homology CDS 6755 7258 . + 0 ID=cds-WP_011883106.1;Parent=gene-LDO38_RS00195;Dbxref=GenBank:WP_011883106.1;Name=WP_011883106.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883106.1;locus_tag=LDO38_RS00195;product=Hcp family type VI secretion system effector;protein_id=WP_011883106.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 7321 7806 . + . ID=gene-LDO38_RS00200;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=LDO38_RS00200;old_locus_tag=BVI2075_100010 NZ_CAJZAL010000002.1 Protein Homology CDS 7321 7806 . + 0 ID=cds-WP_011883107.1;Parent=gene-LDO38_RS00200;Dbxref=GenBank:WP_011883107.1;Name=WP_011883107.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883107.1;locus_tag=LDO38_RS00200;product=type VI secretion system baseplate subunit TssE;protein_id=WP_011883107.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 7884 9719 . + . ID=gene-LDO38_RS00205;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LDO38_RS00205;old_locus_tag=BVI2075_100011 NZ_CAJZAL010000002.1 Protein Homology CDS 7884 9719 . + 0 ID=cds-WP_059463913.1;Parent=gene-LDO38_RS00205;Dbxref=GenBank:WP_059463913.1;Name=WP_059463913.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484396.1;locus_tag=LDO38_RS00205;product=type VI secretion system baseplate subunit TssF;protein_id=WP_059463913.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 9683 10783 . + . ID=gene-LDO38_RS00210;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=LDO38_RS00210;old_locus_tag=BVI2075_100012 NZ_CAJZAL010000002.1 Protein Homology CDS 9683 10783 . + 0 ID=cds-WP_011883109.1;Parent=gene-LDO38_RS00210;Dbxref=GenBank:WP_011883109.1;Name=WP_011883109.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010096521.1;locus_tag=LDO38_RS00210;product=type VI secretion system baseplate subunit TssG;protein_id=WP_011883109.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 10822 13494 . + . ID=gene-LDO38_RS00215;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=LDO38_RS00215;old_locus_tag=BVI2075_100013 NZ_CAJZAL010000002.1 Protein Homology CDS 10822 13494 . + 0 ID=cds-WP_069246126.1;Parent=gene-LDO38_RS00215;Dbxref=GenBank:WP_069246126.1;Name=WP_069246126.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009967199.1;locus_tag=LDO38_RS00215;product=type VI secretion system ATPase TssH;protein_id=WP_069246126.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 13534 14655 . + . ID=gene-LDO38_RS00220;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=LDO38_RS00220;old_locus_tag=BVI2075_100014 NZ_CAJZAL010000002.1 Protein Homology CDS 13534 14655 . + 0 ID=cds-WP_011883111.1;Parent=gene-LDO38_RS00220;Dbxref=GenBank:WP_011883111.1;Name=WP_011883111.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350763.1;locus_tag=LDO38_RS00220;product=type VI secretion system protein TssA;protein_id=WP_011883111.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 14855 15430 . - . ID=gene-LDO38_RS00225;Name=LDO38_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00225;old_locus_tag=BVI2075_100015 NZ_CAJZAL010000002.1 Protein Homology CDS 14855 15430 . - 0 ID=cds-WP_045578564.1;Parent=gene-LDO38_RS00225;Dbxref=GenBank:WP_045578564.1;Name=WP_045578564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722345.1;locus_tag=LDO38_RS00225;product=hypothetical protein;protein_id=WP_045578564.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 15572 16531 . - . ID=gene-LDO38_RS00230;Name=LDO38_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00230;old_locus_tag=BVI2075_100016 NZ_CAJZAL010000002.1 Protein Homology CDS 15572 16531 . - 0 ID=cds-WP_069246127.1;Parent=gene-LDO38_RS00230;Dbxref=GenBank:WP_069246127.1;Name=WP_069246127.1;Ontology_term=GO:0015288,GO:0042834,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757145.1;locus_tag=LDO38_RS00230;product=OmpA family protein;protein_id=WP_069246127.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 16536 17525 . - . ID=gene-LDO38_RS00235;Name=tagF;gbkey=Gene;gene=tagF;gene_biotype=protein_coding;locus_tag=LDO38_RS00235;old_locus_tag=BVI2075_100017 NZ_CAJZAL010000002.1 Protein Homology CDS 16536 17525 . - 0 ID=cds-WP_011883114.1;Parent=gene-LDO38_RS00235;Dbxref=GenBank:WP_011883114.1;Name=WP_011883114.1;gbkey=CDS;gene=tagF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483243.1;locus_tag=LDO38_RS00235;product=type VI secretion system-associated protein TagF;protein_id=WP_011883114.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 17522 21463 . - . ID=gene-LDO38_RS00240;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=LDO38_RS00240;old_locus_tag=BVI2075_100018 NZ_CAJZAL010000002.1 Protein Homology CDS 17522 21463 . - 0 ID=cds-WP_011883115.1;Parent=gene-LDO38_RS00240;Dbxref=GenBank:WP_011883115.1;Name=WP_011883115.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssM;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655832.1;locus_tag=LDO38_RS00240;product=type VI secretion system membrane subunit TssM;protein_id=WP_011883115.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 21765 22610 . - . ID=gene-LDO38_RS00245;Name=LDO38_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00245;old_locus_tag=BVI2075_100020 NZ_CAJZAL010000002.1 Protein Homology CDS 21765 22610 . - 0 ID=cds-WP_014722348.1;Parent=gene-LDO38_RS00245;Dbxref=GenBank:WP_014722348.1;Name=WP_014722348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898247.1;locus_tag=LDO38_RS00245;product=M15 family metallopeptidase;protein_id=WP_014722348.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 22732 23700 . + . ID=gene-LDO38_RS00250;Name=LDO38_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00250;old_locus_tag=BVI2075_100021 NZ_CAJZAL010000002.1 Protein Homology CDS 22732 23700 . + 0 ID=cds-WP_011883117.1;Parent=gene-LDO38_RS00250;Dbxref=GenBank:WP_011883117.1;Name=WP_011883117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494415.1;locus_tag=LDO38_RS00250;product=hypothetical protein;protein_id=WP_011883117.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 23880 24908 . + . ID=gene-LDO38_RS00255;Name=LDO38_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00255;old_locus_tag=BVI2075_100022 NZ_CAJZAL010000002.1 Protein Homology CDS 23880 24908 . + 0 ID=cds-WP_224056133.1;Parent=gene-LDO38_RS00255;Dbxref=GenBank:WP_224056133.1;Name=WP_224056133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753612.1;locus_tag=LDO38_RS00255;product=transporter;protein_id=WP_224056133.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 25025 27193 . - . ID=gene-LDO38_RS00260;Name=LDO38_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00260;old_locus_tag=BVI2075_100023 NZ_CAJZAL010000002.1 Protein Homology CDS 25025 27193 . - 0 ID=cds-WP_011883119.1;Parent=gene-LDO38_RS00260;Dbxref=GenBank:WP_011883119.1;Name=WP_011883119.1;Ontology_term=GO:0006508,GO:0008233,GO:0008235,GO:0008270,GO:0046872;gbkey=CDS;go_function=peptidase activity|0008233||IEA,metalloexopeptidase activity|0008235||IEA,zinc ion binding|0008270||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411754.1;locus_tag=LDO38_RS00260;product=M1 family metallopeptidase;protein_id=WP_011883119.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 27839 28333 . + . ID=gene-LDO38_RS00265;Name=LDO38_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00265;old_locus_tag=BVI2075_100026 NZ_CAJZAL010000002.1 Protein Homology CDS 27839 28333 . + 0 ID=cds-WP_011883121.1;Parent=gene-LDO38_RS00265;Dbxref=GenBank:WP_011883121.1;Name=WP_011883121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362981.1;locus_tag=LDO38_RS00265;product=LEA type 2 family protein;protein_id=WP_011883121.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 28432 29565 . + . ID=gene-LDO38_RS00270;Name=LDO38_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00270;old_locus_tag=BVI2075_100025 NZ_CAJZAL010000002.1 Protein Homology CDS 28432 29565 . + 0 ID=cds-WP_014722352.1;Parent=gene-LDO38_RS00270;Dbxref=GenBank:WP_014722352.1;Name=WP_014722352.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898242.1;locus_tag=LDO38_RS00270;product=methyltransferase;protein_id=WP_014722352.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 29655 30545 . + . ID=gene-LDO38_RS00275;Name=LDO38_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00275;old_locus_tag=BVI2075_100027 NZ_CAJZAL010000002.1 Protein Homology CDS 29655 30545 . + 0 ID=cds-WP_011883123.1;Parent=gene-LDO38_RS00275;Dbxref=GenBank:WP_011883123.1;Name=WP_011883123.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400515.1;locus_tag=LDO38_RS00275;product=class I SAM-dependent methyltransferase;protein_id=WP_011883123.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 30610 31200 . - . ID=gene-LDO38_RS00280;Name=LDO38_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00280;old_locus_tag=BVI2075_100028 NZ_CAJZAL010000002.1 Protein Homology CDS 30610 31200 . - 0 ID=cds-WP_110421920.1;Parent=gene-LDO38_RS00280;Dbxref=GenBank:WP_110421920.1;Name=WP_110421920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333668.1;locus_tag=LDO38_RS00280;product=DUF1415 domain-containing protein;protein_id=WP_110421920.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 31283 31906 . - . ID=gene-LDO38_RS00285;Name=LDO38_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00285;old_locus_tag=BVI2075_100030 NZ_CAJZAL010000002.1 Protein Homology CDS 31283 31906 . - 0 ID=cds-WP_011883125.1;Parent=gene-LDO38_RS00285;Dbxref=GenBank:WP_011883125.1;Name=WP_011883125.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214227.1;locus_tag=LDO38_RS00285;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011883125.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 32124 33410 . + . ID=gene-LDO38_RS00290;Name=LDO38_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00290;old_locus_tag=BVI2075_100031 NZ_CAJZAL010000002.1 Protein Homology CDS 32124 33410 . + 0 ID=cds-WP_224056134.1;Parent=gene-LDO38_RS00290;Dbxref=GenBank:WP_224056134.1;Name=WP_224056134.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883126.1;locus_tag=LDO38_RS00290;product=MFS transporter;protein_id=WP_224056134.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 33816 34421 . + . ID=gene-LDO38_RS00295;Name=LDO38_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00295;old_locus_tag=BVI2075_100033 NZ_CAJZAL010000002.1 Protein Homology CDS 33816 34421 . + 0 ID=cds-WP_176154736.1;Parent=gene-LDO38_RS00295;Dbxref=GenBank:WP_176154736.1;Name=WP_176154736.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350786.1;locus_tag=LDO38_RS00295;product=nitroreductase family protein;protein_id=WP_176154736.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 34702 35952 . + . ID=gene-LDO38_RS00300;Name=LDO38_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00300;old_locus_tag=BVI2075_100034 NZ_CAJZAL010000002.1 Protein Homology CDS 34702 35952 . + 0 ID=cds-WP_045578561.1;Parent=gene-LDO38_RS00300;Dbxref=GenBank:WP_045578561.1;Name=WP_045578561.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414128.1;locus_tag=LDO38_RS00300;product=Hsp70 family protein;protein_id=WP_045578561.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 36075 36278 . - . ID=gene-LDO38_RS00305;Name=LDO38_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00305;old_locus_tag=BVI2075_100035 NZ_CAJZAL010000002.1 Protein Homology CDS 36075 36278 . - 0 ID=cds-WP_006477070.1;Parent=gene-LDO38_RS00305;Dbxref=GenBank:WP_006477070.1;Name=WP_006477070.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196837.1;locus_tag=LDO38_RS00305;product=cold-shock protein;protein_id=WP_006477070.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 36698 38296 . + . ID=gene-LDO38_RS00310;Name=LDO38_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00310;old_locus_tag=BVI2075_100036 NZ_CAJZAL010000002.1 Protein Homology CDS 36698 38296 . + 0 ID=cds-WP_011883129.1;Parent=gene-LDO38_RS00310;Dbxref=GenBank:WP_011883129.1;Name=WP_011883129.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186824.1;locus_tag=LDO38_RS00310;product=APC family permease;protein_id=WP_011883129.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 38403 39194 . - . ID=gene-LDO38_RS00315;Name=LDO38_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00315;old_locus_tag=BVI2075_100037 NZ_CAJZAL010000002.1 Protein Homology CDS 38403 39194 . - 0 ID=cds-WP_011883130.1;Parent=gene-LDO38_RS00315;Dbxref=GenBank:WP_011883130.1;Name=WP_011883130.1;Ontology_term=GO:0008270,GO:0016701,GO:0046872,GO:0051213;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen|0016701||IEA,metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362990.1;locus_tag=LDO38_RS00315;product=DODA-type extradiol aromatic ring-opening family dioxygenase;protein_id=WP_011883130.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 39419 40015 . - . ID=gene-LDO38_RS00320;Name=LDO38_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00320;old_locus_tag=BVI2075_100038 NZ_CAJZAL010000002.1 Protein Homology CDS 39419 40015 . - 0 ID=cds-WP_059475561.1;Parent=gene-LDO38_RS00320;Dbxref=GenBank:WP_059475561.1;Name=WP_059475561.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327818.1;locus_tag=LDO38_RS00320;product=UbiX family flavin prenyltransferase;protein_id=WP_059475561.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 40028 40339 . - . ID=gene-LDO38_RS00325;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=LDO38_RS00325;old_locus_tag=BVI2075_100039 NZ_CAJZAL010000002.1 Protein Homology CDS 40028 40339 . - 0 ID=cds-WP_011883132.1;Parent=gene-LDO38_RS00325;Dbxref=GenBank:WP_011883132.1;Name=WP_011883132.1;Ontology_term=GO:0009055;gbkey=CDS;gene=grxD;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018420101.1;locus_tag=LDO38_RS00325;product=Grx4 family monothiol glutaredoxin;protein_id=WP_011883132.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 40407 41249 . - . ID=gene-LDO38_RS00330;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=LDO38_RS00330;old_locus_tag=BVI2075_100040 NZ_CAJZAL010000002.1 Protein Homology CDS 40407 41249 . - 0 ID=cds-WP_011883133.1;Parent=gene-LDO38_RS00330;Dbxref=GenBank:WP_011883133.1;Name=WP_011883133.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350792.1;locus_tag=LDO38_RS00330;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_011883133.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 41257 42339 . - . ID=gene-LDO38_RS00335;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=LDO38_RS00335;old_locus_tag=BVI2075_100041 NZ_CAJZAL010000002.1 Protein Homology CDS 41257 42339 . - 0 ID=cds-WP_059463882.1;Parent=gene-LDO38_RS00335;Dbxref=GenBank:WP_059463882.1;Name=WP_059463882.1;Ontology_term=GO:0006415,GO:0016149;gbkey=CDS;gene=prfA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883134.1;locus_tag=LDO38_RS00335;product=peptide chain release factor 1;protein_id=WP_059463882.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 42420 43718 . - . ID=gene-LDO38_RS00340;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=LDO38_RS00340;old_locus_tag=BVI2075_100042 NZ_CAJZAL010000002.1 Protein Homology CDS 42420 43718 . - 0 ID=cds-WP_011883135.1;Parent=gene-LDO38_RS00340;Dbxref=GenBank:WP_011883135.1;Name=WP_011883135.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214219.1;locus_tag=LDO38_RS00340;product=glutamyl-tRNA reductase;protein_id=WP_011883135.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 43790 44506 . - . ID=gene-LDO38_RS00345;Name=LDO38_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00345;old_locus_tag=BVI2075_100043 NZ_CAJZAL010000002.1 Protein Homology CDS 43790 44506 . - 0 ID=cds-WP_011883136.1;Parent=gene-LDO38_RS00345;Dbxref=GenBank:WP_011883136.1;Name=WP_011883136.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883136.1;locus_tag=LDO38_RS00345;product=response regulator transcription factor;protein_id=WP_011883136.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 44683 44937 . + . ID=gene-LDO38_RS00350;Name=LDO38_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00350;old_locus_tag=BVI2075_100044 NZ_CAJZAL010000002.1 Protein Homology CDS 44683 44937 . + 0 ID=cds-WP_011883137.1;Parent=gene-LDO38_RS00350;Dbxref=GenBank:WP_011883137.1;Name=WP_011883137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883137.1;locus_tag=LDO38_RS00350;product=hypothetical protein;protein_id=WP_011883137.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 44956 46770 . + . ID=gene-LDO38_RS00355;Name=LDO38_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00355;old_locus_tag=BVI2075_100045 NZ_CAJZAL010000002.1 Protein Homology CDS 44956 46770 . + 0 ID=cds-WP_069246129.1;Parent=gene-LDO38_RS00355;Dbxref=GenBank:WP_069246129.1;Name=WP_069246129.1;Ontology_term=GO:0006508,GO:0004177,GO:0046872,GO:0070006,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aminopeptidase activity|0004177||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106698.1;locus_tag=LDO38_RS00355;product=aminopeptidase P family protein;protein_id=WP_069246129.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 46845 47396 . + . ID=gene-LDO38_RS00360;Name=LDO38_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00360;old_locus_tag=BVI2075_100046 NZ_CAJZAL010000002.1 Protein Homology CDS 46845 47396 . + 0 ID=cds-WP_014722362.1;Parent=gene-LDO38_RS00360;Dbxref=GenBank:WP_014722362.1;Name=WP_014722362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758496.1;locus_tag=LDO38_RS00360;product=isochorismatase family protein;protein_id=WP_014722362.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 47393 48016 . + . ID=gene-LDO38_RS00365;Name=LDO38_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00365;old_locus_tag=BVI2075_100047 NZ_CAJZAL010000002.1 Protein Homology CDS 47393 48016 . + 0 ID=cds-WP_011883140.1;Parent=gene-LDO38_RS00365;Dbxref=GenBank:WP_011883140.1;Name=WP_011883140.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883140.1;locus_tag=LDO38_RS00365;product=HAD family hydrolase;protein_id=WP_011883140.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 48148 49815 . - . ID=gene-LDO38_RS00370;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=LDO38_RS00370;old_locus_tag=BVI2075_100048 NZ_CAJZAL010000002.1 Protein Homology CDS 48148 49815 . - 0 ID=cds-WP_014722364.1;Parent=gene-LDO38_RS00370;Dbxref=GenBank:WP_014722364.1;Name=WP_014722364.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186903.1;locus_tag=LDO38_RS00370;product=energy-dependent translational throttle protein EttA;protein_id=WP_014722364.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 50003 50311 . - . ID=gene-LDO38_RS00375;Name=LDO38_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00375;old_locus_tag=BVI2075_100050 NZ_CAJZAL010000002.1 Protein Homology CDS 50003 50311 . - 0 ID=cds-WP_011883142.1;Parent=gene-LDO38_RS00375;Dbxref=GenBank:WP_011883142.1;Name=WP_011883142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494399.1;locus_tag=LDO38_RS00375;product=DUF3761 domain-containing protein;protein_id=WP_011883142.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 50884 52275 . + . ID=gene-LDO38_RS00380;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=LDO38_RS00380;old_locus_tag=BVI2075_100052 NZ_CAJZAL010000002.1 Protein Homology CDS 50884 52275 . + 0 ID=cds-WP_011883143.1;Parent=gene-LDO38_RS00380;Dbxref=GenBank:WP_011883143.1;Name=WP_011883143.1;Ontology_term=GO:0015812,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=gamma-aminobutyric acid transport|0015812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477053.1;locus_tag=LDO38_RS00380;product=GABA permease;protein_id=WP_011883143.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 52440 53534 . - . ID=gene-LDO38_RS00385;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=LDO38_RS00385;old_locus_tag=BVI2075_100053 NZ_CAJZAL010000002.1 Protein Homology CDS 52440 53534 . - 0 ID=cds-WP_224056135.1;Parent=gene-LDO38_RS00385;Dbxref=GenBank:WP_224056135.1;Name=WP_224056135.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477050.1;locus_tag=LDO38_RS00385;product=redox-regulated ATPase YchF;protein_id=WP_224056135.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 53783 54961 . + . ID=gene-LDO38_RS00390;Name=LDO38_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00390;old_locus_tag=BVI2075_100054 NZ_CAJZAL010000002.1 Protein Homology CDS 53783 54961 . + 0 ID=cds-WP_011883145.1;Parent=gene-LDO38_RS00390;Dbxref=GenBank:WP_011883145.1;Name=WP_011883145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214205.1;locus_tag=LDO38_RS00390;product=UbiH/UbiF family hydroxylase;protein_id=WP_011883145.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 55052 55780 . + . ID=gene-LDO38_RS00395;Name=LDO38_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00395;old_locus_tag=BVI2075_100055 NZ_CAJZAL010000002.1 Protein Homology CDS 55052 55780 . + 0 ID=cds-WP_034193974.1;Parent=gene-LDO38_RS00395;Dbxref=GenBank:WP_034193974.1;Name=WP_034193974.1;Ontology_term=GO:0003756;gbkey=CDS;go_function=protein disulfide isomerase activity|0003756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758486.1;locus_tag=LDO38_RS00395;product=DsbC family protein;protein_id=WP_034193974.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 55896 57695 . + . ID=gene-LDO38_RS00400;Name=LDO38_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00400;old_locus_tag=BVI2075_100056 NZ_CAJZAL010000002.1 Protein Homology CDS 55896 57695 . + 0 ID=cds-WP_011883147.1;Parent=gene-LDO38_RS00400;Dbxref=GenBank:WP_011883147.1;Name=WP_011883147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350810.1;locus_tag=LDO38_RS00400;product=M61 family metallopeptidase;protein_id=WP_011883147.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 57840 58436 . + . ID=gene-LDO38_RS00405;Name=LDO38_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00405;old_locus_tag=BVI2075_100057 NZ_CAJZAL010000002.1 Protein Homology CDS 57840 58436 . + 0 ID=cds-WP_014722373.1;Parent=gene-LDO38_RS00405;Dbxref=GenBank:WP_014722373.1;Name=WP_014722373.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0016491,GO:0050136,GO:0050446;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,azobenzene reductase (NADP+) activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029810.1;locus_tag=LDO38_RS00405;product=FMN-dependent NADH-azoreductase;protein_id=WP_014722373.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 58560 59459 . - . ID=gene-LDO38_RS00410;Name=LDO38_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00410;old_locus_tag=BVI2075_100058 NZ_CAJZAL010000002.1 Protein Homology CDS 58560 59459 . - 0 ID=cds-WP_059567678.1;Parent=gene-LDO38_RS00410;Dbxref=GenBank:WP_059567678.1;Name=WP_059567678.1;Ontology_term=GO:0006281,GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363007.1;locus_tag=LDO38_RS00410;product=uracil-DNA glycosylase;protein_id=WP_059567678.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 59472 60098 . - . ID=gene-LDO38_RS00415;Name=LDO38_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00415;old_locus_tag=BVI2075_100059 NZ_CAJZAL010000002.1 Protein Homology CDS 59472 60098 . - 0 ID=cds-WP_046423543.1;Parent=gene-LDO38_RS00415;Dbxref=GenBank:WP_046423543.1;Name=WP_046423543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363008.1;locus_tag=LDO38_RS00415;product=CYTH domain-containing protein;protein_id=WP_046423543.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 60098 60883 . - . ID=gene-LDO38_RS00420;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=LDO38_RS00420;old_locus_tag=BVI2075_100060 NZ_CAJZAL010000002.1 Protein Homology CDS 60098 60883 . - 0 ID=cds-WP_011883151.1;Parent=gene-LDO38_RS00420;Dbxref=GenBank:WP_011883151.1;Name=WP_011883151.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106662.1;locus_tag=LDO38_RS00420;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_011883151.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 60913 61944 . - . ID=gene-LDO38_RS00425;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=LDO38_RS00425;old_locus_tag=BVI2075_100061 NZ_CAJZAL010000002.1 Protein Homology CDS 60913 61944 . - 0 ID=cds-WP_011883152.1;Parent=gene-LDO38_RS00425;Dbxref=GenBank:WP_011883152.1;Name=WP_011883152.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406908.1;locus_tag=LDO38_RS00425;product=anthranilate phosphoribosyltransferase;protein_id=WP_011883152.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 61958 62557 . - . ID=gene-LDO38_RS00430;Name=LDO38_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00430;old_locus_tag=BVI2075_100062 NZ_CAJZAL010000002.1 Protein Homology CDS 61958 62557 . - 0 ID=cds-WP_011883153.1;Parent=gene-LDO38_RS00430;Dbxref=GenBank:WP_011883153.1;Name=WP_011883153.1;Ontology_term=GO:0000162,GO:0004049,GO:0046820;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA,4-amino-4-deoxychorismate synthase activity|0046820||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898208.1;locus_tag=LDO38_RS00430;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_011883153.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 62571 64064 . - . ID=gene-LDO38_RS00435;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=LDO38_RS00435;old_locus_tag=BVI2075_100063 NZ_CAJZAL010000002.1 Protein Homology CDS 62571 64064 . - 0 ID=cds-WP_011883154.1;Parent=gene-LDO38_RS00435;Dbxref=GenBank:WP_011883154.1;Name=WP_011883154.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020070700.1;locus_tag=LDO38_RS00435;product=anthranilate synthase component I;protein_id=WP_011883154.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 64423 65178 . - . ID=gene-LDO38_RS00440;Name=LDO38_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00440;old_locus_tag=BVI2075_100064 NZ_CAJZAL010000002.1 Protein Homology CDS 64423 65178 . - 0 ID=cds-WP_045578554.1;Parent=gene-LDO38_RS00440;Dbxref=GenBank:WP_045578554.1;Name=WP_045578554.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655874.1;locus_tag=LDO38_RS00440;product=phosphoglycolate phosphatase;protein_id=WP_045578554.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 65183 65869 . - . ID=gene-LDO38_RS00445;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=LDO38_RS00445;old_locus_tag=BVI2075_100065 NZ_CAJZAL010000002.1 Protein Homology CDS 65183 65869 . - 0 ID=cds-WP_011883156.1;Parent=gene-LDO38_RS00445;Dbxref=GenBank:WP_011883156.1;Name=WP_011883156.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883156.1;locus_tag=LDO38_RS00445;product=ribulose-phosphate 3-epimerase;protein_id=WP_011883156.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 66046 66420 . + . ID=gene-LDO38_RS00450;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=LDO38_RS00450;old_locus_tag=BVI2075_100066 NZ_CAJZAL010000002.1 Protein Homology CDS 66046 66420 . + 0 ID=cds-WP_011655875.1;Parent=gene-LDO38_RS00450;Dbxref=GenBank:WP_011655875.1;Name=WP_011655875.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186878.1;locus_tag=LDO38_RS00450;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_011655875.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 66500 67732 . + . ID=gene-LDO38_RS00460;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=LDO38_RS00460;old_locus_tag=BVI2075_100067 NZ_CAJZAL010000002.1 Protein Homology CDS 66500 67732 . + 0 ID=cds-WP_011883158.1;Parent=gene-LDO38_RS00460;Dbxref=GenBank:WP_011883158.1;Name=WP_011883158.1;Ontology_term=GO:0000270,GO:0008933,GO:0030288;gbkey=CDS;gene=mltA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327838.1;locus_tag=LDO38_RS00460;product=murein transglycosylase A;protein_id=WP_011883158.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 67925 69223 . - . ID=gene-LDO38_RS00465;Name=paaK;gbkey=Gene;gene=paaK;gene_biotype=protein_coding;locus_tag=LDO38_RS00465;old_locus_tag=BVI2075_100068 NZ_CAJZAL010000002.1 Protein Homology CDS 67925 69223 . - 0 ID=cds-WP_011883159.1;Parent=gene-LDO38_RS00465;Dbxref=GenBank:WP_011883159.1;Name=WP_011883159.1;Ontology_term=GO:0010124,GO:0047475;gbkey=CDS;gene=paaK;go_function=phenylacetate-CoA ligase activity|0047475||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898201.1;locus_tag=LDO38_RS00465;product=phenylacetate--CoA ligase PaaK;protein_id=WP_011883159.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 69262 69714 . - . ID=gene-LDO38_RS00470;Name=paaI;gbkey=Gene;gene=paaI;gene_biotype=protein_coding;locus_tag=LDO38_RS00470;old_locus_tag=BVI2075_100069 NZ_CAJZAL010000002.1 Protein Homology CDS 69262 69714 . - 0 ID=cds-WP_011883160.1;Parent=gene-LDO38_RS00470;Dbxref=GenBank:WP_011883160.1;Name=WP_011883160.1;Ontology_term=GO:0010124,GO:0016790;gbkey=CDS;gene=paaI;go_function=thiolester hydrolase activity|0016790||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350823.1;locus_tag=LDO38_RS00470;product=hydroxyphenylacetyl-CoA thioesterase PaaI;protein_id=WP_011883160.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 69716 70507 . - . ID=gene-LDO38_RS00475;Name=paaG;gbkey=Gene;gene=paaG;gene_biotype=protein_coding;locus_tag=LDO38_RS00475;old_locus_tag=BVI2075_100070 NZ_CAJZAL010000002.1 Protein Homology CDS 69716 70507 . - 0 ID=cds-WP_014722380.1;Parent=gene-LDO38_RS00475;Dbxref=GenBank:WP_014722380.1;Name=WP_014722380.1;Ontology_term=GO:0010124,GO:0016853;gbkey=CDS;gene=paaG;go_function=isomerase activity|0016853||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029796.1;locus_tag=LDO38_RS00475;product=2-(1%2C2-epoxy-1%2C2-dihydrophenyl)acetyl-CoA isomerase PaaG;protein_id=WP_014722380.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 70553 71755 . - . ID=gene-LDO38_RS00480;Name=pcaF;gbkey=Gene;gene=pcaF;gene_biotype=protein_coding;locus_tag=LDO38_RS00480;old_locus_tag=BVI2075_100071 NZ_CAJZAL010000002.1 Protein Homology CDS 70553 71755 . - 0 ID=cds-WP_059475568.1;Parent=gene-LDO38_RS00480;Dbxref=GenBank:WP_059475568.1;Name=WP_059475568.1;Ontology_term=GO:0019619,GO:0016747;gbkey=CDS;gene=pcaF;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197326.1;locus_tag=LDO38_RS00480;product=3-oxoadipyl-CoA thiolase;protein_id=WP_059475568.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 71852 73558 . - . ID=gene-LDO38_RS00485;Name=paaN;gbkey=Gene;gene=paaN;gene_biotype=protein_coding;locus_tag=LDO38_RS00485;old_locus_tag=BVI2075_100073 NZ_CAJZAL010000002.1 Protein Homology CDS 71852 73558 . - 0 ID=cds-WP_059475569.1;Parent=gene-LDO38_RS00485;Dbxref=GenBank:WP_059475569.1;Name=WP_059475569.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaN;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522008.1;locus_tag=LDO38_RS00485;product=phenylacetic acid degradation protein PaaN;protein_id=WP_059475569.1;transl_table=11 NZ_CAJZAL010000002.1 RefSeq gene 73688 74464 . + . ID=gene-LDO38_RS00490;Name=LDO38_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00490;old_locus_tag=BVI2075_100074 NZ_CAJZAL010000002.1 Protein Homology CDS 73688 74464 . + 0 ID=cds-WP_011883164.1;Parent=gene-LDO38_RS00490;Dbxref=GenBank:WP_011883164.1;Name=WP_011883164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008918651.1;locus_tag=LDO38_RS00490;product=enoyl-CoA hydratase;protein_id=WP_011883164.1;transl_table=11 ##sequence-region NZ_CAJZAL010000003.1 1 10801 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000003.1 RefSeq region 1 10801 . + . ID=NZ_CAJZAL010000003.1:1..10801;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_100 NZ_CAJZAL010000003.1 RefSeq gene 364 1173 . + . ID=gene-LDO38_RS00500;Name=sctT;gbkey=Gene;gene=sctT;gene_biotype=protein_coding;locus_tag=LDO38_RS00500;old_locus_tag=BVI2075_1000002 NZ_CAJZAL010000003.1 Protein Homology CDS 364 1173 . + 0 ID=cds-WP_011882602.1;Parent=gene-LDO38_RS00500;Dbxref=GenBank:WP_011882602.1;Name=WP_011882602.1;Ontology_term=GO:0030254,GO:0016020;gbkey=CDS;gene=sctT;go_component=membrane|0016020||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754499.1;locus_tag=LDO38_RS00500;product=type III secretion system export apparatus subunit SctT;protein_id=WP_011882602.1;transl_table=11 NZ_CAJZAL010000003.1 RefSeq gene 1199 2227 . + . ID=gene-LDO38_RS00505;Name=LDO38_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00505;old_locus_tag=BVI2075_1000003 NZ_CAJZAL010000003.1 Protein Homology CDS 1199 2227 . + 0 ID=cds-WP_011882601.1;Parent=gene-LDO38_RS00505;Dbxref=GenBank:WP_011882601.1;Name=WP_011882601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882601.1;locus_tag=LDO38_RS00505;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;protein_id=WP_011882601.1;transl_table=11 NZ_CAJZAL010000003.1 RefSeq gene 2494 4461 . + . ID=gene-LDO38_RS00510;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=LDO38_RS00510;old_locus_tag=BVI2075_1000004 NZ_CAJZAL010000003.1 Protein Homology CDS 2494 4461 . + 0 ID=cds-WP_059475276.1;Parent=gene-LDO38_RS00510;Dbxref=GenBank:WP_059475276.1;Name=WP_059475276.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725397.1;locus_tag=LDO38_RS00510;product=asparagine synthase (glutamine-hydrolyzing);protein_id=WP_059475276.1;transl_table=11 NZ_CAJZAL010000003.1 RefSeq gene 4558 10801 . - . ID=gene-LDO38_RS00515;Name=LDO38_RS00515;end_range=10801,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00515;old_locus_tag=BVI2075_1000005;partial=true NZ_CAJZAL010000003.1 Protein Homology CDS 4558 10801 . - 1 ID=cds-WP_224056136.1;Parent=gene-LDO38_RS00515;Dbxref=GenBank:WP_224056136.1;Name=WP_224056136.1;end_range=10801,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725396.1;locus_tag=LDO38_RS00515;partial=true;product=LWXIA domain-containing protein;protein_id=WP_224056136.1;transl_table=11 ##sequence-region NZ_CAJZAL010000004.1 1 19832 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000004.1 RefSeq region 1 19832 . + . ID=NZ_CAJZAL010000004.1:1..19832;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_101 NZ_CAJZAL010000004.1 RefSeq pseudogene 1 340 . - . ID=gene-LDO38_RS00520;Name=LDO38_RS00520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS00520;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000004.1 Protein Homology CDS 1 340 . - 0 ID=cds-LDO38_RS00520;Parent=gene-LDO38_RS00520;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498597.1;locus_tag=LDO38_RS00520;partial=true;product=cytochrome c biogenesis protein DipZ;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000004.1 RefSeq gene 378 908 . - . ID=gene-LDO38_RS00525;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=LDO38_RS00525;old_locus_tag=BVI2075_1010002 NZ_CAJZAL010000004.1 Protein Homology CDS 378 908 . - 0 ID=cds-WP_034194340.1;Parent=gene-LDO38_RS00525;Dbxref=GenBank:WP_034194340.1;Name=WP_034194340.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217807.1;locus_tag=LDO38_RS00525;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_034194340.1;transl_table=11 NZ_CAJZAL010000004.1 RefSeq gene 1294 2154 . + . ID=gene-LDO38_RS00530;Name=LDO38_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00530;old_locus_tag=BVI2075_1010003 NZ_CAJZAL010000004.1 Protein Homology CDS 1294 2154 . + 0 ID=cds-WP_045579531.1;Parent=gene-LDO38_RS00530;Dbxref=GenBank:WP_045579531.1;Name=WP_045579531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753459.1;locus_tag=LDO38_RS00530;product=transporter substrate-binding domain-containing protein;protein_id=WP_045579531.1;transl_table=11 NZ_CAJZAL010000004.1 RefSeq gene 2247 2969 . + . ID=gene-LDO38_RS00535;Name=LDO38_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00535;old_locus_tag=BVI2075_1010004 NZ_CAJZAL010000004.1 Protein Homology CDS 2247 2969 . + 0 ID=cds-WP_181709599.1;Parent=gene-LDO38_RS00535;Dbxref=GenBank:WP_181709599.1;Name=WP_181709599.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481063.1;locus_tag=LDO38_RS00535;product=ABC transporter permease;protein_id=WP_181709599.1;transl_table=11 NZ_CAJZAL010000004.1 RefSeq gene 2982 3728 . + . ID=gene-LDO38_RS00540;Name=LDO38_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00540;old_locus_tag=BVI2075_1010005 NZ_CAJZAL010000004.1 Protein Homology CDS 2982 3728 . + 0 ID=cds-WP_046423229.1;Parent=gene-LDO38_RS00540;Dbxref=GenBank:WP_046423229.1;Name=WP_046423229.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337093.1;locus_tag=LDO38_RS00540;product=ABC transporter permease;protein_id=WP_046423229.1;transl_table=11 NZ_CAJZAL010000004.1 RefSeq gene 3756 4547 . + . ID=gene-LDO38_RS00545;Name=LDO38_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00545;old_locus_tag=BVI2075_1010006 NZ_CAJZAL010000004.1 Protein Homology CDS 3756 4547 . + 0 ID=cds-WP_011879720.1;Parent=gene-LDO38_RS00545;Dbxref=GenBank:WP_011879720.1;Name=WP_011879720.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013592029.1;locus_tag=LDO38_RS00545;product=ABC transporter ATP-binding protein;protein_id=WP_011879720.1;transl_table=11 NZ_CAJZAL010000004.1 RefSeq gene 4555 6048 . + . ID=gene-LDO38_RS00550;Name=LDO38_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00550;old_locus_tag=BVI2075_1010007 NZ_CAJZAL010000004.1 Protein Homology CDS 4555 6048 . + 0 ID=cds-WP_124259720.1;Parent=gene-LDO38_RS00550;Dbxref=GenBank:WP_124259720.1;Name=WP_124259720.1;Ontology_term=GO:0009072,GO:0016841;gbkey=CDS;go_function=ammonia-lyase activity|0016841||IEA;go_process=aromatic amino acid metabolic process|0009072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481066.1;locus_tag=LDO38_RS00550;product=aromatic amino acid ammonia-lyase;protein_id=WP_124259720.1;transl_table=11 NZ_CAJZAL010000004.1 RefSeq gene 6093 6848 . + . ID=gene-LDO38_RS00555;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=LDO38_RS00555;old_locus_tag=BVI2075_1010008 NZ_CAJZAL010000004.1 Protein Homology CDS 6093 6848 . + 0 ID=cds-WP_046423227.1;Parent=gene-LDO38_RS00555;Dbxref=GenBank:WP_046423227.1;Name=WP_046423227.1;Ontology_term=GO:0006355,GO:0006547,GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-histidine metabolic process|0006547||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549290.1;locus_tag=LDO38_RS00555;product=histidine utilization repressor;protein_id=WP_046423227.1;transl_table=11 NZ_CAJZAL010000004.1 RefSeq gene 6915 7937 . - . ID=gene-LDO38_RS00560;Name=LDO38_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00560;old_locus_tag=BVI2075_1010009 NZ_CAJZAL010000004.1 Protein Homology CDS 6915 7937 . - 0 ID=cds-WP_059602440.1;Parent=gene-LDO38_RS00560;Dbxref=GenBank:WP_059602440.1;Name=WP_059602440.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725535.1;locus_tag=LDO38_RS00560;product=ABC transporter substrate-binding protein;protein_id=WP_059602440.1;transl_table=11 NZ_CAJZAL010000004.1 cmsearch riboswitch 8077 8198 . - . ID=id-NZ_CAJZAL010000004.1:8077..8198;Dbxref=RFAM:RF00442;Note=guanidine-I (ykkC/yxkD leader) riboswitch%3B Guanidine-I riboswitches control genes whose products are involved in modification or pumping out guanidine as a toxic compound from bacteria%3B This is class of guanidine riboswitches is based on the ykkC/yxkD leader.;bound_moiety=guanidine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAL010000004.1 RefSeq gene 8298 8429 . - . ID=gene-LDO38_RS30040;Name=LDO38_RS30040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30040 NZ_CAJZAL010000004.1 GeneMarkS-2+ CDS 8298 8429 . - 0 ID=cds-WP_257785824.1;Parent=gene-LDO38_RS30040;Dbxref=GenBank:WP_257785824.1;Name=WP_257785824.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30040;product=hypothetical protein;protein_id=WP_257785824.1;transl_table=11 NZ_CAJZAL010000004.1 cmsearch riboswitch 8685 8820 . + . ID=id-NZ_CAJZAL010000004.1:8685..8820;Dbxref=RFAM:RF00442;Note=guanidine-I (ykkC/yxkD leader) riboswitch%3B Guanidine-I riboswitches control genes whose products are involved in modification or pumping out guanidine as a toxic compound from bacteria%3B This is class of guanidine riboswitches is based on the ykkC/yxkD leader.;bound_moiety=guanidine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAL010000004.1 RefSeq gene 8878 9633 . + . ID=gene-LDO38_RS00565;Name=LDO38_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00565;old_locus_tag=BVI2075_1010011 NZ_CAJZAL010000004.1 Protein Homology CDS 8878 9633 . + 0 ID=cds-WP_014725537.1;Parent=gene-LDO38_RS00565;Dbxref=GenBank:WP_014725537.1;Name=WP_014725537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485567.1;locus_tag=LDO38_RS00565;product=urea amidolyase associated protein UAAP1;protein_id=WP_014725537.1;transl_table=11 NZ_CAJZAL010000004.1 RefSeq gene 9645 10301 . + . ID=gene-LDO38_RS00570;Name=LDO38_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00570;old_locus_tag=BVI2075_1010013 NZ_CAJZAL010000004.1 Protein Homology CDS 9645 10301 . + 0 ID=cds-WP_014725538.1;Parent=gene-LDO38_RS00570;Dbxref=GenBank:WP_014725538.1;Name=WP_014725538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012427096.1;locus_tag=LDO38_RS00570;product=urea amidolyase associated protein UAAP2;protein_id=WP_014725538.1;transl_table=11 NZ_CAJZAL010000004.1 RefSeq gene 10453 14133 . + . ID=gene-LDO38_RS00575;Name=uca;gbkey=Gene;gene=uca;gene_biotype=protein_coding;locus_tag=LDO38_RS00575;old_locus_tag=BVI2075_1010015 NZ_CAJZAL010000004.1 Protein Homology CDS 10453 14133 . + 0 ID=cds-WP_224056137.1;Parent=gene-LDO38_RS00575;Dbxref=GenBank:WP_224056137.1;Name=WP_224056137.1;Ontology_term=GO:0019627,GO:0004847;gbkey=CDS;gene=uca;go_function=urea carboxylase activity|0004847||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879726.1;locus_tag=LDO38_RS00575;product=urea carboxylase;protein_id=WP_224056137.1;transl_table=11 NZ_CAJZAL010000004.1 RefSeq gene 14130 16010 . + . ID=gene-LDO38_RS00580;Name=atzF;gbkey=Gene;gene=atzF;gene_biotype=protein_coding;locus_tag=LDO38_RS00580;old_locus_tag=BVI2075_1010016 NZ_CAJZAL010000004.1 Protein Homology CDS 14130 16010 . + 0 ID=cds-WP_059895884.1;Parent=gene-LDO38_RS00580;Dbxref=GenBank:WP_059895884.1;Name=WP_059895884.1;Ontology_term=GO:0019627,GO:0004039;gbkey=CDS;gene=atzF;go_function=allophanate hydrolase activity|0004039||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498064.1;locus_tag=LDO38_RS00580;product=allophanate hydrolase;protein_id=WP_059895884.1;transl_table=11 NZ_CAJZAL010000004.1 RefSeq gene 16074 17048 . + . ID=gene-LDO38_RS00585;Name=LDO38_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00585;old_locus_tag=BVI2075_1010017 NZ_CAJZAL010000004.1 Protein Homology CDS 16074 17048 . + 0 ID=cds-WP_011879728.1;Parent=gene-LDO38_RS00585;Dbxref=GenBank:WP_011879728.1;Name=WP_011879728.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485545.1;locus_tag=LDO38_RS00585;product=ABC transporter permease;protein_id=WP_011879728.1;transl_table=11 NZ_CAJZAL010000004.1 RefSeq gene 17094 18005 . + . ID=gene-LDO38_RS00590;Name=LDO38_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00590;old_locus_tag=BVI2075_1010018 NZ_CAJZAL010000004.1 Protein Homology CDS 17094 18005 . + 0 ID=cds-WP_224056138.1;Parent=gene-LDO38_RS00590;Dbxref=GenBank:WP_224056138.1;Name=WP_224056138.1;Ontology_term=GO:0006810,GO:0005215,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549110.1;locus_tag=LDO38_RS00590;product=ABC transporter ATP-binding protein;protein_id=WP_224056138.1;transl_table=11 NZ_CAJZAL010000004.1 RefSeq gene 18981 19832 . + . ID=gene-LDO38_RS00595;Name=LDO38_RS00595;end_range=19832,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00595;partial=true NZ_CAJZAL010000004.1 Protein Homology CDS 18981 19832 . + 0 ID=cds-WP_224056139.1;Parent=gene-LDO38_RS00595;Dbxref=GenBank:WP_224056139.1;Name=WP_224056139.1;Ontology_term=GO:0003824,GO:0030976;end_range=19832,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725543.1;locus_tag=LDO38_RS00595;partial=true;product=acetolactate synthase large subunit;protein_id=WP_224056139.1;transl_table=11 ##sequence-region NZ_CAJZAL010000005.1 1 27966 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000005.1 RefSeq region 1 27966 . + . ID=NZ_CAJZAL010000005.1:1..27966;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_102 NZ_CAJZAL010000005.1 RefSeq gene 263 1558 . + . ID=gene-LDO38_RS00600;Name=LDO38_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00600;old_locus_tag=BVI2075_1020001 NZ_CAJZAL010000005.1 Protein Homology CDS 263 1558 . + 0 ID=cds-WP_014725687.1;Parent=gene-LDO38_RS00600;Dbxref=GenBank:WP_014725687.1;Name=WP_014725687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397982.1;locus_tag=LDO38_RS00600;product=MFS transporter;protein_id=WP_014725687.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 1623 2405 . + . ID=gene-LDO38_RS00605;Name=LDO38_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00605;old_locus_tag=BVI2075_1020002 NZ_CAJZAL010000005.1 Protein Homology CDS 1623 2405 . + 0 ID=cds-WP_059459647.1;Parent=gene-LDO38_RS00605;Dbxref=GenBank:WP_059459647.1;Name=WP_059459647.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725686.1;locus_tag=LDO38_RS00605;product=substrate-binding domain-containing protein;protein_id=WP_059459647.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 2499 3791 . - . ID=gene-LDO38_RS00610;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=LDO38_RS00610;old_locus_tag=BVI2075_1020003 NZ_CAJZAL010000005.1 Protein Homology CDS 2499 3791 . - 0 ID=cds-WP_081053385.1;Parent=gene-LDO38_RS00610;Dbxref=GenBank:WP_081053385.1;Name=WP_081053385.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=dctA;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725685.1;locus_tag=LDO38_RS00610;product=C4-dicarboxylate transporter DctA;protein_id=WP_081053385.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 3874 4797 . - . ID=gene-LDO38_RS00615;Name=LDO38_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00615;old_locus_tag=BVI2075_1020004 NZ_CAJZAL010000005.1 Protein Homology CDS 3874 4797 . - 0 ID=cds-WP_014725684.1;Parent=gene-LDO38_RS00615;Dbxref=GenBank:WP_014725684.1;Name=WP_014725684.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416809.1;locus_tag=LDO38_RS00615;product=LysR family transcriptional regulator;protein_id=WP_014725684.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 4994 5443 . - . ID=gene-LDO38_RS00620;Name=LDO38_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00620;old_locus_tag=BVI2075_1020005 NZ_CAJZAL010000005.1 Protein Homology CDS 4994 5443 . - 0 ID=cds-WP_059456176.1;Parent=gene-LDO38_RS00620;Dbxref=GenBank:WP_059456176.1;Name=WP_059456176.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008922684.1;locus_tag=LDO38_RS00620;product=response regulator;protein_id=WP_059456176.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 5658 6377 . + . ID=gene-LDO38_RS00625;Name=LDO38_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00625;old_locus_tag=BVI2075_1020006 NZ_CAJZAL010000005.1 Protein Homology CDS 5658 6377 . + 0 ID=cds-WP_014725682.1;Parent=gene-LDO38_RS00625;Dbxref=GenBank:WP_014725682.1;Name=WP_014725682.1;Note=This protein belongs to the uracil DNA glycosylase superfamily%2C members of which act in excision repair of DNA. However%2C it belongs more specifically to UdgX branch%2C whose founding member was found to bind uracil in DNA (where it does not belong)%2C without cleaving it%2C appears to promote DNA repair by a pathway involving RecA%2C rather than base excision.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725682.1;locus_tag=LDO38_RS00625;product=UdgX family uracil-DNA binding protein;protein_id=WP_014725682.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 6374 7705 . + . ID=gene-LDO38_RS00630;Name=LDO38_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00630;old_locus_tag=BVI2075_1020007 NZ_CAJZAL010000005.1 Protein Homology CDS 6374 7705 . + 0 ID=cds-WP_224056140.1;Parent=gene-LDO38_RS00630;Dbxref=GenBank:WP_224056140.1;Name=WP_224056140.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217884.1;locus_tag=LDO38_RS00630;product=Nramp family divalent metal transporter;protein_id=WP_224056140.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 7875 8216 . - . ID=gene-LDO38_RS00635;Name=LDO38_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00635;old_locus_tag=BVI2075_1020008 NZ_CAJZAL010000005.1 Protein Homology CDS 7875 8216 . - 0 ID=cds-WP_034192851.1;Parent=gene-LDO38_RS00635;Dbxref=GenBank:WP_034192851.1;Name=WP_034192851.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011465339.1;locus_tag=LDO38_RS00635;product=helix-turn-helix domain-containing protein;protein_id=WP_034192851.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 8575 9186 . - . ID=gene-LDO38_RS00640;Name=LDO38_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00640;old_locus_tag=BVI2075_1020009 NZ_CAJZAL010000005.1 Protein Homology CDS 8575 9186 . - 0 ID=cds-WP_011879861.1;Parent=gene-LDO38_RS00640;Dbxref=GenBank:WP_011879861.1;Name=WP_011879861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879861.1;locus_tag=LDO38_RS00640;product=DUF892 family protein;protein_id=WP_011879861.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 9246 9857 . - . ID=gene-LDO38_RS00645;Name=LDO38_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00645;old_locus_tag=BVI2075_1020010 NZ_CAJZAL010000005.1 Protein Homology CDS 9246 9857 . - 0 ID=cds-WP_059897167.1;Parent=gene-LDO38_RS00645;Dbxref=GenBank:WP_059897167.1;Name=WP_059897167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398919.1;locus_tag=LDO38_RS00645;product=DUF4142 domain-containing protein;protein_id=WP_059897167.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 9885 10742 . - . ID=gene-LDO38_RS00650;Name=LDO38_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00650;old_locus_tag=BVI2075_1020011 NZ_CAJZAL010000005.1 Protein Homology CDS 9885 10742 . - 0 ID=cds-WP_014725678.1;Parent=gene-LDO38_RS00650;Dbxref=GenBank:WP_014725678.1;Name=WP_014725678.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545572.1;locus_tag=LDO38_RS00650;product=SDR family oxidoreductase;protein_id=WP_014725678.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 10893 11459 . - . ID=gene-LDO38_RS00655;Name=LDO38_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00655;old_locus_tag=BVI2075_1020012 NZ_CAJZAL010000005.1 Protein Homology CDS 10893 11459 . - 0 ID=cds-WP_011879858.1;Parent=gene-LDO38_RS00655;Dbxref=GenBank:WP_011879858.1;Name=WP_011879858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761068.1;locus_tag=LDO38_RS00655;product=membrane protein;protein_id=WP_011879858.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 11524 11823 . - . ID=gene-LDO38_RS00660;Name=LDO38_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00660;old_locus_tag=BVI2075_1020013 NZ_CAJZAL010000005.1 Protein Homology CDS 11524 11823 . - 0 ID=cds-WP_014725677.1;Parent=gene-LDO38_RS00660;Dbxref=GenBank:WP_014725677.1;Name=WP_014725677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498358.1;locus_tag=LDO38_RS00660;product=DUF2795 domain-containing protein;protein_id=WP_014725677.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 11862 12890 . - . ID=gene-LDO38_RS00665;Name=LDO38_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00665;old_locus_tag=BVI2075_1020014 NZ_CAJZAL010000005.1 Protein Homology CDS 11862 12890 . - 0 ID=cds-WP_212173597.1;Parent=gene-LDO38_RS00665;Dbxref=GenBank:WP_212173597.1;Name=WP_212173597.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407427.1;locus_tag=LDO38_RS00665;product=SDR family oxidoreductase;protein_id=WP_212173597.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 12916 13317 . - . ID=gene-LDO38_RS00670;Name=LDO38_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00670;old_locus_tag=BVI2075_1020015 NZ_CAJZAL010000005.1 Protein Homology CDS 12916 13317 . - 0 ID=cds-WP_034192855.1;Parent=gene-LDO38_RS00670;Dbxref=GenBank:WP_034192855.1;Name=WP_034192855.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398914.1;locus_tag=LDO38_RS00670;product=BON domain-containing protein;protein_id=WP_034192855.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 13560 14873 . + . ID=gene-LDO38_RS00675;Name=LDO38_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00675;old_locus_tag=BVI2075_1020016 NZ_CAJZAL010000005.1 Protein Homology CDS 13560 14873 . + 0 ID=cds-WP_176300303.1;Parent=gene-LDO38_RS00675;Dbxref=GenBank:WP_176300303.1;Name=WP_176300303.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761072.1;locus_tag=LDO38_RS00675;product=glycosyltransferase family 4 protein;protein_id=WP_176300303.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 14873 15919 . + . ID=gene-LDO38_RS00680;Name=LDO38_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00680;old_locus_tag=BVI2075_1020017 NZ_CAJZAL010000005.1 Protein Homology CDS 14873 15919 . + 0 ID=cds-WP_176043307.1;Parent=gene-LDO38_RS00680;Dbxref=GenBank:WP_176043307.1;Name=WP_176043307.1;Ontology_term=GO:0042732,GO:0048040,GO:0070403;gbkey=CDS;go_function=UDP-glucuronate decarboxylase activity|0048040||IEA,NAD+ binding|0070403||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004555217.1;locus_tag=LDO38_RS00680;product=UDP-glucuronic acid decarboxylase family protein;protein_id=WP_176043307.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 15952 18252 . - . ID=gene-LDO38_RS00685;Name=LDO38_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00685;old_locus_tag=BVI2075_1020018 NZ_CAJZAL010000005.1 Protein Homology CDS 15952 18252 . - 0 ID=cds-WP_224056141.1;Parent=gene-LDO38_RS00685;Dbxref=GenBank:WP_224056141.1;Name=WP_224056141.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498364.1;locus_tag=LDO38_RS00685;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_224056141.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 18390 19097 . + . ID=gene-LDO38_RS00690;Name=LDO38_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00690;old_locus_tag=BVI2075_1020019 NZ_CAJZAL010000005.1 Protein Homology CDS 18390 19097 . + 0 ID=cds-WP_224056142.1;Parent=gene-LDO38_RS00690;Dbxref=GenBank:WP_224056142.1;Name=WP_224056142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879851.1;locus_tag=LDO38_RS00690;product=PIG-L family deacetylase;protein_id=WP_224056142.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 19076 19993 . + . ID=gene-LDO38_RS00695;Name=LDO38_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00695;old_locus_tag=BVI2075_1020020 NZ_CAJZAL010000005.1 Protein Homology CDS 19076 19993 . + 0 ID=cds-WP_224056143.1;Parent=gene-LDO38_RS00695;Dbxref=GenBank:WP_224056143.1;Name=WP_224056143.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725670.1;locus_tag=LDO38_RS00695;product=glycosyltransferase family 2 protein;protein_id=WP_224056143.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 20011 21378 . - . ID=gene-LDO38_RS00700;Name=LDO38_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00700;old_locus_tag=BVI2075_1020021 NZ_CAJZAL010000005.1 Protein Homology CDS 20011 21378 . - 0 ID=cds-WP_011879849.1;Parent=gene-LDO38_RS00700;Dbxref=GenBank:WP_011879849.1;Name=WP_011879849.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677,GO:0005524;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660547.1;locus_tag=LDO38_RS00700;product=sigma-54-dependent transcriptional regulator;protein_id=WP_011879849.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 21722 22801 . + . ID=gene-LDO38_RS00705;Name=LDO38_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00705;old_locus_tag=BVI2075_1020023 NZ_CAJZAL010000005.1 Protein Homology CDS 21722 22801 . + 0 ID=cds-WP_059463691.1;Parent=gene-LDO38_RS00705;Dbxref=GenBank:WP_059463691.1;Name=WP_059463691.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725669.1;locus_tag=LDO38_RS00705;product=sigma-54 interaction domain-containing protein;protein_id=WP_059463691.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 22811 23761 . - . ID=gene-LDO38_RS00710;Name=LDO38_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00710;old_locus_tag=BVI2075_1020024 NZ_CAJZAL010000005.1 Protein Homology CDS 22811 23761 . - 0 ID=cds-WP_014725668.1;Parent=gene-LDO38_RS00710;Dbxref=GenBank:WP_014725668.1;Name=WP_014725668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553965.1;locus_tag=LDO38_RS00710;product=glycosyltransferase;protein_id=WP_014725668.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 23751 24827 . - . ID=gene-LDO38_RS00715;Name=LDO38_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00715;old_locus_tag=BVI2075_1020025 NZ_CAJZAL010000005.1 Protein Homology CDS 23751 24827 . - 0 ID=cds-WP_034192861.1;Parent=gene-LDO38_RS00715;Dbxref=GenBank:WP_034192861.1;Name=WP_034192861.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725667.1;locus_tag=LDO38_RS00715;product=glycosyltransferase family 9 protein;protein_id=WP_034192861.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 24824 25825 . - . ID=gene-LDO38_RS00720;Name=LDO38_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00720;old_locus_tag=BVI2075_1020026 NZ_CAJZAL010000005.1 Protein Homology CDS 24824 25825 . - 0 ID=cds-WP_224056144.1;Parent=gene-LDO38_RS00720;Dbxref=GenBank:WP_224056144.1;Name=WP_224056144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725666.1;locus_tag=LDO38_RS00720;product=glycosyltransferase family 2 protein;protein_id=WP_224056144.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 25812 27569 . - . ID=gene-LDO38_RS00725;Name=LDO38_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00725;old_locus_tag=BVI2075_1020027 NZ_CAJZAL010000005.1 Protein Homology CDS 25812 27569 . - 0 ID=cds-WP_034192863.1;Parent=gene-LDO38_RS00725;Dbxref=GenBank:WP_034192863.1;Name=WP_034192863.1;Ontology_term=GO:0000166,GO:0016743,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725665.1;locus_tag=LDO38_RS00725;product=carbamoyltransferase family protein;protein_id=WP_034192863.1;transl_table=11 NZ_CAJZAL010000005.1 RefSeq gene 27573 27966 . - . ID=gene-LDO38_RS00730;Name=LDO38_RS00730;end_range=27966,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00730;old_locus_tag=BVI2075_1020028;partial=true NZ_CAJZAL010000005.1 Protein Homology CDS 27573 27966 . - 1 ID=cds-WP_290371149.1;Parent=gene-LDO38_RS00730;Dbxref=GenBank:WP_290371149.1;Name=WP_290371149.1;Ontology_term=GO:0016757;end_range=27966,.;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188399.1;locus_tag=LDO38_RS00730;partial=true;product=glycosyltransferase family 9 protein;protein_id=WP_290371149.1;transl_table=11 ##sequence-region NZ_CAJZAL010000006.1 1 41548 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000006.1 RefSeq region 1 41548 . + . ID=NZ_CAJZAL010000006.1:1..41548;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_103 NZ_CAJZAL010000006.1 RefSeq pseudogene 1 426 . + . ID=gene-LDO38_RS00735;Name=LDO38_RS00735;end_range=426,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS00735;old_locus_tag=BVI2075_1030001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000006.1 Protein Homology CDS 1 426 . + 0 ID=cds-LDO38_RS00735;Parent=gene-LDO38_RS00735;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=426,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549680.1;locus_tag=LDO38_RS00735;partial=true;product=DNA polymerase III subunit gamma/tau;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq pseudogene 437 610 . + . ID=gene-LDO38_RS30240;Name=LDO38_RS30240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30240;partial=true;pseudo=true;start_range=.,437 NZ_CAJZAL010000006.1 Protein Homology CDS 437 610 . + 0 ID=cds-LDO38_RS30240;Parent=gene-LDO38_RS30240;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549680.1;locus_tag=LDO38_RS30240;partial=true;product=DNA polymerase III subunit gamma/tau C-terminal domain-containing protein;pseudo=true;start_range=.,437;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 725 1051 . + . ID=gene-LDO38_RS00740;Name=LDO38_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00740;old_locus_tag=BVI2075_1030002 NZ_CAJZAL010000006.1 Protein Homology CDS 725 1051 . + 0 ID=cds-WP_006755698.1;Parent=gene-LDO38_RS00740;Dbxref=GenBank:WP_006755698.1;Name=WP_006755698.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006048866.1;locus_tag=LDO38_RS00740;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_006755698.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 1092 1688 . + . ID=gene-LDO38_RS00745;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=LDO38_RS00745;old_locus_tag=BVI2075_1030003 NZ_CAJZAL010000006.1 Protein Homology CDS 1092 1688 . + 0 ID=cds-WP_011884980.1;Parent=gene-LDO38_RS00745;Dbxref=GenBank:WP_011884980.1;Name=WP_011884980.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875477.1;locus_tag=LDO38_RS00745;product=recombination mediator RecR;protein_id=WP_011884980.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 1737 2942 . + . ID=gene-LDO38_RS00750;Name=LDO38_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00750;old_locus_tag=BVI2075_1030004 NZ_CAJZAL010000006.1 Protein Homology CDS 1737 2942 . + 0 ID=cds-WP_011884979.1;Parent=gene-LDO38_RS00750;Dbxref=GenBank:WP_011884979.1;Name=WP_011884979.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191282.1;locus_tag=LDO38_RS00750;product=CaiB/BaiF CoA transferase family protein;protein_id=WP_011884979.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 3198 3959 . + . ID=gene-LDO38_RS00755;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=LDO38_RS00755;old_locus_tag=BVI2075_1030006 NZ_CAJZAL010000006.1 Protein Homology CDS 3198 3959 . + 0 ID=cds-WP_011884978.1;Parent=gene-LDO38_RS00755;Dbxref=GenBank:WP_011884978.1;Name=WP_011884978.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011488250.1;locus_tag=LDO38_RS00755;product=5'/3'-nucleotidase SurE;protein_id=WP_011884978.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 3956 4885 . + . ID=gene-LDO38_RS00760;Name=LDO38_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00760;old_locus_tag=BVI2075_1030005 NZ_CAJZAL010000006.1 Protein Homology CDS 3956 4885 . + 0 ID=cds-WP_011884977.1;Parent=gene-LDO38_RS00760;Dbxref=GenBank:WP_011884977.1;Name=WP_011884977.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352272.1;locus_tag=LDO38_RS00760;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_011884977.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 4891 5772 . + . ID=gene-LDO38_RS00765;Name=LDO38_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00765;old_locus_tag=BVI2075_1030007 NZ_CAJZAL010000006.1 Protein Homology CDS 4891 5772 . + 0 ID=cds-WP_059460795.1;Parent=gene-LDO38_RS00765;Dbxref=GenBank:WP_059460795.1;Name=WP_059460795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478669.1;locus_tag=LDO38_RS00765;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_059460795.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 5784 6869 . + . ID=gene-LDO38_RS00770;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=LDO38_RS00770;old_locus_tag=BVI2075_1030008 NZ_CAJZAL010000006.1 Protein Homology CDS 5784 6869 . + 0 ID=cds-WP_014723105.1;Parent=gene-LDO38_RS00770;Dbxref=GenBank:WP_014723105.1;Name=WP_014723105.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193640.1;locus_tag=LDO38_RS00770;product=RNA polymerase sigma factor RpoS;protein_id=WP_014723105.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 6873 7649 . + . ID=gene-LDO38_RS00775;Name=LDO38_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00775;old_locus_tag=BVI2075_1030009 NZ_CAJZAL010000006.1 Protein Homology CDS 6873 7649 . + 0 ID=cds-WP_011884974.1;Parent=gene-LDO38_RS00775;Dbxref=GenBank:WP_011884974.1;Name=WP_011884974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851735.1;locus_tag=LDO38_RS00775;product=3'-5' exonuclease;protein_id=WP_011884974.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 7689 8543 . - . ID=gene-LDO38_RS00780;Name=LDO38_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00780;old_locus_tag=BVI2075_1030010 NZ_CAJZAL010000006.1 Protein Homology CDS 7689 8543 . - 0 ID=cds-WP_045579056.1;Parent=gene-LDO38_RS00780;Dbxref=GenBank:WP_045579056.1;Name=WP_045579056.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723104.1;locus_tag=LDO38_RS00780;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_045579056.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 8804 10108 . + . ID=gene-LDO38_RS00785;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=LDO38_RS00785;old_locus_tag=BVI2075_1030011 NZ_CAJZAL010000006.1 Protein Homology CDS 8804 10108 . + 0 ID=cds-WP_034195427.1;Parent=gene-LDO38_RS00785;Dbxref=GenBank:WP_034195427.1;Name=WP_034195427.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723103.1;locus_tag=LDO38_RS00785;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_034195427.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 10172 10870 . - . ID=gene-LDO38_RS00790;Name=LDO38_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00790;old_locus_tag=BVI2075_1030012 NZ_CAJZAL010000006.1 Protein Homology CDS 10172 10870 . - 0 ID=cds-WP_011884971.1;Parent=gene-LDO38_RS00790;Dbxref=GenBank:WP_011884971.1;Name=WP_011884971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698250.1;locus_tag=LDO38_RS00790;product=Bax inhibitor-1/YccA family protein;protein_id=WP_011884971.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 11121 11546 . + . ID=gene-LDO38_RS00795;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=LDO38_RS00795;old_locus_tag=BVI2075_1030013 NZ_CAJZAL010000006.1 Protein Homology CDS 11121 11546 . + 0 ID=cds-WP_006478674.1;Parent=gene-LDO38_RS00795;Dbxref=GenBank:WP_006478674.1;Name=WP_006478674.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012433533.1;locus_tag=LDO38_RS00795;product=nucleoside-diphosphate kinase;protein_id=WP_006478674.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 11602 12741 . + . ID=gene-LDO38_RS00800;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=LDO38_RS00800;old_locus_tag=BVI2075_1030014 NZ_CAJZAL010000006.1 Protein Homology CDS 11602 12741 . + 0 ID=cds-WP_011884970.1;Parent=gene-LDO38_RS00800;Dbxref=GenBank:WP_011884970.1;Name=WP_011884970.1;Ontology_term=GO:0030488,GO:0070475,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=tRNA methylation|0030488||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012433532.1;locus_tag=LDO38_RS00800;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_011884970.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 12904 13929 . + . ID=gene-LDO38_RS00805;Name=LDO38_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00805;old_locus_tag=BVI2075_1030015 NZ_CAJZAL010000006.1 Protein Homology CDS 12904 13929 . + 0 ID=cds-WP_014723102.1;Parent=gene-LDO38_RS00805;Dbxref=GenBank:WP_014723102.1;Name=WP_014723102.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496411.1;locus_tag=LDO38_RS00805;product=helix-turn-helix domain-containing protein;protein_id=WP_014723102.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 14034 15332 . + . ID=gene-LDO38_RS00810;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=LDO38_RS00810;old_locus_tag=BVI2075_1030016 NZ_CAJZAL010000006.1 Protein Homology CDS 14034 15332 . + 0 ID=cds-WP_034195407.1;Parent=gene-LDO38_RS00810;Dbxref=GenBank:WP_034195407.1;Name=WP_034195407.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483314.1;locus_tag=LDO38_RS00810;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_034195407.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 15357 16697 . + . ID=gene-LDO38_RS00815;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=LDO38_RS00815;old_locus_tag=BVI2075_1030017 NZ_CAJZAL010000006.1 Protein Homology CDS 15357 16697 . + 0 ID=cds-WP_059460794.1;Parent=gene-LDO38_RS00815;Dbxref=GenBank:WP_059460794.1;Name=WP_059460794.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764216.1;locus_tag=LDO38_RS00815;product=histidine--tRNA ligase;protein_id=WP_059460794.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 16753 17382 . + . ID=gene-LDO38_RS00820;Name=LDO38_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00820;old_locus_tag=BVI2075_1030018 NZ_CAJZAL010000006.1 Protein Homology CDS 16753 17382 . + 0 ID=cds-WP_011884966.1;Parent=gene-LDO38_RS00820;Dbxref=GenBank:WP_011884966.1;Name=WP_011884966.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890825.1;locus_tag=LDO38_RS00820;product=tetratricopeptide repeat protein;protein_id=WP_011884966.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 17423 18568 . + . ID=gene-LDO38_RS00825;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=LDO38_RS00825;old_locus_tag=BVI2075_1030019 NZ_CAJZAL010000006.1 Protein Homology CDS 17423 18568 . + 0 ID=cds-WP_011884965.1;Parent=gene-LDO38_RS00825;Dbxref=GenBank:WP_011884965.1;Name=WP_011884965.1;Ontology_term=GO:0005515,GO:0009279;gbkey=CDS;gene=bamB;go_component=cell outer membrane|0009279||IEA;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875493.1;locus_tag=LDO38_RS00825;product=outer membrane protein assembly factor BamB;protein_id=WP_011884965.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 18818 20155 . + . ID=gene-LDO38_RS00830;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=LDO38_RS00830;old_locus_tag=BVI2075_1030020 NZ_CAJZAL010000006.1 Protein Homology CDS 18818 20155 . + 0 ID=cds-WP_011884964.1;Parent=gene-LDO38_RS00830;Dbxref=GenBank:WP_011884964.1;Name=WP_011884964.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006051314.1;locus_tag=LDO38_RS00830;product=ribosome biogenesis GTPase Der;protein_id=WP_011884964.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 20309 20548 . + . ID=gene-LDO38_RS00835;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=LDO38_RS00835;old_locus_tag=BVI2075_1030021 NZ_CAJZAL010000006.1 Protein Homology CDS 20309 20548 . + 0 ID=cds-WP_006399927.1;Parent=gene-LDO38_RS00835;Dbxref=GenBank:WP_006399927.1;Name=WP_006399927.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399927.1;locus_tag=LDO38_RS00835;product=RNA chaperone Hfq;protein_id=WP_006399927.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 20621 21796 . + . ID=gene-LDO38_RS00840;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=LDO38_RS00840;old_locus_tag=BVI2075_1030022 NZ_CAJZAL010000006.1 Protein Homology CDS 20621 21796 . + 0 ID=cds-WP_174479794.1;Parent=gene-LDO38_RS00840;Dbxref=GenBank:WP_174479794.1;Name=WP_174479794.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521337.1;locus_tag=LDO38_RS00840;product=GTPase HflX;protein_id=WP_174479794.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 21844 23205 . + . ID=gene-LDO38_RS00845;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=LDO38_RS00845;old_locus_tag=BVI2075_1030023 NZ_CAJZAL010000006.1 Protein Homology CDS 21844 23205 . + 0 ID=cds-WP_011884962.1;Parent=gene-LDO38_RS00845;Dbxref=GenBank:WP_011884962.1;Name=WP_011884962.1;Ontology_term=GO:0045861,GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;go_process=negative regulation of proteolysis|0045861||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404714.1;locus_tag=LDO38_RS00845;product=FtsH protease activity modulator HflK;protein_id=WP_011884962.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 23220 24119 . + . ID=gene-LDO38_RS00850;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=LDO38_RS00850;old_locus_tag=BVI2075_1030024 NZ_CAJZAL010000006.1 Protein Homology CDS 23220 24119 . + 0 ID=cds-WP_059460792.1;Parent=gene-LDO38_RS00850;Dbxref=GenBank:WP_059460792.1;Name=WP_059460792.1;Ontology_term=GO:0052547,GO:0016020,GO:0098797;gbkey=CDS;gene=hflC;go_component=membrane|0016020||IEA,plasma membrane protein complex|0098797||IEA;go_process=regulation of peptidase activity|0052547||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896916.1;locus_tag=LDO38_RS00850;product=protease modulator HflC;protein_id=WP_059460792.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 24158 24349 . + . ID=gene-LDO38_RS00855;Name=LDO38_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00855;old_locus_tag=BVI2075_1030025 NZ_CAJZAL010000006.1 Protein Homology CDS 24158 24349 . + 0 ID=cds-WP_011884960.1;Parent=gene-LDO38_RS00855;Dbxref=GenBank:WP_011884960.1;Name=WP_011884960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009973312.1;locus_tag=LDO38_RS00855;product=DUF2065 domain-containing protein;protein_id=WP_011884960.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 24456 25604 . + . ID=gene-LDO38_RS00860;Name=LDO38_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00860;old_locus_tag=BVI2075_1030026 NZ_CAJZAL010000006.1 Protein Homology CDS 24456 25604 . + 0 ID=cds-WP_011884959.1;Parent=gene-LDO38_RS00860;Dbxref=GenBank:WP_011884959.1;Name=WP_011884959.1;Ontology_term=GO:0000105;gbkey=CDS;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192327.1;locus_tag=LDO38_RS00860;product=ATP phosphoribosyltransferase regulatory subunit;protein_id=WP_011884959.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 25718 27064 . + . ID=gene-LDO38_RS00865;Name=LDO38_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00865;old_locus_tag=BVI2075_1030027 NZ_CAJZAL010000006.1 Protein Homology CDS 25718 27064 . + 0 ID=cds-WP_011884958.1;Parent=gene-LDO38_RS00865;Dbxref=GenBank:WP_011884958.1;Name=WP_011884958.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193462.1;locus_tag=LDO38_RS00865;product=adenylosuccinate synthase;protein_id=WP_011884958.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 27072 27668 . + . ID=gene-LDO38_RS00870;Name=LDO38_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00870;old_locus_tag=BVI2075_1030028 NZ_CAJZAL010000006.1 Protein Homology CDS 27072 27668 . + 0 ID=cds-WP_014723093.1;Parent=gene-LDO38_RS00870;Dbxref=GenBank:WP_014723093.1;Name=WP_014723093.1;Ontology_term=GO:0006144,GO:0106130;gbkey=CDS;go_function=purine phosphoribosyltransferase activity|0106130||IEA;go_process=purine nucleobase metabolic process|0006144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478688.1;locus_tag=LDO38_RS00870;product=phosphoribosyltransferase;protein_id=WP_014723093.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 27965 29878 . + . ID=gene-LDO38_RS00875;Name=LDO38_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00875;old_locus_tag=BVI2075_1030029 NZ_CAJZAL010000006.1 Protein Homology CDS 27965 29878 . + 0 ID=cds-WP_011884956.1;Parent=gene-LDO38_RS00875;Dbxref=GenBank:WP_011884956.1;Name=WP_011884956.1;Ontology_term=GO:0071805,GO:0015079,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transmembrane transport|0071805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478689.1;locus_tag=LDO38_RS00875;product=potassium transporter Kup;protein_id=WP_011884956.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 30267 32594 . - . ID=gene-LDO38_RS00880;Name=LDO38_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00880;old_locus_tag=BVI2075_1030031 NZ_CAJZAL010000006.1 Protein Homology CDS 30267 32594 . - 0 ID=cds-WP_034195410.1;Parent=gene-LDO38_RS00880;Dbxref=GenBank:WP_034195410.1;Name=WP_034195410.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352249.1;locus_tag=LDO38_RS00880;product=Tex family protein;protein_id=WP_034195410.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 32755 33507 . + . ID=gene-LDO38_RS00885;Name=LDO38_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00885;old_locus_tag=BVI2075_1030032 NZ_CAJZAL010000006.1 Protein Homology CDS 32755 33507 . + 0 ID=cds-WP_124259648.1;Parent=gene-LDO38_RS00885;Dbxref=GenBank:WP_124259648.1;Name=WP_124259648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478691.1;locus_tag=LDO38_RS00885;product=hypothetical protein;protein_id=WP_124259648.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 33585 33800 . + . ID=gene-LDO38_RS00890;Name=LDO38_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00890;old_locus_tag=BVI2075_1030033 NZ_CAJZAL010000006.1 Protein Homology CDS 33585 33800 . + 0 ID=cds-WP_011884953.1;Parent=gene-LDO38_RS00890;Dbxref=GenBank:WP_011884953.1;Name=WP_011884953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010103275.1;locus_tag=LDO38_RS00890;product=YdcH family protein;protein_id=WP_011884953.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 33856 36105 . + . ID=gene-LDO38_RS00895;Name=LDO38_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00895;old_locus_tag=BVI2075_1030034 NZ_CAJZAL010000006.1 Protein Homology CDS 33856 36105 . + 0 ID=cds-WP_059991394.1;Parent=gene-LDO38_RS00895;Dbxref=GenBank:WP_059991394.1;Name=WP_059991394.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328619.1;locus_tag=LDO38_RS00895;product=ATP-dependent DNA helicase;protein_id=WP_059991394.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 36188 37012 . - . ID=gene-LDO38_RS00900;Name=LDO38_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00900;old_locus_tag=BVI2075_1030035 NZ_CAJZAL010000006.1 Protein Homology CDS 36188 37012 . - 0 ID=cds-WP_011884951.1;Parent=gene-LDO38_RS00900;Dbxref=GenBank:WP_011884951.1;Name=WP_011884951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026946.1;locus_tag=LDO38_RS00900;product=outer membrane protein assembly factor BamD;protein_id=WP_011884951.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 37054 38259 . + . ID=gene-LDO38_RS00905;Name=LDO38_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00905;old_locus_tag=BVI2075_1030036 NZ_CAJZAL010000006.1 Protein Homology CDS 37054 38259 . + 0 ID=cds-WP_034195412.1;Parent=gene-LDO38_RS00905;Dbxref=GenBank:WP_034195412.1;Name=WP_034195412.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600828.1;locus_tag=LDO38_RS00905;product=RluA family pseudouridine synthase;protein_id=WP_034195412.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 38266 39105 . + . ID=gene-LDO38_RS00910;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=LDO38_RS00910;old_locus_tag=BVI2075_1030037 NZ_CAJZAL010000006.1 Protein Homology CDS 38266 39105 . + 0 ID=cds-WP_011884949.1;Parent=gene-LDO38_RS00910;Dbxref=GenBank:WP_011884949.1;Name=WP_011884949.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549701.1;locus_tag=LDO38_RS00910;product=peptidoglycan editing factor PgeF;protein_id=WP_011884949.1;transl_table=11 NZ_CAJZAL010000006.1 RefSeq gene 39471 41345 . + . ID=gene-LDO38_RS00915;Name=phaC;gbkey=Gene;gene=phaC;gene_biotype=protein_coding;locus_tag=LDO38_RS00915;old_locus_tag=BVI2075_1030039 NZ_CAJZAL010000006.1 Protein Homology CDS 39471 41345 . + 0 ID=cds-WP_124259649.1;Parent=gene-LDO38_RS00915;Dbxref=GenBank:WP_124259649.1;Name=WP_124259649.1;Ontology_term=GO:0042619,GO:0016746,GO:0005737;gbkey=CDS;gene=phaC;go_component=cytoplasm|0005737||IEA;go_function=acyltransferase activity|0016746||IEA;go_process=poly-hydroxybutyrate biosynthetic process|0042619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549702.1;locus_tag=LDO38_RS00915;product=class I poly(R)-hydroxyalkanoic acid synthase;protein_id=WP_124259649.1;transl_table=11 ##sequence-region NZ_CAJZAL010000007.1 1 3946 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000007.1 RefSeq region 1 3946 . + . ID=NZ_CAJZAL010000007.1:1..3946;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_104 NZ_CAJZAL010000007.1 RefSeq gene 1 3803 . - . ID=gene-LDO38_RS00920;Name=LDO38_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00920;partial=true;start_range=.,1 NZ_CAJZAL010000007.1 Protein Homology CDS 1 3803 . - 0 ID=cds-WP_224056145.1;Parent=gene-LDO38_RS00920;Dbxref=GenBank:WP_224056145.1;Name=WP_224056145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882599.1;locus_tag=LDO38_RS00920;partial=true;product=DUF4781 domain-containing protein;protein_id=WP_224056145.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAL010000008.1 1 5207 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000008.1 RefSeq region 1 5207 . + . ID=NZ_CAJZAL010000008.1:1..5207;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_105 NZ_CAJZAL010000008.1 RefSeq gene 5 117 . - . ID=gene-LDO38_RS00925;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LDO38_RS00925;old_locus_tag=BVI2075_RRNA3 NZ_CAJZAL010000008.1 cmsearch rRNA 5 117 . - . ID=rna-LDO38_RS00925;Parent=gene-LDO38_RS00925;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO38_RS00925;product=5S ribosomal RNA NZ_CAJZAL010000008.1 cmsearch exon 5 117 . - . ID=exon-LDO38_RS00925-1;Parent=rna-LDO38_RS00925;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO38_RS00925;product=5S ribosomal RNA NZ_CAJZAL010000008.1 RefSeq gene 272 3153 . - . ID=gene-LDO38_RS00930;Name=LDO38_RS00930;gbkey=Gene;gene_biotype=rRNA;locus_tag=LDO38_RS00930;old_locus_tag=BVI2075_RRNA1 NZ_CAJZAL010000008.1 cmsearch rRNA 272 3153 . - . ID=rna-LDO38_RS00930;Parent=gene-LDO38_RS00930;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO38_RS00930;product=23S ribosomal RNA NZ_CAJZAL010000008.1 cmsearch exon 272 3153 . - . ID=exon-LDO38_RS00930-1;Parent=rna-LDO38_RS00930;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO38_RS00930;product=23S ribosomal RNA NZ_CAJZAL010000008.1 RefSeq gene 3238 3313 . - . ID=gene-LDO38_RS00935;Name=LDO38_RS00935;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS00935;old_locus_tag=BVI2075_TRNA33 NZ_CAJZAL010000008.1 tRNAscan-SE tRNA 3238 3313 . - . ID=rna-LDO38_RS00935;Parent=gene-LDO38_RS00935;anticodon=(pos:complement(3278..3280));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS00935;product=tRNA-Ala NZ_CAJZAL010000008.1 tRNAscan-SE exon 3238 3313 . - . ID=exon-LDO38_RS00935-1;Parent=rna-LDO38_RS00935;anticodon=(pos:complement(3278..3280));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS00935;product=tRNA-Ala NZ_CAJZAL010000008.1 RefSeq gene 3352 3428 . - . ID=gene-LDO38_RS00940;Name=LDO38_RS00940;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS00940;old_locus_tag=BVI2075_TRNA32 NZ_CAJZAL010000008.1 tRNAscan-SE tRNA 3352 3428 . - . ID=rna-LDO38_RS00940;Parent=gene-LDO38_RS00940;anticodon=(pos:complement(3392..3394));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS00940;product=tRNA-Ile NZ_CAJZAL010000008.1 tRNAscan-SE exon 3352 3428 . - . ID=exon-LDO38_RS00940-1;Parent=rna-LDO38_RS00940;anticodon=(pos:complement(3392..3394));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS00940;product=tRNA-Ile NZ_CAJZAL010000008.1 RefSeq gene 3492 5024 . - . ID=gene-LDO38_RS00945;Name=LDO38_RS00945;gbkey=Gene;gene_biotype=rRNA;locus_tag=LDO38_RS00945;old_locus_tag=BVI2075_RRNA2 NZ_CAJZAL010000008.1 cmsearch rRNA 3492 5024 . - . ID=rna-LDO38_RS00945;Parent=gene-LDO38_RS00945;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO38_RS00945;product=16S ribosomal RNA NZ_CAJZAL010000008.1 cmsearch exon 3492 5024 . - . ID=exon-LDO38_RS00945-1;Parent=rna-LDO38_RS00945;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO38_RS00945;product=16S ribosomal RNA ##sequence-region NZ_CAJZAL010000009.1 1 19995 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000009.1 RefSeq region 1 19995 . + . ID=NZ_CAJZAL010000009.1:1..19995;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_106 NZ_CAJZAL010000009.1 RefSeq gene 88 804 . - . ID=gene-LDO38_RS00955;Name=imuA;gbkey=Gene;gene=imuA;gene_biotype=protein_coding;locus_tag=LDO38_RS00955;old_locus_tag=BVI2075_1060002 NZ_CAJZAL010000009.1 Protein Homology CDS 88 804 . - 0 ID=cds-WP_011875564.1;Parent=gene-LDO38_RS00955;Dbxref=GenBank:WP_011875564.1;Name=WP_011875564.1;Ontology_term=GO:0009432,GO:0051782;gbkey=CDS;gene=imuA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875564.1;locus_tag=LDO38_RS00955;product=translesion DNA synthesis-associated protein ImuA;protein_id=WP_011875564.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 1226 1537 . + . ID=gene-LDO38_RS00960;Name=LDO38_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00960 NZ_CAJZAL010000009.1 Protein Homology CDS 1226 1537 . + 0 ID=cds-WP_011875565.1;Parent=gene-LDO38_RS00960;Dbxref=GenBank:WP_011875565.1;Name=WP_011875565.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875565.1;locus_tag=LDO38_RS00960;product=winged helix-turn-helix domain-containing protein;protein_id=WP_011875565.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 1630 1863 . - . ID=gene-LDO38_RS00965;Name=LDO38_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00965 NZ_CAJZAL010000009.1 GeneMarkS-2+ CDS 1630 1863 . - 0 ID=cds-WP_224056146.1;Parent=gene-LDO38_RS00965;Dbxref=GenBank:WP_224056146.1;Name=WP_224056146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS00965;product=hypothetical protein;protein_id=WP_224056146.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 2088 2414 . - . ID=gene-LDO38_RS00970;Name=LDO38_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00970 NZ_CAJZAL010000009.1 GeneMarkS-2+ CDS 2088 2414 . - 0 ID=cds-WP_155632435.1;Parent=gene-LDO38_RS00970;Dbxref=GenBank:WP_155632435.1;Name=WP_155632435.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS00970;product=hypothetical protein;protein_id=WP_155632435.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 2415 2681 . - . ID=gene-LDO38_RS00975;Name=LDO38_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00975 NZ_CAJZAL010000009.1 GeneMarkS-2+ CDS 2415 2681 . - 0 ID=cds-WP_174479797.1;Parent=gene-LDO38_RS00975;Dbxref=GenBank:WP_174479797.1;Name=WP_174479797.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS00975;product=hypothetical protein;protein_id=WP_174479797.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 2695 2895 . - . ID=gene-LDO38_RS00980;Name=LDO38_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00980 NZ_CAJZAL010000009.1 GeneMarkS-2+ CDS 2695 2895 . - 0 ID=cds-WP_059567273.1;Parent=gene-LDO38_RS00980;Dbxref=GenBank:WP_059567273.1;Name=WP_059567273.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS00980;product=hypothetical protein;protein_id=WP_059567273.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 2899 3117 . - . ID=gene-LDO38_RS00985;Name=LDO38_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00985;old_locus_tag=BVI2075_1060007 NZ_CAJZAL010000009.1 GeneMarkS-2+ CDS 2899 3117 . - 0 ID=cds-WP_144410684.1;Parent=gene-LDO38_RS00985;Dbxref=GenBank:WP_144410684.1;Name=WP_144410684.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS00985;product=hypothetical protein;protein_id=WP_144410684.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 3125 3355 . - . ID=gene-LDO38_RS00990;Name=LDO38_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00990;old_locus_tag=BVI2075_1060008 NZ_CAJZAL010000009.1 Protein Homology CDS 3125 3355 . - 0 ID=cds-WP_012464914.1;Parent=gene-LDO38_RS00990;Dbxref=GenBank:WP_012464914.1;Name=WP_012464914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012464914.1;locus_tag=LDO38_RS00990;product=hypothetical protein;protein_id=WP_012464914.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 3405 3848 . - . ID=gene-LDO38_RS00995;Name=LDO38_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS00995;old_locus_tag=BVI2075_1060009 NZ_CAJZAL010000009.1 GeneMarkS-2+ CDS 3405 3848 . - 0 ID=cds-WP_144410683.1;Parent=gene-LDO38_RS00995;Dbxref=GenBank:WP_144410683.1;Name=WP_144410683.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS00995;product=hypothetical protein;protein_id=WP_144410683.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 3858 4082 . - . ID=gene-LDO38_RS01000;Name=LDO38_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01000;old_locus_tag=BVI2075_1060010 NZ_CAJZAL010000009.1 Protein Homology CDS 3858 4082 . - 0 ID=cds-WP_045579702.1;Parent=gene-LDO38_RS01000;Dbxref=GenBank:WP_045579702.1;Name=WP_045579702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020203543.1;locus_tag=LDO38_RS01000;product=hypothetical protein;protein_id=WP_045579702.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 4125 4400 . - . ID=gene-LDO38_RS01005;Name=LDO38_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01005;old_locus_tag=BVI2075_1060011 NZ_CAJZAL010000009.1 Protein Homology CDS 4125 4400 . - 0 ID=cds-WP_080938775.1;Parent=gene-LDO38_RS01005;Dbxref=GenBank:WP_080938775.1;Name=WP_080938775.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: protein motif:HMM:NF015639.6;locus_tag=LDO38_RS01005;product=YkgJ family cysteine cluster protein;protein_id=WP_080938775.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 4418 4630 . - . ID=gene-LDO38_RS01010;Name=LDO38_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01010;old_locus_tag=BVI2075_1060012 NZ_CAJZAL010000009.1 GeneMarkS-2+ CDS 4418 4630 . - 0 ID=cds-WP_045579701.1;Parent=gene-LDO38_RS01010;Dbxref=GenBank:WP_045579701.1;Name=WP_045579701.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS01010;product=hypothetical protein;protein_id=WP_045579701.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 4674 4820 . - . ID=gene-LDO38_RS01015;Name=LDO38_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01015 NZ_CAJZAL010000009.1 GeneMarkS-2+ CDS 4674 4820 . - 0 ID=cds-WP_224056147.1;Parent=gene-LDO38_RS01015;Dbxref=GenBank:WP_224056147.1;Name=WP_224056147.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS01015;product=hypothetical protein;protein_id=WP_224056147.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 4840 5055 . - . ID=gene-LDO38_RS01020;Name=LDO38_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01020;old_locus_tag=BVI2075_1060013 NZ_CAJZAL010000009.1 GeneMarkS-2+ CDS 4840 5055 . - 0 ID=cds-WP_144410682.1;Parent=gene-LDO38_RS01020;Dbxref=GenBank:WP_144410682.1;Name=WP_144410682.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS01020;product=hypothetical protein;protein_id=WP_144410682.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 5363 5677 . - . ID=gene-LDO38_RS01025;Name=LDO38_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01025;old_locus_tag=BVI2075_1060014 NZ_CAJZAL010000009.1 GeneMarkS-2+ CDS 5363 5677 . - 0 ID=cds-WP_045579699.1;Parent=gene-LDO38_RS01025;Dbxref=GenBank:WP_045579699.1;Name=WP_045579699.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS01025;product=hypothetical protein;protein_id=WP_045579699.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 5677 5820 . - . ID=gene-LDO38_RS01030;Name=LDO38_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01030;old_locus_tag=BVI2075_1060015 NZ_CAJZAL010000009.1 GeneMarkS-2+ CDS 5677 5820 . - 0 ID=cds-WP_224056148.1;Parent=gene-LDO38_RS01030;Dbxref=GenBank:WP_224056148.1;Name=WP_224056148.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS01030;product=hypothetical protein;protein_id=WP_224056148.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 6087 6413 . + . ID=gene-LDO38_RS01035;Name=LDO38_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01035;old_locus_tag=BVI2075_1060016 NZ_CAJZAL010000009.1 Protein Homology CDS 6087 6413 . + 0 ID=cds-WP_059567974.1;Parent=gene-LDO38_RS01035;Dbxref=GenBank:WP_059567974.1;Name=WP_059567974.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012464905.1;locus_tag=LDO38_RS01035;product=H-NS histone family protein;protein_id=WP_059567974.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 6544 7455 . + . ID=gene-LDO38_RS01040;Name=LDO38_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01040;old_locus_tag=BVI2075_1060017 NZ_CAJZAL010000009.1 Protein Homology CDS 6544 7455 . + 0 ID=cds-WP_224056149.1;Parent=gene-LDO38_RS01040;Dbxref=GenBank:WP_224056149.1;Name=WP_224056149.1;Ontology_term=GO:0006974,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011695131.1;locus_tag=LDO38_RS01040;product=SOS response-associated peptidase family protein;protein_id=WP_224056149.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 8100 9050 . + . ID=gene-LDO38_RS01050;Name=LDO38_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01050;old_locus_tag=BVI2075_1060018 NZ_CAJZAL010000009.1 Protein Homology CDS 8100 9050 . + 0 ID=cds-WP_059474760.1;Parent=gene-LDO38_RS01050;Dbxref=GenBank:WP_059474760.1;Name=WP_059474760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218049.1;locus_tag=LDO38_RS01050;product=DNA-binding protein;protein_id=WP_059474760.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 9093 10565 . + . ID=gene-LDO38_RS01055;Name=LDO38_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01055;old_locus_tag=BVI2075_1060019 NZ_CAJZAL010000009.1 Protein Homology CDS 9093 10565 . + 0 ID=cds-WP_059474761.1;Parent=gene-LDO38_RS01055;Dbxref=GenBank:WP_059474761.1;Name=WP_059474761.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218050.1;locus_tag=LDO38_RS01055;product=tyrosine-type recombinase/integrase;protein_id=WP_059474761.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 10943 11212 . + . ID=gene-LDO38_RS01060;Name=LDO38_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01060;old_locus_tag=BVI2075_1060020 NZ_CAJZAL010000009.1 GeneMarkS-2+ CDS 10943 11212 . + 0 ID=cds-WP_059474762.1;Parent=gene-LDO38_RS01060;Dbxref=GenBank:WP_059474762.1;Name=WP_059474762.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS01060;product=hypothetical protein;protein_id=WP_059474762.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 11192 12301 . - . ID=gene-LDO38_RS01065;Name=LDO38_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01065;old_locus_tag=BVI2075_1060021 NZ_CAJZAL010000009.1 Protein Homology CDS 11192 12301 . - 0 ID=cds-WP_059474763.1;Parent=gene-LDO38_RS01065;Dbxref=GenBank:WP_059474763.1;Name=WP_059474763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218051.1;locus_tag=LDO38_RS01065;product=ArsO family NAD(P)H-dependent flavin-containing monooxygenase;protein_id=WP_059474763.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 12320 12730 . - . ID=gene-LDO38_RS01070;Name=LDO38_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01070;old_locus_tag=BVI2075_1060022 NZ_CAJZAL010000009.1 Protein Homology CDS 12320 12730 . - 0 ID=cds-WP_012218052.1;Parent=gene-LDO38_RS01070;Dbxref=GenBank:WP_012218052.1;Name=WP_012218052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218052.1;locus_tag=LDO38_RS01070;product=DUF2703 domain-containing protein;protein_id=WP_012218052.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 12750 14513 . - . ID=gene-LDO38_RS01075;Name=arsA;gbkey=Gene;gene=arsA;gene_biotype=protein_coding;locus_tag=LDO38_RS01075;old_locus_tag=BVI2075_1060023 NZ_CAJZAL010000009.1 Protein Homology CDS 12750 14513 . - 0 ID=cds-WP_012218053.1;Parent=gene-LDO38_RS01075;Dbxref=GenBank:WP_012218053.1;Name=WP_012218053.1;Ontology_term=GO:0071722,GO:0005524,GO:0015446,GO:0016887;gbkey=CDS;gene=arsA;go_function=ATP binding|0005524||IEA,ATPase-coupled arsenite transmembrane transporter activity|0015446||IEA,ATP hydrolysis activity|0016887||IEA;go_process=detoxification of arsenic-containing substance|0071722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017233481.1;locus_tag=LDO38_RS01075;product=arsenical pump-driving ATPase;protein_id=WP_012218053.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 14523 14891 . - . ID=gene-LDO38_RS01080;Name=arsD;gbkey=Gene;gene=arsD;gene_biotype=protein_coding;locus_tag=LDO38_RS01080;old_locus_tag=BVI2075_1060024 NZ_CAJZAL010000009.1 Protein Homology CDS 14523 14891 . - 0 ID=cds-WP_059474764.1;Parent=gene-LDO38_RS01080;Dbxref=GenBank:WP_059474764.1;Name=WP_059474764.1;Ontology_term=GO:0046685,GO:0003677;gbkey=CDS;gene=arsD;go_function=DNA binding|0003677||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218054.1;locus_tag=LDO38_RS01080;product=arsenite efflux transporter metallochaperone ArsD;protein_id=WP_059474764.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 15060 15797 . - . ID=gene-LDO38_RS01085;Name=arsH;gbkey=Gene;gene=arsH;gene_biotype=protein_coding;locus_tag=LDO38_RS01085;old_locus_tag=BVI2075_1060025 NZ_CAJZAL010000009.1 Protein Homology CDS 15060 15797 . - 0 ID=cds-WP_081056090.1;Parent=gene-LDO38_RS01085;Dbxref=GenBank:WP_081056090.1;Name=WP_081056090.1;Ontology_term=GO:0046685;gbkey=CDS;gene=arsH;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012211085.1;locus_tag=LDO38_RS01085;product=arsenical resistance protein ArsH;protein_id=WP_081056090.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 15775 16197 . - . ID=gene-LDO38_RS01090;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=LDO38_RS01090;old_locus_tag=BVI2075_1060026 NZ_CAJZAL010000009.1 Protein Homology CDS 15775 16197 . - 0 ID=cds-WP_059474766.1;Parent=gene-LDO38_RS01090;Dbxref=GenBank:WP_059474766.1;Name=WP_059474766.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009523256.1;locus_tag=LDO38_RS01090;product=arsenate reductase (glutaredoxin);protein_id=WP_059474766.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 16218 17288 . - . ID=gene-LDO38_RS01095;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=LDO38_RS01095;old_locus_tag=BVI2075_1060027 NZ_CAJZAL010000009.1 Protein Homology CDS 16218 17288 . - 0 ID=cds-WP_059474767.1;Parent=gene-LDO38_RS01095;Dbxref=GenBank:WP_059474767.1;Name=WP_059474767.1;Ontology_term=GO:0015700,GO:0046685,GO:0008490,GO:0015103,GO:0015297,GO:0016020;gbkey=CDS;gene=arsB;go_component=membrane|0016020||IEA;go_function=arsenite secondary active transmembrane transporter activity|0008490||IEA,inorganic anion transmembrane transporter activity|0015103||IEA,antiporter activity|0015297||IEA;go_process=arsenite transport|0015700||IEA,response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009899828.1;locus_tag=LDO38_RS01095;product=ACR3 family arsenite efflux transporter;protein_id=WP_059474767.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 17364 17858 . - . ID=gene-LDO38_RS01100;Name=LDO38_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01100;old_locus_tag=BVI2075_1060028 NZ_CAJZAL010000009.1 Protein Homology CDS 17364 17858 . - 0 ID=cds-WP_059474768.1;Parent=gene-LDO38_RS01100;Dbxref=GenBank:WP_059474768.1;Name=WP_059474768.1;Ontology_term=GO:0046685,GO:0004725,GO:0030612;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA,arsenate reductase (thioredoxin) activity|0030612||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525399.1;locus_tag=LDO38_RS01100;product=arsenate reductase ArsC;protein_id=WP_059474768.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 17869 18363 . - . ID=gene-LDO38_RS01105;Name=LDO38_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01105;old_locus_tag=BVI2075_1060029 NZ_CAJZAL010000009.1 Protein Homology CDS 17869 18363 . - 0 ID=cds-WP_059474769.1;Parent=gene-LDO38_RS01105;Dbxref=GenBank:WP_059474769.1;Name=WP_059474769.1;Ontology_term=GO:0046685,GO:0004725,GO:0030612;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA,arsenate reductase (thioredoxin) activity|0030612||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012435825.1;locus_tag=LDO38_RS01105;product=arsenate reductase ArsC;protein_id=WP_059474769.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 18373 18576 . - . ID=gene-LDO38_RS01110;Name=LDO38_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01110 NZ_CAJZAL010000009.1 GeneMarkS-2+ CDS 18373 18576 . - 0 ID=cds-WP_155625209.1;Parent=gene-LDO38_RS01110;Dbxref=GenBank:WP_155625209.1;Name=WP_155625209.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS01110;product=hypothetical protein;protein_id=WP_155625209.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 18573 18914 . - . ID=gene-LDO38_RS01115;Name=LDO38_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01115;old_locus_tag=BVI2075_1060030 NZ_CAJZAL010000009.1 Protein Homology CDS 18573 18914 . - 0 ID=cds-WP_059474770.1;Parent=gene-LDO38_RS01115;Dbxref=GenBank:WP_059474770.1;Name=WP_059474770.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218060.1;locus_tag=LDO38_RS01115;product=ArsR/SmtB family transcription factor;protein_id=WP_059474770.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 19103 19465 . - . ID=gene-LDO38_RS01120;Name=LDO38_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01120;old_locus_tag=BVI2075_1060031 NZ_CAJZAL010000009.1 Protein Homology CDS 19103 19465 . - 0 ID=cds-WP_059474771.1;Parent=gene-LDO38_RS01120;Dbxref=GenBank:WP_059474771.1;Name=WP_059474771.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012464910.1;locus_tag=LDO38_RS01120;product=ArsR/SmtB family transcription factor;protein_id=WP_059474771.1;transl_table=11 NZ_CAJZAL010000009.1 RefSeq gene 19677 19979 . + . ID=gene-LDO38_RS01125;Name=LDO38_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01125;old_locus_tag=BVI2075_1060032 NZ_CAJZAL010000009.1 Protein Homology CDS 19677 19979 . + 0 ID=cds-WP_224056150.1;Parent=gene-LDO38_RS01125;Dbxref=GenBank:WP_224056150.1;Name=WP_224056150.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024257.6;locus_tag=LDO38_RS01125;product=substrate-binding domain-containing protein;protein_id=WP_224056150.1;transl_table=11 ##sequence-region NZ_CAJZAL010000010.1 1 2580 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000010.1 RefSeq region 1 2580 . + . ID=NZ_CAJZAL010000010.1:1..2580;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_107 NZ_CAJZAL010000010.1 RefSeq pseudogene 1 198 . + . ID=gene-LDO38_RS01130;Name=LDO38_RS01130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS01130;old_locus_tag=BVI2075_1070001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000010.1 Protein Homology CDS 1 198 . + 0 ID=cds-LDO38_RS01130;Parent=gene-LDO38_RS01130;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722181.1;locus_tag=LDO38_RS01130;partial=true;product=TetR/AcrR family transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000010.1 RefSeq gene 426 1580 . + . ID=gene-LDO38_RS01135;Name=LDO38_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01135;old_locus_tag=BVI2075_1070002 NZ_CAJZAL010000010.1 Protein Homology CDS 426 1580 . + 0 ID=cds-WP_059741155.1;Parent=gene-LDO38_RS01135;Dbxref=GenBank:WP_059741155.1;Name=WP_059741155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327613.1;locus_tag=LDO38_RS01135;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_059741155.1;transl_table=11 NZ_CAJZAL010000010.1 RefSeq gene 1696 2484 . + . ID=gene-LDO38_RS01140;Name=LDO38_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01140;old_locus_tag=BVI2075_1070003 NZ_CAJZAL010000010.1 Protein Homology CDS 1696 2484 . + 0 ID=cds-WP_046425455.1;Parent=gene-LDO38_RS01140;Dbxref=GenBank:WP_046425455.1;Name=WP_046425455.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477297.1;locus_tag=LDO38_RS01140;product=ABC transporter substrate-binding protein;protein_id=WP_046425455.1;transl_table=11 ##sequence-region NZ_CAJZAL010000011.1 1 3709 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000011.1 RefSeq region 1 3709 . + . ID=NZ_CAJZAL010000011.1:1..3709;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_108 NZ_CAJZAL010000011.1 RefSeq gene 1 677 . + . ID=gene-LDO38_RS01145;Name=LDO38_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01145;old_locus_tag=BVI2075_1080001;partial=true;start_range=.,1 NZ_CAJZAL010000011.1 Protein Homology CDS 1 677 . + 2 ID=cds-WP_224056151.1;Parent=gene-LDO38_RS01145;Dbxref=GenBank:WP_224056151.1;Name=WP_224056151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881332.1;locus_tag=LDO38_RS01145;partial=true;product=hypothetical protein;protein_id=WP_224056151.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000011.1 RefSeq gene 674 922 . + . ID=gene-LDO38_RS01150;Name=LDO38_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01150;old_locus_tag=BVI2075_1080002 NZ_CAJZAL010000011.1 GeneMarkS-2+ CDS 674 922 . + 0 ID=cds-WP_059623052.1;Parent=gene-LDO38_RS01150;Dbxref=GenBank:WP_059623052.1;Name=WP_059623052.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS01150;product=hypothetical protein;protein_id=WP_059623052.1;transl_table=11 NZ_CAJZAL010000011.1 RefSeq gene 1147 3405 . + . ID=gene-LDO38_RS01155;Name=LDO38_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01155;old_locus_tag=BVI2075_1080003 NZ_CAJZAL010000011.1 Protein Homology CDS 1147 3405 . + 0 ID=cds-WP_196773732.1;Parent=gene-LDO38_RS01155;Dbxref=GenBank:WP_196773732.1;Name=WP_196773732.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024755.6;locus_tag=LDO38_RS01155;product=toprim domain-containing protein;protein_id=WP_196773732.1;transl_table=11 ##sequence-region NZ_CAJZAL010000012.1 1 1217 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000012.1 RefSeq region 1 1217 . + . ID=NZ_CAJZAL010000012.1:1..1217;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_109 NZ_CAJZAL010000012.1 RefSeq pseudogene 1 1217 . - . ID=gene-LDO38_RS01160;Name=LDO38_RS01160;end_range=1217,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS01160;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000012.1 Protein Homology CDS 1 1217 . - 0 ID=cds-LDO38_RS01160;Parent=gene-LDO38_RS01160;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1217,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881332.1;locus_tag=LDO38_RS01160;partial=true;product=hemagglutinin repeat-containing protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAL010000013.1 1 167169 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000013.1 RefSeq region 1 167169 . + . ID=NZ_CAJZAL010000013.1:1..167169;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_11 NZ_CAJZAL010000013.1 RefSeq gene 3 1631 . + . ID=gene-LDO38_RS01165;Name=LDO38_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01165;old_locus_tag=BVI2075_110001 NZ_CAJZAL010000013.1 Protein Homology CDS 3 1631 . + 0 ID=cds-WP_224056152.1;Parent=gene-LDO38_RS01165;Dbxref=GenBank:WP_224056152.1;Name=WP_224056152.1;Ontology_term=GO:0022900,GO:0004174,GO:0046872,GO:0051539;gbkey=CDS;go_function=electron-transferring-flavoprotein dehydrogenase activity|0004174||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008920083.1;locus_tag=LDO38_RS01165;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=WP_224056152.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 1680 2873 . + . ID=gene-LDO38_RS01170;Name=bktB;gbkey=Gene;gene=bktB;gene_biotype=protein_coding;locus_tag=LDO38_RS01170;old_locus_tag=BVI2075_110003 NZ_CAJZAL010000013.1 Protein Homology CDS 1680 2873 . + 0 ID=cds-WP_059579271.1;Parent=gene-LDO38_RS01170;Dbxref=GenBank:WP_059579271.1;Name=WP_059579271.1;Ontology_term=GO:0003985;gbkey=CDS;gene=bktB;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337245.1;locus_tag=LDO38_RS01170;product=beta-ketothiolase BktB;protein_id=WP_059579271.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 2913 3779 . + . ID=gene-LDO38_RS01175;Name=LDO38_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01175;old_locus_tag=BVI2075_110005 NZ_CAJZAL010000013.1 Protein Homology CDS 2913 3779 . + 0 ID=cds-WP_224056153.1;Parent=gene-LDO38_RS01175;Dbxref=GenBank:WP_224056153.1;Name=WP_224056153.1;Ontology_term=GO:0006631;gbkey=CDS;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337246.1;locus_tag=LDO38_RS01175;product=3-hydroxybutyryl-CoA dehydrogenase;protein_id=WP_224056153.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 3908 5089 . + . ID=gene-LDO38_RS01180;Name=LDO38_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01180;old_locus_tag=BVI2075_110004 NZ_CAJZAL010000013.1 Protein Homology CDS 3908 5089 . + 0 ID=cds-WP_224056154.1;Parent=gene-LDO38_RS01180;Dbxref=GenBank:WP_224056154.1;Name=WP_224056154.1;Ontology_term=GO:0005975,GO:0016857,GO:0030246;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879794.1;locus_tag=LDO38_RS01180;product=aldose epimerase family protein;protein_id=WP_224056154.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq pseudogene 5170 5361 . - . ID=gene-LDO38_RS30020;Name=LDO38_RS30020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30020;partial=true;pseudo=true;start_range=.,5170 NZ_CAJZAL010000013.1 Protein Homology CDS 5170 5361 . - 0 ID=cds-LDO38_RS30020;Parent=gene-LDO38_RS30020;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017723.6;locus_tag=LDO38_RS30020;partial=true;product=hypothetical protein;pseudo=true;start_range=.,5170;transl_table=11 NZ_CAJZAL010000013.1 RefSeq pseudogene 5516 6899 . - . ID=gene-LDO38_RS01190;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=pseudogene;locus_tag=LDO38_RS01190;old_locus_tag=BVI2075_110008;pseudo=true NZ_CAJZAL010000013.1 Protein Homology CDS 5516 6899 . - 0 ID=cds-LDO38_RS01190;Parent=gene-LDO38_RS01190;Note=frameshifted%3B internal stop;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:NF017730.6;locus_tag=LDO38_RS01190;product=type VI secretion system contractile sheath large subunit;pseudo=true;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 7124 9589 . + . ID=gene-LDO38_RS01195;Name=LDO38_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01195;old_locus_tag=BVI2075_110010 NZ_CAJZAL010000013.1 Protein Homology CDS 7124 9589 . + 0 ID=cds-WP_014725608.1;Parent=gene-LDO38_RS01195;Dbxref=GenBank:WP_014725608.1;Name=WP_014725608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725608.1;locus_tag=LDO38_RS01195;product=DUF2345 domain-containing protein;protein_id=WP_014725608.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 9604 10415 . - . ID=gene-LDO38_RS01200;Name=LDO38_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01200;old_locus_tag=BVI2075_110011 NZ_CAJZAL010000013.1 Protein Homology CDS 10076 10415 . - 0 ID=cds-WP_224056155.1;Parent=gene-LDO38_RS01200;Dbxref=GenBank:WP_224056155.1;Name=WP_224056155.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492354.1;locus_tag=LDO38_RS01200;product=IS5 family transposase;protein_id=WP_224056155.1;transl_table=11 NZ_CAJZAL010000013.1 Protein Homology CDS 9604 10076 . - 2 ID=cds-WP_224056155.1;Parent=gene-LDO38_RS01200;Dbxref=GenBank:WP_224056155.1;Name=WP_224056155.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492354.1;locus_tag=LDO38_RS01200;product=IS5 family transposase;protein_id=WP_224056155.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 10546 11532 . + . ID=gene-LDO38_RS01205;Name=LDO38_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01205;old_locus_tag=BVI2075_110013 NZ_CAJZAL010000013.1 GeneMarkS-2+ CDS 10546 11532 . + 0 ID=cds-WP_148278606.1;Parent=gene-LDO38_RS01205;Dbxref=GenBank:WP_148278606.1;Name=WP_148278606.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS01205;product=hypothetical protein;protein_id=WP_148278606.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 11560 11811 . + . ID=gene-LDO38_RS01210;Name=LDO38_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01210;old_locus_tag=BVI2075_110014 NZ_CAJZAL010000013.1 GeneMarkS-2+ CDS 11560 11811 . + 0 ID=cds-WP_155753979.1;Parent=gene-LDO38_RS01210;Dbxref=GenBank:WP_155753979.1;Name=WP_155753979.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS01210;product=hypothetical protein;protein_id=WP_155753979.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq pseudogene 11957 12655 . + . ID=gene-LDO38_RS01215;Name=LDO38_RS01215;end_range=12655,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS01215;partial=true;pseudo=true NZ_CAJZAL010000013.1 Protein Homology CDS 11957 12655 . + 0 ID=cds-LDO38_RS01215;Parent=gene-LDO38_RS01215;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0015074;end_range=12655,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611305.1;locus_tag=LDO38_RS01215;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 12686 13651 . - . ID=gene-LDO38_RS01220;Name=LDO38_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01220;old_locus_tag=BVI2075_110015 NZ_CAJZAL010000013.1 Protein Homology CDS 12686 13651 . - 0 ID=cds-WP_224056156.1;Parent=gene-LDO38_RS01220;Dbxref=GenBank:WP_224056156.1;Name=WP_224056156.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725609.1;locus_tag=LDO38_RS01220;product=AraC family transcriptional regulator;protein_id=WP_224056156.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 13746 14579 . + . ID=gene-LDO38_RS01225;Name=LDO38_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01225;old_locus_tag=BVI2075_110016 NZ_CAJZAL010000013.1 Protein Homology CDS 13746 14579 . + 0 ID=cds-WP_224056157.1;Parent=gene-LDO38_RS01225;Dbxref=GenBank:WP_224056157.1;Name=WP_224056157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879796.1;locus_tag=LDO38_RS01225;product=oxidoreductase;protein_id=WP_224056157.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 14839 15675 . + . ID=gene-LDO38_RS01230;Name=LDO38_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01230;old_locus_tag=BVI2075_110017 NZ_CAJZAL010000013.1 Protein Homology CDS 14839 15675 . + 0 ID=cds-WP_034195604.1;Parent=gene-LDO38_RS01230;Dbxref=GenBank:WP_034195604.1;Name=WP_034195604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879797.1;locus_tag=LDO38_RS01230;product=alpha/beta fold hydrolase;protein_id=WP_034195604.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 15736 16443 . - . ID=gene-LDO38_RS01235;Name=LDO38_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01235;old_locus_tag=BVI2075_110018 NZ_CAJZAL010000013.1 Protein Homology CDS 15736 16443 . - 0 ID=cds-WP_034195605.1;Parent=gene-LDO38_RS01235;Dbxref=GenBank:WP_034195605.1;Name=WP_034195605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879798.1;locus_tag=LDO38_RS01235;product=DUF3142 domain-containing protein;protein_id=WP_034195605.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 16451 18622 . - . ID=gene-LDO38_RS01240;Name=LDO38_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01240;old_locus_tag=BVI2075_110019 NZ_CAJZAL010000013.1 Protein Homology CDS 16451 18622 . - 0 ID=cds-WP_176043142.1;Parent=gene-LDO38_RS01240;Dbxref=GenBank:WP_176043142.1;Name=WP_176043142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660619.1;locus_tag=LDO38_RS01240;product=hypothetical protein;protein_id=WP_176043142.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq pseudogene 19063 19608 . - . ID=gene-LDO38_RS01245;Name=LDO38_RS01245;end_range=19608,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS01245;old_locus_tag=BVI2075_110020;partial=true;pseudo=true NZ_CAJZAL010000013.1 Protein Homology CDS 19063 19608 . - 0 ID=cds-LDO38_RS01245;Parent=gene-LDO38_RS01245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=19608,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879800.1;locus_tag=LDO38_RS01245;partial=true;product=3-deoxy-D-arabino-heptulosonate 7-phosphate synthase;pseudo=true;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 19710 20144 . - . ID=gene-LDO38_RS01250;Name=LDO38_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01250;old_locus_tag=BVI2075_110021 NZ_CAJZAL010000013.1 Protein Homology CDS 19710 20144 . - 0 ID=cds-WP_011884995.1;Parent=gene-LDO38_RS01250;Dbxref=GenBank:WP_011884995.1;Name=WP_011884995.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884995.1;locus_tag=LDO38_RS01250;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_011884995.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 20128 20589 . - . ID=gene-LDO38_RS01255;Name=LDO38_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01255;old_locus_tag=BVI2075_110022 NZ_CAJZAL010000013.1 Protein Homology CDS 20128 20589 . - 0 ID=cds-WP_059739202.1;Parent=gene-LDO38_RS01255;Dbxref=GenBank:WP_059739202.1;Name=WP_059739202.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484054.1;locus_tag=LDO38_RS01255;product=MerR family transcriptional regulator;protein_id=WP_059739202.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 20893 21495 . + . ID=gene-LDO38_RS01260;Name=LDO38_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01260;old_locus_tag=BVI2075_110024 NZ_CAJZAL010000013.1 Protein Homology CDS 20893 21495 . + 0 ID=cds-WP_011884997.1;Parent=gene-LDO38_RS01260;Dbxref=GenBank:WP_011884997.1;Name=WP_011884997.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407809.1;locus_tag=LDO38_RS01260;product=ComEA family DNA-binding protein;protein_id=WP_011884997.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 21571 22002 . + . ID=gene-LDO38_RS01265;Name=LDO38_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01265;old_locus_tag=BVI2075_110025 NZ_CAJZAL010000013.1 Protein Homology CDS 21571 22002 . + 0 ID=cds-WP_011884998.1;Parent=gene-LDO38_RS01265;Dbxref=GenBank:WP_011884998.1;Name=WP_011884998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332252.1;locus_tag=LDO38_RS01265;product=YidB family protein;protein_id=WP_011884998.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 22130 24727 . - . ID=gene-LDO38_RS01270;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=LDO38_RS01270;old_locus_tag=BVI2075_110026 NZ_CAJZAL010000013.1 Protein Homology CDS 22130 24727 . - 0 ID=cds-WP_059460799.1;Parent=gene-LDO38_RS01270;Dbxref=GenBank:WP_059460799.1;Name=WP_059460799.1;Ontology_term=GO:0009408,GO:0042026,GO:0005737;gbkey=CDS;gene=clpB;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890767.1;locus_tag=LDO38_RS01270;product=ATP-dependent chaperone ClpB;protein_id=WP_059460799.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 24882 25400 . - . ID=gene-LDO38_RS01275;Name=LDO38_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01275;old_locus_tag=BVI2075_110027 NZ_CAJZAL010000013.1 Protein Homology CDS 24882 25400 . - 0 ID=cds-WP_059460800.1;Parent=gene-LDO38_RS01275;Dbxref=GenBank:WP_059460800.1;Name=WP_059460800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885000.1;locus_tag=LDO38_RS01275;product=Rrf2 family transcriptional regulator;protein_id=WP_059460800.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 25653 26225 . + . ID=gene-LDO38_RS01280;Name=LDO38_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01280;old_locus_tag=BVI2075_110028 NZ_CAJZAL010000013.1 Protein Homology CDS 25653 26225 . + 0 ID=cds-WP_045579048.1;Parent=gene-LDO38_RS01280;Dbxref=GenBank:WP_045579048.1;Name=WP_045579048.1;Ontology_term=GO:0005344,GO:0019825,GO:0020037,GO:0046872;gbkey=CDS;go_function=oxygen carrier activity|0005344||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723121.1;locus_tag=LDO38_RS01280;product=group III truncated hemoglobin;protein_id=WP_045579048.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 26296 26772 . - . ID=gene-LDO38_RS01285;Name=LDO38_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01285;old_locus_tag=BVI2075_110029 NZ_CAJZAL010000013.1 Protein Homology CDS 26296 26772 . - 0 ID=cds-WP_011885002.1;Parent=gene-LDO38_RS01285;Dbxref=GenBank:WP_011885002.1;Name=WP_011885002.1;Ontology_term=GO:0006777,GO:0030366;gbkey=CDS;go_function=molybdopterin synthase activity|0030366||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549662.1;locus_tag=LDO38_RS01285;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WP_011885002.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 26831 27088 . - . ID=gene-LDO38_RS01290;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=LDO38_RS01290;old_locus_tag=BVI2075_110030 NZ_CAJZAL010000013.1 Protein Homology CDS 26831 27088 . - 0 ID=cds-WP_059460801.1;Parent=gene-LDO38_RS01290;Dbxref=GenBank:WP_059460801.1;Name=WP_059460801.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaD;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115001.1;locus_tag=LDO38_RS01290;product=molybdopterin converting factor subunit 1;protein_id=WP_059460801.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 27107 28354 . - . ID=gene-LDO38_RS01295;Name=LDO38_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01295;old_locus_tag=BVI2075_110031 NZ_CAJZAL010000013.1 Protein Homology CDS 27107 28354 . - 0 ID=cds-WP_041493838.1;Parent=gene-LDO38_RS01295;Dbxref=GenBank:WP_041493838.1;Name=WP_041493838.1;Ontology_term=GO:0006777,GO:0046872,GO:0061599;gbkey=CDS;go_function=metal ion binding|0046872||IEA,molybdopterin molybdotransferase activity|0061599||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255166.1;locus_tag=LDO38_RS01295;product=molybdopterin molybdotransferase MoeA;protein_id=WP_041493838.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 28637 30088 . - . ID=gene-LDO38_RS01300;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=LDO38_RS01300;old_locus_tag=BVI2075_110032 NZ_CAJZAL010000013.1 Protein Homology CDS 28637 30088 . - 0 ID=cds-WP_059460802.1;Parent=gene-LDO38_RS01300;Dbxref=GenBank:WP_059460802.1;Name=WP_059460802.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896870.1;locus_tag=LDO38_RS01300;product=threonine synthase;protein_id=WP_059460802.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 30103 31431 . - . ID=gene-LDO38_RS01305;Name=LDO38_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01305;old_locus_tag=BVI2075_110033 NZ_CAJZAL010000013.1 Protein Homology CDS 30103 31431 . - 0 ID=cds-WP_011885006.1;Parent=gene-LDO38_RS01305;Dbxref=GenBank:WP_011885006.1;Name=WP_011885006.1;Ontology_term=GO:0006520,GO:0004412;gbkey=CDS;go_function=homoserine dehydrogenase activity|0004412||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482858.1;locus_tag=LDO38_RS01305;product=homoserine dehydrogenase;protein_id=WP_011885006.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 31485 32723 . - . ID=gene-LDO38_RS01310;Name=LDO38_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01310;old_locus_tag=BVI2075_110034 NZ_CAJZAL010000013.1 Protein Homology CDS 31485 32723 . - 0 ID=cds-WP_011885007.1;Parent=gene-LDO38_RS01310;Dbxref=GenBank:WP_011885007.1;Name=WP_011885007.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758358.1;locus_tag=LDO38_RS01310;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_011885007.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 33040 33414 . + . ID=gene-LDO38_RS01315;Name=LDO38_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01315;old_locus_tag=BVI2075_110035 NZ_CAJZAL010000013.1 Protein Homology CDS 33040 33414 . + 0 ID=cds-WP_014723124.1;Parent=gene-LDO38_RS01315;Dbxref=GenBank:WP_014723124.1;Name=WP_014723124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496387.1;locus_tag=LDO38_RS01315;product=Mth938-like domain-containing protein;protein_id=WP_014723124.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 33551 35227 . + . ID=gene-LDO38_RS01320;Name=LDO38_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01320;old_locus_tag=BVI2075_110036 NZ_CAJZAL010000013.1 Protein Homology CDS 33551 35227 . + 0 ID=cds-WP_059460803.1;Parent=gene-LDO38_RS01320;Dbxref=GenBank:WP_059460803.1;Name=WP_059460803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364027.1;locus_tag=LDO38_RS01320;product=glycosyltransferase family 39 protein;protein_id=WP_059460803.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 35241 35612 . + . ID=gene-LDO38_RS01325;Name=LDO38_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01325;old_locus_tag=BVI2075_110037 NZ_CAJZAL010000013.1 Protein Homology CDS 35241 35612 . + 0 ID=cds-WP_011352303.1;Parent=gene-LDO38_RS01325;Dbxref=GenBank:WP_011352303.1;Name=WP_011352303.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482863.1;locus_tag=LDO38_RS01325;product=EamA family transporter;protein_id=WP_011352303.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 35761 36912 . + . ID=gene-LDO38_RS01330;Name=LDO38_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01330;old_locus_tag=BVI2075_110038 NZ_CAJZAL010000013.1 Protein Homology CDS 35761 36912 . + 0 ID=cds-WP_034195391.1;Parent=gene-LDO38_RS01330;Dbxref=GenBank:WP_034195391.1;Name=WP_034195391.1;Ontology_term=GO:0008483;gbkey=CDS;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192765.1;locus_tag=LDO38_RS01330;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_034195391.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 36919 37941 . + . ID=gene-LDO38_RS01335;Name=LDO38_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01335;old_locus_tag=BVI2075_110039 NZ_CAJZAL010000013.1 Protein Homology CDS 36919 37941 . + 0 ID=cds-WP_046426117.1;Parent=gene-LDO38_RS01335;Dbxref=GenBank:WP_046426117.1;Name=WP_046426117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496384.1;locus_tag=LDO38_RS01335;product=glycosyltransferase;protein_id=WP_046426117.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 37938 38885 . + . ID=gene-LDO38_RS01340;Name=LDO38_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01340;old_locus_tag=BVI2075_110040 NZ_CAJZAL010000013.1 Protein Homology CDS 37938 38885 . + 0 ID=cds-WP_011885012.1;Parent=gene-LDO38_RS01340;Dbxref=GenBank:WP_011885012.1;Name=WP_011885012.1;Ontology_term=GO:0016742;gbkey=CDS;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004539650.1;locus_tag=LDO38_RS01340;product=formyltransferase;protein_id=WP_011885012.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 38882 39937 . + . ID=gene-LDO38_RS01345;Name=LDO38_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01345;old_locus_tag=BVI2075_110041 NZ_CAJZAL010000013.1 Protein Homology CDS 38882 39937 . + 0 ID=cds-WP_011885013.1;Parent=gene-LDO38_RS01345;Dbxref=GenBank:WP_011885013.1;Name=WP_011885013.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698287.1;locus_tag=LDO38_RS01345;product=bifunctional UDP-4-keto-pentose/UDP-xylose synthase;protein_id=WP_011885013.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 39950 40846 . + . ID=gene-LDO38_RS01350;Name=LDO38_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01350;old_locus_tag=BVI2075_110042 NZ_CAJZAL010000013.1 Protein Homology CDS 39950 40846 . + 0 ID=cds-WP_011885014.1;Parent=gene-LDO38_RS01350;Dbxref=GenBank:WP_011885014.1;Name=WP_011885014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890738.1;locus_tag=LDO38_RS01350;product=polysaccharide deacetylase family protein;protein_id=WP_011885014.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 40980 41441 . + . ID=gene-LDO38_RS01355;Name=LDO38_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01355;old_locus_tag=BVI2075_110043 NZ_CAJZAL010000013.1 Protein Homology CDS 40980 41441 . + 0 ID=cds-WP_011885015.1;Parent=gene-LDO38_RS01355;Dbxref=GenBank:WP_011885015.1;Name=WP_011885015.1;Ontology_term=GO:0008379,GO:0051920;gbkey=CDS;go_function=thioredoxin peroxidase activity|0008379||IEA,peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549652.1;locus_tag=LDO38_RS01355;product=peroxiredoxin;protein_id=WP_011885015.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq pseudogene 41637 41878 . - . ID=gene-LDO38_RS30245;Name=LDO38_RS30245;end_range=41878,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30245;partial=true;pseudo=true;start_range=.,41637 NZ_CAJZAL010000013.1 Protein Homology CDS 41637 41878 . - 0 ID=cds-LDO38_RS30245;Parent=gene-LDO38_RS30245;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=41878,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026209.1;locus_tag=LDO38_RS30245;partial=true;product=hypothetical protein;pseudo=true;start_range=.,41637;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 41774 43591 . + . ID=gene-LDO38_RS01360;Name=LDO38_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01360;old_locus_tag=BVI2075_110044 NZ_CAJZAL010000013.1 Protein Homology CDS 41774 43591 . + 0 ID=cds-WP_011885016.1;Parent=gene-LDO38_RS01360;Dbxref=GenBank:WP_011885016.1;Name=WP_011885016.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694301.1;locus_tag=LDO38_RS01360;product=PhoH family protein;protein_id=WP_011885016.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 43824 44864 . + . ID=gene-LDO38_RS01365;Name=LDO38_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01365;old_locus_tag=BVI2075_110045 NZ_CAJZAL010000013.1 Protein Homology CDS 43824 44864 . + 0 ID=cds-WP_011885017.1;Parent=gene-LDO38_RS01365;Dbxref=GenBank:WP_011885017.1;Name=WP_011885017.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549650.1;locus_tag=LDO38_RS01365;product=C40 family peptidase;protein_id=WP_011885017.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 44969 45979 . - . ID=gene-LDO38_RS01370;Name=LDO38_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01370;old_locus_tag=BVI2075_110046 NZ_CAJZAL010000013.1 Protein Homology CDS 44969 45979 . - 0 ID=cds-WP_059460804.1;Parent=gene-LDO38_RS01370;Dbxref=GenBank:WP_059460804.1;Name=WP_059460804.1;Ontology_term=GO:0035435,GO:0005315,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193771.1;locus_tag=LDO38_RS01370;product=inorganic phosphate transporter;protein_id=WP_059460804.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 45990 46616 . - . ID=gene-LDO38_RS01375;Name=LDO38_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01375;old_locus_tag=BVI2075_110047 NZ_CAJZAL010000013.1 Protein Homology CDS 45990 46616 . - 0 ID=cds-WP_011885019.1;Parent=gene-LDO38_RS01375;Dbxref=GenBank:WP_011885019.1;Name=WP_011885019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698298.1;locus_tag=LDO38_RS01375;product=DUF47 domain-containing protein;protein_id=WP_011885019.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 46755 48137 . - . ID=gene-LDO38_RS01380;Name=LDO38_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01380;old_locus_tag=BVI2075_110048 NZ_CAJZAL010000013.1 Protein Homology CDS 46755 48137 . - 0 ID=cds-WP_011885020.1;Parent=gene-LDO38_RS01380;Dbxref=GenBank:WP_011885020.1;Name=WP_011885020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192724.1;locus_tag=LDO38_RS01380;product=replicative DNA helicase;protein_id=WP_011885020.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 48273 48725 . - . ID=gene-LDO38_RS01385;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=LDO38_RS01385;old_locus_tag=BVI2075_110049 NZ_CAJZAL010000013.1 Protein Homology CDS 48273 48725 . - 0 ID=cds-WP_011885021.1;Parent=gene-LDO38_RS01385;Dbxref=GenBank:WP_011885021.1;Name=WP_011885021.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402297.1;locus_tag=LDO38_RS01385;product=50S ribosomal protein L9;protein_id=WP_011885021.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 48753 49028 . - . ID=gene-LDO38_RS01390;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=LDO38_RS01390;old_locus_tag=BVI2075_110050 NZ_CAJZAL010000013.1 Protein Homology CDS 48753 49028 . - 0 ID=cds-WP_011885022.1;Parent=gene-LDO38_RS01390;Dbxref=GenBank:WP_011885022.1;Name=WP_011885022.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017776738.1;locus_tag=LDO38_RS01390;product=30S ribosomal protein S18;protein_id=WP_011885022.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 49033 49332 . - . ID=gene-LDO38_RS01395;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=LDO38_RS01395;old_locus_tag=BVI2075_110051 NZ_CAJZAL010000013.1 Protein Homology CDS 49033 49332 . - 0 ID=cds-WP_011885023.1;Parent=gene-LDO38_RS01395;Dbxref=GenBank:WP_011885023.1;Name=WP_011885023.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328667.1;locus_tag=LDO38_RS01395;product=primosomal replication protein N;protein_id=WP_011885023.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 49373 49747 . - . ID=gene-LDO38_RS01400;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=LDO38_RS01400;old_locus_tag=BVI2075_110052 NZ_CAJZAL010000013.1 Protein Homology CDS 49373 49747 . - 0 ID=cds-WP_006755436.1;Parent=gene-LDO38_RS01400;Dbxref=GenBank:WP_006755436.1;Name=WP_006755436.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010103105.1;locus_tag=LDO38_RS01400;product=30S ribosomal protein S6;protein_id=WP_006755436.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 49952 50863 . - . ID=gene-LDO38_RS01405;Name=LDO38_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01405;old_locus_tag=BVI2075_110053 NZ_CAJZAL010000013.1 Protein Homology CDS 49952 50863 . - 0 ID=cds-WP_011885024.1;Parent=gene-LDO38_RS01405;Dbxref=GenBank:WP_011885024.1;Name=WP_011885024.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896849.1;locus_tag=LDO38_RS01405;product=LysR family transcriptional regulator;protein_id=WP_011885024.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 51067 52842 . + . ID=gene-LDO38_RS01410;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=LDO38_RS01410;old_locus_tag=BVI2075_110054 NZ_CAJZAL010000013.1 Protein Homology CDS 51067 52842 . + 0 ID=cds-WP_060121121.1;Parent=gene-LDO38_RS01410;Dbxref=GenBank:WP_060121121.1;Name=WP_060121121.1;Ontology_term=GO:0009436,GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;go_process=glyoxylate catabolic process|0009436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896848.1;locus_tag=LDO38_RS01410;product=glyoxylate carboligase;protein_id=WP_060121121.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 52887 53696 . + . ID=gene-LDO38_RS01415;Name=hyi;gbkey=Gene;gene=hyi;gene_biotype=protein_coding;locus_tag=LDO38_RS01415;old_locus_tag=BVI2075_110055 NZ_CAJZAL010000013.1 Protein Homology CDS 52887 53696 . + 0 ID=cds-WP_059460806.1;Parent=gene-LDO38_RS01415;Dbxref=GenBank:WP_059460806.1;Name=WP_059460806.1;gbkey=CDS;gene=hyi;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352319.1;locus_tag=LDO38_RS01415;product=hydroxypyruvate isomerase;protein_id=WP_059460806.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 53737 54630 . + . ID=gene-LDO38_RS01420;Name=LDO38_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01420;old_locus_tag=BVI2075_110056 NZ_CAJZAL010000013.1 Protein Homology CDS 53737 54630 . + 0 ID=cds-WP_224056158.1;Parent=gene-LDO38_RS01420;Dbxref=GenBank:WP_224056158.1;Name=WP_224056158.1;Ontology_term=GO:0019580,GO:0008679;gbkey=CDS;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=galactarate metabolic process|0019580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896847.1;locus_tag=LDO38_RS01420;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_224056158.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 55106 55576 . + . ID=gene-LDO38_RS01425;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=LDO38_RS01425;old_locus_tag=BVI2075_110057 NZ_CAJZAL010000013.1 Protein Homology CDS 55106 55576 . + 0 ID=cds-WP_014723131.1;Parent=gene-LDO38_RS01425;Dbxref=GenBank:WP_014723131.1;Name=WP_014723131.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890694.1;locus_tag=LDO38_RS01425;product=peptidoglycan-binding protein LysM;protein_id=WP_014723131.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 55669 56691 . - . ID=gene-LDO38_RS01430;Name=LDO38_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01430;old_locus_tag=BVI2075_110058 NZ_CAJZAL010000013.1 Protein Homology CDS 55669 56691 . - 0 ID=cds-WP_046426102.1;Parent=gene-LDO38_RS01430;Dbxref=GenBank:WP_046426102.1;Name=WP_046426102.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755059.1;locus_tag=LDO38_RS01430;product=asparaginase;protein_id=WP_046426102.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 56966 57256 . + . ID=gene-LDO38_RS01435;Name=LDO38_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01435;old_locus_tag=BVI2075_110060 NZ_CAJZAL010000013.1 Protein Homology CDS 56966 57256 . + 0 ID=cds-WP_034195366.1;Parent=gene-LDO38_RS01435;Dbxref=GenBank:WP_034195366.1;Name=WP_034195366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423758.1;locus_tag=LDO38_RS01435;product=PsiF family protein;protein_id=WP_034195366.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 57588 58046 . + . ID=gene-LDO38_RS01440;Name=LDO38_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01440;old_locus_tag=BVI2075_110061 NZ_CAJZAL010000013.1 Protein Homology CDS 57588 58046 . + 0 ID=cds-WP_034195365.1;Parent=gene-LDO38_RS01440;Dbxref=GenBank:WP_034195365.1;Name=WP_034195365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896843.1;locus_tag=LDO38_RS01440;product=hypothetical protein;protein_id=WP_034195365.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 58249 58836 . + . ID=gene-LDO38_RS01445;Name=LDO38_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01445;old_locus_tag=BVI2075_110062 NZ_CAJZAL010000013.1 Protein Homology CDS 58249 58836 . + 0 ID=cds-WP_011885032.1;Parent=gene-LDO38_RS01445;Dbxref=GenBank:WP_011885032.1;Name=WP_011885032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890687.1;locus_tag=LDO38_RS01445;product=BPSL1445 family SYLF domain-containing lipoprotein;protein_id=WP_011885032.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 58926 59990 . - . ID=gene-LDO38_RS01450;Name=LDO38_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01450;old_locus_tag=BVI2075_110063 NZ_CAJZAL010000013.1 Protein Homology CDS 58926 59990 . - 0 ID=cds-WP_011885033.1;Parent=gene-LDO38_RS01450;Dbxref=GenBank:WP_011885033.1;Name=WP_011885033.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004552799.1;locus_tag=LDO38_RS01450;product=glycosyltransferase family 4 protein;protein_id=WP_011885033.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 60202 61377 . - . ID=gene-LDO38_RS01455;Name=LDO38_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01455;old_locus_tag=BVI2075_110065 NZ_CAJZAL010000013.1 Protein Homology CDS 60202 61377 . - 0 ID=cds-WP_059888184.1;Parent=gene-LDO38_RS01455;Dbxref=GenBank:WP_059888184.1;Name=WP_059888184.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026187.1;locus_tag=LDO38_RS01455;product=AAA family ATPase;protein_id=WP_059888184.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 61411 62583 . - . ID=gene-LDO38_RS01460;Name=LDO38_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01460;old_locus_tag=BVI2075_110066 NZ_CAJZAL010000013.1 Protein Homology CDS 61411 62583 . - 0 ID=cds-WP_011885035.1;Parent=gene-LDO38_RS01460;Dbxref=GenBank:WP_011885035.1;Name=WP_011885035.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755342.1;locus_tag=LDO38_RS01460;product=mechanosensitive ion channel family protein;protein_id=WP_011885035.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 62680 63036 . - . ID=gene-LDO38_RS01465;Name=LDO38_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01465;old_locus_tag=BVI2075_110067 NZ_CAJZAL010000013.1 Protein Homology CDS 62680 63036 . - 0 ID=cds-WP_011885036.1;Parent=gene-LDO38_RS01465;Dbxref=GenBank:WP_011885036.1;Name=WP_011885036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402276.1;locus_tag=LDO38_RS01465;product=Rap1a/Tai family immunity protein;protein_id=WP_011885036.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 63119 63829 . - . ID=gene-LDO38_RS01470;Name=LDO38_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01470;old_locus_tag=BVI2075_110068 NZ_CAJZAL010000013.1 Protein Homology CDS 63119 63829 . - 0 ID=cds-WP_011885037.1;Parent=gene-LDO38_RS01470;Dbxref=GenBank:WP_011885037.1;Name=WP_011885037.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885037.1;locus_tag=LDO38_RS01470;product=ankyrin repeat domain-containing protein;protein_id=WP_011885037.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 63874 64653 . - . ID=gene-LDO38_RS01475;Name=LDO38_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01475;old_locus_tag=BVI2075_110069 NZ_CAJZAL010000013.1 Protein Homology CDS 63874 64653 . - 0 ID=cds-WP_011885038.1;Parent=gene-LDO38_RS01475;Dbxref=GenBank:WP_011885038.1;Name=WP_011885038.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485949.1;locus_tag=LDO38_RS01475;product=TatD family hydrolase;protein_id=WP_011885038.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 64732 65760 . - . ID=gene-LDO38_RS01480;Name=LDO38_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01480;old_locus_tag=BVI2075_110070 NZ_CAJZAL010000013.1 Protein Homology CDS 64732 65760 . - 0 ID=cds-WP_011885039.1;Parent=gene-LDO38_RS01480;Dbxref=GenBank:WP_011885039.1;Name=WP_011885039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885039.1;locus_tag=LDO38_RS01480;product=DNA polymerase III subunit delta';protein_id=WP_011885039.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 65779 66399 . - . ID=gene-LDO38_RS01485;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=LDO38_RS01485;old_locus_tag=BVI2075_110071 NZ_CAJZAL010000013.1 Protein Homology CDS 65779 66399 . - 0 ID=cds-WP_011885040.1;Parent=gene-LDO38_RS01485;Dbxref=GenBank:WP_011885040.1;Name=WP_011885040.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521281.1;locus_tag=LDO38_RS01485;product=dTMP kinase;protein_id=WP_011885040.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 66399 67418 . - . ID=gene-LDO38_RS01490;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=LDO38_RS01490;old_locus_tag=BVI2075_110072 NZ_CAJZAL010000013.1 Protein Homology CDS 66399 67418 . - 0 ID=cds-WP_011885041.1;Parent=gene-LDO38_RS01490;Dbxref=GenBank:WP_011885041.1;Name=WP_011885041.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601776.1;locus_tag=LDO38_RS01490;product=endolytic transglycosylase MltG;protein_id=WP_011885041.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 67496 68530 . + . ID=gene-LDO38_RS01495;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=LDO38_RS01495;old_locus_tag=BVI2075_110073 NZ_CAJZAL010000013.1 Protein Homology CDS 67496 68530 . + 0 ID=cds-WP_011885042.1;Parent=gene-LDO38_RS01495;Dbxref=GenBank:WP_011885042.1;Name=WP_011885042.1;Ontology_term=GO:0006400,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004535832.1;locus_tag=LDO38_RS01495;product=CAF17-like 4Fe-4S cluster assembly/insertion protein YgfZ;protein_id=WP_011885042.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 68607 69461 . + . ID=gene-LDO38_RS01500;Name=LDO38_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01500;old_locus_tag=BVI2075_110074 NZ_CAJZAL010000013.1 Protein Homology CDS 68607 69461 . + 0 ID=cds-WP_060092122.1;Parent=gene-LDO38_RS01500;Dbxref=GenBank:WP_060092122.1;Name=WP_060092122.1;Ontology_term=GO:0007030,GO:0009306;gbkey=CDS;go_process=Golgi organization|0007030||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885043.1;locus_tag=LDO38_RS01500;product=NRDE family protein;protein_id=WP_060092122.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 69485 69937 . - . ID=gene-LDO38_RS01505;Name=LDO38_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01505;old_locus_tag=BVI2075_110075 NZ_CAJZAL010000013.1 Protein Homology CDS 69485 69937 . - 0 ID=cds-WP_011885044.1;Parent=gene-LDO38_RS01505;Dbxref=GenBank:WP_011885044.1;Name=WP_011885044.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411891.1;locus_tag=LDO38_RS01505;product=GNAT family N-acetyltransferase;protein_id=WP_011885044.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 69972 70934 . - . ID=gene-LDO38_RS01510;Name=LDO38_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01510;old_locus_tag=BVI2075_110076 NZ_CAJZAL010000013.1 Protein Homology CDS 69972 70934 . - 0 ID=cds-WP_034195363.1;Parent=gene-LDO38_RS01510;Dbxref=GenBank:WP_034195363.1;Name=WP_034195363.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414493.1;locus_tag=LDO38_RS01510;product=alpha/beta hydrolase;protein_id=WP_034195363.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 71167 71646 . - . ID=gene-LDO38_RS01515;Name=LDO38_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01515;old_locus_tag=BVI2075_110077 NZ_CAJZAL010000013.1 Protein Homology CDS 71167 71646 . - 0 ID=cds-WP_011885047.1;Parent=gene-LDO38_RS01515;Dbxref=GenBank:WP_011885047.1;Name=WP_011885047.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193935.1;locus_tag=LDO38_RS01515;product=PaaI family thioesterase;protein_id=WP_011885047.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 71643 71960 . - . ID=gene-LDO38_RS01520;Name=LDO38_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01520;old_locus_tag=BVI2075_110078 NZ_CAJZAL010000013.1 Protein Homology CDS 71643 71960 . - 0 ID=cds-WP_034195362.1;Parent=gene-LDO38_RS01520;Dbxref=GenBank:WP_034195362.1;Name=WP_034195362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192097.1;locus_tag=LDO38_RS01520;product=Dabb family protein;protein_id=WP_034195362.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 72389 72961 . + . ID=gene-LDO38_RS01525;Name=LDO38_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01525;old_locus_tag=BVI2075_110080 NZ_CAJZAL010000013.1 Protein Homology CDS 72389 72961 . + 0 ID=cds-WP_011885049.1;Parent=gene-LDO38_RS01525;Dbxref=GenBank:WP_011885049.1;Name=WP_011885049.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885049.1;locus_tag=LDO38_RS01525;product=GNAT family N-acetyltransferase;protein_id=WP_011885049.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 73180 74019 . - . ID=gene-LDO38_RS01530;Name=LDO38_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01530;old_locus_tag=BVI2075_110081 NZ_CAJZAL010000013.1 Protein Homology CDS 73180 74019 . - 0 ID=cds-WP_011885050.1;Parent=gene-LDO38_RS01530;Dbxref=GenBank:WP_011885050.1;Name=WP_011885050.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885050.1;locus_tag=LDO38_RS01530;product=TrmB family transcriptional regulator;protein_id=WP_011885050.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 74137 74502 . + . ID=gene-LDO38_RS01535;Name=LDO38_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01535;old_locus_tag=BVI2075_110082 NZ_CAJZAL010000013.1 Protein Homology CDS 74137 74502 . + 0 ID=cds-WP_011885051.1;Parent=gene-LDO38_RS01535;Dbxref=GenBank:WP_011885051.1;Name=WP_011885051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017453393.1;locus_tag=LDO38_RS01535;product=RidA family protein;protein_id=WP_011885051.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 74499 75737 . + . ID=gene-LDO38_RS01540;Name=LDO38_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01540;old_locus_tag=BVI2075_110083 NZ_CAJZAL010000013.1 Protein Homology CDS 74499 75737 . + 0 ID=cds-WP_059896225.1;Parent=gene-LDO38_RS01540;Dbxref=GenBank:WP_059896225.1;Name=WP_059896225.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723147.1;locus_tag=LDO38_RS01540;product=MFS transporter;protein_id=WP_059896225.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 75932 76477 . + . ID=gene-LDO38_RS01545;Name=LDO38_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01545;old_locus_tag=BVI2075_110084 NZ_CAJZAL010000013.1 Protein Homology CDS 75932 76477 . + 0 ID=cds-WP_059888178.1;Parent=gene-LDO38_RS01545;Dbxref=GenBank:WP_059888178.1;Name=WP_059888178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885053.1;locus_tag=LDO38_RS01545;product=hypothetical protein;protein_id=WP_059888178.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 76674 78065 . - . ID=gene-LDO38_RS01550;Name=LDO38_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01550;old_locus_tag=BVI2075_110085 NZ_CAJZAL010000013.1 Protein Homology CDS 76674 78065 . - 0 ID=cds-WP_034195356.1;Parent=gene-LDO38_RS01550;Dbxref=GenBank:WP_034195356.1;Name=WP_034195356.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885054.1;locus_tag=LDO38_RS01550;product=alpha/beta hydrolase family protein;protein_id=WP_034195356.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 78290 80557 . + . ID=gene-LDO38_RS01555;Name=LDO38_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01555;old_locus_tag=BVI2075_110087 NZ_CAJZAL010000013.1 Protein Homology CDS 78290 80557 . + 0 ID=cds-WP_041493841.1;Parent=gene-LDO38_RS01555;Dbxref=GenBank:WP_041493841.1;Name=WP_041493841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885055.1;locus_tag=LDO38_RS01555;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_041493841.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 81337 83466 . + . ID=gene-LDO38_RS01560;Name=LDO38_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01560;old_locus_tag=BVI2075_110089 NZ_CAJZAL010000013.1 Protein Homology CDS 81337 83466 . + 0 ID=cds-WP_124259650.1;Parent=gene-LDO38_RS01560;Dbxref=GenBank:WP_124259650.1;Name=WP_124259650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760027.1;locus_tag=LDO38_RS01560;product=hypothetical protein;protein_id=WP_124259650.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 83548 84948 . - . ID=gene-LDO38_RS01565;Name=LDO38_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01565;old_locus_tag=BVI2075_110090 NZ_CAJZAL010000013.1 Protein Homology CDS 83548 84948 . - 0 ID=cds-WP_011885057.1;Parent=gene-LDO38_RS01565;Dbxref=GenBank:WP_011885057.1;Name=WP_011885057.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364061.1;locus_tag=LDO38_RS01565;product=sensor domain-containing diguanylate cyclase;protein_id=WP_011885057.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 85261 86439 . - . ID=gene-LDO38_RS01570;Name=LDO38_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01570;old_locus_tag=BVI2075_110092 NZ_CAJZAL010000013.1 Protein Homology CDS 85261 86439 . - 0 ID=cds-WP_059461301.1;Parent=gene-LDO38_RS01570;Dbxref=GenBank:WP_059461301.1;Name=WP_059461301.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890652.1;locus_tag=LDO38_RS01570;product=acetyl-CoA C-acyltransferase;protein_id=WP_059461301.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 86483 87115 . - . ID=gene-LDO38_RS01575;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=LDO38_RS01575;old_locus_tag=BVI2075_110093 NZ_CAJZAL010000013.1 Protein Homology CDS 86483 87115 . - 0 ID=cds-WP_011885059.1;Parent=gene-LDO38_RS01575;Dbxref=GenBank:WP_011885059.1;Name=WP_011885059.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328688.1;locus_tag=LDO38_RS01575;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_011885059.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 87161 89245 . - . ID=gene-LDO38_RS01580;Name=LDO38_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01580;old_locus_tag=BVI2075_110094 NZ_CAJZAL010000013.1 Protein Homology CDS 87161 89245 . - 0 ID=cds-WP_175949198.1;Parent=gene-LDO38_RS01580;Dbxref=GenBank:WP_175949198.1;Name=WP_175949198.1;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483901.1;locus_tag=LDO38_RS01580;product=3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein;protein_id=WP_175949198.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 89432 91075 . - . ID=gene-LDO38_RS01585;Name=LDO38_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01585;old_locus_tag=BVI2075_110095 NZ_CAJZAL010000013.1 Protein Homology CDS 89432 91075 . - 0 ID=cds-WP_124259639.1;Parent=gene-LDO38_RS01585;Dbxref=GenBank:WP_124259639.1;Name=WP_124259639.1;Ontology_term=GO:0016874;gbkey=CDS;go_function=ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723157.1;locus_tag=LDO38_RS01585;product=3-(methylthio)propionyl-CoA ligase;protein_id=WP_124259639.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 91251 92819 . + . ID=gene-LDO38_RS01590;Name=LDO38_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01590;old_locus_tag=BVI2075_110096 NZ_CAJZAL010000013.1 Protein Homology CDS 91251 92819 . + 0 ID=cds-WP_045579009.1;Parent=gene-LDO38_RS01590;Dbxref=GenBank:WP_045579009.1;Name=WP_045579009.1;Ontology_term=GO:0000287,GO:0005524,GO:0070733;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657149.1;locus_tag=LDO38_RS01590;product=protein adenylyltransferase SelO;protein_id=WP_045579009.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 92858 93289 . + . ID=gene-LDO38_RS01595;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=LDO38_RS01595;old_locus_tag=BVI2075_110097 NZ_CAJZAL010000013.1 Protein Homology CDS 92858 93289 . + 0 ID=cds-WP_011885063.1;Parent=gene-LDO38_RS01595;Dbxref=GenBank:WP_011885063.1;Name=WP_011885063.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761174.1;locus_tag=LDO38_RS01595;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_011885063.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 93414 93944 . + . ID=gene-LDO38_RS01600;Name=LDO38_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01600;old_locus_tag=BVI2075_110099 NZ_CAJZAL010000013.1 Protein Homology CDS 93414 93944 . + 0 ID=cds-WP_014723160.1;Parent=gene-LDO38_RS01600;Dbxref=GenBank:WP_014723160.1;Name=WP_014723160.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904993.1;locus_tag=LDO38_RS01600;product=septation protein A;protein_id=WP_014723160.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 93946 94254 . + . ID=gene-LDO38_RS01605;Name=LDO38_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01605;old_locus_tag=BVI2075_110100 NZ_CAJZAL010000013.1 Protein Homology CDS 93946 94254 . + 0 ID=cds-WP_011885065.1;Parent=gene-LDO38_RS01605;Dbxref=GenBank:WP_011885065.1;Name=WP_011885065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657151.1;locus_tag=LDO38_RS01605;product=BolA family protein;protein_id=WP_011885065.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 94273 95055 . + . ID=gene-LDO38_RS01610;Name=LDO38_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01610;old_locus_tag=BVI2075_110101 NZ_CAJZAL010000013.1 Protein Homology CDS 94273 95055 . + 0 ID=cds-WP_011885066.1;Parent=gene-LDO38_RS01610;Dbxref=GenBank:WP_011885066.1;Name=WP_011885066.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601097.1;locus_tag=LDO38_RS01610;product=peptidylprolyl isomerase;protein_id=WP_011885066.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 95198 95737 . - . ID=gene-LDO38_RS01615;Name=LDO38_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01615;old_locus_tag=BVI2075_110102 NZ_CAJZAL010000013.1 Protein Homology CDS 95198 95737 . - 0 ID=cds-WP_046426919.1;Parent=gene-LDO38_RS01615;Dbxref=GenBank:WP_046426919.1;Name=WP_046426919.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723162.1;locus_tag=LDO38_RS01615;product=GNAT family N-acetyltransferase;protein_id=WP_046426919.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 95737 99801 . - . ID=gene-LDO38_RS01620;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=LDO38_RS01620;old_locus_tag=BVI2075_110103 NZ_CAJZAL010000013.1 Protein Homology CDS 95737 99801 . - 0 ID=cds-WP_124259638.1;Parent=gene-LDO38_RS01620;Dbxref=GenBank:WP_124259638.1;Name=WP_124259638.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213195.1;locus_tag=LDO38_RS01620;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_124259638.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 100128 101429 . + . ID=gene-LDO38_RS01625;Name=LDO38_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01625;old_locus_tag=BVI2075_110104 NZ_CAJZAL010000013.1 Protein Homology CDS 100128 101429 . + 0 ID=cds-WP_059568336.1;Parent=gene-LDO38_RS01625;Dbxref=GenBank:WP_059568336.1;Name=WP_059568336.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527209.1;locus_tag=LDO38_RS01625;product=FAD-dependent oxidoreductase;protein_id=WP_059568336.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 101483 101953 . + . ID=gene-LDO38_RS30250;Name=LDO38_RS30250;end_range=101953,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30250;old_locus_tag=BVI2075_110105;partial=true NZ_CAJZAL010000013.1 Protein Homology CDS 101483 101953 . + 0 ID=cds-WP_435520879.1;Parent=gene-LDO38_RS30250;Dbxref=GenBank:WP_435520879.1;Name=WP_435520879.1;Ontology_term=GO:0000166,GO:0046872,GO:0052856;end_range=101953,.;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,metal ion binding|0046872||IEA,NAD(P)HX epimerase activity|0052856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013339206.1;locus_tag=LDO38_RS30250;partial=true;product=NAD(P)H-hydrate epimerase;protein_id=WP_435520879.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq pseudogene 101964 103013 . + . ID=gene-LDO38_RS01630;Name=LDO38_RS01630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS01630;partial=true;pseudo=true;start_range=.,101964 NZ_CAJZAL010000013.1 Protein Homology CDS 101964 103013 . + 2 ID=cds-LDO38_RS01630;Parent=gene-LDO38_RS01630;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492676.1;locus_tag=LDO38_RS01630;partial=true;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;pseudo=true;start_range=.,101964;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 103131 104753 . + . ID=gene-LDO38_RS01635;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=LDO38_RS01635;old_locus_tag=BVI2075_110108 NZ_CAJZAL010000013.1 Protein Homology CDS 103131 104753 . + 0 ID=cds-WP_034195347.1;Parent=gene-LDO38_RS01635;Dbxref=GenBank:WP_034195347.1;Name=WP_034195347.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332014.1;locus_tag=LDO38_RS01635;product=glucose-6-phosphate isomerase;protein_id=WP_034195347.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 104812 105525 . - . ID=gene-LDO38_RS01640;Name=LDO38_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01640;old_locus_tag=BVI2075_110109 NZ_CAJZAL010000013.1 Protein Homology CDS 104812 105525 . - 0 ID=cds-WP_045579003.1;Parent=gene-LDO38_RS01640;Dbxref=GenBank:WP_045579003.1;Name=WP_045579003.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549613.1;locus_tag=LDO38_RS01640;product=ABC transporter ATP-binding protein;protein_id=WP_045579003.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 105524 106201 . + . ID=gene-LDO38_RS01645;Name=LDO38_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01645;old_locus_tag=BVI2075_110110 NZ_CAJZAL010000013.1 Protein Homology CDS 105524 106201 . + 0 ID=cds-WP_034195345.1;Parent=gene-LDO38_RS01645;Dbxref=GenBank:WP_034195345.1;Name=WP_034195345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489343.1;locus_tag=LDO38_RS01645;product=arylesterase;protein_id=WP_034195345.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 106360 108294 . - . ID=gene-LDO38_RS01650;Name=LDO38_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01650;old_locus_tag=BVI2075_110111 NZ_CAJZAL010000013.1 Protein Homology CDS 106360 108294 . - 0 ID=cds-WP_059461306.1;Parent=gene-LDO38_RS01650;Dbxref=GenBank:WP_059461306.1;Name=WP_059461306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554314.1;locus_tag=LDO38_RS01650;product=SurA N-terminal domain-containing protein;protein_id=WP_059461306.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 108420 108496 . - . ID=gene-LDO38_RS01655;Name=LDO38_RS01655;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS01655;old_locus_tag=BVI2075_TRNA46 NZ_CAJZAL010000013.1 tRNAscan-SE tRNA 108420 108496 . - . ID=rna-LDO38_RS01655;Parent=gene-LDO38_RS01655;anticodon=(pos:complement(108460..108462));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS01655;product=tRNA-Asp NZ_CAJZAL010000013.1 tRNAscan-SE exon 108420 108496 . - . ID=exon-LDO38_RS01655-1;Parent=rna-LDO38_RS01655;anticodon=(pos:complement(108460..108462));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS01655;product=tRNA-Asp NZ_CAJZAL010000013.1 RefSeq gene 108520 108595 . - . ID=gene-LDO38_RS01660;Name=LDO38_RS01660;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS01660;old_locus_tag=BVI2075_TRNA45 NZ_CAJZAL010000013.1 tRNAscan-SE tRNA 108520 108595 . - . ID=rna-LDO38_RS01660;Parent=gene-LDO38_RS01660;anticodon=(pos:complement(108560..108562));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS01660;product=tRNA-Val NZ_CAJZAL010000013.1 tRNAscan-SE exon 108520 108595 . - . ID=exon-LDO38_RS01660-1;Parent=rna-LDO38_RS01660;anticodon=(pos:complement(108560..108562));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS01660;product=tRNA-Val NZ_CAJZAL010000013.1 RefSeq gene 108801 111224 . - . ID=gene-LDO38_RS01665;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=LDO38_RS01665;old_locus_tag=BVI2075_110113 NZ_CAJZAL010000013.1 Protein Homology CDS 108801 111224 . - 0 ID=cds-WP_011885075.1;Parent=gene-LDO38_RS01665;Dbxref=GenBank:WP_011885075.1;Name=WP_011885075.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007585905.1;locus_tag=LDO38_RS01665;product=endopeptidase La;protein_id=WP_011885075.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 111422 112693 . - . ID=gene-LDO38_RS01670;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=LDO38_RS01670;old_locus_tag=BVI2075_110114 NZ_CAJZAL010000013.1 Protein Homology CDS 111422 112693 . - 0 ID=cds-WP_011885076.1;Parent=gene-LDO38_RS01670;Dbxref=GenBank:WP_011885076.1;Name=WP_011885076.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521258.1;locus_tag=LDO38_RS01670;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_011885076.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 112855 113508 . - . ID=gene-LDO38_RS01675;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=LDO38_RS01675;old_locus_tag=BVI2075_110115 NZ_CAJZAL010000013.1 Protein Homology CDS 112855 113508 . - 0 ID=cds-WP_011885077.1;Parent=gene-LDO38_RS01675;Dbxref=GenBank:WP_011885077.1;Name=WP_011885077.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026149.1;locus_tag=LDO38_RS01675;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_011885077.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 113649 114995 . - . ID=gene-LDO38_RS01680;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=LDO38_RS01680;old_locus_tag=BVI2075_110116 NZ_CAJZAL010000013.1 Protein Homology CDS 113649 114995 . - 0 ID=cds-WP_011885078.1;Parent=gene-LDO38_RS01680;Dbxref=GenBank:WP_011885078.1;Name=WP_011885078.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004539679.1;locus_tag=LDO38_RS01680;product=trigger factor;protein_id=WP_011885078.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 115423 116568 . + . ID=gene-LDO38_RS01685;Name=LDO38_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01685;old_locus_tag=BVI2075_110117 NZ_CAJZAL010000013.1 Protein Homology CDS 115423 116568 . + 0 ID=cds-WP_059461307.1;Parent=gene-LDO38_RS01685;Dbxref=GenBank:WP_059461307.1;Name=WP_059461307.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364080.1;locus_tag=LDO38_RS01685;product=glycerate kinase;protein_id=WP_059461307.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 116631 117083 . + . ID=gene-LDO38_RS01690;Name=LDO38_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01690;old_locus_tag=BVI2075_110118 NZ_CAJZAL010000013.1 Protein Homology CDS 116631 117083 . + 0 ID=cds-WP_034195341.1;Parent=gene-LDO38_RS01690;Dbxref=GenBank:WP_034195341.1;Name=WP_034195341.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478574.1;locus_tag=LDO38_RS01690;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_034195341.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 117306 118304 . - . ID=gene-LDO38_RS01695;Name=LDO38_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01695;old_locus_tag=BVI2075_110119 NZ_CAJZAL010000013.1 Protein Homology CDS 117306 118304 . - 0 ID=cds-WP_034195340.1;Parent=gene-LDO38_RS01695;Dbxref=GenBank:WP_034195340.1;Name=WP_034195340.1;Ontology_term=GO:0015940,GO:0008677,GO:0050661;gbkey=CDS;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA,NADP binding|0050661||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213186.1;locus_tag=LDO38_RS01695;product=2-dehydropantoate 2-reductase;protein_id=WP_034195340.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 118657 118887 . + . ID=gene-LDO38_RS01700;Name=LDO38_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01700;old_locus_tag=BVI2075_110120 NZ_CAJZAL010000013.1 Protein Homology CDS 118657 118887 . + 0 ID=cds-WP_014723172.1;Parent=gene-LDO38_RS01700;Dbxref=GenBank:WP_014723172.1;Name=WP_014723172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402226.1;locus_tag=LDO38_RS01700;product=hypothetical protein;protein_id=WP_014723172.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 119122 119307 . + . ID=gene-LDO38_RS01705;Name=LDO38_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01705 NZ_CAJZAL010000013.1 GeneMarkS-2+ CDS 119122 119307 . + 0 ID=cds-WP_124259636.1;Parent=gene-LDO38_RS01705;Dbxref=GenBank:WP_124259636.1;Name=WP_124259636.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS01705;product=hypothetical protein;protein_id=WP_124259636.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 119317 120024 . + . ID=gene-LDO38_RS01710;Name=LDO38_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01710;old_locus_tag=BVI2075_110121 NZ_CAJZAL010000013.1 Protein Homology CDS 119317 120024 . + 0 ID=cds-WP_175464248.1;Parent=gene-LDO38_RS01710;Dbxref=GenBank:WP_175464248.1;Name=WP_175464248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017776710.1;locus_tag=LDO38_RS01710;product=hypothetical protein;protein_id=WP_175464248.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq pseudogene 119954 120147 . + . ID=gene-LDO38_RS01715;Name=LDO38_RS01715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS01715;partial=true;pseudo=true;start_range=.,119954 NZ_CAJZAL010000013.1 Protein Homology CDS 119954 120147 . + 0 ID=cds-LDO38_RS01715;Parent=gene-LDO38_RS01715;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611734.1;locus_tag=LDO38_RS01715;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,119954;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 120919 121155 . + . ID=gene-LDO38_RS01720;Name=LDO38_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01720;old_locus_tag=BVI2075_110123 NZ_CAJZAL010000013.1 Protein Homology CDS 120919 121155 . + 0 ID=cds-WP_034195338.1;Parent=gene-LDO38_RS01720;Dbxref=GenBank:WP_034195338.1;Name=WP_034195338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661270.1;locus_tag=LDO38_RS01720;product=hypothetical protein;protein_id=WP_034195338.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 121229 121426 . + . ID=gene-LDO38_RS01725;Name=LDO38_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01725;old_locus_tag=BVI2075_110124 NZ_CAJZAL010000013.1 Protein Homology CDS 121229 121426 . + 0 ID=cds-WP_014723174.1;Parent=gene-LDO38_RS01725;Dbxref=GenBank:WP_014723174.1;Name=WP_014723174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328164.1;locus_tag=LDO38_RS01725;product=hypothetical protein;protein_id=WP_014723174.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 121446 121661 . - . ID=gene-LDO38_RS01730;Name=LDO38_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01730;old_locus_tag=BVI2075_110125 NZ_CAJZAL010000013.1 GeneMarkS-2+ CDS 121446 121661 . - 0 ID=cds-WP_124259635.1;Parent=gene-LDO38_RS01730;Dbxref=GenBank:WP_124259635.1;Name=WP_124259635.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS01730;product=hypothetical protein;protein_id=WP_124259635.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 121759 122022 . - . ID=gene-LDO38_RS01735;Name=LDO38_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01735;old_locus_tag=BVI2075_110126 NZ_CAJZAL010000013.1 GeneMarkS-2+ CDS 121759 122022 . - 0 ID=cds-WP_041493845.1;Parent=gene-LDO38_RS01735;Dbxref=GenBank:WP_041493845.1;Name=WP_041493845.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS01735;product=hypothetical protein;protein_id=WP_041493845.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 122054 123229 . - . ID=gene-LDO38_RS01740;Name=LDO38_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01740;old_locus_tag=BVI2075_110127 NZ_CAJZAL010000013.1 Protein Homology CDS 122054 123229 . - 0 ID=cds-WP_014723175.1;Parent=gene-LDO38_RS01740;Dbxref=GenBank:WP_014723175.1;Name=WP_014723175.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723175.1;locus_tag=LDO38_RS01740;product=tyrosine-type recombinase/integrase;protein_id=WP_014723175.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 123404 123490 . - . ID=gene-LDO38_RS01745;Name=LDO38_RS01745;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS01745;old_locus_tag=BVI2075_TRNA44 NZ_CAJZAL010000013.1 tRNAscan-SE tRNA 123404 123490 . - . ID=rna-LDO38_RS01745;Parent=gene-LDO38_RS01745;anticodon=(pos:complement(123454..123456));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS01745;product=tRNA-Leu NZ_CAJZAL010000013.1 tRNAscan-SE exon 123404 123490 . - . ID=exon-LDO38_RS01745-1;Parent=rna-LDO38_RS01745;anticodon=(pos:complement(123454..123456));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS01745;product=tRNA-Leu NZ_CAJZAL010000013.1 RefSeq gene 123732 124565 . + . ID=gene-LDO38_RS01750;Name=hpnD;gbkey=Gene;gene=hpnD;gene_biotype=protein_coding;locus_tag=LDO38_RS01750;old_locus_tag=BVI2075_110129 NZ_CAJZAL010000013.1 Protein Homology CDS 123732 124565 . + 0 ID=cds-WP_014723176.1;Parent=gene-LDO38_RS01750;Dbxref=GenBank:WP_014723176.1;Name=WP_014723176.1;Ontology_term=GO:0016117,GO:0046905;gbkey=CDS;gene=hpnD;go_function=15-cis-phytoene synthase activity|0046905||IEA;go_process=carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723176.1;locus_tag=LDO38_RS01750;product=presqualene diphosphate synthase HpnD;protein_id=WP_014723176.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 124576 125784 . - . ID=gene-LDO38_RS01755;Name=LDO38_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01755;old_locus_tag=BVI2075_110130 NZ_CAJZAL010000013.1 Protein Homology CDS 124576 125784 . - 0 ID=cds-WP_034195334.1;Parent=gene-LDO38_RS01755;Dbxref=GenBank:WP_034195334.1;Name=WP_034195334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752035.1;locus_tag=LDO38_RS01755;product=DUF1501 domain-containing protein;protein_id=WP_034195334.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 125852 127354 . - . ID=gene-LDO38_RS01760;Name=LDO38_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01760;old_locus_tag=BVI2075_110131 NZ_CAJZAL010000013.1 Protein Homology CDS 125852 127354 . - 0 ID=cds-WP_046426944.1;Parent=gene-LDO38_RS01760;Dbxref=GenBank:WP_046426944.1;Name=WP_046426944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549599.1;locus_tag=LDO38_RS01760;product=DUF1800 domain-containing protein;protein_id=WP_046426944.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 127475 127753 . - . ID=gene-LDO38_RS01765;Name=LDO38_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01765;old_locus_tag=BVI2075_110132 NZ_CAJZAL010000013.1 Protein Homology CDS 127475 127753 . - 0 ID=cds-WP_014723178.1;Parent=gene-LDO38_RS01765;Dbxref=GenBank:WP_014723178.1;Name=WP_014723178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352385.1;locus_tag=LDO38_RS01765;product=hypothetical protein;protein_id=WP_014723178.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 128011 128745 . + . ID=gene-LDO38_RS01770;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=LDO38_RS01770;old_locus_tag=BVI2075_110133 NZ_CAJZAL010000013.1 Protein Homology CDS 128011 128745 . + 0 ID=cds-WP_004192636.1;Parent=gene-LDO38_RS01770;Dbxref=GenBank:WP_004192636.1;Name=WP_004192636.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009517537.1;locus_tag=LDO38_RS01770;product=osmolarity response regulator transcription factor OmpR;protein_id=WP_004192636.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 128786 130147 . + . ID=gene-LDO38_RS01775;Name=LDO38_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01775;old_locus_tag=BVI2075_110134 NZ_CAJZAL010000013.1 Protein Homology CDS 128786 130147 . + 0 ID=cds-WP_045578996.1;Parent=gene-LDO38_RS01775;Dbxref=GenBank:WP_045578996.1;Name=WP_045578996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364087.1;locus_tag=LDO38_RS01775;product=ATP-binding protein;protein_id=WP_045578996.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 130337 130885 . + . ID=gene-LDO38_RS01780;Name=LDO38_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01780;old_locus_tag=BVI2075_110136 NZ_CAJZAL010000013.1 Protein Homology CDS 130337 130885 . + 0 ID=cds-WP_045578995.1;Parent=gene-LDO38_RS01780;Dbxref=GenBank:WP_045578995.1;Name=WP_045578995.1;Ontology_term=GO:0008379;gbkey=CDS;go_function=thioredoxin peroxidase activity|0008379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192241.1;locus_tag=LDO38_RS01780;product=peroxiredoxin;protein_id=WP_045578995.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 130962 131489 . + . ID=gene-LDO38_RS01785;Name=LDO38_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01785;old_locus_tag=BVI2075_110137 NZ_CAJZAL010000013.1 Protein Homology CDS 130962 131489 . + 0 ID=cds-WP_011885089.1;Parent=gene-LDO38_RS01785;Dbxref=GenBank:WP_011885089.1;Name=WP_011885089.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760961.1;locus_tag=LDO38_RS01785;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_011885089.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 131622 132098 . - . ID=gene-LDO38_RS01790;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=LDO38_RS01790;old_locus_tag=BVI2075_110138 NZ_CAJZAL010000013.1 Protein Homology CDS 131622 132098 . - 0 ID=cds-WP_011885090.1;Parent=gene-LDO38_RS01790;Dbxref=GenBank:WP_011885090.1;Name=WP_011885090.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723181.1;locus_tag=LDO38_RS01790;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_011885090.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 132127 132837 . - . ID=gene-LDO38_RS01795;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=LDO38_RS01795;old_locus_tag=BVI2075_110139 NZ_CAJZAL010000013.1 Protein Homology CDS 132127 132837 . - 0 ID=cds-WP_011885091.1;Parent=gene-LDO38_RS01795;Dbxref=GenBank:WP_011885091.1;Name=WP_011885091.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402218.1;locus_tag=LDO38_RS01795;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_011885091.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 132946 136401 . + . ID=gene-LDO38_RS01800;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=LDO38_RS01800;old_locus_tag=BVI2075_110140 NZ_CAJZAL010000013.1 Protein Homology CDS 132946 136401 . + 0 ID=cds-WP_011885092.1;Parent=gene-LDO38_RS01800;Dbxref=GenBank:WP_011885092.1;Name=WP_011885092.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415640.1;locus_tag=LDO38_RS01800;product=transcription-repair coupling factor;protein_id=WP_011885092.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 136520 137740 . + . ID=gene-LDO38_RS01805;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=LDO38_RS01805;old_locus_tag=BVI2075_110141 NZ_CAJZAL010000013.1 Protein Homology CDS 136520 137740 . + 0 ID=cds-WP_011885093.1;Parent=gene-LDO38_RS01805;Dbxref=GenBank:WP_011885093.1;Name=WP_011885093.1;Ontology_term=GO:0006526,GO:0006592,GO:0008777;gbkey=CDS;gene=argE;go_function=acetylornithine deacetylase activity|0008777||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896786.1;locus_tag=LDO38_RS01805;product=acetylornithine deacetylase;protein_id=WP_011885093.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 137797 138816 . + . ID=gene-LDO38_RS01810;Name=LDO38_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01810;old_locus_tag=BVI2075_110142 NZ_CAJZAL010000013.1 Protein Homology CDS 137797 138816 . + 0 ID=cds-WP_069224236.1;Parent=gene-LDO38_RS01810;Dbxref=GenBank:WP_069224236.1;Name=WP_069224236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213175.1;locus_tag=LDO38_RS01810;product=threonine/serine dehydratase;protein_id=WP_069224236.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 139219 141744 . - . ID=gene-LDO38_RS01815;Name=LDO38_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01815;old_locus_tag=BVI2075_110143 NZ_CAJZAL010000013.1 Protein Homology CDS 139219 141744 . - 0 ID=cds-WP_124259634.1;Parent=gene-LDO38_RS01815;Dbxref=GenBank:WP_124259634.1;Name=WP_124259634.1;Ontology_term=GO:0006508,GO:0009252,GO:0008658,GO:0008955,GO:0009002;gbkey=CDS;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415646.1;locus_tag=LDO38_RS01815;product=penicillin-binding protein 1A;protein_id=WP_124259634.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 142183 142863 . + . ID=gene-LDO38_RS01820;Name=LDO38_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01820;old_locus_tag=BVI2075_110145 NZ_CAJZAL010000013.1 Protein Homology CDS 142183 142863 . + 0 ID=cds-WP_011885096.1;Parent=gene-LDO38_RS01820;Dbxref=GenBank:WP_011885096.1;Name=WP_011885096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193810.1;locus_tag=LDO38_RS01820;product=PspA/IM30 family protein;protein_id=WP_011885096.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 142939 144111 . + . ID=gene-LDO38_RS01825;Name=LDO38_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01825;old_locus_tag=BVI2075_110146 NZ_CAJZAL010000013.1 Protein Homology CDS 142939 144111 . + 0 ID=cds-WP_043291709.1;Parent=gene-LDO38_RS01825;Dbxref=GenBank:WP_043291709.1;Name=WP_043291709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467640.1;locus_tag=LDO38_RS01825;product=tetratricopeptide repeat protein;protein_id=WP_043291709.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 144336 144767 . + . ID=gene-LDO38_RS01830;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=LDO38_RS01830;old_locus_tag=BVI2075_110144 NZ_CAJZAL010000013.1 Protein Homology CDS 144336 144767 . + 0 ID=cds-WP_011885098.1;Parent=gene-LDO38_RS01830;Dbxref=GenBank:WP_011885098.1;Name=WP_011885098.1;Ontology_term=GO:0034220,GO:0008381,GO:0016020;gbkey=CDS;gene=mscL;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487991.1;locus_tag=LDO38_RS01830;product=large conductance mechanosensitive channel protein MscL;protein_id=WP_011885098.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 145110 145556 . + . ID=gene-LDO38_RS01835;Name=LDO38_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01835;old_locus_tag=BVI2075_110147 NZ_CAJZAL010000013.1 Protein Homology CDS 145110 145556 . + 0 ID=cds-WP_014723190.1;Parent=gene-LDO38_RS01835;Dbxref=GenBank:WP_014723190.1;Name=WP_014723190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331909.1;locus_tag=LDO38_RS01835;product=hypothetical protein;protein_id=WP_014723190.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 145631 146524 . - . ID=gene-LDO38_RS01840;Name=LDO38_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01840;old_locus_tag=BVI2075_110148 NZ_CAJZAL010000013.1 Protein Homology CDS 145631 146524 . - 0 ID=cds-WP_124259633.1;Parent=gene-LDO38_RS01840;Dbxref=GenBank:WP_124259633.1;Name=WP_124259633.1;Ontology_term=GO:0016491,GO:0050661,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723191.1;locus_tag=LDO38_RS01840;product=NAD(P)-dependent oxidoreductase;protein_id=WP_124259633.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 146658 146867 . + . ID=gene-LDO38_RS01845;Name=LDO38_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01845;old_locus_tag=BVI2075_110150 NZ_CAJZAL010000013.1 Protein Homology CDS 146658 146867 . + 0 ID=cds-WP_006755984.1;Parent=gene-LDO38_RS01845;Dbxref=GenBank:WP_006755984.1;Name=WP_006755984.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890522.1;locus_tag=LDO38_RS01845;product=dodecin;protein_id=WP_006755984.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 147083 148012 . + . ID=gene-LDO38_RS01850;Name=LDO38_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01850;old_locus_tag=BVI2075_110149 NZ_CAJZAL010000013.1 Protein Homology CDS 147083 148012 . + 0 ID=cds-WP_011885102.1;Parent=gene-LDO38_RS01850;Dbxref=GenBank:WP_011885102.1;Name=WP_011885102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698381.1;locus_tag=LDO38_RS01850;product=LysR substrate-binding domain-containing protein;protein_id=WP_011885102.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 148076 149488 . - . ID=gene-LDO38_RS01855;Name=LDO38_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01855;old_locus_tag=BVI2075_110151 NZ_CAJZAL010000013.1 Protein Homology CDS 148076 149488 . - 0 ID=cds-WP_034195415.1;Parent=gene-LDO38_RS01855;Dbxref=GenBank:WP_034195415.1;Name=WP_034195415.1;Ontology_term=GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754392.1;locus_tag=LDO38_RS01855;product=8-oxoguanine deaminase;protein_id=WP_034195415.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 149969 150322 . + . ID=gene-LDO38_RS01860;Name=uraH;gbkey=Gene;gene=uraH;gene_biotype=protein_coding;locus_tag=LDO38_RS01860;old_locus_tag=BVI2075_110154 NZ_CAJZAL010000013.1 Protein Homology CDS 149969 150322 . + 0 ID=cds-WP_046426965.1;Parent=gene-LDO38_RS01860;Dbxref=GenBank:WP_046426965.1;Name=WP_046426965.1;Ontology_term=GO:0006144,GO:0033971;gbkey=CDS;gene=uraH;go_function=hydroxyisourate hydrolase activity|0033971||IEA;go_process=purine nucleobase metabolic process|0006144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495593.1;locus_tag=LDO38_RS01860;product=hydroxyisourate hydrolase;protein_id=WP_046426965.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 150376 151569 . + . ID=gene-LDO38_RS01865;Name=LDO38_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01865;old_locus_tag=BVI2075_110155 NZ_CAJZAL010000013.1 Protein Homology CDS 150376 151569 . + 0 ID=cds-WP_011885105.1;Parent=gene-LDO38_RS01865;Dbxref=GenBank:WP_011885105.1;Name=WP_011885105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521221.1;locus_tag=LDO38_RS01865;product=urate hydroxylase PuuD;protein_id=WP_011885105.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 152151 152348 . - . ID=gene-LDO38_RS01870;Name=LDO38_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01870;old_locus_tag=BVI2075_110156 NZ_CAJZAL010000013.1 GeneMarkS-2+ CDS 152151 152348 . - 0 ID=cds-WP_124259632.1;Parent=gene-LDO38_RS01870;Dbxref=GenBank:WP_124259632.1;Name=WP_124259632.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS01870;product=hypothetical protein;protein_id=WP_124259632.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 152408 152920 . - . ID=gene-LDO38_RS01875;Name=LDO38_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01875;old_locus_tag=BVI2075_110157 NZ_CAJZAL010000013.1 Protein Homology CDS 152408 152920 . - 0 ID=cds-WP_011885106.1;Parent=gene-LDO38_RS01875;Dbxref=GenBank:WP_011885106.1;Name=WP_011885106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885106.1;locus_tag=LDO38_RS01875;product=ureidoglycolate lyase;protein_id=WP_011885106.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 152917 153927 . - . ID=gene-LDO38_RS01880;Name=alc;gbkey=Gene;gene=alc;gene_biotype=protein_coding;locus_tag=LDO38_RS01880;old_locus_tag=BVI2075_110158 NZ_CAJZAL010000013.1 Protein Homology CDS 152917 153927 . - 0 ID=cds-WP_059463345.1;Parent=gene-LDO38_RS01880;Dbxref=GenBank:WP_059463345.1;Name=WP_059463345.1;Ontology_term=GO:0000256,GO:0004037;gbkey=CDS;gene=alc;go_function=allantoicase activity|0004037||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909169.1;locus_tag=LDO38_RS01880;product=allantoicase;protein_id=WP_059463345.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 153974 154495 . - . ID=gene-LDO38_RS01885;Name=uraD;gbkey=Gene;gene=uraD;gene_biotype=protein_coding;locus_tag=LDO38_RS01885;old_locus_tag=BVI2075_110159 NZ_CAJZAL010000013.1 Protein Homology CDS 153974 154495 . - 0 ID=cds-WP_011885108.1;Parent=gene-LDO38_RS01885;Dbxref=GenBank:WP_011885108.1;Name=WP_011885108.1;Ontology_term=GO:0000255;gbkey=CDS;gene=uraD;go_process=allantoin metabolic process|0000255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364104.1;locus_tag=LDO38_RS01885;product=2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase;protein_id=WP_011885108.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 154492 155445 . - . ID=gene-LDO38_RS01890;Name=puuE;gbkey=Gene;gene=puuE;gene_biotype=protein_coding;locus_tag=LDO38_RS01890;old_locus_tag=BVI2075_110160 NZ_CAJZAL010000013.1 Protein Homology CDS 154492 155445 . - 0 ID=cds-WP_043291112.1;Parent=gene-LDO38_RS01890;Dbxref=GenBank:WP_043291112.1;Name=WP_043291112.1;Ontology_term=GO:0000256,GO:0016810;gbkey=CDS;gene=puuE;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407670.1;locus_tag=LDO38_RS01890;product=allantoinase PuuE;protein_id=WP_043291112.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 155596 156429 . - . ID=gene-LDO38_RS01895;Name=LDO38_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01895;old_locus_tag=BVI2075_110161 NZ_CAJZAL010000013.1 Protein Homology CDS 155596 156429 . - 0 ID=cds-WP_014723197.1;Parent=gene-LDO38_RS01895;Dbxref=GenBank:WP_014723197.1;Name=WP_014723197.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490202.1;locus_tag=LDO38_RS01895;product=aspartate/glutamate racemase family protein;protein_id=WP_014723197.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 156440 157924 . - . ID=gene-LDO38_RS01900;Name=LDO38_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01900;old_locus_tag=BVI2075_110162 NZ_CAJZAL010000013.1 Protein Homology CDS 156440 157924 . - 0 ID=cds-WP_059568341.1;Parent=gene-LDO38_RS01900;Dbxref=GenBank:WP_059568341.1;Name=WP_059568341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549579.1;locus_tag=LDO38_RS01900;product=NCS1 family nucleobase:cation symporter-1;protein_id=WP_059568341.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 158074 158778 . - . ID=gene-LDO38_RS01905;Name=LDO38_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01905;old_locus_tag=BVI2075_110163 NZ_CAJZAL010000013.1 Protein Homology CDS 158074 158778 . - 0 ID=cds-WP_011885112.1;Parent=gene-LDO38_RS01905;Dbxref=GenBank:WP_011885112.1;Name=WP_011885112.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364108.1;locus_tag=LDO38_RS01905;product=GntR family transcriptional regulator;protein_id=WP_011885112.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 159087 160025 . - . ID=gene-LDO38_RS01910;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=LDO38_RS01910;old_locus_tag=BVI2075_110165 NZ_CAJZAL010000013.1 Protein Homology CDS 159087 160025 . - 0 ID=cds-WP_059669242.1;Parent=gene-LDO38_RS01910;Dbxref=GenBank:WP_059669242.1;Name=WP_059669242.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549577.1;locus_tag=LDO38_RS01910;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_059669242.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 160135 160728 . - . ID=gene-LDO38_RS01915;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=LDO38_RS01915;old_locus_tag=BVI2075_110166 NZ_CAJZAL010000013.1 Protein Homology CDS 160135 160728 . - 0 ID=cds-WP_124259631.1;Parent=gene-LDO38_RS01915;Dbxref=GenBank:WP_124259631.1;Name=WP_124259631.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495582.1;locus_tag=LDO38_RS01915;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_124259631.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 160725 161126 . - . ID=gene-LDO38_RS01920;Name=LDO38_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01920;old_locus_tag=BVI2075_110167 NZ_CAJZAL010000013.1 Protein Homology CDS 160725 161126 . - 0 ID=cds-WP_011885115.1;Parent=gene-LDO38_RS01920;Dbxref=GenBank:WP_011885115.1;Name=WP_011885115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193068.1;locus_tag=LDO38_RS01920;product=DnaJ family domain-containing protein;protein_id=WP_011885115.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 161427 162827 . - . ID=gene-LDO38_RS01925;Name=guaA;end_range=162827,.;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=LDO38_RS01925;old_locus_tag=BVI2075_110168;partial=true NZ_CAJZAL010000013.1 Protein Homology CDS 161427 162827 . - 0 ID=cds-WP_224019987.1;Parent=gene-LDO38_RS01925;Dbxref=GenBank:WP_224019987.1;Name=WP_224019987.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;end_range=162827,.;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402676.1;locus_tag=LDO38_RS01925;partial=true;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_224019987.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq pseudogene 162838 162907 . - . ID=gene-LDO38_RS30255;Name=LDO38_RS30255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30255;old_locus_tag=BVI2075_110169;partial=true;pseudo=true;start_range=.,162838 NZ_CAJZAL010000013.1 Protein Homology CDS 162838 162907 . - 0 ID=cds-LDO38_RS30255;Parent=gene-LDO38_RS30255;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402676.1;locus_tag=LDO38_RS30255;partial=true;product=glutamine amidotransferase-related protein;pseudo=true;start_range=.,162838;transl_table=11 NZ_CAJZAL010000013.1 RefSeq pseudogene 163015 163591 . - . ID=gene-LDO38_RS01930;Name=LDO38_RS01930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS01930;old_locus_tag=BVI2075_110170;pseudo=true NZ_CAJZAL010000013.1 Protein Homology CDS 163015 163591 . - 0 ID=cds-LDO38_RS01930;Parent=gene-LDO38_RS01930;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761440.1;locus_tag=LDO38_RS01930;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 163598 165058 . - . ID=gene-LDO38_RS01935;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=LDO38_RS01935;old_locus_tag=BVI2075_110171 NZ_CAJZAL010000013.1 Protein Homology CDS 163598 165058 . - 0 ID=cds-WP_011885118.1;Parent=gene-LDO38_RS01935;Dbxref=GenBank:WP_011885118.1;Name=WP_011885118.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065652.1;locus_tag=LDO38_RS01935;product=IMP dehydrogenase;protein_id=WP_011885118.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 165110 165334 . - . ID=gene-LDO38_RS01940;Name=LDO38_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01940;old_locus_tag=BVI2075_110172 NZ_CAJZAL010000013.1 GeneMarkS-2+ CDS 165110 165334 . - 0 ID=cds-WP_034195319.1;Parent=gene-LDO38_RS01940;Dbxref=GenBank:WP_034195319.1;Name=WP_034195319.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS01940;product=hypothetical protein;protein_id=WP_034195319.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 165353 166180 . - . ID=gene-LDO38_RS01945;Name=LDO38_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01945;old_locus_tag=BVI2075_110173 NZ_CAJZAL010000013.1 Protein Homology CDS 165353 166180 . - 0 ID=cds-WP_034195318.1;Parent=gene-LDO38_RS01945;Dbxref=GenBank:WP_034195318.1;Name=WP_034195318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723202.1;locus_tag=LDO38_RS01945;product=DUF2182 domain-containing protein;protein_id=WP_034195318.1;transl_table=11 NZ_CAJZAL010000013.1 RefSeq gene 166196 166960 . - . ID=gene-LDO38_RS01950;Name=LDO38_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01950;old_locus_tag=BVI2075_110174 NZ_CAJZAL010000013.1 Protein Homology CDS 166196 166960 . - 0 ID=cds-WP_059991486.1;Parent=gene-LDO38_RS01950;Dbxref=GenBank:WP_059991486.1;Name=WP_059991486.1;Ontology_term=GO:0015035,GO:0015036;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA,disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885120.1;locus_tag=LDO38_RS01950;product=DUF899 domain-containing protein;protein_id=WP_059991486.1;transl_table=11 ##sequence-region NZ_CAJZAL010000014.1 1 37508 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000014.1 RefSeq region 1 37508 . + . ID=NZ_CAJZAL010000014.1:1..37508;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_110 NZ_CAJZAL010000014.1 RefSeq gene 1 765 . + . ID=gene-LDO38_RS01955;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=LDO38_RS01955;old_locus_tag=BVI2075_1100001;partial=true;start_range=.,1 NZ_CAJZAL010000014.1 Protein Homology CDS 1 765 . + 0 ID=cds-WP_224056159.1;Parent=gene-LDO38_RS01955;Dbxref=GenBank:WP_224056159.1;Name=WP_224056159.1;Ontology_term=GO:0015628,GO:0009276,GO:0015627;gbkey=CDS;gene=gspL;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533517.1;locus_tag=LDO38_RS01955;partial=true;product=type II secretion system protein GspL;protein_id=WP_224056159.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 762 1268 . + . ID=gene-LDO38_RS01960;Name=gspM;gbkey=Gene;gene=gspM;gene_biotype=protein_coding;locus_tag=LDO38_RS01960;old_locus_tag=BVI2075_1100002 NZ_CAJZAL010000014.1 Protein Homology CDS 762 1268 . + 0 ID=cds-WP_011882766.1;Parent=gene-LDO38_RS01960;Dbxref=GenBank:WP_011882766.1;Name=WP_011882766.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspM;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327581.1;locus_tag=LDO38_RS01960;product=type II secretion system protein GspM;protein_id=WP_011882766.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 1300 2088 . + . ID=gene-LDO38_RS01965;Name=gspN;gbkey=Gene;gene=gspN;gene_biotype=protein_coding;locus_tag=LDO38_RS01965;old_locus_tag=BVI2075_1100003 NZ_CAJZAL010000014.1 Protein Homology CDS 1300 2088 . + 0 ID=cds-WP_059621838.1;Parent=gene-LDO38_RS01965;Dbxref=GenBank:WP_059621838.1;Name=WP_059621838.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspN;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750440.1;locus_tag=LDO38_RS01965;product=type II secretion system protein N;protein_id=WP_059621838.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 2117 3652 . - . ID=gene-LDO38_RS01970;Name=LDO38_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01970;old_locus_tag=BVI2075_1100004 NZ_CAJZAL010000014.1 Protein Homology CDS 2117 3652 . - 0 ID=cds-WP_046425502.1;Parent=gene-LDO38_RS01970;Dbxref=GenBank:WP_046425502.1;Name=WP_046425502.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544458.1;locus_tag=LDO38_RS01970;product=efflux transporter outer membrane subunit;protein_id=WP_046425502.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 3940 4233 . - . ID=gene-LDO38_RS01975;Name=LDO38_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01975;old_locus_tag=BVI2075_1100005 NZ_CAJZAL010000014.1 Protein Homology CDS 3940 4233 . - 0 ID=cds-WP_011882763.1;Parent=gene-LDO38_RS01975;Dbxref=GenBank:WP_011882763.1;Name=WP_011882763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750438.1;locus_tag=LDO38_RS01975;product=hypothetical protein;protein_id=WP_011882763.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 4407 4904 . + . ID=gene-LDO38_RS01980;Name=LDO38_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01980;old_locus_tag=BVI2075_1100006 NZ_CAJZAL010000014.1 Protein Homology CDS 4407 4904 . + 0 ID=cds-WP_011882762.1;Parent=gene-LDO38_RS01980;Dbxref=GenBank:WP_011882762.1;Name=WP_011882762.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882762.1;locus_tag=LDO38_RS01980;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_011882762.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 5080 6642 . + . ID=gene-LDO38_RS01985;Name=LDO38_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01985;old_locus_tag=BVI2075_1100007 NZ_CAJZAL010000014.1 Protein Homology CDS 5080 6642 . + 0 ID=cds-WP_045578649.1;Parent=gene-LDO38_RS01985;Dbxref=GenBank:WP_045578649.1;Name=WP_045578649.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416603.1;locus_tag=LDO38_RS01985;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_045578649.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 6769 7695 . - . ID=gene-LDO38_RS01990;Name=LDO38_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01990;old_locus_tag=BVI2075_1100008 NZ_CAJZAL010000014.1 Protein Homology CDS 6769 7695 . - 0 ID=cds-WP_011882760.1;Parent=gene-LDO38_RS01990;Dbxref=GenBank:WP_011882760.1;Name=WP_011882760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477236.1;locus_tag=LDO38_RS01990;product=LysR family transcriptional regulator;protein_id=WP_011882760.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 7834 8310 . + . ID=gene-LDO38_RS01995;Name=LDO38_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS01995;old_locus_tag=BVI2075_1100009 NZ_CAJZAL010000014.1 Protein Homology CDS 7834 8310 . + 0 ID=cds-WP_011882759.1;Parent=gene-LDO38_RS01995;Dbxref=GenBank:WP_011882759.1;Name=WP_011882759.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882759.1;locus_tag=LDO38_RS01995;product=CidA/LrgA family protein;protein_id=WP_011882759.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 8324 9046 . + . ID=gene-LDO38_RS02000;Name=LDO38_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02000;old_locus_tag=BVI2075_1100010 NZ_CAJZAL010000014.1 Protein Homology CDS 8324 9046 . + 0 ID=cds-WP_059568046.1;Parent=gene-LDO38_RS02000;Dbxref=GenBank:WP_059568046.1;Name=WP_059568046.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895445.1;locus_tag=LDO38_RS02000;product=LrgB family protein;protein_id=WP_059568046.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 9269 9805 . + . ID=gene-LDO38_RS02005;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=LDO38_RS02005;old_locus_tag=BVI2075_1100011 NZ_CAJZAL010000014.1 Protein Homology CDS 9269 9805 . + 0 ID=cds-WP_045578651.1;Parent=gene-LDO38_RS02005;Dbxref=GenBank:WP_045578651.1;Name=WP_045578651.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750432.1;locus_tag=LDO38_RS02005;product=flagellar basal body-associated protein FliL;protein_id=WP_045578651.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 9828 10826 . + . ID=gene-LDO38_RS02010;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=LDO38_RS02010;old_locus_tag=BVI2075_1100012 NZ_CAJZAL010000014.1 Protein Homology CDS 9828 10826 . + 0 ID=cds-WP_011882756.1;Parent=gene-LDO38_RS02010;Dbxref=GenBank:WP_011882756.1;Name=WP_011882756.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524547.1;locus_tag=LDO38_RS02010;product=flagellar motor switch protein FliM;protein_id=WP_011882756.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 10819 11337 . + . ID=gene-LDO38_RS02015;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=LDO38_RS02015;old_locus_tag=BVI2075_1100013 NZ_CAJZAL010000014.1 Protein Homology CDS 10819 11337 . + 0 ID=cds-WP_059460845.1;Parent=gene-LDO38_RS02015;Dbxref=GenBank:WP_059460845.1;Name=WP_059460845.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544466.1;locus_tag=LDO38_RS02015;product=flagellar motor switch protein FliN;protein_id=WP_059460845.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 11334 11903 . + . ID=gene-LDO38_RS02020;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=LDO38_RS02020;old_locus_tag=BVI2075_1100014 NZ_CAJZAL010000014.1 Protein Homology CDS 11334 11903 . + 0 ID=cds-WP_014722131.1;Parent=gene-LDO38_RS02020;Dbxref=GenBank:WP_014722131.1;Name=WP_014722131.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495402.1;locus_tag=LDO38_RS02020;product=flagellar biosynthetic protein FliO;protein_id=WP_014722131.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 11940 12701 . + . ID=gene-LDO38_RS02025;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=LDO38_RS02025;old_locus_tag=BVI2075_1100015 NZ_CAJZAL010000014.1 Protein Homology CDS 11940 12701 . + 0 ID=cds-WP_011882753.1;Parent=gene-LDO38_RS02025;Dbxref=GenBank:WP_011882753.1;Name=WP_011882753.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011325008.1;locus_tag=LDO38_RS02025;product=flagellar type III secretion system pore protein FliP;protein_id=WP_011882753.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 12717 12989 . + . ID=gene-LDO38_RS02030;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=LDO38_RS02030;old_locus_tag=BVI2075_1100016 NZ_CAJZAL010000014.1 Protein Homology CDS 12717 12989 . + 0 ID=cds-WP_011882752.1;Parent=gene-LDO38_RS02030;Dbxref=GenBank:WP_011882752.1;Name=WP_011882752.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199882.1;locus_tag=LDO38_RS02030;product=flagellar biosynthesis protein FliQ;protein_id=WP_011882752.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 13018 13800 . + . ID=gene-LDO38_RS02035;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=LDO38_RS02035;old_locus_tag=BVI2075_1100017 NZ_CAJZAL010000014.1 Protein Homology CDS 13018 13800 . + 0 ID=cds-WP_014722130.1;Parent=gene-LDO38_RS02035;Dbxref=GenBank:WP_014722130.1;Name=WP_014722130.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491278.1;locus_tag=LDO38_RS02035;product=flagellar biosynthetic protein FliR;protein_id=WP_014722130.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 13946 14950 . + . ID=gene-LDO38_RS02040;Name=LDO38_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02040;old_locus_tag=BVI2075_1100018 NZ_CAJZAL010000014.1 Protein Homology CDS 13946 14950 . + 0 ID=cds-WP_059460847.1;Parent=gene-LDO38_RS02040;Dbxref=GenBank:WP_059460847.1;Name=WP_059460847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202867.1;locus_tag=LDO38_RS02040;product=ABC transporter substrate-binding protein;protein_id=WP_059460847.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 15086 15883 . + . ID=gene-LDO38_RS02045;Name=LDO38_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02045;old_locus_tag=BVI2075_1100019 NZ_CAJZAL010000014.1 Protein Homology CDS 15086 15883 . + 0 ID=cds-WP_011882749.1;Parent=gene-LDO38_RS02045;Dbxref=GenBank:WP_011882749.1;Name=WP_011882749.1;Ontology_term=GO:0006810,GO:0005215,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750416.1;locus_tag=LDO38_RS02045;product=ABC transporter ATP-binding protein;protein_id=WP_011882749.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 15929 16786 . + . ID=gene-LDO38_RS02050;Name=LDO38_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02050;old_locus_tag=BVI2075_1100020 NZ_CAJZAL010000014.1 Protein Homology CDS 15929 16786 . + 0 ID=cds-WP_011882748.1;Parent=gene-LDO38_RS02050;Dbxref=GenBank:WP_011882748.1;Name=WP_011882748.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882748.1;locus_tag=LDO38_RS02050;product=ABC transporter permease;protein_id=WP_011882748.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 16867 18234 . + . ID=gene-LDO38_RS02055;Name=LDO38_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02055;old_locus_tag=BVI2075_1100022 NZ_CAJZAL010000014.1 Protein Homology CDS 16867 18234 . + 0 ID=cds-WP_011882747.1;Parent=gene-LDO38_RS02055;Dbxref=GenBank:WP_011882747.1;Name=WP_011882747.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495405.1;locus_tag=LDO38_RS02055;product=sensor histidine kinase;protein_id=WP_011882747.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 18249 18926 . + . ID=gene-LDO38_RS02060;Name=LDO38_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02060;old_locus_tag=BVI2075_1100021 NZ_CAJZAL010000014.1 Protein Homology CDS 18249 18926 . + 0 ID=cds-WP_014722126.1;Parent=gene-LDO38_RS02060;Dbxref=GenBank:WP_014722126.1;Name=WP_014722126.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882746.1;locus_tag=LDO38_RS02060;product=response regulator;protein_id=WP_014722126.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 19215 20345 . + . ID=gene-LDO38_RS02065;Name=LDO38_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02065;old_locus_tag=BVI2075_1100023 NZ_CAJZAL010000014.1 Protein Homology CDS 19215 20345 . + 0 ID=cds-WP_034193009.1;Parent=gene-LDO38_RS02065;Dbxref=GenBank:WP_034193009.1;Name=WP_034193009.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895421.1;locus_tag=LDO38_RS02065;product=porin;protein_id=WP_034193009.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 20681 22699 . + . ID=gene-LDO38_RS02070;Name=LDO38_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02070;old_locus_tag=BVI2075_1100025 NZ_CAJZAL010000014.1 Protein Homology CDS 20681 22699 . + 0 ID=cds-WP_014722124.1;Parent=gene-LDO38_RS02070;Dbxref=GenBank:WP_014722124.1;Name=WP_014722124.1;Ontology_term=GO:0006306,GO:0009307,GO:0003677,GO:0008168,GO:0008170,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,N-methyltransferase activity|0008170||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=obsolete DNA methylation|0006306||IEA,DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722124.1;locus_tag=LDO38_RS02070;product=site-specific DNA-methyltransferase;protein_id=WP_014722124.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 22699 25725 . + . ID=gene-LDO38_RS02075;Name=LDO38_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02075;old_locus_tag=BVI2075_1100024 NZ_CAJZAL010000014.1 Protein Homology CDS 22699 25725 . + 0 ID=cds-WP_045578657.1;Parent=gene-LDO38_RS02075;Dbxref=GenBank:WP_045578657.1;Name=WP_045578657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722123.1;locus_tag=LDO38_RS02075;product=type III restriction-modification system endonuclease;protein_id=WP_045578657.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 25981 26373 . - . ID=gene-LDO38_RS02080;Name=LDO38_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02080;old_locus_tag=BVI2075_1100026 NZ_CAJZAL010000014.1 Protein Homology CDS 25981 26373 . - 0 ID=cds-WP_046425518.1;Parent=gene-LDO38_RS02080;Dbxref=GenBank:WP_046425518.1;Name=WP_046425518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750409.1;locus_tag=LDO38_RS02080;product=hypothetical protein;protein_id=WP_046425518.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 26562 26816 . - . ID=gene-LDO38_RS02085;Name=LDO38_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02085;old_locus_tag=BVI2075_1100027 NZ_CAJZAL010000014.1 Protein Homology CDS 26562 26816 . - 0 ID=cds-WP_034193013.1;Parent=gene-LDO38_RS02085;Dbxref=GenBank:WP_034193013.1;Name=WP_034193013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487314.1;locus_tag=LDO38_RS02085;product=glycine zipper 2TM domain protein;protein_id=WP_034193013.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 26873 27175 . - . ID=gene-LDO38_RS02090;Name=LDO38_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02090;old_locus_tag=BVI2075_1100028 NZ_CAJZAL010000014.1 Protein Homology CDS 26873 27175 . - 0 ID=cds-WP_011882740.1;Parent=gene-LDO38_RS02090;Dbxref=GenBank:WP_011882740.1;Name=WP_011882740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882740.1;locus_tag=LDO38_RS02090;product=hypothetical protein;protein_id=WP_011882740.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 27407 28420 . - . ID=gene-LDO38_RS02095;Name=egtD;gbkey=Gene;gene=egtD;gene_biotype=protein_coding;locus_tag=LDO38_RS02095;old_locus_tag=BVI2075_1100029 NZ_CAJZAL010000014.1 Protein Homology CDS 27407 28420 . - 0 ID=cds-WP_034193015.1;Parent=gene-LDO38_RS02095;Dbxref=GenBank:WP_034193015.1;Name=WP_034193015.1;Ontology_term=GO:0052699,GO:0052706;gbkey=CDS;gene=egtD;go_function=L-histidine N(alpha)-methyltransferase activity|0052706||IEA;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412578.1;locus_tag=LDO38_RS02095;product=L-histidine N(alpha)-methyltransferase;protein_id=WP_034193015.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 28404 29633 . - . ID=gene-LDO38_RS02100;Name=egtB;gbkey=Gene;gene=egtB;gene_biotype=protein_coding;locus_tag=LDO38_RS02100;old_locus_tag=BVI2075_1100030 NZ_CAJZAL010000014.1 Protein Homology CDS 28404 29633 . - 0 ID=cds-WP_034193016.1;Parent=gene-LDO38_RS02100;Dbxref=GenBank:WP_034193016.1;Name=WP_034193016.1;Ontology_term=GO:0052699;gbkey=CDS;gene=egtB;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327561.1;locus_tag=LDO38_RS02100;product=ergothioneine biosynthesis protein EgtB;protein_id=WP_034193016.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 30188 30664 . + . ID=gene-LDO38_RS02105;Name=LDO38_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02105;old_locus_tag=BVI2075_1100031 NZ_CAJZAL010000014.1 Protein Homology CDS 30188 30664 . + 0 ID=cds-WP_011882736.1;Parent=gene-LDO38_RS02105;Dbxref=GenBank:WP_011882736.1;Name=WP_011882736.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477215.1;locus_tag=LDO38_RS02105;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_011882736.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 30664 31533 . + . ID=gene-LDO38_RS02110;Name=LDO38_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02110;old_locus_tag=BVI2075_1100032 NZ_CAJZAL010000014.1 Protein Homology CDS 30664 31533 . + 0 ID=cds-WP_011882735.1;Parent=gene-LDO38_RS02110;Dbxref=GenBank:WP_011882735.1;Name=WP_011882735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412577.1;locus_tag=LDO38_RS02110;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_011882735.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 31701 31777 . - . ID=gene-LDO38_RS02115;Name=LDO38_RS02115;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS02115;old_locus_tag=BVI2075_TRNA31 NZ_CAJZAL010000014.1 tRNAscan-SE tRNA 31701 31777 . - . ID=rna-LDO38_RS02115;Parent=gene-LDO38_RS02115;anticodon=(pos:complement(31741..31743));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS02115;product=tRNA-Val NZ_CAJZAL010000014.1 tRNAscan-SE exon 31701 31777 . - . ID=exon-LDO38_RS02115-1;Parent=rna-LDO38_RS02115;anticodon=(pos:complement(31741..31743));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS02115;product=tRNA-Val NZ_CAJZAL010000014.1 RefSeq gene 32653 33723 . + . ID=gene-LDO38_RS02120;Name=LDO38_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02120;old_locus_tag=BVI2075_1100035 NZ_CAJZAL010000014.1 Protein Homology CDS 32653 33723 . + 0 ID=cds-WP_069246093.1;Parent=gene-LDO38_RS02120;Dbxref=GenBank:WP_069246093.1;Name=WP_069246093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407267.1;locus_tag=LDO38_RS02120;product=Imm72 family immunity protein;protein_id=WP_069246093.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 34220 34981 . - . ID=gene-LDO38_RS02125;Name=LDO38_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02125;old_locus_tag=BVI2075_1100036 NZ_CAJZAL010000014.1 Protein Homology CDS 34220 34981 . - 0 ID=cds-WP_069246092.1;Parent=gene-LDO38_RS02125;Dbxref=GenBank:WP_069246092.1;Name=WP_069246092.1;Ontology_term=GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882732.1;locus_tag=LDO38_RS02125;product=anti-sigma factor family protein;protein_id=WP_069246092.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 34978 35496 . - . ID=gene-LDO38_RS02130;Name=LDO38_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02130;old_locus_tag=BVI2075_1100037 NZ_CAJZAL010000014.1 Protein Homology CDS 34978 35496 . - 0 ID=cds-WP_011882731.1;Parent=gene-LDO38_RS02130;Dbxref=GenBank:WP_011882731.1;Name=WP_011882731.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011401646.1;locus_tag=LDO38_RS02130;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_011882731.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 35653 36741 . + . ID=gene-LDO38_RS02135;Name=LDO38_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02135;old_locus_tag=BVI2075_1100039 NZ_CAJZAL010000014.1 Protein Homology CDS 35653 36741 . + 0 ID=cds-WP_011882730.1;Parent=gene-LDO38_RS02135;Dbxref=GenBank:WP_011882730.1;Name=WP_011882730.1;Ontology_term=GO:0042542,GO:0004601,GO:0005506,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,iron ion binding|0005506||IEA,heme binding|0020037||IEA;go_process=response to hydrogen peroxide|0042542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750391.1;locus_tag=LDO38_RS02135;product=catalase family peroxidase;protein_id=WP_011882730.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 36738 37271 . + . ID=gene-LDO38_RS02140;Name=LDO38_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02140;old_locus_tag=BVI2075_1100040 NZ_CAJZAL010000014.1 Protein Homology CDS 36738 37271 . + 0 ID=cds-WP_059550680.1;Parent=gene-LDO38_RS02140;Dbxref=GenBank:WP_059550680.1;Name=WP_059550680.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487164.1;locus_tag=LDO38_RS02140;product=cytochrome b;protein_id=WP_059550680.1;transl_table=11 NZ_CAJZAL010000014.1 RefSeq gene 37315 37508 . - . ID=gene-LDO38_RS02145;Name=LDO38_RS02145;end_range=37508,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02145;partial=true NZ_CAJZAL010000014.1 GeneMarkS-2+ CDS 37315 37508 . - 2 ID=cds-WP_224056160.1;Parent=gene-LDO38_RS02145;Dbxref=GenBank:WP_224056160.1;Name=WP_224056160.1;end_range=37508,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS02145;partial=true;product=hypothetical protein;protein_id=WP_224056160.1;transl_table=11 ##sequence-region NZ_CAJZAL010000015.1 1 3682 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000015.1 RefSeq region 1 3682 . + . ID=NZ_CAJZAL010000015.1:1..3682;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_111 NZ_CAJZAL010000015.1 RefSeq gene 1 838 . - . ID=gene-LDO38_RS02150;Name=LDO38_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02150;partial=true;start_range=.,1 NZ_CAJZAL010000015.1 Protein Homology CDS 1 838 . - 0 ID=cds-WP_224056161.1;Parent=gene-LDO38_RS02150;Dbxref=GenBank:WP_224056161.1;Name=WP_224056161.1;Ontology_term=GO:0005975,GO:0016787,GO:0097367;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024455.1;locus_tag=LDO38_RS02150;partial=true;product=SIS domain-containing protein;protein_id=WP_224056161.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000015.1 RefSeq gene 831 1934 . - . ID=gene-LDO38_RS02155;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=LDO38_RS02155;old_locus_tag=BVI2075_1110002 NZ_CAJZAL010000015.1 Protein Homology CDS 831 1934 . - 0 ID=cds-WP_011886086.1;Parent=gene-LDO38_RS02155;Dbxref=GenBank:WP_011886086.1;Name=WP_011886086.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008921875.1;locus_tag=LDO38_RS02155;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_011886086.1;transl_table=11 NZ_CAJZAL010000015.1 RefSeq gene 2069 2803 . - . ID=gene-LDO38_RS02160;Name=LDO38_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02160;old_locus_tag=BVI2075_1110003 NZ_CAJZAL010000015.1 Protein Homology CDS 2069 2803 . - 0 ID=cds-WP_011886087.1;Parent=gene-LDO38_RS02160;Dbxref=GenBank:WP_011886087.1;Name=WP_011886087.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334292.1;locus_tag=LDO38_RS02160;product=GntR family transcriptional regulator;protein_id=WP_011886087.1;transl_table=11 NZ_CAJZAL010000015.1 RefSeq pseudogene 3191 3682 . - . ID=gene-LDO38_RS02165;Name=LDO38_RS02165;end_range=3682,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS02165;old_locus_tag=BVI2075_1110004;partial=true;pseudo=true NZ_CAJZAL010000015.1 Protein Homology CDS 3191 3682 . - 0 ID=cds-LDO38_RS02165;Parent=gene-LDO38_RS02165;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3682,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004541116.1;locus_tag=LDO38_RS02165;partial=true;product=error-prone DNA polymerase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000016.1 1 2245 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000016.1 RefSeq region 1 2245 . + . ID=NZ_CAJZAL010000016.1:1..2245;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_112 NZ_CAJZAL010000016.1 RefSeq gene 20 424 . + . ID=gene-LDO38_RS02170;Name=LDO38_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02170;old_locus_tag=BVI2075_1120001 NZ_CAJZAL010000016.1 Protein Homology CDS 20 424 . + 0 ID=cds-WP_224056162.1;Parent=gene-LDO38_RS02170;Dbxref=GenBank:WP_224056162.1;Name=WP_224056162.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.6;locus_tag=LDO38_RS02170;product=LysR substrate-binding domain-containing protein;protein_id=WP_224056162.1;transl_table=11 NZ_CAJZAL010000016.1 RefSeq gene 571 912 . + . ID=gene-LDO38_RS02175;Name=LDO38_RS02175;end_range=912,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02175;old_locus_tag=BVI2075_1120002;partial=true NZ_CAJZAL010000016.1 Protein Homology CDS 571 912 . + 0 ID=cds-WP_253074550.1;Parent=gene-LDO38_RS02175;Dbxref=GenBank:WP_253074550.1;Name=WP_253074550.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;end_range=912,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198340.1;locus_tag=LDO38_RS02175;partial=true;product=LysR family transcriptional regulator;protein_id=WP_253074550.1;transl_table=11 NZ_CAJZAL010000016.1 RefSeq pseudogene 1059 2145 . - . ID=gene-LDO38_RS02180;Name=LDO38_RS02180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS02180;old_locus_tag=BVI2075_1120004;pseudo=true NZ_CAJZAL010000016.1 Protein Homology CDS 1059 2145 . - 0 ID=cds-LDO38_RS02180;Parent=gene-LDO38_RS02180;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725164.1;locus_tag=LDO38_RS02180;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000017.1 1 13845 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000017.1 RefSeq region 1 13845 . + . ID=NZ_CAJZAL010000017.1:1..13845;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_113 NZ_CAJZAL010000017.1 RefSeq gene 83 580 . - . ID=gene-LDO38_RS02185;Name=LDO38_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02185;old_locus_tag=BVI2075_1130001 NZ_CAJZAL010000017.1 Protein Homology CDS 83 580 . - 0 ID=cds-WP_059475296.1;Parent=gene-LDO38_RS02185;Dbxref=GenBank:WP_059475296.1;Name=WP_059475296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759782.1;locus_tag=LDO38_RS02185;product=YybH family protein;protein_id=WP_059475296.1;transl_table=11 NZ_CAJZAL010000017.1 RefSeq gene 708 1562 . - . ID=gene-LDO38_RS02190;Name=LDO38_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02190;old_locus_tag=BVI2075_1130002 NZ_CAJZAL010000017.1 Protein Homology CDS 708 1562 . - 0 ID=cds-WP_011880967.1;Parent=gene-LDO38_RS02190;Dbxref=GenBank:WP_011880967.1;Name=WP_011880967.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479661.1;locus_tag=LDO38_RS02190;product=DJ-1/PfpI family protein;protein_id=WP_011880967.1;transl_table=11 NZ_CAJZAL010000017.1 RefSeq gene 1714 2460 . - . ID=gene-LDO38_RS02195;Name=LDO38_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02195;old_locus_tag=BVI2075_1130003 NZ_CAJZAL010000017.1 Protein Homology CDS 1714 2460 . - 0 ID=cds-WP_014724123.1;Parent=gene-LDO38_RS02195;Dbxref=GenBank:WP_014724123.1;Name=WP_014724123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759784.1;locus_tag=LDO38_RS02195;product=SDR family oxidoreductase;protein_id=WP_014724123.1;transl_table=11 NZ_CAJZAL010000017.1 RefSeq gene 2899 3819 . + . ID=gene-LDO38_RS02200;Name=LDO38_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02200;old_locus_tag=BVI2075_1130004 NZ_CAJZAL010000017.1 Protein Homology CDS 2899 3819 . + 0 ID=cds-WP_011880969.1;Parent=gene-LDO38_RS02200;Dbxref=GenBank:WP_011880969.1;Name=WP_011880969.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090095.1;locus_tag=LDO38_RS02200;product=LysR family transcriptional regulator;protein_id=WP_011880969.1;transl_table=11 NZ_CAJZAL010000017.1 RefSeq gene 4046 4828 . + . ID=gene-LDO38_RS02205;Name=LDO38_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02205;old_locus_tag=BVI2075_1130006 NZ_CAJZAL010000017.1 Protein Homology CDS 4046 4828 . + 0 ID=cds-WP_011880970.1;Parent=gene-LDO38_RS02205;Dbxref=GenBank:WP_011880970.1;Name=WP_011880970.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090096.1;locus_tag=LDO38_RS02205;product=ABC transporter substrate-binding protein;protein_id=WP_011880970.1;transl_table=11 NZ_CAJZAL010000017.1 RefSeq gene 5085 6200 . + . ID=gene-LDO38_RS02210;Name=LDO38_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02210;old_locus_tag=BVI2075_1130007 NZ_CAJZAL010000017.1 Protein Homology CDS 5085 6200 . + 0 ID=cds-WP_011880971.1;Parent=gene-LDO38_RS02210;Dbxref=GenBank:WP_011880971.1;Name=WP_011880971.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331142.1;locus_tag=LDO38_RS02210;product=succinylglutamate desuccinylase/aspartoacylase family protein;protein_id=WP_011880971.1;transl_table=11 NZ_CAJZAL010000017.1 RefSeq gene 6338 7144 . - . ID=gene-LDO38_RS02215;Name=LDO38_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02215;old_locus_tag=BVI2075_1130008 NZ_CAJZAL010000017.1 Protein Homology CDS 6338 7144 . - 0 ID=cds-WP_034193379.1;Parent=gene-LDO38_RS02215;Dbxref=GenBank:WP_034193379.1;Name=WP_034193379.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353840.1;locus_tag=LDO38_RS02215;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_034193379.1;transl_table=11 NZ_CAJZAL010000017.1 RefSeq gene 7447 8604 . + . ID=gene-LDO38_RS02220;Name=LDO38_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02220;old_locus_tag=BVI2075_1130010 NZ_CAJZAL010000017.1 Protein Homology CDS 7447 8604 . + 0 ID=cds-WP_011880973.1;Parent=gene-LDO38_RS02220;Dbxref=GenBank:WP_011880973.1;Name=WP_011880973.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900901.1;locus_tag=LDO38_RS02220;product=porin;protein_id=WP_011880973.1;transl_table=11 NZ_CAJZAL010000017.1 RefSeq gene 8824 9084 . + . ID=gene-LDO38_RS02225;Name=LDO38_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02225;old_locus_tag=BVI2075_1130011 NZ_CAJZAL010000017.1 Protein Homology CDS 8824 9084 . + 0 ID=cds-WP_011880974.1;Parent=gene-LDO38_RS02225;Dbxref=GenBank:WP_011880974.1;Name=WP_011880974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353838.1;locus_tag=LDO38_RS02225;product=DUF2866 domain-containing protein;protein_id=WP_011880974.1;transl_table=11 NZ_CAJZAL010000017.1 RefSeq gene 9194 9577 . + . ID=gene-LDO38_RS02230;Name=LDO38_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02230;old_locus_tag=BVI2075_1130012 NZ_CAJZAL010000017.1 Protein Homology CDS 9194 9577 . + 0 ID=cds-WP_011880975.1;Parent=gene-LDO38_RS02230;Dbxref=GenBank:WP_011880975.1;Name=WP_011880975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754284.1;locus_tag=LDO38_RS02230;product=DUF6232 family protein;protein_id=WP_011880975.1;transl_table=11 NZ_CAJZAL010000017.1 RefSeq gene 9649 9876 . + . ID=gene-LDO38_RS02235;Name=LDO38_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02235;old_locus_tag=BVI2075_1130013 NZ_CAJZAL010000017.1 Protein Homology CDS 9649 9876 . + 0 ID=cds-WP_011880976.1;Parent=gene-LDO38_RS02235;Dbxref=GenBank:WP_011880976.1;Name=WP_011880976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339294.1;locus_tag=LDO38_RS02235;product=hypothetical protein;protein_id=WP_011880976.1;transl_table=11 NZ_CAJZAL010000017.1 RefSeq gene 10369 10980 . - . ID=gene-LDO38_RS02240;Name=LDO38_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02240;old_locus_tag=BVI2075_1130014 NZ_CAJZAL010000017.1 Protein Homology CDS 10369 10980 . - 0 ID=cds-WP_059583114.1;Parent=gene-LDO38_RS02240;Dbxref=GenBank:WP_059583114.1;Name=WP_059583114.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094611.1;locus_tag=LDO38_RS02240;product=trimeric intracellular cation channel family protein;protein_id=WP_059583114.1;transl_table=11 NZ_CAJZAL010000017.1 RefSeq gene 10991 11203 . - . ID=gene-LDO38_RS02245;Name=LDO38_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02245 NZ_CAJZAL010000017.1 GeneMarkS-2+ CDS 10991 11203 . - 0 ID=cds-WP_224020231.1;Parent=gene-LDO38_RS02245;Dbxref=GenBank:WP_224020231.1;Name=WP_224020231.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS02245;product=hypothetical protein;protein_id=WP_224020231.1;transl_table=11 NZ_CAJZAL010000017.1 RefSeq gene 11581 12384 . + . ID=gene-LDO38_RS02250;Name=LDO38_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02250;old_locus_tag=BVI2075_1130016 NZ_CAJZAL010000017.1 Protein Homology CDS 11581 12384 . + 0 ID=cds-WP_059623687.1;Parent=gene-LDO38_RS02250;Dbxref=GenBank:WP_059623687.1;Name=WP_059623687.1;Ontology_term=GO:0016310,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496213.1;locus_tag=LDO38_RS02250;product=aminoglycoside phosphotransferase family protein;protein_id=WP_059623687.1;transl_table=11 NZ_CAJZAL010000017.1 RefSeq gene 12463 13299 . - . ID=gene-LDO38_RS02255;Name=LDO38_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02255;old_locus_tag=BVI2075_1130017 NZ_CAJZAL010000017.1 Protein Homology CDS 12463 13299 . - 0 ID=cds-WP_011880980.1;Parent=gene-LDO38_RS02255;Dbxref=GenBank:WP_011880980.1;Name=WP_011880980.1;Ontology_term=GO:0010136,GO:0004037,GO:0071522;gbkey=CDS;go_function=allantoicase activity|0004037||IEA,ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880980.1;locus_tag=LDO38_RS02255;product=bifunctional allantoicase/(S)-ureidoglycine aminohydrolase;protein_id=WP_011880980.1;transl_table=11 NZ_CAJZAL010000017.1 RefSeq gene 13656 13845 . - . ID=gene-LDO38_RS02260;Name=LDO38_RS02260;end_range=13845,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02260;partial=true NZ_CAJZAL010000017.1 GeneMarkS-2+ CDS 13656 13845 . - 1 ID=cds-WP_224056164.1;Parent=gene-LDO38_RS02260;Dbxref=GenBank:WP_224056164.1;Name=WP_224056164.1;end_range=13845,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS02260;partial=true;product=hypothetical protein;protein_id=WP_224056164.1;transl_table=11 ##sequence-region NZ_CAJZAL010000018.1 1 2913 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000018.1 RefSeq region 1 2913 . + . ID=NZ_CAJZAL010000018.1:1..2913;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_114 NZ_CAJZAL010000018.1 RefSeq pseudogene 1 353 . + . ID=gene-LDO38_RS02265;Name=LDO38_RS02265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS02265;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000018.1 Protein Homology CDS 1 353 . + 2 ID=cds-LDO38_RS02265;Parent=gene-LDO38_RS02265;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723686.1;locus_tag=LDO38_RS02265;partial=true;product=DNA polymerase Y family protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000018.1 RefSeq gene 360 2913 . + . ID=gene-LDO38_RS02270;Name=LDO38_RS02270;end_range=2913,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02270;partial=true NZ_CAJZAL010000018.1 Protein Homology CDS 360 2913 . + 0 ID=cds-WP_224056165.1;Parent=gene-LDO38_RS02270;Dbxref=GenBank:WP_224056165.1;Name=WP_224056165.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;end_range=2913,.;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895981.1;locus_tag=LDO38_RS02270;partial=true;product=error-prone DNA polymerase;protein_id=WP_224056165.1;transl_table=11 ##sequence-region NZ_CAJZAL010000019.1 1 9612 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000019.1 RefSeq region 1 9612 . + . ID=NZ_CAJZAL010000019.1:1..9612;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_115 NZ_CAJZAL010000019.1 RefSeq gene 1 221 . - . ID=gene-LDO38_RS02275;Name=LDO38_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02275;partial=true;start_range=.,1 NZ_CAJZAL010000019.1 Protein Homology CDS 1 221 . - 0 ID=cds-WP_224056166.1;Parent=gene-LDO38_RS02275;Dbxref=GenBank:WP_224056166.1;Name=WP_224056166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755900.1;locus_tag=LDO38_RS02275;partial=true;product=DUF2917 domain-containing protein;protein_id=WP_224056166.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000019.1 RefSeq gene 433 1872 . + . ID=gene-LDO38_RS02280;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=LDO38_RS02280;old_locus_tag=BVI2075_1150002 NZ_CAJZAL010000019.1 Protein Homology CDS 433 1872 . + 0 ID=cds-WP_011885793.1;Parent=gene-LDO38_RS02280;Dbxref=GenBank:WP_011885793.1;Name=WP_011885793.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329084.1;locus_tag=LDO38_RS02280;product=multidrug transporter subunit MdtD;protein_id=WP_011885793.1;transl_table=11 NZ_CAJZAL010000019.1 RefSeq gene 2095 3369 . + . ID=gene-LDO38_RS02285;Name=LDO38_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02285;old_locus_tag=BVI2075_1150003 NZ_CAJZAL010000019.1 Protein Homology CDS 2095 3369 . + 0 ID=cds-WP_011885794.1;Parent=gene-LDO38_RS02285;Dbxref=GenBank:WP_011885794.1;Name=WP_011885794.1;Ontology_term=GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885794.1;locus_tag=LDO38_RS02285;product=EAL domain-containing protein;protein_id=WP_011885794.1;transl_table=11 NZ_CAJZAL010000019.1 RefSeq gene 3385 3987 . - . ID=gene-LDO38_RS02290;Name=LDO38_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02290;old_locus_tag=BVI2075_1150004 NZ_CAJZAL010000019.1 Protein Homology CDS 3385 3987 . - 0 ID=cds-WP_014723509.1;Parent=gene-LDO38_RS02290;Dbxref=GenBank:WP_014723509.1;Name=WP_014723509.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723509.1;locus_tag=LDO38_RS02290;product=class I SAM-dependent methyltransferase;protein_id=WP_014723509.1;transl_table=11 NZ_CAJZAL010000019.1 RefSeq gene 4122 4646 . - . ID=gene-LDO38_RS02295;Name=LDO38_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02295;old_locus_tag=BVI2075_1150005 NZ_CAJZAL010000019.1 Protein Homology CDS 4122 4646 . - 0 ID=cds-WP_069264665.1;Parent=gene-LDO38_RS02295;Dbxref=GenBank:WP_069264665.1;Name=WP_069264665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496466.1;locus_tag=LDO38_RS02295;product=DUF962 domain-containing protein;protein_id=WP_069264665.1;transl_table=11 NZ_CAJZAL010000019.1 RefSeq gene 4728 5435 . + . ID=gene-LDO38_RS02300;Name=LDO38_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02300;old_locus_tag=BVI2075_1150006 NZ_CAJZAL010000019.1 Protein Homology CDS 4728 5435 . + 0 ID=cds-WP_011885797.1;Parent=gene-LDO38_RS02300;Dbxref=GenBank:WP_011885797.1;Name=WP_011885797.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885797.1;locus_tag=LDO38_RS02300;product=Crp/Fnr family transcriptional regulator;protein_id=WP_011885797.1;transl_table=11 NZ_CAJZAL010000019.1 RefSeq gene 5562 6779 . + . ID=gene-LDO38_RS02305;Name=chrA;gbkey=Gene;gene=chrA;gene_biotype=protein_coding;locus_tag=LDO38_RS02305;old_locus_tag=BVI2075_1150007 NZ_CAJZAL010000019.1 Protein Homology CDS 5562 6779 . + 0 ID=cds-WP_212159246.1;Parent=gene-LDO38_RS02305;Dbxref=GenBank:WP_212159246.1;Name=WP_212159246.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;gene=chrA;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885798.1;locus_tag=LDO38_RS02305;product=chromate efflux transporter;protein_id=WP_212159246.1;transl_table=11 NZ_CAJZAL010000019.1 RefSeq gene 6898 7476 . - . ID=gene-LDO38_RS02310;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=LDO38_RS02310;old_locus_tag=BVI2075_1150008 NZ_CAJZAL010000019.1 Protein Homology CDS 6898 7476 . - 0 ID=cds-WP_014723511.1;Parent=gene-LDO38_RS02310;Dbxref=GenBank:WP_014723511.1;Name=WP_014723511.1;gbkey=CDS;gene=sodB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024786.1;locus_tag=LDO38_RS02310;product=superoxide dismutase [Fe];protein_id=WP_014723511.1;transl_table=11 NZ_CAJZAL010000019.1 RefSeq gene 7716 9098 . - . ID=gene-LDO38_RS02315;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=LDO38_RS02315;old_locus_tag=BVI2075_1150010 NZ_CAJZAL010000019.1 Protein Homology CDS 7716 9098 . - 0 ID=cds-WP_059561859.1;Parent=gene-LDO38_RS02315;Dbxref=GenBank:WP_059561859.1;Name=WP_059561859.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329091.1;locus_tag=LDO38_RS02315;product=exodeoxyribonuclease VII large subunit;protein_id=WP_059561859.1;transl_table=11 ##sequence-region NZ_CAJZAL010000020.1 1 10200 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000020.1 RefSeq region 1 10200 . + . ID=NZ_CAJZAL010000020.1:1..10200;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_116 NZ_CAJZAL010000020.1 RefSeq gene 213 1106 . - . ID=gene-LDO38_RS02320;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=LDO38_RS02320;old_locus_tag=BVI2075_1160001 NZ_CAJZAL010000020.1 Protein Homology CDS 213 1106 . - 0 ID=cds-WP_011886190.1;Parent=gene-LDO38_RS02320;Dbxref=GenBank:WP_011886190.1;Name=WP_011886190.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886190.1;locus_tag=LDO38_RS02320;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_011886190.1;transl_table=11 NZ_CAJZAL010000020.1 RefSeq gene 1557 2576 . + . ID=gene-LDO38_RS02325;Name=LDO38_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02325;old_locus_tag=BVI2075_1160002 NZ_CAJZAL010000020.1 Protein Homology CDS 1557 2576 . + 0 ID=cds-WP_011886189.1;Parent=gene-LDO38_RS02325;Dbxref=GenBank:WP_011886189.1;Name=WP_011886189.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760583.1;locus_tag=LDO38_RS02325;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_011886189.1;transl_table=11 NZ_CAJZAL010000020.1 RefSeq gene 2774 3742 . + . ID=gene-LDO38_RS02330;Name=LDO38_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02330;old_locus_tag=BVI2075_1160003 NZ_CAJZAL010000020.1 Protein Homology CDS 2774 3742 . + 0 ID=cds-WP_011886188.1;Parent=gene-LDO38_RS02330;Dbxref=GenBank:WP_011886188.1;Name=WP_011886188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760584.1;locus_tag=LDO38_RS02330;product=ion channel;protein_id=WP_011886188.1;transl_table=11 NZ_CAJZAL010000020.1 RefSeq gene 3806 4363 . + . ID=gene-LDO38_RS02335;Name=LDO38_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02335;old_locus_tag=BVI2075_1160004 NZ_CAJZAL010000020.1 Protein Homology CDS 3806 4363 . + 0 ID=cds-WP_011886187.1;Parent=gene-LDO38_RS02335;Dbxref=GenBank:WP_011886187.1;Name=WP_011886187.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895873.1;locus_tag=LDO38_RS02335;product=sugar O-acetyltransferase;protein_id=WP_011886187.1;transl_table=11 NZ_CAJZAL010000020.1 RefSeq gene 6195 9800 . + . ID=gene-LDO38_RS02340;Name=LDO38_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02340;old_locus_tag=BVI2075_1160009 NZ_CAJZAL010000020.1 Protein Homology CDS 6195 9800 . + 0 ID=cds-WP_212167733.1;Parent=gene-LDO38_RS02340;Dbxref=GenBank:WP_212167733.1;Name=WP_212167733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353392.1;locus_tag=LDO38_RS02340;product=indolepyruvate ferredoxin oxidoreductase family protein;protein_id=WP_212167733.1;transl_table=11 NZ_CAJZAL010000020.1 RefSeq pseudogene 9891 10200 . - . ID=gene-LDO38_RS02345;Name=LDO38_RS02345;end_range=10200,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS02345;old_locus_tag=BVI2075_1160010;partial=true;pseudo=true NZ_CAJZAL010000020.1 Protein Homology CDS 9891 10200 . - 1 ID=cds-LDO38_RS02345;Parent=gene-LDO38_RS02345;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=10200,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414312.1;locus_tag=LDO38_RS02345;partial=true;product=Na+/H+ antiporter;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000021.1 1 5183 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000021.1 RefSeq region 1 5183 . + . ID=NZ_CAJZAL010000021.1:1..5183;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_117 NZ_CAJZAL010000021.1 RefSeq gene 1 1402 . + . ID=gene-LDO38_RS02350;Name=LDO38_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02350;old_locus_tag=BVI2075_1170001;partial=true;start_range=.,1 NZ_CAJZAL010000021.1 Protein Homology CDS 1 1402 . + 1 ID=cds-WP_224056167.1;Parent=gene-LDO38_RS02350;Dbxref=GenBank:WP_224056167.1;Name=WP_224056167.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006499030.1;locus_tag=LDO38_RS02350;partial=true;product=family 20 glycosylhydrolase;protein_id=WP_224056167.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000021.1 RefSeq gene 1586 3361 . - . ID=gene-LDO38_RS02355;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=LDO38_RS02355;old_locus_tag=BVI2075_1170002 NZ_CAJZAL010000021.1 Protein Homology CDS 1586 3361 . - 0 ID=cds-WP_045578764.1;Parent=gene-LDO38_RS02355;Dbxref=GenBank:WP_045578764.1;Name=WP_045578764.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212677.1;locus_tag=LDO38_RS02355;product=N-acetylglucosamine-specific PTS transporter subunit IIBC;protein_id=WP_045578764.1;transl_table=11 NZ_CAJZAL010000021.1 RefSeq gene 3450 5183 . - . ID=gene-LDO38_RS02360;Name=ptsP;end_range=5183,.;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=LDO38_RS02360;old_locus_tag=BVI2075_1170003;partial=true NZ_CAJZAL010000021.1 Protein Homology CDS 3450 5183 . - 0 ID=cds-WP_224056168.1;Parent=gene-LDO38_RS02360;Dbxref=GenBank:WP_224056168.1;Name=WP_224056168.1;Ontology_term=GO:0009401,GO:0008965;end_range=5183,.;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886084.1;locus_tag=LDO38_RS02360;partial=true;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_224056168.1;transl_table=11 ##sequence-region NZ_CAJZAL010000022.1 1 25747 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000022.1 RefSeq region 1 25747 . + . ID=NZ_CAJZAL010000022.1:1..25747;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_118 NZ_CAJZAL010000022.1 RefSeq gene 1 939 . + . ID=gene-LDO38_RS02365;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=LDO38_RS02365;old_locus_tag=BVI2075_1180001;partial=true;start_range=.,1 NZ_CAJZAL010000022.1 Protein Homology CDS 1 939 . + 0 ID=cds-WP_224056169.1;Parent=gene-LDO38_RS02365;Dbxref=GenBank:WP_224056169.1;Name=WP_224056169.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492304.1;locus_tag=LDO38_RS02365;partial=true;product=thiamine phosphate synthase;protein_id=WP_224056169.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 1024 1845 . + . ID=gene-LDO38_RS02370;Name=LDO38_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02370;old_locus_tag=BVI2075_1180002 NZ_CAJZAL010000022.1 Protein Homology CDS 1024 1845 . + 0 ID=cds-WP_011883043.1;Parent=gene-LDO38_RS02370;Dbxref=GenBank:WP_011883043.1;Name=WP_011883043.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333587.1;locus_tag=LDO38_RS02370;product=ABC transporter ATP-binding protein;protein_id=WP_011883043.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 1842 2609 . + . ID=gene-LDO38_RS02375;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=LDO38_RS02375;old_locus_tag=BVI2075_1180003 NZ_CAJZAL010000022.1 Protein Homology CDS 1842 2609 . + 0 ID=cds-WP_011883044.1;Parent=gene-LDO38_RS02375;Dbxref=GenBank:WP_011883044.1;Name=WP_011883044.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734415.1;locus_tag=LDO38_RS02375;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_011883044.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 2634 3200 . + . ID=gene-LDO38_RS02380;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=LDO38_RS02380;old_locus_tag=BVI2075_1180004 NZ_CAJZAL010000022.1 Protein Homology CDS 2634 3200 . + 0 ID=cds-WP_034193998.1;Parent=gene-LDO38_RS02380;Dbxref=GenBank:WP_034193998.1;Name=WP_034193998.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400593.1;locus_tag=LDO38_RS02380;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_034193998.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 3233 4141 . + . ID=gene-LDO38_RS02385;Name=LDO38_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02385;old_locus_tag=BVI2075_1180005 NZ_CAJZAL010000022.1 Protein Homology CDS 3233 4141 . + 0 ID=cds-WP_181709244.1;Parent=gene-LDO38_RS02385;Dbxref=GenBank:WP_181709244.1;Name=WP_181709244.1;Ontology_term=GO:0120010,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=intermembrane phospholipid transfer|0120010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883046.1;locus_tag=LDO38_RS02385;product=MlaA family lipoprotein;protein_id=WP_181709244.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 4266 4895 . + . ID=gene-LDO38_RS02390;Name=LDO38_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02390;old_locus_tag=BVI2075_1180007 NZ_CAJZAL010000022.1 Protein Homology CDS 4266 4895 . + 0 ID=cds-WP_011883047.1;Parent=gene-LDO38_RS02390;Dbxref=GenBank:WP_011883047.1;Name=WP_011883047.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106880.1;locus_tag=LDO38_RS02390;product=MlaC/ttg2D family ABC transporter substrate-binding protein;protein_id=WP_011883047.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 4892 5167 . + . ID=gene-LDO38_RS02395;Name=LDO38_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02395;old_locus_tag=BVI2075_1180008 NZ_CAJZAL010000022.1 Protein Homology CDS 4892 5167 . + 0 ID=cds-WP_034193997.1;Parent=gene-LDO38_RS02395;Dbxref=GenBank:WP_034193997.1;Name=WP_034193997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546610.1;locus_tag=LDO38_RS02395;product=STAS domain-containing protein;protein_id=WP_034193997.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 5359 6285 . + . ID=gene-LDO38_RS02400;Name=LDO38_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02400;old_locus_tag=BVI2075_1180009 NZ_CAJZAL010000022.1 Protein Homology CDS 5359 6285 . + 0 ID=cds-WP_011883049.1;Parent=gene-LDO38_RS02400;Dbxref=GenBank:WP_011883049.1;Name=WP_011883049.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554063.1;locus_tag=LDO38_RS02400;product=ABC transporter ATP-binding protein;protein_id=WP_011883049.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 6282 7037 . + . ID=gene-LDO38_RS02405;Name=LDO38_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02405;old_locus_tag=BVI2075_1180010 NZ_CAJZAL010000022.1 Protein Homology CDS 6282 7037 . + 0 ID=cds-WP_011883050.1;Parent=gene-LDO38_RS02405;Dbxref=GenBank:WP_011883050.1;Name=WP_011883050.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696427.1;locus_tag=LDO38_RS02405;product=ABC transporter permease;protein_id=WP_011883050.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 7089 7328 . + . ID=gene-LDO38_RS02410;Name=LDO38_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02410;old_locus_tag=BVI2075_1180011 NZ_CAJZAL010000022.1 Protein Homology CDS 7089 7328 . + 0 ID=cds-WP_006477131.1;Parent=gene-LDO38_RS02410;Dbxref=GenBank:WP_006477131.1;Name=WP_006477131.1;Ontology_term=GO:0051604,GO:0051536,GO:1990229;gbkey=CDS;go_component=iron-sulfur cluster assembly complex|1990229||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029348.1;locus_tag=LDO38_RS02410;product=BolA family protein;protein_id=WP_006477131.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 7342 8691 . + . ID=gene-LDO38_RS02415;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=LDO38_RS02415;old_locus_tag=BVI2075_1180012 NZ_CAJZAL010000022.1 Protein Homology CDS 7342 8691 . + 0 ID=cds-WP_224056170.1;Parent=gene-LDO38_RS02415;Dbxref=GenBank:WP_224056170.1;Name=WP_224056170.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041492724.1;locus_tag=LDO38_RS02415;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_224056170.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 8688 9341 . + . ID=gene-LDO38_RS02420;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=LDO38_RS02420;old_locus_tag=BVI2075_1180013 NZ_CAJZAL010000022.1 Protein Homology CDS 8688 9341 . + 0 ID=cds-WP_011883052.1;Parent=gene-LDO38_RS02420;Dbxref=GenBank:WP_011883052.1;Name=WP_011883052.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751807.1;locus_tag=LDO38_RS02420;product=ATP phosphoribosyltransferase;protein_id=WP_011883052.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 9366 10682 . + . ID=gene-LDO38_RS02425;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=LDO38_RS02425;old_locus_tag=BVI2075_1180014 NZ_CAJZAL010000022.1 Protein Homology CDS 9366 10682 . + 0 ID=cds-WP_011883053.1;Parent=gene-LDO38_RS02425;Dbxref=GenBank:WP_011883053.1;Name=WP_011883053.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327781.1;locus_tag=LDO38_RS02425;product=histidinol dehydrogenase;protein_id=WP_011883053.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 10802 11875 . + . ID=gene-LDO38_RS02430;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=LDO38_RS02430;old_locus_tag=BVI2075_1180016 NZ_CAJZAL010000022.1 Protein Homology CDS 10802 11875 . + 0 ID=cds-WP_011883054.1;Parent=gene-LDO38_RS02430;Dbxref=GenBank:WP_011883054.1;Name=WP_011883054.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751805.1;locus_tag=LDO38_RS02430;product=histidinol-phosphate transaminase;protein_id=WP_011883054.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 11938 12525 . + . ID=gene-LDO38_RS02435;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=LDO38_RS02435;old_locus_tag=BVI2075_1180017 NZ_CAJZAL010000022.1 Protein Homology CDS 11938 12525 . + 0 ID=cds-WP_006765368.1;Parent=gene-LDO38_RS02435;Dbxref=GenBank:WP_006765368.1;Name=WP_006765368.1;Ontology_term=GO:0000105,GO:0004424;gbkey=CDS;gene=hisB;go_function=imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400582.1;locus_tag=LDO38_RS02435;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_006765368.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 12588 13208 . + . ID=gene-LDO38_RS02440;Name=LDO38_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02440;old_locus_tag=BVI2075_1180018 NZ_CAJZAL010000022.1 Protein Homology CDS 12588 13208 . + 0 ID=cds-WP_011883055.1;Parent=gene-LDO38_RS02440;Dbxref=GenBank:WP_011883055.1;Name=WP_011883055.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092886.1;locus_tag=LDO38_RS02440;product=YchE family NAAT transporter;protein_id=WP_011883055.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 13205 13846 . + . ID=gene-LDO38_RS02445;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=LDO38_RS02445;old_locus_tag=BVI2075_1180019 NZ_CAJZAL010000022.1 Protein Homology CDS 13205 13846 . + 0 ID=cds-WP_046426785.1;Parent=gene-LDO38_RS02445;Dbxref=GenBank:WP_046426785.1;Name=WP_046426785.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180210.1;locus_tag=LDO38_RS02445;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_046426785.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 14010 14765 . + . ID=gene-LDO38_RS02450;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=LDO38_RS02450;old_locus_tag=BVI2075_1180020 NZ_CAJZAL010000022.1 Protein Homology CDS 14010 14765 . + 0 ID=cds-WP_011883057.1;Parent=gene-LDO38_RS02450;Dbxref=GenBank:WP_011883057.1;Name=WP_011883057.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883057.1;locus_tag=LDO38_RS02450;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_011883057.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 14872 15645 . + . ID=gene-LDO38_RS02455;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=LDO38_RS02455;old_locus_tag=BVI2075_1180021 NZ_CAJZAL010000022.1 Protein Homology CDS 14872 15645 . + 0 ID=cds-WP_011883058.1;Parent=gene-LDO38_RS02455;Dbxref=GenBank:WP_011883058.1;Name=WP_011883058.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362933.1;locus_tag=LDO38_RS02455;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_011883058.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 15645 16061 . + . ID=gene-LDO38_RS02460;Name=hisI;gbkey=Gene;gene=hisI;gene_biotype=protein_coding;locus_tag=LDO38_RS02460;old_locus_tag=BVI2075_1180022 NZ_CAJZAL010000022.1 Protein Homology CDS 15645 16061 . + 0 ID=cds-WP_011883059.1;Parent=gene-LDO38_RS02460;Dbxref=GenBank:WP_011883059.1;Name=WP_011883059.1;Ontology_term=GO:0000105,GO:0004635;gbkey=CDS;gene=hisI;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494429.1;locus_tag=LDO38_RS02460;product=phosphoribosyl-AMP cyclohydrolase;protein_id=WP_011883059.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 16058 16423 . + . ID=gene-LDO38_RS02465;Name=LDO38_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02465;old_locus_tag=BVI2075_1180023 NZ_CAJZAL010000022.1 Protein Homology CDS 16058 16423 . + 0 ID=cds-WP_011883060.1;Parent=gene-LDO38_RS02465;Dbxref=GenBank:WP_011883060.1;Name=WP_011883060.1;Ontology_term=GO:0000105,GO:0004636;gbkey=CDS;go_function=phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883060.1;locus_tag=LDO38_RS02465;product=phosphoribosyl-ATP diphosphatase;protein_id=WP_011883060.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 16505 16897 . + . ID=gene-LDO38_RS02470;Name=LDO38_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02470;old_locus_tag=BVI2075_1180024 NZ_CAJZAL010000022.1 Protein Homology CDS 16505 16897 . + 0 ID=cds-WP_011883061.1;Parent=gene-LDO38_RS02470;Dbxref=GenBank:WP_011883061.1;Name=WP_011883061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883061.1;locus_tag=LDO38_RS02470;product=DUF4870 family protein;protein_id=WP_011883061.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 16926 17291 . + . ID=gene-LDO38_RS02475;Name=LDO38_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02475;old_locus_tag=BVI2075_1180025 NZ_CAJZAL010000022.1 Protein Homology CDS 16926 17291 . + 0 ID=cds-WP_011546602.1;Parent=gene-LDO38_RS02475;Dbxref=GenBank:WP_011546602.1;Name=WP_011546602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185206.1;locus_tag=LDO38_RS02475;product=histidine triad nucleotide-binding protein;protein_id=WP_011546602.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 17386 17616 . + . ID=gene-LDO38_RS02480;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=LDO38_RS02480;old_locus_tag=BVI2075_1180026 NZ_CAJZAL010000022.1 Protein Homology CDS 17386 17616 . + 0 ID=cds-WP_006751795.1;Parent=gene-LDO38_RS02480;Dbxref=GenBank:WP_006751795.1;Name=WP_006751795.1;Ontology_term=GO:0043953,GO:0016020;gbkey=CDS;gene=tatA;go_component=membrane|0016020||IEA;go_process=protein transport by the Tat complex|0043953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477115.1;locus_tag=LDO38_RS02480;product=Sec-independent protein translocase subunit TatA;protein_id=WP_006751795.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 17643 18176 . + . ID=gene-LDO38_RS02485;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=LDO38_RS02485;old_locus_tag=BVI2075_1180027 NZ_CAJZAL010000022.1 Protein Homology CDS 17643 18176 . + 0 ID=cds-WP_059463945.1;Parent=gene-LDO38_RS02485;Dbxref=GenBank:WP_059463945.1;Name=WP_059463945.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477114.1;locus_tag=LDO38_RS02485;product=Sec-independent protein translocase protein TatB;protein_id=WP_059463945.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 18218 19000 . + . ID=gene-LDO38_RS02490;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=LDO38_RS02490;old_locus_tag=BVI2075_1180028 NZ_CAJZAL010000022.1 Protein Homology CDS 18218 19000 . + 0 ID=cds-WP_011883064.1;Parent=gene-LDO38_RS02490;Dbxref=GenBank:WP_011883064.1;Name=WP_011883064.1;Ontology_term=GO:0015628,GO:0005886;gbkey=CDS;gene=tatC;go_component=plasma membrane|0005886||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757066.1;locus_tag=LDO38_RS02490;product=twin-arginine translocase subunit TatC;protein_id=WP_011883064.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 19146 20354 . - . ID=gene-LDO38_RS02495;Name=LDO38_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02495;old_locus_tag=BVI2075_1180029 NZ_CAJZAL010000022.1 Protein Homology CDS 19146 20354 . - 0 ID=cds-WP_011883065.1;Parent=gene-LDO38_RS02495;Dbxref=GenBank:WP_011883065.1;Name=WP_011883065.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751792.1;locus_tag=LDO38_RS02495;product=Do family serine endopeptidase;protein_id=WP_011883065.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 20376 21122 . + . ID=gene-LDO38_RS02500;Name=LDO38_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02500;old_locus_tag=BVI2075_1180030 NZ_CAJZAL010000022.1 Protein Homology CDS 20376 21122 . + 0 ID=cds-WP_059460383.1;Parent=gene-LDO38_RS02500;Dbxref=GenBank:WP_059460383.1;Name=WP_059460383.1;Ontology_term=GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906350.1;locus_tag=LDO38_RS02500;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_059460383.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 21342 21962 . + . ID=gene-LDO38_RS02505;Name=petA;gbkey=Gene;gene=petA;gene_biotype=protein_coding;locus_tag=LDO38_RS02505;old_locus_tag=BVI2075_1180031 NZ_CAJZAL010000022.1 Protein Homology CDS 21342 21962 . + 0 ID=cds-WP_011883067.1;Parent=gene-LDO38_RS02505;Dbxref=GenBank:WP_011883067.1;Name=WP_011883067.1;Ontology_term=GO:0009060,GO:0008121,GO:0009055,GO:0045275;gbkey=CDS;gene=petA;go_component=respiratory chain complex III|0045275||IEA;go_function=quinol-cytochrome-c reductase activity|0008121||IEA,electron transfer activity|0009055||IEA;go_process=aerobic respiration|0009060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491868.1;locus_tag=LDO38_RS02505;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;protein_id=WP_011883067.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 21962 23344 . + . ID=gene-LDO38_RS02510;Name=LDO38_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02510;old_locus_tag=BVI2075_1180032 NZ_CAJZAL010000022.1 Protein Homology CDS 21962 23344 . + 0 ID=cds-WP_011883068.1;Parent=gene-LDO38_RS02510;Dbxref=GenBank:WP_011883068.1;Name=WP_011883068.1;Ontology_term=GO:0022904,GO:0008121,GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=quinol-cytochrome-c reductase activity|0008121||IEA,electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199894.1;locus_tag=LDO38_RS02510;product=cytochrome b;protein_id=WP_011883068.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 23366 24124 . + . ID=gene-LDO38_RS02515;Name=LDO38_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02515;old_locus_tag=BVI2075_1180033 NZ_CAJZAL010000022.1 Protein Homology CDS 23366 24124 . + 0 ID=cds-WP_011883069.1;Parent=gene-LDO38_RS02515;Dbxref=GenBank:WP_011883069.1;Name=WP_011883069.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199892.1;locus_tag=LDO38_RS02515;product=cytochrome c1;protein_id=WP_011883069.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 24219 24830 . + . ID=gene-LDO38_RS02520;Name=LDO38_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02520;old_locus_tag=BVI2075_1180034 NZ_CAJZAL010000022.1 Protein Homology CDS 24219 24830 . + 0 ID=cds-WP_006400565.1;Parent=gene-LDO38_RS02520;Dbxref=GenBank:WP_006400565.1;Name=WP_006400565.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006999756.1;locus_tag=LDO38_RS02520;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_006400565.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 24902 25408 . + . ID=gene-LDO38_RS02525;Name=LDO38_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02525;old_locus_tag=BVI2075_1180035 NZ_CAJZAL010000022.1 Protein Homology CDS 24902 25408 . + 0 ID=cds-WP_014722317.1;Parent=gene-LDO38_RS02525;Dbxref=GenBank:WP_014722317.1;Name=WP_014722317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412425.1;locus_tag=LDO38_RS02525;product=ClpXP protease specificity-enhancing factor;protein_id=WP_014722317.1;transl_table=11 NZ_CAJZAL010000022.1 RefSeq gene 25428 25503 . + . ID=gene-LDO38_RS02530;Name=LDO38_RS02530;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS02530;old_locus_tag=BVI2075_TRNA27 NZ_CAJZAL010000022.1 tRNAscan-SE tRNA 25428 25503 . + . ID=rna-LDO38_RS02530;Parent=gene-LDO38_RS02530;anticodon=(pos:25461..25463);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS02530;product=tRNA-Thr NZ_CAJZAL010000022.1 tRNAscan-SE exon 25428 25503 . + . ID=exon-LDO38_RS02530-1;Parent=rna-LDO38_RS02530;anticodon=(pos:25461..25463);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS02530;product=tRNA-Thr ##sequence-region NZ_CAJZAL010000023.1 1 1689 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000023.1 RefSeq region 1 1689 . + . ID=NZ_CAJZAL010000023.1:1..1689;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_119 NZ_CAJZAL010000023.1 RefSeq gene 1 688 . + . ID=gene-LDO38_RS02535;Name=LDO38_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02535;old_locus_tag=BVI2075_1190001;partial=true;start_range=.,1 NZ_CAJZAL010000023.1 Protein Homology CDS 1 688 . + 1 ID=cds-WP_224056171.1;Parent=gene-LDO38_RS02535;Dbxref=GenBank:WP_224056171.1;Name=WP_224056171.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479669.1;locus_tag=LDO38_RS02535;partial=true;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_224056171.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000023.1 RefSeq gene 685 1467 . + . ID=gene-LDO38_RS02540;Name=LDO38_RS02540;end_range=1467,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02540;old_locus_tag=BVI2075_1190003;partial=true NZ_CAJZAL010000023.1 Protein Homology CDS 685 1467 . + 0 ID=cds-WP_224020085.1;Parent=gene-LDO38_RS02540;Dbxref=GenBank:WP_224020085.1;Name=WP_224020085.1;end_range=1467,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014193682.1;locus_tag=LDO38_RS02540;partial=true;product=extracellular solute-binding protein;protein_id=WP_224020085.1;transl_table=11 NZ_CAJZAL010000023.1 RefSeq pseudogene 1478 1610 . + . ID=gene-LDO38_RS30260;Name=LDO38_RS30260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30260;old_locus_tag=BVI2075_1190004;partial=true;pseudo=true;start_range=.,1478 NZ_CAJZAL010000023.1 Protein Homology CDS 1478 1610 . + 1 ID=cds-LDO38_RS30260;Parent=gene-LDO38_RS30260;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408991.1;locus_tag=LDO38_RS30260;partial=true;product=ABC transporter substrate-binding protein;pseudo=true;start_range=.,1478;transl_table=11 ##sequence-region NZ_CAJZAL010000024.1 1 148566 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000024.1 RefSeq region 1 148566 . + . ID=NZ_CAJZAL010000024.1:1..148566;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_12 NZ_CAJZAL010000024.1 RefSeq pseudogene 1 247 . + . ID=gene-LDO38_RS02545;Name=LDO38_RS02545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS02545;old_locus_tag=BVI2075_120001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000024.1 Protein Homology CDS 1 247 . + 1 ID=cds-LDO38_RS02545;Parent=gene-LDO38_RS02545;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338270.1;locus_tag=LDO38_RS02545;partial=true;product=cytochrome c;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 290 1246 . + . ID=gene-LDO38_RS02550;Name=LDO38_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02550;old_locus_tag=BVI2075_120002 NZ_CAJZAL010000024.1 Protein Homology CDS 290 1246 . + 0 ID=cds-WP_124259682.1;Parent=gene-LDO38_RS02550;Dbxref=GenBank:WP_124259682.1;Name=WP_124259682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217070.1;locus_tag=LDO38_RS02550;product=ABC transporter substrate-binding protein;protein_id=WP_124259682.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 1377 2243 . + . ID=gene-LDO38_RS02555;Name=LDO38_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02555;old_locus_tag=BVI2075_120003 NZ_CAJZAL010000024.1 Protein Homology CDS 1377 2243 . + 0 ID=cds-WP_124259683.1;Parent=gene-LDO38_RS02555;Dbxref=GenBank:WP_124259683.1;Name=WP_124259683.1;Ontology_term=GO:0016661,GO:0030151,GO:0030170,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338272.1;locus_tag=LDO38_RS02555;product=MOSC domain-containing protein;protein_id=WP_124259683.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 2388 3791 . - . ID=gene-LDO38_RS02560;Name=LDO38_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02560;old_locus_tag=BVI2075_120004 NZ_CAJZAL010000024.1 Protein Homology CDS 2388 3791 . - 0 ID=cds-WP_059461081.1;Parent=gene-LDO38_RS02560;Dbxref=GenBank:WP_059461081.1;Name=WP_059461081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882101.1;locus_tag=LDO38_RS02560;product=sensor histidine kinase;protein_id=WP_059461081.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 3823 4497 . - . ID=gene-LDO38_RS02565;Name=LDO38_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02565;old_locus_tag=BVI2075_120005 NZ_CAJZAL010000024.1 Protein Homology CDS 3823 4497 . - 0 ID=cds-WP_011882100.1;Parent=gene-LDO38_RS02565;Dbxref=GenBank:WP_011882100.1;Name=WP_011882100.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467903.1;locus_tag=LDO38_RS02565;product=response regulator;protein_id=WP_011882100.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 4729 5817 . + . ID=gene-LDO38_RS02570;Name=LDO38_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02570;old_locus_tag=BVI2075_120006 NZ_CAJZAL010000024.1 Protein Homology CDS 4729 5817 . + 0 ID=cds-WP_011882099.1;Parent=gene-LDO38_RS02570;Dbxref=GenBank:WP_011882099.1;Name=WP_011882099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355369.1;locus_tag=LDO38_RS02570;product=ABC transporter substrate-binding protein;protein_id=WP_011882099.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 5935 7707 . + . ID=gene-LDO38_RS02575;Name=LDO38_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02575;old_locus_tag=BVI2075_120007 NZ_CAJZAL010000024.1 Protein Homology CDS 5935 7707 . + 0 ID=cds-WP_014724978.1;Parent=gene-LDO38_RS02575;Dbxref=GenBank:WP_014724978.1;Name=WP_014724978.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899532.1;locus_tag=LDO38_RS02575;product=ABC transporter permease;protein_id=WP_014724978.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 7700 8767 . + . ID=gene-LDO38_RS02580;Name=LDO38_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02580;old_locus_tag=BVI2075_120008 NZ_CAJZAL010000024.1 Protein Homology CDS 7700 8767 . + 0 ID=cds-WP_059734502.1;Parent=gene-LDO38_RS02580;Dbxref=GenBank:WP_059734502.1;Name=WP_059734502.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724979.1;locus_tag=LDO38_RS02580;product=ABC transporter ATP-binding protein;protein_id=WP_059734502.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 8931 10022 . + . ID=gene-LDO38_RS02585;Name=LDO38_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02585;old_locus_tag=BVI2075_120010 NZ_CAJZAL010000024.1 Protein Homology CDS 8931 10022 . + 0 ID=cds-WP_059895017.1;Parent=gene-LDO38_RS02585;Dbxref=GenBank:WP_059895017.1;Name=WP_059895017.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490700.1;locus_tag=LDO38_RS02585;product=porin;protein_id=WP_059895017.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 10144 11106 . - . ID=gene-LDO38_RS02590;Name=LDO38_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02590;old_locus_tag=BVI2075_120011 NZ_CAJZAL010000024.1 Protein Homology CDS 10144 11106 . - 0 ID=cds-WP_059460176.1;Parent=gene-LDO38_RS02590;Dbxref=GenBank:WP_059460176.1;Name=WP_059460176.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554,GO:0048038;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724982.1;locus_tag=LDO38_RS02590;product=quinone oxidoreductase family protein;protein_id=WP_059460176.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 11150 11401 . - . ID=gene-LDO38_RS02595;Name=LDO38_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02595;old_locus_tag=BVI2075_120012 NZ_CAJZAL010000024.1 Protein Homology CDS 11150 11401 . - 0 ID=cds-WP_014724983.1;Parent=gene-LDO38_RS02595;Dbxref=GenBank:WP_014724983.1;Name=WP_014724983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490702.1;locus_tag=LDO38_RS02595;product=hypothetical protein;protein_id=WP_014724983.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 11498 12295 . + . ID=gene-LDO38_RS02600;Name=LDO38_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02600;old_locus_tag=BVI2075_120013 NZ_CAJZAL010000024.1 Protein Homology CDS 11498 12295 . + 0 ID=cds-WP_060093090.1;Parent=gene-LDO38_RS02600;Dbxref=GenBank:WP_060093090.1;Name=WP_060093090.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882093.1;locus_tag=LDO38_RS02600;product=AraC family transcriptional regulator;protein_id=WP_060093090.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 12393 13199 . - . ID=gene-LDO38_RS02605;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=LDO38_RS02605;old_locus_tag=BVI2075_120014 NZ_CAJZAL010000024.1 Protein Homology CDS 12393 13199 . - 0 ID=cds-WP_011882092.1;Parent=gene-LDO38_RS02605;Dbxref=GenBank:WP_011882092.1;Name=WP_011882092.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494968.1;locus_tag=LDO38_RS02605;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_011882092.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 13214 14017 . - . ID=gene-LDO38_RS02610;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=LDO38_RS02610;old_locus_tag=BVI2075_120015 NZ_CAJZAL010000024.1 Protein Homology CDS 13214 14017 . - 0 ID=cds-WP_045578059.1;Parent=gene-LDO38_RS02610;Dbxref=GenBank:WP_045578059.1;Name=WP_045578059.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765816.1;locus_tag=LDO38_RS02610;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=WP_045578059.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 14038 14430 . - . ID=gene-LDO38_RS02615;Name=LDO38_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02615;old_locus_tag=BVI2075_120016 NZ_CAJZAL010000024.1 Protein Homology CDS 14038 14430 . - 0 ID=cds-WP_069246502.1;Parent=gene-LDO38_RS02615;Dbxref=GenBank:WP_069246502.1;Name=WP_069246502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479169.1;locus_tag=LDO38_RS02615;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_069246502.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 14460 15308 . - . ID=gene-LDO38_RS02620;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=LDO38_RS02620;old_locus_tag=BVI2075_120017 NZ_CAJZAL010000024.1 Protein Homology CDS 14460 15308 . - 0 ID=cds-WP_011882089.1;Parent=gene-LDO38_RS02620;Dbxref=GenBank:WP_011882089.1;Name=WP_011882089.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882089.1;locus_tag=LDO38_RS02620;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_011882089.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 15358 16821 . - . ID=gene-LDO38_RS02625;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=LDO38_RS02625;old_locus_tag=BVI2075_120019 NZ_CAJZAL010000024.1 Protein Homology CDS 15358 16821 . - 0 ID=cds-WP_069246503.1;Parent=gene-LDO38_RS02625;Dbxref=GenBank:WP_069246503.1;Name=WP_069246503.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009900809.1;locus_tag=LDO38_RS02625;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_069246503.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 16844 17608 . - . ID=gene-LDO38_RS02630;Name=LDO38_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02630;old_locus_tag=BVI2075_120020 NZ_CAJZAL010000024.1 Protein Homology CDS 16844 17608 . - 0 ID=cds-WP_045578061.1;Parent=gene-LDO38_RS02630;Dbxref=GenBank:WP_045578061.1;Name=WP_045578061.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765813.1;locus_tag=LDO38_RS02630;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_045578061.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 17605 18300 . - . ID=gene-LDO38_RS02635;Name=LDO38_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02635;old_locus_tag=BVI2075_120021 NZ_CAJZAL010000024.1 Protein Homology CDS 17605 18300 . - 0 ID=cds-WP_059559552.1;Parent=gene-LDO38_RS02635;Dbxref=GenBank:WP_059559552.1;Name=WP_059559552.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415060.1;locus_tag=LDO38_RS02635;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_059559552.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 18453 18893 . + . ID=gene-LDO38_RS02640;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=LDO38_RS02640;old_locus_tag=BVI2075_120022 NZ_CAJZAL010000024.1 Protein Homology CDS 18453 18893 . + 0 ID=cds-WP_011882085.1;Parent=gene-LDO38_RS02640;Dbxref=GenBank:WP_011882085.1;Name=WP_011882085.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882085.1;locus_tag=LDO38_RS02640;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_011882085.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 18976 20181 . - . ID=gene-LDO38_RS02645;Name=LDO38_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02645;old_locus_tag=BVI2075_120023 NZ_CAJZAL010000024.1 Protein Homology CDS 18976 20181 . - 0 ID=cds-WP_014724990.1;Parent=gene-LDO38_RS02645;Dbxref=GenBank:WP_014724990.1;Name=WP_014724990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658669.1;locus_tag=LDO38_RS02645;product=SDR family oxidoreductase;protein_id=WP_014724990.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 20744 21091 . + . ID=gene-LDO38_RS02650;Name=LDO38_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02650;old_locus_tag=BVI2075_120025 NZ_CAJZAL010000024.1 Protein Homology CDS 20744 21091 . + 0 ID=cds-WP_034193484.1;Parent=gene-LDO38_RS02650;Dbxref=GenBank:WP_034193484.1;Name=WP_034193484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882083.1;locus_tag=LDO38_RS02650;product=DUF3564 family protein;protein_id=WP_034193484.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 21468 23372 . + . ID=gene-LDO38_RS02655;Name=LDO38_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02655;old_locus_tag=BVI2075_120027 NZ_CAJZAL010000024.1 Protein Homology CDS 21468 23372 . + 0 ID=cds-WP_034193483.1;Parent=gene-LDO38_RS02655;Dbxref=GenBank:WP_034193483.1;Name=WP_034193483.1;Ontology_term=GO:0009252,GO:0051301,GO:0071555,GO:0008658,GO:0008955,GO:0009002,GO:0016787,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479178.1;locus_tag=LDO38_RS02655;product=peptidoglycan D%2CD-transpeptidase FtsI family protein;protein_id=WP_034193483.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 23729 25444 . - . ID=gene-LDO38_RS02660;Name=LDO38_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02660;old_locus_tag=BVI2075_120028 NZ_CAJZAL010000024.1 Protein Homology CDS 23729 25444 . - 0 ID=cds-WP_069246504.1;Parent=gene-LDO38_RS02660;Dbxref=GenBank:WP_069246504.1;Name=WP_069246504.1;Ontology_term=GO:0006812,GO:0055085,GO:1902600,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365925.1;locus_tag=LDO38_RS02660;product=cation:proton antiporter domain-containing protein;protein_id=WP_069246504.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 25690 27114 . - . ID=gene-LDO38_RS02665;Name=LDO38_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02665;old_locus_tag=BVI2075_120029 NZ_CAJZAL010000024.1 Protein Homology CDS 25690 27114 . - 0 ID=cds-WP_045578067.1;Parent=gene-LDO38_RS02665;Dbxref=GenBank:WP_045578067.1;Name=WP_045578067.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547847.1;locus_tag=LDO38_RS02665;product=c-type cytochrome;protein_id=WP_045578067.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 27111 28889 . - . ID=gene-LDO38_RS02670;Name=LDO38_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02670;old_locus_tag=BVI2075_120030 NZ_CAJZAL010000024.1 Protein Homology CDS 27111 28889 . - 0 ID=cds-WP_059461089.1;Parent=gene-LDO38_RS02670;Dbxref=GenBank:WP_059461089.1;Name=WP_059461089.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759726.1;locus_tag=LDO38_RS02670;product=GMC family oxidoreductase;protein_id=WP_059461089.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 28889 29629 . - . ID=gene-LDO38_RS02675;Name=LDO38_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02675;old_locus_tag=BVI2075_120031 NZ_CAJZAL010000024.1 Protein Homology CDS 28889 29629 . - 0 ID=cds-WP_034193480.1;Parent=gene-LDO38_RS02675;Dbxref=GenBank:WP_034193480.1;Name=WP_034193480.1;Ontology_term=GO:0008873,GO:0008875;gbkey=CDS;go_function=gluconate 2-dehydrogenase activity|0008873||IEA,gluconate dehydrogenase activity|0008875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415138.1;locus_tag=LDO38_RS02675;product=gluconate 2-dehydrogenase subunit 3 family protein;protein_id=WP_034193480.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 30162 30578 . - . ID=gene-LDO38_RS02680;Name=LDO38_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02680;old_locus_tag=BVI2075_120032 NZ_CAJZAL010000024.1 Protein Homology CDS 30162 30578 . - 0 ID=cds-WP_011882077.1;Parent=gene-LDO38_RS02680;Dbxref=GenBank:WP_011882077.1;Name=WP_011882077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882077.1;locus_tag=LDO38_RS02680;product=DUF3995 domain-containing protein;protein_id=WP_011882077.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 30901 32016 . + . ID=gene-LDO38_RS02685;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=LDO38_RS02685;old_locus_tag=BVI2075_120033 NZ_CAJZAL010000024.1 Protein Homology CDS 30901 32016 . + 0 ID=cds-WP_046428493.1;Parent=gene-LDO38_RS02685;Dbxref=GenBank:WP_046428493.1;Name=WP_046428493.1;Ontology_term=GO:0042853,GO:0000286;gbkey=CDS;gene=ald;go_function=alanine dehydrogenase activity|0000286||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493090.1;locus_tag=LDO38_RS02685;product=alanine dehydrogenase;protein_id=WP_046428493.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 32083 32475 . - . ID=gene-LDO38_RS02690;Name=LDO38_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02690;old_locus_tag=BVI2075_120034 NZ_CAJZAL010000024.1 Protein Homology CDS 32083 32475 . - 0 ID=cds-WP_011882075.1;Parent=gene-LDO38_RS02690;Dbxref=GenBank:WP_011882075.1;Name=WP_011882075.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759722.1;locus_tag=LDO38_RS02690;product=TraR/DksA family transcriptional regulator;protein_id=WP_011882075.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 32811 32984 . + . ID=gene-LDO38_RS02695;Name=LDO38_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02695;old_locus_tag=BVI2075_120035 NZ_CAJZAL010000024.1 Protein Homology CDS 32811 32984 . + 0 ID=cds-WP_164716064.1;Parent=gene-LDO38_RS02695;Dbxref=GenBank:WP_164716064.1;Name=WP_164716064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724999.1;locus_tag=LDO38_RS02695;product=hypothetical protein;protein_id=WP_164716064.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 33147 34319 . - . ID=gene-LDO38_RS02700;Name=LDO38_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02700;old_locus_tag=BVI2075_120036 NZ_CAJZAL010000024.1 Protein Homology CDS 33147 34319 . - 0 ID=cds-WP_069240145.1;Parent=gene-LDO38_RS02700;Dbxref=GenBank:WP_069240145.1;Name=WP_069240145.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882074.1;locus_tag=LDO38_RS02700;product=glycosyltransferase family 4 protein;protein_id=WP_069240145.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 34474 35880 . - . ID=gene-LDO38_RS02705;Name=LDO38_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02705;old_locus_tag=BVI2075_120037 NZ_CAJZAL010000024.1 Protein Homology CDS 34474 35880 . - 0 ID=cds-WP_034193551.1;Parent=gene-LDO38_RS02705;Dbxref=GenBank:WP_034193551.1;Name=WP_034193551.1;Ontology_term=GO:0016780;gbkey=CDS;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547855.1;locus_tag=LDO38_RS02705;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_034193551.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 35892 36674 . - . ID=gene-LDO38_RS02710;Name=LDO38_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02710;old_locus_tag=BVI2075_120038 NZ_CAJZAL010000024.1 Protein Homology CDS 35892 36674 . - 0 ID=cds-WP_011882072.1;Parent=gene-LDO38_RS02710;Dbxref=GenBank:WP_011882072.1;Name=WP_011882072.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882072.1;locus_tag=LDO38_RS02710;product=Crp/Fnr family transcriptional regulator;protein_id=WP_011882072.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 37632 38372 . + . ID=gene-LDO38_RS02715;Name=LDO38_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02715;old_locus_tag=BVI2075_120040 NZ_CAJZAL010000024.1 Protein Homology CDS 37632 38372 . + 0 ID=cds-WP_011882070.1;Parent=gene-LDO38_RS02715;Dbxref=GenBank:WP_011882070.1;Name=WP_011882070.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882070.1;locus_tag=LDO38_RS02715;product=Crp/Fnr family transcriptional regulator;protein_id=WP_011882070.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 38541 38792 . + . ID=gene-LDO38_RS02720;Name=LDO38_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02720;old_locus_tag=BVI2075_120042 NZ_CAJZAL010000024.1 Protein Homology CDS 38541 38792 . + 0 ID=cds-WP_011882069.1;Parent=gene-LDO38_RS02720;Dbxref=GenBank:WP_011882069.1;Name=WP_011882069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522820.1;locus_tag=LDO38_RS02720;product=acyl carrier protein;protein_id=WP_011882069.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 38789 39985 . + . ID=gene-LDO38_RS02725;Name=LDO38_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02725;old_locus_tag=BVI2075_120041 NZ_CAJZAL010000024.1 Protein Homology CDS 38789 39985 . + 0 ID=cds-WP_014725002.1;Parent=gene-LDO38_RS02725;Dbxref=GenBank:WP_014725002.1;Name=WP_014725002.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658656.1;locus_tag=LDO38_RS02725;product=acyl-CoA dehydrogenase family protein;protein_id=WP_014725002.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 39982 40971 . + . ID=gene-LDO38_RS02730;Name=LDO38_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02730;old_locus_tag=BVI2075_120043 NZ_CAJZAL010000024.1 Protein Homology CDS 39982 40971 . + 0 ID=cds-WP_060122400.1;Parent=gene-LDO38_RS02730;Dbxref=GenBank:WP_060122400.1;Name=WP_060122400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547858.1;locus_tag=LDO38_RS02730;product=amino acid--[acyl-carrier-protein] ligase;protein_id=WP_060122400.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 40968 42026 . + . ID=gene-LDO38_RS02735;Name=LDO38_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02735;old_locus_tag=BVI2075_120044 NZ_CAJZAL010000024.1 Protein Homology CDS 40968 42026 . + 0 ID=cds-WP_069240617.1;Parent=gene-LDO38_RS02735;Dbxref=GenBank:WP_069240617.1;Name=WP_069240617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365914.1;locus_tag=LDO38_RS02735;product=DUF1839 family protein;protein_id=WP_069240617.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 42056 44497 . + . ID=gene-LDO38_RS02740;Name=LDO38_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02740;old_locus_tag=BVI2075_120045 NZ_CAJZAL010000024.1 Protein Homology CDS 42056 44497 . + 0 ID=cds-WP_224056172.1;Parent=gene-LDO38_RS02740;Dbxref=GenBank:WP_224056172.1;Name=WP_224056172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882065.1;locus_tag=LDO38_RS02740;product=glycosyl hydrolase 2 galactose-binding domain-containing protein;protein_id=WP_224056172.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 44543 45934 . - . ID=gene-LDO38_RS02745;Name=LDO38_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02745;old_locus_tag=BVI2075_120046 NZ_CAJZAL010000024.1 Protein Homology CDS 44543 45934 . - 0 ID=cds-WP_011882064.1;Parent=gene-LDO38_RS02745;Dbxref=GenBank:WP_011882064.1;Name=WP_011882064.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217119.1;locus_tag=LDO38_RS02745;product=sigma-54 dependent transcriptional regulator;protein_id=WP_011882064.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 46624 47856 . - . ID=gene-LDO38_RS02750;Name=LDO38_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02750;old_locus_tag=BVI2075_120047 NZ_CAJZAL010000024.1 Protein Homology CDS 46624 47856 . - 0 ID=cds-WP_034193476.1;Parent=gene-LDO38_RS02750;Dbxref=GenBank:WP_034193476.1;Name=WP_034193476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725006.1;locus_tag=LDO38_RS02750;product=glycosyltransferase family 4 protein;protein_id=WP_034193476.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 48135 48719 . + . ID=gene-LDO38_RS02755;Name=LDO38_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02755;old_locus_tag=BVI2075_120048 NZ_CAJZAL010000024.1 Protein Homology CDS 48135 48719 . + 0 ID=cds-WP_045578069.1;Parent=gene-LDO38_RS02755;Dbxref=GenBank:WP_045578069.1;Name=WP_045578069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882061.1;locus_tag=LDO38_RS02755;product=drug:proton antiporter;protein_id=WP_045578069.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 48716 50236 . + . ID=gene-LDO38_RS02760;Name=LDO38_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02760;old_locus_tag=BVI2075_120049 NZ_CAJZAL010000024.1 Protein Homology CDS 48716 50236 . + 0 ID=cds-WP_011882060.1;Parent=gene-LDO38_RS02760;Dbxref=GenBank:WP_011882060.1;Name=WP_011882060.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725008.1;locus_tag=LDO38_RS02760;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_011882060.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 50319 51551 . - . ID=gene-LDO38_RS02765;Name=LDO38_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02765;old_locus_tag=BVI2075_120050 NZ_CAJZAL010000024.1 Protein Homology CDS 50319 51551 . - 0 ID=cds-WP_059604727.1;Parent=gene-LDO38_RS02765;Dbxref=GenBank:WP_059604727.1;Name=WP_059604727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882059.1;locus_tag=LDO38_RS02765;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_059604727.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 51648 52793 . - . ID=gene-LDO38_RS02770;Name=LDO38_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02770;old_locus_tag=BVI2075_120051 NZ_CAJZAL010000024.1 Protein Homology CDS 51648 52793 . - 0 ID=cds-WP_059474300.1;Parent=gene-LDO38_RS02770;Dbxref=GenBank:WP_059474300.1;Name=WP_059474300.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882058.1;locus_tag=LDO38_RS02770;product=acyltransferase family protein;protein_id=WP_059474300.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 53014 54438 . - . ID=gene-LDO38_RS02775;Name=LDO38_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02775;old_locus_tag=BVI2075_120053 NZ_CAJZAL010000024.1 Protein Homology CDS 53014 54438 . - 0 ID=cds-WP_069240143.1;Parent=gene-LDO38_RS02775;Dbxref=GenBank:WP_069240143.1;Name=WP_069240143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882057.1;locus_tag=LDO38_RS02775;product=DUF6418 domain-containing protein;protein_id=WP_069240143.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 54598 56913 . - . ID=gene-LDO38_RS02780;Name=LDO38_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02780;old_locus_tag=BVI2075_120054 NZ_CAJZAL010000024.1 Protein Homology CDS 54598 56913 . - 0 ID=cds-WP_060044452.1;Parent=gene-LDO38_RS02780;Dbxref=GenBank:WP_060044452.1;Name=WP_060044452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882056.1;locus_tag=LDO38_RS02780;product=GNVR domain-containing protein;protein_id=WP_060044452.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 57504 58685 . + . ID=gene-LDO38_RS02785;Name=LDO38_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02785;old_locus_tag=BVI2075_120056 NZ_CAJZAL010000024.1 Protein Homology CDS 57504 58685 . + 0 ID=cds-WP_069240142.1;Parent=gene-LDO38_RS02785;Dbxref=GenBank:WP_069240142.1;Name=WP_069240142.1;Ontology_term=GO:0015774,GO:0015159,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=polysaccharide transmembrane transporter activity|0015159||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882055.1;locus_tag=LDO38_RS02785;product=polysaccharide biosynthesis/export family protein;protein_id=WP_069240142.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 58813 60066 . - . ID=gene-LDO38_RS02790;Name=LDO38_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02790;old_locus_tag=BVI2075_120057 NZ_CAJZAL010000024.1 Protein Homology CDS 58813 60066 . - 0 ID=cds-WP_014725014.1;Parent=gene-LDO38_RS02790;Dbxref=GenBank:WP_014725014.1;Name=WP_014725014.1;Ontology_term=GO:0140327,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=flippase activity|0140327||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882054.1;locus_tag=LDO38_RS02790;product=flippase;protein_id=WP_014725014.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 60104 61294 . - . ID=gene-LDO38_RS02795;Name=LDO38_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02795;old_locus_tag=BVI2075_120058 NZ_CAJZAL010000024.1 Protein Homology CDS 60104 61294 . - 0 ID=cds-WP_041494151.1;Parent=gene-LDO38_RS02795;Dbxref=GenBank:WP_041494151.1;Name=WP_041494151.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882053.1;locus_tag=LDO38_RS02795;product=glycosyltransferase family 4 protein;protein_id=WP_041494151.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 61637 63412 . - . ID=gene-LDO38_RS02800;Name=LDO38_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02800;old_locus_tag=BVI2075_120059 NZ_CAJZAL010000024.1 Protein Homology CDS 61637 63412 . - 0 ID=cds-WP_069240616.1;Parent=gene-LDO38_RS02800;Dbxref=GenBank:WP_069240616.1;Name=WP_069240616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725016.1;locus_tag=LDO38_RS02800;product=serine aminopeptidase domain-containing protein;protein_id=WP_069240616.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 64429 66630 . + . ID=gene-LDO38_RS02805;Name=LDO38_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02805;old_locus_tag=BVI2075_120060 NZ_CAJZAL010000024.1 Protein Homology CDS 64429 66630 . + 0 ID=cds-WP_224056173.1;Parent=gene-LDO38_RS02805;Dbxref=GenBank:WP_224056173.1;Name=WP_224056173.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217133.1;locus_tag=LDO38_RS02805;product=glycoside hydrolase family 3 C-terminal domain-containing protein;protein_id=WP_224056173.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 66826 68394 . - . ID=gene-LDO38_RS02810;Name=LDO38_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02810;old_locus_tag=BVI2075_120061 NZ_CAJZAL010000024.1 Protein Homology CDS 66826 68394 . - 0 ID=cds-WP_059738551.1;Parent=gene-LDO38_RS02810;Dbxref=GenBank:WP_059738551.1;Name=WP_059738551.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882050.1;locus_tag=LDO38_RS02810;product=methyl-accepting chemotaxis protein;protein_id=WP_059738551.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 68721 69998 . - . ID=gene-LDO38_RS02815;Name=LDO38_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02815;old_locus_tag=BVI2075_120063 NZ_CAJZAL010000024.1 Protein Homology CDS 68721 69998 . - 0 ID=cds-WP_069240141.1;Parent=gene-LDO38_RS02815;Dbxref=GenBank:WP_069240141.1;Name=WP_069240141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694949.1;locus_tag=LDO38_RS02815;product=ATP-binding protein;protein_id=WP_069240141.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 69982 70740 . - . ID=gene-LDO38_RS02820;Name=LDO38_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02820;old_locus_tag=BVI2075_120064 NZ_CAJZAL010000024.1 Protein Homology CDS 69982 70740 . - 0 ID=cds-WP_011882047.1;Parent=gene-LDO38_RS02820;Dbxref=GenBank:WP_011882047.1;Name=WP_011882047.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017773364.1;locus_tag=LDO38_RS02820;product=response regulator;protein_id=WP_011882047.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 71068 72351 . + . ID=gene-LDO38_RS02825;Name=LDO38_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02825;old_locus_tag=BVI2075_120065 NZ_CAJZAL010000024.1 Protein Homology CDS 71068 72351 . + 0 ID=cds-WP_069240140.1;Parent=gene-LDO38_RS02825;Dbxref=GenBank:WP_069240140.1;Name=WP_069240140.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882046.1;locus_tag=LDO38_RS02825;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_069240140.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 72364 75576 . + . ID=gene-LDO38_RS02830;Name=LDO38_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02830;old_locus_tag=BVI2075_120066 NZ_CAJZAL010000024.1 Protein Homology CDS 72364 75576 . + 0 ID=cds-WP_069246505.1;Parent=gene-LDO38_RS02830;Dbxref=GenBank:WP_069246505.1;Name=WP_069246505.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549151.1;locus_tag=LDO38_RS02830;product=efflux RND transporter permease subunit;protein_id=WP_069246505.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 75573 77000 . + . ID=gene-LDO38_RS02835;Name=LDO38_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02835;old_locus_tag=BVI2075_120067 NZ_CAJZAL010000024.1 Protein Homology CDS 75573 77000 . + 0 ID=cds-WP_069240138.1;Parent=gene-LDO38_RS02835;Dbxref=GenBank:WP_069240138.1;Name=WP_069240138.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725022.1;locus_tag=LDO38_RS02835;product=efflux transporter outer membrane subunit;protein_id=WP_069240138.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 77071 77976 . - . ID=gene-LDO38_RS02840;Name=LDO38_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02840;old_locus_tag=BVI2075_120068 NZ_CAJZAL010000024.1 Protein Homology CDS 77071 77976 . - 0 ID=cds-WP_069240137.1;Parent=gene-LDO38_RS02840;Dbxref=GenBank:WP_069240137.1;Name=WP_069240137.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882043.1;locus_tag=LDO38_RS02840;product=LysR family transcriptional regulator;protein_id=WP_069240137.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 78072 79022 . + . ID=gene-LDO38_RS02845;Name=LDO38_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02845;old_locus_tag=BVI2075_120069 NZ_CAJZAL010000024.1 Protein Homology CDS 78072 79022 . + 0 ID=cds-WP_059474327.1;Parent=gene-LDO38_RS02845;Dbxref=GenBank:WP_059474327.1;Name=WP_059474327.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094003.1;locus_tag=LDO38_RS02845;product=ketopantoate reductase family protein;protein_id=WP_059474327.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 79019 79411 . + . ID=gene-LDO38_RS02850;Name=LDO38_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02850;old_locus_tag=BVI2075_120070 NZ_CAJZAL010000024.1 Protein Homology CDS 79019 79411 . + 0 ID=cds-WP_011882041.1;Parent=gene-LDO38_RS02850;Dbxref=GenBank:WP_011882041.1;Name=WP_011882041.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020066714.1;locus_tag=LDO38_RS02850;product=VOC family protein;protein_id=WP_011882041.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 79413 79871 . + . ID=gene-LDO38_RS02855;Name=LDO38_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02855;old_locus_tag=BVI2075_120071 NZ_CAJZAL010000024.1 Protein Homology CDS 79413 79871 . + 0 ID=cds-WP_034193461.1;Parent=gene-LDO38_RS02855;Dbxref=GenBank:WP_034193461.1;Name=WP_034193461.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012427374.1;locus_tag=LDO38_RS02855;product=MaoC family dehydratase;protein_id=WP_034193461.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 79871 81091 . + . ID=gene-LDO38_RS02860;Name=LDO38_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02860;old_locus_tag=BVI2075_120072 NZ_CAJZAL010000024.1 Protein Homology CDS 79871 81091 . + 0 ID=cds-WP_224056174.1;Parent=gene-LDO38_RS02860;Dbxref=GenBank:WP_224056174.1;Name=WP_224056174.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882039.1;locus_tag=LDO38_RS02860;product=CaiB/BaiF CoA transferase family protein;protein_id=WP_224056174.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 81091 81924 . + . ID=gene-LDO38_RS02865;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=LDO38_RS02865;old_locus_tag=BVI2075_120073 NZ_CAJZAL010000024.1 Protein Homology CDS 81091 81924 . + 0 ID=cds-WP_200091599.1;Parent=gene-LDO38_RS02865;Dbxref=GenBank:WP_200091599.1;Name=WP_200091599.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725027.1;locus_tag=LDO38_RS02865;product=shikimate dehydrogenase;protein_id=WP_200091599.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 82114 83754 . - . ID=gene-LDO38_RS02870;Name=LDO38_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02870;old_locus_tag=BVI2075_120074 NZ_CAJZAL010000024.1 Protein Homology CDS 82114 83754 . - 0 ID=cds-WP_224056175.1;Parent=gene-LDO38_RS02870;Dbxref=GenBank:WP_224056175.1;Name=WP_224056175.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882037.1;locus_tag=LDO38_RS02870;product=methyl-accepting chemotaxis protein;protein_id=WP_224056175.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 84401 84988 . + . ID=gene-LDO38_RS02875;Name=LDO38_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02875;old_locus_tag=BVI2075_120076 NZ_CAJZAL010000024.1 Protein Homology CDS 84401 84988 . + 0 ID=cds-WP_011882035.1;Parent=gene-LDO38_RS02875;Dbxref=GenBank:WP_011882035.1;Name=WP_011882035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479209.1;locus_tag=LDO38_RS02875;product=IMPACT family protein;protein_id=WP_011882035.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 85022 85972 . - . ID=gene-LDO38_RS02880;Name=ppk2;gbkey=Gene;gene=ppk2;gene_biotype=protein_coding;locus_tag=LDO38_RS02880;old_locus_tag=BVI2075_120078 NZ_CAJZAL010000024.1 Protein Homology CDS 85022 85972 . - 0 ID=cds-WP_014725030.1;Parent=gene-LDO38_RS02880;Dbxref=GenBank:WP_014725030.1;Name=WP_014725030.1;Ontology_term=GO:0006793,GO:0008976;gbkey=CDS;gene=ppk2;go_function=polyphosphate kinase activity|0008976||IEA;go_process=phosphorus metabolic process|0006793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547877.1;locus_tag=LDO38_RS02880;product=polyphosphate kinase 2;protein_id=WP_014725030.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 86080 87801 . - . ID=gene-LDO38_RS02885;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=LDO38_RS02885;old_locus_tag=BVI2075_120079 NZ_CAJZAL010000024.1 Protein Homology CDS 86080 87801 . - 0 ID=cds-WP_034193457.1;Parent=gene-LDO38_RS02885;Dbxref=GenBank:WP_034193457.1;Name=WP_034193457.1;Ontology_term=GO:0006750,GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione biosynthetic process|0006750||IEA,glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402458.1;locus_tag=LDO38_RS02885;product=gamma-glutamyltransferase;protein_id=WP_034193457.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 88236 88760 . + . ID=gene-LDO38_RS02890;Name=LDO38_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02890;old_locus_tag=BVI2075_120080 NZ_CAJZAL010000024.1 Protein Homology CDS 88236 88760 . + 0 ID=cds-WP_059474289.1;Parent=gene-LDO38_RS02890;Dbxref=GenBank:WP_059474289.1;Name=WP_059474289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217137.1;locus_tag=LDO38_RS02890;product=metal-dependent hydrolase;protein_id=WP_059474289.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 89171 93688 . + . ID=gene-LDO38_RS02895;Name=LDO38_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02895;old_locus_tag=BVI2075_120081 NZ_CAJZAL010000024.1 Protein Homology CDS 89171 93688 . + 0 ID=cds-WP_224056176.1;Parent=gene-LDO38_RS02895;Dbxref=GenBank:WP_224056176.1;Name=WP_224056176.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882031.1;locus_tag=LDO38_RS02895;product=DEAD/DEAH box helicase;protein_id=WP_224056176.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 93820 95094 . + . ID=gene-LDO38_RS02900;Name=LDO38_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02900;old_locus_tag=BVI2075_120082 NZ_CAJZAL010000024.1 Protein Homology CDS 93820 95094 . + 0 ID=cds-WP_175948897.1;Parent=gene-LDO38_RS02900;Dbxref=GenBank:WP_175948897.1;Name=WP_175948897.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725033.1;locus_tag=LDO38_RS02900;product=APC family permease;protein_id=WP_175948897.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 95316 96302 . - . ID=gene-LDO38_RS02905;Name=pcaQ;gbkey=Gene;gene=pcaQ;gene_biotype=protein_coding;locus_tag=LDO38_RS02905;old_locus_tag=BVI2075_120083 NZ_CAJZAL010000024.1 Protein Homology CDS 95316 96302 . - 0 ID=cds-WP_059474286.1;Parent=gene-LDO38_RS02905;Dbxref=GenBank:WP_059474286.1;Name=WP_059474286.1;Ontology_term=GO:0019619,GO:0045893,GO:0003677;gbkey=CDS;gene=pcaQ;go_function=DNA binding|0003677||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA,positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495024.1;locus_tag=LDO38_RS02905;product=pca operon transcription factor PcaQ;protein_id=WP_059474286.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 96381 97118 . - . ID=gene-LDO38_RS02910;Name=LDO38_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02910;old_locus_tag=BVI2075_120084 NZ_CAJZAL010000024.1 Protein Homology CDS 96381 97118 . - 0 ID=cds-WP_011882028.1;Parent=gene-LDO38_RS02910;Dbxref=GenBank:WP_011882028.1;Name=WP_011882028.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882028.1;locus_tag=LDO38_RS02910;product=helix-turn-helix domain-containing protein;protein_id=WP_011882028.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 97239 97802 . + . ID=gene-LDO38_RS02915;Name=LDO38_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02915;old_locus_tag=BVI2075_120085 NZ_CAJZAL010000024.1 Protein Homology CDS 97239 97802 . + 0 ID=cds-WP_034193866.1;Parent=gene-LDO38_RS02915;Dbxref=GenBank:WP_034193866.1;Name=WP_034193866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751196.1;locus_tag=LDO38_RS02915;product=YiiX/YebB-like N1pC/P60 family cysteine hydrolase;protein_id=WP_034193866.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 98090 98797 . + . ID=gene-LDO38_RS02920;Name=pcaH;gbkey=Gene;gene=pcaH;gene_biotype=protein_coding;locus_tag=LDO38_RS02920;old_locus_tag=BVI2075_120086 NZ_CAJZAL010000024.1 Protein Homology CDS 98090 98797 . + 0 ID=cds-WP_014725036.1;Parent=gene-LDO38_RS02920;Dbxref=GenBank:WP_014725036.1;Name=WP_014725036.1;Ontology_term=GO:0046278,GO:0005506,GO:0018578;gbkey=CDS;gene=pcaH;go_function=iron ion binding|0005506||IEA,protocatechuate 3%2C4-dioxygenase activity|0018578||IEA;go_process=3%2C4-dihydroxybenzoate metabolic process|0046278||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725036.1;locus_tag=LDO38_RS02920;product=protocatechuate 3%2C4-dioxygenase subunit beta;protein_id=WP_014725036.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 98801 99394 . + . ID=gene-LDO38_RS02925;Name=pcaG;gbkey=Gene;gene=pcaG;gene_biotype=protein_coding;locus_tag=LDO38_RS02925;old_locus_tag=BVI2075_120087 NZ_CAJZAL010000024.1 Protein Homology CDS 98801 99394 . + 0 ID=cds-WP_069246509.1;Parent=gene-LDO38_RS02925;Dbxref=GenBank:WP_069246509.1;Name=WP_069246509.1;Ontology_term=GO:0046278,GO:0005506,GO:0018578;gbkey=CDS;gene=pcaG;go_function=iron ion binding|0005506||IEA,protocatechuate 3%2C4-dioxygenase activity|0018578||IEA;go_process=3%2C4-dihydroxybenzoate metabolic process|0046278||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899603.1;locus_tag=LDO38_RS02925;product=protocatechuate 3%2C4-dioxygenase subunit alpha;protein_id=WP_069246509.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 99655 100098 . - . ID=gene-LDO38_RS02930;Name=LDO38_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02930;old_locus_tag=BVI2075_120088 NZ_CAJZAL010000024.1 GeneMarkS-2+ CDS 99655 100098 . - 0 ID=cds-WP_166677064.1;Parent=gene-LDO38_RS02930;Dbxref=GenBank:WP_166677064.1;Name=WP_166677064.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS02930;product=hypothetical protein;protein_id=WP_166677064.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 100103 100915 . + . ID=gene-LDO38_RS02935;Name=bla;gbkey=Gene;gene=bla;gene_biotype=protein_coding;locus_tag=LDO38_RS02935;old_locus_tag=BVI2075_120089 NZ_CAJZAL010000024.1 Protein Homology CDS 100103 100915 . + 0 ID=cds-WP_059474283.1;Parent=gene-LDO38_RS02935;Dbxref=GenBank:WP_059474283.1;Name=WP_059474283.1;Ontology_term=GO:0030655,GO:0046677,GO:0008800;gbkey=CDS;gene=bla;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882024.1;locus_tag=LDO38_RS02935;product=class A beta-lactamase;protein_id=WP_059474283.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 100912 102114 . + . ID=gene-LDO38_RS02940;Name=LDO38_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02940;old_locus_tag=BVI2075_120090 NZ_CAJZAL010000024.1 Protein Homology CDS 100912 102114 . + 0 ID=cds-WP_059474326.1;Parent=gene-LDO38_RS02940;Dbxref=GenBank:WP_059474326.1;Name=WP_059474326.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725038.1;locus_tag=LDO38_RS02940;product=acyltransferase family protein;protein_id=WP_059474326.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 102542 103861 . + . ID=gene-LDO38_RS02945;Name=LDO38_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02945;old_locus_tag=BVI2075_120092 NZ_CAJZAL010000024.1 Protein Homology CDS 102542 103861 . + 0 ID=cds-WP_059461106.1;Parent=gene-LDO38_RS02945;Dbxref=GenBank:WP_059461106.1;Name=WP_059461106.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725040.1;locus_tag=LDO38_RS02945;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_059461106.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 103871 104713 . + . ID=gene-LDO38_RS02950;Name=LDO38_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02950;old_locus_tag=BVI2075_120093 NZ_CAJZAL010000024.1 Protein Homology CDS 103871 104713 . + 0 ID=cds-WP_014725041.1;Parent=gene-LDO38_RS02950;Dbxref=GenBank:WP_014725041.1;Name=WP_014725041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725041.1;locus_tag=LDO38_RS02950;product=VOC family protein;protein_id=WP_014725041.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 104785 105744 . - . ID=gene-LDO38_RS02955;Name=LDO38_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02955;old_locus_tag=BVI2075_120094 NZ_CAJZAL010000024.1 Protein Homology CDS 104785 105744 . - 0 ID=cds-WP_011882020.1;Parent=gene-LDO38_RS02955;Dbxref=GenBank:WP_011882020.1;Name=WP_011882020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882020.1;locus_tag=LDO38_RS02955;product=LysR family transcriptional regulator;protein_id=WP_011882020.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 105864 107075 . + . ID=gene-LDO38_RS02960;Name=LDO38_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02960;old_locus_tag=BVI2075_120095 NZ_CAJZAL010000024.1 Protein Homology CDS 105864 107075 . + 0 ID=cds-WP_059462559.1;Parent=gene-LDO38_RS02960;Dbxref=GenBank:WP_059462559.1;Name=WP_059462559.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725043.1;locus_tag=LDO38_RS02960;product=MFS transporter;protein_id=WP_059462559.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 107338 107766 . + . ID=gene-LDO38_RS02965;Name=LDO38_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02965;old_locus_tag=BVI2075_120096 NZ_CAJZAL010000024.1 Protein Homology CDS 107338 107766 . + 0 ID=cds-WP_059735705.1;Parent=gene-LDO38_RS02965;Dbxref=GenBank:WP_059735705.1;Name=WP_059735705.1;Ontology_term=GO:0030638;gbkey=CDS;go_process=polyketide metabolic process|0030638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882018.1;locus_tag=LDO38_RS02965;product=ester cyclase;protein_id=WP_059735705.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 107763 108215 . + . ID=gene-LDO38_RS02970;Name=LDO38_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02970;old_locus_tag=BVI2075_120097 NZ_CAJZAL010000024.1 Protein Homology CDS 107763 108215 . + 0 ID=cds-WP_059474280.1;Parent=gene-LDO38_RS02970;Dbxref=GenBank:WP_059474280.1;Name=WP_059474280.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882017.1;locus_tag=LDO38_RS02970;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_059474280.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 108809 109963 . + . ID=gene-LDO38_RS02975;Name=hpnI;gbkey=Gene;gene=hpnI;gene_biotype=protein_coding;locus_tag=LDO38_RS02975;old_locus_tag=BVI2075_120099 NZ_CAJZAL010000024.1 Protein Homology CDS 108809 109963 . + 0 ID=cds-WP_059462555.1;Parent=gene-LDO38_RS02975;Dbxref=GenBank:WP_059462555.1;Name=WP_059462555.1;Ontology_term=GO:0016757;gbkey=CDS;gene=hpnI;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725045.1;locus_tag=LDO38_RS02975;product=bacteriohopanetetrol glucosamine biosynthesis glycosyltransferase HpnI;protein_id=WP_059462555.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 110184 111158 . + . ID=gene-LDO38_RS02980;Name=LDO38_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02980;old_locus_tag=BVI2075_120101 NZ_CAJZAL010000024.1 Protein Homology CDS 110184 111158 . + 0 ID=cds-WP_034193859.1;Parent=gene-LDO38_RS02980;Dbxref=GenBank:WP_034193859.1;Name=WP_034193859.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF015651.6;locus_tag=LDO38_RS02980;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=WP_034193859.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 111557 111787 . - . ID=gene-LDO38_RS02985;Name=LDO38_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02985;old_locus_tag=BVI2075_120102 NZ_CAJZAL010000024.1 Protein Homology CDS 111557 111787 . - 0 ID=cds-WP_124260238.1;Parent=gene-LDO38_RS02985;Dbxref=GenBank:WP_124260238.1;Name=WP_124260238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017775810.1;locus_tag=LDO38_RS02985;product=hypothetical protein;protein_id=WP_124260238.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 112203 112964 . - . ID=gene-LDO38_RS02990;Name=LDO38_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02990;old_locus_tag=BVI2075_120104 NZ_CAJZAL010000024.1 Protein Homology CDS 112203 112964 . - 0 ID=cds-WP_011882013.1;Parent=gene-LDO38_RS02990;Dbxref=GenBank:WP_011882013.1;Name=WP_011882013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403789.1;locus_tag=LDO38_RS02990;product=hypothetical protein;protein_id=WP_011882013.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 113118 113897 . - . ID=gene-LDO38_RS02995;Name=LDO38_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS02995;old_locus_tag=BVI2075_120105 NZ_CAJZAL010000024.1 Protein Homology CDS 113118 113897 . - 0 ID=cds-WP_041494159.1;Parent=gene-LDO38_RS02995;Dbxref=GenBank:WP_041494159.1;Name=WP_041494159.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882012.1;locus_tag=LDO38_RS02995;product=AraC family transcriptional regulator;protein_id=WP_041494159.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 114040 114810 . + . ID=gene-LDO38_RS03000;Name=LDO38_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03000;old_locus_tag=BVI2075_120106 NZ_CAJZAL010000024.1 Protein Homology CDS 114040 114810 . + 0 ID=cds-WP_041494160.1;Parent=gene-LDO38_RS03000;Dbxref=GenBank:WP_041494160.1;Name=WP_041494160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882011.1;locus_tag=LDO38_RS03000;product=alpha/beta fold hydrolase;protein_id=WP_041494160.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 114846 115673 . - . ID=gene-LDO38_RS03005;Name=LDO38_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03005;old_locus_tag=BVI2075_120107 NZ_CAJZAL010000024.1 Protein Homology CDS 114846 115673 . - 0 ID=cds-WP_011882010.1;Parent=gene-LDO38_RS03005;Dbxref=GenBank:WP_011882010.1;Name=WP_011882010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495030.1;locus_tag=LDO38_RS03005;product=M55 family metallopeptidase;protein_id=WP_011882010.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 115670 116770 . - . ID=gene-LDO38_RS03010;Name=LDO38_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03010;old_locus_tag=BVI2075_120108 NZ_CAJZAL010000024.1 Protein Homology CDS 115670 116770 . - 0 ID=cds-WP_045578088.1;Parent=gene-LDO38_RS03010;Dbxref=GenBank:WP_045578088.1;Name=WP_045578088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882009.1;locus_tag=LDO38_RS03010;product=P1 family peptidase;protein_id=WP_045578088.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 116770 117663 . - . ID=gene-LDO38_RS03015;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=LDO38_RS03015;old_locus_tag=BVI2075_120109 NZ_CAJZAL010000024.1 Protein Homology CDS 116770 117663 . - 0 ID=cds-WP_011882008.1;Parent=gene-LDO38_RS03015;Dbxref=GenBank:WP_011882008.1;Name=WP_011882008.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765762.1;locus_tag=LDO38_RS03015;product=glutathione ABC transporter permease GsiD;protein_id=WP_011882008.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 117671 118591 . - . ID=gene-LDO38_RS03020;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=LDO38_RS03020;old_locus_tag=BVI2075_120110 NZ_CAJZAL010000024.1 Protein Homology CDS 117671 118591 . - 0 ID=cds-WP_011882007.1;Parent=gene-LDO38_RS03020;Dbxref=GenBank:WP_011882007.1;Name=WP_011882007.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765761.1;locus_tag=LDO38_RS03020;product=glutathione ABC transporter permease GsiC;protein_id=WP_011882007.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 118668 120230 . - . ID=gene-LDO38_RS03025;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=LDO38_RS03025;old_locus_tag=BVI2075_120112 NZ_CAJZAL010000024.1 Protein Homology CDS 118668 120230 . - 0 ID=cds-WP_069246510.1;Parent=gene-LDO38_RS03025;Dbxref=GenBank:WP_069246510.1;Name=WP_069246510.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603960.1;locus_tag=LDO38_RS03025;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_069246510.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 120396 122360 . - . ID=gene-LDO38_RS03030;Name=LDO38_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03030;old_locus_tag=BVI2075_120113 NZ_CAJZAL010000024.1 Protein Homology CDS 120396 122360 . - 0 ID=cds-WP_059622786.1;Parent=gene-LDO38_RS03030;Dbxref=GenBank:WP_059622786.1;Name=WP_059622786.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495033.1;locus_tag=LDO38_RS03030;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_059622786.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 122389 123393 . - . ID=gene-LDO38_RS03035;Name=LDO38_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03035;old_locus_tag=BVI2075_120114 NZ_CAJZAL010000024.1 Protein Homology CDS 122389 123393 . - 0 ID=cds-WP_069246511.1;Parent=gene-LDO38_RS03035;Dbxref=GenBank:WP_069246511.1;Name=WP_069246511.1;Ontology_term=GO:0006508,GO:0004067,GO:0008798;gbkey=CDS;go_function=asparaginase activity|0004067||IEA,beta-aspartyl-peptidase activity|0008798||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482631.1;locus_tag=LDO38_RS03035;product=isoaspartyl peptidase/L-asparaginase family protein;protein_id=WP_069246511.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 123390 124334 . - . ID=gene-LDO38_RS03040;Name=LDO38_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03040;old_locus_tag=BVI2075_120115 NZ_CAJZAL010000024.1 Protein Homology CDS 123390 124334 . - 0 ID=cds-WP_011882003.1;Parent=gene-LDO38_RS03040;Dbxref=GenBank:WP_011882003.1;Name=WP_011882003.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482638.1;locus_tag=LDO38_RS03040;product=MurR/RpiR family transcriptional regulator;protein_id=WP_011882003.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 124430 124676 . - . ID=gene-LDO38_RS30265;Name=LDO38_RS30265;end_range=124676,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30265;partial=true NZ_CAJZAL010000024.1 GeneMarkS-2+ CDS 124430 124676 . - 1 ID=cds-WP_435520880.1;Parent=gene-LDO38_RS30265;Dbxref=GenBank:WP_435520880.1;Name=WP_435520880.1;end_range=124676,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30265;partial=true;product=hypothetical protein;protein_id=WP_435520880.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 124836 127281 . - . ID=gene-LDO38_RS30270;Name=LDO38_RS30270;end_range=127281,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30270;old_locus_tag=BVI2075_120116;partial=true NZ_CAJZAL010000024.1 Protein Homology CDS 124836 127281 . - 1 ID=cds-WP_435520881.1;Parent=gene-LDO38_RS30270;Dbxref=GenBank:WP_435520881.1;Name=WP_435520881.1;Ontology_term=GO:0046903,GO:0015474,GO:0016020;end_range=127281,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=autotransporter activity|0015474||IEA;go_process=secretion|0046903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882002.1;locus_tag=LDO38_RS30270;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_435520881.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq pseudogene 127292 129428 . - . ID=gene-LDO38_RS30275;Name=LDO38_RS30275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30275;old_locus_tag=BVI2075_120118;partial=true;pseudo=true;start_range=.,127292 NZ_CAJZAL010000024.1 Protein Homology CDS 127292 129428 . - 0 ID=cds-LDO38_RS30275;Parent=gene-LDO38_RS30275;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882002.1;locus_tag=LDO38_RS30275;partial=true;product=autotransporter-associated beta strand repeat-containing protein;pseudo=true;start_range=.,127292;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 130097 130408 . + . ID=gene-LDO38_RS03050;Name=LDO38_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03050;old_locus_tag=BVI2075_120120 NZ_CAJZAL010000024.1 Protein Homology CDS 130097 130408 . + 0 ID=cds-WP_011882001.1;Parent=gene-LDO38_RS03050;Dbxref=GenBank:WP_011882001.1;Name=WP_011882001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882001.1;locus_tag=LDO38_RS03050;product=hypothetical protein;protein_id=WP_011882001.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 130656 131504 . - . ID=gene-LDO38_RS03055;Name=LDO38_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03055;old_locus_tag=BVI2075_120122 NZ_CAJZAL010000024.1 Protein Homology CDS 130656 131504 . - 0 ID=cds-WP_034193878.1;Parent=gene-LDO38_RS03055;Dbxref=GenBank:WP_034193878.1;Name=WP_034193878.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547910.1;locus_tag=LDO38_RS03055;product=class I SAM-dependent methyltransferase;protein_id=WP_034193878.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 131651 133111 . + . ID=gene-LDO38_RS03060;Name=LDO38_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03060;old_locus_tag=BVI2075_120123 NZ_CAJZAL010000024.1 Protein Homology CDS 131651 133111 . + 0 ID=cds-WP_045578092.1;Parent=gene-LDO38_RS03060;Dbxref=GenBank:WP_045578092.1;Name=WP_045578092.1;Ontology_term=GO:0016787,GO:0042578,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488720.1;locus_tag=LDO38_RS03060;product=metallophosphoesterase family protein;protein_id=WP_045578092.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 133276 134613 . + . ID=gene-LDO38_RS03065;Name=LDO38_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03065;old_locus_tag=BVI2075_120124 NZ_CAJZAL010000024.1 Protein Homology CDS 133276 134613 . + 0 ID=cds-WP_059567755.1;Parent=gene-LDO38_RS03065;Dbxref=GenBank:WP_059567755.1;Name=WP_059567755.1;Ontology_term=GO:0004130,GO:0016491,GO:0020037;gbkey=CDS;go_function=cytochrome-c peroxidase activity|0004130||IEA,oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725061.1;locus_tag=LDO38_RS03065;product=cytochrome-c peroxidase;protein_id=WP_059567755.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 135083 135382 . + . ID=gene-LDO38_RS03070;Name=LDO38_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03070;old_locus_tag=BVI2075_120125 NZ_CAJZAL010000024.1 Protein Homology CDS 135083 135382 . + 0 ID=cds-WP_011881997.1;Parent=gene-LDO38_RS03070;Dbxref=GenBank:WP_011881997.1;Name=WP_011881997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881997.1;locus_tag=LDO38_RS03070;product=hypothetical protein;protein_id=WP_011881997.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 135524 137008 . - . ID=gene-LDO38_RS03075;Name=LDO38_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03075;old_locus_tag=BVI2075_120126 NZ_CAJZAL010000024.1 Protein Homology CDS 135524 137008 . - 0 ID=cds-WP_085954507.1;Parent=gene-LDO38_RS03075;Dbxref=GenBank:WP_085954507.1;Name=WP_085954507.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495045.1;locus_tag=LDO38_RS03075;product=PLP-dependent aminotransferase family protein;protein_id=WP_085954507.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 137212 137562 . + . ID=gene-LDO38_RS03080;Name=LDO38_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03080;old_locus_tag=BVI2075_120127 NZ_CAJZAL010000024.1 Protein Homology CDS 137212 137562 . + 0 ID=cds-WP_069246512.1;Parent=gene-LDO38_RS03080;Dbxref=GenBank:WP_069246512.1;Name=WP_069246512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658579.1;locus_tag=LDO38_RS03080;product=hypothetical protein;protein_id=WP_069246512.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 137752 138171 . - . ID=gene-LDO38_RS03085;Name=LDO38_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03085;old_locus_tag=BVI2075_120128 NZ_CAJZAL010000024.1 Protein Homology CDS 137752 138171 . - 0 ID=cds-WP_034193852.1;Parent=gene-LDO38_RS03085;Dbxref=GenBank:WP_034193852.1;Name=WP_034193852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725064.1;locus_tag=LDO38_RS03085;product=DUF6691 family protein;protein_id=WP_034193852.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 138173 138607 . - . ID=gene-LDO38_RS03090;Name=LDO38_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03090;old_locus_tag=BVI2075_120129 NZ_CAJZAL010000024.1 Protein Homology CDS 138173 138607 . - 0 ID=cds-WP_014725065.1;Parent=gene-LDO38_RS03090;Dbxref=GenBank:WP_014725065.1;Name=WP_014725065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751220.1;locus_tag=LDO38_RS03090;product=YeeE/YedE family protein;protein_id=WP_014725065.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 138597 138947 . - . ID=gene-LDO38_RS03095;Name=LDO38_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03095;old_locus_tag=BVI2075_120130 NZ_CAJZAL010000024.1 Protein Homology CDS 138597 138947 . - 0 ID=cds-WP_059668733.1;Parent=gene-LDO38_RS03095;Dbxref=GenBank:WP_059668733.1;Name=WP_059668733.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881992.1;locus_tag=LDO38_RS03095;product=ArsR/SmtB family transcription factor;protein_id=WP_059668733.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 139112 140386 . - . ID=gene-LDO38_RS03100;Name=LDO38_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03100;old_locus_tag=BVI2075_120131 NZ_CAJZAL010000024.1 Protein Homology CDS 139112 140386 . - 0 ID=cds-WP_069246513.1;Parent=gene-LDO38_RS03100;Dbxref=GenBank:WP_069246513.1;Name=WP_069246513.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881991.1;locus_tag=LDO38_RS03100;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_069246513.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 140383 140616 . - . ID=gene-LDO38_RS03105;Name=LDO38_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03105;old_locus_tag=BVI2075_120132 NZ_CAJZAL010000024.1 Protein Homology CDS 140383 140616 . - 0 ID=cds-WP_011658575.1;Parent=gene-LDO38_RS03105;Dbxref=GenBank:WP_011658575.1;Name=WP_011658575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028982.1;locus_tag=LDO38_RS03105;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_011658575.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 140613 141743 . - . ID=gene-LDO38_RS03110;Name=LDO38_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03110;old_locus_tag=BVI2075_120133 NZ_CAJZAL010000024.1 Protein Homology CDS 140613 141743 . - 0 ID=cds-WP_059734830.1;Parent=gene-LDO38_RS03110;Dbxref=GenBank:WP_059734830.1;Name=WP_059734830.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725067.1;locus_tag=LDO38_RS03110;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_059734830.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 141740 142672 . - . ID=gene-LDO38_RS03115;Name=LDO38_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03115;old_locus_tag=BVI2075_120134 NZ_CAJZAL010000024.1 Protein Homology CDS 141740 142672 . - 0 ID=cds-WP_034193876.1;Parent=gene-LDO38_RS03115;Dbxref=GenBank:WP_034193876.1;Name=WP_034193876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028984.1;locus_tag=LDO38_RS03115;product=4-hydroxyproline epimerase;protein_id=WP_034193876.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 143185 143463 . + . ID=gene-LDO38_RS03120;Name=LDO38_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03120;old_locus_tag=BVI2075_120136 NZ_CAJZAL010000024.1 GeneMarkS-2+ CDS 143185 143463 . + 0 ID=cds-WP_014725069.1;Parent=gene-LDO38_RS03120;Dbxref=GenBank:WP_014725069.1;Name=WP_014725069.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS03120;product=hypothetical protein;protein_id=WP_014725069.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 143546 145138 . + . ID=gene-LDO38_RS03125;Name=LDO38_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03125;old_locus_tag=BVI2075_120135 NZ_CAJZAL010000024.1 Protein Homology CDS 143546 145138 . + 0 ID=cds-WP_059897351.1;Parent=gene-LDO38_RS03125;Dbxref=GenBank:WP_059897351.1;Name=WP_059897351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754884.1;locus_tag=LDO38_RS03125;product=aldehyde dehydrogenase (NADP(+));protein_id=WP_059897351.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 145131 146153 . + . ID=gene-LDO38_RS03130;Name=LDO38_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03130;old_locus_tag=BVI2075_120137 NZ_CAJZAL010000024.1 Protein Homology CDS 145131 146153 . + 0 ID=cds-WP_034193846.1;Parent=gene-LDO38_RS03130;Dbxref=GenBank:WP_034193846.1;Name=WP_034193846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754883.1;locus_tag=LDO38_RS03130;product=Ldh family oxidoreductase;protein_id=WP_034193846.1;transl_table=11 NZ_CAJZAL010000024.1 RefSeq gene 146402 148261 . + . ID=gene-LDO38_RS03135;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=LDO38_RS03135;old_locus_tag=BVI2075_120138 NZ_CAJZAL010000024.1 Protein Homology CDS 146402 148261 . + 0 ID=cds-WP_069224586.1;Parent=gene-LDO38_RS03135;Dbxref=GenBank:WP_069224586.1;Name=WP_069224586.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013952014.1;locus_tag=LDO38_RS03135;product=dihydroxy-acid dehydratase;protein_id=WP_069224586.1;transl_table=11 ##sequence-region NZ_CAJZAL010000025.1 1 6850 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000025.1 RefSeq region 1 6850 . + . ID=NZ_CAJZAL010000025.1:1..6850;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_120 NZ_CAJZAL010000025.1 RefSeq gene 1 413 . - . ID=gene-LDO38_RS30280;Name=LDO38_RS30280;end_range=413,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30280;partial=true;start_range=.,1 NZ_CAJZAL010000025.1 Protein Homology CDS 1 413 . - 0 ID=cds-WP_435520882.1;Parent=gene-LDO38_RS30280;Dbxref=GenBank:WP_435520882.1;Name=WP_435520882.1;end_range=413,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339495.1;locus_tag=LDO38_RS30280;partial=true;product=TonB-dependent receptor domain-containing protein;protein_id=WP_435520882.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000025.1 RefSeq gene 424 1899 . - . ID=gene-LDO38_RS03145;Name=LDO38_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03145;old_locus_tag=BVI2075_1200002;partial=true;start_range=.,424 NZ_CAJZAL010000025.1 Protein Homology CDS 424 1899 . - 0 ID=cds-WP_435520883.1;Parent=gene-LDO38_RS03145;Dbxref=GenBank:WP_435520883.1;Name=WP_435520883.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726244.1;locus_tag=LDO38_RS03145;partial=true;product=TonB-dependent receptor;protein_id=WP_435520883.1;start_range=.,424;transl_table=11 NZ_CAJZAL010000025.1 RefSeq gene 2719 4446 . + . ID=gene-LDO38_RS03155;Name=LDO38_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03155;old_locus_tag=BVI2075_1200006 NZ_CAJZAL010000025.1 Protein Homology CDS 2719 4446 . + 0 ID=cds-WP_011880613.1;Parent=gene-LDO38_RS03155;Dbxref=GenBank:WP_011880613.1;Name=WP_011880613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372240.1;locus_tag=LDO38_RS03155;product=methanol/ethanol family PQQ-dependent dehydrogenase;protein_id=WP_011880613.1;transl_table=11 NZ_CAJZAL010000025.1 RefSeq gene 4530 5798 . + . ID=gene-LDO38_RS03160;Name=LDO38_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03160;old_locus_tag=BVI2075_1200007 NZ_CAJZAL010000025.1 Protein Homology CDS 4530 5798 . + 0 ID=cds-WP_045579883.1;Parent=gene-LDO38_RS03160;Dbxref=GenBank:WP_045579883.1;Name=WP_045579883.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399101.1;locus_tag=LDO38_RS03160;product=c-type cytochrome;protein_id=WP_045579883.1;transl_table=11 NZ_CAJZAL010000025.1 RefSeq gene 5875 6186 . + . ID=gene-LDO38_RS03165;Name=LDO38_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03165;old_locus_tag=BVI2075_1200008 NZ_CAJZAL010000025.1 Protein Homology CDS 5875 6186 . + 0 ID=cds-WP_011880615.1;Parent=gene-LDO38_RS03165;Dbxref=GenBank:WP_011880615.1;Name=WP_011880615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880615.1;locus_tag=LDO38_RS03165;product=high-potential iron-sulfur protein;protein_id=WP_011880615.1;transl_table=11 NZ_CAJZAL010000025.1 RefSeq gene 6170 6850 . + . ID=gene-LDO38_RS03170;Name=LDO38_RS03170;end_range=6850,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03170;partial=true NZ_CAJZAL010000025.1 Protein Homology CDS 6170 6850 . + 0 ID=cds-WP_290371168.1;Parent=gene-LDO38_RS03170;Dbxref=GenBank:WP_290371168.1;Name=WP_290371168.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;end_range=6850,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880616.1;locus_tag=LDO38_RS03170;partial=true;product=sigma-70 factor domain-containing protein;protein_id=WP_290371168.1;transl_table=11 ##sequence-region NZ_CAJZAL010000026.1 1 29998 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000026.1 RefSeq region 1 29998 . + . ID=NZ_CAJZAL010000026.1:1..29998;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_121 NZ_CAJZAL010000026.1 RefSeq gene 1 1279 . + . ID=gene-LDO38_RS03175;Name=LDO38_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03175;old_locus_tag=BVI2075_1210002;partial=true;start_range=.,1 NZ_CAJZAL010000026.1 Protein Homology CDS 1 1279 . + 1 ID=cds-WP_224056177.1;Parent=gene-LDO38_RS03175;Dbxref=GenBank:WP_224056177.1;Name=WP_224056177.1;Ontology_term=GO:0072488,GO:0008519,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364779.1;locus_tag=LDO38_RS03175;partial=true;product=ammonium transporter;protein_id=WP_224056177.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 1523 2812 . + . ID=gene-LDO38_RS03180;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=LDO38_RS03180;old_locus_tag=BVI2075_1210003 NZ_CAJZAL010000026.1 Protein Homology CDS 1523 2812 . + 0 ID=cds-WP_014723704.1;Parent=gene-LDO38_RS03180;Dbxref=GenBank:WP_014723704.1;Name=WP_014723704.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013337902.1;locus_tag=LDO38_RS03180;product=glutamate--cysteine ligase;protein_id=WP_014723704.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 2838 3794 . + . ID=gene-LDO38_RS03185;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=LDO38_RS03185;old_locus_tag=BVI2075_1210004 NZ_CAJZAL010000026.1 Protein Homology CDS 2838 3794 . + 0 ID=cds-WP_011886118.1;Parent=gene-LDO38_RS03185;Dbxref=GenBank:WP_011886118.1;Name=WP_011886118.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090583.1;locus_tag=LDO38_RS03185;product=glutathione synthase;protein_id=WP_011886118.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 4006 4476 . + . ID=gene-LDO38_RS03190;Name=LDO38_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03190;old_locus_tag=BVI2075_1210005 NZ_CAJZAL010000026.1 Protein Homology CDS 4006 4476 . + 0 ID=cds-WP_011886117.1;Parent=gene-LDO38_RS03190;Dbxref=GenBank:WP_011886117.1;Name=WP_011886117.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198014.1;locus_tag=LDO38_RS03190;product=PTS sugar transporter subunit IIA;protein_id=WP_011886117.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 4552 4821 . + . ID=gene-LDO38_RS03195;Name=LDO38_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03195;old_locus_tag=BVI2075_1210006 NZ_CAJZAL010000026.1 Protein Homology CDS 4552 4821 . + 0 ID=cds-WP_006477716.1;Parent=gene-LDO38_RS03195;Dbxref=GenBank:WP_006477716.1;Name=WP_006477716.1;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010101417.1;locus_tag=LDO38_RS03195;product=HPr family phosphocarrier protein;protein_id=WP_006477716.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 5021 6793 . + . ID=gene-LDO38_RS03200;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=LDO38_RS03200;old_locus_tag=BVI2075_1210007 NZ_CAJZAL010000026.1 Protein Homology CDS 5021 6793 . + 0 ID=cds-WP_014723702.1;Parent=gene-LDO38_RS03200;Dbxref=GenBank:WP_014723702.1;Name=WP_014723702.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407042.1;locus_tag=LDO38_RS03200;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_014723702.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 6865 7617 . - . ID=gene-LDO38_RS03205;Name=LDO38_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03205;old_locus_tag=BVI2075_1210008 NZ_CAJZAL010000026.1 Protein Homology CDS 6865 7617 . - 0 ID=cds-WP_011886115.1;Parent=gene-LDO38_RS03205;Dbxref=GenBank:WP_011886115.1;Name=WP_011886115.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329276.1;locus_tag=LDO38_RS03205;product=HesA/MoeB/ThiF family protein;protein_id=WP_011886115.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 7745 9286 . - . ID=gene-LDO38_RS03210;Name=LDO38_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03210;old_locus_tag=BVI2075_1210009 NZ_CAJZAL010000026.1 Protein Homology CDS 7745 9286 . - 0 ID=cds-WP_011886114.1;Parent=gene-LDO38_RS03210;Dbxref=GenBank:WP_011886114.1;Name=WP_011886114.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398184.1;locus_tag=LDO38_RS03210;product=S41 family peptidase;protein_id=WP_011886114.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 9535 10281 . - . ID=gene-LDO38_RS03215;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=LDO38_RS03215;old_locus_tag=BVI2075_1210010 NZ_CAJZAL010000026.1 Protein Homology CDS 9535 10281 . - 0 ID=cds-WP_011886113.1;Parent=gene-LDO38_RS03215;Dbxref=GenBank:WP_011886113.1;Name=WP_011886113.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658011.1;locus_tag=LDO38_RS03215;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_011886113.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 10427 10849 . + . ID=gene-LDO38_RS03220;Name=LDO38_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03220;old_locus_tag=BVI2075_1210011 NZ_CAJZAL010000026.1 Protein Homology CDS 10427 10849 . + 0 ID=cds-WP_011886112.1;Parent=gene-LDO38_RS03220;Dbxref=GenBank:WP_011886112.1;Name=WP_011886112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723700.1;locus_tag=LDO38_RS03220;product=rhodanese-like domain-containing protein;protein_id=WP_011886112.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 10846 11106 . + . ID=gene-LDO38_RS03225;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=LDO38_RS03225;old_locus_tag=BVI2075_1210012 NZ_CAJZAL010000026.1 Protein Homology CDS 10846 11106 . + 0 ID=cds-WP_059475378.1;Parent=gene-LDO38_RS03225;Dbxref=GenBank:WP_059475378.1;Name=WP_059475378.1;Ontology_term=GO:0045454;gbkey=CDS;gene=grxC;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200200.1;locus_tag=LDO38_RS03225;product=glutaredoxin 3;protein_id=WP_059475378.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 11215 11694 . + . ID=gene-LDO38_RS03230;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=LDO38_RS03230;old_locus_tag=BVI2075_1210013 NZ_CAJZAL010000026.1 Protein Homology CDS 11215 11694 . + 0 ID=cds-WP_011658008.1;Parent=gene-LDO38_RS03230;Dbxref=GenBank:WP_011658008.1;Name=WP_011658008.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658008.1;locus_tag=LDO38_RS03230;product=protein-export chaperone SecB;protein_id=WP_011658008.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 11721 12719 . + . ID=gene-LDO38_RS03235;Name=LDO38_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03235;old_locus_tag=BVI2075_1210014 NZ_CAJZAL010000026.1 Protein Homology CDS 11721 12719 . + 0 ID=cds-WP_034192543.1;Parent=gene-LDO38_RS03235;Dbxref=GenBank:WP_034192543.1;Name=WP_034192543.1;Ontology_term=GO:0046167,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate biosynthetic process|0046167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546282.1;locus_tag=LDO38_RS03235;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_034192543.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 12841 13401 . + . ID=gene-LDO38_RS03240;Name=LDO38_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03240;old_locus_tag=BVI2075_1210015 NZ_CAJZAL010000026.1 Protein Homology CDS 12841 13401 . + 0 ID=cds-WP_059461207.1;Parent=gene-LDO38_RS03240;Dbxref=GenBank:WP_059461207.1;Name=WP_059461207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007734990.1;locus_tag=LDO38_RS03240;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_059461207.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 13374 13844 . - . ID=gene-LDO38_RS03245;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=LDO38_RS03245;old_locus_tag=BVI2075_1210016 NZ_CAJZAL010000026.1 Protein Homology CDS 13374 13844 . - 0 ID=cds-WP_014723697.1;Parent=gene-LDO38_RS03245;Dbxref=GenBank:WP_014723697.1;Name=WP_014723697.1;Ontology_term=GO:0006400,GO:0008175;gbkey=CDS;gene=trmL;go_function=tRNA methyltransferase activity|0008175||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763321.1;locus_tag=LDO38_RS03245;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_014723697.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 13962 14774 . - . ID=gene-LDO38_RS03250;Name=LDO38_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03250;old_locus_tag=BVI2075_1210017 NZ_CAJZAL010000026.1 Protein Homology CDS 13962 14774 . - 0 ID=cds-WP_069246332.1;Parent=gene-LDO38_RS03250;Dbxref=GenBank:WP_069246332.1;Name=WP_069246332.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212659.1;locus_tag=LDO38_RS03250;product=ComF family protein;protein_id=WP_069246332.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 14857 15822 . + . ID=gene-LDO38_RS03255;Name=LDO38_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03255;old_locus_tag=BVI2075_1210018 NZ_CAJZAL010000026.1 Protein Homology CDS 14857 15822 . + 0 ID=cds-WP_041493895.1;Parent=gene-LDO38_RS03255;Dbxref=GenBank:WP_041493895.1;Name=WP_041493895.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762484.1;locus_tag=LDO38_RS03255;product=methyltransferase domain-containing protein;protein_id=WP_041493895.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 16018 16542 . + . ID=gene-LDO38_RS03260;Name=LDO38_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03260;old_locus_tag=BVI2075_1210019 NZ_CAJZAL010000026.1 Protein Homology CDS 16018 16542 . + 0 ID=cds-WP_045578759.1;Parent=gene-LDO38_RS03260;Dbxref=GenBank:WP_045578759.1;Name=WP_045578759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486400.1;locus_tag=LDO38_RS03260;product=DUF2244 domain-containing protein;protein_id=WP_045578759.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 16596 18182 . + . ID=gene-LDO38_RS03265;Name=coxB;gbkey=Gene;gene=coxB;gene_biotype=protein_coding;locus_tag=LDO38_RS03265;old_locus_tag=BVI2075_1210021 NZ_CAJZAL010000026.1 Protein Homology CDS 16596 18182 . + 0 ID=cds-WP_011886104.1;Parent=gene-LDO38_RS03265;Dbxref=GenBank:WP_011886104.1;Name=WP_011886104.1;Ontology_term=GO:0004129,GO:0016020;gbkey=CDS;gene=coxB;go_component=membrane|0016020||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398197.1;locus_tag=LDO38_RS03265;product=cytochrome c oxidase subunit II;protein_id=WP_011886104.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 18226 19833 . + . ID=gene-LDO38_RS03270;Name=ctaD;gbkey=Gene;gene=ctaD;gene_biotype=protein_coding;locus_tag=LDO38_RS03270;old_locus_tag=BVI2075_1210022 NZ_CAJZAL010000026.1 Protein Homology CDS 18226 19833 . + 0 ID=cds-WP_011886103.1;Parent=gene-LDO38_RS03270;Dbxref=GenBank:WP_011886103.1;Name=WP_011886103.1;Ontology_term=GO:0015990,GO:0004129;gbkey=CDS;gene=ctaD;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090602.1;locus_tag=LDO38_RS03270;product=cytochrome c oxidase subunit I;protein_id=WP_011886103.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 19925 20065 . + . ID=gene-LDO38_RS03275;Name=LDO38_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03275 NZ_CAJZAL010000026.1 Protein Homology CDS 19925 20065 . + 0 ID=cds-WP_006760728.1;Parent=gene-LDO38_RS03275;Dbxref=GenBank:WP_006760728.1;Name=WP_006760728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486385.1;locus_tag=LDO38_RS03275;product=cytochrome oxidase small assembly protein;protein_id=WP_006760728.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 20101 20709 . + . ID=gene-LDO38_RS03280;Name=LDO38_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03280;old_locus_tag=BVI2075_1210023 NZ_CAJZAL010000026.1 Protein Homology CDS 20101 20709 . + 0 ID=cds-WP_011886102.1;Parent=gene-LDO38_RS03280;Dbxref=GenBank:WP_011886102.1;Name=WP_011886102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024429.1;locus_tag=LDO38_RS03280;product=cytochrome c oxidase assembly protein;protein_id=WP_011886102.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 20726 20926 . + . ID=gene-LDO38_RS03285;Name=LDO38_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03285;old_locus_tag=BVI2075_1210024 NZ_CAJZAL010000026.1 Protein Homology CDS 20726 20926 . + 0 ID=cds-WP_011886101.1;Parent=gene-LDO38_RS03285;Dbxref=GenBank:WP_011886101.1;Name=WP_011886101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398201.1;locus_tag=LDO38_RS03285;product=DUF2970 domain-containing protein;protein_id=WP_011886101.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 21066 21923 . + . ID=gene-LDO38_RS03290;Name=LDO38_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03290;old_locus_tag=BVI2075_1210025 NZ_CAJZAL010000026.1 Protein Homology CDS 21066 21923 . + 0 ID=cds-WP_011886100.1;Parent=gene-LDO38_RS03290;Dbxref=GenBank:WP_011886100.1;Name=WP_011886100.1;Ontology_term=GO:0009060,GO:0019646,GO:0004129,GO:0009055;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA,electron transfer activity|0009055||IEA;go_process=aerobic respiration|0009060||IEA,aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013587015.1;locus_tag=LDO38_RS03290;product=cytochrome c oxidase subunit 3;protein_id=WP_011886100.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 22162 22371 . - . ID=gene-LDO38_RS03295;Name=LDO38_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03295;old_locus_tag=BVI2075_1210027 NZ_CAJZAL010000026.1 Protein Homology CDS 22162 22371 . - 0 ID=cds-WP_224056178.1;Parent=gene-LDO38_RS03295;Dbxref=GenBank:WP_224056178.1;Name=WP_224056178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334311.1;locus_tag=LDO38_RS03295;product=twin transmembrane helix small protein;protein_id=WP_224056178.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 22456 23166 . + . ID=gene-LDO38_RS03300;Name=LDO38_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03300;old_locus_tag=BVI2075_1210026 NZ_CAJZAL010000026.1 Protein Homology CDS 22456 23166 . + 0 ID=cds-WP_011886098.1;Parent=gene-LDO38_RS03300;Dbxref=GenBank:WP_011886098.1;Name=WP_011886098.1;Ontology_term=GO:0033617,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=mitochondrial cytochrome c oxidase assembly|0033617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024434.1;locus_tag=LDO38_RS03300;product=SURF1 family protein;protein_id=WP_011886098.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 23227 23853 . + . ID=gene-LDO38_RS03305;Name=LDO38_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03305;old_locus_tag=BVI2075_1210028 NZ_CAJZAL010000026.1 Protein Homology CDS 23227 23853 . + 0 ID=cds-WP_059668253.1;Parent=gene-LDO38_RS03305;Dbxref=GenBank:WP_059668253.1;Name=WP_059668253.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658000.1;locus_tag=LDO38_RS03305;product=SCO family protein;protein_id=WP_059668253.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 23879 24991 . + . ID=gene-LDO38_RS03310;Name=LDO38_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03310;old_locus_tag=BVI2075_1210029 NZ_CAJZAL010000026.1 Protein Homology CDS 23879 24991 . + 0 ID=cds-WP_011886096.1;Parent=gene-LDO38_RS03310;Dbxref=GenBank:WP_011886096.1;Name=WP_011886096.1;Ontology_term=GO:0006783,GO:0017004,GO:0016491,GO:0020037,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=heme biosynthetic process|0006783||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895968.1;locus_tag=LDO38_RS03310;product=COX15/CtaA family protein;protein_id=WP_011886096.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 25000 25902 . + . ID=gene-LDO38_RS03315;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=LDO38_RS03315;old_locus_tag=BVI2075_1210030 NZ_CAJZAL010000026.1 Protein Homology CDS 25000 25902 . + 0 ID=cds-WP_011886095.1;Parent=gene-LDO38_RS03315;Dbxref=GenBank:WP_011886095.1;Name=WP_011886095.1;Ontology_term=GO:0006783,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760735.1;locus_tag=LDO38_RS03315;product=heme o synthase;protein_id=WP_011886095.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 25921 26538 . + . ID=gene-LDO38_RS03320;Name=LDO38_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03320;old_locus_tag=BVI2075_1210031 NZ_CAJZAL010000026.1 Protein Homology CDS 25921 26538 . + 0 ID=cds-WP_014723689.1;Parent=gene-LDO38_RS03320;Dbxref=GenBank:WP_014723689.1;Name=WP_014723689.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009972812.1;locus_tag=LDO38_RS03320;product=SCO family protein;protein_id=WP_014723689.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 26700 26990 . - . ID=gene-LDO38_RS03325;Name=LDO38_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03325;old_locus_tag=BVI2075_1210032 NZ_CAJZAL010000026.1 Protein Homology CDS 26700 26990 . - 0 ID=cds-WP_011886093.1;Parent=gene-LDO38_RS03325;Dbxref=GenBank:WP_011886093.1;Name=WP_011886093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329263.1;locus_tag=LDO38_RS03325;product=YciI family protein;protein_id=WP_011886093.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq gene 27191 28759 . + . ID=gene-LDO38_RS03330;Name=LDO38_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03330;old_locus_tag=BVI2075_1210034 NZ_CAJZAL010000026.1 Protein Homology CDS 27191 28759 . + 0 ID=cds-WP_045578760.1;Parent=gene-LDO38_RS03330;Dbxref=GenBank:WP_045578760.1;Name=WP_045578760.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723688.1;locus_tag=LDO38_RS03330;product=methyl-accepting chemotaxis protein;protein_id=WP_045578760.1;transl_table=11 NZ_CAJZAL010000026.1 RefSeq pseudogene 28944 29733 . + . ID=gene-LDO38_RS03335;Name=LDO38_RS03335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS03335;old_locus_tag=BVI2075_1210035;pseudo=true NZ_CAJZAL010000026.1 Protein Homology CDS 28944 29733 . + 0 ID=cds-LDO38_RS03335;Parent=gene-LDO38_RS03335;Note=frameshifted;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763338.1;locus_tag=LDO38_RS03335;product=MetQ/NlpA family ABC transporter substrate-binding protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000027.1 1 12849 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000027.1 RefSeq region 1 12849 . + . ID=NZ_CAJZAL010000027.1:1..12849;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_122 NZ_CAJZAL010000027.1 RefSeq gene 1 563 . + . ID=gene-LDO38_RS03340;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=LDO38_RS03340;old_locus_tag=BVI2075_1220001;partial=true;start_range=.,1 NZ_CAJZAL010000027.1 Protein Homology CDS 1 563 . + 2 ID=cds-WP_224056179.1;Parent=gene-LDO38_RS03340;Dbxref=GenBank:WP_224056179.1;Name=WP_224056179.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018442736.1;locus_tag=LDO38_RS03340;partial=true;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_224056179.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000027.1 RefSeq gene 567 1937 . + . ID=gene-LDO38_RS03345;Name=LDO38_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03345;old_locus_tag=BVI2075_1220002 NZ_CAJZAL010000027.1 Protein Homology CDS 567 1937 . + 0 ID=cds-WP_059562707.1;Parent=gene-LDO38_RS03345;Dbxref=GenBank:WP_059562707.1;Name=WP_059562707.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723022.1;locus_tag=LDO38_RS03345;product=cobyrinate a%2Cc-diamide synthase;protein_id=WP_059562707.1;transl_table=11 NZ_CAJZAL010000027.1 RefSeq gene 1980 3143 . - . ID=gene-LDO38_RS03350;Name=LDO38_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03350;old_locus_tag=BVI2075_1220003 NZ_CAJZAL010000027.1 Protein Homology CDS 1980 3143 . - 0 ID=cds-WP_045579119.1;Parent=gene-LDO38_RS03350;Dbxref=GenBank:WP_045579119.1;Name=WP_045579119.1;Ontology_term=GO:0016787,GO:0016810;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328465.1;locus_tag=LDO38_RS03350;product=M20 aminoacylase family protein;protein_id=WP_045579119.1;transl_table=11 NZ_CAJZAL010000027.1 RefSeq gene 3652 5088 . - . ID=gene-LDO38_RS30045;Name=LDO38_RS30045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30045;old_locus_tag=BVI2075_1220004 NZ_CAJZAL010000027.1 Protein Homology CDS 3652 5088 . - 0 ID=cds-WP_080484216.1;Parent=gene-LDO38_RS30045;Dbxref=GenBank:WP_080484216.1;Name=WP_080484216.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723019.1;locus_tag=LDO38_RS30045;product=trypsin-like serine protease;protein_id=WP_080484216.1;transl_table=11 NZ_CAJZAL010000027.1 RefSeq gene 5583 6593 . - . ID=gene-LDO38_RS03370;Name=LDO38_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03370;old_locus_tag=BVI2075_1220006 NZ_CAJZAL010000027.1 Protein Homology CDS 5583 6593 . - 0 ID=cds-WP_014723018.1;Parent=gene-LDO38_RS03370;Dbxref=GenBank:WP_014723018.1;Name=WP_014723018.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328462.1;locus_tag=LDO38_RS03370;product=GNAT family N-acetyltransferase;protein_id=WP_014723018.1;transl_table=11 NZ_CAJZAL010000027.1 RefSeq gene 6593 7432 . - . ID=gene-LDO38_RS03375;Name=LDO38_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03375;old_locus_tag=BVI2075_1220007 NZ_CAJZAL010000027.1 Protein Homology CDS 6593 7432 . - 0 ID=cds-WP_059461781.1;Parent=gene-LDO38_RS03375;Dbxref=GenBank:WP_059461781.1;Name=WP_059461781.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213359.1;locus_tag=LDO38_RS03375;product=formyltransferase family protein;protein_id=WP_059461781.1;transl_table=11 NZ_CAJZAL010000027.1 RefSeq gene 7516 9789 . - . ID=gene-LDO38_RS03380;Name=LDO38_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03380;old_locus_tag=BVI2075_1220008 NZ_CAJZAL010000027.1 Protein Homology CDS 7516 9789 . - 0 ID=cds-WP_435520885.1;Parent=gene-LDO38_RS03380;Dbxref=GenBank:WP_435520885.1;Name=WP_435520885.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404834.1;locus_tag=LDO38_RS03380;product=TonB-dependent siderophore receptor;protein_id=WP_435520885.1;transl_table=11 NZ_CAJZAL010000027.1 RefSeq gene 9836 11215 . - . ID=gene-LDO38_RS03385;Name=LDO38_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03385;old_locus_tag=BVI2075_1220009 NZ_CAJZAL010000027.1 Protein Homology CDS 9836 11215 . - 0 ID=cds-WP_059568155.1;Parent=gene-LDO38_RS03385;Dbxref=GenBank:WP_059568155.1;Name=WP_059568155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755667.1;locus_tag=LDO38_RS03385;product=lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family protein;protein_id=WP_059568155.1;transl_table=11 NZ_CAJZAL010000027.1 RefSeq gene 11405 12506 . - . ID=gene-LDO38_RS03390;Name=LDO38_RS03390;end_range=12506,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03390;old_locus_tag=BVI2075_1220011;partial=true NZ_CAJZAL010000027.1 Protein Homology CDS 11405 12506 . - 1 ID=cds-WP_435520884.1;Parent=gene-LDO38_RS03390;Dbxref=GenBank:WP_435520884.1;Name=WP_435520884.1;Ontology_term=GO:0003824;end_range=12506,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191952.1;locus_tag=LDO38_RS03390;partial=true;product=condensation domain-containing protein;protein_id=WP_435520884.1;transl_table=11 NZ_CAJZAL010000027.1 RefSeq gene 12517 12702 . - . ID=gene-LDO38_RS30285;Name=LDO38_RS30285;end_range=12702,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30285;old_locus_tag=BVI2075_1220012;partial=true;start_range=.,12517 NZ_CAJZAL010000027.1 Protein Homology CDS 12517 12702 . - 1 ID=cds-WP_435520886.1;Parent=gene-LDO38_RS30285;Dbxref=GenBank:WP_435520886.1;Name=WP_435520886.1;end_range=12702,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328458.1;locus_tag=LDO38_RS30285;partial=true;product=hypothetical protein;protein_id=WP_435520886.1;start_range=.,12517;transl_table=11 ##sequence-region NZ_CAJZAL010000028.1 1 26585 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000028.1 RefSeq region 1 26585 . + . ID=NZ_CAJZAL010000028.1:1..26585;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_123 NZ_CAJZAL010000028.1 RefSeq pseudogene 1 134 . - . ID=gene-LDO38_RS30290;Name=LDO38_RS30290;end_range=134,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30290;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000028.1 Protein Homology CDS 1 134 . - 0 ID=cds-LDO38_RS30290;Parent=gene-LDO38_RS30290;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=134,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546667.1;locus_tag=LDO38_RS30290;partial=true;product=MFS transporter;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000028.1 RefSeq gene 145 721 . - . ID=gene-LDO38_RS03395;Name=LDO38_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03395;old_locus_tag=BVI2075_1230002;partial=true;start_range=.,145 NZ_CAJZAL010000028.1 Protein Homology CDS 145 721 . - 0 ID=cds-WP_435520887.1;Parent=gene-LDO38_RS03395;Dbxref=GenBank:WP_435520887.1;Name=WP_435520887.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553003.1;locus_tag=LDO38_RS03395;partial=true;product=MFS transporter;protein_id=WP_435520887.1;start_range=.,145;transl_table=11 NZ_CAJZAL010000028.1 RefSeq gene 818 1738 . + . ID=gene-LDO38_RS03400;Name=LDO38_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03400;old_locus_tag=BVI2075_1230003 NZ_CAJZAL010000028.1 Protein Homology CDS 818 1738 . + 0 ID=cds-WP_011882975.1;Parent=gene-LDO38_RS03400;Dbxref=GenBank:WP_011882975.1;Name=WP_011882975.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752473.1;locus_tag=LDO38_RS03400;product=LysR family transcriptional regulator;protein_id=WP_011882975.1;transl_table=11 NZ_CAJZAL010000028.1 RefSeq gene 1953 2786 . - . ID=gene-LDO38_RS03405;Name=LDO38_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03405;old_locus_tag=BVI2075_1230004 NZ_CAJZAL010000028.1 Protein Homology CDS 1953 2786 . - 0 ID=cds-WP_011882976.1;Parent=gene-LDO38_RS03405;Dbxref=GenBank:WP_011882976.1;Name=WP_011882976.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752472.1;locus_tag=LDO38_RS03405;product=OmpW/AlkL family protein;protein_id=WP_011882976.1;transl_table=11 NZ_CAJZAL010000028.1 RefSeq gene 2803 4044 . - . ID=gene-LDO38_RS03410;Name=LDO38_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03410;old_locus_tag=BVI2075_1230005 NZ_CAJZAL010000028.1 Protein Homology CDS 2803 4044 . - 0 ID=cds-WP_011882977.1;Parent=gene-LDO38_RS03410;Dbxref=GenBank:WP_011882977.1;Name=WP_011882977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762855.1;locus_tag=LDO38_RS03410;product=DUF2957 domain-containing protein;protein_id=WP_011882977.1;transl_table=11 NZ_CAJZAL010000028.1 RefSeq gene 4209 5627 . - . ID=gene-LDO38_RS03415;Name=LDO38_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03415;old_locus_tag=BVI2075_1230006 NZ_CAJZAL010000028.1 Protein Homology CDS 4209 5627 . - 0 ID=cds-WP_059568079.1;Parent=gene-LDO38_RS03415;Dbxref=GenBank:WP_059568079.1;Name=WP_059568079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655738.1;locus_tag=LDO38_RS03415;product=DUF2957 domain-containing protein;protein_id=WP_059568079.1;transl_table=11 NZ_CAJZAL010000028.1 RefSeq gene 6054 7004 . - . ID=gene-LDO38_RS03420;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=LDO38_RS03420;old_locus_tag=BVI2075_1230007 NZ_CAJZAL010000028.1 Protein Homology CDS 6054 7004 . - 0 ID=cds-WP_014722267.1;Parent=gene-LDO38_RS03420;Dbxref=GenBank:WP_014722267.1;Name=WP_014722267.1;Ontology_term=GO:0006526,GO:0003942,GO:0005737;gbkey=CDS;gene=argC;go_component=cytoplasm|0005737||IEA;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497427.1;locus_tag=LDO38_RS03420;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_014722267.1;transl_table=11 NZ_CAJZAL010000028.1 RefSeq gene 7190 7762 . - . ID=gene-LDO38_RS03425;Name=LDO38_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03425;old_locus_tag=BVI2075_1230008 NZ_CAJZAL010000028.1 Protein Homology CDS 7190 7762 . - 0 ID=cds-WP_011882980.1;Parent=gene-LDO38_RS03425;Dbxref=GenBank:WP_011882980.1;Name=WP_011882980.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722268.1;locus_tag=LDO38_RS03425;product=flavodoxin family protein;protein_id=WP_011882980.1;transl_table=11 NZ_CAJZAL010000028.1 RefSeq gene 7959 8564 . - . ID=gene-LDO38_RS03430;Name=LDO38_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03430;old_locus_tag=BVI2075_1230009 NZ_CAJZAL010000028.1 Protein Homology CDS 7959 8564 . - 0 ID=cds-WP_011882981.1;Parent=gene-LDO38_RS03430;Dbxref=GenBank:WP_011882981.1;Name=WP_011882981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895621.1;locus_tag=LDO38_RS03430;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_011882981.1;transl_table=11 NZ_CAJZAL010000028.1 RefSeq gene 8808 9494 . - . ID=gene-LDO38_RS03435;Name=LDO38_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03435;old_locus_tag=BVI2075_1230010 NZ_CAJZAL010000028.1 Protein Homology CDS 8808 9494 . - 0 ID=cds-WP_006752465.1;Parent=gene-LDO38_RS03435;Dbxref=GenBank:WP_006752465.1;Name=WP_006752465.1;Ontology_term=GO:0009116,GO:0004588;gbkey=CDS;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401311.1;locus_tag=LDO38_RS03435;product=orotate phosphoribosyltransferase;protein_id=WP_006752465.1;transl_table=11 NZ_CAJZAL010000028.1 RefSeq gene 9952 12222 . + . ID=gene-LDO38_RS03440;Name=LDO38_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03440;old_locus_tag=BVI2075_1230012 NZ_CAJZAL010000028.1 Protein Homology CDS 9952 12222 . + 0 ID=cds-WP_011882982.1;Parent=gene-LDO38_RS03440;Dbxref=GenBank:WP_011882982.1;Name=WP_011882982.1;Ontology_term=GO:0004470,GO:0004471,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023762.1;locus_tag=LDO38_RS03440;product=NADP-dependent malic enzyme;protein_id=WP_011882982.1;transl_table=11 NZ_CAJZAL010000028.1 RefSeq gene 12367 15957 . - . ID=gene-LDO38_RS03445;Name=LDO38_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03445;old_locus_tag=BVI2075_1230013 NZ_CAJZAL010000028.1 Protein Homology CDS 12367 15957 . - 0 ID=cds-WP_034192914.1;Parent=gene-LDO38_RS03445;Dbxref=GenBank:WP_034192914.1;Name=WP_034192914.1;Ontology_term=GO:0030976,GO:0043805,GO:0046872,GO:0051539;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA,indolepyruvate ferredoxin oxidoreductase activity|0043805||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895623.1;locus_tag=LDO38_RS03445;product=indolepyruvate ferredoxin oxidoreductase family protein;protein_id=WP_034192914.1;transl_table=11 NZ_CAJZAL010000028.1 RefSeq gene 16277 16468 . + . ID=gene-LDO38_RS03450;Name=LDO38_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03450;old_locus_tag=BVI2075_1230014 NZ_CAJZAL010000028.1 Protein Homology CDS 16277 16468 . + 0 ID=cds-WP_014722271.1;Parent=gene-LDO38_RS03450;Dbxref=GenBank:WP_014722271.1;Name=WP_014722271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401308.1;locus_tag=LDO38_RS03450;product=hypothetical protein;protein_id=WP_014722271.1;transl_table=11 NZ_CAJZAL010000028.1 RefSeq gene 16580 17677 . - . ID=gene-LDO38_RS03455;Name=hppD;gbkey=Gene;gene=hppD;gene_biotype=protein_coding;locus_tag=LDO38_RS03455;old_locus_tag=BVI2075_1230015 NZ_CAJZAL010000028.1 Protein Homology CDS 16580 17677 . - 0 ID=cds-WP_041493933.1;Parent=gene-LDO38_RS03455;Dbxref=GenBank:WP_041493933.1;Name=WP_041493933.1;Ontology_term=GO:0006559,GO:0006572,GO:0003868;gbkey=CDS;gene=hppD;go_function=4-hydroxyphenylpyruvate dioxygenase activity|0003868||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,L-tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497422.1;locus_tag=LDO38_RS03455;product=4-hydroxyphenylpyruvate dioxygenase;protein_id=WP_041493933.1;transl_table=11 NZ_CAJZAL010000028.1 RefSeq gene 17891 18415 . + . ID=gene-LDO38_RS03460;Name=LDO38_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03460;old_locus_tag=BVI2075_1230016 NZ_CAJZAL010000028.1 Protein Homology CDS 17891 18415 . + 0 ID=cds-WP_011882986.1;Parent=gene-LDO38_RS03460;Dbxref=GenBank:WP_011882986.1;Name=WP_011882986.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757887.1;locus_tag=LDO38_RS03460;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011882986.1;transl_table=11 NZ_CAJZAL010000028.1 RefSeq gene 18483 19130 . - . ID=gene-LDO38_RS03465;Name=LDO38_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03465;old_locus_tag=BVI2075_1230017 NZ_CAJZAL010000028.1 Protein Homology CDS 18483 19130 . - 0 ID=cds-WP_011882987.1;Parent=gene-LDO38_RS03465;Dbxref=GenBank:WP_011882987.1;Name=WP_011882987.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408711.1;locus_tag=LDO38_RS03465;product=GNAT family N-acetyltransferase;protein_id=WP_011882987.1;transl_table=11 NZ_CAJZAL010000028.1 RefSeq gene 19365 19970 . - . ID=gene-LDO38_RS03470;Name=LDO38_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03470;old_locus_tag=BVI2075_1230019 NZ_CAJZAL010000028.1 Protein Homology CDS 19365 19970 . - 0 ID=cds-WP_011882988.1;Parent=gene-LDO38_RS03470;Dbxref=GenBank:WP_011882988.1;Name=WP_011882988.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762847.1;locus_tag=LDO38_RS03470;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011882988.1;transl_table=11 NZ_CAJZAL010000028.1 RefSeq gene 20012 20827 . - . ID=gene-LDO38_RS03475;Name=LDO38_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03475;old_locus_tag=BVI2075_1230020 NZ_CAJZAL010000028.1 Protein Homology CDS 20012 20827 . - 0 ID=cds-WP_011882989.1;Parent=gene-LDO38_RS03475;Dbxref=GenBank:WP_011882989.1;Name=WP_011882989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895627.1;locus_tag=LDO38_RS03475;product=DUF1835 domain-containing protein;protein_id=WP_011882989.1;transl_table=11 NZ_CAJZAL010000028.1 RefSeq gene 20957 22045 . - . ID=gene-LDO38_RS03480;Name=paaE;gbkey=Gene;gene=paaE;gene_biotype=protein_coding;locus_tag=LDO38_RS03480;old_locus_tag=BVI2075_1230021 NZ_CAJZAL010000028.1 Protein Homology CDS 20957 22045 . - 0 ID=cds-WP_011882990.1;Parent=gene-LDO38_RS03480;Dbxref=GenBank:WP_011882990.1;Name=WP_011882990.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaE;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255661.1;locus_tag=LDO38_RS03480;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaE;protein_id=WP_011882990.1;transl_table=11 NZ_CAJZAL010000028.1 RefSeq gene 22048 22617 . - . ID=gene-LDO38_RS03485;Name=paaD;gbkey=Gene;gene=paaD;gene_biotype=protein_coding;locus_tag=LDO38_RS03485;old_locus_tag=BVI2075_1230022 NZ_CAJZAL010000028.1 Protein Homology CDS 22048 22617 . - 0 ID=cds-WP_069246119.1;Parent=gene-LDO38_RS03485;Dbxref=GenBank:WP_069246119.1;Name=WP_069246119.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaD;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655751.1;locus_tag=LDO38_RS03485;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaD;protein_id=WP_069246119.1;transl_table=11 NZ_CAJZAL010000028.1 RefSeq gene 22652 23455 . - . ID=gene-LDO38_RS03490;Name=paaC;gbkey=Gene;gene=paaC;gene_biotype=protein_coding;locus_tag=LDO38_RS03490;old_locus_tag=BVI2075_1230023 NZ_CAJZAL010000028.1 Protein Homology CDS 22652 23455 . - 0 ID=cds-WP_011882992.1;Parent=gene-LDO38_RS03490;Dbxref=GenBank:WP_011882992.1;Name=WP_011882992.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaC;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009971143.1;locus_tag=LDO38_RS03490;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaC;protein_id=WP_011882992.1;transl_table=11 NZ_CAJZAL010000028.1 RefSeq gene 23466 23750 . - . ID=gene-LDO38_RS03495;Name=paaB;gbkey=Gene;gene=paaB;gene_biotype=protein_coding;locus_tag=LDO38_RS03495;old_locus_tag=BVI2075_1230024 NZ_CAJZAL010000028.1 Protein Homology CDS 23466 23750 . - 0 ID=cds-WP_006752453.1;Parent=gene-LDO38_RS03495;Dbxref=GenBank:WP_006752453.1;Name=WP_006752453.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaB;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895631.1;locus_tag=LDO38_RS03495;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaB;protein_id=WP_006752453.1;transl_table=11 NZ_CAJZAL010000028.1 RefSeq gene 23786 24784 . - . ID=gene-LDO38_RS03500;Name=paaA;gbkey=Gene;gene=paaA;gene_biotype=protein_coding;locus_tag=LDO38_RS03500;old_locus_tag=BVI2075_1230025 NZ_CAJZAL010000028.1 Protein Homology CDS 23786 24784 . - 0 ID=cds-WP_059462340.1;Parent=gene-LDO38_RS03500;Dbxref=GenBank:WP_059462340.1;Name=WP_059462340.1;Ontology_term=GO:0010124,GO:0097266;gbkey=CDS;gene=paaA;go_function=phenylacetyl-CoA 1%2C2-epoxidase activity|0097266||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023750.1;locus_tag=LDO38_RS03500;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaA;protein_id=WP_059462340.1;transl_table=11 NZ_CAJZAL010000028.1 RefSeq gene 24988 26250 . + . ID=gene-LDO38_RS03505;Name=LDO38_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03505;old_locus_tag=BVI2075_1230026 NZ_CAJZAL010000028.1 Protein Homology CDS 24988 26250 . + 0 ID=cds-WP_069246120.1;Parent=gene-LDO38_RS03505;Dbxref=GenBank:WP_069246120.1;Name=WP_069246120.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497417.1;locus_tag=LDO38_RS03505;product=SGNH/GDSL hydrolase family protein;protein_id=WP_069246120.1;transl_table=11 NZ_CAJZAL010000028.1 RefSeq gene 26359 26585 . - . ID=gene-LDO38_RS03510;Name=LDO38_RS03510;end_range=26585,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03510;partial=true NZ_CAJZAL010000028.1 GeneMarkS-2+ CDS 26359 26585 . - 2 ID=cds-WP_224056181.1;Parent=gene-LDO38_RS03510;Dbxref=GenBank:WP_224056181.1;Name=WP_224056181.1;end_range=26585,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS03510;partial=true;product=hypothetical protein;protein_id=WP_224056181.1;transl_table=11 ##sequence-region NZ_CAJZAL010000029.1 1 7602 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000029.1 RefSeq region 1 7602 . + . ID=NZ_CAJZAL010000029.1:1..7602;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_124 NZ_CAJZAL010000029.1 RefSeq gene 171 503 . - . ID=gene-LDO38_RS03515;Name=LDO38_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03515;old_locus_tag=BVI2075_1240002 NZ_CAJZAL010000029.1 Protein Homology CDS 171 503 . - 0 ID=cds-WP_011886299.1;Parent=gene-LDO38_RS03515;Dbxref=GenBank:WP_011886299.1;Name=WP_011886299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197170.1;locus_tag=LDO38_RS03515;product=flagellar protein FliT;protein_id=WP_011886299.1;transl_table=11 NZ_CAJZAL010000029.1 RefSeq gene 500 934 . - . ID=gene-LDO38_RS03520;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=LDO38_RS03520;old_locus_tag=BVI2075_1240003 NZ_CAJZAL010000029.1 Protein Homology CDS 500 934 . - 0 ID=cds-WP_011886300.1;Parent=gene-LDO38_RS03520;Dbxref=GenBank:WP_011886300.1;Name=WP_011886300.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203429.1;locus_tag=LDO38_RS03520;product=flagellar export chaperone FliS;protein_id=WP_011886300.1;transl_table=11 NZ_CAJZAL010000029.1 RefSeq gene 1068 1412 . - . ID=gene-LDO38_RS03525;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=LDO38_RS03525;old_locus_tag=BVI2075_1240004 NZ_CAJZAL010000029.1 Protein Homology CDS 1068 1412 . - 0 ID=cds-WP_011886301.1;Parent=gene-LDO38_RS03525;Dbxref=GenBank:WP_011886301.1;Name=WP_011886301.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761724.1;locus_tag=LDO38_RS03525;product=flagellar hook-basal body complex protein FliE;protein_id=WP_011886301.1;transl_table=11 NZ_CAJZAL010000029.1 RefSeq gene 1661 3424 . + . ID=gene-LDO38_RS03530;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=LDO38_RS03530;old_locus_tag=BVI2075_1240005 NZ_CAJZAL010000029.1 Protein Homology CDS 1661 3424 . + 0 ID=cds-WP_014723838.1;Parent=gene-LDO38_RS03530;Dbxref=GenBank:WP_014723838.1;Name=WP_014723838.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197168.1;locus_tag=LDO38_RS03530;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_014723838.1;transl_table=11 NZ_CAJZAL010000029.1 RefSeq gene 3414 4409 . + . ID=gene-LDO38_RS03535;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=LDO38_RS03535;old_locus_tag=BVI2075_1240006 NZ_CAJZAL010000029.1 Protein Homology CDS 3414 4409 . + 0 ID=cds-WP_011886303.1;Parent=gene-LDO38_RS03535;Dbxref=GenBank:WP_011886303.1;Name=WP_011886303.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334572.1;locus_tag=LDO38_RS03535;product=flagellar motor switch protein FliG;protein_id=WP_011886303.1;transl_table=11 NZ_CAJZAL010000029.1 RefSeq gene 4402 4850 . + . ID=gene-LDO38_RS30295;Name=LDO38_RS30295;end_range=4850,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30295;old_locus_tag=BVI2075_1240007;partial=true NZ_CAJZAL010000029.1 Protein Homology CDS 4402 4850 . + 0 ID=cds-WP_435520888.1;Parent=gene-LDO38_RS30295;Dbxref=GenBank:WP_435520888.1;Name=WP_435520888.1;end_range=4850,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763139.1;locus_tag=LDO38_RS30295;partial=true;product=FliH/SctL family protein;protein_id=WP_435520888.1;transl_table=11 NZ_CAJZAL010000029.1 RefSeq gene 4861 5119 . + . ID=gene-LDO38_RS30300;Name=LDO38_RS30300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30300;old_locus_tag=BVI2075_1240008;partial=true;start_range=.,4861 NZ_CAJZAL010000029.1 Protein Homology CDS 4861 5119 . + 1 ID=cds-WP_435520889.1;Parent=gene-LDO38_RS30300;Dbxref=GenBank:WP_435520889.1;Name=WP_435520889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329409.1;locus_tag=LDO38_RS30300;partial=true;product=FliH/SctL family protein;protein_id=WP_435520889.1;start_range=.,4861;transl_table=11 NZ_CAJZAL010000029.1 RefSeq gene 5113 6642 . + . ID=gene-LDO38_RS03545;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=LDO38_RS03545;old_locus_tag=BVI2075_1240009 NZ_CAJZAL010000029.1 Protein Homology CDS 5113 6642 . + 0 ID=cds-WP_043291565.1;Parent=gene-LDO38_RS03545;Dbxref=GenBank:WP_043291565.1;Name=WP_043291565.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329410.1;locus_tag=LDO38_RS03545;product=flagellar protein export ATPase FliI;protein_id=WP_043291565.1;transl_table=11 NZ_CAJZAL010000029.1 RefSeq gene 6648 7106 . + . ID=gene-LDO38_RS03550;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=LDO38_RS03550;old_locus_tag=BVI2075_1240010 NZ_CAJZAL010000029.1 Protein Homology CDS 6648 7106 . + 0 ID=cds-WP_011886306.1;Parent=gene-LDO38_RS03550;Dbxref=GenBank:WP_011886306.1;Name=WP_011886306.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895750.1;locus_tag=LDO38_RS03550;product=flagellar export protein FliJ;protein_id=WP_011886306.1;transl_table=11 NZ_CAJZAL010000029.1 RefSeq pseudogene 7138 7602 . + . ID=gene-LDO38_RS03555;Name=LDO38_RS03555;end_range=7602,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS03555;partial=true;pseudo=true NZ_CAJZAL010000029.1 Protein Homology CDS 7138 7602 . + 0 ID=cds-LDO38_RS03555;Parent=gene-LDO38_RS03555;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=7602,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658180.1;locus_tag=LDO38_RS03555;partial=true;product=flagellar hook-length control protein FliK;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000030.1 1 36585 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000030.1 RefSeq region 1 36585 . + . ID=NZ_CAJZAL010000030.1:1..36585;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_125 NZ_CAJZAL010000030.1 RefSeq pseudogene 1 793 . - . ID=gene-LDO38_RS03560;Name=LDO38_RS03560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS03560;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000030.1 Protein Homology CDS 1 793 . - 0 ID=cds-LDO38_RS03560;Parent=gene-LDO38_RS03560;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880330.1;locus_tag=LDO38_RS03560;partial=true;product=FUSC family protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 810 1409 . - . ID=gene-LDO38_RS03565;Name=LDO38_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03565;old_locus_tag=BVI2075_1250002 NZ_CAJZAL010000030.1 Protein Homology CDS 810 1409 . - 0 ID=cds-WP_224056182.1;Parent=gene-LDO38_RS03565;Dbxref=GenBank:WP_224056182.1;Name=WP_224056182.1;Ontology_term=GO:0006089;gbkey=CDS;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481910.1;locus_tag=LDO38_RS03565;product=LutC/YkgG family protein;protein_id=WP_224056182.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 1406 2779 . - . ID=gene-LDO38_RS03570;Name=LDO38_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03570;old_locus_tag=BVI2075_1250003 NZ_CAJZAL010000030.1 Protein Homology CDS 1406 2779 . - 0 ID=cds-WP_006481909.1;Parent=gene-LDO38_RS03570;Dbxref=GenBank:WP_006481909.1;Name=WP_006481909.1;Ontology_term=GO:0046872,GO:0051539;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481909.1;locus_tag=LDO38_RS03570;product=lactate utilization protein B;protein_id=WP_006481909.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 2776 3519 . - . ID=gene-LDO38_RS03575;Name=LDO38_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03575;old_locus_tag=BVI2075_1250004 NZ_CAJZAL010000030.1 Protein Homology CDS 2776 3519 . - 0 ID=cds-WP_006481907.1;Parent=gene-LDO38_RS03575;Dbxref=GenBank:WP_006481907.1;Name=WP_006481907.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880331.1;locus_tag=LDO38_RS03575;product=(Fe-S)-binding protein;protein_id=WP_006481907.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 3576 5324 . - . ID=gene-LDO38_RS03580;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=LDO38_RS03580;old_locus_tag=BVI2075_1250005 NZ_CAJZAL010000030.1 Protein Homology CDS 3576 5324 . - 0 ID=cds-WP_014725973.1;Parent=gene-LDO38_RS03580;Dbxref=GenBank:WP_014725973.1;Name=WP_014725973.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880332.1;locus_tag=LDO38_RS03580;product=D-lactate dehydrogenase;protein_id=WP_014725973.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 5661 6572 . - . ID=gene-LDO38_RS03585;Name=LDO38_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03585;old_locus_tag=BVI2075_1250006 NZ_CAJZAL010000030.1 Protein Homology CDS 5661 6572 . - 0 ID=cds-WP_014725974.1;Parent=gene-LDO38_RS03585;Dbxref=GenBank:WP_014725974.1;Name=WP_014725974.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725974.1;locus_tag=LDO38_RS03585;product=LysR family transcriptional regulator;protein_id=WP_014725974.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq pseudogene 6876 7747 . - . ID=gene-LDO38_RS30135;Name=LDO38_RS30135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30135;pseudo=true NZ_CAJZAL010000030.1 Protein Homology CDS 6876 7747 . - 0 ID=cds-LDO38_RS30135;Parent=gene-LDO38_RS30135;Note=frameshifted;Ontology_term=GO:0016491,GO:0050661,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725975.1;locus_tag=LDO38_RS30135;product=NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 7756 7899 . - . ID=gene-LDO38_RS03595;Name=LDO38_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03595;old_locus_tag=BVI2075_1250009 NZ_CAJZAL010000030.1 GeneMarkS-2+ CDS 7756 7899 . - 0 ID=cds-WP_014725976.1;Parent=gene-LDO38_RS03595;Dbxref=GenBank:WP_014725976.1;Name=WP_014725976.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS03595;product=hypothetical protein;protein_id=WP_014725976.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 8072 8926 . + . ID=gene-LDO38_RS03600;Name=LDO38_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03600;old_locus_tag=BVI2075_1250010 NZ_CAJZAL010000030.1 Protein Homology CDS 8072 8926 . + 0 ID=cds-WP_059474928.1;Parent=gene-LDO38_RS03600;Dbxref=GenBank:WP_059474928.1;Name=WP_059474928.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725977.1;locus_tag=LDO38_RS03600;product=LysR family transcriptional regulator;protein_id=WP_059474928.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 9625 10638 . - . ID=gene-LDO38_RS03605;Name=LDO38_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03605;old_locus_tag=BVI2075_1250012 NZ_CAJZAL010000030.1 Protein Homology CDS 9625 10638 . - 0 ID=cds-WP_046428134.1;Parent=gene-LDO38_RS03605;Dbxref=GenBank:WP_046428134.1;Name=WP_046428134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363507.1;locus_tag=LDO38_RS03605;product=hypothetical protein;protein_id=WP_046428134.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 10990 12555 . - . ID=gene-LDO38_RS03610;Name=LDO38_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03610;old_locus_tag=BVI2075_1250013 NZ_CAJZAL010000030.1 Protein Homology CDS 10990 12555 . - 0 ID=cds-WP_224056184.1;Parent=gene-LDO38_RS03610;Dbxref=GenBank:WP_224056184.1;Name=WP_224056184.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880340.1;locus_tag=LDO38_RS03610;product=methyl-accepting chemotaxis protein;protein_id=WP_224056184.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 12903 13652 . - . ID=gene-LDO38_RS03615;Name=LDO38_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03615;old_locus_tag=BVI2075_1250014 NZ_CAJZAL010000030.1 Protein Homology CDS 12903 13652 . - 0 ID=cds-WP_034193916.1;Parent=gene-LDO38_RS03615;Dbxref=GenBank:WP_034193916.1;Name=WP_034193916.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545691.1;locus_tag=LDO38_RS03615;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_034193916.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 13639 14289 . - . ID=gene-LDO38_RS03620;Name=LDO38_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03620;old_locus_tag=BVI2075_1250015 NZ_CAJZAL010000030.1 Protein Homology CDS 13639 14289 . - 0 ID=cds-WP_034193917.1;Parent=gene-LDO38_RS03620;Dbxref=GenBank:WP_034193917.1;Name=WP_034193917.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010097593.1;locus_tag=LDO38_RS03620;product=amino acid ABC transporter permease;protein_id=WP_034193917.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 14286 14972 . - . ID=gene-LDO38_RS03625;Name=LDO38_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03625;old_locus_tag=BVI2075_1250016 NZ_CAJZAL010000030.1 Protein Homology CDS 14286 14972 . - 0 ID=cds-WP_014725982.1;Parent=gene-LDO38_RS03625;Dbxref=GenBank:WP_014725982.1;Name=WP_014725982.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484385.1;locus_tag=LDO38_RS03625;product=amino acid ABC transporter permease;protein_id=WP_014725982.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 15063 15869 . - . ID=gene-LDO38_RS03630;Name=LDO38_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03630;old_locus_tag=BVI2075_1250017 NZ_CAJZAL010000030.1 Protein Homology CDS 15063 15869 . - 0 ID=cds-WP_011880344.1;Parent=gene-LDO38_RS03630;Dbxref=GenBank:WP_011880344.1;Name=WP_011880344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484387.1;locus_tag=LDO38_RS03630;product=transporter substrate-binding domain-containing protein;protein_id=WP_011880344.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 16288 17637 . - . ID=gene-LDO38_RS03635;Name=LDO38_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03635;old_locus_tag=BVI2075_1250018 NZ_CAJZAL010000030.1 Protein Homology CDS 16288 17637 . - 0 ID=cds-WP_224056189.1;Parent=gene-LDO38_RS03635;Dbxref=GenBank:WP_224056189.1;Name=WP_224056189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725985.1;locus_tag=LDO38_RS03635;product=ATP-binding protein;protein_id=WP_224056189.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 17637 18299 . - . ID=gene-LDO38_RS03640;Name=LDO38_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03640;old_locus_tag=BVI2075_1250019 NZ_CAJZAL010000030.1 Protein Homology CDS 17637 18299 . - 0 ID=cds-WP_011880346.1;Parent=gene-LDO38_RS03640;Dbxref=GenBank:WP_011880346.1;Name=WP_011880346.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880346.1;locus_tag=LDO38_RS03640;product=response regulator transcription factor;protein_id=WP_011880346.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 18463 18837 . + . ID=gene-LDO38_RS03645;Name=LDO38_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03645;old_locus_tag=BVI2075_1250020 NZ_CAJZAL010000030.1 Protein Homology CDS 18463 18837 . + 0 ID=cds-WP_011880347.1;Parent=gene-LDO38_RS03645;Dbxref=GenBank:WP_011880347.1;Name=WP_011880347.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0020037,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,heme binding|0020037||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880347.1;locus_tag=LDO38_RS03645;product=cytochrome b562;protein_id=WP_011880347.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 18876 19442 . + . ID=gene-LDO38_RS03650;Name=LDO38_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03650;old_locus_tag=BVI2075_1250021 NZ_CAJZAL010000030.1 Protein Homology CDS 18876 19442 . + 0 ID=cds-WP_224056185.1;Parent=gene-LDO38_RS03650;Dbxref=GenBank:WP_224056185.1;Name=WP_224056185.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725986.1;locus_tag=LDO38_RS03650;product=cytochrome b;protein_id=WP_224056185.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 19351 20310 . + . ID=gene-LDO38_RS30140;Name=LDO38_RS30140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30140;old_locus_tag=BVI2075_1250022 NZ_CAJZAL010000030.1 Protein Homology CDS 19351 20310 . + 0 ID=cds-WP_354003646.1;Parent=gene-LDO38_RS30140;Dbxref=GenBank:WP_354003646.1;Name=WP_354003646.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013936.6;locus_tag=LDO38_RS30140;product=hemerythrin domain-containing protein;protein_id=WP_354003646.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 20463 21413 . + . ID=gene-LDO38_RS03660;Name=LDO38_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03660;old_locus_tag=BVI2075_1250024 NZ_CAJZAL010000030.1 Protein Homology CDS 20463 21413 . + 0 ID=cds-WP_224056186.1;Parent=gene-LDO38_RS03660;Dbxref=GenBank:WP_224056186.1;Name=WP_224056186.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880350.1;locus_tag=LDO38_RS03660;product=universal stress protein;protein_id=WP_224056186.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 21426 23717 . - . ID=gene-LDO38_RS03665;Name=LDO38_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03665;old_locus_tag=BVI2075_1250025 NZ_CAJZAL010000030.1 Protein Homology CDS 21426 23717 . - 0 ID=cds-WP_224056187.1;Parent=gene-LDO38_RS03665;Dbxref=GenBank:WP_224056187.1;Name=WP_224056187.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880351.1;locus_tag=LDO38_RS03665;product=heavy metal translocating P-type ATPase;protein_id=WP_224056187.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 23935 24552 . + . ID=gene-LDO38_RS03670;Name=LDO38_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03670;old_locus_tag=BVI2075_1250026 NZ_CAJZAL010000030.1 Protein Homology CDS 23935 24552 . + 0 ID=cds-WP_014725991.1;Parent=gene-LDO38_RS03670;Dbxref=GenBank:WP_014725991.1;Name=WP_014725991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880352.1;locus_tag=LDO38_RS03670;product=VTT domain-containing protein;protein_id=WP_014725991.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 24597 25493 . - . ID=gene-LDO38_RS03675;Name=LDO38_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03675;old_locus_tag=BVI2075_1250027 NZ_CAJZAL010000030.1 Protein Homology CDS 24597 25493 . - 0 ID=cds-WP_072465504.1;Parent=gene-LDO38_RS03675;Dbxref=GenBank:WP_072465504.1;Name=WP_072465504.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880353.1;locus_tag=LDO38_RS03675;product=cation diffusion facilitator family transporter;protein_id=WP_072465504.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 25614 25961 . - . ID=gene-LDO38_RS03680;Name=LDO38_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03680;old_locus_tag=BVI2075_1250028 NZ_CAJZAL010000030.1 Protein Homology CDS 25614 25961 . - 0 ID=cds-WP_011880354.1;Parent=gene-LDO38_RS03680;Dbxref=GenBank:WP_011880354.1;Name=WP_011880354.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880354.1;locus_tag=LDO38_RS03680;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_011880354.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 26183 26617 . + . ID=gene-LDO38_RS03685;Name=LDO38_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03685;old_locus_tag=BVI2075_1250029 NZ_CAJZAL010000030.1 Protein Homology CDS 26183 26617 . + 0 ID=cds-WP_046428151.1;Parent=gene-LDO38_RS03685;Dbxref=GenBank:WP_046428151.1;Name=WP_046428151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009898199.1;locus_tag=LDO38_RS03685;product=hypothetical protein;protein_id=WP_046428151.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 26753 28159 . - . ID=gene-LDO38_RS03690;Name=LDO38_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03690;old_locus_tag=BVI2075_1250030 NZ_CAJZAL010000030.1 Protein Homology CDS 26753 28159 . - 0 ID=cds-WP_034193924.1;Parent=gene-LDO38_RS03690;Dbxref=GenBank:WP_034193924.1;Name=WP_034193924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218219.1;locus_tag=LDO38_RS03690;product=ATP-binding protein;protein_id=WP_034193924.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 28156 28821 . - . ID=gene-LDO38_RS03695;Name=LDO38_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03695;old_locus_tag=BVI2075_1250031 NZ_CAJZAL010000030.1 Protein Homology CDS 28156 28821 . - 0 ID=cds-WP_034193925.1;Parent=gene-LDO38_RS03695;Dbxref=GenBank:WP_034193925.1;Name=WP_034193925.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218220.1;locus_tag=LDO38_RS03695;product=response regulator;protein_id=WP_034193925.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 28850 29587 . - . ID=gene-LDO38_RS03700;Name=LDO38_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03700;old_locus_tag=BVI2075_1250032 NZ_CAJZAL010000030.1 Protein Homology CDS 28850 29587 . - 0 ID=cds-WP_176154197.1;Parent=gene-LDO38_RS03700;Dbxref=GenBank:WP_176154197.1;Name=WP_176154197.1;Ontology_term=GO:0009055,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372548.1;locus_tag=LDO38_RS03700;product=cytochrome b/b6 domain-containing protein;protein_id=WP_176154197.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 29553 30062 . - . ID=gene-LDO38_RS03705;Name=LDO38_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03705;old_locus_tag=BVI2075_1250033 NZ_CAJZAL010000030.1 Protein Homology CDS 29553 30062 . - 0 ID=cds-WP_059582669.1;Parent=gene-LDO38_RS03705;Dbxref=GenBank:WP_059582669.1;Name=WP_059582669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725996.1;locus_tag=LDO38_RS03705;product=diheme cytochrome c;protein_id=WP_059582669.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 30075 30431 . - . ID=gene-LDO38_RS03710;Name=LDO38_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03710;old_locus_tag=BVI2075_1250034 NZ_CAJZAL010000030.1 Protein Homology CDS 30075 30431 . - 0 ID=cds-WP_014725997.1;Parent=gene-LDO38_RS03710;Dbxref=GenBank:WP_014725997.1;Name=WP_014725997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725997.1;locus_tag=LDO38_RS03710;product=DUF1924 domain-containing protein;protein_id=WP_014725997.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 30831 31304 . + . ID=gene-LDO38_RS03715;Name=LDO38_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03715 NZ_CAJZAL010000030.1 Protein Homology CDS 30831 31304 . + 0 ID=cds-WP_011880360.1;Parent=gene-LDO38_RS03715;Dbxref=GenBank:WP_011880360.1;Name=WP_011880360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488450.1;locus_tag=LDO38_RS03715;product=hypothetical protein;protein_id=WP_011880360.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 31420 33816 . - . ID=gene-LDO38_RS03720;Name=LDO38_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03720;old_locus_tag=BVI2075_1250036 NZ_CAJZAL010000030.1 Protein Homology CDS 31420 33816 . - 0 ID=cds-WP_176044292.1;Parent=gene-LDO38_RS03720;Dbxref=GenBank:WP_176044292.1;Name=WP_176044292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880361.1;locus_tag=LDO38_RS03720;product=serine hydrolase;protein_id=WP_176044292.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 33936 34409 . - . ID=gene-LDO38_RS03725;Name=LDO38_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03725;old_locus_tag=BVI2075_1250037 NZ_CAJZAL010000030.1 Protein Homology CDS 33936 34409 . - 0 ID=cds-WP_011880362.1;Parent=gene-LDO38_RS03725;Dbxref=GenBank:WP_011880362.1;Name=WP_011880362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880362.1;locus_tag=LDO38_RS03725;product=hypothetical protein;protein_id=WP_011880362.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 34874 35350 . + . ID=gene-LDO38_RS03730;Name=LDO38_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03730;old_locus_tag=BVI2075_1250038 NZ_CAJZAL010000030.1 Protein Homology CDS 34874 35350 . + 0 ID=cds-WP_011880364.1;Parent=gene-LDO38_RS03730;Dbxref=GenBank:WP_011880364.1;Name=WP_011880364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726000.1;locus_tag=LDO38_RS03730;product=lecithin retinol acyltransferase family protein;protein_id=WP_011880364.1;transl_table=11 NZ_CAJZAL010000030.1 RefSeq gene 35502 36585 . + . ID=gene-LDO38_RS03735;Name=LDO38_RS03735;end_range=36585,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03735;partial=true NZ_CAJZAL010000030.1 Protein Homology CDS 35502 36585 . + 0 ID=cds-WP_435520890.1;Parent=gene-LDO38_RS03735;Dbxref=GenBank:WP_435520890.1;Name=WP_435520890.1;Ontology_term=GO:0006313,GO:0004803;end_range=36585,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611775.1;locus_tag=LDO38_RS03735;partial=true;product=IS256-like element ISBcen18 family transposase;protein_id=WP_435520890.1;transl_table=11 ##sequence-region NZ_CAJZAL010000031.1 1 43655 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000031.1 RefSeq region 1 43655 . + . ID=NZ_CAJZAL010000031.1:1..43655;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_126 NZ_CAJZAL010000031.1 RefSeq pseudogene 1 120 . + . ID=gene-LDO38_RS30305;Name=LDO38_RS30305;end_range=120,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30305;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000031.1 Protein Homology CDS 1 120 . + 1 ID=cds-LDO38_RS30305;Parent=gene-LDO38_RS30305;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=120,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882477.1;locus_tag=LDO38_RS30305;partial=true;product=urea transporter;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq pseudogene 131 300 . + . ID=gene-LDO38_RS30310;Name=LDO38_RS30310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30310;old_locus_tag=BVI2075_1260002;partial=true;pseudo=true;start_range=.,131 NZ_CAJZAL010000031.1 Protein Homology CDS 131 300 . + 0 ID=cds-LDO38_RS30310;Parent=gene-LDO38_RS30310;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759163.1;locus_tag=LDO38_RS30310;partial=true;product=urea transporter;pseudo=true;start_range=.,131;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 312 434 . + . ID=gene-LDO38_RS30050;Name=LDO38_RS30050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30050 NZ_CAJZAL010000031.1 GeneMarkS-2+ CDS 312 434 . + 0 ID=cds-WP_258569974.1;Parent=gene-LDO38_RS30050;Dbxref=GenBank:WP_258569974.1;Name=WP_258569974.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30050;product=hypothetical protein;protein_id=WP_258569974.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 606 5447 . + . ID=gene-LDO38_RS03745;Name=LDO38_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03745;old_locus_tag=BVI2075_1260004 NZ_CAJZAL010000031.1 Protein Homology CDS 606 5447 . + 0 ID=cds-WP_224056190.1;Parent=gene-LDO38_RS03745;Dbxref=GenBank:WP_224056190.1;Name=WP_224056190.1;Ontology_term=GO:0004352;gbkey=CDS;go_function=glutamate dehydrogenase (NAD+) activity|0004352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487209.1;locus_tag=LDO38_RS03745;product=NAD-glutamate dehydrogenase;protein_id=WP_224056190.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 5469 6326 . - . ID=gene-LDO38_RS03750;Name=LDO38_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03750;old_locus_tag=BVI2075_1260005 NZ_CAJZAL010000031.1 Protein Homology CDS 5469 6326 . - 0 ID=cds-WP_059461394.1;Parent=gene-LDO38_RS03750;Dbxref=GenBank:WP_059461394.1;Name=WP_059461394.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882479.1;locus_tag=LDO38_RS03750;product=class I SAM-dependent methyltransferase;protein_id=WP_059461394.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 6323 6484 . - . ID=gene-LDO38_RS03755;Name=LDO38_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03755;old_locus_tag=BVI2075_1260006 NZ_CAJZAL010000031.1 GeneMarkS-2+ CDS 6323 6484 . - 0 ID=cds-WP_166677067.1;Parent=gene-LDO38_RS03755;Dbxref=GenBank:WP_166677067.1;Name=WP_166677067.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS03755;product=hypothetical protein;protein_id=WP_166677067.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 6486 6629 . - . ID=gene-LDO38_RS03760;Name=LDO38_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03760;old_locus_tag=BVI2075_1260007 NZ_CAJZAL010000031.1 Protein Homology CDS 6486 6629 . - 0 ID=cds-WP_166677068.1;Parent=gene-LDO38_RS03760;Dbxref=GenBank:WP_166677068.1;Name=WP_166677068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882481.1;locus_tag=LDO38_RS03760;product=hypothetical protein;protein_id=WP_166677068.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 6732 7565 . - . ID=gene-LDO38_RS03765;Name=LDO38_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03765;old_locus_tag=BVI2075_1260008 NZ_CAJZAL010000031.1 Protein Homology CDS 6732 7565 . - 0 ID=cds-WP_014725258.1;Parent=gene-LDO38_RS03765;Dbxref=GenBank:WP_014725258.1;Name=WP_014725258.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882482.1;locus_tag=LDO38_RS03765;product=arylamine N-acetyltransferase family protein;protein_id=WP_014725258.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 7666 8358 . - . ID=gene-LDO38_RS03770;Name=LDO38_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03770;old_locus_tag=BVI2075_1260009 NZ_CAJZAL010000031.1 Protein Homology CDS 7666 8358 . - 0 ID=cds-WP_181709276.1;Parent=gene-LDO38_RS03770;Dbxref=GenBank:WP_181709276.1;Name=WP_181709276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216821.1;locus_tag=LDO38_RS03770;product=hypothetical protein;protein_id=WP_181709276.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 8637 10118 . - . ID=gene-LDO38_RS03775;Name=LDO38_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03775;old_locus_tag=BVI2075_1260010 NZ_CAJZAL010000031.1 Protein Homology CDS 8637 10118 . - 0 ID=cds-WP_224056191.1;Parent=gene-LDO38_RS03775;Dbxref=GenBank:WP_224056191.1;Name=WP_224056191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396798.1;locus_tag=LDO38_RS03775;product=amidase;protein_id=WP_224056191.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 10498 10956 . - . ID=gene-LDO38_RS03780;Name=LDO38_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03780;old_locus_tag=BVI2075_1260011 NZ_CAJZAL010000031.1 Protein Homology CDS 10498 10956 . - 0 ID=cds-WP_011882485.1;Parent=gene-LDO38_RS03780;Dbxref=GenBank:WP_011882485.1;Name=WP_011882485.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882485.1;locus_tag=LDO38_RS03780;product=pseudoazurin;protein_id=WP_011882485.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 11014 13239 . - . ID=gene-LDO38_RS03785;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=LDO38_RS03785;old_locus_tag=BVI2075_1260012 NZ_CAJZAL010000031.1 Protein Homology CDS 11014 13239 . - 0 ID=cds-WP_014725263.1;Parent=gene-LDO38_RS03785;Dbxref=GenBank:WP_014725263.1;Name=WP_014725263.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725263.1;locus_tag=LDO38_RS03785;product=catalase/peroxidase HPI;protein_id=WP_014725263.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 14063 14497 . + . ID=gene-LDO38_RS03790;Name=LDO38_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03790;old_locus_tag=BVI2075_1260014 NZ_CAJZAL010000031.1 Protein Homology CDS 14063 14497 . + 0 ID=cds-WP_014725264.1;Parent=gene-LDO38_RS03790;Dbxref=GenBank:WP_014725264.1;Name=WP_014725264.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758080.1;locus_tag=LDO38_RS03790;product=universal stress protein;protein_id=WP_014725264.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 15134 15382 . + . ID=gene-LDO38_RS03795;Name=LDO38_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03795;old_locus_tag=BVI2075_1260017 NZ_CAJZAL010000031.1 Protein Homology CDS 15134 15382 . + 0 ID=cds-WP_059475213.1;Parent=gene-LDO38_RS03795;Dbxref=GenBank:WP_059475213.1;Name=WP_059475213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216816.1;locus_tag=LDO38_RS03795;product=hypothetical protein;protein_id=WP_059475213.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 15859 17145 . + . ID=gene-LDO38_RS03800;Name=LDO38_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03800;old_locus_tag=BVI2075_1260019 NZ_CAJZAL010000031.1 Protein Homology CDS 15859 17145 . + 0 ID=cds-WP_014725267.1;Parent=gene-LDO38_RS03800;Dbxref=GenBank:WP_014725267.1;Name=WP_014725267.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481465.1;locus_tag=LDO38_RS03800;product=Nramp family divalent metal transporter;protein_id=WP_014725267.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 17240 18475 . + . ID=gene-LDO38_RS03805;Name=LDO38_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03805;old_locus_tag=BVI2075_1260020 NZ_CAJZAL010000031.1 Protein Homology CDS 17240 18475 . + 0 ID=cds-WP_059739123.1;Parent=gene-LDO38_RS03805;Dbxref=GenBank:WP_059739123.1;Name=WP_059739123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725268.1;locus_tag=LDO38_RS03805;product=DUF2252 family protein;protein_id=WP_059739123.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 18629 19030 . - . ID=gene-LDO38_RS03810;Name=LDO38_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03810;old_locus_tag=BVI2075_1260021 NZ_CAJZAL010000031.1 Protein Homology CDS 18629 19030 . - 0 ID=cds-WP_011882493.1;Parent=gene-LDO38_RS03810;Dbxref=GenBank:WP_011882493.1;Name=WP_011882493.1;Ontology_term=GO:0003680;gbkey=CDS;go_function=minor groove of adenine-thymine-rich DNA binding|0003680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659083.1;locus_tag=LDO38_RS03810;product=PPC domain-containing DNA-binding protein;protein_id=WP_011882493.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 19126 20148 . - . ID=gene-LDO38_RS03815;Name=LDO38_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03815;old_locus_tag=BVI2075_1260022 NZ_CAJZAL010000031.1 Protein Homology CDS 19126 20148 . - 0 ID=cds-WP_224056192.1;Parent=gene-LDO38_RS03815;Dbxref=GenBank:WP_224056192.1;Name=WP_224056192.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898941.1;locus_tag=LDO38_RS03815;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_224056192.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 20162 21829 . - . ID=gene-LDO38_RS03820;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=LDO38_RS03820;old_locus_tag=BVI2075_1260023 NZ_CAJZAL010000031.1 Protein Homology CDS 20162 21829 . - 0 ID=cds-WP_011882495.1;Parent=gene-LDO38_RS03820;Dbxref=GenBank:WP_011882495.1;Name=WP_011882495.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659085.1;locus_tag=LDO38_RS03820;product=hydroxylamine reductase;protein_id=WP_011882495.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 22015 22242 . - . ID=gene-LDO38_RS03825;Name=LDO38_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03825;old_locus_tag=BVI2075_1260025 NZ_CAJZAL010000031.1 Protein Homology CDS 22015 22242 . - 0 ID=cds-WP_011882496.1;Parent=gene-LDO38_RS03825;Dbxref=GenBank:WP_011882496.1;Name=WP_011882496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882496.1;locus_tag=LDO38_RS03825;product=DUF3079 domain-containing protein;protein_id=WP_011882496.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 22415 22843 . - . ID=gene-LDO38_RS03830;Name=LDO38_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03830;old_locus_tag=BVI2075_1260026 NZ_CAJZAL010000031.1 Protein Homology CDS 22415 22843 . - 0 ID=cds-WP_224020488.1;Parent=gene-LDO38_RS03830;Dbxref=GenBank:WP_224020488.1;Name=WP_224020488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882497.1;locus_tag=LDO38_RS03830;product=YbaB/EbfC family DNA-binding protein;protein_id=WP_224020488.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 22951 24384 . - . ID=gene-LDO38_RS03835;Name=LDO38_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03835;old_locus_tag=BVI2075_1260027 NZ_CAJZAL010000031.1 Protein Homology CDS 22951 24384 . - 0 ID=cds-WP_435520891.1;Parent=gene-LDO38_RS03835;Dbxref=GenBank:WP_435520891.1;Name=WP_435520891.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004632664.1;locus_tag=LDO38_RS03835;product=Do family serine endopeptidase;protein_id=WP_435520891.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 24537 24878 . - . ID=gene-LDO38_RS03840;Name=LDO38_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03840;old_locus_tag=BVI2075_1260029 NZ_CAJZAL010000031.1 Protein Homology CDS 24537 24878 . - 0 ID=cds-WP_224056197.1;Parent=gene-LDO38_RS03840;Dbxref=GenBank:WP_224056197.1;Name=WP_224056197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725273.1;locus_tag=LDO38_RS03840;product=hypothetical protein;protein_id=WP_224056197.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 24946 25986 . - . ID=gene-LDO38_RS03845;Name=LDO38_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03845;old_locus_tag=BVI2075_1260030 NZ_CAJZAL010000031.1 Protein Homology CDS 24946 25986 . - 0 ID=cds-WP_175899293.1;Parent=gene-LDO38_RS03845;Dbxref=GenBank:WP_175899293.1;Name=WP_175899293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725274.1;locus_tag=LDO38_RS03845;product=hypothetical protein;protein_id=WP_175899293.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 25993 26883 . - . ID=gene-LDO38_RS03850;Name=LDO38_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03850;old_locus_tag=BVI2075_1260031 NZ_CAJZAL010000031.1 Protein Homology CDS 25993 26883 . - 0 ID=cds-WP_059560474.1;Parent=gene-LDO38_RS03850;Dbxref=GenBank:WP_059560474.1;Name=WP_059560474.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600706.1;locus_tag=LDO38_RS03850;product=peptidylprolyl isomerase;protein_id=WP_059560474.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 26971 27390 . - . ID=gene-LDO38_RS03855;Name=LDO38_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03855;old_locus_tag=BVI2075_1260032 NZ_CAJZAL010000031.1 Protein Homology CDS 26971 27390 . - 0 ID=cds-WP_224056194.1;Parent=gene-LDO38_RS03855;Dbxref=GenBank:WP_224056194.1;Name=WP_224056194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882502.1;locus_tag=LDO38_RS03855;product=hypothetical protein;protein_id=WP_224056194.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 27408 27983 . - . ID=gene-LDO38_RS03860;Name=LDO38_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03860;old_locus_tag=BVI2075_1260033 NZ_CAJZAL010000031.1 Protein Homology CDS 27408 27983 . - 0 ID=cds-WP_176315095.1;Parent=gene-LDO38_RS03860;Dbxref=GenBank:WP_176315095.1;Name=WP_176315095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725277.1;locus_tag=LDO38_RS03860;product=YbjN domain-containing protein;protein_id=WP_176315095.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 28040 28744 . - . ID=gene-LDO38_RS03865;Name=LDO38_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03865;old_locus_tag=BVI2075_1260034 NZ_CAJZAL010000031.1 Protein Homology CDS 28040 28744 . - 0 ID=cds-WP_176315096.1;Parent=gene-LDO38_RS03865;Dbxref=GenBank:WP_176315096.1;Name=WP_176315096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882504.1;locus_tag=LDO38_RS03865;product=hypothetical protein;protein_id=WP_176315096.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 28757 30571 . - . ID=gene-LDO38_RS03870;Name=LDO38_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03870;old_locus_tag=BVI2075_1260036 NZ_CAJZAL010000031.1 Protein Homology CDS 28757 30571 . - 0 ID=cds-WP_014725279.1;Parent=gene-LDO38_RS03870;Dbxref=GenBank:WP_014725279.1;Name=WP_014725279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882505.1;locus_tag=LDO38_RS03870;product=putative porin;protein_id=WP_014725279.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 30664 31362 . - . ID=gene-LDO38_RS03875;Name=LDO38_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03875;old_locus_tag=BVI2075_1260037 NZ_CAJZAL010000031.1 Protein Homology CDS 30664 31362 . - 0 ID=cds-WP_011882506.1;Parent=gene-LDO38_RS03875;Dbxref=GenBank:WP_011882506.1;Name=WP_011882506.1;Ontology_term=GO:0031992,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=energy transducer activity|0031992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009916439.1;locus_tag=LDO38_RS03875;product=energy transducer TonB family protein;protein_id=WP_011882506.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 31367 31777 . - . ID=gene-LDO38_RS03880;Name=LDO38_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03880;old_locus_tag=BVI2075_1260038 NZ_CAJZAL010000031.1 Protein Homology CDS 31367 31777 . - 0 ID=cds-WP_014725280.1;Parent=gene-LDO38_RS03880;Dbxref=GenBank:WP_014725280.1;Name=WP_014725280.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354695.1;locus_tag=LDO38_RS03880;product=ExbD/TolR family protein;protein_id=WP_014725280.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 31797 33602 . - . ID=gene-LDO38_RS03885;Name=LDO38_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03885;old_locus_tag=BVI2075_1260039 NZ_CAJZAL010000031.1 Protein Homology CDS 31797 33602 . - 0 ID=cds-WP_045578409.1;Parent=gene-LDO38_RS03885;Dbxref=GenBank:WP_045578409.1;Name=WP_045578409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882508.1;locus_tag=LDO38_RS03885;product=DUF2341 domain-containing protein;protein_id=WP_045578409.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 33671 35335 . - . ID=gene-LDO38_RS03890;Name=LDO38_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03890;old_locus_tag=BVI2075_1260040 NZ_CAJZAL010000031.1 Protein Homology CDS 33671 35335 . - 0 ID=cds-WP_224056195.1;Parent=gene-LDO38_RS03890;Dbxref=GenBank:WP_224056195.1;Name=WP_224056195.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882509.1;locus_tag=LDO38_RS03890;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_224056195.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 36166 36747 . + . ID=gene-LDO38_RS03895;Name=LDO38_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03895;old_locus_tag=BVI2075_1260041 NZ_CAJZAL010000031.1 Protein Homology CDS 36166 36747 . + 0 ID=cds-WP_046425334.1;Parent=gene-LDO38_RS03895;Dbxref=GenBank:WP_046425334.1;Name=WP_046425334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725284.1;locus_tag=LDO38_RS03895;product=hypothetical protein;protein_id=WP_046425334.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 36793 37788 . + . ID=gene-LDO38_RS03900;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=LDO38_RS03900;old_locus_tag=BVI2075_1260042 NZ_CAJZAL010000031.1 Protein Homology CDS 36793 37788 . + 0 ID=cds-WP_069240332.1;Parent=gene-LDO38_RS03900;Dbxref=GenBank:WP_069240332.1;Name=WP_069240332.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=gspK;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882512.1;locus_tag=LDO38_RS03900;product=type II secretion system minor pseudopilin GspK;protein_id=WP_069240332.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 37823 39463 . - . ID=gene-LDO38_RS03905;Name=LDO38_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03905;old_locus_tag=BVI2075_1260043 NZ_CAJZAL010000031.1 Protein Homology CDS 37823 39463 . - 0 ID=cds-WP_069240333.1;Parent=gene-LDO38_RS03905;Dbxref=GenBank:WP_069240333.1;Name=WP_069240333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882513.1;locus_tag=LDO38_RS03905;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_069240333.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 40019 40273 . - . ID=gene-LDO38_RS03910;Name=LDO38_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03910;old_locus_tag=BVI2075_1260046 NZ_CAJZAL010000031.1 Protein Homology CDS 40019 40273 . - 0 ID=cds-WP_059560454.1;Parent=gene-LDO38_RS03910;Dbxref=GenBank:WP_059560454.1;Name=WP_059560454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725288.1;locus_tag=LDO38_RS03910;product=FecR/PupR family sigma factor regulator;protein_id=WP_059560454.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 40525 41523 . - . ID=gene-LDO38_RS03915;Name=LDO38_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03915;old_locus_tag=BVI2075_1260047 NZ_CAJZAL010000031.1 Protein Homology CDS 40525 41523 . - 0 ID=cds-WP_052691538.1;Parent=gene-LDO38_RS03915;Dbxref=GenBank:WP_052691538.1;Name=WP_052691538.1;Ontology_term=GO:0006811,GO:0004888,GO:0016989;gbkey=CDS;go_function=transmembrane signaling receptor activity|0004888||IEA,sigma factor antagonist activity|0016989||IEA;go_process=monoatomic ion transport|0006811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882515.1;locus_tag=LDO38_RS03915;product=FecR family protein;protein_id=WP_052691538.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 41532 42098 . - . ID=gene-LDO38_RS03920;Name=LDO38_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03920;old_locus_tag=BVI2075_1260048 NZ_CAJZAL010000031.1 Protein Homology CDS 41532 42098 . - 0 ID=cds-WP_011882516.1;Parent=gene-LDO38_RS03920;Dbxref=GenBank:WP_011882516.1;Name=WP_011882516.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882516.1;locus_tag=LDO38_RS03920;product=RNA polymerase sigma factor;protein_id=WP_011882516.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 42105 42842 . - . ID=gene-LDO38_RS03925;Name=LDO38_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03925;old_locus_tag=BVI2075_1260049 NZ_CAJZAL010000031.1 Protein Homology CDS 42105 42842 . - 0 ID=cds-WP_034195242.1;Parent=gene-LDO38_RS03925;Dbxref=GenBank:WP_034195242.1;Name=WP_034195242.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882517.1;locus_tag=LDO38_RS03925;product=secretin and TonB N-terminal domain-containing protein;protein_id=WP_034195242.1;transl_table=11 NZ_CAJZAL010000031.1 RefSeq gene 43002 43514 . - . ID=gene-LDO38_RS03930;Name=LDO38_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03930;old_locus_tag=BVI2075_1260050 NZ_CAJZAL010000031.1 Protein Homology CDS 43002 43514 . - 0 ID=cds-WP_014725291.1;Parent=gene-LDO38_RS03930;Dbxref=GenBank:WP_014725291.1;Name=WP_014725291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725291.1;locus_tag=LDO38_RS03930;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_014725291.1;transl_table=11 ##sequence-region NZ_CAJZAL010000032.1 1 12041 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000032.1 RefSeq region 1 12041 . + . ID=NZ_CAJZAL010000032.1:1..12041;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_127 NZ_CAJZAL010000032.1 RefSeq gene 9 158 . - . ID=gene-LDO38_RS03935;Name=LDO38_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03935 NZ_CAJZAL010000032.1 Protein Homology CDS 9 158 . - 0 ID=cds-WP_224056198.1;Parent=gene-LDO38_RS03935;Dbxref=GenBank:WP_224056198.1;Name=WP_224056198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885752.1;locus_tag=LDO38_RS03935;product=hypothetical protein;protein_id=WP_224056198.1;transl_table=11 NZ_CAJZAL010000032.1 RefSeq gene 1351 1488 . + . ID=gene-LDO38_RS03940;Name=LDO38_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03940;old_locus_tag=BVI2075_1270002 NZ_CAJZAL010000032.1 Protein Homology CDS 1351 1488 . + 0 ID=cds-WP_014725409.1;Parent=gene-LDO38_RS03940;Dbxref=GenBank:WP_014725409.1;Name=WP_014725409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751726.1;locus_tag=LDO38_RS03940;product=hypothetical protein;protein_id=WP_014725409.1;transl_table=11 NZ_CAJZAL010000032.1 RefSeq gene 1592 3238 . + . ID=gene-LDO38_RS03945;Name=LDO38_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03945;old_locus_tag=BVI2075_1270003 NZ_CAJZAL010000032.1 Protein Homology CDS 1592 3238 . + 0 ID=cds-WP_011882616.1;Parent=gene-LDO38_RS03945;Dbxref=GenBank:WP_011882616.1;Name=WP_011882616.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498988.1;locus_tag=LDO38_RS03945;product=Nramp family divalent metal transporter;protein_id=WP_011882616.1;transl_table=11 NZ_CAJZAL010000032.1 RefSeq gene 3346 4254 . - . ID=gene-LDO38_RS03950;Name=LDO38_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03950;old_locus_tag=BVI2075_1270004 NZ_CAJZAL010000032.1 Protein Homology CDS 3346 4254 . - 0 ID=cds-WP_011882615.1;Parent=gene-LDO38_RS03950;Dbxref=GenBank:WP_011882615.1;Name=WP_011882615.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354463.1;locus_tag=LDO38_RS03950;product=helix-turn-helix transcriptional regulator;protein_id=WP_011882615.1;transl_table=11 NZ_CAJZAL010000032.1 RefSeq gene 4534 5367 . + . ID=gene-LDO38_RS03955;Name=LDO38_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03955;old_locus_tag=BVI2075_1270007 NZ_CAJZAL010000032.1 Protein Homology CDS 4534 5367 . + 0 ID=cds-WP_011882614.1;Parent=gene-LDO38_RS03955;Dbxref=GenBank:WP_011882614.1;Name=WP_011882614.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216594.1;locus_tag=LDO38_RS03955;product=helix-turn-helix transcriptional regulator;protein_id=WP_011882614.1;transl_table=11 NZ_CAJZAL010000032.1 RefSeq gene 5615 7816 . + . ID=gene-LDO38_RS03960;Name=sctV;gbkey=Gene;gene=sctV;gene_biotype=protein_coding;locus_tag=LDO38_RS03960;old_locus_tag=BVI2075_1270008 NZ_CAJZAL010000032.1 Protein Homology CDS 5615 7816 . + 0 ID=cds-WP_043292482.1;Parent=gene-LDO38_RS03960;Dbxref=GenBank:WP_043292482.1;Name=WP_043292482.1;Ontology_term=GO:0015031,GO:0016020;gbkey=CDS;gene=sctV;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366496.1;locus_tag=LDO38_RS03960;product=type III secretion system export apparatus subunit SctV;protein_id=WP_043292482.1;transl_table=11 NZ_CAJZAL010000032.1 RefSeq gene 7813 8091 . + . ID=gene-LDO38_RS03965;Name=sctS;gbkey=Gene;gene=sctS;gene_biotype=protein_coding;locus_tag=LDO38_RS03965;old_locus_tag=BVI2075_1270009 NZ_CAJZAL010000032.1 Protein Homology CDS 7813 8091 . + 0 ID=cds-WP_014725405.1;Parent=gene-LDO38_RS03965;Dbxref=GenBank:WP_014725405.1;Name=WP_014725405.1;Ontology_term=GO:0009306,GO:0030254,GO:0016020;gbkey=CDS;gene=sctS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA,protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751731.1;locus_tag=LDO38_RS03965;product=type III secretion system export apparatus subunit SctS;protein_id=WP_014725405.1;transl_table=11 NZ_CAJZAL010000032.1 RefSeq gene 8091 10130 . + . ID=gene-LDO38_RS03970;Name=sctC;gbkey=Gene;gene=sctC;gene_biotype=protein_coding;locus_tag=LDO38_RS03970;old_locus_tag=BVI2075_1270010 NZ_CAJZAL010000032.1 Protein Homology CDS 8091 10130 . + 0 ID=cds-WP_059456032.1;Parent=gene-LDO38_RS03970;Dbxref=GenBank:WP_059456032.1;Name=WP_059456032.1;Ontology_term=GO:0009306;gbkey=CDS;gene=sctC;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216596.1;locus_tag=LDO38_RS03970;product=type III secretion system outer membrane ring subunit SctC;protein_id=WP_059456032.1;transl_table=11 NZ_CAJZAL010000032.1 RefSeq gene 10111 11523 . + . ID=gene-LDO38_RS03975;Name=sctD;gbkey=Gene;gene=sctD;gene_biotype=protein_coding;locus_tag=LDO38_RS03975;old_locus_tag=BVI2075_1270011 NZ_CAJZAL010000032.1 Protein Homology CDS 10111 11523 . + 0 ID=cds-WP_059475288.1;Parent=gene-LDO38_RS03975;Dbxref=GenBank:WP_059475288.1;Name=WP_059475288.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctD;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882610.1;locus_tag=LDO38_RS03975;product=type III secretion system inner membrane ring subunit SctD;protein_id=WP_059475288.1;transl_table=11 NZ_CAJZAL010000032.1 RefSeq gene 11663 11872 . + . ID=gene-LDO38_RS03980;Name=LDO38_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03980;old_locus_tag=BVI2075_1270012 NZ_CAJZAL010000032.1 Protein Homology CDS 11663 11872 . + 0 ID=cds-WP_011882609.1;Parent=gene-LDO38_RS03980;Dbxref=GenBank:WP_011882609.1;Name=WP_011882609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480857.1;locus_tag=LDO38_RS03980;product=hypothetical protein;protein_id=WP_011882609.1;transl_table=11 ##sequence-region NZ_CAJZAL010000033.1 1 39655 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000033.1 RefSeq region 1 39655 . + . ID=NZ_CAJZAL010000033.1:1..39655;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_128 NZ_CAJZAL010000033.1 RefSeq gene 539 1009 . + . ID=gene-LDO38_RS03985;Name=LDO38_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03985;old_locus_tag=BVI2075_1280002 NZ_CAJZAL010000033.1 Protein Homology CDS 539 1009 . + 0 ID=cds-WP_034194390.1;Parent=gene-LDO38_RS03985;Dbxref=GenBank:WP_034194390.1;Name=WP_034194390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480968.1;locus_tag=LDO38_RS03985;product=ATPase;protein_id=WP_034194390.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 1167 1850 . - . ID=gene-LDO38_RS03990;Name=LDO38_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03990;old_locus_tag=BVI2075_1280004 NZ_CAJZAL010000033.1 Protein Homology CDS 1167 1850 . - 0 ID=cds-WP_059463353.1;Parent=gene-LDO38_RS03990;Dbxref=GenBank:WP_059463353.1;Name=WP_059463353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372099.1;locus_tag=LDO38_RS03990;product=DUF429 domain-containing protein;protein_id=WP_059463353.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 1860 2384 . - . ID=gene-LDO38_RS03995;Name=LDO38_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS03995;old_locus_tag=BVI2075_1280005 NZ_CAJZAL010000033.1 Protein Homology CDS 1860 2384 . - 0 ID=cds-WP_059738834.1;Parent=gene-LDO38_RS03995;Dbxref=GenBank:WP_059738834.1;Name=WP_059738834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217790.1;locus_tag=LDO38_RS03995;product=HD domain-containing protein;protein_id=WP_059738834.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 2503 5973 . - . ID=gene-LDO38_RS04000;Name=LDO38_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04000;old_locus_tag=BVI2075_1280006 NZ_CAJZAL010000033.1 Protein Homology CDS 2503 5973 . - 0 ID=cds-WP_126221051.1;Parent=gene-LDO38_RS04000;Dbxref=GenBank:WP_126221051.1;Name=WP_126221051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217789.1;locus_tag=LDO38_RS04000;product=ATP-binding protein;protein_id=WP_126221051.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 5977 7227 . - . ID=gene-LDO38_RS04005;Name=LDO38_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04005;old_locus_tag=BVI2075_1280007 NZ_CAJZAL010000033.1 Protein Homology CDS 5977 7227 . - 0 ID=cds-WP_014725514.1;Parent=gene-LDO38_RS04005;Dbxref=GenBank:WP_014725514.1;Name=WP_014725514.1;Ontology_term=GO:0003677,GO:0042578,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405536.1;locus_tag=LDO38_RS04005;product=metallophosphoesterase family protein;protein_id=WP_014725514.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 7944 8483 . - . ID=gene-LDO38_RS04010;Name=LDO38_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04010;old_locus_tag=BVI2075_1280008 NZ_CAJZAL010000033.1 Protein Homology CDS 7944 8483 . - 0 ID=cds-WP_059559870.1;Parent=gene-LDO38_RS04010;Dbxref=GenBank:WP_059559870.1;Name=WP_059559870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549383.1;locus_tag=LDO38_RS04010;product=hypothetical protein;protein_id=WP_059559870.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 8650 8820 . + . ID=gene-LDO38_RS04015;Name=LDO38_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04015;old_locus_tag=BVI2075_1280009 NZ_CAJZAL010000033.1 GeneMarkS-2+ CDS 8650 8820 . + 0 ID=cds-WP_155624560.1;Parent=gene-LDO38_RS04015;Dbxref=GenBank:WP_155624560.1;Name=WP_155624560.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS04015;product=hypothetical protein;protein_id=WP_155624560.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 8912 9850 . + . ID=gene-LDO38_RS04020;Name=LDO38_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04020;old_locus_tag=BVI2075_1280010 NZ_CAJZAL010000033.1 Protein Homology CDS 8912 9850 . + 0 ID=cds-WP_224056199.1;Parent=gene-LDO38_RS04020;Dbxref=GenBank:WP_224056199.1;Name=WP_224056199.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217786.1;locus_tag=LDO38_RS04020;product=tyrosine-type recombinase/integrase;protein_id=WP_224056199.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 9885 10364 . - . ID=gene-LDO38_RS04025;Name=LDO38_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04025;old_locus_tag=BVI2075_1280011 NZ_CAJZAL010000033.1 Protein Homology CDS 9885 10364 . - 0 ID=cds-WP_059461875.1;Parent=gene-LDO38_RS04025;Dbxref=GenBank:WP_059461875.1;Name=WP_059461875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372112.1;locus_tag=LDO38_RS04025;product=RES family NAD+ phosphorylase;protein_id=WP_059461875.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 10361 10816 . - . ID=gene-LDO38_RS04030;Name=parS;gbkey=Gene;gene=parS;gene_biotype=protein_coding;locus_tag=LDO38_RS04030;old_locus_tag=BVI2075_1280012 NZ_CAJZAL010000033.1 Protein Homology CDS 10361 10816 . - 0 ID=cds-WP_059461874.1;Parent=gene-LDO38_RS04030;Dbxref=GenBank:WP_059461874.1;Name=WP_059461874.1;Ontology_term=GO:0110001;gbkey=CDS;gene=parS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767020.1;locus_tag=LDO38_RS04030;product=type II RES/Xre toxin-antitoxin system antitoxin;protein_id=WP_059461874.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 11693 12004 . + . ID=gene-LDO38_RS04035;Name=LDO38_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04035;old_locus_tag=BVI2075_1280013 NZ_CAJZAL010000033.1 Protein Homology CDS 11693 12004 . + 0 ID=cds-WP_059461873.1;Parent=gene-LDO38_RS04035;Dbxref=GenBank:WP_059461873.1;Name=WP_059461873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337171.1;locus_tag=LDO38_RS04035;product=DUF4148 domain-containing protein;protein_id=WP_059461873.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 12267 12974 . + . ID=gene-LDO38_RS04040;Name=LDO38_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04040;old_locus_tag=BVI2075_1280014 NZ_CAJZAL010000033.1 Protein Homology CDS 12267 12974 . + 0 ID=cds-WP_041494334.1;Parent=gene-LDO38_RS04040;Dbxref=GenBank:WP_041494334.1;Name=WP_041494334.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879648.1;locus_tag=LDO38_RS04040;product=dienelactone hydrolase family protein;protein_id=WP_041494334.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 13287 14228 . - . ID=gene-LDO38_RS04045;Name=LDO38_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04045;old_locus_tag=BVI2075_1280016 NZ_CAJZAL010000033.1 Protein Homology CDS 13287 14228 . - 0 ID=cds-WP_014725508.1;Parent=gene-LDO38_RS04045;Dbxref=GenBank:WP_014725508.1;Name=WP_014725508.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660882.1;locus_tag=LDO38_RS04045;product=LysR family transcriptional regulator;protein_id=WP_014725508.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 14469 15764 . - . ID=gene-LDO38_RS04050;Name=LDO38_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04050;old_locus_tag=BVI2075_1280017 NZ_CAJZAL010000033.1 Protein Homology CDS 14469 15764 . - 0 ID=cds-WP_060121329.1;Parent=gene-LDO38_RS04050;Dbxref=GenBank:WP_060121329.1;Name=WP_060121329.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879646.1;locus_tag=LDO38_RS04050;product=adenylosuccinate synthase;protein_id=WP_060121329.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 15904 16809 . + . ID=gene-LDO38_RS04055;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=LDO38_RS04055;old_locus_tag=BVI2075_1280018 NZ_CAJZAL010000033.1 Protein Homology CDS 15904 16809 . + 0 ID=cds-WP_059463359.1;Parent=gene-LDO38_RS04055;Dbxref=GenBank:WP_059463359.1;Name=WP_059463359.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=gcvA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489079.1;locus_tag=LDO38_RS04055;product=transcriptional regulator GcvA;protein_id=WP_059463359.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 17026 17352 . - . ID=gene-LDO38_RS04060;Name=LDO38_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04060;old_locus_tag=BVI2075_1280019 NZ_CAJZAL010000033.1 Protein Homology CDS 17026 17352 . - 0 ID=cds-WP_011879644.1;Parent=gene-LDO38_RS04060;Dbxref=GenBank:WP_011879644.1;Name=WP_011879644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759642.1;locus_tag=LDO38_RS04060;product=hypothetical protein;protein_id=WP_011879644.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 19702 21018 . + . ID=gene-LDO38_RS04065;Name=LDO38_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04065;old_locus_tag=BVI2075_1280022 NZ_CAJZAL010000033.1 Protein Homology CDS 19702 21018 . + 0 ID=cds-WP_011879642.1;Parent=gene-LDO38_RS04065;Dbxref=GenBank:WP_011879642.1;Name=WP_011879642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753023.1;locus_tag=LDO38_RS04065;product=replication initiation protein;protein_id=WP_011879642.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 21108 22139 . - . ID=gene-LDO38_RS04070;Name=LDO38_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04070;old_locus_tag=BVI2075_1280023 NZ_CAJZAL010000033.1 Protein Homology CDS 21108 22139 . - 0 ID=cds-WP_014725505.1;Parent=gene-LDO38_RS04070;Dbxref=GenBank:WP_014725505.1;Name=WP_014725505.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660886.1;locus_tag=LDO38_RS04070;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_014725505.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 22132 22827 . - . ID=gene-LDO38_RS04075;Name=LDO38_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04075;old_locus_tag=BVI2075_1280024 NZ_CAJZAL010000033.1 Protein Homology CDS 22132 22827 . - 0 ID=cds-WP_014725504.1;Parent=gene-LDO38_RS04075;Dbxref=GenBank:WP_014725504.1;Name=WP_014725504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399349.1;locus_tag=LDO38_RS04075;product=ParA family protein;protein_id=WP_014725504.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 24269 25393 . - . ID=gene-LDO38_RS04080;Name=LDO38_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04080;old_locus_tag=BVI2075_1280027 NZ_CAJZAL010000033.1 Protein Homology CDS 24269 25393 . - 0 ID=cds-WP_224056200.1;Parent=gene-LDO38_RS04080;Dbxref=GenBank:WP_224056200.1;Name=WP_224056200.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497841.1;locus_tag=LDO38_RS04080;product=MBL fold metallo-hydrolase;protein_id=WP_224056200.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 25478 26131 . + . ID=gene-LDO38_RS04085;Name=LDO38_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04085;old_locus_tag=BVI2075_1280028 NZ_CAJZAL010000033.1 Protein Homology CDS 25478 26131 . + 0 ID=cds-WP_014725502.1;Parent=gene-LDO38_RS04085;Dbxref=GenBank:WP_014725502.1;Name=WP_014725502.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879637.1;locus_tag=LDO38_RS04085;product=TetR/AcrR family transcriptional regulator;protein_id=WP_014725502.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 26259 26750 . + . ID=gene-LDO38_RS04090;Name=LDO38_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04090;old_locus_tag=BVI2075_1280029 NZ_CAJZAL010000033.1 Protein Homology CDS 26259 26750 . + 0 ID=cds-WP_011879636.1;Parent=gene-LDO38_RS04090;Dbxref=GenBank:WP_011879636.1;Name=WP_011879636.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335397.1;locus_tag=LDO38_RS04090;product=flavodoxin family protein;protein_id=WP_011879636.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 27548 28216 . + . ID=gene-LDO38_RS04095;Name=LDO38_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04095;old_locus_tag=BVI2075_1280030 NZ_CAJZAL010000033.1 Protein Homology CDS 27548 28216 . + 0 ID=cds-WP_059461869.1;Parent=gene-LDO38_RS04095;Dbxref=GenBank:WP_059461869.1;Name=WP_059461869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489074.1;locus_tag=LDO38_RS04095;product=ProQ/FINO family protein;protein_id=WP_059461869.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 28676 29035 . - . ID=gene-LDO38_RS04100;Name=LDO38_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04100 NZ_CAJZAL010000033.1 GeneMarkS-2+ CDS 28676 29035 . - 0 ID=cds-WP_126221045.1;Parent=gene-LDO38_RS04100;Dbxref=GenBank:WP_126221045.1;Name=WP_126221045.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS04100;product=hypothetical protein;protein_id=WP_126221045.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 29063 30124 . + . ID=gene-LDO38_RS04105;Name=LDO38_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04105;old_locus_tag=BVI2075_1280031 NZ_CAJZAL010000033.1 Protein Homology CDS 29063 30124 . + 0 ID=cds-WP_014725499.1;Parent=gene-LDO38_RS04105;Dbxref=GenBank:WP_014725499.1;Name=WP_014725499.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489069.1;locus_tag=LDO38_RS04105;product=DMT family transporter;protein_id=WP_014725499.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 30412 30837 . - . ID=gene-LDO38_RS04110;Name=LDO38_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04110;old_locus_tag=BVI2075_1280033 NZ_CAJZAL010000033.1 Protein Homology CDS 30412 30837 . - 0 ID=cds-WP_034194406.1;Parent=gene-LDO38_RS04110;Dbxref=GenBank:WP_034194406.1;Name=WP_034194406.1;Ontology_term=GO:0015689;gbkey=CDS;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879630.1;locus_tag=LDO38_RS04110;product=TOBE domain-containing protein;protein_id=WP_034194406.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 31036 32559 . - . ID=gene-LDO38_RS04115;Name=LDO38_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04115;old_locus_tag=BVI2075_1280034 NZ_CAJZAL010000033.1 Protein Homology CDS 31036 32559 . - 0 ID=cds-WP_014725497.1;Parent=gene-LDO38_RS04115;Dbxref=GenBank:WP_014725497.1;Name=WP_014725497.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725497.1;locus_tag=LDO38_RS04115;product=efflux transporter outer membrane subunit;protein_id=WP_014725497.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 32556 33494 . - . ID=gene-LDO38_RS04120;Name=LDO38_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04120;old_locus_tag=BVI2075_1280035 NZ_CAJZAL010000033.1 Protein Homology CDS 32556 33494 . - 0 ID=cds-WP_034194408.1;Parent=gene-LDO38_RS04120;Dbxref=GenBank:WP_034194408.1;Name=WP_034194408.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337147.1;locus_tag=LDO38_RS04120;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_034194408.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 33497 33709 . - . ID=gene-LDO38_RS04125;Name=LDO38_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04125;old_locus_tag=BVI2075_1280036 NZ_CAJZAL010000033.1 Protein Homology CDS 33497 33709 . - 0 ID=cds-WP_011879627.1;Parent=gene-LDO38_RS04125;Dbxref=GenBank:WP_011879627.1;Name=WP_011879627.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481008.1;locus_tag=LDO38_RS04125;product=DUF1656 domain-containing protein;protein_id=WP_011879627.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 33744 35888 . - . ID=gene-LDO38_RS04130;Name=LDO38_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04130;old_locus_tag=BVI2075_1280037 NZ_CAJZAL010000033.1 Protein Homology CDS 33744 35888 . - 0 ID=cds-WP_045579905.1;Parent=gene-LDO38_RS04130;Dbxref=GenBank:WP_045579905.1;Name=WP_045579905.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399334.1;locus_tag=LDO38_RS04130;product=FUSC family protein;protein_id=WP_045579905.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 35885 36364 . - . ID=gene-LDO38_RS04135;Name=LDO38_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04135;old_locus_tag=BVI2075_1280038 NZ_CAJZAL010000033.1 Protein Homology CDS 35885 36364 . - 0 ID=cds-WP_059581321.1;Parent=gene-LDO38_RS04135;Dbxref=GenBank:WP_059581321.1;Name=WP_059581321.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481010.1;locus_tag=LDO38_RS04135;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_059581321.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 36730 38142 . + . ID=gene-LDO38_RS04140;Name=LDO38_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04140;old_locus_tag=BVI2075_1280039 NZ_CAJZAL010000033.1 Protein Homology CDS 36730 38142 . + 0 ID=cds-WP_224056201.1;Parent=gene-LDO38_RS04140;Dbxref=GenBank:WP_224056201.1;Name=WP_224056201.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879624.1;locus_tag=LDO38_RS04140;product=PLP-dependent aminotransferase family protein;protein_id=WP_224056201.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq gene 38276 39247 . + . ID=gene-LDO38_RS04145;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=LDO38_RS04145;old_locus_tag=BVI2075_1280040 NZ_CAJZAL010000033.1 Protein Homology CDS 38276 39247 . + 0 ID=cds-WP_059463365.1;Parent=gene-LDO38_RS04145;Dbxref=GenBank:WP_059463365.1;Name=WP_059463365.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372136.1;locus_tag=LDO38_RS04145;product=hydroxyectoine utilization dehydratase EutB;protein_id=WP_059463365.1;transl_table=11 NZ_CAJZAL010000033.1 RefSeq pseudogene 39249 39655 . + . ID=gene-LDO38_RS04150;Name=LDO38_RS04150;end_range=39655,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS04150;partial=true;pseudo=true NZ_CAJZAL010000033.1 Protein Homology CDS 39249 39655 . + 0 ID=cds-LDO38_RS04150;Parent=gene-LDO38_RS04150;Note=cyclodeaminase%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=39655,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416307.1;locus_tag=LDO38_RS04150;partial=true;product=ornithine cyclodeaminase family protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000034.1 1 18509 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000034.1 RefSeq region 1 18509 . + . ID=NZ_CAJZAL010000034.1:1..18509;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_129 NZ_CAJZAL010000034.1 RefSeq gene 1 808 . + . ID=gene-LDO38_RS04155;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=LDO38_RS04155;old_locus_tag=BVI2075_1290001;partial=true;start_range=.,1 NZ_CAJZAL010000034.1 Protein Homology CDS 1 808 . + 1 ID=cds-WP_224056202.1;Parent=gene-LDO38_RS04155;Dbxref=GenBank:WP_224056202.1;Name=WP_224056202.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884034.1;locus_tag=LDO38_RS04155;partial=true;product=succinylglutamate desuccinylase;protein_id=WP_224056202.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000034.1 RefSeq gene 1045 1839 . + . ID=gene-LDO38_RS04160;Name=LDO38_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04160;old_locus_tag=BVI2075_1290002 NZ_CAJZAL010000034.1 Protein Homology CDS 1045 1839 . + 0 ID=cds-WP_011884036.1;Parent=gene-LDO38_RS04160;Dbxref=GenBank:WP_011884036.1;Name=WP_011884036.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025859.1;locus_tag=LDO38_RS04160;product=ABC transporter substrate-binding protein;protein_id=WP_011884036.1;transl_table=11 NZ_CAJZAL010000034.1 RefSeq gene 1927 3459 . - . ID=gene-LDO38_RS04165;Name=LDO38_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04165;old_locus_tag=BVI2075_1290003 NZ_CAJZAL010000034.1 Protein Homology CDS 1927 3459 . - 0 ID=cds-WP_011884038.1;Parent=gene-LDO38_RS04165;Dbxref=GenBank:WP_011884038.1;Name=WP_011884038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884038.1;locus_tag=LDO38_RS04165;product=HDOD domain-containing protein;protein_id=WP_011884038.1;transl_table=11 NZ_CAJZAL010000034.1 RefSeq gene 3489 5228 . - . ID=gene-LDO38_RS04170;Name=cdpA;gbkey=Gene;gene=cdpA;gene_biotype=protein_coding;locus_tag=LDO38_RS04170;old_locus_tag=BVI2075_1290004 NZ_CAJZAL010000034.1 Protein Homology CDS 3489 5228 . - 0 ID=cds-WP_196480377.1;Parent=gene-LDO38_RS04170;Dbxref=GenBank:WP_196480377.1;Name=WP_196480377.1;gbkey=CDS;gene=cdpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544994.1;locus_tag=LDO38_RS04170;product=cyclic di-GMP phosphodiesterase CdpA;protein_id=WP_196480377.1;transl_table=11 NZ_CAJZAL010000034.1 RefSeq gene 5508 6059 . + . ID=gene-LDO38_RS04175;Name=LDO38_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04175;old_locus_tag=BVI2075_1290006 NZ_CAJZAL010000034.1 Protein Homology CDS 5508 6059 . + 0 ID=cds-WP_069246188.1;Parent=gene-LDO38_RS04175;Dbxref=GenBank:WP_069246188.1;Name=WP_069246188.1;Ontology_term=GO:0008379,GO:0051920;gbkey=CDS;go_function=thioredoxin peroxidase activity|0008379||IEA,peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897592.1;locus_tag=LDO38_RS04175;product=peroxiredoxin;protein_id=WP_069246188.1;transl_table=11 NZ_CAJZAL010000034.1 RefSeq gene 6264 6893 . - . ID=gene-LDO38_RS04180;Name=LDO38_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04180;old_locus_tag=BVI2075_1290007 NZ_CAJZAL010000034.1 Protein Homology CDS 6264 6893 . - 0 ID=cds-WP_014722761.1;Parent=gene-LDO38_RS04180;Dbxref=GenBank:WP_014722761.1;Name=WP_014722761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521880.1;locus_tag=LDO38_RS04180;product=SDR family oxidoreductase;protein_id=WP_014722761.1;transl_table=11 NZ_CAJZAL010000034.1 RefSeq gene 7157 8665 . + . ID=gene-LDO38_RS04185;Name=LDO38_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04185;old_locus_tag=BVI2075_1290008 NZ_CAJZAL010000034.1 Protein Homology CDS 7157 8665 . + 0 ID=cds-WP_069246189.1;Parent=gene-LDO38_RS04185;Dbxref=GenBank:WP_069246189.1;Name=WP_069246189.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328187.1;locus_tag=LDO38_RS04185;product=NYN domain-containing protein;protein_id=WP_069246189.1;transl_table=11 NZ_CAJZAL010000034.1 RefSeq gene 8991 12299 . - . ID=gene-LDO38_RS04190;Name=LDO38_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04190;old_locus_tag=BVI2075_1290009 NZ_CAJZAL010000034.1 Protein Homology CDS 8991 12299 . - 0 ID=cds-WP_059475883.1;Parent=gene-LDO38_RS04190;Dbxref=GenBank:WP_059475883.1;Name=WP_059475883.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897587.1;locus_tag=LDO38_RS04190;product=efflux RND transporter permease subunit;protein_id=WP_059475883.1;transl_table=11 NZ_CAJZAL010000034.1 RefSeq gene 12303 15416 . - . ID=gene-LDO38_RS04195;Name=LDO38_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04195;old_locus_tag=BVI2075_1290010 NZ_CAJZAL010000034.1 Protein Homology CDS 12303 15416 . - 0 ID=cds-WP_059462928.1;Parent=gene-LDO38_RS04195;Dbxref=GenBank:WP_059462928.1;Name=WP_059462928.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401193.1;locus_tag=LDO38_RS04195;product=MdtB/MuxB family multidrug efflux RND transporter permease subunit;protein_id=WP_059462928.1;transl_table=11 NZ_CAJZAL010000034.1 RefSeq gene 15432 16835 . - . ID=gene-LDO38_RS04200;Name=LDO38_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04200;old_locus_tag=BVI2075_1290011 NZ_CAJZAL010000034.1 Protein Homology CDS 15432 16835 . - 0 ID=cds-WP_045579498.1;Parent=gene-LDO38_RS04200;Dbxref=GenBank:WP_045579498.1;Name=WP_045579498.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884052.1;locus_tag=LDO38_RS04200;product=MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit;protein_id=WP_045579498.1;transl_table=11 NZ_CAJZAL010000034.1 RefSeq gene 17124 17948 . - . ID=gene-LDO38_RS04205;Name=LDO38_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04205;old_locus_tag=BVI2075_1290012 NZ_CAJZAL010000034.1 Protein Homology CDS 17124 17948 . - 0 ID=cds-WP_011884053.1;Parent=gene-LDO38_RS04205;Dbxref=GenBank:WP_011884053.1;Name=WP_011884053.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884053.1;locus_tag=LDO38_RS04205;product=IclR family transcriptional regulator;protein_id=WP_011884053.1;transl_table=11 ##sequence-region NZ_CAJZAL010000035.1 1 23235 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000035.1 RefSeq region 1 23235 . + . ID=NZ_CAJZAL010000035.1:1..23235;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_13 NZ_CAJZAL010000035.1 RefSeq gene 1 305 . + . ID=gene-LDO38_RS04210;Name=LDO38_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04210;old_locus_tag=BVI2075_130001;partial=true;start_range=.,1 NZ_CAJZAL010000035.1 Protein Homology CDS 1 305 . + 2 ID=cds-WP_224056203.1;Parent=gene-LDO38_RS04210;Dbxref=GenBank:WP_224056203.1;Name=WP_224056203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396447.1;locus_tag=LDO38_RS04210;partial=true;product=DUF2000 domain-containing protein;protein_id=WP_224056203.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000035.1 RefSeq gene 337 687 . - . ID=gene-LDO38_RS04215;Name=LDO38_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04215;old_locus_tag=BVI2075_130002 NZ_CAJZAL010000035.1 Protein Homology CDS 337 687 . - 0 ID=cds-WP_011880721.1;Parent=gene-LDO38_RS04215;Dbxref=GenBank:WP_011880721.1;Name=WP_011880721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484732.1;locus_tag=LDO38_RS04215;product=VOC family protein;protein_id=WP_011880721.1;transl_table=11 NZ_CAJZAL010000035.1 RefSeq gene 779 1480 . - . ID=gene-LDO38_RS04220;Name=LDO38_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04220;old_locus_tag=BVI2075_130003 NZ_CAJZAL010000035.1 Protein Homology CDS 779 1480 . - 0 ID=cds-WP_011880722.1;Parent=gene-LDO38_RS04220;Dbxref=GenBank:WP_011880722.1;Name=WP_011880722.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006161614.1;locus_tag=LDO38_RS04220;product=ABC transporter ATP-binding protein;protein_id=WP_011880722.1;transl_table=11 NZ_CAJZAL010000035.1 RefSeq gene 1480 2253 . - . ID=gene-LDO38_RS04225;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=LDO38_RS04225;old_locus_tag=BVI2075_130004 NZ_CAJZAL010000035.1 Protein Homology CDS 1480 2253 . - 0 ID=cds-WP_011880723.1;Parent=gene-LDO38_RS04225;Dbxref=GenBank:WP_011880723.1;Name=WP_011880723.1;Ontology_term=GO:0005524;gbkey=CDS;gene=livG;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396442.1;locus_tag=LDO38_RS04225;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_011880723.1;transl_table=11 NZ_CAJZAL010000035.1 RefSeq gene 2250 3521 . - . ID=gene-LDO38_RS04230;Name=LDO38_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04230;old_locus_tag=BVI2075_130005 NZ_CAJZAL010000035.1 Protein Homology CDS 2250 3521 . - 0 ID=cds-WP_059460590.1;Parent=gene-LDO38_RS04230;Dbxref=GenBank:WP_059460590.1;Name=WP_059460590.1;Ontology_term=GO:0015658,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089869.1;locus_tag=LDO38_RS04230;product=high-affinity branched-chain amino acid ABC transporter permease LivM;protein_id=WP_059460590.1;transl_table=11 NZ_CAJZAL010000035.1 RefSeq gene 3533 4459 . - . ID=gene-LDO38_RS04235;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=LDO38_RS04235;old_locus_tag=BVI2075_130006 NZ_CAJZAL010000035.1 Protein Homology CDS 3533 4459 . - 0 ID=cds-WP_011880725.1;Parent=gene-LDO38_RS04235;Dbxref=GenBank:WP_011880725.1;Name=WP_011880725.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523160.1;locus_tag=LDO38_RS04235;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_011880725.1;transl_table=11 NZ_CAJZAL010000035.1 RefSeq gene 4662 5780 . - . ID=gene-LDO38_RS04240;Name=LDO38_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04240;old_locus_tag=BVI2075_130007 NZ_CAJZAL010000035.1 Protein Homology CDS 4662 5780 . - 0 ID=cds-WP_034195540.1;Parent=gene-LDO38_RS04240;Dbxref=GenBank:WP_034195540.1;Name=WP_034195540.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009907961.1;locus_tag=LDO38_RS04240;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_034195540.1;transl_table=11 NZ_CAJZAL010000035.1 RefSeq gene 6759 7124 . + . ID=gene-LDO38_RS04245;Name=LDO38_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04245;old_locus_tag=BVI2075_130008 NZ_CAJZAL010000035.1 GeneMarkS-2+ CDS 6759 7124 . + 0 ID=cds-WP_224056204.1;Parent=gene-LDO38_RS04245;Dbxref=GenBank:WP_224056204.1;Name=WP_224056204.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS04245;product=hypothetical protein;protein_id=WP_224056204.1;transl_table=11 NZ_CAJZAL010000035.1 RefSeq gene 7187 7684 . - . ID=gene-LDO38_RS04250;Name=LDO38_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04250;old_locus_tag=BVI2075_130009 NZ_CAJZAL010000035.1 Protein Homology CDS 7187 7684 . - 0 ID=cds-WP_011880728.1;Parent=gene-LDO38_RS04250;Dbxref=GenBank:WP_011880728.1;Name=WP_011880728.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493518.1;locus_tag=LDO38_RS04250;product=PIN domain-containing protein;protein_id=WP_011880728.1;transl_table=11 NZ_CAJZAL010000035.1 RefSeq gene 7681 8853 . - . ID=gene-LDO38_RS04255;Name=LDO38_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04255;old_locus_tag=BVI2075_130010 NZ_CAJZAL010000035.1 Protein Homology CDS 7681 8853 . - 0 ID=cds-WP_011880729.1;Parent=gene-LDO38_RS04255;Dbxref=GenBank:WP_011880729.1;Name=WP_011880729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484766.1;locus_tag=LDO38_RS04255;product=XRE family transcriptional regulator;protein_id=WP_011880729.1;transl_table=11 NZ_CAJZAL010000035.1 RefSeq gene 9246 10487 . + . ID=gene-LDO38_RS04260;Name=LDO38_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04260;old_locus_tag=BVI2075_130012 NZ_CAJZAL010000035.1 Protein Homology CDS 9246 10487 . + 0 ID=cds-WP_014723941.1;Parent=gene-LDO38_RS04260;Dbxref=GenBank:WP_014723941.1;Name=WP_014723941.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414028.1;locus_tag=LDO38_RS04260;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_014723941.1;transl_table=11 NZ_CAJZAL010000035.1 RefSeq gene 10504 11265 . - . ID=gene-LDO38_RS04265;Name=LDO38_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04265;old_locus_tag=BVI2075_130013 NZ_CAJZAL010000035.1 Protein Homology CDS 10504 11265 . - 0 ID=cds-WP_069246429.1;Parent=gene-LDO38_RS04265;Dbxref=GenBank:WP_069246429.1;Name=WP_069246429.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756124.1;locus_tag=LDO38_RS04265;product=FadR/GntR family transcriptional regulator;protein_id=WP_069246429.1;transl_table=11 NZ_CAJZAL010000035.1 RefSeq gene 11337 12227 . - . ID=gene-LDO38_RS04270;Name=LDO38_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04270;old_locus_tag=BVI2075_130014 NZ_CAJZAL010000035.1 Protein Homology CDS 11337 12227 . - 0 ID=cds-WP_059739107.1;Parent=gene-LDO38_RS04270;Dbxref=GenBank:WP_059739107.1;Name=WP_059739107.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547138.1;locus_tag=LDO38_RS04270;product=amidohydrolase family protein;protein_id=WP_059739107.1;transl_table=11 NZ_CAJZAL010000035.1 RefSeq gene 12291 13232 . - . ID=gene-LDO38_RS04275;Name=LDO38_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04275;old_locus_tag=BVI2075_130015 NZ_CAJZAL010000035.1 Protein Homology CDS 12291 13232 . - 0 ID=cds-WP_011880733.1;Parent=gene-LDO38_RS04275;Dbxref=GenBank:WP_011880733.1;Name=WP_011880733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339568.1;locus_tag=LDO38_RS04275;product=ABC transporter substrate-binding protein;protein_id=WP_011880733.1;transl_table=11 NZ_CAJZAL010000035.1 RefSeq gene 13322 14359 . - . ID=gene-LDO38_RS04280;Name=LDO38_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04280;old_locus_tag=BVI2075_130016 NZ_CAJZAL010000035.1 Protein Homology CDS 13322 14359 . - 0 ID=cds-WP_011880734.1;Parent=gene-LDO38_RS04280;Dbxref=GenBank:WP_011880734.1;Name=WP_011880734.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498773.1;locus_tag=LDO38_RS04280;product=ABC transporter permease;protein_id=WP_011880734.1;transl_table=11 NZ_CAJZAL010000035.1 RefSeq gene 14380 15918 . - . ID=gene-LDO38_RS04285;Name=LDO38_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04285;old_locus_tag=BVI2075_130017 NZ_CAJZAL010000035.1 Protein Homology CDS 14380 15918 . - 0 ID=cds-WP_014723944.1;Parent=gene-LDO38_RS04285;Dbxref=GenBank:WP_014723944.1;Name=WP_014723944.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898578.1;locus_tag=LDO38_RS04285;product=sugar ABC transporter ATP-binding protein;protein_id=WP_014723944.1;transl_table=11 NZ_CAJZAL010000035.1 RefSeq gene 15931 16707 . - . ID=gene-LDO38_RS04290;Name=LDO38_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04290;old_locus_tag=BVI2075_130018 NZ_CAJZAL010000035.1 Protein Homology CDS 15931 16707 . - 0 ID=cds-WP_011880736.1;Parent=gene-LDO38_RS04290;Dbxref=GenBank:WP_011880736.1;Name=WP_011880736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880736.1;locus_tag=LDO38_RS04290;product=SDR family oxidoreductase;protein_id=WP_011880736.1;transl_table=11 NZ_CAJZAL010000035.1 RefSeq gene 16791 18068 . - . ID=gene-LDO38_RS04295;Name=LDO38_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04295;old_locus_tag=BVI2075_130019 NZ_CAJZAL010000035.1 Protein Homology CDS 16791 18068 . - 0 ID=cds-WP_014723945.1;Parent=gene-LDO38_RS04295;Dbxref=GenBank:WP_014723945.1;Name=WP_014723945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766342.1;locus_tag=LDO38_RS04295;product=L-fuconate dehydratase;protein_id=WP_014723945.1;transl_table=11 NZ_CAJZAL010000035.1 RefSeq gene 18092 18934 . - . ID=gene-LDO38_RS04300;Name=LDO38_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04300;old_locus_tag=BVI2075_130020 NZ_CAJZAL010000035.1 Protein Homology CDS 18092 18934 . - 0 ID=cds-WP_011880738.1;Parent=gene-LDO38_RS04300;Dbxref=GenBank:WP_011880738.1;Name=WP_011880738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898575.1;locus_tag=LDO38_RS04300;product=ureidoglycolate lyase;protein_id=WP_011880738.1;transl_table=11 NZ_CAJZAL010000035.1 RefSeq gene 18986 19750 . - . ID=gene-LDO38_RS04305;Name=LDO38_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04305;old_locus_tag=BVI2075_130021 NZ_CAJZAL010000035.1 Protein Homology CDS 18986 19750 . - 0 ID=cds-WP_011880739.1;Parent=gene-LDO38_RS04305;Dbxref=GenBank:WP_011880739.1;Name=WP_011880739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089736.1;locus_tag=LDO38_RS04305;product=SDR family oxidoreductase;protein_id=WP_011880739.1;transl_table=11 NZ_CAJZAL010000035.1 RefSeq gene 20414 20704 . + . ID=gene-LDO38_RS04310;Name=LDO38_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04310;old_locus_tag=BVI2075_130023 NZ_CAJZAL010000035.1 Protein Homology CDS 20414 20704 . + 0 ID=cds-WP_011880740.1;Parent=gene-LDO38_RS04310;Dbxref=GenBank:WP_011880740.1;Name=WP_011880740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547132.1;locus_tag=LDO38_RS04310;product=DUF3331 domain-containing protein;protein_id=WP_011880740.1;transl_table=11 NZ_CAJZAL010000035.1 RefSeq gene 21058 21360 . + . ID=gene-LDO38_RS04315;Name=LDO38_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04315;old_locus_tag=BVI2075_130024 NZ_CAJZAL010000035.1 Protein Homology CDS 21058 21360 . + 0 ID=cds-WP_011880741.1;Parent=gene-LDO38_RS04315;Dbxref=GenBank:WP_011880741.1;Name=WP_011880741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723947.1;locus_tag=LDO38_RS04315;product=DUF4148 domain-containing protein;protein_id=WP_011880741.1;transl_table=11 NZ_CAJZAL010000035.1 RefSeq gene 21551 22747 . - . ID=gene-LDO38_RS04320;Name=LDO38_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04320;old_locus_tag=BVI2075_130025 NZ_CAJZAL010000035.1 Protein Homology CDS 21551 22747 . - 0 ID=cds-WP_224056205.1;Parent=gene-LDO38_RS04320;Dbxref=GenBank:WP_224056205.1;Name=WP_224056205.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756115.1;locus_tag=LDO38_RS04320;product=TauD/TfdA family dioxygenase;protein_id=WP_224056205.1;transl_table=11 NZ_CAJZAL010000035.1 RefSeq gene 22770 23235 . - . ID=gene-LDO38_RS04325;Name=LDO38_RS04325;end_range=23235,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04325;old_locus_tag=BVI2075_130026;partial=true NZ_CAJZAL010000035.1 Protein Homology CDS 22770 23235 . - 1 ID=cds-WP_224056206.1;Parent=gene-LDO38_RS04325;Dbxref=GenBank:WP_224056206.1;Name=WP_224056206.1;Ontology_term=GO:0016787;end_range=23235,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354223.1;locus_tag=LDO38_RS04325;partial=true;product=alpha/beta hydrolase fold domain-containing protein;protein_id=WP_224056206.1;transl_table=11 ##sequence-region NZ_CAJZAL010000036.1 1 5410 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000036.1 RefSeq region 1 5410 . + . ID=NZ_CAJZAL010000036.1:1..5410;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_130 NZ_CAJZAL010000036.1 RefSeq gene 1 528 . + . ID=gene-LDO38_RS04330;Name=LDO38_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04330;old_locus_tag=BVI2075_1300001;partial=true;start_range=.,1 NZ_CAJZAL010000036.1 Protein Homology CDS 1 528 . + 0 ID=cds-WP_224056207.1;Parent=gene-LDO38_RS04330;Dbxref=GenBank:WP_224056207.1;Name=WP_224056207.1;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367037.1;locus_tag=LDO38_RS04330;partial=true;product=HAD-IC family P-type ATPase;protein_id=WP_224056207.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000036.1 RefSeq gene 585 821 . - . ID=gene-LDO38_RS04335;Name=LDO38_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04335;old_locus_tag=BVI2075_1300002 NZ_CAJZAL010000036.1 Protein Homology CDS 585 821 . - 0 ID=cds-WP_059734673.1;Parent=gene-LDO38_RS04335;Dbxref=GenBank:WP_059734673.1;Name=WP_059734673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659774.1;locus_tag=LDO38_RS04335;product=hypothetical protein;protein_id=WP_059734673.1;transl_table=11 NZ_CAJZAL010000036.1 RefSeq gene 971 1450 . - . ID=gene-LDO38_RS04340;Name=LDO38_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04340;old_locus_tag=BVI2075_1300003 NZ_CAJZAL010000036.1 Protein Homology CDS 971 1450 . - 0 ID=cds-WP_034193398.1;Parent=gene-LDO38_RS04340;Dbxref=GenBank:WP_034193398.1;Name=WP_034193398.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339252.1;locus_tag=LDO38_RS04340;product=GNAT family N-acetyltransferase;protein_id=WP_034193398.1;transl_table=11 NZ_CAJZAL010000036.1 RefSeq gene 1634 1789 . - . ID=gene-LDO38_RS04345;Name=LDO38_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04345;old_locus_tag=BVI2075_1300004 NZ_CAJZAL010000036.1 Protein Homology CDS 1634 1789 . - 0 ID=cds-WP_011881014.1;Parent=gene-LDO38_RS04345;Dbxref=GenBank:WP_011881014.1;Name=WP_011881014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187391.1;locus_tag=LDO38_RS04345;product=hypothetical protein;protein_id=WP_011881014.1;transl_table=11 NZ_CAJZAL010000036.1 RefSeq gene 1965 3512 . - . ID=gene-LDO38_RS04350;Name=LDO38_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04350;old_locus_tag=BVI2075_1300005 NZ_CAJZAL010000036.1 Protein Homology CDS 1965 3512 . - 0 ID=cds-WP_404822189.1;Parent=gene-LDO38_RS04350;Dbxref=GenBank:WP_404822189.1;Name=WP_404822189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881015.1;locus_tag=LDO38_RS04350;product=flagellar hook-length control protein FliK;protein_id=WP_404822189.1;transl_table=11 NZ_CAJZAL010000036.1 RefSeq gene 3628 4323 . - . ID=gene-LDO38_RS04355;Name=LDO38_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04355;old_locus_tag=BVI2075_1300006 NZ_CAJZAL010000036.1 Protein Homology CDS 3628 4323 . - 0 ID=cds-WP_011881016.1;Parent=gene-LDO38_RS04355;Dbxref=GenBank:WP_011881016.1;Name=WP_011881016.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331058.1;locus_tag=LDO38_RS04355;product=MgtC/SapB family protein;protein_id=WP_011881016.1;transl_table=11 NZ_CAJZAL010000036.1 RefSeq gene 4439 5410 . + . ID=gene-LDO38_RS04360;Name=LDO38_RS04360;end_range=5410,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04360;partial=true NZ_CAJZAL010000036.1 Protein Homology CDS 4439 5410 . + 0 ID=cds-WP_224056208.1;Parent=gene-LDO38_RS04360;Dbxref=GenBank:WP_224056208.1;Name=WP_224056208.1;Ontology_term=GO:0016853;end_range=5410,.;gbkey=CDS;go_function=isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397389.1;locus_tag=LDO38_RS04360;partial=true;product=AGE family epimerase/isomerase;protein_id=WP_224056208.1;transl_table=11 ##sequence-region NZ_CAJZAL010000037.1 1 12058 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000037.1 RefSeq region 1 12058 . + . ID=NZ_CAJZAL010000037.1:1..12058;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_131 NZ_CAJZAL010000037.1 RefSeq gene 302 1224 . + . ID=gene-LDO38_RS04365;Name=LDO38_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04365;old_locus_tag=BVI2075_1310003;partial=true;start_range=.,302 NZ_CAJZAL010000037.1 Protein Homology CDS 302 1224 . + 2 ID=cds-WP_435520892.1;Parent=gene-LDO38_RS04365;Dbxref=GenBank:WP_435520892.1;Name=WP_435520892.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492973.1;locus_tag=LDO38_RS04365;partial=true;product=ABC transporter permease;protein_id=WP_435520892.1;start_range=.,302;transl_table=11 NZ_CAJZAL010000037.1 RefSeq gene 1267 1677 . + . ID=gene-LDO38_RS04370;Name=LDO38_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04370;old_locus_tag=BVI2075_1310004 NZ_CAJZAL010000037.1 Protein Homology CDS 1267 1677 . + 0 ID=cds-WP_011885561.1;Parent=gene-LDO38_RS04370;Dbxref=GenBank:WP_011885561.1;Name=WP_011885561.1;Ontology_term=GO:0005344,GO:0019825,GO:0020037,GO:0046872;gbkey=CDS;go_function=oxygen carrier activity|0005344||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331548.1;locus_tag=LDO38_RS04370;product=group II truncated hemoglobin;protein_id=WP_011885561.1;transl_table=11 NZ_CAJZAL010000037.1 RefSeq gene 1780 2511 . + . ID=gene-LDO38_RS04375;Name=LDO38_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04375;old_locus_tag=BVI2075_1310005 NZ_CAJZAL010000037.1 Protein Homology CDS 1780 2511 . + 0 ID=cds-WP_014723374.1;Parent=gene-LDO38_RS04375;Dbxref=GenBank:WP_014723374.1;Name=WP_014723374.1;Ontology_term=GO:0006419,GO:0002161,GO:0002196,GO:0003676,GO:0004813,GO:0005524,GO:0046872;gbkey=CDS;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA,Ser-tRNA(Ala) deacylase activity|0002196||IEA,nucleic acid binding|0003676||IEA,alanine-tRNA ligase activity|0004813||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398766.1;locus_tag=LDO38_RS04375;product=alanyl-tRNA editing protein;protein_id=WP_014723374.1;transl_table=11 NZ_CAJZAL010000037.1 RefSeq gene 2508 3143 . + . ID=gene-LDO38_RS04380;Name=LDO38_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04380;old_locus_tag=BVI2075_1310006 NZ_CAJZAL010000037.1 Protein Homology CDS 2508 3143 . + 0 ID=cds-WP_046424365.1;Parent=gene-LDO38_RS04380;Dbxref=GenBank:WP_046424365.1;Name=WP_046424365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885559.1;locus_tag=LDO38_RS04380;product=DUF924 family protein;protein_id=WP_046424365.1;transl_table=11 NZ_CAJZAL010000037.1 RefSeq gene 3211 5139 . - . ID=gene-LDO38_RS04385;Name=LDO38_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04385;old_locus_tag=BVI2075_1310007 NZ_CAJZAL010000037.1 Protein Homology CDS 3211 5139 . - 0 ID=cds-WP_059461288.1;Parent=gene-LDO38_RS04385;Dbxref=GenBank:WP_059461288.1;Name=WP_059461288.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723372.1;locus_tag=LDO38_RS04385;product=ArnT family glycosyltransferase;protein_id=WP_059461288.1;transl_table=11 NZ_CAJZAL010000037.1 RefSeq gene 5367 6128 . - . ID=gene-LDO38_RS04390;Name=LDO38_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04390;old_locus_tag=BVI2075_1310008 NZ_CAJZAL010000037.1 Protein Homology CDS 5367 6128 . - 0 ID=cds-WP_034194084.1;Parent=gene-LDO38_RS04390;Dbxref=GenBank:WP_034194084.1;Name=WP_034194084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600657.1;locus_tag=LDO38_RS04390;product=SDR family oxidoreductase;protein_id=WP_034194084.1;transl_table=11 NZ_CAJZAL010000037.1 RefSeq gene 6186 6767 . - . ID=gene-LDO38_RS04395;Name=LDO38_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04395;old_locus_tag=BVI2075_1310009 NZ_CAJZAL010000037.1 Protein Homology CDS 6186 6767 . - 0 ID=cds-WP_034194062.1;Parent=gene-LDO38_RS04395;Dbxref=GenBank:WP_034194062.1;Name=WP_034194062.1;Ontology_term=GO:0009691,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885556.1;locus_tag=LDO38_RS04395;product=TIGR00730 family Rossman fold protein;protein_id=WP_034194062.1;transl_table=11 NZ_CAJZAL010000037.1 RefSeq gene 6764 7525 . - . ID=gene-LDO38_RS04400;Name=LDO38_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04400;old_locus_tag=BVI2075_1310010 NZ_CAJZAL010000037.1 Protein Homology CDS 6764 7525 . - 0 ID=cds-WP_014723369.1;Parent=gene-LDO38_RS04400;Dbxref=GenBank:WP_014723369.1;Name=WP_014723369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212998.1;locus_tag=LDO38_RS04400;product=TetR/AcrR family transcriptional regulator;protein_id=WP_014723369.1;transl_table=11 NZ_CAJZAL010000037.1 RefSeq gene 7716 8252 . - . ID=gene-LDO38_RS04405;Name=LDO38_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04405;old_locus_tag=BVI2075_1310011 NZ_CAJZAL010000037.1 Protein Homology CDS 7716 8252 . - 0 ID=cds-WP_011885554.1;Parent=gene-LDO38_RS04405;Dbxref=GenBank:WP_011885554.1;Name=WP_011885554.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411034.1;locus_tag=LDO38_RS04405;product=diacylglycerol kinase;protein_id=WP_011885554.1;transl_table=11 NZ_CAJZAL010000037.1 RefSeq gene 8249 9283 . - . ID=gene-LDO38_RS04410;Name=LDO38_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04410;old_locus_tag=BVI2075_1310012 NZ_CAJZAL010000037.1 Protein Homology CDS 8249 9283 . - 0 ID=cds-WP_011885553.1;Parent=gene-LDO38_RS04410;Dbxref=GenBank:WP_011885553.1;Name=WP_011885553.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328913.1;locus_tag=LDO38_RS04410;product=glycosyltransferase family 4 protein;protein_id=WP_011885553.1;transl_table=11 NZ_CAJZAL010000037.1 RefSeq gene 9313 10251 . - . ID=gene-LDO38_RS04415;Name=LDO38_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04415;old_locus_tag=BVI2075_1310013 NZ_CAJZAL010000037.1 Protein Homology CDS 9313 10251 . - 0 ID=cds-WP_011885552.1;Parent=gene-LDO38_RS04415;Dbxref=GenBank:WP_011885552.1;Name=WP_011885552.1;Ontology_term=GO:0009245,GO:0008758,GO:0046872;gbkey=CDS;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,metal ion binding|0046872||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885552.1;locus_tag=LDO38_RS04415;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_011885552.1;transl_table=11 NZ_CAJZAL010000037.1 RefSeq gene 10545 10985 . - . ID=gene-LDO38_RS04420;Name=LDO38_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04420;old_locus_tag=BVI2075_1310014 NZ_CAJZAL010000037.1 Protein Homology CDS 10545 10985 . - 0 ID=cds-WP_230939326.1;Parent=gene-LDO38_RS04420;Dbxref=GenBank:WP_230939326.1;Name=WP_230939326.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763820.1;locus_tag=LDO38_RS04420;product=RDD family protein;protein_id=WP_230939326.1;transl_table=11 NZ_CAJZAL010000037.1 RefSeq gene 11064 11810 . - . ID=gene-LDO38_RS04425;Name=LDO38_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04425;old_locus_tag=BVI2075_1310015 NZ_CAJZAL010000037.1 Protein Homology CDS 11064 11810 . - 0 ID=cds-WP_011885550.1;Parent=gene-LDO38_RS04425;Dbxref=GenBank:WP_011885550.1;Name=WP_011885550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011854043.1;locus_tag=LDO38_RS04425;product=DUF3106 domain-containing protein;protein_id=WP_011885550.1;transl_table=11 NZ_CAJZAL010000037.1 RefSeq gene 11838 12058 . - . ID=gene-LDO38_RS04430;Name=LDO38_RS04430;end_range=12058,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04430;partial=true NZ_CAJZAL010000037.1 Protein Homology CDS 11838 12058 . - 2 ID=cds-WP_224056209.1;Parent=gene-LDO38_RS04430;Dbxref=GenBank:WP_224056209.1;Name=WP_224056209.1;end_range=12058,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364327.1;locus_tag=LDO38_RS04430;partial=true;product=DUF3619 family protein;protein_id=WP_224056209.1;transl_table=11 ##sequence-region NZ_CAJZAL010000038.1 1 1763 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000038.1 RefSeq region 1 1763 . + . ID=NZ_CAJZAL010000038.1:1..1763;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_132 NZ_CAJZAL010000038.1 RefSeq pseudogene 1 167 . - . ID=gene-LDO38_RS04435;Name=LDO38_RS04435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS04435;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000038.1 Protein Homology CDS 1 167 . - 0 ID=cds-LDO38_RS04435;Parent=gene-LDO38_RS04435;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492304.1;locus_tag=LDO38_RS04435;partial=true;product=thiamine phosphate synthase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000038.1 RefSeq gene 164 979 . - . ID=gene-LDO38_RS04440;Name=LDO38_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04440;old_locus_tag=BVI2075_1320002 NZ_CAJZAL010000038.1 Protein Homology CDS 164 979 . - 0 ID=cds-WP_011883041.1;Parent=gene-LDO38_RS04440;Dbxref=GenBank:WP_011883041.1;Name=WP_011883041.1;Ontology_term=GO:1990107;gbkey=CDS;go_function=thiazole synthase activity|1990107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106891.1;locus_tag=LDO38_RS04440;product=thiazole synthase;protein_id=WP_011883041.1;transl_table=11 NZ_CAJZAL010000038.1 RefSeq gene 1018 1215 . - . ID=gene-LDO38_RS04445;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=LDO38_RS04445;old_locus_tag=BVI2075_1320003 NZ_CAJZAL010000038.1 Protein Homology CDS 1018 1215 . - 0 ID=cds-WP_011883040.1;Parent=gene-LDO38_RS04445;Dbxref=GenBank:WP_011883040.1;Name=WP_011883040.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009888501.1;locus_tag=LDO38_RS04445;product=sulfur carrier protein ThiS;protein_id=WP_011883040.1;transl_table=11 NZ_CAJZAL010000038.1 RefSeq gene 1248 1763 . - . ID=gene-LDO38_RS04450;Name=LDO38_RS04450;end_range=1763,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04450;old_locus_tag=BVI2075_1320004;partial=true NZ_CAJZAL010000038.1 Protein Homology CDS 1248 1763 . - 0 ID=cds-WP_224056211.1;Parent=gene-LDO38_RS04450;Dbxref=GenBank:WP_224056211.1;Name=WP_224056211.1;Ontology_term=GO:0016491;end_range=1763,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400599.1;locus_tag=LDO38_RS04450;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_224056211.1;transl_table=11 ##sequence-region NZ_CAJZAL010000039.1 1 20392 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000039.1 RefSeq region 1 20392 . + . ID=NZ_CAJZAL010000039.1:1..20392;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_133 NZ_CAJZAL010000039.1 RefSeq gene 137 1420 . + . ID=gene-LDO38_RS04455;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=LDO38_RS04455;old_locus_tag=BVI2075_1330002 NZ_CAJZAL010000039.1 Protein Homology CDS 137 1420 . + 0 ID=cds-WP_011883176.1;Parent=gene-LDO38_RS04455;Dbxref=GenBank:WP_011883176.1;Name=WP_011883176.1;Ontology_term=GO:0009252,GO:0051301,GO:0016020;gbkey=CDS;gene=ftsW;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600547.1;locus_tag=LDO38_RS04455;product=putative lipid II flippase FtsW;protein_id=WP_011883176.1;transl_table=11 NZ_CAJZAL010000039.1 RefSeq gene 1542 2645 . + . ID=gene-LDO38_RS04460;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=LDO38_RS04460;old_locus_tag=BVI2075_1330003 NZ_CAJZAL010000039.1 Protein Homology CDS 1542 2645 . + 0 ID=cds-WP_011883177.1;Parent=gene-LDO38_RS04460;Dbxref=GenBank:WP_011883177.1;Name=WP_011883177.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004541310.1;locus_tag=LDO38_RS04460;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_011883177.1;transl_table=11 NZ_CAJZAL010000039.1 RefSeq gene 2642 4039 . + . ID=gene-LDO38_RS04465;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=LDO38_RS04465;old_locus_tag=BVI2075_1330004 NZ_CAJZAL010000039.1 Protein Homology CDS 2642 4039 . + 0 ID=cds-WP_011883178.1;Parent=gene-LDO38_RS04465;Dbxref=GenBank:WP_011883178.1;Name=WP_011883178.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009903890.1;locus_tag=LDO38_RS04465;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_011883178.1;transl_table=11 NZ_CAJZAL010000039.1 RefSeq gene 4041 4982 . + . ID=gene-LDO38_RS04470;Name=LDO38_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04470;old_locus_tag=BVI2075_1330005 NZ_CAJZAL010000039.1 Protein Homology CDS 4041 4982 . + 0 ID=cds-WP_011883179.1;Parent=gene-LDO38_RS04470;Dbxref=GenBank:WP_011883179.1;Name=WP_011883179.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011489915.1;locus_tag=LDO38_RS04470;product=D-alanine--D-alanine ligase;protein_id=WP_011883179.1;transl_table=11 NZ_CAJZAL010000039.1 RefSeq gene 5002 5754 . + . ID=gene-LDO38_RS04475;Name=LDO38_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04475;old_locus_tag=BVI2075_1330006 NZ_CAJZAL010000039.1 Protein Homology CDS 5002 5754 . + 0 ID=cds-WP_011883180.1;Parent=gene-LDO38_RS04475;Dbxref=GenBank:WP_011883180.1;Name=WP_011883180.1;Ontology_term=GO:0043093,GO:0051301;gbkey=CDS;go_process=FtsZ-dependent cytokinesis|0043093||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522020.1;locus_tag=LDO38_RS04475;product=cell division protein FtsQ/DivIB;protein_id=WP_011883180.1;transl_table=11 NZ_CAJZAL010000039.1 RefSeq gene 5781 7013 . + . ID=gene-LDO38_RS04480;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=LDO38_RS04480;old_locus_tag=BVI2075_1330007 NZ_CAJZAL010000039.1 Protein Homology CDS 5781 7013 . + 0 ID=cds-WP_006752447.1;Parent=gene-LDO38_RS04480;Dbxref=GenBank:WP_006752447.1;Name=WP_006752447.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898179.1;locus_tag=LDO38_RS04480;product=cell division protein FtsA;protein_id=WP_006752447.1;transl_table=11 NZ_CAJZAL010000039.1 RefSeq gene 7125 8321 . + . ID=gene-LDO38_RS04485;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=LDO38_RS04485;old_locus_tag=BVI2075_1330008 NZ_CAJZAL010000039.1 Protein Homology CDS 7125 8321 . + 0 ID=cds-WP_011883181.1;Parent=gene-LDO38_RS04485;Dbxref=GenBank:WP_011883181.1;Name=WP_011883181.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020071225.1;locus_tag=LDO38_RS04485;product=cell division protein FtsZ;protein_id=WP_011883181.1;transl_table=11 NZ_CAJZAL010000039.1 RefSeq gene 8509 9015 . + . ID=gene-LDO38_RS04490;Name=LDO38_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04490;old_locus_tag=BVI2075_1330009 NZ_CAJZAL010000039.1 Protein Homology CDS 8509 9015 . + 0 ID=cds-WP_011883182.1;Parent=gene-LDO38_RS04490;Dbxref=GenBank:WP_011883182.1;Name=WP_011883182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883182.1;locus_tag=LDO38_RS04490;product=peroxiredoxin;protein_id=WP_011883182.1;transl_table=11 NZ_CAJZAL010000039.1 RefSeq gene 9255 10172 . + . ID=gene-LDO38_RS04495;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=LDO38_RS04495;old_locus_tag=BVI2075_1330011 NZ_CAJZAL010000039.1 Protein Homology CDS 9255 10172 . + 0 ID=cds-WP_011883183.1;Parent=gene-LDO38_RS04495;Dbxref=GenBank:WP_011883183.1;Name=WP_011883183.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106607.1;locus_tag=LDO38_RS04495;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_011883183.1;transl_table=11 NZ_CAJZAL010000039.1 RefSeq gene 10251 10730 . - . ID=gene-LDO38_RS04500;Name=LDO38_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04500;old_locus_tag=BVI2075_1330012 NZ_CAJZAL010000039.1 Protein Homology CDS 10251 10730 . - 0 ID=cds-WP_011883184.1;Parent=gene-LDO38_RS04500;Dbxref=GenBank:WP_011883184.1;Name=WP_011883184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025158.1;locus_tag=LDO38_RS04500;product=DUF721 domain-containing protein;protein_id=WP_011883184.1;transl_table=11 NZ_CAJZAL010000039.1 RefSeq gene 11000 13792 . + . ID=gene-LDO38_RS04505;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=LDO38_RS04505;old_locus_tag=BVI2075_1330013 NZ_CAJZAL010000039.1 Protein Homology CDS 11000 13792 . + 0 ID=cds-WP_014722396.1;Parent=gene-LDO38_RS04505;Dbxref=GenBank:WP_014722396.1;Name=WP_014722396.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544506.1;locus_tag=LDO38_RS04505;product=preprotein translocase subunit SecA;protein_id=WP_014722396.1;transl_table=11 NZ_CAJZAL010000039.1 RefSeq gene 13936 15177 . + . ID=gene-LDO38_RS04510;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;locus_tag=LDO38_RS04510;old_locus_tag=BVI2075_1330014 NZ_CAJZAL010000039.1 Protein Homology CDS 13936 15177 . + 0 ID=cds-WP_059476091.1;Parent=gene-LDO38_RS04510;Dbxref=GenBank:WP_059476091.1;Name=WP_059476091.1;Ontology_term=GO:0006526,GO:0004358;gbkey=CDS;gene=argJ;go_function=L-glutamate N-acetyltransferase activity%2C acting on acetyl-L-ornithine as donor|0004358||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333474.1;locus_tag=LDO38_RS04510;product=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;protein_id=WP_059476091.1;transl_table=11 NZ_CAJZAL010000039.1 RefSeq gene 15197 16066 . + . ID=gene-LDO38_RS04515;Name=LDO38_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04515;old_locus_tag=BVI2075_1330015 NZ_CAJZAL010000039.1 Protein Homology CDS 15197 16066 . + 0 ID=cds-WP_034194185.1;Parent=gene-LDO38_RS04515;Dbxref=GenBank:WP_034194185.1;Name=WP_034194185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350849.1;locus_tag=LDO38_RS04515;product=ATP-binding protein;protein_id=WP_034194185.1;transl_table=11 NZ_CAJZAL010000039.1 RefSeq gene 16063 16521 . + . ID=gene-LDO38_RS04520;Name=LDO38_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04520;old_locus_tag=BVI2075_1330016 NZ_CAJZAL010000039.1 Protein Homology CDS 16063 16521 . + 0 ID=cds-WP_011883188.1;Parent=gene-LDO38_RS04520;Dbxref=GenBank:WP_011883188.1;Name=WP_011883188.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883188.1;locus_tag=LDO38_RS04520;product=NUDIX domain-containing protein;protein_id=WP_011883188.1;transl_table=11 NZ_CAJZAL010000039.1 RefSeq gene 16587 16787 . - . ID=gene-LDO38_RS04525;Name=LDO38_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04525;old_locus_tag=BVI2075_1330017 NZ_CAJZAL010000039.1 Protein Homology CDS 16587 16787 . - 0 ID=cds-WP_011883189.1;Parent=gene-LDO38_RS04525;Dbxref=GenBank:WP_011883189.1;Name=WP_011883189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883189.1;locus_tag=LDO38_RS04525;product=DNA gyrase inhibitor YacG;protein_id=WP_011883189.1;transl_table=11 NZ_CAJZAL010000039.1 RefSeq gene 16816 17571 . - . ID=gene-LDO38_RS04530;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=LDO38_RS04530;old_locus_tag=BVI2075_1330018 NZ_CAJZAL010000039.1 Protein Homology CDS 16816 17571 . - 0 ID=cds-WP_011883190.1;Parent=gene-LDO38_RS04530;Dbxref=GenBank:WP_011883190.1;Name=WP_011883190.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756831.1;locus_tag=LDO38_RS04530;product=cell division protein ZapD;protein_id=WP_011883190.1;transl_table=11 NZ_CAJZAL010000039.1 RefSeq gene 17681 18289 . - . ID=gene-LDO38_RS04535;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=LDO38_RS04535;old_locus_tag=BVI2075_1330019 NZ_CAJZAL010000039.1 Protein Homology CDS 17681 18289 . - 0 ID=cds-WP_059622036.1;Parent=gene-LDO38_RS04535;Dbxref=GenBank:WP_059622036.1;Name=WP_059622036.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487123.1;locus_tag=LDO38_RS04535;product=dephospho-CoA kinase;protein_id=WP_059622036.1;transl_table=11 NZ_CAJZAL010000039.1 RefSeq gene 18380 19291 . - . ID=gene-LDO38_RS04540;Name=LDO38_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04540;old_locus_tag=BVI2075_1330020 NZ_CAJZAL010000039.1 Protein Homology CDS 18380 19291 . - 0 ID=cds-WP_175983376.1;Parent=gene-LDO38_RS04540;Dbxref=GenBank:WP_175983376.1;Name=WP_175983376.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883192.1;locus_tag=LDO38_RS04540;product=prepilin peptidase;protein_id=WP_175983376.1;transl_table=11 NZ_CAJZAL010000039.1 RefSeq gene 19331 20392 . - . ID=gene-LDO38_RS04545;Name=LDO38_RS04545;end_range=20392,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04545;old_locus_tag=BVI2075_1330021;partial=true NZ_CAJZAL010000039.1 Protein Homology CDS 19331 20392 . - 0 ID=cds-WP_224056212.1;Parent=gene-LDO38_RS04545;Dbxref=GenBank:WP_224056212.1;Name=WP_224056212.1;Ontology_term=GO:0015628,GO:0005886,GO:0016020;end_range=20392,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350855.1;locus_tag=LDO38_RS04545;partial=true;product=type II secretion system F family protein;protein_id=WP_224056212.1;transl_table=11 ##sequence-region NZ_CAJZAL010000040.1 1 5168 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000040.1 RefSeq region 1 5168 . + . ID=NZ_CAJZAL010000040.1:1..5168;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_134 NZ_CAJZAL010000040.1 RefSeq gene 1 833 . + . ID=gene-LDO38_RS04550;Name=LDO38_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04550;old_locus_tag=BVI2075_1340001;partial=true;start_range=.,1 NZ_CAJZAL010000040.1 Protein Homology CDS 1 833 . + 2 ID=cds-WP_224056213.1;Parent=gene-LDO38_RS04550;Dbxref=GenBank:WP_224056213.1;Name=WP_224056213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726004.1;locus_tag=LDO38_RS04550;partial=true;product=DUF2345 domain-containing protein;protein_id=WP_224056213.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000040.1 RefSeq pseudogene 830 1688 . + . ID=gene-LDO38_RS30315;Name=LDO38_RS30315;end_range=1688,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30315;old_locus_tag=BVI2075_1340002;partial=true;pseudo=true NZ_CAJZAL010000040.1 GeneMarkS-2+ CDS 830 1688 . + 0 ID=cds-LDO38_RS30315;Parent=gene-LDO38_RS30315;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1688,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30315;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CAJZAL010000040.1 RefSeq pseudogene 1699 1974 . + . ID=gene-LDO38_RS30320;Name=LDO38_RS30320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30320;partial=true;pseudo=true;start_range=.,1699 NZ_CAJZAL010000040.1 GeneMarkS-2+ CDS 1699 1974 . + 0 ID=cds-LDO38_RS30320;Parent=gene-LDO38_RS30320;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30320;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1699;transl_table=11 NZ_CAJZAL010000040.1 RefSeq gene 1971 2996 . + . ID=gene-LDO38_RS04555;Name=LDO38_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04555;old_locus_tag=BVI2075_1340004 NZ_CAJZAL010000040.1 Protein Homology CDS 1971 2996 . + 0 ID=cds-WP_176043272.1;Parent=gene-LDO38_RS04555;Dbxref=GenBank:WP_176043272.1;Name=WP_176043272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013543877.1;locus_tag=LDO38_RS04555;product=PoNe immunity protein domain-containing protein;protein_id=WP_176043272.1;transl_table=11 NZ_CAJZAL010000040.1 RefSeq gene 3106 3529 . + . ID=gene-LDO38_RS30325;Name=LDO38_RS30325;end_range=3529,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30325;old_locus_tag=BVI2075_1340005;partial=true NZ_CAJZAL010000040.1 GeneMarkS-2+ CDS 3106 3529 . + 0 ID=cds-WP_435520893.1;Parent=gene-LDO38_RS30325;Dbxref=GenBank:WP_435520893.1;Name=WP_435520893.1;end_range=3529,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30325;partial=true;product=hypothetical protein;protein_id=WP_435520893.1;transl_table=11 NZ_CAJZAL010000040.1 RefSeq pseudogene 3540 3815 . + . ID=gene-LDO38_RS30330;Name=LDO38_RS30330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30330;old_locus_tag=BVI2075_1340006;partial=true;pseudo=true;start_range=.,3540 NZ_CAJZAL010000040.1 GeneMarkS-2+ CDS 3540 3815 . + 0 ID=cds-LDO38_RS30330;Parent=gene-LDO38_RS30330;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30330;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3540;transl_table=11 NZ_CAJZAL010000040.1 RefSeq gene 3825 4850 . + . ID=gene-LDO38_RS04560;Name=LDO38_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04560;old_locus_tag=BVI2075_1340007 NZ_CAJZAL010000040.1 Protein Homology CDS 3825 4850 . + 0 ID=cds-WP_224056214.1;Parent=gene-LDO38_RS04560;Dbxref=GenBank:WP_224056214.1;Name=WP_224056214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013543877.1;locus_tag=LDO38_RS04560;product=PoNe immunity protein domain-containing protein;protein_id=WP_224056214.1;transl_table=11 NZ_CAJZAL010000040.1 RefSeq gene 4948 5168 . - . ID=gene-LDO38_RS04565;Name=LDO38_RS04565;end_range=5168,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04565;old_locus_tag=BVI2075_1340008;partial=true NZ_CAJZAL010000040.1 Protein Homology CDS 4948 5168 . - 2 ID=cds-WP_224056215.1;Parent=gene-LDO38_RS04565;Dbxref=GenBank:WP_224056215.1;Name=WP_224056215.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=5168,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492556.1;locus_tag=LDO38_RS04565;partial=true;product=transposase;protein_id=WP_224056215.1;transl_table=11 ##sequence-region NZ_CAJZAL010000041.1 1 12913 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000041.1 RefSeq region 1 12913 . + . ID=NZ_CAJZAL010000041.1:1..12913;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_135 NZ_CAJZAL010000041.1 RefSeq gene 1 563 . - . ID=gene-LDO38_RS04570;Name=LDO38_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04570;partial=true;start_range=.,1 NZ_CAJZAL010000041.1 Protein Homology CDS 1 563 . - 0 ID=cds-WP_224056216.1;Parent=gene-LDO38_RS04570;Dbxref=GenBank:WP_224056216.1;Name=WP_224056216.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413094.1;locus_tag=LDO38_RS04570;partial=true;product=MFS transporter;protein_id=WP_224056216.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000041.1 RefSeq gene 961 1725 . - . ID=gene-LDO38_RS04575;Name=LDO38_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04575;old_locus_tag=BVI2075_1350002 NZ_CAJZAL010000041.1 Protein Homology CDS 961 1725 . - 0 ID=cds-WP_224056217.1;Parent=gene-LDO38_RS04575;Dbxref=GenBank:WP_224056217.1;Name=WP_224056217.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548185.1;locus_tag=LDO38_RS04575;product=helix-turn-helix transcriptional regulator;protein_id=WP_224056217.1;transl_table=11 NZ_CAJZAL010000041.1 RefSeq gene 1748 2089 . - . ID=gene-LDO38_RS04580;Name=LDO38_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04580;old_locus_tag=BVI2075_1350003 NZ_CAJZAL010000041.1 Protein Homology CDS 1748 2089 . - 0 ID=cds-WP_011881547.1;Parent=gene-LDO38_RS04580;Dbxref=GenBank:WP_011881547.1;Name=WP_011881547.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754049.1;locus_tag=LDO38_RS04580;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_011881547.1;transl_table=11 NZ_CAJZAL010000041.1 RefSeq gene 2652 3575 . + . ID=gene-LDO38_RS04585;Name=LDO38_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04585;old_locus_tag=BVI2075_1350004 NZ_CAJZAL010000041.1 Protein Homology CDS 2652 3575 . + 0 ID=cds-WP_059695989.1;Parent=gene-LDO38_RS04585;Dbxref=GenBank:WP_059695989.1;Name=WP_059695989.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479473.1;locus_tag=LDO38_RS04585;product=metal-dependent hydrolase;protein_id=WP_059695989.1;transl_table=11 NZ_CAJZAL010000041.1 RefSeq gene 4042 5508 . + . ID=gene-LDO38_RS04590;Name=LDO38_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04590;old_locus_tag=BVI2075_1350005 NZ_CAJZAL010000041.1 Protein Homology CDS 4042 5508 . + 0 ID=cds-WP_011881549.1;Parent=gene-LDO38_RS04590;Dbxref=GenBank:WP_011881549.1;Name=WP_011881549.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754051.1;locus_tag=LDO38_RS04590;product=sigma-54 dependent transcriptional regulator;protein_id=WP_011881549.1;transl_table=11 NZ_CAJZAL010000041.1 RefSeq gene 6051 6299 . + . ID=gene-LDO38_RS04595;Name=LDO38_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04595;old_locus_tag=BVI2075_1350006 NZ_CAJZAL010000041.1 Protein Homology CDS 6051 6299 . + 0 ID=cds-WP_014724625.1;Parent=gene-LDO38_RS04595;Dbxref=GenBank:WP_014724625.1;Name=WP_014724625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881550.1;locus_tag=LDO38_RS04595;product=hypothetical protein;protein_id=WP_014724625.1;transl_table=11 NZ_CAJZAL010000041.1 RefSeq gene 6517 7299 . - . ID=gene-LDO38_RS04600;Name=LDO38_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04600;old_locus_tag=BVI2075_1350007 NZ_CAJZAL010000041.1 Protein Homology CDS 6517 7299 . - 0 ID=cds-WP_034194975.1;Parent=gene-LDO38_RS04600;Dbxref=GenBank:WP_034194975.1;Name=WP_034194975.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090202.1;locus_tag=LDO38_RS04600;product=ABC transporter substrate-binding protein;protein_id=WP_034194975.1;transl_table=11 NZ_CAJZAL010000041.1 RefSeq gene 7537 7965 . + . ID=gene-LDO38_RS04605;Name=LDO38_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04605;old_locus_tag=BVI2075_1350009 NZ_CAJZAL010000041.1 Protein Homology CDS 7537 7965 . + 0 ID=cds-WP_034194976.1;Parent=gene-LDO38_RS04605;Dbxref=GenBank:WP_034194976.1;Name=WP_034194976.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009895626.1;locus_tag=LDO38_RS04605;product=MbcA/ParS/Xre antitoxin family protein;protein_id=WP_034194976.1;transl_table=11 NZ_CAJZAL010000041.1 RefSeq gene 7968 8663 . + . ID=gene-LDO38_RS04610;Name=LDO38_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04610;old_locus_tag=BVI2075_1350010 NZ_CAJZAL010000041.1 Protein Homology CDS 7968 8663 . + 0 ID=cds-WP_034194977.1;Parent=gene-LDO38_RS04610;Dbxref=GenBank:WP_034194977.1;Name=WP_034194977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660474.1;locus_tag=LDO38_RS04610;product=RES family NAD+ phosphorylase;protein_id=WP_034194977.1;transl_table=11 NZ_CAJZAL010000041.1 RefSeq gene 8698 9423 . - . ID=gene-LDO38_RS04615;Name=LDO38_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04615;old_locus_tag=BVI2075_1350011 NZ_CAJZAL010000041.1 Protein Homology CDS 8698 9423 . - 0 ID=cds-WP_060044590.1;Parent=gene-LDO38_RS04615;Dbxref=GenBank:WP_060044590.1;Name=WP_060044590.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900053.1;locus_tag=LDO38_RS04615;product=metallophosphoesterase;protein_id=WP_060044590.1;transl_table=11 NZ_CAJZAL010000041.1 RefSeq gene 9560 10213 . + . ID=gene-LDO38_RS04620;Name=LDO38_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04620;old_locus_tag=BVI2075_1350012 NZ_CAJZAL010000041.1 Protein Homology CDS 9560 10213 . + 0 ID=cds-WP_014724630.1;Parent=gene-LDO38_RS04620;Dbxref=GenBank:WP_014724630.1;Name=WP_014724630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009895632.1;locus_tag=LDO38_RS04620;product=DUF1345 domain-containing protein;protein_id=WP_014724630.1;transl_table=11 NZ_CAJZAL010000041.1 RefSeq gene 10223 10933 . - . ID=gene-LDO38_RS04625;Name=LDO38_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04625;old_locus_tag=BVI2075_1350013 NZ_CAJZAL010000041.1 Protein Homology CDS 10223 10933 . - 0 ID=cds-WP_060044589.1;Parent=gene-LDO38_RS04625;Dbxref=GenBank:WP_060044589.1;Name=WP_060044589.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660478.1;locus_tag=LDO38_RS04625;product=class I SAM-dependent methyltransferase;protein_id=WP_060044589.1;transl_table=11 NZ_CAJZAL010000041.1 RefSeq gene 11234 12892 . + . ID=gene-LDO38_RS04630;Name=LDO38_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04630;old_locus_tag=BVI2075_1350014 NZ_CAJZAL010000041.1 Protein Homology CDS 11234 12892 . + 0 ID=cds-WP_124260009.1;Parent=gene-LDO38_RS04630;Dbxref=GenBank:WP_124260009.1;Name=WP_124260009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881557.1;locus_tag=LDO38_RS04630;product=DUF3459 domain-containing protein;protein_id=WP_124260009.1;transl_table=11 ##sequence-region NZ_CAJZAL010000042.1 1 10993 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000042.1 RefSeq region 1 10993 . + . ID=NZ_CAJZAL010000042.1:1..10993;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_136 NZ_CAJZAL010000042.1 RefSeq gene 332 823 . + . ID=gene-LDO38_RS04635;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=LDO38_RS04635;old_locus_tag=BVI2075_1360001 NZ_CAJZAL010000042.1 Protein Homology CDS 332 823 . + 0 ID=cds-WP_011885820.1;Parent=gene-LDO38_RS04635;Dbxref=GenBank:WP_011885820.1;Name=WP_011885820.1;Ontology_term=GO:0043039,GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189587.1;locus_tag=LDO38_RS04635;product=Cys-tRNA(Pro) deacylase;protein_id=WP_011885820.1;transl_table=11 NZ_CAJZAL010000042.1 RefSeq gene 1000 1638 . + . ID=gene-LDO38_RS04640;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=LDO38_RS04640;old_locus_tag=BVI2075_1360002 NZ_CAJZAL010000042.1 Protein Homology CDS 1000 1638 . + 0 ID=cds-WP_059621819.1;Parent=gene-LDO38_RS04640;Dbxref=GenBank:WP_059621819.1;Name=WP_059621819.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657750.1;locus_tag=LDO38_RS04640;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_059621819.1;transl_table=11 NZ_CAJZAL010000042.1 RefSeq gene 1724 2209 . - . ID=gene-LDO38_RS04645;Name=LDO38_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04645;old_locus_tag=BVI2075_1360003 NZ_CAJZAL010000042.1 Protein Homology CDS 1724 2209 . - 0 ID=cds-WP_011885818.1;Parent=gene-LDO38_RS04645;Dbxref=GenBank:WP_011885818.1;Name=WP_011885818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189237.1;locus_tag=LDO38_RS04645;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_011885818.1;transl_table=11 NZ_CAJZAL010000042.1 RefSeq gene 2344 3393 . + . ID=gene-LDO38_RS04650;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=LDO38_RS04650;old_locus_tag=BVI2075_1360004 NZ_CAJZAL010000042.1 Protein Homology CDS 2344 3393 . + 0 ID=cds-WP_059460503.1;Parent=gene-LDO38_RS04650;Dbxref=GenBank:WP_059460503.1;Name=WP_059460503.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482213.1;locus_tag=LDO38_RS04650;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_059460503.1;transl_table=11 NZ_CAJZAL010000042.1 RefSeq gene 3508 4437 . - . ID=gene-LDO38_RS04655;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=LDO38_RS04655;old_locus_tag=BVI2075_1360005 NZ_CAJZAL010000042.1 Protein Homology CDS 3508 4437 . - 0 ID=cds-WP_011885816.1;Parent=gene-LDO38_RS04655;Dbxref=GenBank:WP_011885816.1;Name=WP_011885816.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190177.1;locus_tag=LDO38_RS04655;product=ornithine carbamoyltransferase;protein_id=WP_011885816.1;transl_table=11 NZ_CAJZAL010000042.1 RefSeq gene 4852 5172 . + . ID=gene-LDO38_RS04660;Name=LDO38_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04660;old_locus_tag=BVI2075_1360007 NZ_CAJZAL010000042.1 Protein Homology CDS 4852 5172 . + 0 ID=cds-WP_011885815.1;Parent=gene-LDO38_RS04660;Dbxref=GenBank:WP_011885815.1;Name=WP_011885815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896238.1;locus_tag=LDO38_RS04660;product=DUF3579 domain-containing protein;protein_id=WP_011885815.1;transl_table=11 NZ_CAJZAL010000042.1 RefSeq gene 5313 5585 . - . ID=gene-LDO38_RS04665;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=LDO38_RS04665;old_locus_tag=BVI2075_1360008 NZ_CAJZAL010000042.1 Protein Homology CDS 5313 5585 . - 0 ID=cds-WP_006482211.1;Parent=gene-LDO38_RS04665;Dbxref=GenBank:WP_006482211.1;Name=WP_006482211.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762077.1;locus_tag=LDO38_RS04665;product=30S ribosomal protein S20;protein_id=WP_006482211.1;transl_table=11 NZ_CAJZAL010000042.1 RefSeq gene 5845 7440 . + . ID=gene-LDO38_RS04670;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=LDO38_RS04670;old_locus_tag=BVI2075_1360009 NZ_CAJZAL010000042.1 Protein Homology CDS 5845 7440 . + 0 ID=cds-WP_311732190.1;Parent=gene-LDO38_RS04670;Dbxref=GenBank:WP_311732190.1;Name=WP_311732190.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763574.1;locus_tag=LDO38_RS04670;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_311732190.1;transl_table=11 NZ_CAJZAL010000042.1 RefSeq gene 7449 8291 . + . ID=gene-LDO38_RS04675;Name=LDO38_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04675;old_locus_tag=BVI2075_1360010 NZ_CAJZAL010000042.1 Protein Homology CDS 7449 8291 . + 0 ID=cds-WP_011885813.1;Parent=gene-LDO38_RS04675;Dbxref=GenBank:WP_011885813.1;Name=WP_011885813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892659.1;locus_tag=LDO38_RS04675;product=SirB1 family protein;protein_id=WP_011885813.1;transl_table=11 NZ_CAJZAL010000042.1 RefSeq gene 8442 9104 . - . ID=gene-LDO38_RS04680;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=LDO38_RS04680;old_locus_tag=BVI2075_1360011 NZ_CAJZAL010000042.1 Protein Homology CDS 8442 9104 . - 0 ID=cds-WP_034192639.1;Parent=gene-LDO38_RS04680;Dbxref=GenBank:WP_034192639.1;Name=WP_034192639.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=AMP kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398497.1;locus_tag=LDO38_RS04680;product=adenylate kinase;protein_id=WP_034192639.1;transl_table=11 NZ_CAJZAL010000042.1 RefSeq gene 9312 10103 . - . ID=gene-LDO38_RS04685;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=LDO38_RS04685;old_locus_tag=BVI2075_1360012 NZ_CAJZAL010000042.1 Protein Homology CDS 9312 10103 . - 0 ID=cds-WP_014723514.1;Parent=gene-LDO38_RS04685;Dbxref=GenBank:WP_014723514.1;Name=WP_014723514.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102035.1;locus_tag=LDO38_RS04685;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_014723514.1;transl_table=11 NZ_CAJZAL010000042.1 RefSeq gene 10215 10418 . - . ID=gene-LDO38_RS04690;Name=LDO38_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04690;old_locus_tag=BVI2075_1360013 NZ_CAJZAL010000042.1 Protein Homology CDS 10215 10418 . - 0 ID=cds-WP_006750935.1;Parent=gene-LDO38_RS04690;Dbxref=GenBank:WP_006750935.1;Name=WP_006750935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896244.1;locus_tag=LDO38_RS04690;product=Trm112 family protein;protein_id=WP_006750935.1;transl_table=11 NZ_CAJZAL010000042.1 RefSeq gene 10399 10993 . - . ID=gene-LDO38_RS04695;Name=lpxK;end_range=10993,.;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=LDO38_RS04695;old_locus_tag=BVI2075_1360014;partial=true NZ_CAJZAL010000042.1 Protein Homology CDS 10399 10993 . - 1 ID=cds-WP_224056218.1;Parent=gene-LDO38_RS04695;Dbxref=GenBank:WP_224056218.1;Name=WP_224056218.1;Ontology_term=GO:0009245,GO:0009029;end_range=10993,.;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333983.1;locus_tag=LDO38_RS04695;partial=true;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_224056218.1;transl_table=11 ##sequence-region NZ_CAJZAL010000043.1 1 16999 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000043.1 RefSeq region 1 16999 . + . ID=NZ_CAJZAL010000043.1:1..16999;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_137 NZ_CAJZAL010000043.1 RefSeq gene 1 242 . - . ID=gene-LDO38_RS30335;Name=LDO38_RS30335;end_range=242,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30335;partial=true;start_range=.,1 NZ_CAJZAL010000043.1 Protein Homology CDS 1 242 . - 1 ID=cds-WP_435520894.1;Parent=gene-LDO38_RS30335;Dbxref=GenBank:WP_435520894.1;Name=WP_435520894.1;Ontology_term=GO:0006812,GO:0055085,GO:1902600,GO:0015297,GO:0016020;end_range=242,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405009.1;locus_tag=LDO38_RS30335;partial=true;product=cation:proton antiporter domain-containing protein;protein_id=WP_435520894.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000043.1 RefSeq gene 253 1164 . - . ID=gene-LDO38_RS04700;Name=LDO38_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04700;old_locus_tag=BVI2075_1370002;partial=true;start_range=.,253 NZ_CAJZAL010000043.1 Protein Homology CDS 253 1164 . - 0 ID=cds-WP_435520895.1;Parent=gene-LDO38_RS04700;Dbxref=GenBank:WP_435520895.1;Name=WP_435520895.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405009.1;locus_tag=LDO38_RS04700;partial=true;product=cation:proton antiporter;protein_id=WP_435520895.1;start_range=.,253;transl_table=11 NZ_CAJZAL010000043.1 RefSeq gene 1161 1424 . - . ID=gene-LDO38_RS04705;Name=LDO38_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04705;old_locus_tag=BVI2075_1370003 NZ_CAJZAL010000043.1 Protein Homology CDS 1161 1424 . - 0 ID=cds-WP_011884402.1;Parent=gene-LDO38_RS04705;Dbxref=GenBank:WP_011884402.1;Name=WP_011884402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884402.1;locus_tag=LDO38_RS04705;product=DUF1427 family protein;protein_id=WP_011884402.1;transl_table=11 NZ_CAJZAL010000043.1 RefSeq gene 1576 1965 . - . ID=gene-LDO38_RS04710;Name=LDO38_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04710 NZ_CAJZAL010000043.1 GeneMarkS-2+ CDS 1576 1965 . - 0 ID=cds-WP_176025647.1;Parent=gene-LDO38_RS04710;Dbxref=GenBank:WP_176025647.1;Name=WP_176025647.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS04710;product=hypothetical protein;protein_id=WP_176025647.1;transl_table=11 NZ_CAJZAL010000043.1 RefSeq gene 2098 3012 . + . ID=gene-LDO38_RS04715;Name=LDO38_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04715;old_locus_tag=BVI2075_1370005 NZ_CAJZAL010000043.1 Protein Homology CDS 2098 3012 . + 0 ID=cds-WP_011884404.1;Parent=gene-LDO38_RS04715;Dbxref=GenBank:WP_011884404.1;Name=WP_011884404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756028.1;locus_tag=LDO38_RS04715;product=VOC family protein;protein_id=WP_011884404.1;transl_table=11 NZ_CAJZAL010000043.1 RefSeq gene 3009 3689 . + . ID=gene-LDO38_RS04720;Name=LDO38_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04720;old_locus_tag=BVI2075_1370006 NZ_CAJZAL010000043.1 Protein Homology CDS 3009 3689 . + 0 ID=cds-WP_011884406.1;Parent=gene-LDO38_RS04720;Dbxref=GenBank:WP_011884406.1;Name=WP_011884406.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897305.1;locus_tag=LDO38_RS04720;product=YoaK family protein;protein_id=WP_011884406.1;transl_table=11 NZ_CAJZAL010000043.1 RefSeq gene 4104 5690 . - . ID=gene-LDO38_RS04725;Name=LDO38_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04725;old_locus_tag=BVI2075_1370007 NZ_CAJZAL010000043.1 Protein Homology CDS 4104 5690 . - 0 ID=cds-WP_011884408.1;Parent=gene-LDO38_RS04725;Dbxref=GenBank:WP_011884408.1;Name=WP_011884408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694259.1;locus_tag=LDO38_RS04725;product=acid phosphatase;protein_id=WP_011884408.1;transl_table=11 NZ_CAJZAL010000043.1 RefSeq gene 5909 7270 . + . ID=gene-LDO38_RS04730;Name=LDO38_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04730;old_locus_tag=BVI2075_1370008 NZ_CAJZAL010000043.1 Protein Homology CDS 5909 7270 . + 0 ID=cds-WP_069246211.1;Parent=gene-LDO38_RS04730;Dbxref=GenBank:WP_069246211.1;Name=WP_069246211.1;Ontology_term=GO:0004130,GO:0016491,GO:0020037;gbkey=CDS;go_function=cytochrome-c peroxidase activity|0004130||IEA,oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884409.1;locus_tag=LDO38_RS04730;product=cytochrome-c peroxidase;protein_id=WP_069246211.1;transl_table=11 NZ_CAJZAL010000043.1 RefSeq gene 7427 7813 . + . ID=gene-LDO38_RS04735;Name=LDO38_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04735;old_locus_tag=BVI2075_1370010 NZ_CAJZAL010000043.1 Protein Homology CDS 7427 7813 . + 0 ID=cds-WP_011884411.1;Parent=gene-LDO38_RS04735;Dbxref=GenBank:WP_011884411.1;Name=WP_011884411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897301.1;locus_tag=LDO38_RS04735;product=RT0821/Lpp0805 family surface protein;protein_id=WP_011884411.1;transl_table=11 NZ_CAJZAL010000043.1 RefSeq gene 7825 8295 . + . ID=gene-LDO38_RS04740;Name=LDO38_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04740;old_locus_tag=BVI2075_1370009 NZ_CAJZAL010000043.1 Protein Homology CDS 7825 8295 . + 0 ID=cds-WP_011884413.1;Parent=gene-LDO38_RS04740;Dbxref=GenBank:WP_011884413.1;Name=WP_011884413.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656603.1;locus_tag=LDO38_RS04740;product=NUDIX hydrolase;protein_id=WP_011884413.1;transl_table=11 NZ_CAJZAL010000043.1 RefSeq gene 8430 10139 . - . ID=gene-LDO38_RS04745;Name=LDO38_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04745;old_locus_tag=BVI2075_1370011 NZ_CAJZAL010000043.1 Protein Homology CDS 8430 10139 . - 0 ID=cds-WP_011884416.1;Parent=gene-LDO38_RS04745;Dbxref=GenBank:WP_011884416.1;Name=WP_011884416.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764572.1;locus_tag=LDO38_RS04745;product=glutamine--tRNA ligase/YqeY domain fusion protein;protein_id=WP_011884416.1;transl_table=11 NZ_CAJZAL010000043.1 RefSeq gene 10392 10601 . + . ID=gene-LDO38_RS04750;Name=LDO38_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04750;old_locus_tag=BVI2075_1370012 NZ_CAJZAL010000043.1 Protein Homology CDS 10392 10601 . + 0 ID=cds-WP_011884418.1;Parent=gene-LDO38_RS04750;Dbxref=GenBank:WP_011884418.1;Name=WP_011884418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884418.1;locus_tag=LDO38_RS04750;product=ornithine acetyltransferase;protein_id=WP_011884418.1;transl_table=11 NZ_CAJZAL010000043.1 RefSeq gene 10770 11333 . + . ID=gene-LDO38_RS04755;Name=LDO38_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04755;old_locus_tag=BVI2075_1370013 NZ_CAJZAL010000043.1 Protein Homology CDS 10770 11333 . + 0 ID=cds-WP_011884419.1;Parent=gene-LDO38_RS04755;Dbxref=GenBank:WP_011884419.1;Name=WP_011884419.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722858.1;locus_tag=LDO38_RS04755;product=RBBP9/YdeN family alpha/beta hydrolase;protein_id=WP_011884419.1;transl_table=11 NZ_CAJZAL010000043.1 RefSeq gene 11568 12788 . - . ID=gene-LDO38_RS04760;Name=LDO38_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04760;old_locus_tag=BVI2075_1370015 NZ_CAJZAL010000043.1 Protein Homology CDS 11568 12788 . - 0 ID=cds-WP_011884420.1;Parent=gene-LDO38_RS04760;Dbxref=GenBank:WP_011884420.1;Name=WP_011884420.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754069.1;locus_tag=LDO38_RS04760;product=CaiB/BaiF CoA transferase family protein;protein_id=WP_011884420.1;transl_table=11 NZ_CAJZAL010000043.1 RefSeq gene 13026 15650 . + . ID=gene-LDO38_RS04765;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=LDO38_RS04765;old_locus_tag=BVI2075_1370016 NZ_CAJZAL010000043.1 Protein Homology CDS 13026 15650 . + 0 ID=cds-WP_034193300.1;Parent=gene-LDO38_RS04765;Dbxref=GenBank:WP_034193300.1;Name=WP_034193300.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401005.1;locus_tag=LDO38_RS04765;product=alanine--tRNA ligase;protein_id=WP_034193300.1;transl_table=11 NZ_CAJZAL010000043.1 RefSeq gene 16041 16955 . - . ID=gene-LDO38_RS04770;Name=LDO38_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04770;old_locus_tag=BVI2075_1370017 NZ_CAJZAL010000043.1 Protein Homology CDS 16041 16955 . - 0 ID=cds-WP_060082413.1;Parent=gene-LDO38_RS04770;Dbxref=GenBank:WP_060082413.1;Name=WP_060082413.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722862.1;locus_tag=LDO38_RS04770;product=LysR family transcriptional regulator;protein_id=WP_060082413.1;transl_table=11 ##sequence-region NZ_CAJZAL010000044.1 1 8832 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000044.1 RefSeq region 1 8832 . + . ID=NZ_CAJZAL010000044.1:1..8832;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_138 NZ_CAJZAL010000044.1 RefSeq pseudogene 1 169 . + . ID=gene-LDO38_RS04775;Name=LDO38_RS04775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS04775;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000044.1 Protein Homology CDS 1 169 . + 1 ID=cds-LDO38_RS04775;Parent=gene-LDO38_RS04775;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025230.1;locus_tag=LDO38_RS04775;partial=true;product=thiamine-phosphate kinase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000044.1 RefSeq gene 159 704 . + . ID=gene-LDO38_RS04780;Name=LDO38_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04780;old_locus_tag=BVI2075_1380002 NZ_CAJZAL010000044.1 Protein Homology CDS 159 704 . + 0 ID=cds-WP_034194167.1;Parent=gene-LDO38_RS04780;Dbxref=GenBank:WP_034194167.1;Name=WP_034194167.1;Ontology_term=GO:0006644,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=phospholipid metabolic process|0006644||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415689.1;locus_tag=LDO38_RS04780;product=phosphatidylglycerophosphatase A family protein;protein_id=WP_034194167.1;transl_table=11 NZ_CAJZAL010000044.1 RefSeq gene 736 1236 . + . ID=gene-LDO38_RS04785;Name=LDO38_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04785;old_locus_tag=BVI2075_1380003 NZ_CAJZAL010000044.1 Protein Homology CDS 736 1236 . + 0 ID=cds-WP_011883241.1;Parent=gene-LDO38_RS04785;Dbxref=GenBank:WP_011883241.1;Name=WP_011883241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333528.1;locus_tag=LDO38_RS04785;product=CinA family protein;protein_id=WP_011883241.1;transl_table=11 NZ_CAJZAL010000044.1 RefSeq gene 1512 2339 . - . ID=gene-LDO38_RS04790;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=LDO38_RS04790;old_locus_tag=BVI2075_1380004 NZ_CAJZAL010000044.1 Protein Homology CDS 1512 2339 . - 0 ID=cds-WP_011883240.1;Parent=gene-LDO38_RS04790;Dbxref=GenBank:WP_011883240.1;Name=WP_011883240.1;Ontology_term=GO:0006221,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009971072.1;locus_tag=LDO38_RS04790;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_011883240.1;transl_table=11 NZ_CAJZAL010000044.1 RefSeq gene 2379 3440 . - . ID=gene-LDO38_RS04795;Name=LDO38_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04795;old_locus_tag=BVI2075_1380005 NZ_CAJZAL010000044.1 Protein Homology CDS 2379 3440 . - 0 ID=cds-WP_059622016.1;Parent=gene-LDO38_RS04795;Dbxref=GenBank:WP_059622016.1;Name=WP_059622016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476953.1;locus_tag=LDO38_RS04795;product=aldose 1-epimerase;protein_id=WP_059622016.1;transl_table=11 NZ_CAJZAL010000044.1 RefSeq gene 3514 4311 . - . ID=gene-LDO38_RS04800;Name=LDO38_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04800;old_locus_tag=BVI2075_1380007 NZ_CAJZAL010000044.1 Protein Homology CDS 3514 4311 . - 0 ID=cds-WP_176316706.1;Parent=gene-LDO38_RS04800;Dbxref=GenBank:WP_176316706.1;Name=WP_176316706.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400374.1;locus_tag=LDO38_RS04800;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_176316706.1;transl_table=11 NZ_CAJZAL010000044.1 RefSeq gene 4335 5351 . - . ID=gene-LDO38_RS04805;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=LDO38_RS04805;old_locus_tag=BVI2075_1380008 NZ_CAJZAL010000044.1 Protein Homology CDS 4335 5351 . - 0 ID=cds-WP_011883237.1;Parent=gene-LDO38_RS04805;Dbxref=GenBank:WP_011883237.1;Name=WP_011883237.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=araH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025224.1;locus_tag=LDO38_RS04805;product=L-arabinose ABC transporter permease AraH;protein_id=WP_011883237.1;transl_table=11 NZ_CAJZAL010000044.1 RefSeq gene 5431 6942 . - . ID=gene-LDO38_RS04810;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=LDO38_RS04810;old_locus_tag=BVI2075_1380009 NZ_CAJZAL010000044.1 Protein Homology CDS 5431 6942 . - 0 ID=cds-WP_011883236.1;Parent=gene-LDO38_RS04810;Dbxref=GenBank:WP_011883236.1;Name=WP_011883236.1;Ontology_term=GO:0042882,GO:0005524,GO:0015612,GO:0016020;gbkey=CDS;gene=araG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type L-arabinose transporter activity|0015612||IEA;go_process=L-arabinose transmembrane transport|0042882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350895.1;locus_tag=LDO38_RS04810;product=L-arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_011883236.1;transl_table=11 NZ_CAJZAL010000044.1 RefSeq gene 7018 8013 . - . ID=gene-LDO38_RS04815;Name=LDO38_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04815;old_locus_tag=BVI2075_1380010 NZ_CAJZAL010000044.1 Protein Homology CDS 7018 8013 . - 0 ID=cds-WP_011883235.1;Parent=gene-LDO38_RS04815;Dbxref=GenBank:WP_011883235.1;Name=WP_011883235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761975.1;locus_tag=LDO38_RS04815;product=arabinose ABC transporter substrate-binding protein;protein_id=WP_011883235.1;transl_table=11 NZ_CAJZAL010000044.1 RefSeq gene 8125 8832 . - . ID=gene-LDO38_RS04820;Name=LDO38_RS04820;end_range=8832,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04820;old_locus_tag=BVI2075_1380011;partial=true NZ_CAJZAL010000044.1 Protein Homology CDS 8125 8832 . - 0 ID=cds-WP_224056219.1;Parent=gene-LDO38_RS04820;Dbxref=GenBank:WP_224056219.1;Name=WP_224056219.1;Ontology_term=GO:0016491;end_range=8832,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527760.1;locus_tag=LDO38_RS04820;partial=true;product=SDR family oxidoreductase;protein_id=WP_224056219.1;transl_table=11 ##sequence-region NZ_CAJZAL010000045.1 1 7890 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000045.1 RefSeq region 1 7890 . + . ID=NZ_CAJZAL010000045.1:1..7890;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_139 NZ_CAJZAL010000045.1 RefSeq gene 1 547 . + . ID=gene-LDO38_RS04825;Name=LDO38_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04825;old_locus_tag=BVI2075_1390001;partial=true;start_range=.,1 NZ_CAJZAL010000045.1 Protein Homology CDS 1 547 . + 1 ID=cds-WP_224056220.1;Parent=gene-LDO38_RS04825;Dbxref=GenBank:WP_224056220.1;Name=WP_224056220.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880374.1;locus_tag=LDO38_RS04825;partial=true;product=HlyD family secretion protein;protein_id=WP_224056220.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000045.1 RefSeq gene 544 3375 . + . ID=gene-LDO38_RS04830;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=LDO38_RS04830;old_locus_tag=BVI2075_1390002 NZ_CAJZAL010000045.1 Protein Homology CDS 544 3375 . + 0 ID=cds-WP_059463986.1;Parent=gene-LDO38_RS04830;Dbxref=GenBank:WP_059463986.1;Name=WP_059463986.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726013.1;locus_tag=LDO38_RS04830;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_059463986.1;transl_table=11 NZ_CAJZAL010000045.1 RefSeq gene 3378 4502 . + . ID=gene-LDO38_RS04835;Name=LDO38_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04835;old_locus_tag=BVI2075_1390003 NZ_CAJZAL010000045.1 Protein Homology CDS 3378 4502 . + 0 ID=cds-WP_011880376.1;Parent=gene-LDO38_RS04835;Dbxref=GenBank:WP_011880376.1;Name=WP_011880376.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007176440.1;locus_tag=LDO38_RS04835;product=ABC transporter permease;protein_id=WP_011880376.1;transl_table=11 NZ_CAJZAL010000045.1 RefSeq gene 4653 4838 . + . ID=gene-LDO38_RS04840;Name=LDO38_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04840;old_locus_tag=BVI2075_1390005 NZ_CAJZAL010000045.1 Protein Homology CDS 4653 4838 . + 0 ID=cds-WP_014726014.1;Parent=gene-LDO38_RS04840;Dbxref=GenBank:WP_014726014.1;Name=WP_014726014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880377.1;locus_tag=LDO38_RS04840;product=DUF2964 family protein;protein_id=WP_014726014.1;transl_table=11 NZ_CAJZAL010000045.1 RefSeq gene 4869 6005 . + . ID=gene-LDO38_RS04845;Name=LDO38_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04845;old_locus_tag=BVI2075_1390006 NZ_CAJZAL010000045.1 Protein Homology CDS 4869 6005 . + 0 ID=cds-WP_011880378.1;Parent=gene-LDO38_RS04845;Dbxref=GenBank:WP_011880378.1;Name=WP_011880378.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853754.1;locus_tag=LDO38_RS04845;product=ABC transporter permease;protein_id=WP_011880378.1;transl_table=11 NZ_CAJZAL010000045.1 RefSeq gene 6002 6706 . + . ID=gene-LDO38_RS04850;Name=LDO38_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04850;old_locus_tag=BVI2075_1390004 NZ_CAJZAL010000045.1 Protein Homology CDS 6002 6706 . + 0 ID=cds-WP_172820474.1;Parent=gene-LDO38_RS04850;Dbxref=GenBank:WP_172820474.1;Name=WP_172820474.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415426.1;locus_tag=LDO38_RS04850;product=ABC transporter ATP-binding protein;protein_id=WP_172820474.1;transl_table=11 NZ_CAJZAL010000045.1 RefSeq gene 6703 7708 . + . ID=gene-LDO38_RS04855;Name=LDO38_RS04855;end_range=7708,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04855;partial=true NZ_CAJZAL010000045.1 Protein Homology CDS 6703 7708 . + 0 ID=cds-WP_435520896.1;Parent=gene-LDO38_RS04855;Dbxref=GenBank:WP_435520896.1;Name=WP_435520896.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=7708,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525002.1;locus_tag=LDO38_RS04855;partial=true;product=HlyD family secretion protein;protein_id=WP_435520896.1;transl_table=11 ##sequence-region NZ_CAJZAL010000046.1 1 48687 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000046.1 RefSeq region 1 48687 . + . ID=NZ_CAJZAL010000046.1:1..48687;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_14 NZ_CAJZAL010000046.1 RefSeq pseudogene 1 1451 . - . ID=gene-LDO38_RS04860;Name=LDO38_RS04860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS04860;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000046.1 Protein Homology CDS 1 1451 . - 0 ID=cds-LDO38_RS04860;Parent=gene-LDO38_RS04860;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017476.6;locus_tag=LDO38_RS04860;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq pseudogene 1485 1589 . - . ID=gene-LDO38_RS30145;Name=LDO38_RS30145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30145;partial=true;pseudo=true;start_range=.,1485 NZ_CAJZAL010000046.1 Protein Homology CDS 1485 1589 . - 0 ID=cds-LDO38_RS30145;Parent=gene-LDO38_RS30145;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024418.6;locus_tag=LDO38_RS30145;partial=true;product=ESPR domain-containing protein;pseudo=true;start_range=.,1485;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 2546 2818 . + . ID=gene-LDO38_RS04870;Name=LDO38_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04870 NZ_CAJZAL010000046.1 GeneMarkS-2+ CDS 2546 2818 . + 0 ID=cds-WP_139164723.1;Parent=gene-LDO38_RS04870;Dbxref=GenBank:WP_139164723.1;Name=WP_139164723.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS04870;product=hypothetical protein;protein_id=WP_139164723.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 3163 4236 . + . ID=gene-LDO38_RS04875;Name=LDO38_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04875;old_locus_tag=BVI2075_140006 NZ_CAJZAL010000046.1 Protein Homology CDS 3163 4236 . + 0 ID=cds-WP_224056221.1;Parent=gene-LDO38_RS04875;Dbxref=GenBank:WP_224056221.1;Name=WP_224056221.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498397.1;locus_tag=LDO38_RS04875;product=Dyp-type peroxidase;protein_id=WP_224056221.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 4229 5044 . + . ID=gene-LDO38_RS04880;Name=LDO38_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04880;old_locus_tag=BVI2075_140007 NZ_CAJZAL010000046.1 Protein Homology CDS 4229 5044 . + 0 ID=cds-WP_014725646.1;Parent=gene-LDO38_RS04880;Dbxref=GenBank:WP_014725646.1;Name=WP_014725646.1;Ontology_term=GO:0140737;gbkey=CDS;go_component=encapsulin nanocompartment|0140737||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725646.1;locus_tag=LDO38_RS04880;product=family 1 encapsulin nanocompartment shell protein;protein_id=WP_014725646.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 5250 6671 . - . ID=gene-LDO38_RS04885;Name=LDO38_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04885;old_locus_tag=BVI2075_140008 NZ_CAJZAL010000046.1 Protein Homology CDS 5250 6671 . - 0 ID=cds-WP_224056222.1;Parent=gene-LDO38_RS04885;Dbxref=GenBank:WP_224056222.1;Name=WP_224056222.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407378.1;locus_tag=LDO38_RS04885;product=purine-cytosine permease family protein;protein_id=WP_224056222.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 6987 7910 . + . ID=gene-LDO38_RS04890;Name=LDO38_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04890;old_locus_tag=BVI2075_140009 NZ_CAJZAL010000046.1 Protein Homology CDS 6987 7910 . + 0 ID=cds-WP_034195632.1;Parent=gene-LDO38_RS04890;Dbxref=GenBank:WP_034195632.1;Name=WP_034195632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372721.1;locus_tag=LDO38_RS04890;product=LysR substrate-binding domain-containing protein;protein_id=WP_034195632.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 7933 9096 . - . ID=gene-LDO38_RS04895;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=LDO38_RS04895;old_locus_tag=BVI2075_140010 NZ_CAJZAL010000046.1 Protein Homology CDS 7933 9096 . - 0 ID=cds-WP_224056223.1;Parent=gene-LDO38_RS04895;Dbxref=GenBank:WP_224056223.1;Name=WP_224056223.1;Ontology_term=GO:0006526,GO:0006592,GO:0008777;gbkey=CDS;gene=argE;go_function=acetylornithine deacetylase activity|0008777||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725642.1;locus_tag=LDO38_RS04895;product=acetylornithine deacetylase;protein_id=WP_224056223.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 9089 9766 . - . ID=gene-LDO38_RS04900;Name=LDO38_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04900;old_locus_tag=BVI2075_140011 NZ_CAJZAL010000046.1 Protein Homology CDS 9089 9766 . - 0 ID=cds-WP_014725641.1;Parent=gene-LDO38_RS04900;Dbxref=GenBank:WP_014725641.1;Name=WP_014725641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767485.1;locus_tag=LDO38_RS04900;product=DUF1028 domain-containing protein;protein_id=WP_014725641.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 9763 10224 . - . ID=gene-LDO38_RS04905;Name=LDO38_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04905;old_locus_tag=BVI2075_140012 NZ_CAJZAL010000046.1 Protein Homology CDS 9763 10224 . - 0 ID=cds-WP_034195625.1;Parent=gene-LDO38_RS04905;Dbxref=GenBank:WP_034195625.1;Name=WP_034195625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879824.1;locus_tag=LDO38_RS04905;product=RidA family protein;protein_id=WP_034195625.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 10308 11654 . - . ID=gene-LDO38_RS04910;Name=LDO38_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04910;old_locus_tag=BVI2075_140013 NZ_CAJZAL010000046.1 Protein Homology CDS 10308 11654 . - 0 ID=cds-WP_034195624.1;Parent=gene-LDO38_RS04910;Dbxref=GenBank:WP_034195624.1;Name=WP_034195624.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349681.1;locus_tag=LDO38_RS04910;product=flavin-containing monooxygenase;protein_id=WP_034195624.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 12015 13028 . + . ID=gene-LDO38_RS04915;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=LDO38_RS04915;old_locus_tag=BVI2075_140014 NZ_CAJZAL010000046.1 Protein Homology CDS 12015 13028 . + 0 ID=cds-WP_014725637.1;Parent=gene-LDO38_RS04915;Dbxref=GenBank:WP_014725637.1;Name=WP_014725637.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660578.1;locus_tag=LDO38_RS04915;product=tryptophan--tRNA ligase;protein_id=WP_014725637.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 13115 15628 . - . ID=gene-LDO38_RS04920;Name=LDO38_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04920;old_locus_tag=BVI2075_140016 NZ_CAJZAL010000046.1 Protein Homology CDS 13115 15628 . - 0 ID=cds-WP_014725636.1;Parent=gene-LDO38_RS04920;Dbxref=GenBank:WP_014725636.1;Name=WP_014725636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725636.1;locus_tag=LDO38_RS04920;product=EAL domain-containing protein;protein_id=WP_014725636.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 16028 16948 . - . ID=gene-LDO38_RS04925;Name=LDO38_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04925;old_locus_tag=BVI2075_140019 NZ_CAJZAL010000046.1 Protein Homology CDS 16028 16948 . - 0 ID=cds-WP_034195622.1;Parent=gene-LDO38_RS04925;Dbxref=GenBank:WP_034195622.1;Name=WP_034195622.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725634.1;locus_tag=LDO38_RS04925;product=LysR family transcriptional regulator;protein_id=WP_034195622.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 17374 19959 . + . ID=gene-LDO38_RS04930;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=LDO38_RS04930;old_locus_tag=BVI2075_140021 NZ_CAJZAL010000046.1 Protein Homology CDS 17374 19959 . + 0 ID=cds-WP_011879819.1;Parent=gene-LDO38_RS04930;Dbxref=GenBank:WP_011879819.1;Name=WP_011879819.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004633909.1;locus_tag=LDO38_RS04930;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_011879819.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 20124 20636 . - . ID=gene-LDO38_RS04935;Name=LDO38_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04935;old_locus_tag=BVI2075_140022 NZ_CAJZAL010000046.1 Protein Homology CDS 20124 20636 . - 0 ID=cds-WP_176000573.1;Parent=gene-LDO38_RS04935;Dbxref=GenBank:WP_176000573.1;Name=WP_176000573.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725633.1;locus_tag=LDO38_RS04935;product=chemotaxis protein CheW;protein_id=WP_176000573.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 20673 22394 . - . ID=gene-LDO38_RS04940;Name=LDO38_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04940;old_locus_tag=BVI2075_140023 NZ_CAJZAL010000046.1 Protein Homology CDS 20673 22394 . - 0 ID=cds-WP_224056224.1;Parent=gene-LDO38_RS04940;Dbxref=GenBank:WP_224056224.1;Name=WP_224056224.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193473.1;locus_tag=LDO38_RS04940;product=methyl-accepting chemotaxis protein;protein_id=WP_224056224.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq pseudogene 22726 22994 . + . ID=gene-LDO38_RS04945;Name=LDO38_RS04945;end_range=22994,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS04945;partial=true;pseudo=true;start_range=.,22726 NZ_CAJZAL010000046.1 Protein Homology CDS 22726 22994 . + 0 ID=cds-LDO38_RS04945;Parent=gene-LDO38_RS04945;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=22994,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094623.1;locus_tag=LDO38_RS04945;partial=true;product=transposase;pseudo=true;start_range=.,22726;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 23025 24185 . - . ID=gene-LDO38_RS04950;Name=LDO38_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04950;old_locus_tag=BVI2075_140025 NZ_CAJZAL010000046.1 Protein Homology CDS 23025 24185 . - 0 ID=cds-WP_014725631.1;Parent=gene-LDO38_RS04950;Dbxref=GenBank:WP_014725631.1;Name=WP_014725631.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363591.1;locus_tag=LDO38_RS04950;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_014725631.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 24188 27157 . - . ID=gene-LDO38_RS04955;Name=LDO38_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04955;old_locus_tag=BVI2075_140026 NZ_CAJZAL010000046.1 Protein Homology CDS 24188 27157 . - 0 ID=cds-WP_224056225.1;Parent=gene-LDO38_RS04955;Dbxref=GenBank:WP_224056225.1;Name=WP_224056225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725630.1;locus_tag=LDO38_RS04955;product=PAS domain S-box protein;protein_id=WP_224056225.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 27170 32173 . - . ID=gene-LDO38_RS04960;Name=LDO38_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04960;old_locus_tag=BVI2075_140027 NZ_CAJZAL010000046.1 Protein Homology CDS 27170 32173 . - 0 ID=cds-WP_224056226.1;Parent=gene-LDO38_RS04960;Dbxref=GenBank:WP_224056226.1;Name=WP_224056226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725629.1;locus_tag=LDO38_RS04960;product=AAA family ATPase;protein_id=WP_224056226.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 32192 32872 . - . ID=gene-LDO38_RS04965;Name=LDO38_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04965;old_locus_tag=BVI2075_140028 NZ_CAJZAL010000046.1 Protein Homology CDS 32192 32872 . - 0 ID=cds-WP_011879813.1;Parent=gene-LDO38_RS04965;Dbxref=GenBank:WP_011879813.1;Name=WP_011879813.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363588.1;locus_tag=LDO38_RS04965;product=response regulator transcription factor;protein_id=WP_011879813.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 33149 34660 . + . ID=gene-LDO38_RS04970;Name=LDO38_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04970;old_locus_tag=BVI2075_140030 NZ_CAJZAL010000046.1 Protein Homology CDS 33149 34660 . + 0 ID=cds-WP_224056227.1;Parent=gene-LDO38_RS04970;Dbxref=GenBank:WP_224056227.1;Name=WP_224056227.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363587.1;locus_tag=LDO38_RS04970;product=ATP-binding protein;protein_id=WP_224056227.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq pseudogene 34753 34866 . + . ID=gene-LDO38_RS04975;Name=LDO38_RS04975;end_range=34866,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS04975;partial=true;pseudo=true;start_range=.,34753 NZ_CAJZAL010000046.1 Protein Homology CDS 34753 34866 . + 0 ID=cds-LDO38_RS04975;Parent=gene-LDO38_RS04975;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=34866,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013091837.1;locus_tag=LDO38_RS04975;partial=true;product=branched-chain amino acid ABC transporter substrate-binding protein;pseudo=true;start_range=.,34753;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 34925 35836 . - . ID=gene-LDO38_RS04980;Name=LDO38_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04980;old_locus_tag=BVI2075_140031 NZ_CAJZAL010000046.1 Protein Homology CDS 34925 35836 . - 0 ID=cds-WP_212167469.1;Parent=gene-LDO38_RS04980;Dbxref=GenBank:WP_212167469.1;Name=WP_212167469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753109.1;locus_tag=LDO38_RS04980;product=hypothetical protein;protein_id=WP_212167469.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 35907 36230 . - . ID=gene-LDO38_RS04985;Name=LDO38_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04985;old_locus_tag=BVI2075_140032 NZ_CAJZAL010000046.1 Protein Homology CDS 35907 36230 . - 0 ID=cds-WP_059463928.1;Parent=gene-LDO38_RS04985;Dbxref=GenBank:WP_059463928.1;Name=WP_059463928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481332.1;locus_tag=LDO38_RS04985;product=TfoX/Sxy family protein;protein_id=WP_059463928.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 36535 37800 . - . ID=gene-LDO38_RS04990;Name=LDO38_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04990;old_locus_tag=BVI2075_140034 NZ_CAJZAL010000046.1 Protein Homology CDS 36535 37800 . - 0 ID=cds-WP_014725622.1;Parent=gene-LDO38_RS04990;Dbxref=GenBank:WP_014725622.1;Name=WP_014725622.1;Ontology_term=GO:0055085,GO:0015112,GO:0022857;gbkey=CDS;go_function=nitrate transmembrane transporter activity|0015112||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879809.1;locus_tag=LDO38_RS04990;product=MFS transporter;protein_id=WP_014725622.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 37816 38604 . - . ID=gene-LDO38_RS04995;Name=LDO38_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS04995;old_locus_tag=BVI2075_140035 NZ_CAJZAL010000046.1 Protein Homology CDS 37816 38604 . - 0 ID=cds-WP_014725621.1;Parent=gene-LDO38_RS04995;Dbxref=GenBank:WP_014725621.1;Name=WP_014725621.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402923.1;locus_tag=LDO38_RS04995;product=peptidylprolyl isomerase;protein_id=WP_014725621.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 38615 39298 . - . ID=gene-LDO38_RS05000;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=LDO38_RS05000;old_locus_tag=BVI2075_140036 NZ_CAJZAL010000046.1 Protein Homology CDS 38615 39298 . - 0 ID=cds-WP_224056228.1;Parent=gene-LDO38_RS05000;Dbxref=GenBank:WP_224056228.1;Name=WP_224056228.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004528383.1;locus_tag=LDO38_RS05000;product=respiratory nitrate reductase subunit gamma;protein_id=WP_224056228.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 39325 40020 . - . ID=gene-LDO38_RS05005;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=LDO38_RS05005;old_locus_tag=BVI2075_140037 NZ_CAJZAL010000046.1 Protein Homology CDS 39325 40020 . - 0 ID=cds-WP_014725619.1;Parent=gene-LDO38_RS05005;Dbxref=GenBank:WP_014725619.1;Name=WP_014725619.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402921.1;locus_tag=LDO38_RS05005;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_014725619.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 40017 41546 . - . ID=gene-LDO38_RS05010;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=LDO38_RS05010;old_locus_tag=BVI2075_140038 NZ_CAJZAL010000046.1 Protein Homology CDS 40017 41546 . - 0 ID=cds-WP_059702411.1;Parent=gene-LDO38_RS05010;Dbxref=GenBank:WP_059702411.1;Name=WP_059702411.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011205549.1;locus_tag=LDO38_RS05010;product=nitrate reductase subunit beta;protein_id=WP_059702411.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 41543 45307 . - . ID=gene-LDO38_RS05015;Name=LDO38_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05015;old_locus_tag=BVI2075_140039 NZ_CAJZAL010000046.1 Protein Homology CDS 41543 45307 . - 0 ID=cds-WP_034195610.1;Parent=gene-LDO38_RS05015;Dbxref=GenBank:WP_034195610.1;Name=WP_034195610.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217825.1;locus_tag=LDO38_RS05015;product=nitrate reductase subunit alpha;protein_id=WP_034195610.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 46331 46522 . - . ID=gene-LDO38_RS05020;Name=LDO38_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05020;old_locus_tag=BVI2075_140042 NZ_CAJZAL010000046.1 Protein Homology CDS 46331 46522 . - 0 ID=cds-WP_011879803.1;Parent=gene-LDO38_RS05020;Dbxref=GenBank:WP_011879803.1;Name=WP_011879803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879803.1;locus_tag=LDO38_RS05020;product=DUF2964 family protein;protein_id=WP_011879803.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 46539 47015 . - . ID=gene-LDO38_RS05025;Name=LDO38_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05025;old_locus_tag=BVI2075_140043 NZ_CAJZAL010000046.1 Protein Homology CDS 46539 47015 . - 0 ID=cds-WP_014725615.1;Parent=gene-LDO38_RS05025;Dbxref=GenBank:WP_014725615.1;Name=WP_014725615.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879802.1;locus_tag=LDO38_RS05025;product=universal stress protein;protein_id=WP_014725615.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq gene 47243 47941 . + . ID=gene-LDO38_RS05030;Name=LDO38_RS05030;end_range=47941,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05030;old_locus_tag=BVI2075_140044;partial=true NZ_CAJZAL010000046.1 Protein Homology CDS 47243 47941 . + 0 ID=cds-WP_224056229.1;Parent=gene-LDO38_RS05030;Dbxref=GenBank:WP_224056229.1;Name=WP_224056229.1;end_range=47941,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372760.1;locus_tag=LDO38_RS05030;partial=true;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_224056229.1;transl_table=11 NZ_CAJZAL010000046.1 RefSeq pseudogene 48302 48482 . + . ID=gene-LDO38_RS30340;Name=LDO38_RS30340;end_range=48482,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30340;old_locus_tag=BVI2075_140045;partial=true;pseudo=true NZ_CAJZAL010000046.1 Protein Homology CDS 48302 48482 . + 0 ID=cds-LDO38_RS30340;Parent=gene-LDO38_RS30340;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=48482,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010095476.1;locus_tag=LDO38_RS30340;partial=true;product=3-deoxy-D-arabino-heptulosonate 7-phosphate synthase;pseudo=true;transl_table=11 NZ_CAJZAL010000046.1 RefSeq pseudogene 48493 48687 . + . ID=gene-LDO38_RS30345;Name=LDO38_RS30345;end_range=48687,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30345;partial=true;pseudo=true;start_range=.,48493 NZ_CAJZAL010000046.1 Protein Homology CDS 48493 48687 . + 2 ID=cds-LDO38_RS30345;Parent=gene-LDO38_RS30345;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=48687,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337505.1;locus_tag=LDO38_RS30345;partial=true;product=3-deoxy-D-arabino-heptulosonate 7-phosphate synthase;pseudo=true;start_range=.,48493;transl_table=11 ##sequence-region NZ_CAJZAL010000047.1 1 16207 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000047.1 RefSeq region 1 16207 . + . ID=NZ_CAJZAL010000047.1:1..16207;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_140 NZ_CAJZAL010000047.1 RefSeq gene 1 1407 . - . ID=gene-LDO38_RS05040;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=LDO38_RS05040;partial=true;start_range=.,1 NZ_CAJZAL010000047.1 Protein Homology CDS 1 1407 . - 0 ID=cds-WP_224056230.1;Parent=gene-LDO38_RS05040;Dbxref=GenBank:WP_224056230.1;Name=WP_224056230.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544499.1;locus_tag=LDO38_RS05040;partial=true;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_224056230.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000047.1 RefSeq gene 1436 2605 . - . ID=gene-LDO38_RS05045;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=LDO38_RS05045;old_locus_tag=BVI2075_1400002 NZ_CAJZAL010000047.1 Protein Homology CDS 1436 2605 . - 0 ID=cds-WP_011883174.1;Parent=gene-LDO38_RS05045;Dbxref=GenBank:WP_011883174.1;Name=WP_011883174.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477019.1;locus_tag=LDO38_RS05045;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_011883174.1;transl_table=11 NZ_CAJZAL010000047.1 RefSeq gene 2622 4028 . - . ID=gene-LDO38_RS05050;Name=LDO38_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05050;old_locus_tag=BVI2075_1400003 NZ_CAJZAL010000047.1 Protein Homology CDS 2622 4028 . - 0 ID=cds-WP_034194187.1;Parent=gene-LDO38_RS05050;Dbxref=GenBank:WP_034194187.1;Name=WP_034194187.1;Ontology_term=GO:0009252,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333460.1;locus_tag=LDO38_RS05050;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_034194187.1;transl_table=11 NZ_CAJZAL010000047.1 RefSeq gene 4025 5563 . - . ID=gene-LDO38_RS05055;Name=LDO38_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05055;old_locus_tag=BVI2075_1400004 NZ_CAJZAL010000047.1 Protein Homology CDS 4025 5563 . - 0 ID=cds-WP_011883172.1;Parent=gene-LDO38_RS05055;Dbxref=GenBank:WP_011883172.1;Name=WP_011883172.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602111.1;locus_tag=LDO38_RS05055;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_011883172.1;transl_table=11 NZ_CAJZAL010000047.1 RefSeq gene 5560 7410 . - . ID=gene-LDO38_RS05060;Name=LDO38_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05060;old_locus_tag=BVI2075_1400005 NZ_CAJZAL010000047.1 Protein Homology CDS 5560 7410 . - 0 ID=cds-WP_011883171.1;Parent=gene-LDO38_RS05060;Dbxref=GenBank:WP_011883171.1;Name=WP_011883171.1;Ontology_term=GO:0009252,GO:0051301,GO:0071555,GO:0008658,GO:0008955,GO:0009002,GO:0016787,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532007.1;locus_tag=LDO38_RS05060;product=peptidoglycan D%2CD-transpeptidase FtsI family protein;protein_id=WP_011883171.1;transl_table=11 NZ_CAJZAL010000047.1 RefSeq gene 7407 7748 . - . ID=gene-LDO38_RS05065;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=LDO38_RS05065;old_locus_tag=BVI2075_1400006 NZ_CAJZAL010000047.1 Protein Homology CDS 7407 7748 . - 0 ID=cds-WP_011883170.1;Parent=gene-LDO38_RS05065;Dbxref=GenBank:WP_011883170.1;Name=WP_011883170.1;Ontology_term=GO:0000910,GO:0016020;gbkey=CDS;gene=ftsL;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527786.1;locus_tag=LDO38_RS05065;product=cell division protein FtsL;protein_id=WP_011883170.1;transl_table=11 NZ_CAJZAL010000047.1 RefSeq gene 7745 8686 . - . ID=gene-LDO38_RS05070;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=LDO38_RS05070;old_locus_tag=BVI2075_1400007 NZ_CAJZAL010000047.1 Protein Homology CDS 7745 8686 . - 0 ID=cds-WP_011883169.1;Parent=gene-LDO38_RS05070;Dbxref=GenBank:WP_011883169.1;Name=WP_011883169.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350832.1;locus_tag=LDO38_RS05070;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_011883169.1;transl_table=11 NZ_CAJZAL010000047.1 RefSeq gene 8710 9138 . - . ID=gene-LDO38_RS05075;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=LDO38_RS05075;old_locus_tag=BVI2075_1400008 NZ_CAJZAL010000047.1 Protein Homology CDS 8710 9138 . - 0 ID=cds-WP_006400450.1;Parent=gene-LDO38_RS05075;Dbxref=GenBank:WP_006400450.1;Name=WP_006400450.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255554.1;locus_tag=LDO38_RS05075;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_006400450.1;transl_table=11 NZ_CAJZAL010000047.1 RefSeq gene 9526 10152 . - . ID=gene-LDO38_RS05080;Name=coq7;gbkey=Gene;gene=coq7;gene_biotype=protein_coding;locus_tag=LDO38_RS05080;old_locus_tag=BVI2075_1400009 NZ_CAJZAL010000047.1 Protein Homology CDS 9526 10152 . - 0 ID=cds-WP_014722385.1;Parent=gene-LDO38_RS05080;Dbxref=GenBank:WP_014722385.1;Name=WP_014722385.1;Ontology_term=GO:0006744,GO:0004497;gbkey=CDS;gene=coq7;go_function=monooxygenase activity|0004497||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106632.1;locus_tag=LDO38_RS05080;product=2-polyprenyl-3-methyl-6-methoxy-1%2C4-benzoquinone monooxygenase;protein_id=WP_014722385.1;transl_table=11 NZ_CAJZAL010000047.1 RefSeq gene 10431 11600 . + . ID=gene-LDO38_RS05085;Name=LDO38_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05085;old_locus_tag=BVI2075_1400011 NZ_CAJZAL010000047.1 Protein Homology CDS 10431 11600 . + 0 ID=cds-WP_059476087.1;Parent=gene-LDO38_RS05085;Dbxref=GenBank:WP_059476087.1;Name=WP_059476087.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195141.1;locus_tag=LDO38_RS05085;product=porin;protein_id=WP_059476087.1;transl_table=11 NZ_CAJZAL010000047.1 RefSeq gene 11974 13647 . - . ID=gene-LDO38_RS05090;Name=LDO38_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05090;old_locus_tag=BVI2075_1400012 NZ_CAJZAL010000047.1 Protein Homology CDS 11974 13647 . - 0 ID=cds-WP_069246132.1;Parent=gene-LDO38_RS05090;Dbxref=GenBank:WP_069246132.1;Name=WP_069246132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898193.1;locus_tag=LDO38_RS05090;product=long-chain fatty acid--CoA ligase;protein_id=WP_069246132.1;transl_table=11 NZ_CAJZAL010000047.1 RefSeq gene 13784 15859 . - . ID=gene-LDO38_RS05095;Name=LDO38_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05095;old_locus_tag=BVI2075_1400013 NZ_CAJZAL010000047.1 Protein Homology CDS 13784 15859 . - 0 ID=cds-WP_224056231.1;Parent=gene-LDO38_RS05095;Dbxref=GenBank:WP_224056231.1;Name=WP_224056231.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655882.1;locus_tag=LDO38_RS05095;product=molybdopterin-containing oxidoreductase family protein;protein_id=WP_224056231.1;transl_table=11 ##sequence-region NZ_CAJZAL010000048.1 1 13476 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000048.1 RefSeq region 1 13476 . + . ID=NZ_CAJZAL010000048.1:1..13476;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_141 NZ_CAJZAL010000048.1 RefSeq gene 1 145 . - . ID=gene-LDO38_RS30350;Name=LDO38_RS30350;end_range=145,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30350;partial=true;start_range=.,1 NZ_CAJZAL010000048.1 Protein Homology CDS 1 145 . - 2 ID=cds-WP_435520900.1;Parent=gene-LDO38_RS30350;Dbxref=GenBank:WP_435520900.1;Name=WP_435520900.1;Ontology_term=GO:0005975,GO:0004134;end_range=145,.;gbkey=CDS;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660501.1;locus_tag=LDO38_RS30350;partial=true;product=4-alpha-glucanotransferase;protein_id=WP_435520900.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000048.1 RefSeq gene 156 1561 . - . ID=gene-LDO38_RS05100;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=LDO38_RS05100;old_locus_tag=BVI2075_1410002;partial=true;start_range=.,156 NZ_CAJZAL010000048.1 Protein Homology CDS 156 1561 . - 0 ID=cds-WP_435520898.1;Parent=gene-LDO38_RS05100;Dbxref=GenBank:WP_435520898.1;Name=WP_435520898.1;Ontology_term=GO:0005980,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660501.1;locus_tag=LDO38_RS05100;partial=true;product=4-alpha-glucanotransferase;protein_id=WP_435520898.1;start_range=.,156;transl_table=11 NZ_CAJZAL010000048.1 RefSeq gene 1558 3705 . - . ID=gene-LDO38_RS05105;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=LDO38_RS05105;old_locus_tag=BVI2075_1410003 NZ_CAJZAL010000048.1 Protein Homology CDS 1558 3705 . - 0 ID=cds-WP_224056232.1;Parent=gene-LDO38_RS05105;Dbxref=GenBank:WP_224056232.1;Name=WP_224056232.1;Ontology_term=GO:0005992,GO:0033942;gbkey=CDS;gene=treZ;go_function=4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity|0033942||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725716.1;locus_tag=LDO38_RS05105;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_224056232.1;transl_table=11 NZ_CAJZAL010000048.1 RefSeq gene 3702 5828 . - . ID=gene-LDO38_RS05110;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=LDO38_RS05110;old_locus_tag=BVI2075_1410004 NZ_CAJZAL010000048.1 Protein Homology CDS 3702 5828 . - 0 ID=cds-WP_224056233.1;Parent=gene-LDO38_RS05110;Dbxref=GenBank:WP_224056233.1;Name=WP_224056233.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725717.1;locus_tag=LDO38_RS05110;product=glycogen debranching protein GlgX;protein_id=WP_224056233.1;transl_table=11 NZ_CAJZAL010000048.1 RefSeq gene 5861 7885 . - . ID=gene-LDO38_RS05115;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=LDO38_RS05115;old_locus_tag=BVI2075_1410005 NZ_CAJZAL010000048.1 Protein Homology CDS 5861 7885 . - 0 ID=cds-WP_435520899.1;Parent=gene-LDO38_RS05115;Dbxref=GenBank:WP_435520899.1;Name=WP_435520899.1;Ontology_term=GO:0005975,GO:0005978,GO:0003844,GO:0004553,GO:0043169;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521799.1;locus_tag=LDO38_RS05115;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=WP_435520899.1;transl_table=11 NZ_CAJZAL010000048.1 RefSeq gene 7849 9075 . + . ID=gene-LDO38_RS05125;Name=LDO38_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05125;old_locus_tag=BVI2075_1410006 NZ_CAJZAL010000048.1 Protein Homology CDS 7849 9075 . + 0 ID=cds-WP_069224354.1;Parent=gene-LDO38_RS05125;Dbxref=GenBank:WP_069224354.1;Name=WP_069224354.1;Ontology_term=GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694424.1;locus_tag=LDO38_RS05125;product=patatin-like phospholipase family protein;protein_id=WP_069224354.1;transl_table=11 NZ_CAJZAL010000048.1 RefSeq gene 9644 10522 . + . ID=gene-LDO38_RS05130;Name=LDO38_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05130;old_locus_tag=BVI2075_1410007 NZ_CAJZAL010000048.1 Protein Homology CDS 9644 10522 . + 0 ID=cds-WP_011886157.1;Parent=gene-LDO38_RS05130;Dbxref=GenBank:WP_011886157.1;Name=WP_011886157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334373.1;locus_tag=LDO38_RS05130;product=ferritin;protein_id=WP_011886157.1;transl_table=11 NZ_CAJZAL010000048.1 RefSeq gene 10682 11167 . + . ID=gene-LDO38_RS05135;Name=rfaE2;gbkey=Gene;gene=rfaE2;gene_biotype=protein_coding;locus_tag=LDO38_RS05135;old_locus_tag=BVI2075_1410008 NZ_CAJZAL010000048.1 Protein Homology CDS 10682 11167 . + 0 ID=cds-WP_011886156.1;Parent=gene-LDO38_RS05135;Dbxref=GenBank:WP_011886156.1;Name=WP_011886156.1;Ontology_term=GO:0005975,GO:0016773,GO:0016779;gbkey=CDS;gene=rfaE2;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353351.1;locus_tag=LDO38_RS05135;product=D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase;protein_id=WP_011886156.1;transl_table=11 NZ_CAJZAL010000048.1 RefSeq gene 11187 11429 . - . ID=gene-LDO38_RS05140;Name=LDO38_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05140;old_locus_tag=BVI2075_1410009 NZ_CAJZAL010000048.1 Protein Homology CDS 11187 11429 . - 0 ID=cds-WP_011886155.1;Parent=gene-LDO38_RS05140;Dbxref=GenBank:WP_011886155.1;Name=WP_011886155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546319.1;locus_tag=LDO38_RS05140;product=hypothetical protein;protein_id=WP_011886155.1;transl_table=11 NZ_CAJZAL010000048.1 RefSeq gene 11493 12281 . - . ID=gene-LDO38_RS05145;Name=LDO38_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05145;old_locus_tag=BVI2075_1410010 NZ_CAJZAL010000048.1 Protein Homology CDS 11493 12281 . - 0 ID=cds-WP_011886154.1;Parent=gene-LDO38_RS05145;Dbxref=GenBank:WP_011886154.1;Name=WP_011886154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407082.1;locus_tag=LDO38_RS05145;product=type III pantothenate kinase;protein_id=WP_011886154.1;transl_table=11 NZ_CAJZAL010000048.1 RefSeq gene 12278 13198 . - . ID=gene-LDO38_RS05150;Name=LDO38_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05150;old_locus_tag=BVI2075_1410011 NZ_CAJZAL010000048.1 Protein Homology CDS 12278 13198 . - 0 ID=cds-WP_011886153.1;Parent=gene-LDO38_RS05150;Dbxref=GenBank:WP_011886153.1;Name=WP_011886153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353348.1;locus_tag=LDO38_RS05150;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_011886153.1;transl_table=11 NZ_CAJZAL010000048.1 RefSeq pseudogene 13293 13476 . - . ID=gene-LDO38_RS05155;Name=LDO38_RS05155;end_range=13476,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS05155;old_locus_tag=BVI2075_1410013;partial=true;pseudo=true NZ_CAJZAL010000048.1 Protein Homology CDS 13293 13476 . - 1 ID=cds-LDO38_RS05155;Parent=gene-LDO38_RS05155;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=13476,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407079.1;locus_tag=LDO38_RS05155;partial=true;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000049.1 1 12824 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000049.1 RefSeq region 1 12824 . + . ID=NZ_CAJZAL010000049.1:1..12824;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_142 NZ_CAJZAL010000049.1 cmsearch riboswitch 52 313 . + . ID=id-NZ_CAJZAL010000049.1:52..313;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAL010000049.1 RefSeq gene 502 1560 . + . ID=gene-LDO38_RS05160;Name=LDO38_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05160;old_locus_tag=BVI2075_1420002 NZ_CAJZAL010000049.1 Protein Homology CDS 502 1560 . + 0 ID=cds-WP_011884826.1;Parent=gene-LDO38_RS05160;Dbxref=GenBank:WP_011884826.1;Name=WP_011884826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004266608.1;locus_tag=LDO38_RS05160;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_011884826.1;transl_table=11 NZ_CAJZAL010000049.1 RefSeq gene 1586 2674 . + . ID=gene-LDO38_RS05165;Name=cobW;gbkey=Gene;gene=cobW;gene_biotype=protein_coding;locus_tag=LDO38_RS05165;old_locus_tag=BVI2075_1420003 NZ_CAJZAL010000049.1 Protein Homology CDS 1586 2674 . + 0 ID=cds-WP_059622548.1;Parent=gene-LDO38_RS05165;Dbxref=GenBank:WP_059622548.1;Name=WP_059622548.1;Ontology_term=GO:0009236;gbkey=CDS;gene=cobW;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328470.1;locus_tag=LDO38_RS05165;product=cobalamin biosynthesis protein CobW;protein_id=WP_059622548.1;transl_table=11 NZ_CAJZAL010000049.1 RefSeq gene 2679 6491 . + . ID=gene-LDO38_RS05170;Name=cobN;gbkey=Gene;gene=cobN;gene_biotype=protein_coding;locus_tag=LDO38_RS05170;old_locus_tag=BVI2075_1420004 NZ_CAJZAL010000049.1 Protein Homology CDS 2679 6491 . + 0 ID=cds-WP_060082037.1;Parent=gene-LDO38_RS05170;Dbxref=GenBank:WP_060082037.1;Name=WP_060082037.1;Ontology_term=GO:0009236,GO:0051116;gbkey=CDS;gene=cobN;go_function=cobaltochelatase activity|0051116||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723027.1;locus_tag=LDO38_RS05170;product=cobaltochelatase subunit CobN;protein_id=WP_060082037.1;transl_table=11 NZ_CAJZAL010000049.1 RefSeq gene 6488 7576 . + . ID=gene-LDO38_RS05175;Name=LDO38_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05175;old_locus_tag=BVI2075_1420006 NZ_CAJZAL010000049.1 Protein Homology CDS 6488 7576 . + 0 ID=cds-WP_060122526.1;Parent=gene-LDO38_RS05175;Dbxref=GenBank:WP_060122526.1;Name=WP_060122526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404820.1;locus_tag=LDO38_RS05175;product=ATP-binding protein;protein_id=WP_060122526.1;transl_table=11 NZ_CAJZAL010000049.1 RefSeq gene 7645 8253 . + . ID=gene-LDO38_RS05180;Name=LDO38_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05180;old_locus_tag=BVI2075_1420005 NZ_CAJZAL010000049.1 Protein Homology CDS 7645 8253 . + 0 ID=cds-WP_059462572.1;Parent=gene-LDO38_RS05180;Dbxref=GenBank:WP_059462572.1;Name=WP_059462572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723029.1;locus_tag=LDO38_RS05180;product=vWA domain-containing protein;protein_id=WP_059462572.1;transl_table=11 NZ_CAJZAL010000049.1 RefSeq gene 8329 8781 . + . ID=gene-LDO38_RS05185;Name=LDO38_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05185;old_locus_tag=BVI2075_1420007 NZ_CAJZAL010000049.1 Protein Homology CDS 8329 8781 . + 0 ID=cds-WP_059461746.1;Parent=gene-LDO38_RS05185;Dbxref=GenBank:WP_059461746.1;Name=WP_059461746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897046.1;locus_tag=LDO38_RS05185;product=YaiI/YqxD family protein;protein_id=WP_059461746.1;transl_table=11 NZ_CAJZAL010000049.1 RefSeq gene 8862 9434 . + . ID=gene-LDO38_RS05190;Name=LDO38_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05190;old_locus_tag=BVI2075_1420008 NZ_CAJZAL010000049.1 Protein Homology CDS 8862 9434 . + 0 ID=cds-WP_034193128.1;Parent=gene-LDO38_RS05190;Dbxref=GenBank:WP_034193128.1;Name=WP_034193128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756007.1;locus_tag=LDO38_RS05190;product=DUF1993 domain-containing protein;protein_id=WP_034193128.1;transl_table=11 NZ_CAJZAL010000049.1 RefSeq gene 9498 11237 . - . ID=gene-LDO38_RS05195;Name=cobJ;gbkey=Gene;gene=cobJ;gene_biotype=protein_coding;locus_tag=LDO38_RS05195;old_locus_tag=BVI2075_1420009 NZ_CAJZAL010000049.1 Protein Homology CDS 9498 11237 . - 0 ID=cds-WP_059475815.1;Parent=gene-LDO38_RS05195;Dbxref=GenBank:WP_059475815.1;Name=WP_059475815.1;Ontology_term=GO:0009236,GO:0030789;gbkey=CDS;gene=cobJ;go_function=precorrin-3B C17-methyltransferase activity|0030789||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884840.1;locus_tag=LDO38_RS05195;product=precorrin-3B C(17)-methyltransferase;protein_id=WP_059475815.1;transl_table=11 NZ_CAJZAL010000049.1 RefSeq gene 11234 11968 . - . ID=gene-LDO38_RS05200;Name=LDO38_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05200;old_locus_tag=BVI2075_1420010 NZ_CAJZAL010000049.1 Protein Homology CDS 11234 11968 . - 0 ID=cds-WP_011884842.1;Parent=gene-LDO38_RS05200;Dbxref=GenBank:WP_011884842.1;Name=WP_011884842.1;Ontology_term=GO:0009236,GO:0030788;gbkey=CDS;go_function=precorrin-2 C20-methyltransferase activity|0030788||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601722.1;locus_tag=LDO38_RS05200;product=precorrin-2 C(20)-methyltransferase;protein_id=WP_011884842.1;transl_table=11 NZ_CAJZAL010000049.1 RefSeq gene 11965 12591 . - . ID=gene-LDO38_RS05205;Name=LDO38_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05205;old_locus_tag=BVI2075_1420011 NZ_CAJZAL010000049.1 Protein Homology CDS 11965 12591 . - 0 ID=cds-WP_059461748.1;Parent=gene-LDO38_RS05205;Dbxref=GenBank:WP_059461748.1;Name=WP_059461748.1;Ontology_term=GO:0009236,GO:0016993;gbkey=CDS;go_function=precorrin-8X methylmutase activity|0016993||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017778279.1;locus_tag=LDO38_RS05205;product=precorrin-8X methylmutase;protein_id=WP_059461748.1;transl_table=11 NZ_CAJZAL010000049.1 RefSeq pseudogene 12584 12824 . - . ID=gene-LDO38_RS05210;Name=LDO38_RS05210;end_range=12824,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS05210;old_locus_tag=BVI2075_1420012;partial=true;pseudo=true NZ_CAJZAL010000049.1 Protein Homology CDS 12584 12824 . - 1 ID=cds-LDO38_RS05210;Parent=gene-LDO38_RS05210;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=12824,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884845.1;locus_tag=LDO38_RS05210;partial=true;product=precorrin-3B synthase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000050.1 1 6541 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000050.1 RefSeq region 1 6541 . + . ID=NZ_CAJZAL010000050.1:1..6541;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_143 NZ_CAJZAL010000050.1 RefSeq gene 1 346 . - . ID=gene-LDO38_RS05215;Name=LDO38_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05215;partial=true;start_range=.,1 NZ_CAJZAL010000050.1 Protein Homology CDS 1 346 . - 0 ID=cds-WP_224056234.1;Parent=gene-LDO38_RS05215;Dbxref=GenBank:WP_224056234.1;Name=WP_224056234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522660.1;locus_tag=LDO38_RS05215;partial=true;product=PfkB family carbohydrate kinase;protein_id=WP_224056234.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000050.1 RefSeq gene 419 1195 . - . ID=gene-LDO38_RS05220;Name=LDO38_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05220;old_locus_tag=BVI2075_1430002 NZ_CAJZAL010000050.1 Protein Homology CDS 419 1195 . - 0 ID=cds-WP_011885879.1;Parent=gene-LDO38_RS05220;Dbxref=GenBank:WP_011885879.1;Name=WP_011885879.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876870.1;locus_tag=LDO38_RS05220;product=L-iditol 2-dehydrogenase;protein_id=WP_011885879.1;transl_table=11 NZ_CAJZAL010000050.1 RefSeq gene 1523 1984 . + . ID=gene-LDO38_RS05225;Name=LDO38_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05225;old_locus_tag=BVI2075_1430004 NZ_CAJZAL010000050.1 Protein Homology CDS 1523 1984 . + 0 ID=cds-WP_011885880.1;Parent=gene-LDO38_RS05225;Dbxref=GenBank:WP_011885880.1;Name=WP_011885880.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896195.1;locus_tag=LDO38_RS05225;product=Fur family transcriptional regulator;protein_id=WP_011885880.1;transl_table=11 NZ_CAJZAL010000050.1 RefSeq gene 2033 2947 . + . ID=gene-LDO38_RS05230;Name=LDO38_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05230;old_locus_tag=BVI2075_1430005 NZ_CAJZAL010000050.1 Protein Homology CDS 2033 2947 . + 0 ID=cds-WP_011885881.1;Parent=gene-LDO38_RS05230;Dbxref=GenBank:WP_011885881.1;Name=WP_011885881.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754783.1;locus_tag=LDO38_RS05230;product=metal ABC transporter solute-binding protein%2C Zn/Mn family;protein_id=WP_011885881.1;transl_table=11 NZ_CAJZAL010000050.1 RefSeq gene 2961 3848 . + . ID=gene-LDO38_RS05235;Name=LDO38_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05235;old_locus_tag=BVI2075_1430006 NZ_CAJZAL010000050.1 Protein Homology CDS 2961 3848 . + 0 ID=cds-WP_014723550.1;Parent=gene-LDO38_RS05235;Dbxref=GenBank:WP_014723550.1;Name=WP_014723550.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410050.1;locus_tag=LDO38_RS05235;product=ABC transporter ATP-binding protein;protein_id=WP_014723550.1;transl_table=11 NZ_CAJZAL010000050.1 RefSeq gene 3841 4623 . + . ID=gene-LDO38_RS05240;Name=LDO38_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05240;old_locus_tag=BVI2075_1430007 NZ_CAJZAL010000050.1 Protein Homology CDS 3841 4623 . + 0 ID=cds-WP_014723551.1;Parent=gene-LDO38_RS05240;Dbxref=GenBank:WP_014723551.1;Name=WP_014723551.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329133.1;locus_tag=LDO38_RS05240;product=metal ABC transporter permease;protein_id=WP_014723551.1;transl_table=11 NZ_CAJZAL010000050.1 RefSeq gene 4741 5589 . - . ID=gene-LDO38_RS05245;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=LDO38_RS05245;old_locus_tag=BVI2075_1430008 NZ_CAJZAL010000050.1 Protein Homology CDS 4741 5589 . - 0 ID=cds-WP_069246308.1;Parent=gene-LDO38_RS05245;Dbxref=GenBank:WP_069246308.1;Name=WP_069246308.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723552.1;locus_tag=LDO38_RS05245;product=S-formylglutathione hydrolase;protein_id=WP_069246308.1;transl_table=11 NZ_CAJZAL010000050.1 RefSeq gene 5882 6395 . - . ID=gene-LDO38_RS05250;Name=LDO38_RS05250;end_range=6395,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05250;old_locus_tag=BVI2075_1430009;partial=true NZ_CAJZAL010000050.1 Protein Homology CDS 5882 6395 . - 1 ID=cds-WP_435520901.1;Parent=gene-LDO38_RS05250;Dbxref=GenBank:WP_435520901.1;Name=WP_435520901.1;Ontology_term=GO:0005975,GO:0016301;end_range=6395,.;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546089.1;locus_tag=LDO38_RS05250;partial=true;product=FGGY-family carbohydrate kinase;protein_id=WP_435520901.1;transl_table=11 ##sequence-region NZ_CAJZAL010000051.1 1 16310 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000051.1 RefSeq region 1 16310 . + . ID=NZ_CAJZAL010000051.1:1..16310;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_144 NZ_CAJZAL010000051.1 RefSeq gene 109 1326 . - . ID=gene-LDO38_RS05255;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=LDO38_RS05255;old_locus_tag=BVI2075_1440001 NZ_CAJZAL010000051.1 Protein Homology CDS 109 1326 . - 0 ID=cds-WP_014725293.1;Parent=gene-LDO38_RS05255;Dbxref=GenBank:WP_014725293.1;Name=WP_014725293.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477248.1;locus_tag=LDO38_RS05255;product=type II secretion system inner membrane protein GspF;protein_id=WP_014725293.1;transl_table=11 NZ_CAJZAL010000051.1 RefSeq gene 1979 3313 . + . ID=gene-LDO38_RS05260;Name=LDO38_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05260;old_locus_tag=BVI2075_1440002 NZ_CAJZAL010000051.1 Protein Homology CDS 1979 3313 . + 0 ID=cds-WP_045577856.1;Parent=gene-LDO38_RS05260;Dbxref=GenBank:WP_045577856.1;Name=WP_045577856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725294.1;locus_tag=LDO38_RS05260;product=substrate-binding domain-containing protein;protein_id=WP_045577856.1;transl_table=11 NZ_CAJZAL010000051.1 RefSeq gene 3700 16310 . - . ID=gene-LDO38_RS05265;Name=LDO38_RS05265;end_range=16310,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05265;old_locus_tag=BVI2075_1440004;partial=true NZ_CAJZAL010000051.1 Protein Homology CDS 3700 16310 . - 2 ID=cds-WP_224056235.1;Parent=gene-LDO38_RS05265;Dbxref=GenBank:WP_224056235.1;Name=WP_224056235.1;end_range=16310,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882523.1;locus_tag=LDO38_RS05265;partial=true;product=filamentous haemagglutinin family protein;protein_id=WP_224056235.1;transl_table=11 ##sequence-region NZ_CAJZAL010000052.1 1 7461 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000052.1 RefSeq region 1 7461 . + . ID=NZ_CAJZAL010000052.1:1..7461;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_145 NZ_CAJZAL010000052.1 RefSeq gene 1 654 . + . ID=gene-LDO38_RS05270;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=LDO38_RS05270;old_locus_tag=BVI2075_1450001;partial=true;start_range=.,1 NZ_CAJZAL010000052.1 Protein Homology CDS 1 654 . + 0 ID=cds-WP_224056236.1;Parent=gene-LDO38_RS05270;Dbxref=GenBank:WP_224056236.1;Name=WP_224056236.1;Ontology_term=GO:0033214,GO:0008199,GO:0016491,GO:0051537;gbkey=CDS;gene=fhuF;go_function=ferric iron binding|0008199||IEA,oxidoreductase activity|0016491||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=siderophore-iron import into cell|0033214||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404841.1;locus_tag=LDO38_RS05270;partial=true;product=siderophore-iron reductase FhuF;protein_id=WP_224056236.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000052.1 RefSeq gene 654 1706 . + . ID=gene-LDO38_RS05275;Name=LDO38_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05275;old_locus_tag=BVI2075_1450002 NZ_CAJZAL010000052.1 Protein Homology CDS 654 1706 . + 0 ID=cds-WP_059740869.1;Parent=gene-LDO38_RS05275;Dbxref=GenBank:WP_059740869.1;Name=WP_059740869.1;Ontology_term=GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723010.1;locus_tag=LDO38_RS05275;product=ABC transporter substrate-binding protein;protein_id=WP_059740869.1;transl_table=11 NZ_CAJZAL010000052.1 RefSeq gene 2104 3843 . - . ID=gene-LDO38_RS05280;Name=LDO38_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05280;old_locus_tag=BVI2075_1450005 NZ_CAJZAL010000052.1 Protein Homology CDS 2104 3843 . - 0 ID=cds-WP_224056237.1;Parent=gene-LDO38_RS05280;Dbxref=GenBank:WP_224056237.1;Name=WP_224056237.1;Ontology_term=GO:0015833,GO:0005524,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351939.1;locus_tag=LDO38_RS05280;product=cyclic peptide export ABC transporter;protein_id=WP_224056237.1;transl_table=11 NZ_CAJZAL010000052.1 RefSeq gene 4156 5700 . + . ID=gene-LDO38_RS30355;Name=LDO38_RS30355;end_range=5700,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30355;old_locus_tag=BVI2075_1450006;partial=true NZ_CAJZAL010000052.1 Protein Homology CDS 4156 5700 . + 0 ID=cds-WP_435520902.1;Parent=gene-LDO38_RS30355;Dbxref=GenBank:WP_435520902.1;Name=WP_435520902.1;end_range=5700,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004536430.1;locus_tag=LDO38_RS30355;partial=true;product=amino acid adenylation domain-containing protein;protein_id=WP_435520902.1;transl_table=11 NZ_CAJZAL010000052.1 RefSeq gene 5711 7325 . + . ID=gene-LDO38_RS30360;Name=LDO38_RS30360;end_range=7325,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30360;old_locus_tag=BVI2075_1450007;partial=true;start_range=.,5711 NZ_CAJZAL010000052.1 Protein Homology CDS 5711 7325 . + 0 ID=cds-WP_435520903.1;Parent=gene-LDO38_RS30360;Dbxref=GenBank:WP_435520903.1;Name=WP_435520903.1;Ontology_term=GO:0003824;end_range=7325,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400101.1;locus_tag=LDO38_RS30360;partial=true;product=condensation domain-containing protein;protein_id=WP_435520903.1;start_range=.,5711;transl_table=11 ##sequence-region NZ_CAJZAL010000053.1 1 8809 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000053.1 RefSeq region 1 8809 . + . ID=NZ_CAJZAL010000053.1:1..8809;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_146 NZ_CAJZAL010000053.1 RefSeq gene 1 1324 . + . ID=gene-LDO38_RS05290;Name=flhF;gbkey=Gene;gene=flhF;gene_biotype=protein_coding;locus_tag=LDO38_RS05290;old_locus_tag=BVI2075_1460001;partial=true;start_range=.,1 NZ_CAJZAL010000053.1 Protein Homology CDS 1 1324 . + 1 ID=cds-WP_224056238.1;Parent=gene-LDO38_RS05290;Dbxref=GenBank:WP_224056238.1;Name=WP_224056238.1;Ontology_term=GO:0044781,GO:0003924,GO:0005525;gbkey=CDS;gene=flhF;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882919.1;locus_tag=LDO38_RS05290;partial=true;product=flagellar biosynthesis protein FlhF;protein_id=WP_224056238.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000053.1 RefSeq gene 1317 2135 . + . ID=gene-LDO38_RS05295;Name=LDO38_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05295;old_locus_tag=BVI2075_1460002 NZ_CAJZAL010000053.1 Protein Homology CDS 1317 2135 . + 0 ID=cds-WP_059474542.1;Parent=gene-LDO38_RS05295;Dbxref=GenBank:WP_059474542.1;Name=WP_059474542.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198637.1;locus_tag=LDO38_RS05295;product=MinD/ParA family ATP-binding protein;protein_id=WP_059474542.1;transl_table=11 NZ_CAJZAL010000053.1 RefSeq gene 2158 2892 . + . ID=gene-LDO38_RS05300;Name=LDO38_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05300;old_locus_tag=BVI2075_1460003 NZ_CAJZAL010000053.1 Protein Homology CDS 2158 2892 . + 0 ID=cds-WP_011882921.1;Parent=gene-LDO38_RS05300;Dbxref=GenBank:WP_011882921.1;Name=WP_011882921.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023809.1;locus_tag=LDO38_RS05300;product=RNA polymerase sigma factor FliA;protein_id=WP_011882921.1;transl_table=11 NZ_CAJZAL010000053.1 cmsearch riboswitch 2987 3102 . + . ID=id-NZ_CAJZAL010000053.1:2987..3102;Dbxref=RFAM:RF01057;Note=S-adenosyl-L-homocysteine riboswitch;bound_moiety=S-adenosyl-L-homocysteine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAL010000053.1 RefSeq gene 3137 4555 . + . ID=gene-LDO38_RS05305;Name=ahcY;gbkey=Gene;gene=ahcY;gene_biotype=protein_coding;locus_tag=LDO38_RS05305;old_locus_tag=BVI2075_1460005 NZ_CAJZAL010000053.1 Protein Homology CDS 3137 4555 . + 0 ID=cds-WP_011882922.1;Parent=gene-LDO38_RS05305;Dbxref=GenBank:WP_011882922.1;Name=WP_011882922.1;Ontology_term=GO:0006730,GO:0004013;gbkey=CDS;gene=ahcY;go_function=adenosylhomocysteinase activity|0004013||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401380.1;locus_tag=LDO38_RS05305;product=adenosylhomocysteinase;protein_id=WP_011882922.1;transl_table=11 NZ_CAJZAL010000053.1 RefSeq gene 4723 5076 . + . ID=gene-LDO38_RS05310;Name=LDO38_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05310;old_locus_tag=BVI2075_1460006 NZ_CAJZAL010000053.1 Protein Homology CDS 4723 5076 . + 0 ID=cds-WP_011882923.1;Parent=gene-LDO38_RS05310;Dbxref=GenBank:WP_011882923.1;Name=WP_011882923.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906537.1;locus_tag=LDO38_RS05310;product=phage holin family protein;protein_id=WP_011882923.1;transl_table=11 NZ_CAJZAL010000053.1 RefSeq gene 5101 5931 . + . ID=gene-LDO38_RS05315;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=LDO38_RS05315;old_locus_tag=BVI2075_1460007 NZ_CAJZAL010000053.1 Protein Homology CDS 5101 5931 . + 0 ID=cds-WP_011882924.1;Parent=gene-LDO38_RS05315;Dbxref=GenBank:WP_011882924.1;Name=WP_011882924.1;Ontology_term=GO:0009086,GO:0004489,GO:0005829;gbkey=CDS;gene=metF;go_component=cytosol|0005829||IEA;go_function=methylenetetrahydrofolate reductase [NAD(P)H] activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484036.1;locus_tag=LDO38_RS05315;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=WP_011882924.1;transl_table=11 NZ_CAJZAL010000053.1 RefSeq gene 6028 7506 . - . ID=gene-LDO38_RS05320;Name=LDO38_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05320;old_locus_tag=BVI2075_1460008 NZ_CAJZAL010000053.1 Protein Homology CDS 6028 7506 . - 0 ID=cds-WP_059462325.1;Parent=gene-LDO38_RS05320;Dbxref=GenBank:WP_059462325.1;Name=WP_059462325.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895580.1;locus_tag=LDO38_RS05320;product=amidase;protein_id=WP_059462325.1;transl_table=11 NZ_CAJZAL010000053.1 RefSeq gene 7585 8277 . - . ID=gene-LDO38_RS05325;Name=LDO38_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05325;old_locus_tag=BVI2075_1460009 NZ_CAJZAL010000053.1 Protein Homology CDS 7585 8277 . - 0 ID=cds-WP_011882926.1;Parent=gene-LDO38_RS05325;Dbxref=GenBank:WP_011882926.1;Name=WP_011882926.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009974414.1;locus_tag=LDO38_RS05325;product=dienelactone hydrolase family protein;protein_id=WP_011882926.1;transl_table=11 NZ_CAJZAL010000053.1 RefSeq gene 8568 8809 . + . ID=gene-LDO38_RS05330;Name=LDO38_RS05330;end_range=8809,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05330;partial=true NZ_CAJZAL010000053.1 Protein Homology CDS 8568 8809 . + 0 ID=cds-WP_224056239.1;Parent=gene-LDO38_RS05330;Dbxref=GenBank:WP_224056239.1;Name=WP_224056239.1;Ontology_term=GO:0018580;end_range=8809,.;gbkey=CDS;go_function=nitronate monooxygenase activity|0018580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417325.1;locus_tag=LDO38_RS05330;partial=true;product=nitronate monooxygenase;protein_id=WP_224056239.1;transl_table=11 ##sequence-region NZ_CAJZAL010000054.1 1 6405 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000054.1 RefSeq region 1 6405 . + . ID=NZ_CAJZAL010000054.1:1..6405;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_147 NZ_CAJZAL010000054.1 RefSeq pseudogene 1 306 . + . ID=gene-LDO38_RS05335;Name=LDO38_RS05335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS05335;old_locus_tag=BVI2075_1470001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000054.1 Protein Homology CDS 1 306 . + 0 ID=cds-LDO38_RS05335;Parent=gene-LDO38_RS05335;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362948.1;locus_tag=LDO38_RS05335;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000054.1 RefSeq gene 485 4904 . + . ID=gene-LDO38_RS05340;Name=LDO38_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05340;old_locus_tag=BVI2075_1470003;partial=true;start_range=.,485 NZ_CAJZAL010000054.1 Protein Homology CDS 485 4904 . + 1 ID=cds-WP_435520904.1;Parent=gene-LDO38_RS05340;Dbxref=GenBank:WP_435520904.1;Name=WP_435520904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480522.1;locus_tag=LDO38_RS05340;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_435520904.1;start_range=.,485;transl_table=11 NZ_CAJZAL010000054.1 RefSeq gene 4901 5326 . + . ID=gene-LDO38_RS05345;Name=LDO38_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05345;old_locus_tag=BVI2075_1470004 NZ_CAJZAL010000054.1 Protein Homology CDS 4901 5326 . + 0 ID=cds-WP_059460809.1;Parent=gene-LDO38_RS05345;Dbxref=GenBank:WP_059460809.1;Name=WP_059460809.1;Ontology_term=GO:0042546;gbkey=CDS;go_process=cell wall biogenesis|0042546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697675.1;locus_tag=LDO38_RS05345;product=SMI1/KNR4 family protein;protein_id=WP_059460809.1;transl_table=11 NZ_CAJZAL010000054.1 RefSeq pseudogene 5322 5867 . + . ID=gene-LDO38_RS05350;Name=LDO38_RS05350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS05350;partial=true;pseudo=true;start_range=.,5322 NZ_CAJZAL010000054.1 Protein Homology CDS 5322 5867 . + 0 ID=cds-LDO38_RS05350;Parent=gene-LDO38_RS05350;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883096.1;locus_tag=LDO38_RS05350;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,5322;transl_table=11 NZ_CAJZAL010000054.1 RefSeq gene 5867 6196 . + . ID=gene-LDO38_RS05355;Name=LDO38_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05355;old_locus_tag=BVI2075_1470006 NZ_CAJZAL010000054.1 Protein Homology CDS 5867 6196 . + 0 ID=cds-WP_011883097.1;Parent=gene-LDO38_RS05355;Dbxref=GenBank:WP_011883097.1;Name=WP_011883097.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049362.1;locus_tag=LDO38_RS05355;product=DUF7716 domain-containing protein;protein_id=WP_011883097.1;transl_table=11 NZ_CAJZAL010000054.1 RefSeq pseudogene 6236 6301 . + . ID=gene-LDO38_RS30365;Name=LDO38_RS30365;end_range=6301,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30365;partial=true;pseudo=true;start_range=.,6236 NZ_CAJZAL010000054.1 Protein Homology CDS 6236 6301 . + 0 ID=cds-LDO38_RS30365;Parent=gene-LDO38_RS30365;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=6301,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212597.1;locus_tag=LDO38_RS30365;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,6236;transl_table=11 ##sequence-region NZ_CAJZAL010000055.1 1 1317 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000055.1 RefSeq region 1 1317 . + . ID=NZ_CAJZAL010000055.1:1..1317;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_148 NZ_CAJZAL010000055.1 RefSeq pseudogene 1 199 . - . ID=gene-LDO38_RS05365;Name=LDO38_RS05365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS05365;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000055.1 Protein Homology CDS 1 199 . - 0 ID=cds-LDO38_RS05365;Parent=gene-LDO38_RS05365;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880799.1;locus_tag=LDO38_RS05365;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000055.1 RefSeq pseudogene 224 374 . + . ID=gene-LDO38_RS30370;Name=LDO38_RS30370;end_range=374,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30370;partial=true;pseudo=true NZ_CAJZAL010000055.1 Protein Homology CDS 224 374 . + 0 ID=cds-LDO38_RS30370;Parent=gene-LDO38_RS30370;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=374,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547066.1;locus_tag=LDO38_RS30370;partial=true;product=XRE family transcriptional regulator;pseudo=true;transl_table=11 NZ_CAJZAL010000055.1 RefSeq gene 624 1094 . - . ID=gene-LDO38_RS30375;Name=LDO38_RS30375;end_range=1094,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30375;partial=true NZ_CAJZAL010000055.1 GeneMarkS-2+ CDS 624 1094 . - 0 ID=cds-WP_435520905.1;Parent=gene-LDO38_RS30375;Dbxref=GenBank:WP_435520905.1;Name=WP_435520905.1;end_range=1094,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30375;partial=true;product=hypothetical protein;protein_id=WP_435520905.1;transl_table=11 NZ_CAJZAL010000055.1 RefSeq pseudogene 1105 1317 . + . ID=gene-LDO38_RS05375;Name=LDO38_RS05375;end_range=1317,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS05375;partial=true;pseudo=true;start_range=.,1105 NZ_CAJZAL010000055.1 Protein Homology CDS 1105 1317 . + 1 ID=cds-LDO38_RS05375;Parent=gene-LDO38_RS05375;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1317,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009898848.1;locus_tag=LDO38_RS05375;partial=true;product=Xaa-Pro dipeptidyl-peptidase;pseudo=true;start_range=.,1105;transl_table=11 ##sequence-region NZ_CAJZAL010000056.1 1 4304 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000056.1 RefSeq region 1 4304 . + . ID=NZ_CAJZAL010000056.1:1..4304;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_149 NZ_CAJZAL010000056.1 RefSeq gene 1 573 . + . ID=gene-LDO38_RS05380;Name=LDO38_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05380;old_locus_tag=BVI2075_1490001;partial=true;start_range=.,1 NZ_CAJZAL010000056.1 Protein Homology CDS 1 573 . + 0 ID=cds-WP_224056242.1;Parent=gene-LDO38_RS05380;Dbxref=GenBank:WP_224056242.1;Name=WP_224056242.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545414.1;locus_tag=LDO38_RS05380;partial=true;product=MFS transporter;protein_id=WP_224056242.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000056.1 RefSeq gene 651 1511 . - . ID=gene-LDO38_RS05385;Name=LDO38_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05385;old_locus_tag=BVI2075_1490002 NZ_CAJZAL010000056.1 Protein Homology CDS 651 1511 . - 0 ID=cds-WP_014723038.1;Parent=gene-LDO38_RS05385;Dbxref=GenBank:WP_014723038.1;Name=WP_014723038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884861.1;locus_tag=LDO38_RS05385;product=hypothetical protein;protein_id=WP_014723038.1;transl_table=11 NZ_CAJZAL010000056.1 RefSeq gene 1573 2301 . - . ID=gene-LDO38_RS05390;Name=cobM;gbkey=Gene;gene=cobM;gene_biotype=protein_coding;locus_tag=LDO38_RS05390;old_locus_tag=BVI2075_1490003 NZ_CAJZAL010000056.1 Protein Homology CDS 1573 2301 . - 0 ID=cds-WP_034193131.1;Parent=gene-LDO38_RS05390;Dbxref=GenBank:WP_034193131.1;Name=WP_034193131.1;Ontology_term=GO:0009236,GO:0046026;gbkey=CDS;gene=cobM;go_function=precorrin-4 C11-methyltransferase activity|0046026||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213333.1;locus_tag=LDO38_RS05390;product=precorrin-4 C(11)-methyltransferase;protein_id=WP_034193131.1;transl_table=11 NZ_CAJZAL010000056.1 RefSeq gene 2342 3073 . - . ID=gene-LDO38_RS05395;Name=LDO38_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05395;old_locus_tag=BVI2075_1490004 NZ_CAJZAL010000056.1 Protein Homology CDS 2342 3073 . - 0 ID=cds-WP_124259890.1;Parent=gene-LDO38_RS05395;Dbxref=GenBank:WP_124259890.1;Name=WP_124259890.1;Ontology_term=GO:0009236,GO:0016994;gbkey=CDS;go_function=precorrin-6A reductase activity|0016994||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400061.1;locus_tag=LDO38_RS05395;product=cobalt-precorrin-6A reductase;protein_id=WP_124259890.1;transl_table=11 NZ_CAJZAL010000056.1 RefSeq gene 3070 4158 . - . ID=gene-LDO38_RS05400;Name=LDO38_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05400;old_locus_tag=BVI2075_1490005 NZ_CAJZAL010000056.1 Protein Homology CDS 3070 4158 . - 0 ID=cds-WP_011884849.1;Parent=gene-LDO38_RS05400;Dbxref=GenBank:WP_011884849.1;Name=WP_011884849.1;Ontology_term=GO:0009236,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413271.1;locus_tag=LDO38_RS05400;product=cobalt-precorrin-5B (C(1))-methyltransferase;protein_id=WP_011884849.1;transl_table=11 NZ_CAJZAL010000056.1 RefSeq pseudogene 4158 4304 . - . ID=gene-LDO38_RS05405;Name=LDO38_RS05405;end_range=4304,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS05405;old_locus_tag=BVI2075_1490006;partial=true;pseudo=true NZ_CAJZAL010000056.1 Protein Homology CDS 4158 4304 . - 0 ID=cds-LDO38_RS05405;Parent=gene-LDO38_RS05405;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4304,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213336.1;locus_tag=LDO38_RS05405;partial=true;product=bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000057.1 1 69032 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000057.1 RefSeq region 1 69032 . + . ID=NZ_CAJZAL010000057.1:1..69032;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_15 NZ_CAJZAL010000057.1 RefSeq gene 652 774 . - . ID=gene-LDO38_RS05410;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=LDO38_RS05410;old_locus_tag=BVI2075_150003 NZ_CAJZAL010000057.1 Protein Homology CDS 652 774 . - 0 ID=cds-WP_014723679.1;Parent=gene-LDO38_RS05410;Dbxref=GenBank:WP_014723679.1;Name=WP_014723679.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895987.1;locus_tag=LDO38_RS05410;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_014723679.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 829 1965 . - . ID=gene-LDO38_RS05415;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=LDO38_RS05415;old_locus_tag=BVI2075_150004 NZ_CAJZAL010000057.1 Protein Homology CDS 829 1965 . - 0 ID=cds-WP_011886081.1;Parent=gene-LDO38_RS05415;Dbxref=GenBank:WP_011886081.1;Name=WP_011886081.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010101549.1;locus_tag=LDO38_RS05415;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_011886081.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 1997 3577 . - . ID=gene-LDO38_RS05420;Name=LDO38_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05420;old_locus_tag=BVI2075_150005 NZ_CAJZAL010000057.1 Protein Homology CDS 1997 3577 . - 0 ID=cds-WP_011886080.1;Parent=gene-LDO38_RS05420;Dbxref=GenBank:WP_011886080.1;Name=WP_011886080.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546257.1;locus_tag=LDO38_RS05420;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_011886080.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 3567 3845 . - . ID=gene-LDO38_RS05425;Name=cydP;gbkey=Gene;gene=cydP;gene_biotype=protein_coding;locus_tag=LDO38_RS05425;old_locus_tag=BVI2075_150006 NZ_CAJZAL010000057.1 Protein Homology CDS 3567 3845 . - 0 ID=cds-WP_011886079.1;Parent=gene-LDO38_RS05425;Dbxref=GenBank:WP_011886079.1;Name=WP_011886079.1;gbkey=CDS;gene=cydP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414477.1;locus_tag=LDO38_RS05425;product=cytochrome oxidase putative small subunit CydP;protein_id=WP_011886079.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 4184 5119 . - . ID=gene-LDO38_RS05430;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=LDO38_RS05430;old_locus_tag=BVI2075_150007 NZ_CAJZAL010000057.1 Protein Homology CDS 4184 5119 . - 0 ID=cds-WP_014723678.1;Parent=gene-LDO38_RS05430;Dbxref=GenBank:WP_014723678.1;Name=WP_014723678.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893111.1;locus_tag=LDO38_RS05430;product=RNA polymerase sigma factor RpoH;protein_id=WP_014723678.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 5480 6049 . + . ID=gene-LDO38_RS05435;Name=LDO38_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05435;old_locus_tag=BVI2075_150010 NZ_CAJZAL010000057.1 Protein Homology CDS 5480 6049 . + 0 ID=cds-WP_011886077.1;Parent=gene-LDO38_RS05435;Dbxref=GenBank:WP_011886077.1;Name=WP_011886077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483740.1;locus_tag=LDO38_RS05435;product=acyloxyacyl hydrolase;protein_id=WP_011886077.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 6095 6478 . + . ID=gene-LDO38_RS05440;Name=LDO38_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05440;old_locus_tag=BVI2075_150011 NZ_CAJZAL010000057.1 Protein Homology CDS 6095 6478 . + 0 ID=cds-WP_011886076.1;Parent=gene-LDO38_RS05440;Dbxref=GenBank:WP_011886076.1;Name=WP_011886076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723676.1;locus_tag=LDO38_RS05440;product=nuclear transport factor 2 family protein;protein_id=WP_011886076.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 6619 8265 . - . ID=gene-LDO38_RS05445;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=LDO38_RS05445;old_locus_tag=BVI2075_150013 NZ_CAJZAL010000057.1 Protein Homology CDS 6619 8265 . - 0 ID=cds-WP_045578766.1;Parent=gene-LDO38_RS05445;Dbxref=GenBank:WP_045578766.1;Name=WP_045578766.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254946.1;locus_tag=LDO38_RS05445;product=2-isopropylmalate synthase;protein_id=WP_045578766.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 8714 9691 . - . ID=gene-LDO38_RS05450;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=LDO38_RS05450;old_locus_tag=BVI2075_150014 NZ_CAJZAL010000057.1 Protein Homology CDS 8714 9691 . - 0 ID=cds-WP_011886074.1;Parent=gene-LDO38_RS05450;Dbxref=GenBank:WP_011886074.1;Name=WP_011886074.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886074.1;locus_tag=LDO38_RS05450;product=DNA-binding protein YbiB;protein_id=WP_011886074.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 9862 10506 . + . ID=gene-LDO38_RS05455;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=LDO38_RS05455;old_locus_tag=BVI2075_150015 NZ_CAJZAL010000057.1 Protein Homology CDS 9862 10506 . + 0 ID=cds-WP_011886073.1;Parent=gene-LDO38_RS05455;Dbxref=GenBank:WP_011886073.1;Name=WP_011886073.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034,GO:0005737;gbkey=CDS;gene=maiA;go_component=cytoplasm|0005737||IEA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,L-tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009902749.1;locus_tag=LDO38_RS05455;product=maleylacetoacetate isomerase;protein_id=WP_011886073.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 10591 11724 . - . ID=gene-LDO38_RS05460;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=LDO38_RS05460;old_locus_tag=BVI2075_150016 NZ_CAJZAL010000057.1 Protein Homology CDS 10591 11724 . - 0 ID=cds-WP_011886072.1;Parent=gene-LDO38_RS05460;Dbxref=GenBank:WP_011886072.1;Name=WP_011886072.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195253.1;locus_tag=LDO38_RS05460;product=signal recognition particle-docking protein FtsY;protein_id=WP_011886072.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 11926 12540 . + . ID=gene-LDO38_RS05465;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=LDO38_RS05465;old_locus_tag=BVI2075_150017 NZ_CAJZAL010000057.1 Protein Homology CDS 11926 12540 . + 0 ID=cds-WP_011886071.1;Parent=gene-LDO38_RS05465;Dbxref=GenBank:WP_011886071.1;Name=WP_011886071.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601291.1;locus_tag=LDO38_RS05465;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_011886071.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 12652 13149 . + . ID=gene-LDO38_RS05470;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=LDO38_RS05470;old_locus_tag=BVI2075_150018 NZ_CAJZAL010000057.1 Protein Homology CDS 12652 13149 . + 0 ID=cds-WP_006398238.1;Parent=gene-LDO38_RS05470;Dbxref=GenBank:WP_006398238.1;Name=WP_006398238.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195249.1;locus_tag=LDO38_RS05470;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_006398238.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 13209 13475 . + . ID=gene-LDO38_RS05475;Name=LDO38_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05475;old_locus_tag=BVI2075_150019 NZ_CAJZAL010000057.1 Protein Homology CDS 13209 13475 . + 0 ID=cds-WP_011886070.1;Parent=gene-LDO38_RS05475;Dbxref=GenBank:WP_011886070.1;Name=WP_011886070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886070.1;locus_tag=LDO38_RS05475;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_011886070.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 13546 14613 . - . ID=gene-LDO38_RS05480;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=LDO38_RS05480;old_locus_tag=BVI2075_150020 NZ_CAJZAL010000057.1 Protein Homology CDS 13546 14613 . - 0 ID=cds-WP_069246330.1;Parent=gene-LDO38_RS05480;Dbxref=GenBank:WP_069246330.1;Name=WP_069246330.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212697.1;locus_tag=LDO38_RS05480;product=histidinol-phosphate transaminase;protein_id=WP_069246330.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 14748 15347 . - . ID=gene-LDO38_RS05485;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=LDO38_RS05485;old_locus_tag=BVI2075_150021 NZ_CAJZAL010000057.1 Protein Homology CDS 14748 15347 . - 0 ID=cds-WP_045578768.1;Parent=gene-LDO38_RS05485;Dbxref=GenBank:WP_045578768.1;Name=WP_045578768.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753283.1;locus_tag=LDO38_RS05485;product=aminoacyl-tRNA hydrolase;protein_id=WP_045578768.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 15465 16070 . - . ID=gene-LDO38_RS05490;Name=LDO38_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05490;old_locus_tag=BVI2075_150022 NZ_CAJZAL010000057.1 Protein Homology CDS 15465 16070 . - 0 ID=cds-WP_011886067.1;Parent=gene-LDO38_RS05490;Dbxref=GenBank:WP_011886067.1;Name=WP_011886067.1;Ontology_term=GO:0006412,GO:0003735,GO:0008097;gbkey=CDS;go_function=structural constituent of ribosome|0003735||IEA,5S rRNA binding|0008097||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353236.1;locus_tag=LDO38_RS05490;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_011886067.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 16232 17194 . - . ID=gene-LDO38_RS05495;Name=LDO38_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05495;old_locus_tag=BVI2075_150023 NZ_CAJZAL010000057.1 Protein Homology CDS 16232 17194 . - 0 ID=cds-WP_011886066.1;Parent=gene-LDO38_RS05495;Dbxref=GenBank:WP_011886066.1;Name=WP_011886066.1;Ontology_term=GO:0006015,GO:0009156,GO:0009165,GO:0016310,GO:0000287,GO:0004749,GO:0005524,GO:0016301,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,ribose phosphate diphosphokinase activity|0004749||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA,ribonucleoside monophosphate biosynthetic process|0009156||IEA,nucleotide biosynthetic process|0009165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753281.1;locus_tag=LDO38_RS05495;product=ribose-phosphate pyrophosphokinase;protein_id=WP_011886066.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 17239 17315 . - . ID=gene-LDO38_RS05500;Name=LDO38_RS05500;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS05500;old_locus_tag=BVI2075_TRNA43 NZ_CAJZAL010000057.1 tRNAscan-SE tRNA 17239 17315 . - . ID=rna-LDO38_RS05500;Parent=gene-LDO38_RS05500;anticodon=(pos:complement(17279..17281));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS05500;product=tRNA-Gln NZ_CAJZAL010000057.1 tRNAscan-SE exon 17239 17315 . - . ID=exon-LDO38_RS05500-1;Parent=rna-LDO38_RS05500;anticodon=(pos:complement(17279..17281));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS05500;product=tRNA-Gln NZ_CAJZAL010000057.1 RefSeq gene 17369 18250 . - . ID=gene-LDO38_RS05505;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=LDO38_RS05505;old_locus_tag=BVI2075_150024 NZ_CAJZAL010000057.1 Protein Homology CDS 17369 18250 . - 0 ID=cds-WP_059475371.1;Parent=gene-LDO38_RS05505;Dbxref=GenBank:WP_059475371.1;Name=WP_059475371.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600162.1;locus_tag=LDO38_RS05505;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_059475371.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 18278 18898 . - . ID=gene-LDO38_RS05510;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=LDO38_RS05510;old_locus_tag=BVI2075_150025 NZ_CAJZAL010000057.1 Protein Homology CDS 18278 18898 . - 0 ID=cds-WP_011886064.1;Parent=gene-LDO38_RS05510;Dbxref=GenBank:WP_011886064.1;Name=WP_011886064.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415468.1;locus_tag=LDO38_RS05510;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_011886064.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 18898 20721 . - . ID=gene-LDO38_RS05515;Name=LDO38_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05515;old_locus_tag=BVI2075_150026 NZ_CAJZAL010000057.1 Protein Homology CDS 18898 20721 . - 0 ID=cds-WP_011886063.1;Parent=gene-LDO38_RS05515;Dbxref=GenBank:WP_011886063.1;Name=WP_011886063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415510.1;locus_tag=LDO38_RS05515;product=tetratricopeptide repeat protein;protein_id=WP_011886063.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 20808 21635 . + . ID=gene-LDO38_RS05520;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=LDO38_RS05520;old_locus_tag=BVI2075_150027 NZ_CAJZAL010000057.1 Protein Homology CDS 20808 21635 . + 0 ID=cds-WP_011886062.1;Parent=gene-LDO38_RS05520;Dbxref=GenBank:WP_011886062.1;Name=WP_011886062.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012431652.1;locus_tag=LDO38_RS05520;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_011886062.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 21673 22779 . + . ID=gene-LDO38_RS05525;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=LDO38_RS05525;old_locus_tag=BVI2075_150028 NZ_CAJZAL010000057.1 Protein Homology CDS 21673 22779 . + 0 ID=cds-WP_069246329.1;Parent=gene-LDO38_RS05525;Dbxref=GenBank:WP_069246329.1;Name=WP_069246329.1;Ontology_term=GO:0006284,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009972864.1;locus_tag=LDO38_RS05525;product=A/G-specific adenine glycosylase;protein_id=WP_069246329.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 22897 23535 . - . ID=gene-LDO38_RS05530;Name=LDO38_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05530;old_locus_tag=BVI2075_150029 NZ_CAJZAL010000057.1 Protein Homology CDS 22897 23535 . - 0 ID=cds-WP_011886060.1;Parent=gene-LDO38_RS05530;Dbxref=GenBank:WP_011886060.1;Name=WP_011886060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600699.1;locus_tag=LDO38_RS05530;product=LON peptidase substrate-binding domain-containing protein;protein_id=WP_011886060.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 23563 24471 . - . ID=gene-LDO38_RS05535;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=LDO38_RS05535;old_locus_tag=BVI2075_150030 NZ_CAJZAL010000057.1 Protein Homology CDS 23563 24471 . - 0 ID=cds-WP_034192566.1;Parent=gene-LDO38_RS05535;Dbxref=GenBank:WP_034192566.1;Name=WP_034192566.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763369.1;locus_tag=LDO38_RS05535;product=RNase adapter RapZ;protein_id=WP_034192566.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 24547 25515 . - . ID=gene-LDO38_RS05540;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=LDO38_RS05540;old_locus_tag=BVI2075_150031 NZ_CAJZAL010000057.1 Protein Homology CDS 24547 25515 . - 0 ID=cds-WP_006483133.1;Parent=gene-LDO38_RS05540;Dbxref=GenBank:WP_006483133.1;Name=WP_006483133.1;Ontology_term=GO:0000160,GO:0006109,GO:0000155,GO:0005524;gbkey=CDS;gene=hprK;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of carbohydrate metabolic process|0006109||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877041.1;locus_tag=LDO38_RS05540;product=HPr(Ser) kinase/phosphatase;protein_id=WP_006483133.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 25645 26157 . - . ID=gene-LDO38_RS05545;Name=LDO38_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05545;old_locus_tag=BVI2075_150032 NZ_CAJZAL010000057.1 Protein Homology CDS 25645 26157 . - 0 ID=cds-WP_011886058.1;Parent=gene-LDO38_RS05545;Dbxref=GenBank:WP_011886058.1;Name=WP_011886058.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534308.1;locus_tag=LDO38_RS05545;product=PTS sugar transporter subunit IIA;protein_id=WP_011886058.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 26352 26711 . - . ID=gene-LDO38_RS05550;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=LDO38_RS05550;old_locus_tag=BVI2075_150033 NZ_CAJZAL010000057.1 Protein Homology CDS 26352 26711 . - 0 ID=cds-WP_011886057.1;Parent=gene-LDO38_RS05550;Dbxref=GenBank:WP_011886057.1;Name=WP_011886057.1;Ontology_term=GO:0045182,GO:0005840;gbkey=CDS;gene=hpf;go_component=ribosome|0005840||IEA;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195219.1;locus_tag=LDO38_RS05550;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;protein_id=WP_011886057.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 26870 28375 . - . ID=gene-LDO38_RS05555;Name=LDO38_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05555;old_locus_tag=BVI2075_150034 NZ_CAJZAL010000057.1 Protein Homology CDS 26870 28375 . - 0 ID=cds-WP_011886056.1;Parent=gene-LDO38_RS05555;Dbxref=GenBank:WP_011886056.1;Name=WP_011886056.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195216.1;locus_tag=LDO38_RS05555;product=RNA polymerase factor sigma-54;protein_id=WP_011886056.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 28538 29314 . - . ID=gene-LDO38_RS05560;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=LDO38_RS05560;old_locus_tag=BVI2075_150035 NZ_CAJZAL010000057.1 Protein Homology CDS 28538 29314 . - 0 ID=cds-WP_011886055.1;Parent=gene-LDO38_RS05560;Dbxref=GenBank:WP_011886055.1;Name=WP_011886055.1;Ontology_term=GO:0015920,GO:0015221,GO:0042626,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886055.1;locus_tag=LDO38_RS05560;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_011886055.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 29311 29976 . - . ID=gene-LDO38_RS05565;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=LDO38_RS05565;old_locus_tag=BVI2075_150036 NZ_CAJZAL010000057.1 Protein Homology CDS 29311 29976 . - 0 ID=cds-WP_011886054.1;Parent=gene-LDO38_RS05565;Dbxref=GenBank:WP_011886054.1;Name=WP_011886054.1;Ontology_term=GO:0015920,GO:0001530,GO:0042597;gbkey=CDS;gene=lptA;go_component=periplasmic space|0042597||IEA;go_function=lipopolysaccharide binding|0001530||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752624.1;locus_tag=LDO38_RS05565;product=lipopolysaccharide transport periplasmic protein LptA;protein_id=WP_011886054.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 29997 30611 . - . ID=gene-LDO38_RS05570;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=LDO38_RS05570;old_locus_tag=BVI2075_150037 NZ_CAJZAL010000057.1 Protein Homology CDS 29997 30611 . - 0 ID=cds-WP_011886053.1;Parent=gene-LDO38_RS05570;Dbxref=GenBank:WP_011886053.1;Name=WP_011886053.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptC;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893044.1;locus_tag=LDO38_RS05570;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_011886053.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 30615 31151 . - . ID=gene-LDO38_RS05575;Name=LDO38_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05575;old_locus_tag=BVI2075_150038 NZ_CAJZAL010000057.1 Protein Homology CDS 30615 31151 . - 0 ID=cds-WP_011886052.1;Parent=gene-LDO38_RS05575;Dbxref=GenBank:WP_011886052.1;Name=WP_011886052.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010113872.1;locus_tag=LDO38_RS05575;product=KdsC family phosphatase;protein_id=WP_011886052.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 31151 32134 . - . ID=gene-LDO38_RS05580;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=LDO38_RS05580;old_locus_tag=BVI2075_150039 NZ_CAJZAL010000057.1 Protein Homology CDS 31151 32134 . - 0 ID=cds-WP_014723665.1;Parent=gene-LDO38_RS05580;Dbxref=GenBank:WP_014723665.1;Name=WP_014723665.1;gbkey=CDS;gene=kdsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195206.1;locus_tag=LDO38_RS05580;product=arabinose 5-phosphate isomerase KdsD;protein_id=WP_014723665.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 32260 34266 . + . ID=gene-LDO38_RS05585;Name=LDO38_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05585;old_locus_tag=BVI2075_150040 NZ_CAJZAL010000057.1 Protein Homology CDS 32260 34266 . + 0 ID=cds-WP_011886050.1;Parent=gene-LDO38_RS05585;Dbxref=GenBank:WP_011886050.1;Name=WP_011886050.1;Ontology_term=GO:0006812,GO:0055085,GO:1902600,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195204.1;locus_tag=LDO38_RS05585;product=monovalent cation:proton antiporter family protein;protein_id=WP_011886050.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 34377 34943 . + . ID=gene-LDO38_RS05590;Name=LDO38_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05590;old_locus_tag=BVI2075_150041 NZ_CAJZAL010000057.1 Protein Homology CDS 34377 34943 . + 0 ID=cds-WP_011886049.1;Parent=gene-LDO38_RS05590;Dbxref=GenBank:WP_011886049.1;Name=WP_011886049.1;Ontology_term=GO:0006168,GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA,nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212706.1;locus_tag=LDO38_RS05590;product=adenine phosphoribosyltransferase;protein_id=WP_011886049.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 34978 35592 . + . ID=gene-LDO38_RS05595;Name=LDO38_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05595;old_locus_tag=BVI2075_150042 NZ_CAJZAL010000057.1 Protein Homology CDS 34978 35592 . + 0 ID=cds-WP_011886048.1;Parent=gene-LDO38_RS05595;Dbxref=GenBank:WP_011886048.1;Name=WP_011886048.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896023.1;locus_tag=LDO38_RS05595;product=LysE family translocator;protein_id=WP_011886048.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 35598 36455 . + . ID=gene-LDO38_RS05600;Name=LDO38_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05600;old_locus_tag=BVI2075_150043 NZ_CAJZAL010000057.1 Protein Homology CDS 35598 36455 . + 0 ID=cds-WP_014723663.1;Parent=gene-LDO38_RS05600;Dbxref=GenBank:WP_014723663.1;Name=WP_014723663.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759036.1;locus_tag=LDO38_RS05600;product=NUDIX hydrolase;protein_id=WP_014723663.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 36559 37443 . + . ID=gene-LDO38_RS05605;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=LDO38_RS05605;old_locus_tag=BVI2075_150044 NZ_CAJZAL010000057.1 Protein Homology CDS 36559 37443 . + 0 ID=cds-WP_011886046.1;Parent=gene-LDO38_RS05605;Dbxref=GenBank:WP_011886046.1;Name=WP_011886046.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522850.1;locus_tag=LDO38_RS05605;product=formyltetrahydrofolate deformylase;protein_id=WP_011886046.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 37545 38627 . - . ID=gene-LDO38_RS05610;Name=LDO38_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05610;old_locus_tag=BVI2075_150046 NZ_CAJZAL010000057.1 Protein Homology CDS 37545 38627 . - 0 ID=cds-WP_014723662.1;Parent=gene-LDO38_RS05610;Dbxref=GenBank:WP_014723662.1;Name=WP_014723662.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917426.1;locus_tag=LDO38_RS05610;product=AI-2E family transporter;protein_id=WP_014723662.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 38885 41770 . - . ID=gene-LDO38_RS05615;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=LDO38_RS05615;old_locus_tag=BVI2075_150047 NZ_CAJZAL010000057.1 Protein Homology CDS 38885 41770 . - 0 ID=cds-WP_011886044.1;Parent=gene-LDO38_RS05615;Dbxref=GenBank:WP_011886044.1;Name=WP_011886044.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090680.1;locus_tag=LDO38_RS05615;product=excinuclease ABC subunit UvrA;protein_id=WP_011886044.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 42033 43220 . + . ID=gene-LDO38_RS05620;Name=LDO38_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05620;old_locus_tag=BVI2075_150048 NZ_CAJZAL010000057.1 Protein Homology CDS 42033 43220 . + 0 ID=cds-WP_014723660.1;Parent=gene-LDO38_RS05620;Dbxref=GenBank:WP_014723660.1;Name=WP_014723660.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886043.1;locus_tag=LDO38_RS05620;product=MFS transporter;protein_id=WP_014723660.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 43324 43875 . + . ID=gene-LDO38_RS05625;Name=LDO38_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05625;old_locus_tag=BVI2075_150049 NZ_CAJZAL010000057.1 Protein Homology CDS 43324 43875 . + 0 ID=cds-WP_059461221.1;Parent=gene-LDO38_RS05625;Dbxref=GenBank:WP_059461221.1;Name=WP_059461221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353211.1;locus_tag=LDO38_RS05625;product=single-stranded DNA-binding protein;protein_id=WP_059461221.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 44132 45331 . + . ID=gene-LDO38_RS05630;Name=LDO38_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05630;old_locus_tag=BVI2075_150051 NZ_CAJZAL010000057.1 Protein Homology CDS 44132 45331 . + 0 ID=cds-WP_069239275.1;Parent=gene-LDO38_RS05630;Dbxref=GenBank:WP_069239275.1;Name=WP_069239275.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011515203.1;locus_tag=LDO38_RS05630;product=tyrosine-type recombinase/integrase;protein_id=WP_069239275.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 45328 46950 . + . ID=gene-LDO38_RS05635;Name=LDO38_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05635;old_locus_tag=BVI2075_150053 NZ_CAJZAL010000057.1 Protein Homology CDS 45328 46950 . + 0 ID=cds-WP_080484308.1;Parent=gene-LDO38_RS05635;Dbxref=GenBank:WP_080484308.1;Name=WP_080484308.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.6;locus_tag=LDO38_RS05635;product=site-specific integrase;protein_id=WP_080484308.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 46922 48946 . + . ID=gene-LDO38_RS05640;Name=LDO38_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05640;old_locus_tag=BVI2075_150056 NZ_CAJZAL010000057.1 Protein Homology CDS 46922 48946 . + 0 ID=cds-WP_435520906.1;Parent=gene-LDO38_RS05640;Dbxref=GenBank:WP_435520906.1;Name=WP_435520906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011515204.1;locus_tag=LDO38_RS05640;product=integrase;protein_id=WP_435520906.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 48924 49364 . + . ID=gene-LDO38_RS05645;Name=LDO38_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05645;old_locus_tag=BVI2075_150057 NZ_CAJZAL010000057.1 Protein Homology CDS 48924 49364 . + 0 ID=cds-WP_124259937.1;Parent=gene-LDO38_RS05645;Dbxref=GenBank:WP_124259937.1;Name=WP_124259937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008648110.1;locus_tag=LDO38_RS05645;product=hypothetical protein;protein_id=WP_124259937.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 49432 49722 . - . ID=gene-LDO38_RS05650;Name=LDO38_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05650;old_locus_tag=BVI2075_150058 NZ_CAJZAL010000057.1 Protein Homology CDS 49432 49722 . - 0 ID=cds-WP_069239277.1;Parent=gene-LDO38_RS05650;Dbxref=GenBank:WP_069239277.1;Name=WP_069239277.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024949.6;locus_tag=LDO38_RS05650;product=helix-turn-helix domain-containing protein;protein_id=WP_069239277.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 51013 51318 . + . ID=gene-LDO38_RS05655;Name=LDO38_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05655;old_locus_tag=BVI2075_150064 NZ_CAJZAL010000057.1 Protein Homology CDS 51013 51318 . + 0 ID=cds-WP_069239278.1;Parent=gene-LDO38_RS05655;Dbxref=GenBank:WP_069239278.1;Name=WP_069239278.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008906609.1;locus_tag=LDO38_RS05655;product=helix-turn-helix domain-containing protein;protein_id=WP_069239278.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 51299 52285 . + . ID=gene-LDO38_RS05660;Name=LDO38_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05660;old_locus_tag=BVI2075_150065 NZ_CAJZAL010000057.1 Protein Homology CDS 51299 52285 . + 0 ID=cds-WP_080484309.1;Parent=gene-LDO38_RS05660;Dbxref=GenBank:WP_080484309.1;Name=WP_080484309.1;Ontology_term=GO:0006974,GO:0003723,GO:0003964,GO:0046872;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-directed DNA polymerase activity|0003964||IEA,metal ion binding|0046872||IEA;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: protein motif:HMM:NF012307.6;locus_tag=LDO38_RS05660;product=reverse transcriptase family protein;protein_id=WP_080484309.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 52457 53500 . + . ID=gene-LDO38_RS05665;Name=LDO38_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05665;old_locus_tag=BVI2075_150066 NZ_CAJZAL010000057.1 Protein Homology CDS 52457 53500 . + 0 ID=cds-WP_224056244.1;Parent=gene-LDO38_RS05665;Dbxref=GenBank:WP_224056244.1;Name=WP_224056244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011798328.1;locus_tag=LDO38_RS05665;product=ABC-three component system protein;protein_id=WP_224056244.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 53497 53991 . + . ID=gene-LDO38_RS30150;Name=LDO38_RS30150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30150;old_locus_tag=BVI2075_150067 NZ_CAJZAL010000057.1 Protein Homology CDS 53497 53991 . + 0 ID=cds-WP_347877299.1;Parent=gene-LDO38_RS30150;Dbxref=GenBank:WP_347877299.1;Name=WP_347877299.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042474.4;locus_tag=LDO38_RS30150;product=ABC-three component system middle component 2;protein_id=WP_347877299.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 53982 55898 . + . ID=gene-LDO38_RS05670;Name=LDO38_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05670;old_locus_tag=BVI2075_150068 NZ_CAJZAL010000057.1 Protein Homology CDS 53982 55898 . + 0 ID=cds-WP_069239281.1;Parent=gene-LDO38_RS05670;Dbxref=GenBank:WP_069239281.1;Name=WP_069239281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011798326.1;locus_tag=LDO38_RS05670;product=hypothetical protein;protein_id=WP_069239281.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 55979 59830 . + . ID=gene-LDO38_RS05675;Name=LDO38_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05675;old_locus_tag=BVI2075_150069 NZ_CAJZAL010000057.1 GeneMarkS-2+ CDS 55979 59830 . + 0 ID=cds-WP_124259936.1;Parent=gene-LDO38_RS05675;Dbxref=GenBank:WP_124259936.1;Name=WP_124259936.1;Ontology_term=GO:0006278,GO:0003723,GO:0003964;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-directed DNA polymerase activity|0003964||IEA;go_process=RNA-templated DNA biosynthetic process|0006278||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS05675;product=RNA-directed DNA polymerase;protein_id=WP_124259936.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 60102 61757 . + . ID=gene-LDO38_RS05680;Name=LDO38_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05680;old_locus_tag=BVI2075_150070 NZ_CAJZAL010000057.1 GeneMarkS-2+ CDS 60102 61757 . + 0 ID=cds-WP_069239284.1;Parent=gene-LDO38_RS05680;Dbxref=GenBank:WP_069239284.1;Name=WP_069239284.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS05680;product=hypothetical protein;protein_id=WP_069239284.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 62178 63962 . + . ID=gene-LDO38_RS05685;Name=LDO38_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05685;old_locus_tag=BVI2075_150073 NZ_CAJZAL010000057.1 Protein Homology CDS 62178 63962 . + 0 ID=cds-WP_069239285.1;Parent=gene-LDO38_RS05685;Dbxref=GenBank:WP_069239285.1;Name=WP_069239285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020703569.1;locus_tag=LDO38_RS05685;product=GmrSD restriction endonuclease domain-containing protein;protein_id=WP_069239285.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 63959 66145 . + . ID=gene-LDO38_RS05690;Name=LDO38_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05690;old_locus_tag=BVI2075_150074 NZ_CAJZAL010000057.1 Protein Homology CDS 63959 66145 . + 0 ID=cds-WP_069239286.1;Parent=gene-LDO38_RS05690;Dbxref=GenBank:WP_069239286.1;Name=WP_069239286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020703568.1;locus_tag=LDO38_RS05690;product=DUF262 domain-containing protein;protein_id=WP_069239286.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 66824 67588 . + . ID=gene-LDO38_RS05695;Name=LDO38_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05695;old_locus_tag=BVI2075_150078 NZ_CAJZAL010000057.1 Protein Homology CDS 66824 67588 . + 0 ID=cds-WP_011886041.1;Parent=gene-LDO38_RS05695;Dbxref=GenBank:WP_011886041.1;Name=WP_011886041.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334232.1;locus_tag=LDO38_RS05695;product=ParA family protein;protein_id=WP_011886041.1;transl_table=11 NZ_CAJZAL010000057.1 RefSeq gene 68040 68621 . + . ID=gene-LDO38_RS05700;Name=phaP;gbkey=Gene;gene=phaP;gene_biotype=protein_coding;locus_tag=LDO38_RS05700;old_locus_tag=BVI2075_150080 NZ_CAJZAL010000057.1 Protein Homology CDS 68040 68621 . + 0 ID=cds-WP_011886040.1;Parent=gene-LDO38_RS05700;Dbxref=GenBank:WP_011886040.1;Name=WP_011886040.1;Note=Members of this family are phasins (small proteins associated with inclusions such as PHA granules). Note that several different families of phasins have been named PhaP despite very little sequence similarity to each other.;gbkey=CDS;gene=phaP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694404.1;locus_tag=LDO38_RS05700;product=TIGR01841 family phasin;protein_id=WP_011886040.1;transl_table=11 ##sequence-region NZ_CAJZAL010000058.1 1 1804 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000058.1 RefSeq region 1 1804 . + . ID=NZ_CAJZAL010000058.1:1..1804;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_150 NZ_CAJZAL010000058.1 RefSeq pseudogene 1 892 . + . ID=gene-LDO38_RS05705;Name=LDO38_RS05705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS05705;old_locus_tag=BVI2075_1500001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000058.1 Protein Homology CDS 1 892 . + 1 ID=cds-LDO38_RS05705;Parent=gene-LDO38_RS05705;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726109.1;locus_tag=LDO38_RS05705;partial=true;product=transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000058.1 RefSeq gene 1025 1804 . + . ID=gene-LDO38_RS05710;Name=LDO38_RS05710;end_range=1804,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05710;partial=true NZ_CAJZAL010000058.1 Protein Homology CDS 1025 1804 . + 0 ID=cds-WP_224056245.1;Parent=gene-LDO38_RS05710;Dbxref=GenBank:WP_224056245.1;Name=WP_224056245.1;end_range=1804,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012371993.1;locus_tag=LDO38_RS05710;partial=true;product=amidohydrolase family protein;protein_id=WP_224056245.1;transl_table=11 ##sequence-region NZ_CAJZAL010000059.1 1 919 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000059.1 RefSeq region 1 919 . + . ID=NZ_CAJZAL010000059.1:1..919;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_151 NZ_CAJZAL010000059.1 RefSeq gene 1 919 . - . ID=gene-LDO38_RS05715;Name=LDO38_RS05715;end_range=919,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05715;partial=true;start_range=.,1 NZ_CAJZAL010000059.1 Protein Homology CDS 1 919 . - 2 ID=cds-WP_224056246.1;Parent=gene-LDO38_RS05715;Dbxref=GenBank:WP_224056246.1;Name=WP_224056246.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;end_range=919,.;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212800.1;locus_tag=LDO38_RS05715;partial=true;product=efflux transporter outer membrane subunit;protein_id=WP_224056246.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAL010000060.1 1 1205 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000060.1 RefSeq region 1 1205 . + . ID=NZ_CAJZAL010000060.1:1..1205;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_152 NZ_CAJZAL010000060.1 RefSeq pseudogene 1 1205 . - . ID=gene-LDO38_RS05720;Name=LDO38_RS05720;end_range=1205,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS05720;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000060.1 Protein Homology CDS 1 1205 . - 1 ID=cds-LDO38_RS05720;Parent=gene-LDO38_RS05720;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1205,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414054.1;locus_tag=LDO38_RS05720;partial=true;product=ESPR-type extended signal peptide-containing protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAL010000061.1 1 5285 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000061.1 RefSeq region 1 5285 . + . ID=NZ_CAJZAL010000061.1:1..5285;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_153 NZ_CAJZAL010000061.1 RefSeq gene 1 505 . + . ID=gene-LDO38_RS05725;Name=LDO38_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05725;old_locus_tag=BVI2075_1530001;partial=true;start_range=.,1 NZ_CAJZAL010000061.1 Protein Homology CDS 1 505 . + 1 ID=cds-WP_224056247.1;Parent=gene-LDO38_RS05725;Dbxref=GenBank:WP_224056247.1;Name=WP_224056247.1;Ontology_term=GO:0008897;gbkey=CDS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885454.1;locus_tag=LDO38_RS05725;partial=true;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_224056247.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000061.1 RefSeq pseudogene 477 1106 . - . ID=gene-LDO38_RS05730;Name=LDO38_RS05730;end_range=1106,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS05730;partial=true;pseudo=true;start_range=.,477 NZ_CAJZAL010000061.1 Protein Homology CDS 477 1106 . - 0 ID=cds-LDO38_RS05730;Parent=gene-LDO38_RS05730;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1106,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549423.1;locus_tag=LDO38_RS05730;partial=true;product=transporter substrate-binding domain-containing protein;pseudo=true;start_range=.,477;transl_table=11 NZ_CAJZAL010000061.1 RefSeq gene 1259 2782 . + . ID=gene-LDO38_RS05735;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=LDO38_RS05735;old_locus_tag=BVI2075_1530004 NZ_CAJZAL010000061.1 Protein Homology CDS 1259 2782 . + 0 ID=cds-WP_014723315.1;Parent=gene-LDO38_RS05735;Dbxref=GenBank:WP_014723315.1;Name=WP_014723315.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657420.1;locus_tag=LDO38_RS05735;product=histidine ammonia-lyase;protein_id=WP_014723315.1;transl_table=11 NZ_CAJZAL010000061.1 RefSeq gene 2787 3482 . + . ID=gene-LDO38_RS05740;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=LDO38_RS05740;old_locus_tag=BVI2075_1530005 NZ_CAJZAL010000061.1 Protein Homology CDS 2787 3482 . + 0 ID=cds-WP_011885452.1;Parent=gene-LDO38_RS05740;Dbxref=GenBank:WP_011885452.1;Name=WP_011885452.1;Ontology_term=GO:0006355,GO:0006547,GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-histidine metabolic process|0006547||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010116292.1;locus_tag=LDO38_RS05740;product=histidine utilization repressor;protein_id=WP_011885452.1;transl_table=11 NZ_CAJZAL010000061.1 RefSeq gene 3523 5211 . + . ID=gene-LDO38_RS05745;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=LDO38_RS05745;old_locus_tag=BVI2075_1530006 NZ_CAJZAL010000061.1 Protein Homology CDS 3523 5211 . + 0 ID=cds-WP_011885451.1;Parent=gene-LDO38_RS05745;Dbxref=GenBank:WP_011885451.1;Name=WP_011885451.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600548.1;locus_tag=LDO38_RS05745;product=urocanate hydratase;protein_id=WP_011885451.1;transl_table=11 ##sequence-region NZ_CAJZAL010000062.1 1 519 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000062.1 RefSeq region 1 519 . + . ID=NZ_CAJZAL010000062.1:1..519;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_154 NZ_CAJZAL010000062.1 RefSeq gene 1 519 . - . ID=gene-LDO38_RS05750;Name=LDO38_RS05750;end_range=519,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05750;partial=true;start_range=.,1 NZ_CAJZAL010000062.1 Protein Homology CDS 1 519 . - 0 ID=cds-WP_224056248.1;Parent=gene-LDO38_RS05750;Dbxref=GenBank:WP_224056248.1;Name=WP_224056248.1;Ontology_term=GO:0016901,GO:0070968;end_range=519,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA,pyrroloquinoline quinone binding|0070968||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527498.1;locus_tag=LDO38_RS05750;partial=true;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_224056248.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAL010000063.1 1 17065 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000063.1 RefSeq region 1 17065 . + . ID=NZ_CAJZAL010000063.1:1..17065;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_155 NZ_CAJZAL010000063.1 RefSeq pseudogene 234 391 . - . ID=gene-LDO38_RS05755;Name=LDO38_RS05755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS05755;old_locus_tag=BVI2075_1550002;pseudo=true NZ_CAJZAL010000063.1 Protein Homology CDS 234 391 . - 0 ID=cds-LDO38_RS05755;Parent=gene-LDO38_RS05755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900233.1;locus_tag=LDO38_RS05755;product=DUF2970 domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAL010000063.1 RefSeq gene 524 2596 . - . ID=gene-LDO38_RS05760;Name=LDO38_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05760;old_locus_tag=BVI2075_1550003 NZ_CAJZAL010000063.1 Protein Homology CDS 524 2596 . - 0 ID=cds-WP_224056249.1;Parent=gene-LDO38_RS05760;Dbxref=GenBank:WP_224056249.1;Name=WP_224056249.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759547.1;locus_tag=LDO38_RS05760;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_224056249.1;transl_table=11 NZ_CAJZAL010000063.1 RefSeq gene 2637 3281 . - . ID=gene-LDO38_RS05765;Name=LDO38_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05765;old_locus_tag=BVI2075_1550004 NZ_CAJZAL010000063.1 Protein Homology CDS 2637 3281 . - 0 ID=cds-WP_011881434.1;Parent=gene-LDO38_RS05765;Dbxref=GenBank:WP_011881434.1;Name=WP_011881434.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900235.1;locus_tag=LDO38_RS05765;product=glutathione S-transferase family protein;protein_id=WP_011881434.1;transl_table=11 NZ_CAJZAL010000063.1 RefSeq gene 3408 4379 . + . ID=gene-LDO38_RS05770;Name=LDO38_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05770;old_locus_tag=BVI2075_1550005 NZ_CAJZAL010000063.1 Protein Homology CDS 3408 4379 . + 0 ID=cds-WP_224056250.1;Parent=gene-LDO38_RS05770;Dbxref=GenBank:WP_224056250.1;Name=WP_224056250.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881433.1;locus_tag=LDO38_RS05770;product=LysR family transcriptional regulator;protein_id=WP_224056250.1;transl_table=11 NZ_CAJZAL010000063.1 RefSeq gene 4454 5110 . - . ID=gene-LDO38_RS05775;Name=LDO38_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05775;old_locus_tag=BVI2075_1550006 NZ_CAJZAL010000063.1 Protein Homology CDS 4454 5110 . - 0 ID=cds-WP_224056251.1;Parent=gene-LDO38_RS05775;Dbxref=GenBank:WP_224056251.1;Name=WP_224056251.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750782.1;locus_tag=LDO38_RS05775;product=TetR/AcrR family transcriptional regulator;protein_id=WP_224056251.1;transl_table=11 NZ_CAJZAL010000063.1 RefSeq gene 5198 6100 . + . ID=gene-LDO38_RS05780;Name=LDO38_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05780;old_locus_tag=BVI2075_1550008 NZ_CAJZAL010000063.1 Protein Homology CDS 5198 6100 . + 0 ID=cds-WP_224056252.1;Parent=gene-LDO38_RS05780;Dbxref=GenBank:WP_224056252.1;Name=WP_224056252.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529196.1;locus_tag=LDO38_RS05780;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_224056252.1;transl_table=11 NZ_CAJZAL010000063.1 RefSeq gene 6097 7659 . + . ID=gene-LDO38_RS05785;Name=LDO38_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05785;old_locus_tag=BVI2075_1550007 NZ_CAJZAL010000063.1 Protein Homology CDS 6097 7659 . + 0 ID=cds-WP_176043480.1;Parent=gene-LDO38_RS05785;Dbxref=GenBank:WP_176043480.1;Name=WP_176043480.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217562.1;locus_tag=LDO38_RS05785;product=flavin-containing monooxygenase;protein_id=WP_176043480.1;transl_table=11 NZ_CAJZAL010000063.1 RefSeq gene 7667 8653 . + . ID=gene-LDO38_RS05790;Name=LDO38_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05790;old_locus_tag=BVI2075_1550009 NZ_CAJZAL010000063.1 Protein Homology CDS 7667 8653 . + 0 ID=cds-WP_034194920.1;Parent=gene-LDO38_RS05790;Dbxref=GenBank:WP_034194920.1;Name=WP_034194920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365449.1;locus_tag=LDO38_RS05790;product=alpha/beta fold hydrolase;protein_id=WP_034194920.1;transl_table=11 NZ_CAJZAL010000063.1 RefSeq gene 8805 9203 . - . ID=gene-LDO38_RS05795;Name=LDO38_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05795;old_locus_tag=BVI2075_1550010 NZ_CAJZAL010000063.1 Protein Homology CDS 8805 9203 . - 0 ID=cds-WP_059462085.1;Parent=gene-LDO38_RS05795;Dbxref=GenBank:WP_059462085.1;Name=WP_059462085.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255591.1;locus_tag=LDO38_RS05795;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_059462085.1;transl_table=11 NZ_CAJZAL010000063.1 RefSeq pseudogene 9576 9799 . + . ID=gene-LDO38_RS30380;Name=LDO38_RS30380;end_range=9799,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30380;old_locus_tag=BVI2075_1550011;partial=true;pseudo=true NZ_CAJZAL010000063.1 Protein Homology CDS 9576 9799 . + 0 ID=cds-LDO38_RS30380;Parent=gene-LDO38_RS30380;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=9799,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900242.1;locus_tag=LDO38_RS30380;partial=true;product=collagen-like triple helix repeat-containing protein;pseudo=true;transl_table=11 NZ_CAJZAL010000063.1 RefSeq gene 9810 11192 . + . ID=gene-LDO38_RS05800;Name=LDO38_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05800;old_locus_tag=BVI2075_1550013;partial=true;start_range=.,9810 NZ_CAJZAL010000063.1 Protein Homology CDS 9810 11192 . + 0 ID=cds-WP_435520907.1;Parent=gene-LDO38_RS05800;Dbxref=GenBank:WP_435520907.1;Name=WP_435520907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759538.1;locus_tag=LDO38_RS05800;partial=true;product=collagen-like triple helix repeat-containing protein;protein_id=WP_435520907.1;start_range=.,9810;transl_table=11 NZ_CAJZAL010000063.1 RefSeq gene 11313 12596 . + . ID=gene-LDO38_RS05805;Name=LDO38_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05805;old_locus_tag=BVI2075_1550014 NZ_CAJZAL010000063.1 Protein Homology CDS 11313 12596 . + 0 ID=cds-WP_069246558.1;Parent=gene-LDO38_RS05805;Dbxref=GenBank:WP_069246558.1;Name=WP_069246558.1;Ontology_term=GO:0006481,GO:0004671,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity|0004671||IEA;go_process=C-terminal protein methylation|0006481||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495601.1;locus_tag=LDO38_RS05805;product=isoprenylcysteine carboxylmethyltransferase family protein;protein_id=WP_069246558.1;transl_table=11 NZ_CAJZAL010000063.1 RefSeq gene 12743 13315 . + . ID=gene-LDO38_RS05810;Name=LDO38_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05810;old_locus_tag=BVI2075_1550015 NZ_CAJZAL010000063.1 Protein Homology CDS 12743 13315 . + 0 ID=cds-WP_045578240.1;Parent=gene-LDO38_RS05810;Dbxref=GenBank:WP_045578240.1;Name=WP_045578240.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495604.1;locus_tag=LDO38_RS05810;product=NADPH-dependent FMN reductase;protein_id=WP_045578240.1;transl_table=11 NZ_CAJZAL010000063.1 RefSeq gene 13335 13991 . - . ID=gene-LDO38_RS05815;Name=LDO38_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05815;old_locus_tag=BVI2075_1550016 NZ_CAJZAL010000063.1 Protein Homology CDS 13335 13991 . - 0 ID=cds-WP_069246559.1;Parent=gene-LDO38_RS05815;Dbxref=GenBank:WP_069246559.1;Name=WP_069246559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755241.1;locus_tag=LDO38_RS05815;product=DUF2894 domain-containing protein;protein_id=WP_069246559.1;transl_table=11 NZ_CAJZAL010000063.1 RefSeq gene 13988 14632 . - . ID=gene-LDO38_RS05820;Name=LDO38_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05820;old_locus_tag=BVI2075_1550017 NZ_CAJZAL010000063.1 Protein Homology CDS 13988 14632 . - 0 ID=cds-WP_014724507.1;Parent=gene-LDO38_RS05820;Dbxref=GenBank:WP_014724507.1;Name=WP_014724507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217569.1;locus_tag=LDO38_RS05820;product=OmpA family protein;protein_id=WP_014724507.1;transl_table=11 NZ_CAJZAL010000063.1 RefSeq gene 14636 17065 . - . ID=gene-LDO38_RS05825;Name=LDO38_RS05825;end_range=17065,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05825;old_locus_tag=BVI2075_1550018;partial=true NZ_CAJZAL010000063.1 Protein Homology CDS 14636 17065 . - 0 ID=cds-WP_224056254.1;Parent=gene-LDO38_RS05825;Dbxref=GenBank:WP_224056254.1;Name=WP_224056254.1;end_range=17065,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356050.1;locus_tag=LDO38_RS05825;partial=true;product=DUF802 domain-containing protein;protein_id=WP_224056254.1;transl_table=11 ##sequence-region NZ_CAJZAL010000064.1 1 2366 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000064.1 RefSeq region 1 2366 . + . ID=NZ_CAJZAL010000064.1:1..2366;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_156 NZ_CAJZAL010000064.1 RefSeq pseudogene 1 574 . + . ID=gene-LDO38_RS05830;Name=LDO38_RS05830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS05830;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000064.1 Protein Homology CDS 1 574 . + 1 ID=cds-LDO38_RS05830;Parent=gene-LDO38_RS05830;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725816.1;locus_tag=LDO38_RS05830;partial=true;product=hydrogenase maturation factor HoxV/HupK;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000064.1 RefSeq gene 562 909 . + . ID=gene-LDO38_RS05835;Name=LDO38_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05835;old_locus_tag=BVI2075_1560002 NZ_CAJZAL010000064.1 Protein Homology CDS 562 909 . + 0 ID=cds-WP_011880072.1;Parent=gene-LDO38_RS05835;Dbxref=GenBank:WP_011880072.1;Name=WP_011880072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880072.1;locus_tag=LDO38_RS05835;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_011880072.1;transl_table=11 NZ_CAJZAL010000064.1 RefSeq gene 939 1976 . + . ID=gene-LDO38_RS05840;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=LDO38_RS05840;old_locus_tag=BVI2075_1560003 NZ_CAJZAL010000064.1 Protein Homology CDS 939 1976 . + 0 ID=cds-WP_131754505.1;Parent=gene-LDO38_RS05840;Dbxref=GenBank:WP_131754505.1;Name=WP_131754505.1;Ontology_term=GO:0036211,GO:0051604,GO:0000166,GO:0003924,GO:0016151,GO:0016530;gbkey=CDS;gene=hypB;go_function=nucleotide binding|0000166||IEA,GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA,metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725817.1;locus_tag=LDO38_RS05840;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_131754505.1;transl_table=11 NZ_CAJZAL010000064.1 RefSeq pseudogene 1973 2366 . + . ID=gene-LDO38_RS05845;Name=LDO38_RS05845;end_range=2366,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS05845;partial=true;pseudo=true NZ_CAJZAL010000064.1 Protein Homology CDS 1973 2366 . + 0 ID=cds-LDO38_RS05845;Parent=gene-LDO38_RS05845;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2366,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880074.1;locus_tag=LDO38_RS05845;partial=true;product=carbamoyltransferase HypF;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000065.1 1 1630 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000065.1 RefSeq region 1 1630 . + . ID=NZ_CAJZAL010000065.1:1..1630;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_157 NZ_CAJZAL010000065.1 RefSeq gene 250 1485 . + . ID=gene-LDO38_RS05850;Name=LDO38_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05850;old_locus_tag=BVI2075_1570001 NZ_CAJZAL010000065.1 Protein Homology CDS 250 1485 . + 0 ID=cds-WP_059606722.1;Parent=gene-LDO38_RS05850;Dbxref=GenBank:WP_059606722.1;Name=WP_059606722.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882724.1;locus_tag=LDO38_RS05850;product=IS110 family transposase;protein_id=WP_059606722.1;transl_table=11 ##sequence-region NZ_CAJZAL010000066.1 1 4791 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000066.1 RefSeq region 1 4791 . + . ID=NZ_CAJZAL010000066.1:1..4791;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_158 NZ_CAJZAL010000066.1 RefSeq pseudogene 1 112 . + . ID=gene-LDO38_RS05855;Name=LDO38_RS05855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS05855;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000066.1 Protein Homology CDS 1 112 . + 1 ID=cds-LDO38_RS05855;Parent=gene-LDO38_RS05855;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522660.1;locus_tag=LDO38_RS05855;partial=true;product=sugar kinase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000066.1 RefSeq gene 152 1251 . + . ID=gene-LDO38_RS05860;Name=LDO38_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05860;old_locus_tag=BVI2075_1580001;partial=true;start_range=.,152 NZ_CAJZAL010000066.1 Protein Homology CDS 152 1251 . + 2 ID=cds-WP_435520908.1;Parent=gene-LDO38_RS05860;Dbxref=GenBank:WP_435520908.1;Name=WP_435520908.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885877.1;locus_tag=LDO38_RS05860;partial=true;product=class II D-tagatose-bisphosphate aldolase non-catalytic subunit;protein_id=WP_435520908.1;start_range=.,152;transl_table=11 NZ_CAJZAL010000066.1 RefSeq gene 1366 2691 . + . ID=gene-LDO38_RS05865;Name=LDO38_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05865;old_locus_tag=BVI2075_1580002 NZ_CAJZAL010000066.1 Protein Homology CDS 1366 2691 . + 0 ID=cds-WP_011885876.1;Parent=gene-LDO38_RS05865;Dbxref=GenBank:WP_011885876.1;Name=WP_011885876.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601633.1;locus_tag=LDO38_RS05865;product=ABC transporter substrate-binding protein;protein_id=WP_011885876.1;transl_table=11 NZ_CAJZAL010000066.1 RefSeq gene 2804 3751 . + . ID=gene-LDO38_RS05870;Name=LDO38_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05870;old_locus_tag=BVI2075_1580003 NZ_CAJZAL010000066.1 Protein Homology CDS 2804 3751 . + 0 ID=cds-WP_041493882.1;Parent=gene-LDO38_RS05870;Dbxref=GenBank:WP_041493882.1;Name=WP_041493882.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896200.1;locus_tag=LDO38_RS05870;product=carbohydrate ABC transporter permease;protein_id=WP_041493882.1;transl_table=11 NZ_CAJZAL010000066.1 RefSeq gene 3748 4599 . + . ID=gene-LDO38_RS05875;Name=LDO38_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05875;old_locus_tag=BVI2075_1580004 NZ_CAJZAL010000066.1 Protein Homology CDS 3748 4599 . + 0 ID=cds-WP_014723543.1;Parent=gene-LDO38_RS05875;Dbxref=GenBank:WP_014723543.1;Name=WP_014723543.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484674.1;locus_tag=LDO38_RS05875;product=carbohydrate ABC transporter permease;protein_id=WP_014723543.1;transl_table=11 NZ_CAJZAL010000066.1 RefSeq pseudogene 4596 4791 . + . ID=gene-LDO38_RS05880;Name=LDO38_RS05880;end_range=4791,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS05880;partial=true;pseudo=true NZ_CAJZAL010000066.1 Protein Homology CDS 4596 4791 . + 0 ID=cds-LDO38_RS05880;Parent=gene-LDO38_RS05880;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4791,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496495.1;locus_tag=LDO38_RS05880;partial=true;product=HAD family phosphatase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000067.1 1 1655 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000067.1 RefSeq region 1 1655 . + . ID=NZ_CAJZAL010000067.1:1..1655;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_159 NZ_CAJZAL010000067.1 RefSeq gene 1261 1346 . + . ID=gene-LDO38_RS05885;Name=LDO38_RS05885;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS05885;old_locus_tag=BVI2075_TRNA28 NZ_CAJZAL010000067.1 tRNAscan-SE tRNA 1261 1346 . + . ID=rna-LDO38_RS05885;Parent=gene-LDO38_RS05885;anticodon=(pos:1295..1297);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS05885;product=tRNA-Tyr NZ_CAJZAL010000067.1 tRNAscan-SE exon 1261 1346 . + . ID=exon-LDO38_RS05885-1;Parent=rna-LDO38_RS05885;anticodon=(pos:1295..1297);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS05885;product=tRNA-Tyr NZ_CAJZAL010000067.1 RefSeq gene 1390 1463 . + . ID=gene-LDO38_RS05890;Name=LDO38_RS05890;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS05890;old_locus_tag=BVI2075_TRNA29 NZ_CAJZAL010000067.1 tRNAscan-SE tRNA 1390 1463 . + . ID=rna-LDO38_RS05890;Parent=gene-LDO38_RS05890;anticodon=(pos:1422..1424);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS05890;product=tRNA-Gly NZ_CAJZAL010000067.1 tRNAscan-SE exon 1390 1463 . + . ID=exon-LDO38_RS05890-1;Parent=rna-LDO38_RS05890;anticodon=(pos:1422..1424);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS05890;product=tRNA-Gly NZ_CAJZAL010000067.1 RefSeq gene 1488 1562 . + . ID=gene-LDO38_RS05895;Name=LDO38_RS05895;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS05895;old_locus_tag=BVI2075_TRNA30 NZ_CAJZAL010000067.1 tRNAscan-SE tRNA 1488 1562 . + . ID=rna-LDO38_RS05895;Parent=gene-LDO38_RS05895;anticodon=(pos:1520..1522);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS05895;product=tRNA-Thr NZ_CAJZAL010000067.1 tRNAscan-SE exon 1488 1562 . + . ID=exon-LDO38_RS05895-1;Parent=rna-LDO38_RS05895;anticodon=(pos:1520..1522);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS05895;product=tRNA-Thr ##sequence-region NZ_CAJZAL010000068.1 1 126161 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000068.1 RefSeq region 1 126161 . + . ID=NZ_CAJZAL010000068.1:1..126161;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_16 NZ_CAJZAL010000068.1 RefSeq gene 304 585 . - . ID=gene-LDO38_RS05900;Name=LDO38_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05900;old_locus_tag=BVI2075_160001 NZ_CAJZAL010000068.1 Protein Homology CDS 304 585 . - 0 ID=cds-WP_060121967.1;Parent=gene-LDO38_RS05900;Dbxref=GenBank:WP_060121967.1;Name=WP_060121967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496041.1;locus_tag=LDO38_RS05900;product=hypothetical protein;protein_id=WP_060121967.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 1083 1307 . - . ID=gene-LDO38_RS05905;Name=LDO38_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05905;old_locus_tag=BVI2075_160002 NZ_CAJZAL010000068.1 GeneMarkS-2+ CDS 1083 1307 . - 0 ID=cds-WP_134206944.1;Parent=gene-LDO38_RS05905;Dbxref=GenBank:WP_134206944.1;Name=WP_134206944.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS05905;product=hypothetical protein;protein_id=WP_134206944.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 1520 4300 . + . ID=gene-LDO38_RS05910;Name=LDO38_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05910;old_locus_tag=BVI2075_160003 NZ_CAJZAL010000068.1 Protein Homology CDS 1520 4300 . + 0 ID=cds-WP_069239172.1;Parent=gene-LDO38_RS05910;Dbxref=GenBank:WP_069239172.1;Name=WP_069239172.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760191.1;locus_tag=LDO38_RS05910;product=type VI secretion system Vgr family protein;protein_id=WP_069239172.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 4338 6269 . + . ID=gene-LDO38_RS05915;Name=LDO38_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05915;old_locus_tag=BVI2075_160004 NZ_CAJZAL010000068.1 Protein Homology CDS 4338 6269 . + 0 ID=cds-WP_080484289.1;Parent=gene-LDO38_RS05915;Dbxref=GenBank:WP_080484289.1;Name=WP_080484289.1;Ontology_term=GO:0016042,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722108.1;locus_tag=LDO38_RS05915;product=esterase/lipase family protein;protein_id=WP_080484289.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 6263 7306 . + . ID=gene-LDO38_RS05920;Name=LDO38_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05920;old_locus_tag=BVI2075_160006 NZ_CAJZAL010000068.1 Protein Homology CDS 6263 7306 . + 0 ID=cds-WP_224056255.1;Parent=gene-LDO38_RS05920;Dbxref=GenBank:WP_224056255.1;Name=WP_224056255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484527.1;locus_tag=LDO38_RS05920;product=T6SS immunity protein Tli4 family protein;protein_id=WP_224056255.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 7320 7607 . + . ID=gene-LDO38_RS05925;Name=LDO38_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05925 NZ_CAJZAL010000068.1 Protein Homology CDS 7320 7607 . + 0 ID=cds-WP_080484292.1;Parent=gene-LDO38_RS05925;Dbxref=GenBank:WP_080484292.1;Name=WP_080484292.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365977.1;locus_tag=LDO38_RS05925;product=PAAR domain-containing protein;protein_id=WP_080484292.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 7927 8295 . - . ID=gene-LDO38_RS05930;Name=LDO38_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05930 NZ_CAJZAL010000068.1 Protein Homology CDS 7927 8295 . - 0 ID=cds-WP_059474639.1;Parent=gene-LDO38_RS05930;Dbxref=GenBank:WP_059474639.1;Name=WP_059474639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011490147.1;locus_tag=LDO38_RS05930;product=helix-turn-helix domain-containing protein;protein_id=WP_059474639.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 8432 9274 . - . ID=gene-LDO38_RS05935;Name=LDO38_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05935;old_locus_tag=BVI2075_160009 NZ_CAJZAL010000068.1 Protein Homology CDS 8432 9274 . - 0 ID=cds-WP_224056256.1;Parent=gene-LDO38_RS05935;Dbxref=GenBank:WP_224056256.1;Name=WP_224056256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416491.1;locus_tag=LDO38_RS05935;product=hypothetical protein;protein_id=WP_224056256.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 9535 10341 . - . ID=gene-LDO38_RS05940;Name=LDO38_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05940;old_locus_tag=BVI2075_160010 NZ_CAJZAL010000068.1 Protein Homology CDS 9535 10341 . - 0 ID=cds-WP_046423681.1;Parent=gene-LDO38_RS05940;Dbxref=GenBank:WP_046423681.1;Name=WP_046423681.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019719735.1;locus_tag=LDO38_RS05940;product=S1 family peptidase;protein_id=WP_046423681.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 10708 13182 . - . ID=gene-LDO38_RS05945;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=LDO38_RS05945;old_locus_tag=BVI2075_160011 NZ_CAJZAL010000068.1 Protein Homology CDS 10708 13182 . - 0 ID=cds-WP_011882717.1;Parent=gene-LDO38_RS05945;Dbxref=GenBank:WP_011882717.1;Name=WP_011882717.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906825.1;locus_tag=LDO38_RS05945;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_011882717.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 13376 14482 . - . ID=gene-LDO38_RS05950;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=LDO38_RS05950;old_locus_tag=BVI2075_160012 NZ_CAJZAL010000068.1 Protein Homology CDS 13376 14482 . - 0 ID=cds-WP_011882716.1;Parent=gene-LDO38_RS05950;Dbxref=GenBank:WP_011882716.1;Name=WP_011882716.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906826.1;locus_tag=LDO38_RS05950;product=DNA polymerase III subunit beta;protein_id=WP_011882716.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 14651 16228 . - . ID=gene-LDO38_RS05955;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=LDO38_RS05955;old_locus_tag=BVI2075_160013 NZ_CAJZAL010000068.1 Protein Homology CDS 14651 16228 . - 0 ID=cds-WP_011882715.1;Parent=gene-LDO38_RS05955;Dbxref=GenBank:WP_011882715.1;Name=WP_011882715.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401751.1;locus_tag=LDO38_RS05955;product=chromosomal replication initiator protein DnaA;protein_id=WP_011882715.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 16650 16784 . + . ID=gene-LDO38_RS05960;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=LDO38_RS05960;old_locus_tag=BVI2075_160014 NZ_CAJZAL010000068.1 Protein Homology CDS 16650 16784 . + 0 ID=cds-WP_004198824.1;Parent=gene-LDO38_RS05960;Dbxref=GenBank:WP_004198824.1;Name=WP_004198824.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003816025.1;locus_tag=LDO38_RS05960;product=50S ribosomal protein L34;protein_id=WP_004198824.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 16800 17261 . + . ID=gene-LDO38_RS05965;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=LDO38_RS05965;old_locus_tag=BVI2075_160015 NZ_CAJZAL010000068.1 Protein Homology CDS 16800 17261 . + 0 ID=cds-WP_059462170.1;Parent=gene-LDO38_RS05965;Dbxref=GenBank:WP_059462170.1;Name=WP_059462170.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658267.1;locus_tag=LDO38_RS05965;product=ribonuclease P protein component;protein_id=WP_059462170.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 17337 17603 . + . ID=gene-LDO38_RS05970;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=LDO38_RS05970;old_locus_tag=BVI2075_160016 NZ_CAJZAL010000068.1 Protein Homology CDS 17337 17603 . + 0 ID=cds-WP_011886457.1;Parent=gene-LDO38_RS05970;Dbxref=GenBank:WP_011886457.1;Name=WP_011886457.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489939.1;locus_tag=LDO38_RS05970;product=membrane protein insertion efficiency factor YidD;protein_id=WP_011886457.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 17612 19273 . + . ID=gene-LDO38_RS05975;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=LDO38_RS05975;old_locus_tag=BVI2075_160017 NZ_CAJZAL010000068.1 Protein Homology CDS 17612 19273 . + 0 ID=cds-WP_059462171.1;Parent=gene-LDO38_RS05975;Dbxref=GenBank:WP_059462171.1;Name=WP_059462171.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546513.1;locus_tag=LDO38_RS05975;product=membrane protein insertase YidC;protein_id=WP_059462171.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 19389 19826 . - . ID=gene-LDO38_RS05980;Name=LDO38_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05980;old_locus_tag=BVI2075_160019 NZ_CAJZAL010000068.1 Protein Homology CDS 19389 19826 . - 0 ID=cds-WP_034192444.1;Parent=gene-LDO38_RS05980;Dbxref=GenBank:WP_034192444.1;Name=WP_034192444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886455.1;locus_tag=LDO38_RS05980;product=transcriptional regulator;protein_id=WP_034192444.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 20163 21557 . + . ID=gene-LDO38_RS05985;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=LDO38_RS05985;old_locus_tag=BVI2075_160020 NZ_CAJZAL010000068.1 Protein Homology CDS 20163 21557 . + 0 ID=cds-WP_014723892.1;Parent=gene-LDO38_RS05985;Dbxref=GenBank:WP_014723892.1;Name=WP_014723892.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041491300.1;locus_tag=LDO38_RS05985;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_014723892.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 21650 21772 . - . ID=gene-LDO38_RS30060;Name=LDO38_RS30060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30060;old_locus_tag=BVI2075_160021 NZ_CAJZAL010000068.1 GeneMarkS-2+ CDS 21650 21772 . - 0 ID=cds-WP_256976788.1;Parent=gene-LDO38_RS30060;Dbxref=GenBank:WP_256976788.1;Name=WP_256976788.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30060;product=hypothetical protein;protein_id=WP_256976788.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 21921 23279 . - . ID=gene-LDO38_RS05990;Name=LDO38_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05990;old_locus_tag=BVI2075_160022 NZ_CAJZAL010000068.1 Protein Homology CDS 21921 23279 . - 0 ID=cds-WP_011886452.1;Parent=gene-LDO38_RS05990;Dbxref=GenBank:WP_011886452.1;Name=WP_011886452.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886452.1;locus_tag=LDO38_RS05990;product=sensor domain-containing diguanylate cyclase;protein_id=WP_011886452.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 23392 23640 . - . ID=gene-LDO38_RS05995;Name=LDO38_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS05995;old_locus_tag=BVI2075_160023 NZ_CAJZAL010000068.1 Protein Homology CDS 23392 23640 . - 0 ID=cds-WP_212167570.1;Parent=gene-LDO38_RS05995;Dbxref=GenBank:WP_212167570.1;Name=WP_212167570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489924.1;locus_tag=LDO38_RS05995;product=DUF2795 domain-containing protein;protein_id=WP_212167570.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 23750 23920 . - . ID=gene-LDO38_RS06000;Name=LDO38_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06000;old_locus_tag=BVI2075_160024 NZ_CAJZAL010000068.1 Protein Homology CDS 23750 23920 . - 0 ID=cds-WP_006489933.1;Parent=gene-LDO38_RS06000;Dbxref=GenBank:WP_006489933.1;Name=WP_006489933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010113186.1;locus_tag=LDO38_RS06000;product=hypothetical protein;protein_id=WP_006489933.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 24072 24614 . + . ID=gene-LDO38_RS06005;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=LDO38_RS06005;old_locus_tag=BVI2075_160025 NZ_CAJZAL010000068.1 Protein Homology CDS 24072 24614 . + 0 ID=cds-WP_011886450.1;Parent=gene-LDO38_RS06005;Dbxref=GenBank:WP_011886450.1;Name=WP_011886450.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365023.1;locus_tag=LDO38_RS06005;product=spermidine N1-acetyltransferase;protein_id=WP_011886450.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 25113 25460 . + . ID=gene-LDO38_RS06010;Name=sap1;gbkey=Gene;gene=sap1;gene_biotype=protein_coding;locus_tag=LDO38_RS06010;old_locus_tag=BVI2075_160028 NZ_CAJZAL010000068.1 Protein Homology CDS 25113 25460 . + 0 ID=cds-WP_011886449.1;Parent=gene-LDO38_RS06010;Dbxref=GenBank:WP_011886449.1;Name=WP_011886449.1;gbkey=CDS;gene=sap1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525830.1;locus_tag=LDO38_RS06010;product=surface attachment protein Sap1;protein_id=WP_011886449.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 25638 26192 . + . ID=gene-LDO38_RS06015;Name=LDO38_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06015;old_locus_tag=BVI2075_160029 NZ_CAJZAL010000068.1 Protein Homology CDS 25638 26192 . + 0 ID=cds-WP_014723888.1;Parent=gene-LDO38_RS06015;Dbxref=GenBank:WP_014723888.1;Name=WP_014723888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908298.1;locus_tag=LDO38_RS06015;product=YaeQ family protein;protein_id=WP_014723888.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 26203 26616 . - . ID=gene-LDO38_RS06020;Name=LDO38_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06020;old_locus_tag=BVI2075_160030 NZ_CAJZAL010000068.1 Protein Homology CDS 26203 26616 . - 0 ID=cds-WP_034192448.1;Parent=gene-LDO38_RS06020;Dbxref=GenBank:WP_034192448.1;Name=WP_034192448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214381.1;locus_tag=LDO38_RS06020;product=VOC family protein;protein_id=WP_034192448.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 27043 28134 . + . ID=gene-LDO38_RS06025;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=LDO38_RS06025;old_locus_tag=BVI2075_160032 NZ_CAJZAL010000068.1 Protein Homology CDS 27043 28134 . + 0 ID=cds-WP_014723886.1;Parent=gene-LDO38_RS06025;Dbxref=GenBank:WP_014723886.1;Name=WP_014723886.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477427.1;locus_tag=LDO38_RS06025;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_014723886.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 28131 29129 . + . ID=gene-LDO38_RS06030;Name=LDO38_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06030;old_locus_tag=BVI2075_160033 NZ_CAJZAL010000068.1 Protein Homology CDS 28131 29129 . + 0 ID=cds-WP_059474638.1;Parent=gene-LDO38_RS06030;Dbxref=GenBank:WP_059474638.1;Name=WP_059474638.1;Ontology_term=GO:0006281,GO:0019104,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895662.1;locus_tag=LDO38_RS06030;product=DNA-3-methyladenine glycosylase family protein;protein_id=WP_059474638.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 29686 31299 . + . ID=gene-LDO38_RS06035;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=LDO38_RS06035;old_locus_tag=BVI2075_160034 NZ_CAJZAL010000068.1 Protein Homology CDS 29686 31299 . + 0 ID=cds-WP_059474637.1;Parent=gene-LDO38_RS06035;Dbxref=GenBank:WP_059474637.1;Name=WP_059474637.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009962323.1;locus_tag=LDO38_RS06035;product=glutamate--cysteine ligase;protein_id=WP_059474637.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 31354 31659 . - . ID=gene-LDO38_RS06040;Name=LDO38_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06040;old_locus_tag=BVI2075_160035 NZ_CAJZAL010000068.1 Protein Homology CDS 31354 31659 . - 0 ID=cds-WP_011886443.1;Parent=gene-LDO38_RS06040;Dbxref=GenBank:WP_011886443.1;Name=WP_011886443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477430.1;locus_tag=LDO38_RS06040;product=DUF4148 domain-containing protein;protein_id=WP_011886443.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 31994 33634 . + . ID=gene-LDO38_RS06045;Name=LDO38_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06045;old_locus_tag=BVI2075_160036 NZ_CAJZAL010000068.1 Protein Homology CDS 31994 33634 . + 0 ID=cds-WP_011886442.1;Parent=gene-LDO38_RS06045;Dbxref=GenBank:WP_011886442.1;Name=WP_011886442.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886442.1;locus_tag=LDO38_RS06045;product=L-lactate permease;protein_id=WP_011886442.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq pseudogene 33728 33927 . + . ID=gene-LDO38_RS06050;Name=LDO38_RS06050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS06050;partial=true;pseudo=true;start_range=.,33728 NZ_CAJZAL010000068.1 Protein Homology CDS 33728 33927 . + 0 ID=cds-LDO38_RS06050;Parent=gene-LDO38_RS06050;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407230.1;locus_tag=LDO38_RS06050;partial=true;product=aldehyde dehydrogenase family protein;pseudo=true;start_range=.,33728;transl_table=11 NZ_CAJZAL010000068.1 RefSeq pseudogene 34072 34128 . + . ID=gene-LDO38_RS30155;Name=LDO38_RS30155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30155;partial=true;pseudo=true;start_range=.,34072 NZ_CAJZAL010000068.1 Protein Homology CDS 34072 34128 . + 0 ID=cds-LDO38_RS30155;Parent=gene-LDO38_RS30155;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023134.6;locus_tag=LDO38_RS30155;partial=true;product=CGNR zinc finger domain-containing protein;pseudo=true;start_range=.,34072;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 34151 35200 . - . ID=gene-LDO38_RS06055;Name=LDO38_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06055;old_locus_tag=BVI2075_160037 NZ_CAJZAL010000068.1 Protein Homology CDS 34151 35200 . - 0 ID=cds-WP_059558760.1;Parent=gene-LDO38_RS06055;Dbxref=GenBank:WP_059558760.1;Name=WP_059558760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546491.1;locus_tag=LDO38_RS06055;product=DUF3592 domain-containing protein;protein_id=WP_059558760.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 35550 36788 . + . ID=gene-LDO38_RS06060;Name=LDO38_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06060;old_locus_tag=BVI2075_160038 NZ_CAJZAL010000068.1 Protein Homology CDS 35550 36788 . + 0 ID=cds-WP_224056257.1;Parent=gene-LDO38_RS06060;Dbxref=GenBank:WP_224056257.1;Name=WP_224056257.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012761671.1;locus_tag=LDO38_RS06060;product=tyrosine-type recombinase/integrase;protein_id=WP_224056257.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 36883 36967 . - . ID=gene-LDO38_RS06065;Name=LDO38_RS06065;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS06065;old_locus_tag=BVI2075_TRNA42 NZ_CAJZAL010000068.1 tRNAscan-SE tRNA 36883 36967 . - . ID=rna-LDO38_RS06065;Parent=gene-LDO38_RS06065;anticodon=(pos:complement(36933..36935));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS06065;product=tRNA-Ile NZ_CAJZAL010000068.1 tRNAscan-SE exon 36883 36967 . - . ID=exon-LDO38_RS06065-1;Parent=rna-LDO38_RS06065;anticodon=(pos:complement(36933..36935));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS06065;product=tRNA-Ile NZ_CAJZAL010000068.1 RefSeq gene 37389 37985 . + . ID=gene-LDO38_RS06070;Name=LDO38_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06070;old_locus_tag=BVI2075_160039 NZ_CAJZAL010000068.1 GeneMarkS-2+ CDS 37389 37985 . + 0 ID=cds-WP_224056258.1;Parent=gene-LDO38_RS06070;Dbxref=GenBank:WP_224056258.1;Name=WP_224056258.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS06070;product=hypothetical protein;protein_id=WP_224056258.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 38522 39097 . + . ID=gene-LDO38_RS06075;Name=LDO38_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06075;old_locus_tag=BVI2075_160041 NZ_CAJZAL010000068.1 Protein Homology CDS 38522 39097 . + 0 ID=cds-WP_224056259.1;Parent=gene-LDO38_RS06075;Dbxref=GenBank:WP_224056259.1;Name=WP_224056259.1;Ontology_term=GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440545.1;locus_tag=LDO38_RS06075;product=recombinase family protein;protein_id=WP_224056259.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 39247 39453 . + . ID=gene-LDO38_RS06080;Name=LDO38_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06080;old_locus_tag=BVI2075_160042 NZ_CAJZAL010000068.1 Protein Homology CDS 39247 39453 . + 0 ID=cds-WP_224056260.1;Parent=gene-LDO38_RS06080;Dbxref=GenBank:WP_224056260.1;Name=WP_224056260.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013561.6;locus_tag=LDO38_RS06080;product=ribbon-helix-helix domain-containing protein;protein_id=WP_224056260.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 39446 41581 . + . ID=gene-LDO38_RS06085;Name=LDO38_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06085;old_locus_tag=BVI2075_160043 NZ_CAJZAL010000068.1 Protein Homology CDS 39446 41581 . + 0 ID=cds-WP_224056261.1;Parent=gene-LDO38_RS06085;Dbxref=GenBank:WP_224056261.1;Name=WP_224056261.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553163.1;locus_tag=LDO38_RS06085;product=N-6 DNA methylase;protein_id=WP_224056261.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 41578 42516 . + . ID=gene-LDO38_RS06090;Name=LDO38_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06090;old_locus_tag=BVI2075_160044 NZ_CAJZAL010000068.1 Protein Homology CDS 41578 42516 . + 0 ID=cds-WP_224056262.1;Parent=gene-LDO38_RS06090;Dbxref=GenBank:WP_224056262.1;Name=WP_224056262.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: protein motif:HMM:NF013704.7;locus_tag=LDO38_RS06090;product=site-specific DNA-methyltransferase;protein_id=WP_224056262.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 42466 43614 . - . ID=gene-LDO38_RS06095;Name=LDO38_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06095;old_locus_tag=BVI2075_160045 NZ_CAJZAL010000068.1 Protein Homology CDS 42466 43614 . - 0 ID=cds-WP_224056263.1;Parent=gene-LDO38_RS06095;Dbxref=GenBank:WP_224056263.1;Name=WP_224056263.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024491.6;locus_tag=LDO38_RS06095;product=phospholipase D-like domain-containing protein;protein_id=WP_224056263.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 44341 46539 . + . ID=gene-LDO38_RS06100;Name=LDO38_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06100;old_locus_tag=BVI2075_160047 NZ_CAJZAL010000068.1 Protein Homology CDS 44341 46539 . + 0 ID=cds-WP_224056264.1;Parent=gene-LDO38_RS06100;Dbxref=GenBank:WP_224056264.1;Name=WP_224056264.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF012234.6;locus_tag=LDO38_RS06100;product=AAA family ATPase;protein_id=WP_224056264.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 46520 47875 . + . ID=gene-LDO38_RS06105;Name=LDO38_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06105;old_locus_tag=BVI2075_160048 NZ_CAJZAL010000068.1 Protein Homology CDS 46520 47875 . + 0 ID=cds-WP_224056265.1;Parent=gene-LDO38_RS06105;Dbxref=GenBank:WP_224056265.1;Name=WP_224056265.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021622.6;locus_tag=LDO38_RS06105;product=McrC family protein;protein_id=WP_224056265.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 48505 48798 . + . ID=gene-LDO38_RS06110;Name=LDO38_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06110;old_locus_tag=BVI2075_160052 NZ_CAJZAL010000068.1 Protein Homology CDS 48505 48798 . + 0 ID=cds-WP_224056266.1;Parent=gene-LDO38_RS06110;Dbxref=GenBank:WP_224056266.1;Name=WP_224056266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553164.1;locus_tag=LDO38_RS06110;product=hypothetical protein;protein_id=WP_224056266.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 48798 49448 . + . ID=gene-LDO38_RS06115;Name=LDO38_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06115;old_locus_tag=BVI2075_160053 NZ_CAJZAL010000068.1 Protein Homology CDS 48798 49448 . + 0 ID=cds-WP_224056267.1;Parent=gene-LDO38_RS06115;Dbxref=GenBank:WP_224056267.1;Name=WP_224056267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009951456.1;locus_tag=LDO38_RS06115;product=hypothetical protein;protein_id=WP_224056267.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 49499 49750 . - . ID=gene-LDO38_RS06120;Name=LDO38_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06120;old_locus_tag=BVI2075_160054 NZ_CAJZAL010000068.1 Protein Homology CDS 49499 49750 . - 0 ID=cds-WP_126242816.1;Parent=gene-LDO38_RS06120;Dbxref=GenBank:WP_126242816.1;Name=WP_126242816.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009951454.1;locus_tag=LDO38_RS06120;product=helix-turn-helix domain-containing protein;protein_id=WP_126242816.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 49985 50560 . + . ID=gene-LDO38_RS06125;Name=LDO38_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06125;old_locus_tag=BVI2075_160055 NZ_CAJZAL010000068.1 Protein Homology CDS 49985 50560 . + 0 ID=cds-WP_224056268.1;Parent=gene-LDO38_RS06125;Dbxref=GenBank:WP_224056268.1;Name=WP_224056268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004547952.1;locus_tag=LDO38_RS06125;product=hypothetical protein;protein_id=WP_224056268.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 50660 51385 . + . ID=gene-LDO38_RS06130;Name=LDO38_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06130;old_locus_tag=BVI2075_160056 NZ_CAJZAL010000068.1 GeneMarkS-2+ CDS 50660 51385 . + 0 ID=cds-WP_224056269.1;Parent=gene-LDO38_RS06130;Dbxref=GenBank:WP_224056269.1;Name=WP_224056269.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS06130;product=hypothetical protein;protein_id=WP_224056269.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 51585 52790 . - . ID=gene-LDO38_RS06135;Name=LDO38_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06135;old_locus_tag=BVI2075_160059 NZ_CAJZAL010000068.1 GeneMarkS-2+ CDS 51585 52790 . - 0 ID=cds-WP_224056270.1;Parent=gene-LDO38_RS06135;Dbxref=GenBank:WP_224056270.1;Name=WP_224056270.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS06135;product=hypothetical protein;protein_id=WP_224056270.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 53186 54214 . - . ID=gene-LDO38_RS06140;Name=LDO38_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06140;old_locus_tag=BVI2075_160060 NZ_CAJZAL010000068.1 GeneMarkS-2+ CDS 53186 54214 . - 0 ID=cds-WP_224056271.1;Parent=gene-LDO38_RS06140;Dbxref=GenBank:WP_224056271.1;Name=WP_224056271.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS06140;product=hypothetical protein;protein_id=WP_224056271.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 54214 54465 . - . ID=gene-LDO38_RS06145;Name=LDO38_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06145;old_locus_tag=BVI2075_160061 NZ_CAJZAL010000068.1 Protein Homology CDS 54214 54465 . - 0 ID=cds-WP_206445469.1;Parent=gene-LDO38_RS06145;Dbxref=GenBank:WP_206445469.1;Name=WP_206445469.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024139.6;locus_tag=LDO38_RS06145;product=helix-turn-helix domain-containing protein;protein_id=WP_206445469.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 54569 55759 . - . ID=gene-LDO38_RS06150;Name=LDO38_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06150;old_locus_tag=BVI2075_160062 NZ_CAJZAL010000068.1 Protein Homology CDS 54569 55759 . - 0 ID=cds-WP_224056272.1;Parent=gene-LDO38_RS06150;Dbxref=GenBank:WP_224056272.1;Name=WP_224056272.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040446.5;locus_tag=LDO38_RS06150;product=transcriptional regulator domain-containing protein;protein_id=WP_224056272.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 55870 55945 . - . ID=gene-LDO38_RS06155;Name=LDO38_RS06155;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS06155;old_locus_tag=BVI2075_TRNA41 NZ_CAJZAL010000068.1 tRNAscan-SE tRNA 55870 55945 . - . ID=rna-LDO38_RS06155;Parent=gene-LDO38_RS06155;anticodon=(pos:complement(55910..55912));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS06155;product=tRNA-Lys NZ_CAJZAL010000068.1 tRNAscan-SE exon 55870 55945 . - . ID=exon-LDO38_RS06155-1;Parent=rna-LDO38_RS06155;anticodon=(pos:complement(55910..55912));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS06155;product=tRNA-Lys NZ_CAJZAL010000068.1 RefSeq gene 56135 56539 . + . ID=gene-LDO38_RS06160;Name=LDO38_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06160;old_locus_tag=BVI2075_160063 NZ_CAJZAL010000068.1 Protein Homology CDS 56135 56539 . + 0 ID=cds-WP_011886440.1;Parent=gene-LDO38_RS06160;Dbxref=GenBank:WP_011886440.1;Name=WP_011886440.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877330.1;locus_tag=LDO38_RS06160;product=PaaI family thioesterase;protein_id=WP_011886440.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 56548 57414 . + . ID=gene-LDO38_RS06165;Name=LDO38_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06165;old_locus_tag=BVI2075_160064 NZ_CAJZAL010000068.1 Protein Homology CDS 56548 57414 . + 0 ID=cds-WP_011886439.1;Parent=gene-LDO38_RS06165;Dbxref=GenBank:WP_011886439.1;Name=WP_011886439.1;Ontology_term=GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407226.1;locus_tag=LDO38_RS06165;product=patatin-like phospholipase family protein;protein_id=WP_011886439.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 57462 58475 . - . ID=gene-LDO38_RS06170;Name=LDO38_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06170;old_locus_tag=BVI2075_160065 NZ_CAJZAL010000068.1 Protein Homology CDS 57462 58475 . - 0 ID=cds-WP_034192453.1;Parent=gene-LDO38_RS06170;Dbxref=GenBank:WP_034192453.1;Name=WP_034192453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090305.1;locus_tag=LDO38_RS06170;product=D-2-hydroxyacid dehydrogenase family protein;protein_id=WP_034192453.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 58876 59925 . + . ID=gene-LDO38_RS06175;Name=LDO38_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06175;old_locus_tag=BVI2075_160067 NZ_CAJZAL010000068.1 Protein Homology CDS 58876 59925 . + 0 ID=cds-WP_011886437.1;Parent=gene-LDO38_RS06175;Dbxref=GenBank:WP_011886437.1;Name=WP_011886437.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893648.1;locus_tag=LDO38_RS06175;product=LysR family transcriptional regulator;protein_id=WP_011886437.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 60042 62639 . - . ID=gene-LDO38_RS06180;Name=LDO38_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06180;old_locus_tag=BVI2075_160068 NZ_CAJZAL010000068.1 Protein Homology CDS 60042 62639 . - 0 ID=cds-WP_011886436.1;Parent=gene-LDO38_RS06180;Dbxref=GenBank:WP_011886436.1;Name=WP_011886436.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009902112.1;locus_tag=LDO38_RS06180;product=DNA topoisomerase III;protein_id=WP_011886436.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 62832 63212 . - . ID=gene-LDO38_RS06185;Name=LDO38_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06185;old_locus_tag=BVI2075_160070 NZ_CAJZAL010000068.1 Protein Homology CDS 62832 63212 . - 0 ID=cds-WP_011886435.1;Parent=gene-LDO38_RS06185;Dbxref=GenBank:WP_011886435.1;Name=WP_011886435.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477457.1;locus_tag=LDO38_RS06185;product=thioredoxin family protein;protein_id=WP_011886435.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 63249 64598 . - . ID=gene-LDO38_RS06190;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=LDO38_RS06190;old_locus_tag=BVI2075_160071 NZ_CAJZAL010000068.1 Protein Homology CDS 63249 64598 . - 0 ID=cds-WP_059474634.1;Parent=gene-LDO38_RS06190;Dbxref=GenBank:WP_059474634.1;Name=WP_059474634.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723871.1;locus_tag=LDO38_RS06190;product=DNA-processing protein DprA;protein_id=WP_059474634.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 64784 65287 . + . ID=gene-LDO38_RS06195;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=LDO38_RS06195;old_locus_tag=BVI2075_160073 NZ_CAJZAL010000068.1 Protein Homology CDS 64784 65287 . + 0 ID=cds-WP_011886433.1;Parent=gene-LDO38_RS06195;Dbxref=GenBank:WP_011886433.1;Name=WP_011886433.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100727.1;locus_tag=LDO38_RS06195;product=peptide deformylase;protein_id=WP_011886433.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 65320 66303 . + . ID=gene-LDO38_RS06200;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=LDO38_RS06200;old_locus_tag=BVI2075_160072 NZ_CAJZAL010000068.1 Protein Homology CDS 65320 66303 . + 0 ID=cds-WP_059474633.1;Parent=gene-LDO38_RS06200;Dbxref=GenBank:WP_059474633.1;Name=WP_059474633.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100729.1;locus_tag=LDO38_RS06200;product=methionyl-tRNA formyltransferase;protein_id=WP_059474633.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 66414 67055 . + . ID=gene-LDO38_RS06205;Name=LDO38_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06205;old_locus_tag=BVI2075_160075 NZ_CAJZAL010000068.1 Protein Homology CDS 66414 67055 . + 0 ID=cds-WP_059463418.1;Parent=gene-LDO38_RS06205;Dbxref=GenBank:WP_059463418.1;Name=WP_059463418.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414433.1;locus_tag=LDO38_RS06205;product=LysE family translocator;protein_id=WP_059463418.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 67154 68011 . + . ID=gene-LDO38_RS06210;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=LDO38_RS06210;old_locus_tag=BVI2075_160076 NZ_CAJZAL010000068.1 Protein Homology CDS 67154 68011 . + 0 ID=cds-WP_011886430.1;Parent=gene-LDO38_RS06210;Dbxref=GenBank:WP_011886430.1;Name=WP_011886430.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007581962.1;locus_tag=LDO38_RS06210;product=zinc metalloprotease HtpX;protein_id=WP_011886430.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 68227 69615 . + . ID=gene-LDO38_RS06215;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=LDO38_RS06215;old_locus_tag=BVI2075_160077 NZ_CAJZAL010000068.1 Protein Homology CDS 68227 69615 . + 0 ID=cds-WP_034192454.1;Parent=gene-LDO38_RS06215;Dbxref=GenBank:WP_034192454.1;Name=WP_034192454.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750072.1;locus_tag=LDO38_RS06215;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_034192454.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 69612 70202 . + . ID=gene-LDO38_RS06220;Name=LDO38_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06220;old_locus_tag=BVI2075_160078 NZ_CAJZAL010000068.1 Protein Homology CDS 69612 70202 . + 0 ID=cds-WP_011886428.1;Parent=gene-LDO38_RS06220;Dbxref=GenBank:WP_011886428.1;Name=WP_011886428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553747.1;locus_tag=LDO38_RS06220;product=DUF4390 domain-containing protein;protein_id=WP_011886428.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 70192 72606 . + . ID=gene-LDO38_RS06225;Name=esaS;gbkey=Gene;gene=esaS;gene_biotype=protein_coding;locus_tag=LDO38_RS06225;old_locus_tag=BVI2075_160079 NZ_CAJZAL010000068.1 Protein Homology CDS 70192 72606 . + 0 ID=cds-WP_059463417.1;Parent=gene-LDO38_RS06225;Dbxref=GenBank:WP_059463417.1;Name=WP_059463417.1;Note=Enhanced Sensitivity to Antibiotics Sensor;gbkey=CDS;gene=esaS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353567.1;locus_tag=LDO38_RS06225;product=sensor histidine kinase EsaS;protein_id=WP_059463417.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 72607 73308 . + . ID=gene-LDO38_RS06230;Name=esaR;gbkey=Gene;gene=esaR;gene_biotype=protein_coding;locus_tag=LDO38_RS06230;old_locus_tag=BVI2075_160080 NZ_CAJZAL010000068.1 Protein Homology CDS 72607 73308 . + 0 ID=cds-WP_014723864.1;Parent=gene-LDO38_RS06230;Dbxref=GenBank:WP_014723864.1;Name=WP_014723864.1;gbkey=CDS;gene=esaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009935896.1;locus_tag=LDO38_RS06230;product=response regulator transcription factor EsaR;protein_id=WP_014723864.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 73370 73445 . + . ID=gene-LDO38_RS06235;Name=LDO38_RS06235;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS06235;old_locus_tag=BVI2075_TRNA2 NZ_CAJZAL010000068.1 tRNAscan-SE tRNA 73370 73445 . + . ID=rna-LDO38_RS06235;Parent=gene-LDO38_RS06235;anticodon=(pos:73403..73405);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS06235;product=tRNA-Phe NZ_CAJZAL010000068.1 tRNAscan-SE exon 73370 73445 . + . ID=exon-LDO38_RS06235-1;Parent=rna-LDO38_RS06235;anticodon=(pos:73403..73405);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS06235;product=tRNA-Phe NZ_CAJZAL010000068.1 RefSeq gene 73797 74531 . + . ID=gene-LDO38_RS06240;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=LDO38_RS06240;old_locus_tag=BVI2075_160082 NZ_CAJZAL010000068.1 Protein Homology CDS 73797 74531 . + 0 ID=cds-WP_011886353.1;Parent=gene-LDO38_RS06240;Dbxref=GenBank:WP_011886353.1;Name=WP_011886353.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407218.1;locus_tag=LDO38_RS06240;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_011886353.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 74607 75239 . + . ID=gene-LDO38_RS06245;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=LDO38_RS06245;old_locus_tag=BVI2075_160083 NZ_CAJZAL010000068.1 Protein Homology CDS 74607 75239 . + 0 ID=cds-WP_011886352.1;Parent=gene-LDO38_RS06245;Dbxref=GenBank:WP_011886352.1;Name=WP_011886352.1;Ontology_term=GO:0006400,GO:0008616,GO:0046872,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007733358.1;locus_tag=LDO38_RS06245;product=7-carboxy-7-deazaguanine synthase;protein_id=WP_011886352.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 75258 75710 . + . ID=gene-LDO38_RS06250;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=LDO38_RS06250;old_locus_tag=BVI2075_160084 NZ_CAJZAL010000068.1 Protein Homology CDS 75258 75710 . + 0 ID=cds-WP_011886351.1;Parent=gene-LDO38_RS06250;Dbxref=GenBank:WP_011886351.1;Name=WP_011886351.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482561.1;locus_tag=LDO38_RS06250;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_011886351.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 76039 76824 . + . ID=gene-LDO38_RS06255;Name=LDO38_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06255;old_locus_tag=BVI2075_160086 NZ_CAJZAL010000068.1 Protein Homology CDS 76039 76824 . + 0 ID=cds-WP_011886350.1;Parent=gene-LDO38_RS06255;Dbxref=GenBank:WP_011886350.1;Name=WP_011886350.1;Ontology_term=GO:0016830,GO:0046872;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334622.1;locus_tag=LDO38_RS06255;product=HpcH/HpaI aldolase family protein;protein_id=WP_011886350.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 76959 77675 . + . ID=gene-LDO38_RS06260;Name=LDO38_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06260;old_locus_tag=BVI2075_160087 NZ_CAJZAL010000068.1 Protein Homology CDS 76959 77675 . + 0 ID=cds-WP_059462196.1;Parent=gene-LDO38_RS06260;Dbxref=GenBank:WP_059462196.1;Name=WP_059462196.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723863.1;locus_tag=LDO38_RS06260;product=tetratricopeptide repeat protein;protein_id=WP_059462196.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 77775 78923 . - . ID=gene-LDO38_RS06265;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=LDO38_RS06265;old_locus_tag=BVI2075_160088 NZ_CAJZAL010000068.1 Protein Homology CDS 77775 78923 . - 0 ID=cds-WP_011886348.1;Parent=gene-LDO38_RS06265;Dbxref=GenBank:WP_011886348.1;Name=WP_011886348.1;Ontology_term=GO:0008360,GO:0016020;gbkey=CDS;gene=rodA;go_component=membrane|0016020||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525857.1;locus_tag=LDO38_RS06265;product=rod shape-determining protein RodA;protein_id=WP_011886348.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 78935 81214 . - . ID=gene-LDO38_RS06270;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=LDO38_RS06270;old_locus_tag=BVI2075_160089 NZ_CAJZAL010000068.1 Protein Homology CDS 78935 81214 . - 0 ID=cds-WP_069246363.1;Parent=gene-LDO38_RS06270;Dbxref=GenBank:WP_069246363.1;Name=WP_069246363.1;Ontology_term=GO:0009252,GO:0003824,GO:0008658,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=catalytic activity|0003824||IEA,penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214361.1;locus_tag=LDO38_RS06270;product=penicillin-binding protein 2;protein_id=WP_069246363.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 81325 81837 . - . ID=gene-LDO38_RS06275;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=LDO38_RS06275;old_locus_tag=BVI2075_160090 NZ_CAJZAL010000068.1 Protein Homology CDS 81325 81837 . - 0 ID=cds-WP_011886346.1;Parent=gene-LDO38_RS06275;Dbxref=GenBank:WP_011886346.1;Name=WP_011886346.1;Ontology_term=GO:0008360,GO:0016020;gbkey=CDS;gene=mreD;go_component=membrane|0016020||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189260.1;locus_tag=LDO38_RS06275;product=rod shape-determining protein MreD;protein_id=WP_011886346.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 81834 82862 . - . ID=gene-LDO38_RS06280;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=LDO38_RS06280;old_locus_tag=BVI2075_160091 NZ_CAJZAL010000068.1 Protein Homology CDS 81834 82862 . - 0 ID=cds-WP_045578685.1;Parent=gene-LDO38_RS06280;Dbxref=GenBank:WP_045578685.1;Name=WP_045578685.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546475.1;locus_tag=LDO38_RS06280;product=rod shape-determining protein MreC;protein_id=WP_045578685.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 83002 84045 . - . ID=gene-LDO38_RS06285;Name=LDO38_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06285;old_locus_tag=BVI2075_160092 NZ_CAJZAL010000068.1 Protein Homology CDS 83002 84045 . - 0 ID=cds-WP_004189550.1;Parent=gene-LDO38_RS06285;Dbxref=GenBank:WP_004189550.1;Name=WP_004189550.1;Ontology_term=GO:0000902,GO:0008360,GO:0005524,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA;go_process=cell morphogenesis|0000902||IEA,regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004628293.1;locus_tag=LDO38_RS06285;product=rod shape-determining protein;protein_id=WP_004189550.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 84413 84712 . + . ID=gene-LDO38_RS06290;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=LDO38_RS06290;old_locus_tag=BVI2075_160093 NZ_CAJZAL010000068.1 Protein Homology CDS 84413 84712 . + 0 ID=cds-WP_006407213.1;Parent=gene-LDO38_RS06290;Dbxref=GenBank:WP_006407213.1;Name=WP_006407213.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012399478.1;locus_tag=LDO38_RS06290;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_006407213.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 84781 86271 . + . ID=gene-LDO38_RS06295;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=LDO38_RS06295;old_locus_tag=BVI2075_160094 NZ_CAJZAL010000068.1 Protein Homology CDS 84781 86271 . + 0 ID=cds-WP_011886344.1;Parent=gene-LDO38_RS06295;Dbxref=GenBank:WP_011886344.1;Name=WP_011886344.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494379.1;locus_tag=LDO38_RS06295;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_011886344.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 86276 87748 . + . ID=gene-LDO38_RS06300;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=LDO38_RS06300;old_locus_tag=BVI2075_160095 NZ_CAJZAL010000068.1 Protein Homology CDS 86276 87748 . + 0 ID=cds-WP_011886343.1;Parent=gene-LDO38_RS06300;Dbxref=GenBank:WP_011886343.1;Name=WP_011886343.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190092.1;locus_tag=LDO38_RS06300;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_011886343.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 87874 88713 . + . ID=gene-LDO38_RS06305;Name=LDO38_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06305;old_locus_tag=BVI2075_160096 NZ_CAJZAL010000068.1 Protein Homology CDS 87874 88713 . + 0 ID=cds-WP_011886342.1;Parent=gene-LDO38_RS06305;Dbxref=GenBank:WP_011886342.1;Name=WP_011886342.1;Ontology_term=GO:0006797,GO:0008976,GO:0016776;gbkey=CDS;go_function=polyphosphate kinase activity|0008976||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=polyphosphate metabolic process|0006797||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886342.1;locus_tag=LDO38_RS06305;product=polyphosphate kinase 2 family protein;protein_id=WP_011886342.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 88760 89533 . + . ID=gene-LDO38_RS06310;Name=LDO38_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06310;old_locus_tag=BVI2075_160097 NZ_CAJZAL010000068.1 Protein Homology CDS 88760 89533 . + 0 ID=cds-WP_011886341.1;Parent=gene-LDO38_RS06310;Dbxref=GenBank:WP_011886341.1;Name=WP_011886341.1;Ontology_term=GO:0006281,GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090333.1;locus_tag=LDO38_RS06310;product=exodeoxyribonuclease III;protein_id=WP_011886341.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 89666 90718 . - . ID=gene-LDO38_RS06315;Name=LDO38_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06315;old_locus_tag=BVI2075_160098 NZ_CAJZAL010000068.1 Protein Homology CDS 89666 90718 . - 0 ID=cds-WP_011886340.1;Parent=gene-LDO38_RS06315;Dbxref=GenBank:WP_011886340.1;Name=WP_011886340.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895709.1;locus_tag=LDO38_RS06315;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_011886340.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 90943 91887 . + . ID=gene-LDO38_RS06320;Name=LDO38_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06320;old_locus_tag=BVI2075_160099 NZ_CAJZAL010000068.1 Protein Homology CDS 90943 91887 . + 0 ID=cds-WP_014723857.1;Parent=gene-LDO38_RS06320;Dbxref=GenBank:WP_014723857.1;Name=WP_014723857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886339.1;locus_tag=LDO38_RS06320;product=AraC family transcriptional regulator;protein_id=WP_014723857.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 91928 92965 . - . ID=gene-LDO38_RS06325;Name=LDO38_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06325;old_locus_tag=BVI2075_160100 NZ_CAJZAL010000068.1 Protein Homology CDS 91928 92965 . - 0 ID=cds-WP_069246360.1;Parent=gene-LDO38_RS06325;Dbxref=GenBank:WP_069246360.1;Name=WP_069246360.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546470.1;locus_tag=LDO38_RS06325;product=M48 family metallopeptidase;protein_id=WP_069246360.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 92955 94376 . - . ID=gene-LDO38_RS06330;Name=LDO38_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06330;old_locus_tag=BVI2075_160101 NZ_CAJZAL010000068.1 Protein Homology CDS 92955 94376 . - 0 ID=cds-WP_059463413.1;Parent=gene-LDO38_RS06330;Dbxref=GenBank:WP_059463413.1;Name=WP_059463413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407205.1;locus_tag=LDO38_RS06330;product=AmpG family muropeptide MFS transporter;protein_id=WP_059463413.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 94492 95100 . - . ID=gene-LDO38_RS06335;Name=metW;gbkey=Gene;gene=metW;gene_biotype=protein_coding;locus_tag=LDO38_RS06335;old_locus_tag=BVI2075_160102 NZ_CAJZAL010000068.1 Protein Homology CDS 94492 95100 . - 0 ID=cds-WP_011886336.1;Parent=gene-LDO38_RS06335;Dbxref=GenBank:WP_011886336.1;Name=WP_011886336.1;Ontology_term=GO:0009086;gbkey=CDS;gene=metW;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658215.1;locus_tag=LDO38_RS06335;product=methionine biosynthesis protein MetW;protein_id=WP_011886336.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 95097 96242 . - . ID=gene-LDO38_RS06340;Name=metX;gbkey=Gene;gene=metX;gene_biotype=protein_coding;locus_tag=LDO38_RS06340;old_locus_tag=BVI2075_160103 NZ_CAJZAL010000068.1 Protein Homology CDS 95097 96242 . - 0 ID=cds-WP_011886335.1;Parent=gene-LDO38_RS06340;Dbxref=GenBank:WP_011886335.1;Name=WP_011886335.1;Ontology_term=GO:0009086,GO:0008899;gbkey=CDS;gene=metX;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761998.1;locus_tag=LDO38_RS06340;product=homoserine O-succinyltransferase MetX;protein_id=WP_011886335.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 96501 99491 . - . ID=gene-LDO38_RS06345;Name=LDO38_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06345;old_locus_tag=BVI2075_160104 NZ_CAJZAL010000068.1 Protein Homology CDS 96501 99491 . - 0 ID=cds-WP_069246359.1;Parent=gene-LDO38_RS06345;Dbxref=GenBank:WP_069246359.1;Name=WP_069246359.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886334.1;locus_tag=LDO38_RS06345;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_069246359.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 99768 100439 . - . ID=gene-LDO38_RS06350;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=LDO38_RS06350;old_locus_tag=BVI2075_160105 NZ_CAJZAL010000068.1 Protein Homology CDS 99768 100439 . - 0 ID=cds-WP_034192462.1;Parent=gene-LDO38_RS06350;Dbxref=GenBank:WP_034192462.1;Name=WP_034192462.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004548171.1;locus_tag=LDO38_RS06350;product=nucleoid occlusion factor SlmA;protein_id=WP_034192462.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 100406 101197 . - . ID=gene-LDO38_RS06355;Name=LDO38_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06355;old_locus_tag=BVI2075_160106 NZ_CAJZAL010000068.1 Protein Homology CDS 100406 101197 . - 0 ID=cds-WP_011886332.1;Parent=gene-LDO38_RS06355;Dbxref=GenBank:WP_011886332.1;Name=WP_011886332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329425.1;locus_tag=LDO38_RS06355;product=pyrimidine 5'-nucleotidase;protein_id=WP_011886332.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 101194 102093 . - . ID=gene-LDO38_RS06360;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=LDO38_RS06360;old_locus_tag=BVI2075_160107 NZ_CAJZAL010000068.1 Protein Homology CDS 101194 102093 . - 0 ID=cds-WP_011886331.1;Parent=gene-LDO38_RS06360;Dbxref=GenBank:WP_011886331.1;Name=WP_011886331.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490510.1;locus_tag=LDO38_RS06360;product=acetylglutamate kinase;protein_id=WP_011886331.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 102376 102600 . + . ID=gene-LDO38_RS06365;Name=LDO38_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06365 NZ_CAJZAL010000068.1 Protein Homology CDS 102376 102600 . + 0 ID=cds-WP_011886330.1;Parent=gene-LDO38_RS06365;Dbxref=GenBank:WP_011886330.1;Name=WP_011886330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723852.1;locus_tag=LDO38_RS06365;product=cysteine-rich CWC family protein;protein_id=WP_011886330.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 102699 104102 . + . ID=gene-LDO38_RS06370;Name=LDO38_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06370;old_locus_tag=BVI2075_160109 NZ_CAJZAL010000068.1 Protein Homology CDS 102699 104102 . + 0 ID=cds-WP_034192463.1;Parent=gene-LDO38_RS06370;Dbxref=GenBank:WP_034192463.1;Name=WP_034192463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886329.1;locus_tag=LDO38_RS06370;product=ATP-binding protein;protein_id=WP_034192463.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 104099 104641 . + . ID=gene-LDO38_RS06375;Name=LDO38_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06375;old_locus_tag=BVI2075_160108 NZ_CAJZAL010000068.1 Protein Homology CDS 104099 104641 . + 0 ID=cds-WP_011886328.1;Parent=gene-LDO38_RS06375;Dbxref=GenBank:WP_011886328.1;Name=WP_011886328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334600.1;locus_tag=LDO38_RS06375;product=response regulator transcription factor;protein_id=WP_011886328.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 104769 106112 . - . ID=gene-LDO38_RS06380;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=LDO38_RS06380;old_locus_tag=BVI2075_160110 NZ_CAJZAL010000068.1 Protein Homology CDS 104769 106112 . - 0 ID=cds-WP_011886327.1;Parent=gene-LDO38_RS06380;Dbxref=GenBank:WP_011886327.1;Name=WP_011886327.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895729.1;locus_tag=LDO38_RS06380;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_011886327.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 106123 106659 . - . ID=gene-LDO38_RS06385;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=LDO38_RS06385;old_locus_tag=BVI2075_160111 NZ_CAJZAL010000068.1 Protein Homology CDS 106123 106659 . - 0 ID=cds-WP_011886326.1;Parent=gene-LDO38_RS06385;Dbxref=GenBank:WP_011886326.1;Name=WP_011886326.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760749.1;locus_tag=LDO38_RS06385;product=ATP-dependent protease subunit HslV;protein_id=WP_011886326.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 106893 107309 . - . ID=gene-LDO38_RS06390;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=LDO38_RS06390;old_locus_tag=BVI2075_160113 NZ_CAJZAL010000068.1 Protein Homology CDS 106893 107309 . - 0 ID=cds-WP_006477498.1;Parent=gene-LDO38_RS06390;Dbxref=GenBank:WP_006477498.1;Name=WP_006477498.1;Ontology_term=GO:0006355,GO:0008270,GO:0019899;gbkey=CDS;gene=dksA;go_function=zinc ion binding|0008270||IEA,enzyme binding|0019899||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100883.1;locus_tag=LDO38_RS06390;product=RNA polymerase-binding protein DksA;protein_id=WP_006477498.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 107775 108842 . - . ID=gene-LDO38_RS06395;Name=LDO38_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06395;old_locus_tag=BVI2075_160114 NZ_CAJZAL010000068.1 Protein Homology CDS 107775 108842 . - 0 ID=cds-WP_069246358.1;Parent=gene-LDO38_RS06395;Dbxref=GenBank:WP_069246358.1;Name=WP_069246358.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414099.1;locus_tag=LDO38_RS06395;product=CobW family GTP-binding protein;protein_id=WP_069246358.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 109044 110270 . - . ID=gene-LDO38_RS06400;Name=LDO38_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06400;old_locus_tag=BVI2075_160116 NZ_CAJZAL010000068.1 Protein Homology CDS 109044 110270 . - 0 ID=cds-WP_011886324.1;Parent=gene-LDO38_RS06400;Dbxref=GenBank:WP_011886324.1;Name=WP_011886324.1;Ontology_term=GO:0006364,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895731.1;locus_tag=LDO38_RS06400;product=class I SAM-dependent rRNA methyltransferase;protein_id=WP_011886324.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 110344 111264 . - . ID=gene-LDO38_RS06405;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=LDO38_RS06405;old_locus_tag=BVI2075_160117 NZ_CAJZAL010000068.1 Protein Homology CDS 110344 111264 . - 0 ID=cds-WP_046423626.1;Parent=gene-LDO38_RS06405;Dbxref=GenBank:WP_046423626.1;Name=WP_046423626.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895732.1;locus_tag=LDO38_RS06405;product=tyrosine recombinase XerC;protein_id=WP_046423626.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 111275 112009 . - . ID=gene-LDO38_RS06410;Name=LDO38_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06410;old_locus_tag=BVI2075_160118 NZ_CAJZAL010000068.1 Protein Homology CDS 111275 112009 . - 0 ID=cds-WP_011886322.1;Parent=gene-LDO38_RS06410;Dbxref=GenBank:WP_011886322.1;Name=WP_011886322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895733.1;locus_tag=LDO38_RS06410;product=DUF484 family protein;protein_id=WP_011886322.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 112047 112916 . - . ID=gene-LDO38_RS06415;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=LDO38_RS06415;old_locus_tag=BVI2075_160119 NZ_CAJZAL010000068.1 Protein Homology CDS 112047 112916 . - 0 ID=cds-WP_011886321.1;Parent=gene-LDO38_RS06415;Dbxref=GenBank:WP_011886321.1;Name=WP_011886321.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886321.1;locus_tag=LDO38_RS06415;product=diaminopimelate epimerase;protein_id=WP_011886321.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 113132 114055 . - . ID=gene-LDO38_RS06420;Name=lpxL;gbkey=Gene;gene=lpxL;gene_biotype=protein_coding;locus_tag=LDO38_RS06420;old_locus_tag=BVI2075_160120 NZ_CAJZAL010000068.1 Protein Homology CDS 113132 114055 . - 0 ID=cds-WP_258366898.1;Parent=gene-LDO38_RS06420;Dbxref=GenBank:WP_258366898.1;Name=WP_258366898.1;gbkey=CDS;gene=lpxL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482982.1;locus_tag=LDO38_RS06420;product=lauroyl acyltransferase LpxL;protein_id=WP_258366898.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 114282 115469 . + . ID=gene-LDO38_RS06425;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=LDO38_RS06425;old_locus_tag=BVI2075_160121 NZ_CAJZAL010000068.1 Protein Homology CDS 114282 115469 . + 0 ID=cds-WP_011886319.1;Parent=gene-LDO38_RS06425;Dbxref=GenBank:WP_011886319.1;Name=WP_011886319.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024140.1;locus_tag=LDO38_RS06425;product=methionine adenosyltransferase;protein_id=WP_011886319.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 115577 115918 . - . ID=gene-LDO38_RS06430;Name=LDO38_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06430;old_locus_tag=BVI2075_160122 NZ_CAJZAL010000068.1 Protein Homology CDS 115577 115918 . - 0 ID=cds-WP_011886318.1;Parent=gene-LDO38_RS06430;Dbxref=GenBank:WP_011886318.1;Name=WP_011886318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886318.1;locus_tag=LDO38_RS06430;product=hypothetical protein;protein_id=WP_011886318.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 116271 117044 . + . ID=gene-LDO38_RS06435;Name=LDO38_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06435;old_locus_tag=BVI2075_160123 NZ_CAJZAL010000068.1 Protein Homology CDS 116271 117044 . + 0 ID=cds-WP_011886317.1;Parent=gene-LDO38_RS06435;Dbxref=GenBank:WP_011886317.1;Name=WP_011886317.1;Ontology_term=GO:0046872,GO:0051213;gbkey=CDS;go_function=metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364943.1;locus_tag=LDO38_RS06435;product=phytanoyl-CoA dioxygenase family protein;protein_id=WP_011886317.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 117198 117404 . - . ID=gene-LDO38_RS06440;Name=LDO38_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06440;old_locus_tag=BVI2075_160124 NZ_CAJZAL010000068.1 Protein Homology CDS 117198 117404 . - 0 ID=cds-WP_011886316.1;Parent=gene-LDO38_RS06440;Dbxref=GenBank:WP_011886316.1;Name=WP_011886316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024143.1;locus_tag=LDO38_RS06440;product=DUF3185 family protein;protein_id=WP_011886316.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 117589 118632 . + . ID=gene-LDO38_RS06445;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=LDO38_RS06445;old_locus_tag=BVI2075_160125 NZ_CAJZAL010000068.1 Protein Homology CDS 117589 118632 . + 0 ID=cds-WP_059890095.1;Parent=gene-LDO38_RS06445;Dbxref=GenBank:WP_059890095.1;Name=WP_059890095.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008923385.1;locus_tag=LDO38_RS06445;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_059890095.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 118767 118952 . - . ID=gene-LDO38_RS06450;Name=LDO38_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06450;old_locus_tag=BVI2075_160126 NZ_CAJZAL010000068.1 Protein Homology CDS 118767 118952 . - 0 ID=cds-WP_011886314.1;Parent=gene-LDO38_RS06450;Dbxref=GenBank:WP_011886314.1;Name=WP_011886314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100910.1;locus_tag=LDO38_RS06450;product=hypothetical protein;protein_id=WP_011886314.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 119243 120124 . - . ID=gene-LDO38_RS06455;Name=LDO38_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06455;old_locus_tag=BVI2075_160127 NZ_CAJZAL010000068.1 Protein Homology CDS 119243 120124 . - 0 ID=cds-WP_034192469.1;Parent=gene-LDO38_RS06455;Dbxref=GenBank:WP_034192469.1;Name=WP_034192469.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214341.1;locus_tag=LDO38_RS06455;product=DMT family transporter;protein_id=WP_034192469.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 120875 121087 . + . ID=gene-LDO38_RS06460;Name=LDO38_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06460;old_locus_tag=BVI2075_160129 NZ_CAJZAL010000068.1 Protein Homology CDS 120875 121087 . + 0 ID=cds-WP_011886311.1;Parent=gene-LDO38_RS06460;Dbxref=GenBank:WP_011886311.1;Name=WP_011886311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198969.1;locus_tag=LDO38_RS06460;product=hypothetical protein;protein_id=WP_011886311.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 121137 122168 . + . ID=gene-LDO38_RS06465;Name=LDO38_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06465;old_locus_tag=BVI2075_160130 NZ_CAJZAL010000068.1 Protein Homology CDS 121137 122168 . + 0 ID=cds-WP_011886310.1;Parent=gene-LDO38_RS06465;Dbxref=GenBank:WP_011886310.1;Name=WP_011886310.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753012.1;locus_tag=LDO38_RS06465;product=serine/threonine protein kinase;protein_id=WP_011886310.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 122227 123669 . - . ID=gene-LDO38_RS06470;Name=LDO38_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06470;old_locus_tag=BVI2075_160131 NZ_CAJZAL010000068.1 Protein Homology CDS 122227 123669 . - 0 ID=cds-WP_224056273.1;Parent=gene-LDO38_RS06470;Dbxref=GenBank:WP_224056273.1;Name=WP_224056273.1;Ontology_term=GO:0006081,GO:0050269;gbkey=CDS;go_function=coniferyl-aldehyde dehydrogenase [NAD(P)+] activity|0050269||IEA;go_process=aldehyde metabolic process|0006081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100937.1;locus_tag=LDO38_RS06470;product=coniferyl aldehyde dehydrogenase;protein_id=WP_224056273.1;transl_table=11 NZ_CAJZAL010000068.1 RefSeq gene 124390 126030 . + . ID=gene-LDO38_RS06475;Name=LDO38_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06475;old_locus_tag=BVI2075_160132 NZ_CAJZAL010000068.1 Protein Homology CDS 124390 126030 . + 0 ID=cds-WP_069246357.1;Parent=gene-LDO38_RS06475;Dbxref=GenBank:WP_069246357.1;Name=WP_069246357.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329413.1;locus_tag=LDO38_RS06475;product=GMC family oxidoreductase;protein_id=WP_069246357.1;transl_table=11 ##sequence-region NZ_CAJZAL010000069.1 1 980 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000069.1 RefSeq region 1 980 . + . ID=NZ_CAJZAL010000069.1:1..980;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_160 NZ_CAJZAL010000069.1 RefSeq gene 1 170 . - . ID=gene-LDO38_RS30385;Name=LDO38_RS30385;end_range=170,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30385;partial=true;start_range=.,1 NZ_CAJZAL010000069.1 Protein Homology CDS 1 170 . - 0 ID=cds-WP_435520909.1;Parent=gene-LDO38_RS30385;Dbxref=GenBank:WP_435520909.1;Name=WP_435520909.1;end_range=170,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011793521.1;locus_tag=LDO38_RS30385;partial=true;product=elongation factor Tu;protein_id=WP_435520909.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000069.1 RefSeq gene 181 980 . - . ID=gene-LDO38_RS06480;Name=LDO38_RS06480;end_range=980,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06480;old_locus_tag=BVI2075_1600002;partial=true;start_range=.,181 NZ_CAJZAL010000069.1 Protein Homology CDS 181 980 . - 0 ID=cds-WP_226092324.1;Parent=gene-LDO38_RS06480;Dbxref=GenBank:WP_226092324.1;Name=WP_226092324.1;Ontology_term=GO:0006414,GO:0003746,GO:0003924,GO:0005525;end_range=980,.;gbkey=CDS;go_function=translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011299314.1;locus_tag=LDO38_RS06480;partial=true;product=elongation factor Tu;protein_id=WP_226092324.1;start_range=.,181;transl_table=11 ##sequence-region NZ_CAJZAL010000070.1 1 1046 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000070.1 RefSeq region 1 1046 . + . ID=NZ_CAJZAL010000070.1:1..1046;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_161 NZ_CAJZAL010000070.1 RefSeq gene 374 618 . - . ID=gene-LDO38_RS30390;Name=LDO38_RS30390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30390;partial=true;start_range=.,374 NZ_CAJZAL010000070.1 GeneMarkS-2+ CDS 374 618 . - 0 ID=cds-WP_435520910.1;Parent=gene-LDO38_RS30390;Dbxref=GenBank:WP_435520910.1;Name=WP_435520910.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30390;partial=true;product=hypothetical protein;protein_id=WP_435520910.1;start_range=.,374;transl_table=11 NZ_CAJZAL010000070.1 RefSeq gene 839 1046 . + . ID=gene-LDO38_RS06485;Name=LDO38_RS06485;end_range=1046,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06485;partial=true NZ_CAJZAL010000070.1 Protein Homology CDS 839 1046 . + 0 ID=cds-WP_224056275.1;Parent=gene-LDO38_RS06485;Dbxref=GenBank:WP_224056275.1;Name=WP_224056275.1;Ontology_term=GO:0046654,GO:0004146;end_range=1046,.;gbkey=CDS;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897695.1;locus_tag=LDO38_RS06485;partial=true;product=dihydrofolate reductase;protein_id=WP_224056275.1;transl_table=11 ##sequence-region NZ_CAJZAL010000071.1 1 1950 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000071.1 RefSeq region 1 1950 . + . ID=NZ_CAJZAL010000071.1:1..1950;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_162 NZ_CAJZAL010000071.1 RefSeq gene 1 847 . + . ID=gene-LDO38_RS06490;Name=LDO38_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06490;old_locus_tag=BVI2075_1620001;partial=true;start_range=.,1 NZ_CAJZAL010000071.1 Protein Homology CDS 1 847 . + 1 ID=cds-WP_224056276.1;Parent=gene-LDO38_RS06490;Dbxref=GenBank:WP_224056276.1;Name=WP_224056276.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726248.1;locus_tag=LDO38_RS06490;partial=true;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_224056276.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000071.1 RefSeq gene 1095 1950 . + . ID=gene-LDO38_RS06495;Name=LDO38_RS06495;end_range=1950,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06495;partial=true NZ_CAJZAL010000071.1 Protein Homology CDS 1095 1950 . + 0 ID=cds-WP_224056277.1;Parent=gene-LDO38_RS06495;Dbxref=GenBank:WP_224056277.1;Name=WP_224056277.1;end_range=1950,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661033.1;locus_tag=LDO38_RS06495;partial=true;product=AMP-binding protein;protein_id=WP_224056277.1;transl_table=11 ##sequence-region NZ_CAJZAL010000072.1 1 766 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000072.1 RefSeq region 1 766 . + . ID=NZ_CAJZAL010000072.1:1..766;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_163 NZ_CAJZAL010000072.1 RefSeq gene 1 387 . + . ID=gene-LDO38_RS06500;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=LDO38_RS06500;old_locus_tag=BVI2075_1630001;partial=true;start_range=.,1 NZ_CAJZAL010000072.1 Protein Homology CDS 1 387 . + 0 ID=cds-WP_224056278.1;Parent=gene-LDO38_RS06500;Dbxref=GenBank:WP_224056278.1;Name=WP_224056278.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328129.1;locus_tag=LDO38_RS06500;partial=true;product=ribosome maturation factor RimM;protein_id=WP_224056278.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000072.1 RefSeq pseudogene 388 766 . + . ID=gene-LDO38_RS06505;Name=LDO38_RS06505;end_range=766,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS06505;partial=true;pseudo=true NZ_CAJZAL010000072.1 Protein Homology CDS 388 766 . + 0 ID=cds-LDO38_RS06505;Parent=gene-LDO38_RS06505;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=766,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400700.1;locus_tag=LDO38_RS06505;partial=true;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000073.1 1 6014 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000073.1 RefSeq region 1 6014 . + . ID=NZ_CAJZAL010000073.1:1..6014;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_164 NZ_CAJZAL010000073.1 RefSeq gene 1 641 . + . ID=gene-LDO38_RS06510;Name=LDO38_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06510;old_locus_tag=BVI2075_1640001;partial=true;start_range=.,1 NZ_CAJZAL010000073.1 Protein Homology CDS 1 641 . + 2 ID=cds-WP_224056279.1;Parent=gene-LDO38_RS06510;Dbxref=GenBank:WP_224056279.1;Name=WP_224056279.1;Ontology_term=GO:0055085,GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401442.1;locus_tag=LDO38_RS06510;partial=true;product=mechanosensitive ion channel;protein_id=WP_224056279.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000073.1 RefSeq gene 1031 2443 . + . ID=gene-LDO38_RS06515;Name=eat;gbkey=Gene;gene=eat;gene_biotype=protein_coding;locus_tag=LDO38_RS06515;old_locus_tag=BVI2075_1640002 NZ_CAJZAL010000073.1 Protein Homology CDS 1031 2443 . + 0 ID=cds-WP_014722192.1;Parent=gene-LDO38_RS06515;Dbxref=GenBank:WP_014722192.1;Name=WP_014722192.1;Ontology_term=GO:0006865,GO:0015171,GO:0016020;gbkey=CDS;gene=eat;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195858.1;locus_tag=LDO38_RS06515;product=ethanolamine permease;protein_id=WP_014722192.1;transl_table=11 NZ_CAJZAL010000073.1 RefSeq gene 2650 4047 . + . ID=gene-LDO38_RS06520;Name=LDO38_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06520;old_locus_tag=BVI2075_1640005 NZ_CAJZAL010000073.1 Protein Homology CDS 2650 4047 . + 0 ID=cds-WP_034192978.1;Parent=gene-LDO38_RS06520;Dbxref=GenBank:WP_034192978.1;Name=WP_034192978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762947.1;locus_tag=LDO38_RS06520;product=ethanolamine ammonia-lyase subunit EutB;protein_id=WP_034192978.1;transl_table=11 NZ_CAJZAL010000073.1 RefSeq gene 4044 4835 . + . ID=gene-LDO38_RS06525;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=LDO38_RS06525;old_locus_tag=BVI2075_1640004 NZ_CAJZAL010000073.1 Protein Homology CDS 4044 4835 . + 0 ID=cds-WP_011882837.1;Parent=gene-LDO38_RS06525;Dbxref=GenBank:WP_011882837.1;Name=WP_011882837.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882837.1;locus_tag=LDO38_RS06525;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_011882837.1;transl_table=11 NZ_CAJZAL010000073.1 RefSeq gene 4890 5774 . - . ID=gene-LDO38_RS06530;Name=LDO38_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06530;old_locus_tag=BVI2075_1640006 NZ_CAJZAL010000073.1 Protein Homology CDS 4890 5774 . - 0 ID=cds-WP_224056280.1;Parent=gene-LDO38_RS06530;Dbxref=GenBank:WP_224056280.1;Name=WP_224056280.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546777.1;locus_tag=LDO38_RS06530;product=LysR family transcriptional regulator;protein_id=WP_224056280.1;transl_table=11 ##sequence-region NZ_CAJZAL010000074.1 1 3507 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000074.1 RefSeq region 1 3507 . + . ID=NZ_CAJZAL010000074.1:1..3507;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_165 NZ_CAJZAL010000074.1 RefSeq pseudogene 1 137 . + . ID=gene-LDO38_RS06535;Name=LDO38_RS06535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS06535;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000074.1 Protein Homology CDS 1 137 . + 2 ID=cds-LDO38_RS06535;Parent=gene-LDO38_RS06535;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493188.1;locus_tag=LDO38_RS06535;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000074.1 RefSeq gene 179 1102 . + . ID=gene-LDO38_RS06540;Name=LDO38_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06540;old_locus_tag=BVI2075_1650001 NZ_CAJZAL010000074.1 Protein Homology CDS 179 1102 . + 0 ID=cds-WP_176153628.1;Parent=gene-LDO38_RS06540;Dbxref=GenBank:WP_176153628.1;Name=WP_176153628.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410288.1;locus_tag=LDO38_RS06540;product=DMT family transporter;protein_id=WP_176153628.1;transl_table=11 NZ_CAJZAL010000074.1 RefSeq gene 1170 1949 . + . ID=gene-LDO38_RS06545;Name=LDO38_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06545;old_locus_tag=BVI2075_1650002 NZ_CAJZAL010000074.1 Protein Homology CDS 1170 1949 . + 0 ID=cds-WP_034195057.1;Parent=gene-LDO38_RS06545;Dbxref=GenBank:WP_034195057.1;Name=WP_034195057.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497274.1;locus_tag=LDO38_RS06545;product=sensor histidine kinase;protein_id=WP_034195057.1;transl_table=11 NZ_CAJZAL010000074.1 RefSeq gene 2026 3369 . + . ID=gene-LDO38_RS06550;Name=LDO38_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06550;old_locus_tag=BVI2075_1650003 NZ_CAJZAL010000074.1 Protein Homology CDS 2026 3369 . + 0 ID=cds-WP_011881559.1;Parent=gene-LDO38_RS06550;Dbxref=GenBank:WP_011881559.1;Name=WP_011881559.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004546848.1;locus_tag=LDO38_RS06550;product=hemolysin family protein;protein_id=WP_011881559.1;transl_table=11 NZ_CAJZAL010000074.1 RefSeq pseudogene 3392 3507 . + . ID=gene-LDO38_RS06555;Name=LDO38_RS06555;end_range=3507,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS06555;partial=true;pseudo=true NZ_CAJZAL010000074.1 Protein Homology CDS 3392 3507 . + 0 ID=cds-LDO38_RS06555;Parent=gene-LDO38_RS06555;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3507,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404154.1;locus_tag=LDO38_RS06555;partial=true;product=thiamine phosphate synthase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000075.1 1 1305 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000075.1 RefSeq region 1 1305 . + . ID=NZ_CAJZAL010000075.1:1..1305;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_166 NZ_CAJZAL010000075.1 RefSeq gene 82 1302 . + . ID=gene-LDO38_RS06560;Name=LDO38_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06560;old_locus_tag=BVI2075_1660001 NZ_CAJZAL010000075.1 Protein Homology CDS 82 1302 . + 0 ID=cds-WP_014723161.1;Parent=gene-LDO38_RS06560;Dbxref=GenBank:WP_014723161.1;Name=WP_014723161.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011002488.1;locus_tag=LDO38_RS06560;product=ISL3 family transposase;protein_id=WP_014723161.1;transl_table=11 ##sequence-region NZ_CAJZAL010000076.1 1 1767 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000076.1 RefSeq region 1 1767 . + . ID=NZ_CAJZAL010000076.1:1..1767;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_167 NZ_CAJZAL010000076.1 RefSeq pseudogene 1 424 . - . ID=gene-LDO38_RS06565;Name=LDO38_RS06565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS06565;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000076.1 Protein Homology CDS 1 424 . - 0 ID=cds-LDO38_RS06565;Parent=gene-LDO38_RS06565;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881881.1;locus_tag=LDO38_RS06565;partial=true;product=MBL fold metallo-hydrolase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000076.1 RefSeq gene 697 1159 . - . ID=gene-LDO38_RS30395;Name=LDO38_RS30395;end_range=1159,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30395;old_locus_tag=BVI2075_1670002;partial=true NZ_CAJZAL010000076.1 Protein Homology CDS 697 1159 . - 1 ID=cds-WP_435520911.1;Parent=gene-LDO38_RS30395;Dbxref=GenBank:WP_435520911.1;Name=WP_435520911.1;Ontology_term=GO:0006631,GO:0016491,GO:0016616;end_range=1159,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725160.1;locus_tag=LDO38_RS30395;partial=true;product=3-hydroxyacyl-CoA dehydrogenase family protein;protein_id=WP_435520911.1;transl_table=11 NZ_CAJZAL010000076.1 RefSeq pseudogene 1170 1601 . - . ID=gene-LDO38_RS30400;Name=LDO38_RS30400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30400;old_locus_tag=BVI2075_1670004;partial=true;pseudo=true;start_range=.,1170 NZ_CAJZAL010000076.1 Protein Homology CDS 1170 1601 . - 0 ID=cds-LDO38_RS30400;Parent=gene-LDO38_RS30400;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881880.1;locus_tag=LDO38_RS30400;partial=true;product=3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein;pseudo=true;start_range=.,1170;transl_table=11 ##sequence-region NZ_CAJZAL010000077.1 1 5398 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000077.1 RefSeq region 1 5398 . + . ID=NZ_CAJZAL010000077.1:1..5398;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_168 NZ_CAJZAL010000077.1 RefSeq pseudogene 169 312 . + . ID=gene-LDO38_RS06575;Name=LDO38_RS06575;end_range=312,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS06575;partial=true;pseudo=true;start_range=.,169 NZ_CAJZAL010000077.1 Protein Homology CDS 169 312 . + 0 ID=cds-LDO38_RS06575;Parent=gene-LDO38_RS06575;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=312,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012406050.1;locus_tag=LDO38_RS06575;partial=true;product=ABC transporter substrate-binding protein;pseudo=true;start_range=.,169;transl_table=11 NZ_CAJZAL010000077.1 RefSeq gene 969 1121 . - . ID=gene-LDO38_RS06580;Name=LDO38_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06580;old_locus_tag=BVI2075_1680003 NZ_CAJZAL010000077.1 GeneMarkS-2+ CDS 969 1121 . - 0 ID=cds-WP_155625234.1;Parent=gene-LDO38_RS06580;Dbxref=GenBank:WP_155625234.1;Name=WP_155625234.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS06580;product=hypothetical protein;protein_id=WP_155625234.1;transl_table=11 NZ_CAJZAL010000077.1 RefSeq gene 1312 2208 . - . ID=gene-LDO38_RS06585;Name=LDO38_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06585;old_locus_tag=BVI2075_1680004 NZ_CAJZAL010000077.1 GeneMarkS-2+ CDS 1312 2208 . - 0 ID=cds-WP_059475406.1;Parent=gene-LDO38_RS06585;Dbxref=GenBank:WP_059475406.1;Name=WP_059475406.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS06585;product=hypothetical protein;protein_id=WP_059475406.1;transl_table=11 NZ_CAJZAL010000077.1 RefSeq gene 2205 2354 . - . ID=gene-LDO38_RS06590;Name=LDO38_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06590;old_locus_tag=BVI2075_1680005 NZ_CAJZAL010000077.1 GeneMarkS-2+ CDS 2205 2354 . - 0 ID=cds-WP_155625235.1;Parent=gene-LDO38_RS06590;Dbxref=GenBank:WP_155625235.1;Name=WP_155625235.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS06590;product=hypothetical protein;protein_id=WP_155625235.1;transl_table=11 NZ_CAJZAL010000077.1 RefSeq gene 2676 3401 . + . ID=gene-LDO38_RS06595;Name=LDO38_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06595;old_locus_tag=BVI2075_1680006 NZ_CAJZAL010000077.1 Protein Homology CDS 2676 3401 . + 0 ID=cds-WP_059475407.1;Parent=gene-LDO38_RS06595;Dbxref=GenBank:WP_059475407.1;Name=WP_059475407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356422.1;locus_tag=LDO38_RS06595;product=hypothetical protein;protein_id=WP_059475407.1;transl_table=11 NZ_CAJZAL010000077.1 RefSeq gene 3398 3928 . + . ID=gene-LDO38_RS06600;Name=LDO38_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06600;old_locus_tag=BVI2075_1680007 NZ_CAJZAL010000077.1 GeneMarkS-2+ CDS 3398 3928 . + 0 ID=cds-WP_059475408.1;Parent=gene-LDO38_RS06600;Dbxref=GenBank:WP_059475408.1;Name=WP_059475408.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS06600;product=hypothetical protein;protein_id=WP_059475408.1;transl_table=11 NZ_CAJZAL010000077.1 RefSeq gene 4067 4417 . - . ID=gene-LDO38_RS06605;Name=LDO38_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06605 NZ_CAJZAL010000077.1 Protein Homology CDS 4067 4417 . - 0 ID=cds-WP_155625236.1;Parent=gene-LDO38_RS06605;Dbxref=GenBank:WP_155625236.1;Name=WP_155625236.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF038353.1;locus_tag=LDO38_RS06605;product=FxLYD domain-containing protein;protein_id=WP_155625236.1;transl_table=11 ##sequence-region NZ_CAJZAL010000078.1 1 1148 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000078.1 RefSeq region 1 1148 . + . ID=NZ_CAJZAL010000078.1:1..1148;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_169 NZ_CAJZAL010000078.1 RefSeq gene 1 315 . - . ID=gene-LDO38_RS30405;Name=LDO38_RS30405;end_range=315,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30405;partial=true;start_range=.,1 NZ_CAJZAL010000078.1 Protein Homology CDS 1 315 . - 1 ID=cds-WP_435520914.1;Parent=gene-LDO38_RS30405;Dbxref=GenBank:WP_435520914.1;Name=WP_435520914.1;Ontology_term=GO:0006508,GO:0004222;end_range=315,.;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601592.1;locus_tag=LDO38_RS30405;partial=true;product=M48 family metalloprotease;protein_id=WP_435520914.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000078.1 RefSeq pseudogene 326 530 . - . ID=gene-LDO38_RS30410;Name=LDO38_RS30410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30410;old_locus_tag=BVI2075_1690002;partial=true;pseudo=true;start_range=.,326 NZ_CAJZAL010000078.1 Protein Homology CDS 326 530 . - 0 ID=cds-LDO38_RS30410;Parent=gene-LDO38_RS30410;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601592.1;locus_tag=LDO38_RS30410;partial=true;product=M48 family peptidase;pseudo=true;start_range=.,326;transl_table=11 NZ_CAJZAL010000078.1 RefSeq gene 648 842 . + . ID=gene-LDO38_RS30415;Name=LDO38_RS30415;end_range=842,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30415;old_locus_tag=BVI2075_1690003;partial=true NZ_CAJZAL010000078.1 Protein Homology CDS 648 842 . + 0 ID=cds-WP_435520912.1;Parent=gene-LDO38_RS30415;Dbxref=GenBank:WP_435520912.1;Name=WP_435520912.1;Ontology_term=GO:0004527;end_range=842,.;gbkey=CDS;go_function=exonuclease activity|0004527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351365.1;locus_tag=LDO38_RS30415;partial=true;product=exonuclease domain-containing protein;protein_id=WP_435520912.1;transl_table=11 NZ_CAJZAL010000078.1 RefSeq gene 853 1148 . + . ID=gene-LDO38_RS30420;Name=orn;end_range=1148,.;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=LDO38_RS30420;partial=true;start_range=.,853 NZ_CAJZAL010000078.1 Protein Homology CDS 853 1148 . + 2 ID=cds-WP_435520913.1;Parent=gene-LDO38_RS30420;Dbxref=GenBank:WP_435520913.1;Name=WP_435520913.1;Ontology_term=GO:0000175,GO:0003676;end_range=1148,.;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351365.1;locus_tag=LDO38_RS30420;partial=true;product=oligoribonuclease;protein_id=WP_435520913.1;start_range=.,853;transl_table=11 ##sequence-region NZ_CAJZAL010000079.1 1 34810 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000079.1 RefSeq region 1 34810 . + . ID=NZ_CAJZAL010000079.1:1..34810;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_17 NZ_CAJZAL010000079.1 RefSeq gene 1 340 . - . ID=gene-LDO38_RS06620;Name=LDO38_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06620;partial=true;start_range=.,1 NZ_CAJZAL010000079.1 Protein Homology CDS 1 340 . - 0 ID=cds-WP_224056282.1;Parent=gene-LDO38_RS06620;Dbxref=GenBank:WP_224056282.1;Name=WP_224056282.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194189.1;locus_tag=LDO38_RS06620;partial=true;product=RsmE family RNA methyltransferase;protein_id=WP_224056282.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 358 774 . - . ID=gene-LDO38_RS06625;Name=LDO38_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06625;old_locus_tag=BVI2075_170002 NZ_CAJZAL010000079.1 Protein Homology CDS 358 774 . - 0 ID=cds-WP_011883248.1;Parent=gene-LDO38_RS06625;Dbxref=GenBank:WP_011883248.1;Name=WP_011883248.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722433.1;locus_tag=LDO38_RS06625;product=VOC family protein;protein_id=WP_011883248.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 908 1765 . - . ID=gene-LDO38_RS06630;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=LDO38_RS06630;old_locus_tag=BVI2075_170003 NZ_CAJZAL010000079.1 Protein Homology CDS 908 1765 . - 0 ID=cds-WP_011883249.1;Parent=gene-LDO38_RS06630;Dbxref=GenBank:WP_011883249.1;Name=WP_011883249.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496731.1;locus_tag=LDO38_RS06630;product=polyamine aminopropyltransferase;protein_id=WP_011883249.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 1981 4053 . + . ID=gene-LDO38_RS06635;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=LDO38_RS06635;old_locus_tag=BVI2075_170004 NZ_CAJZAL010000079.1 Protein Homology CDS 1981 4053 . + 0 ID=cds-WP_046422606.1;Parent=gene-LDO38_RS06635;Dbxref=GenBank:WP_046422606.1;Name=WP_046422606.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363073.1;locus_tag=LDO38_RS06635;product=transketolase;protein_id=WP_046422606.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 4141 5151 . + . ID=gene-LDO38_RS06640;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=LDO38_RS06640;old_locus_tag=BVI2075_170005 NZ_CAJZAL010000079.1 Protein Homology CDS 4141 5151 . + 0 ID=cds-WP_011883251.1;Parent=gene-LDO38_RS06640;Dbxref=GenBank:WP_011883251.1;Name=WP_011883251.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883251.1;locus_tag=LDO38_RS06640;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_011883251.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 5321 6043 . - . ID=gene-LDO38_RS06645;Name=LDO38_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06645;old_locus_tag=BVI2075_170006 NZ_CAJZAL010000079.1 Protein Homology CDS 5321 6043 . - 0 ID=cds-WP_014722435.1;Parent=gene-LDO38_RS06645;Dbxref=GenBank:WP_014722435.1;Name=WP_014722435.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722435.1;locus_tag=LDO38_RS06645;product=FadR/GntR family transcriptional regulator;protein_id=WP_014722435.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 6256 7578 . + . ID=gene-LDO38_RS06650;Name=LDO38_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06650;old_locus_tag=BVI2075_170007 NZ_CAJZAL010000079.1 Protein Homology CDS 6256 7578 . + 0 ID=cds-WP_011883253.1;Parent=gene-LDO38_RS06650;Dbxref=GenBank:WP_011883253.1;Name=WP_011883253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350923.1;locus_tag=LDO38_RS06650;product=C4-dicarboxylate transporter DctA;protein_id=WP_011883253.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 7687 8694 . + . ID=gene-LDO38_RS06655;Name=alc;gbkey=Gene;gene=alc;gene_biotype=protein_coding;locus_tag=LDO38_RS06655;old_locus_tag=BVI2075_170008 NZ_CAJZAL010000079.1 Protein Homology CDS 7687 8694 . + 0 ID=cds-WP_046422608.1;Parent=gene-LDO38_RS06655;Dbxref=GenBank:WP_046422608.1;Name=WP_046422608.1;Ontology_term=GO:0000256,GO:0004037;gbkey=CDS;gene=alc;go_function=allantoicase activity|0004037||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476931.1;locus_tag=LDO38_RS06655;product=allantoicase;protein_id=WP_046422608.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 8709 9239 . + . ID=gene-LDO38_RS06660;Name=LDO38_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06660;old_locus_tag=BVI2075_170009 NZ_CAJZAL010000079.1 Protein Homology CDS 8709 9239 . + 0 ID=cds-WP_059740397.1;Parent=gene-LDO38_RS06660;Dbxref=GenBank:WP_059740397.1;Name=WP_059740397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091325.1;locus_tag=LDO38_RS06660;product=ureidoglycolate lyase;protein_id=WP_059740397.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 9334 9762 . - . ID=gene-LDO38_RS06665;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=LDO38_RS06665;old_locus_tag=BVI2075_170010 NZ_CAJZAL010000079.1 Protein Homology CDS 9334 9762 . - 0 ID=cds-WP_011883256.1;Parent=gene-LDO38_RS06665;Dbxref=GenBank:WP_011883256.1;Name=WP_011883256.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006051897.1;locus_tag=LDO38_RS06665;product=ferric iron uptake transcriptional regulator;protein_id=WP_011883256.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 9905 10711 . + . ID=gene-LDO38_RS06670;Name=LDO38_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06670;old_locus_tag=BVI2075_170011 NZ_CAJZAL010000079.1 Protein Homology CDS 9905 10711 . + 0 ID=cds-WP_014722437.1;Parent=gene-LDO38_RS06670;Dbxref=GenBank:WP_014722437.1;Name=WP_014722437.1;Ontology_term=GO:0051205,GO:0030674,GO:1990063;gbkey=CDS;go_component=Bam protein complex|1990063||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=protein insertion into membrane|0051205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496725.1;locus_tag=LDO38_RS06670;product=outer membrane protein assembly factor BamE;protein_id=WP_014722437.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 10778 11575 . + . ID=gene-LDO38_RS06675;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=LDO38_RS06675;old_locus_tag=BVI2075_170012 NZ_CAJZAL010000079.1 Protein Homology CDS 10778 11575 . + 0 ID=cds-WP_011883258.1;Parent=gene-LDO38_RS06675;Dbxref=GenBank:WP_011883258.1;Name=WP_011883258.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762730.1;locus_tag=LDO38_RS06675;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_011883258.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 11595 12290 . + . ID=gene-LDO38_RS06680;Name=LDO38_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06680;old_locus_tag=BVI2075_170013 NZ_CAJZAL010000079.1 Protein Homology CDS 11595 12290 . + 0 ID=cds-WP_011883259.1;Parent=gene-LDO38_RS06680;Dbxref=GenBank:WP_011883259.1;Name=WP_011883259.1;Ontology_term=GO:0015031,GO:0015252,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=proton channel activity|0015252||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883259.1;locus_tag=LDO38_RS06680;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_011883259.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 12313 12768 . + . ID=gene-LDO38_RS06685;Name=LDO38_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06685;old_locus_tag=BVI2075_170014 NZ_CAJZAL010000079.1 Protein Homology CDS 12313 12768 . + 0 ID=cds-WP_011883260.1;Parent=gene-LDO38_RS06685;Dbxref=GenBank:WP_011883260.1;Name=WP_011883260.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883260.1;locus_tag=LDO38_RS06685;product=ExbD/TolR family protein;protein_id=WP_011883260.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 13050 15644 . + . ID=gene-LDO38_RS06690;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=LDO38_RS06690;old_locus_tag=BVI2075_170015 NZ_CAJZAL010000079.1 Protein Homology CDS 13050 15644 . + 0 ID=cds-WP_014722439.1;Parent=gene-LDO38_RS06690;Dbxref=GenBank:WP_014722439.1;Name=WP_014722439.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363082.1;locus_tag=LDO38_RS06690;product=leucine--tRNA ligase;protein_id=WP_014722439.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 15683 16237 . + . ID=gene-LDO38_RS06695;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=LDO38_RS06695;old_locus_tag=BVI2075_170016 NZ_CAJZAL010000079.1 Protein Homology CDS 15683 16237 . + 0 ID=cds-WP_014722440.1;Parent=gene-LDO38_RS06695;Dbxref=GenBank:WP_014722440.1;Name=WP_014722440.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765183.1;locus_tag=LDO38_RS06695;product=LPS assembly lipoprotein LptE;protein_id=WP_014722440.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 16256 17350 . + . ID=gene-LDO38_RS06700;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=LDO38_RS06700;old_locus_tag=BVI2075_170017 NZ_CAJZAL010000079.1 Protein Homology CDS 16256 17350 . + 0 ID=cds-WP_011883263.1;Parent=gene-LDO38_RS06700;Dbxref=GenBank:WP_011883263.1;Name=WP_011883263.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400342.1;locus_tag=LDO38_RS06700;product=DNA polymerase III subunit delta;protein_id=WP_011883263.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 17489 18760 . + . ID=gene-LDO38_RS06705;Name=LDO38_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06705;old_locus_tag=BVI2075_170019 NZ_CAJZAL010000079.1 Protein Homology CDS 17489 18760 . + 0 ID=cds-WP_011883264.1;Parent=gene-LDO38_RS06705;Dbxref=GenBank:WP_011883264.1;Name=WP_011883264.1;Ontology_term=GO:0006561,GO:0004350,GO:0016620;gbkey=CDS;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413382.1;locus_tag=LDO38_RS06705;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_011883264.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 18778 19200 . + . ID=gene-LDO38_RS06710;Name=LDO38_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06710;old_locus_tag=BVI2075_170018 NZ_CAJZAL010000079.1 Protein Homology CDS 18778 19200 . + 0 ID=cds-WP_014722442.1;Parent=gene-LDO38_RS06710;Dbxref=GenBank:WP_014722442.1;Name=WP_014722442.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483416.1;locus_tag=LDO38_RS06710;product=CopD family protein;protein_id=WP_014722442.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 19288 20136 . - . ID=gene-LDO38_RS06715;Name=LDO38_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06715;old_locus_tag=BVI2075_170020 NZ_CAJZAL010000079.1 Protein Homology CDS 19288 20136 . - 0 ID=cds-WP_011883266.1;Parent=gene-LDO38_RS06715;Dbxref=GenBank:WP_011883266.1;Name=WP_011883266.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476919.1;locus_tag=LDO38_RS06715;product=MurR/RpiR family transcriptional regulator;protein_id=WP_011883266.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 20432 22288 . + . ID=gene-LDO38_RS06720;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=LDO38_RS06720;old_locus_tag=BVI2075_170021 NZ_CAJZAL010000079.1 Protein Homology CDS 20432 22288 . + 0 ID=cds-WP_011883267.1;Parent=gene-LDO38_RS06720;Dbxref=GenBank:WP_011883267.1;Name=WP_011883267.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009903961.1;locus_tag=LDO38_RS06720;product=phosphogluconate dehydratase;protein_id=WP_011883267.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 22308 22934 . + . ID=gene-LDO38_RS06725;Name=eda;gbkey=Gene;gene=eda;gene_biotype=protein_coding;locus_tag=LDO38_RS06725;old_locus_tag=BVI2075_170022 NZ_CAJZAL010000079.1 Protein Homology CDS 22308 22934 . + 0 ID=cds-WP_011883268.1;Parent=gene-LDO38_RS06725;Dbxref=GenBank:WP_011883268.1;Name=WP_011883268.1;Ontology_term=GO:0009255,GO:0008675,GO:0008700;gbkey=CDS;gene=eda;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA,(R%2CS)-4-hydroxy-2-oxoglutarate aldolase activity|0008700||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760216.1;locus_tag=LDO38_RS06725;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_011883268.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 23156 24517 . + . ID=gene-LDO38_RS06730;Name=LDO38_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06730;old_locus_tag=BVI2075_170023 NZ_CAJZAL010000079.1 Protein Homology CDS 23156 24517 . + 0 ID=cds-WP_046422617.1;Parent=gene-LDO38_RS06730;Dbxref=GenBank:WP_046422617.1;Name=WP_046422617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600646.1;locus_tag=LDO38_RS06730;product=GntP family permease;protein_id=WP_046422617.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 24531 25034 . + . ID=gene-LDO38_RS06735;Name=LDO38_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06735;old_locus_tag=BVI2075_170024 NZ_CAJZAL010000079.1 Protein Homology CDS 24531 25034 . + 0 ID=cds-WP_011883270.1;Parent=gene-LDO38_RS06735;Dbxref=GenBank:WP_011883270.1;Name=WP_011883270.1;Ontology_term=GO:0046177,GO:0005524,GO:0046316;gbkey=CDS;go_function=ATP binding|0005524||IEA,gluconokinase activity|0046316||IEA;go_process=obsolete D-gluconate catabolic process|0046177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753807.1;locus_tag=LDO38_RS06735;product=gluconokinase;protein_id=WP_011883270.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 25144 26532 . - . ID=gene-LDO38_RS06740;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=LDO38_RS06740;old_locus_tag=BVI2075_170025 NZ_CAJZAL010000079.1 Protein Homology CDS 25144 26532 . - 0 ID=cds-WP_011883271.1;Parent=gene-LDO38_RS06740;Dbxref=GenBank:WP_011883271.1;Name=WP_011883271.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908754.1;locus_tag=LDO38_RS06740;product=adenylosuccinate lyase;protein_id=WP_011883271.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 26735 27688 . + . ID=gene-LDO38_RS06745;Name=LDO38_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06745;old_locus_tag=BVI2075_170026 NZ_CAJZAL010000079.1 Protein Homology CDS 26735 27688 . + 0 ID=cds-WP_011883272.1;Parent=gene-LDO38_RS06745;Dbxref=GenBank:WP_011883272.1;Name=WP_011883272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413390.1;locus_tag=LDO38_RS06745;product=LysR substrate-binding domain-containing protein;protein_id=WP_011883272.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 28267 29553 . + . ID=gene-LDO38_RS06750;Name=LDO38_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06750;old_locus_tag=BVI2075_170028 NZ_CAJZAL010000079.1 Protein Homology CDS 28267 29553 . + 0 ID=cds-WP_011883273.1;Parent=gene-LDO38_RS06750;Dbxref=GenBank:WP_011883273.1;Name=WP_011883273.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898081.1;locus_tag=LDO38_RS06750;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_011883273.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 29806 30699 . + . ID=gene-LDO38_RS06755;Name=LDO38_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06755;old_locus_tag=BVI2075_170029 NZ_CAJZAL010000079.1 Protein Homology CDS 29806 30699 . + 0 ID=cds-WP_011883274.1;Parent=gene-LDO38_RS06755;Dbxref=GenBank:WP_011883274.1;Name=WP_011883274.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889082.1;locus_tag=LDO38_RS06755;product=glutamate/aspartate ABC transporter substrate-binding protein;protein_id=WP_011883274.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 30784 31524 . + . ID=gene-LDO38_RS06760;Name=LDO38_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06760;old_locus_tag=BVI2075_170030 NZ_CAJZAL010000079.1 Protein Homology CDS 30784 31524 . + 0 ID=cds-WP_045578534.1;Parent=gene-LDO38_RS06760;Dbxref=GenBank:WP_045578534.1;Name=WP_045578534.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601464.1;locus_tag=LDO38_RS06760;product=amino acid ABC transporter permease;protein_id=WP_045578534.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 31524 32201 . + . ID=gene-LDO38_RS06765;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=LDO38_RS06765;old_locus_tag=BVI2075_170031 NZ_CAJZAL010000079.1 Protein Homology CDS 31524 32201 . + 0 ID=cds-WP_011883276.1;Parent=gene-LDO38_RS06765;Dbxref=GenBank:WP_011883276.1;Name=WP_011883276.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025271.1;locus_tag=LDO38_RS06765;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_011883276.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 32198 32923 . + . ID=gene-LDO38_RS06770;Name=LDO38_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06770;old_locus_tag=BVI2075_170032 NZ_CAJZAL010000079.1 Protein Homology CDS 32198 32923 . + 0 ID=cds-WP_011883277.1;Parent=gene-LDO38_RS06770;Dbxref=GenBank:WP_011883277.1;Name=WP_011883277.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=LDO38_RS06770;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_011883277.1;transl_table=11 NZ_CAJZAL010000079.1 RefSeq gene 33040 34810 . - . ID=gene-LDO38_RS06775;Name=LDO38_RS06775;end_range=34810,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06775;old_locus_tag=BVI2075_170033;partial=true NZ_CAJZAL010000079.1 Protein Homology CDS 33040 34810 . - 1 ID=cds-WP_224056281.1;Parent=gene-LDO38_RS06775;Dbxref=GenBank:WP_224056281.1;Name=WP_224056281.1;Ontology_term=GO:0019867;end_range=34810,.;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883278.1;locus_tag=LDO38_RS06775;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_224056281.1;transl_table=11 ##sequence-region NZ_CAJZAL010000080.1 1 1686 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000080.1 RefSeq region 1 1686 . + . ID=NZ_CAJZAL010000080.1:1..1686;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_170 NZ_CAJZAL010000080.1 RefSeq gene 93 1568 . - . ID=gene-LDO38_RS06780;Name=LDO38_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06780;old_locus_tag=BVI2075_1700001 NZ_CAJZAL010000080.1 Protein Homology CDS 93 1568 . - 0 ID=cds-WP_059461785.1;Parent=gene-LDO38_RS06780;Dbxref=GenBank:WP_059461785.1;Name=WP_059461785.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336742.1;locus_tag=LDO38_RS06780;product=ISNCY family transposase;protein_id=WP_059461785.1;transl_table=11 ##sequence-region NZ_CAJZAL010000081.1 1 4222 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000081.1 RefSeq region 1 4222 . + . ID=NZ_CAJZAL010000081.1:1..4222;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_171 NZ_CAJZAL010000081.1 RefSeq pseudogene 1 124 . - . ID=gene-LDO38_RS30425;Name=LDO38_RS30425;end_range=124,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30425;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000081.1 Protein Homology CDS 1 124 . - 1 ID=cds-LDO38_RS30425;Parent=gene-LDO38_RS30425;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=124,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025230.1;locus_tag=LDO38_RS30425;partial=true;product=thiamine-phosphate kinase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000081.1 RefSeq gene 135 462 . - . ID=gene-LDO38_RS06785;Name=LDO38_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06785;old_locus_tag=BVI2075_1710001;partial=true;start_range=.,135 NZ_CAJZAL010000081.1 Protein Homology CDS 135 462 . - 0 ID=cds-WP_435520915.1;Parent=gene-LDO38_RS06785;Dbxref=GenBank:WP_435520915.1;Name=WP_435520915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363067.1;locus_tag=LDO38_RS06785;partial=true;product=AIR synthase related protein;protein_id=WP_435520915.1;start_range=.,135;transl_table=11 NZ_CAJZAL010000081.1 RefSeq gene 563 2905 . + . ID=gene-LDO38_RS06790;Name=LDO38_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06790;old_locus_tag=BVI2075_1710002 NZ_CAJZAL010000081.1 Protein Homology CDS 563 2905 . + 0 ID=cds-WP_269152895.1;Parent=gene-LDO38_RS06790;Dbxref=GenBank:WP_269152895.1;Name=WP_269152895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760308.1;locus_tag=LDO38_RS06790;product=NADP-dependent malic enzyme;protein_id=WP_269152895.1;transl_table=11 NZ_CAJZAL010000081.1 RefSeq gene 3282 3713 . + . ID=gene-LDO38_RS06795;Name=LDO38_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06795;old_locus_tag=BVI2075_1710004 NZ_CAJZAL010000081.1 Protein Homology CDS 3282 3713 . + 0 ID=cds-WP_176000521.1;Parent=gene-LDO38_RS06795;Dbxref=GenBank:WP_176000521.1;Name=WP_176000521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194152.1;locus_tag=LDO38_RS06795;product=ribonuclease;protein_id=WP_176000521.1;transl_table=11 NZ_CAJZAL010000081.1 RefSeq gene 3730 4222 . + . ID=gene-LDO38_RS06800;Name=LDO38_RS06800;end_range=4222,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06800;partial=true NZ_CAJZAL010000081.1 Protein Homology CDS 3730 4222 . + 0 ID=cds-WP_224056283.1;Parent=gene-LDO38_RS06800;Dbxref=GenBank:WP_224056283.1;Name=WP_224056283.1;end_range=4222,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350906.1;locus_tag=LDO38_RS06800;partial=true;product=barstar family protein;protein_id=WP_224056283.1;transl_table=11 ##sequence-region NZ_CAJZAL010000082.1 1 3946 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000082.1 RefSeq region 1 3946 . + . ID=NZ_CAJZAL010000082.1:1..3946;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_172 NZ_CAJZAL010000082.1 RefSeq gene 1 3946 . - . ID=gene-LDO38_RS06805;Name=LDO38_RS06805;end_range=3946,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06805;partial=true;start_range=.,1 NZ_CAJZAL010000082.1 Protein Homology CDS 1 3946 . - 2 ID=cds-WP_224056284.1;Parent=gene-LDO38_RS06805;Dbxref=GenBank:WP_224056284.1;Name=WP_224056284.1;end_range=3946,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725946.1;locus_tag=LDO38_RS06805;partial=true;product=type I polyketide synthase;protein_id=WP_224056284.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAL010000083.1 1 2101 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000083.1 RefSeq region 1 2101 . + . ID=NZ_CAJZAL010000083.1:1..2101;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_173 NZ_CAJZAL010000083.1 RefSeq pseudogene 1 197 . + . ID=gene-LDO38_RS06810;Name=LDO38_RS06810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS06810;old_locus_tag=BVI2075_1730001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000083.1 Protein Homology CDS 1 197 . + 2 ID=cds-LDO38_RS06810;Parent=gene-LDO38_RS06810;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396592.1;locus_tag=LDO38_RS06810;partial=true;product=SctK family type III secretion system sorting platform protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000083.1 RefSeq gene 179 796 . + . ID=gene-LDO38_RS06815;Name=sctL;gbkey=Gene;gene=sctL;gene_biotype=protein_coding;locus_tag=LDO38_RS06815;old_locus_tag=BVI2075_1730002 NZ_CAJZAL010000083.1 Protein Homology CDS 179 796 . + 0 ID=cds-WP_034194308.1;Parent=gene-LDO38_RS06815;Dbxref=GenBank:WP_034194308.1;Name=WP_034194308.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctL;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725402.1;locus_tag=LDO38_RS06815;product=type III secretion system stator protein SctL;protein_id=WP_034194308.1;transl_table=11 NZ_CAJZAL010000083.1 RefSeq gene 793 2101 . + . ID=gene-LDO38_RS06820;Name=LDO38_RS06820;end_range=2101,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06820;partial=true NZ_CAJZAL010000083.1 Protein Homology CDS 793 2101 . + 0 ID=cds-WP_224056285.1;Parent=gene-LDO38_RS06820;Dbxref=GenBank:WP_224056285.1;Name=WP_224056285.1;Ontology_term=GO:0005524,GO:0016887;end_range=2101,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216602.1;locus_tag=LDO38_RS06820;partial=true;product=FliI/YscN family ATPase;protein_id=WP_224056285.1;transl_table=11 ##sequence-region NZ_CAJZAL010000084.1 1 1670 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000084.1 RefSeq region 1 1670 . + . ID=NZ_CAJZAL010000084.1:1..1670;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_174 NZ_CAJZAL010000084.1 RefSeq gene 196 732 . + . ID=gene-LDO38_RS06825;Name=LDO38_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06825;old_locus_tag=BVI2075_1740001 NZ_CAJZAL010000084.1 Protein Homology CDS 196 732 . + 0 ID=cds-WP_059567960.1;Parent=gene-LDO38_RS06825;Dbxref=GenBank:WP_059567960.1;Name=WP_059567960.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494058.1;locus_tag=LDO38_RS06825;product=NUDIX domain-containing protein;protein_id=WP_059567960.1;transl_table=11 NZ_CAJZAL010000084.1 RefSeq gene 830 1267 . + . ID=gene-LDO38_RS06830;Name=LDO38_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06830;old_locus_tag=BVI2075_1740002 NZ_CAJZAL010000084.1 Protein Homology CDS 830 1267 . + 0 ID=cds-WP_011884432.1;Parent=gene-LDO38_RS06830;Dbxref=GenBank:WP_011884432.1;Name=WP_011884432.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884432.1;locus_tag=LDO38_RS06830;product=acyl-CoA thioesterase;protein_id=WP_011884432.1;transl_table=11 NZ_CAJZAL010000084.1 RefSeq gene 1287 1670 . + . ID=gene-LDO38_RS06835;Name=LDO38_RS06835;end_range=1670,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06835;partial=true NZ_CAJZAL010000084.1 Protein Homology CDS 1287 1670 . + 0 ID=cds-WP_435520916.1;Parent=gene-LDO38_RS06835;Dbxref=GenBank:WP_435520916.1;Name=WP_435520916.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=1670,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897291.1;locus_tag=LDO38_RS06835;partial=true;product=ABC transporter permease subunit;protein_id=WP_435520916.1;transl_table=11 ##sequence-region NZ_CAJZAL010000085.1 1 340 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000085.1 RefSeq region 1 340 . + . ID=NZ_CAJZAL010000085.1:1..340;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_175 NZ_CAJZAL010000085.1 RefSeq pseudogene 139 340 . + . ID=gene-LDO38_RS30430;Name=LDO38_RS30430;end_range=340,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30430;partial=true;pseudo=true;start_range=.,139 NZ_CAJZAL010000085.1 Protein Homology CDS 139 340 . + 0 ID=cds-LDO38_RS30430;Parent=gene-LDO38_RS30430;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=340,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003276652.1;locus_tag=LDO38_RS30430;partial=true;product=hypothetical protein;pseudo=true;start_range=.,139;transl_table=11 ##sequence-region NZ_CAJZAL010000086.1 1 3808 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000086.1 RefSeq region 1 3808 . + . ID=NZ_CAJZAL010000086.1:1..3808;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_176 NZ_CAJZAL010000086.1 RefSeq gene 1 3656 . - . ID=gene-LDO38_RS06845;Name=LDO38_RS06845;end_range=3656,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06845;partial=true;start_range=.,1 NZ_CAJZAL010000086.1 Protein Homology CDS 1 3656 . - 1 ID=cds-WP_224056286.1;Parent=gene-LDO38_RS06845;Dbxref=GenBank:WP_224056286.1;Name=WP_224056286.1;end_range=3656,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884803.1;locus_tag=LDO38_RS06845;partial=true;product=amino acid adenylation domain-containing protein;protein_id=WP_224056286.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAL010000087.1 1 1580 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000087.1 RefSeq region 1 1580 . + . ID=NZ_CAJZAL010000087.1:1..1580;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_177 NZ_CAJZAL010000087.1 RefSeq gene 1 1580 . + . ID=gene-LDO38_RS06850;Name=LDO38_RS06850;end_range=1580,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06850;partial=true;start_range=.,1 NZ_CAJZAL010000087.1 Protein Homology CDS 1 1580 . + 1 ID=cds-WP_224056287.1;Parent=gene-LDO38_RS06850;Dbxref=GenBank:WP_224056287.1;Name=WP_224056287.1;end_range=1580,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213362.1;locus_tag=LDO38_RS06850;partial=true;product=amino acid adenylation domain-containing protein;protein_id=WP_224056287.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAL010000088.1 1 1377 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000088.1 RefSeq region 1 1377 . + . ID=NZ_CAJZAL010000088.1:1..1377;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_178 NZ_CAJZAL010000088.1 RefSeq gene 1 925 . - . ID=gene-LDO38_RS06855;Name=LDO38_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06855;partial=true;start_range=.,1 NZ_CAJZAL010000088.1 Protein Homology CDS 1 925 . - 0 ID=cds-WP_224056288.1;Parent=gene-LDO38_RS06855;Dbxref=GenBank:WP_224056288.1;Name=WP_224056288.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476046.1;locus_tag=LDO38_RS06855;partial=true;product=condensation domain-containing protein;protein_id=WP_224056288.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000088.1 RefSeq gene 935 1377 . - . ID=gene-LDO38_RS06860;Name=LDO38_RS06860;end_range=1377,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06860;old_locus_tag=BVI2075_1780002;partial=true NZ_CAJZAL010000088.1 Protein Homology CDS 935 1377 . - 2 ID=cds-WP_224056289.1;Parent=gene-LDO38_RS06860;Dbxref=GenBank:WP_224056289.1;Name=WP_224056289.1;end_range=1377,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400101.1;locus_tag=LDO38_RS06860;partial=true;product=phosphopantetheine-binding protein;protein_id=WP_224056289.1;transl_table=11 ##sequence-region NZ_CAJZAL010000089.1 1 2394 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000089.1 RefSeq region 1 2394 . + . ID=NZ_CAJZAL010000089.1:1..2394;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_179 NZ_CAJZAL010000089.1 RefSeq gene 190 1089 . + . ID=gene-LDO38_RS30435;Name=LDO38_RS30435;end_range=1089,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30435;old_locus_tag=BVI2075_1790002;partial=true;start_range=.,190 NZ_CAJZAL010000089.1 Protein Homology CDS 190 1089 . + 0 ID=cds-WP_435520917.1;Parent=gene-LDO38_RS30435;Dbxref=GenBank:WP_435520917.1;Name=WP_435520917.1;end_range=1089,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725396.1;locus_tag=LDO38_RS30435;partial=true;product=hypothetical protein;protein_id=WP_435520917.1;start_range=.,190;transl_table=11 NZ_CAJZAL010000089.1 RefSeq pseudogene 1100 2394 . + . ID=gene-LDO38_RS06865;Name=LDO38_RS06865;end_range=2394,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS06865;partial=true;pseudo=true;start_range=.,1100 NZ_CAJZAL010000089.1 Protein Homology CDS 1100 2394 . + 0 ID=cds-LDO38_RS06865;Parent=gene-LDO38_RS06865;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=2394,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547305.1;locus_tag=LDO38_RS06865;partial=true;product=LWXIA domain-containing protein;pseudo=true;start_range=.,1100;transl_table=11 ##sequence-region NZ_CAJZAL010000090.1 1 226603 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000090.1 RefSeq region 1 226603 . + . ID=NZ_CAJZAL010000090.1:1..226603;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_18 NZ_CAJZAL010000090.1 RefSeq gene 1 1645 . + . ID=gene-LDO38_RS06870;Name=LDO38_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06870;old_locus_tag=BVI2075_180001;partial=true;start_range=.,1 NZ_CAJZAL010000090.1 Protein Homology CDS 1 1645 . + 1 ID=cds-WP_224056290.1;Parent=gene-LDO38_RS06870;Dbxref=GenBank:WP_224056290.1;Name=WP_224056290.1;Ontology_term=GO:0009055,GO:0010181,GO:0016491,GO:0050660,GO:0050661;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494734.1;locus_tag=LDO38_RS06870;partial=true;product=diflavin oxidoreductase;protein_id=WP_224056290.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 2162 4756 . + . ID=gene-LDO38_RS06875;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=protein_coding;locus_tag=LDO38_RS06875;old_locus_tag=BVI2075_180003 NZ_CAJZAL010000090.1 Protein Homology CDS 2162 4756 . + 0 ID=cds-WP_011882318.1;Parent=gene-LDO38_RS06875;Dbxref=GenBank:WP_011882318.1;Name=WP_011882318.1;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354955.1;locus_tag=LDO38_RS06875;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=WP_011882318.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 4753 6033 . + . ID=gene-LDO38_RS06880;Name=LDO38_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06880;old_locus_tag=BVI2075_180004 NZ_CAJZAL010000090.1 Protein Homology CDS 4753 6033 . + 0 ID=cds-WP_059621659.1;Parent=gene-LDO38_RS06880;Dbxref=GenBank:WP_059621659.1;Name=WP_059621659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216935.1;locus_tag=LDO38_RS06880;product=virulence factor family protein;protein_id=WP_059621659.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 6213 7646 . - . ID=gene-LDO38_RS06885;Name=LDO38_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06885;old_locus_tag=BVI2075_180005 NZ_CAJZAL010000090.1 Protein Homology CDS 6213 7646 . - 0 ID=cds-WP_011882316.1;Parent=gene-LDO38_RS06885;Dbxref=GenBank:WP_011882316.1;Name=WP_011882316.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899135.1;locus_tag=LDO38_RS06885;product=PLP-dependent aminotransferase family protein;protein_id=WP_011882316.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 7876 9012 . + . ID=gene-LDO38_RS06890;Name=LDO38_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06890;old_locus_tag=BVI2075_180006 NZ_CAJZAL010000090.1 Protein Homology CDS 7876 9012 . + 0 ID=cds-WP_224056291.1;Parent=gene-LDO38_RS06890;Dbxref=GenBank:WP_224056291.1;Name=WP_224056291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760079.1;locus_tag=LDO38_RS06890;product=extracellular solute-binding protein;protein_id=WP_224056291.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 9009 10784 . + . ID=gene-LDO38_RS06895;Name=LDO38_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06895;old_locus_tag=BVI2075_180007 NZ_CAJZAL010000090.1 Protein Homology CDS 9009 10784 . + 0 ID=cds-WP_046426432.1;Parent=gene-LDO38_RS06895;Dbxref=GenBank:WP_046426432.1;Name=WP_046426432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724820.1;locus_tag=LDO38_RS06895;product=diguanylate cyclase domain-containing protein;protein_id=WP_046426432.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 10890 11192 . - . ID=gene-LDO38_RS06900;Name=LDO38_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06900;old_locus_tag=BVI2075_180008 NZ_CAJZAL010000090.1 Protein Homology CDS 10890 11192 . - 0 ID=cds-WP_011882313.1;Parent=gene-LDO38_RS06900;Dbxref=GenBank:WP_011882313.1;Name=WP_011882313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478947.1;locus_tag=LDO38_RS06900;product=DUF4148 domain-containing protein;protein_id=WP_011882313.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 11411 11671 . - . ID=gene-LDO38_RS06905;Name=LDO38_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06905;old_locus_tag=BVI2075_180010 NZ_CAJZAL010000090.1 Protein Homology CDS 11411 11671 . - 0 ID=cds-WP_059474868.1;Parent=gene-LDO38_RS06905;Dbxref=GenBank:WP_059474868.1;Name=WP_059474868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494747.1;locus_tag=LDO38_RS06905;product=hypothetical protein;protein_id=WP_059474868.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 11780 12619 . - . ID=gene-LDO38_RS06910;Name=LDO38_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06910;old_locus_tag=BVI2075_180012 NZ_CAJZAL010000090.1 Protein Homology CDS 11780 12619 . - 0 ID=cds-WP_059991572.1;Parent=gene-LDO38_RS06910;Dbxref=GenBank:WP_059991572.1;Name=WP_059991572.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882311.1;locus_tag=LDO38_RS06910;product=sulfite exporter TauE/SafE family protein;protein_id=WP_059991572.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 12616 12792 . - . ID=gene-LDO38_RS06915;Name=LDO38_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06915 NZ_CAJZAL010000090.1 GeneMarkS-2+ CDS 12616 12792 . - 0 ID=cds-WP_155121975.1;Parent=gene-LDO38_RS06915;Dbxref=GenBank:WP_155121975.1;Name=WP_155121975.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS06915;product=hypothetical protein;protein_id=WP_155121975.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 12845 13741 . + . ID=gene-LDO38_RS06920;Name=LDO38_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06920;old_locus_tag=BVI2075_180011 NZ_CAJZAL010000090.1 Protein Homology CDS 12845 13741 . + 0 ID=cds-WP_045577946.1;Parent=gene-LDO38_RS06920;Dbxref=GenBank:WP_045577946.1;Name=WP_045577946.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494749.1;locus_tag=LDO38_RS06920;product=LysR family transcriptional regulator;protein_id=WP_045577946.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 13867 14499 . + . ID=gene-LDO38_RS06925;Name=LDO38_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06925;old_locus_tag=BVI2075_180013 NZ_CAJZAL010000090.1 Protein Homology CDS 13867 14499 . + 0 ID=cds-WP_045577947.1;Parent=gene-LDO38_RS06925;Dbxref=GenBank:WP_045577947.1;Name=WP_045577947.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899147.1;locus_tag=LDO38_RS06925;product=LysE family translocator;protein_id=WP_045577947.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 14639 16342 . - . ID=gene-LDO38_RS06930;Name=LDO38_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06930;old_locus_tag=BVI2075_180014 NZ_CAJZAL010000090.1 Protein Homology CDS 14639 16342 . - 0 ID=cds-WP_059894114.1;Parent=gene-LDO38_RS06930;Dbxref=GenBank:WP_059894114.1;Name=WP_059894114.1;Ontology_term=GO:0016311,GO:0003993,GO:0046872;gbkey=CDS;go_function=acid phosphatase activity|0003993||IEA,metal ion binding|0046872||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724824.1;locus_tag=LDO38_RS06930;product=purple acid phosphatase family protein;protein_id=WP_059894114.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 16326 16658 . + . ID=gene-LDO38_RS06935;Name=LDO38_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06935 NZ_CAJZAL010000090.1 GeneMarkS-2+ CDS 16326 16658 . + 0 ID=cds-WP_155121974.1;Parent=gene-LDO38_RS06935;Dbxref=GenBank:WP_155121974.1;Name=WP_155121974.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS06935;product=hypothetical protein;protein_id=WP_155121974.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 16831 18219 . - . ID=gene-LDO38_RS06940;Name=LDO38_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06940;old_locus_tag=BVI2075_180016 NZ_CAJZAL010000090.1 Protein Homology CDS 16831 18219 . - 0 ID=cds-WP_059474870.1;Parent=gene-LDO38_RS06940;Dbxref=GenBank:WP_059474870.1;Name=WP_059474870.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355013.1;locus_tag=LDO38_RS06940;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_059474870.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 18685 19056 . - . ID=gene-LDO38_RS06945;Name=LDO38_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06945 NZ_CAJZAL010000090.1 GeneMarkS-2+ CDS 18685 19056 . - 0 ID=cds-WP_124260087.1;Parent=gene-LDO38_RS06945;Dbxref=GenBank:WP_124260087.1;Name=WP_124260087.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS06945;product=hypothetical protein;protein_id=WP_124260087.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 19334 20413 . - . ID=gene-LDO38_RS06950;Name=LDO38_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06950;old_locus_tag=BVI2075_180018 NZ_CAJZAL010000090.1 Protein Homology CDS 19334 20413 . - 0 ID=cds-WP_059696255.1;Parent=gene-LDO38_RS06950;Dbxref=GenBank:WP_059696255.1;Name=WP_059696255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882305.1;locus_tag=LDO38_RS06950;product=linear amide C-N hydrolase;protein_id=WP_059696255.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 20876 21079 . + . ID=gene-LDO38_RS06955;Name=LDO38_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06955;old_locus_tag=BVI2075_180020 NZ_CAJZAL010000090.1 Protein Homology CDS 20876 21079 . + 0 ID=cds-WP_011882304.1;Parent=gene-LDO38_RS06955;Dbxref=GenBank:WP_011882304.1;Name=WP_011882304.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329453.1;locus_tag=LDO38_RS06955;product=cold-shock protein;protein_id=WP_011882304.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 21521 21784 . + . ID=gene-LDO38_RS06960;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=LDO38_RS06960;old_locus_tag=BVI2075_180021 NZ_CAJZAL010000090.1 Protein Homology CDS 21521 21784 . + 0 ID=cds-WP_011882303.1;Parent=gene-LDO38_RS06960;Dbxref=GenBank:WP_011882303.1;Name=WP_011882303.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483034.1;locus_tag=LDO38_RS06960;product=translation initiation factor IF-1;protein_id=WP_011882303.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 22062 23450 . - . ID=gene-LDO38_RS06965;Name=LDO38_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06965;old_locus_tag=BVI2075_180022 NZ_CAJZAL010000090.1 Protein Homology CDS 22062 23450 . - 0 ID=cds-WP_069240247.1;Parent=gene-LDO38_RS06965;Dbxref=GenBank:WP_069240247.1;Name=WP_069240247.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483018.1;locus_tag=LDO38_RS06965;product=MFS transporter;protein_id=WP_069240247.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 23846 24094 . + . ID=gene-LDO38_RS06970;Name=LDO38_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06970;old_locus_tag=BVI2075_180023 NZ_CAJZAL010000090.1 Protein Homology CDS 23846 24094 . + 0 ID=cds-WP_059738457.1;Parent=gene-LDO38_RS06970;Dbxref=GenBank:WP_059738457.1;Name=WP_059738457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882301.1;locus_tag=LDO38_RS06970;product=hypothetical protein;protein_id=WP_059738457.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 24115 25278 . - . ID=gene-LDO38_RS06975;Name=LDO38_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06975;old_locus_tag=BVI2075_180024 NZ_CAJZAL010000090.1 Protein Homology CDS 24115 25278 . - 0 ID=cds-WP_059738459.1;Parent=gene-LDO38_RS06975;Dbxref=GenBank:WP_059738459.1;Name=WP_059738459.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882300.1;locus_tag=LDO38_RS06975;product=MFS transporter;protein_id=WP_059738459.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 25557 26201 . + . ID=gene-LDO38_RS06980;Name=LDO38_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06980;old_locus_tag=BVI2075_180026 NZ_CAJZAL010000090.1 Protein Homology CDS 25557 26201 . + 0 ID=cds-WP_011882299.1;Parent=gene-LDO38_RS06980;Dbxref=GenBank:WP_011882299.1;Name=WP_011882299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020066727.1;locus_tag=LDO38_RS06980;product=DUF1326 domain-containing protein;protein_id=WP_011882299.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 26198 26989 . + . ID=gene-LDO38_RS06985;Name=LDO38_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06985;old_locus_tag=BVI2075_180025 NZ_CAJZAL010000090.1 Protein Homology CDS 26198 26989 . + 0 ID=cds-WP_011882298.1;Parent=gene-LDO38_RS06985;Dbxref=GenBank:WP_011882298.1;Name=WP_011882298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366132.1;locus_tag=LDO38_RS06985;product=DUF2182 domain-containing protein;protein_id=WP_011882298.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 27138 27602 . - . ID=gene-LDO38_RS06990;Name=LDO38_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06990;old_locus_tag=BVI2075_180027 NZ_CAJZAL010000090.1 Protein Homology CDS 27138 27602 . - 0 ID=cds-WP_034195093.1;Parent=gene-LDO38_RS06990;Dbxref=GenBank:WP_034195093.1;Name=WP_034195093.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882286.1;locus_tag=LDO38_RS06990;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_034195093.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 27718 28356 . + . ID=gene-LDO38_RS06995;Name=LDO38_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS06995;old_locus_tag=BVI2075_180028 NZ_CAJZAL010000090.1 Protein Homology CDS 27718 28356 . + 0 ID=cds-WP_014724840.1;Parent=gene-LDO38_RS06995;Dbxref=GenBank:WP_014724840.1;Name=WP_014724840.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724840.1;locus_tag=LDO38_RS06995;product=LysE family translocator;protein_id=WP_014724840.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 28447 30375 . - . ID=gene-LDO38_RS07000;Name=LDO38_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07000;old_locus_tag=BVI2075_180029 NZ_CAJZAL010000090.1 Protein Homology CDS 28447 30375 . - 0 ID=cds-WP_059474872.1;Parent=gene-LDO38_RS07000;Dbxref=GenBank:WP_059474872.1;Name=WP_059474872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751815.1;locus_tag=LDO38_RS07000;product=TonB-dependent receptor domain-containing protein;protein_id=WP_059474872.1;transl_table=11 NZ_CAJZAL010000090.1 cmsearch riboswitch 30586 30778 . - . ID=id-NZ_CAJZAL010000090.1:30586..30778;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAL010000090.1 RefSeq gene 31023 32000 . - . ID=gene-LDO38_RS07005;Name=LDO38_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07005;old_locus_tag=BVI2075_180030 NZ_CAJZAL010000090.1 Protein Homology CDS 31023 32000 . - 0 ID=cds-WP_059669062.1;Parent=gene-LDO38_RS07005;Dbxref=GenBank:WP_059669062.1;Name=WP_059669062.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882283.1;locus_tag=LDO38_RS07005;product=threo-3-hydroxy-L-aspartate ammonia-lyase;protein_id=WP_059669062.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 32046 32684 . - . ID=gene-LDO38_RS07010;Name=LDO38_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07010;old_locus_tag=BVI2075_180031 NZ_CAJZAL010000090.1 Protein Homology CDS 32046 32684 . - 0 ID=cds-WP_045577953.1;Parent=gene-LDO38_RS07010;Dbxref=GenBank:WP_045577953.1;Name=WP_045577953.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882282.1;locus_tag=LDO38_RS07010;product=helix-turn-helix transcriptional regulator;protein_id=WP_045577953.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 32681 33202 . - . ID=gene-LDO38_RS07015;Name=LDO38_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07015;old_locus_tag=BVI2075_180032 NZ_CAJZAL010000090.1 Protein Homology CDS 32681 33202 . - 0 ID=cds-WP_011882281.1;Parent=gene-LDO38_RS07015;Dbxref=GenBank:WP_011882281.1;Name=WP_011882281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724843.1;locus_tag=LDO38_RS07015;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_011882281.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 33599 35185 . + . ID=gene-LDO38_RS07020;Name=LDO38_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07020;old_locus_tag=BVI2075_180034 NZ_CAJZAL010000090.1 Protein Homology CDS 33599 35185 . + 0 ID=cds-WP_011882280.1;Parent=gene-LDO38_RS07020;Dbxref=GenBank:WP_011882280.1;Name=WP_011882280.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757553.1;locus_tag=LDO38_RS07020;product=isocitrate lyase;protein_id=WP_011882280.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 35854 37719 . + . ID=gene-LDO38_RS07025;Name=LDO38_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07025;old_locus_tag=BVI2075_180035 NZ_CAJZAL010000090.1 Protein Homology CDS 35854 37719 . + 0 ID=cds-WP_069246481.1;Parent=gene-LDO38_RS07025;Dbxref=GenBank:WP_069246481.1;Name=WP_069246481.1;Ontology_term=GO:0006094,GO:0004611,GO:0005525,GO:0017076;gbkey=CDS;go_function=phosphoenolpyruvate carboxykinase activity|0004611||IEA,GTP binding|0005525||IEA,purine nucleotide binding|0017076||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882279.1;locus_tag=LDO38_RS07025;product=phosphoenolpyruvate carboxykinase (GTP);protein_id=WP_069246481.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 37886 39550 . - . ID=gene-LDO38_RS07030;Name=LDO38_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07030;old_locus_tag=BVI2075_180036 NZ_CAJZAL010000090.1 Protein Homology CDS 37886 39550 . - 0 ID=cds-WP_069246482.1;Parent=gene-LDO38_RS07030;Dbxref=GenBank:WP_069246482.1;Name=WP_069246482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753586.1;locus_tag=LDO38_RS07030;product=acid phosphatase;protein_id=WP_069246482.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 40226 41632 . - . ID=gene-LDO38_RS07035;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=LDO38_RS07035;old_locus_tag=BVI2075_180039 NZ_CAJZAL010000090.1 Protein Homology CDS 40226 41632 . - 0 ID=cds-WP_045577955.1;Parent=gene-LDO38_RS07035;Dbxref=GenBank:WP_045577955.1;Name=WP_045577955.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899315.1;locus_tag=LDO38_RS07035;product=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming);protein_id=WP_045577955.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 41777 42079 . - . ID=gene-LDO38_RS07040;Name=LDO38_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07040;old_locus_tag=BVI2075_180040 NZ_CAJZAL010000090.1 GeneMarkS-2+ CDS 41777 42079 . - 0 ID=cds-WP_124260086.1;Parent=gene-LDO38_RS07040;Dbxref=GenBank:WP_124260086.1;Name=WP_124260086.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS07040;product=hypothetical protein;protein_id=WP_124260086.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 42086 42247 . - . ID=gene-LDO38_RS07045;Name=LDO38_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07045;old_locus_tag=BVI2075_180041 NZ_CAJZAL010000090.1 GeneMarkS-2+ CDS 42086 42247 . - 0 ID=cds-WP_155121973.1;Parent=gene-LDO38_RS07045;Dbxref=GenBank:WP_155121973.1;Name=WP_155121973.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS07045;product=hypothetical protein;protein_id=WP_155121973.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 42467 44488 . - . ID=gene-LDO38_RS07050;Name=LDO38_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07050;old_locus_tag=BVI2075_180042 NZ_CAJZAL010000090.1 Protein Homology CDS 42467 44488 . - 0 ID=cds-WP_014724849.1;Parent=gene-LDO38_RS07050;Dbxref=GenBank:WP_014724849.1;Name=WP_014724849.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760343.1;locus_tag=LDO38_RS07050;product=TonB-dependent receptor;protein_id=WP_014724849.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 44963 45991 . + . ID=gene-LDO38_RS07055;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=LDO38_RS07055;old_locus_tag=BVI2075_180043 NZ_CAJZAL010000090.1 Protein Homology CDS 44963 45991 . + 0 ID=cds-WP_014724850.1;Parent=gene-LDO38_RS07055;Dbxref=GenBank:WP_014724850.1;Name=WP_014724850.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882274.1;locus_tag=LDO38_RS07055;product=alcohol dehydrogenase AdhP;protein_id=WP_014724850.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 46059 47543 . - . ID=gene-LDO38_RS07060;Name=LDO38_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07060;old_locus_tag=BVI2075_180044 NZ_CAJZAL010000090.1 Protein Homology CDS 46059 47543 . - 0 ID=cds-WP_059464122.1;Parent=gene-LDO38_RS07060;Dbxref=GenBank:WP_059464122.1;Name=WP_059464122.1;Ontology_term=GO:0005975,GO:0004308;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397007.1;locus_tag=LDO38_RS07060;product=sialidase family protein;protein_id=WP_059464122.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 47975 48406 . - . ID=gene-LDO38_RS07065;Name=LDO38_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07065;old_locus_tag=BVI2075_180045 NZ_CAJZAL010000090.1 Protein Homology CDS 47975 48406 . - 0 ID=cds-WP_011882272.1;Parent=gene-LDO38_RS07065;Dbxref=GenBank:WP_011882272.1;Name=WP_011882272.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882272.1;locus_tag=LDO38_RS07065;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_011882272.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 48403 49320 . - . ID=gene-LDO38_RS07070;Name=LDO38_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07070;old_locus_tag=BVI2075_180046 NZ_CAJZAL010000090.1 Protein Homology CDS 48403 49320 . - 0 ID=cds-WP_059696243.1;Parent=gene-LDO38_RS07070;Dbxref=GenBank:WP_059696243.1;Name=WP_059696243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355130.1;locus_tag=LDO38_RS07070;product=alpha/beta hydrolase family protein;protein_id=WP_059696243.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 49620 50585 . + . ID=gene-LDO38_RS07075;Name=LDO38_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07075;old_locus_tag=BVI2075_180047 NZ_CAJZAL010000090.1 Protein Homology CDS 49620 50585 . + 0 ID=cds-WP_081335144.1;Parent=gene-LDO38_RS07075;Dbxref=GenBank:WP_081335144.1;Name=WP_081335144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355131.1;locus_tag=LDO38_RS07075;product=ABC transporter substrate-binding protein;protein_id=WP_081335144.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 50861 51793 . - . ID=gene-LDO38_RS07080;Name=LDO38_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07080;old_locus_tag=BVI2075_180048 NZ_CAJZAL010000090.1 Protein Homology CDS 50861 51793 . - 0 ID=cds-WP_069246483.1;Parent=gene-LDO38_RS07080;Dbxref=GenBank:WP_069246483.1;Name=WP_069246483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494830.1;locus_tag=LDO38_RS07080;product=ABC transporter substrate-binding protein;protein_id=WP_069246483.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 51828 53612 . - . ID=gene-LDO38_RS30065;Name=LDO38_RS30065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30065;old_locus_tag=BVI2075_180049 NZ_CAJZAL010000090.1 Protein Homology CDS 51828 53612 . - 0 ID=cds-WP_290371173.1;Parent=gene-LDO38_RS30065;Dbxref=GenBank:WP_290371173.1;Name=WP_290371173.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339942.1;locus_tag=LDO38_RS30065;product=amino acid ABC transporter permease/ATP-binding protein;protein_id=WP_290371173.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 53680 55038 . - . ID=gene-LDO38_RS07095;Name=LDO38_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07095;old_locus_tag=BVI2075_180050 NZ_CAJZAL010000090.1 Protein Homology CDS 53680 55038 . - 0 ID=cds-WP_124260083.1;Parent=gene-LDO38_RS07095;Dbxref=GenBank:WP_124260083.1;Name=WP_124260083.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355135.1;locus_tag=LDO38_RS07095;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_124260083.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 55046 56095 . - . ID=gene-LDO38_RS07100;Name=LDO38_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07100;old_locus_tag=BVI2075_180051 NZ_CAJZAL010000090.1 Protein Homology CDS 55046 56095 . - 0 ID=cds-WP_011882266.1;Parent=gene-LDO38_RS07100;Dbxref=GenBank:WP_011882266.1;Name=WP_011882266.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754408.1;locus_tag=LDO38_RS07100;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_011882266.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 56131 57072 . - . ID=gene-LDO38_RS07105;Name=LDO38_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07105;old_locus_tag=BVI2075_180052 NZ_CAJZAL010000090.1 Protein Homology CDS 56131 57072 . - 0 ID=cds-WP_059696238.1;Parent=gene-LDO38_RS07105;Dbxref=GenBank:WP_059696238.1;Name=WP_059696238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899327.1;locus_tag=LDO38_RS07105;product=ABC transporter substrate-binding protein;protein_id=WP_059696238.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 57140 57700 . - . ID=gene-LDO38_RS07110;Name=LDO38_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07110;old_locus_tag=BVI2075_180053 NZ_CAJZAL010000090.1 Protein Homology CDS 57140 57700 . - 0 ID=cds-WP_124260082.1;Parent=gene-LDO38_RS07110;Dbxref=GenBank:WP_124260082.1;Name=WP_124260082.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413127.1;locus_tag=LDO38_RS07110;product=GNAT family N-acetyltransferase;protein_id=WP_124260082.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 58072 58755 . - . ID=gene-LDO38_RS07115;Name=LDO38_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07115;old_locus_tag=BVI2075_180054 NZ_CAJZAL010000090.1 Protein Homology CDS 58072 58755 . - 0 ID=cds-WP_124260081.1;Parent=gene-LDO38_RS07115;Dbxref=GenBank:WP_124260081.1;Name=WP_124260081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724859.1;locus_tag=LDO38_RS07115;product=hypothetical protein;protein_id=WP_124260081.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 58830 59864 . - . ID=gene-LDO38_RS07120;Name=LDO38_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07120;old_locus_tag=BVI2075_180055 NZ_CAJZAL010000090.1 Protein Homology CDS 58830 59864 . - 0 ID=cds-WP_034195080.1;Parent=gene-LDO38_RS07120;Dbxref=GenBank:WP_034195080.1;Name=WP_034195080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882262.1;locus_tag=LDO38_RS07120;product=succinylglutamate desuccinylase/aspartoacylase family protein;protein_id=WP_034195080.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 60072 60347 . - . ID=gene-LDO38_RS07125;Name=LDO38_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07125;old_locus_tag=BVI2075_180056 NZ_CAJZAL010000090.1 Protein Homology CDS 60072 60347 . - 0 ID=cds-WP_034195079.1;Parent=gene-LDO38_RS07125;Dbxref=GenBank:WP_034195079.1;Name=WP_034195079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413125.1;locus_tag=LDO38_RS07125;product=hypothetical protein;protein_id=WP_034195079.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 60594 62147 . - . ID=gene-LDO38_RS07130;Name=LDO38_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07130;old_locus_tag=BVI2075_180057 NZ_CAJZAL010000090.1 Protein Homology CDS 60594 62147 . - 0 ID=cds-WP_124260080.1;Parent=gene-LDO38_RS07130;Dbxref=GenBank:WP_124260080.1;Name=WP_124260080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658860.1;locus_tag=LDO38_RS07130;product=sensor domain-containing diguanylate cyclase;protein_id=WP_124260080.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 62684 62836 . - . ID=gene-LDO38_RS07135;Name=LDO38_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07135 NZ_CAJZAL010000090.1 Protein Homology CDS 62684 62836 . - 0 ID=cds-WP_014724861.1;Parent=gene-LDO38_RS07135;Dbxref=GenBank:WP_014724861.1;Name=WP_014724861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724861.1;locus_tag=LDO38_RS07135;product=hypothetical protein;protein_id=WP_014724861.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq pseudogene 63281 63364 . - . ID=gene-LDO38_RS07140;Name=LDO38_RS07140;end_range=63364,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS07140;partial=true;pseudo=true;start_range=.,63281 NZ_CAJZAL010000090.1 Protein Homology CDS 63281 63364 . - 0 ID=cds-LDO38_RS07140;Parent=gene-LDO38_RS07140;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=63364,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186227.1;locus_tag=LDO38_RS07140;partial=true;product=peptidoglycan-associated lipoprotein;pseudo=true;start_range=.,63281;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 63459 64604 . - . ID=gene-LDO38_RS07145;Name=LDO38_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07145;old_locus_tag=BVI2075_180059 NZ_CAJZAL010000090.1 Protein Homology CDS 63459 64604 . - 0 ID=cds-WP_371464382.1;Parent=gene-LDO38_RS07145;Dbxref=GenBank:WP_371464382.1;Name=WP_371464382.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335320.1;locus_tag=LDO38_RS07145;product=porin;protein_id=WP_371464382.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 65191 65385 . - . ID=gene-LDO38_RS07150;Name=LDO38_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07150;old_locus_tag=BVI2075_180061 NZ_CAJZAL010000090.1 Protein Homology CDS 65191 65385 . - 0 ID=cds-WP_045577964.1;Parent=gene-LDO38_RS07150;Dbxref=GenBank:WP_045577964.1;Name=WP_045577964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690790.1;locus_tag=LDO38_RS07150;product=hypothetical protein;protein_id=WP_045577964.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 65579 65803 . - . ID=gene-LDO38_RS07155;Name=LDO38_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07155;old_locus_tag=BVI2075_180062 NZ_CAJZAL010000090.1 Protein Homology CDS 65579 65803 . - 0 ID=cds-WP_011882255.1;Parent=gene-LDO38_RS07155;Dbxref=GenBank:WP_011882255.1;Name=WP_011882255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753082.1;locus_tag=LDO38_RS07155;product=hypothetical protein;protein_id=WP_011882255.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 66073 66276 . - . ID=gene-LDO38_RS07160;Name=LDO38_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07160;old_locus_tag=BVI2075_180063 NZ_CAJZAL010000090.1 Protein Homology CDS 66073 66276 . - 0 ID=cds-WP_006485974.1;Parent=gene-LDO38_RS07160;Dbxref=GenBank:WP_006485974.1;Name=WP_006485974.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014252848.1;locus_tag=LDO38_RS07160;product=cold-shock protein;protein_id=WP_006485974.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 66501 66785 . + . ID=gene-LDO38_RS30440;Name=LDO38_RS30440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30440 NZ_CAJZAL010000090.1 GeneMarkS-2+ CDS 66501 66785 . + 0 ID=cds-WP_124259677.1;Parent=gene-LDO38_RS30440;Dbxref=GenBank:WP_124259677.1;Name=WP_124259677.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30440;product=hypothetical protein;protein_id=WP_124259677.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 66782 67711 . + . ID=gene-LDO38_RS07165;Name=LDO38_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07165;old_locus_tag=BVI2075_180065 NZ_CAJZAL010000090.1 Protein Homology CDS 66782 67711 . + 0 ID=cds-WP_034195078.1;Parent=gene-LDO38_RS07165;Dbxref=GenBank:WP_034195078.1;Name=WP_034195078.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752883.1;locus_tag=LDO38_RS07165;product=TauD/TfdA dioxygenase family protein;protein_id=WP_034195078.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 67755 68810 . + . ID=gene-LDO38_RS07170;Name=LDO38_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07170;old_locus_tag=BVI2075_180066 NZ_CAJZAL010000090.1 Protein Homology CDS 67755 68810 . + 0 ID=cds-WP_011882253.1;Parent=gene-LDO38_RS07170;Dbxref=GenBank:WP_011882253.1;Name=WP_011882253.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752882.1;locus_tag=LDO38_RS07170;product=ABC transporter substrate-binding protein;protein_id=WP_011882253.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 68884 69879 . + . ID=gene-LDO38_RS07175;Name=LDO38_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07175;old_locus_tag=BVI2075_180067 NZ_CAJZAL010000090.1 Protein Homology CDS 68884 69879 . + 0 ID=cds-WP_059559671.1;Parent=gene-LDO38_RS07175;Dbxref=GenBank:WP_059559671.1;Name=WP_059559671.1;Ontology_term=GO:0006810,GO:0005215,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545453.1;locus_tag=LDO38_RS07175;product=ABC transporter ATP-binding protein;protein_id=WP_059559671.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 69876 70763 . + . ID=gene-LDO38_RS07180;Name=LDO38_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07180;old_locus_tag=BVI2075_180068 NZ_CAJZAL010000090.1 Protein Homology CDS 69876 70763 . + 0 ID=cds-WP_069246486.1;Parent=gene-LDO38_RS07180;Dbxref=GenBank:WP_069246486.1;Name=WP_069246486.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481264.1;locus_tag=LDO38_RS07180;product=ABC transporter permease;protein_id=WP_069246486.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 71060 72469 . - . ID=gene-LDO38_RS07185;Name=LDO38_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07185;old_locus_tag=BVI2075_180069 NZ_CAJZAL010000090.1 Protein Homology CDS 71060 72469 . - 0 ID=cds-WP_069246487.1;Parent=gene-LDO38_RS07185;Dbxref=GenBank:WP_069246487.1;Name=WP_069246487.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882250.1;locus_tag=LDO38_RS07185;product=PLP-dependent aminotransferase family protein;protein_id=WP_069246487.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 72682 72864 . + . ID=gene-LDO38_RS07190;Name=LDO38_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07190;old_locus_tag=BVI2075_180070 NZ_CAJZAL010000090.1 GeneMarkS-2+ CDS 72682 72864 . + 0 ID=cds-WP_014724869.1;Parent=gene-LDO38_RS07190;Dbxref=GenBank:WP_014724869.1;Name=WP_014724869.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS07190;product=hypothetical protein;protein_id=WP_014724869.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 72988 73629 . + . ID=gene-LDO38_RS07195;Name=LDO38_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07195;old_locus_tag=BVI2075_180071 NZ_CAJZAL010000090.1 Protein Homology CDS 72988 73629 . + 0 ID=cds-WP_011882249.1;Parent=gene-LDO38_RS07195;Dbxref=GenBank:WP_011882249.1;Name=WP_011882249.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882249.1;locus_tag=LDO38_RS07195;product=LysE family translocator;protein_id=WP_011882249.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq pseudogene 73635 73798 . - . ID=gene-LDO38_RS30160;Name=LDO38_RS30160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30160;old_locus_tag=BVI2075_180072;partial=true;pseudo=true;start_range=.,73635 NZ_CAJZAL010000090.1 Protein Homology CDS 73635 73798 . - 0 ID=cds-LDO38_RS30160;Parent=gene-LDO38_RS30160;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336742.1;locus_tag=LDO38_RS30160;partial=true;product=ISNCY family transposase;pseudo=true;start_range=.,73635;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 74024 75469 . - . ID=gene-LDO38_RS07200;Name=LDO38_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07200;old_locus_tag=BVI2075_180073 NZ_CAJZAL010000090.1 Protein Homology CDS 74024 75469 . - 0 ID=cds-WP_011882248.1;Parent=gene-LDO38_RS07200;Dbxref=GenBank:WP_011882248.1;Name=WP_011882248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397042.1;locus_tag=LDO38_RS07200;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_011882248.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 75627 76934 . - . ID=gene-LDO38_RS07205;Name=LDO38_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07205;old_locus_tag=BVI2075_180074 NZ_CAJZAL010000090.1 Protein Homology CDS 75627 76934 . - 0 ID=cds-WP_069246488.1;Parent=gene-LDO38_RS07205;Dbxref=GenBank:WP_069246488.1;Name=WP_069246488.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547691.1;locus_tag=LDO38_RS07205;product=c-type cytochrome;protein_id=WP_069246488.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 76949 79168 . - . ID=gene-LDO38_RS07210;Name=LDO38_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07210;old_locus_tag=BVI2075_180075 NZ_CAJZAL010000090.1 Protein Homology CDS 76949 79168 . - 0 ID=cds-WP_069246489.1;Parent=gene-LDO38_RS07210;Dbxref=GenBank:WP_069246489.1;Name=WP_069246489.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899380.1;locus_tag=LDO38_RS07210;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;protein_id=WP_069246489.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 79170 79625 . - . ID=gene-LDO38_RS07215;Name=LDO38_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07215;old_locus_tag=BVI2075_180076 NZ_CAJZAL010000090.1 Protein Homology CDS 79170 79625 . - 0 ID=cds-WP_011882245.1;Parent=gene-LDO38_RS07215;Dbxref=GenBank:WP_011882245.1;Name=WP_011882245.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882245.1;locus_tag=LDO38_RS07215;product=(2Fe-2S)-binding protein;protein_id=WP_011882245.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 79769 80068 . - . ID=gene-LDO38_RS07220;Name=LDO38_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07220;old_locus_tag=BVI2075_180077 NZ_CAJZAL010000090.1 Protein Homology CDS 79769 80068 . - 0 ID=cds-WP_011882244.1;Parent=gene-LDO38_RS07220;Dbxref=GenBank:WP_011882244.1;Name=WP_011882244.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479020.1;locus_tag=LDO38_RS07220;product=putative quinol monooxygenase;protein_id=WP_011882244.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 80154 81212 . - . ID=gene-LDO38_RS07225;Name=LDO38_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07225;old_locus_tag=BVI2075_180078 NZ_CAJZAL010000090.1 Protein Homology CDS 80154 81212 . - 0 ID=cds-WP_045578001.1;Parent=gene-LDO38_RS07225;Dbxref=GenBank:WP_045578001.1;Name=WP_045578001.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724874.1;locus_tag=LDO38_RS07225;product=NADP-dependent oxidoreductase;protein_id=WP_045578001.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 81400 82020 . - . ID=gene-LDO38_RS07230;Name=LDO38_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07230;old_locus_tag=BVI2075_180079 NZ_CAJZAL010000090.1 Protein Homology CDS 81400 82020 . - 0 ID=cds-WP_034195070.1;Parent=gene-LDO38_RS07230;Dbxref=GenBank:WP_034195070.1;Name=WP_034195070.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882242.1;locus_tag=LDO38_RS07230;product=TetR/AcrR family transcriptional regulator;protein_id=WP_034195070.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 82222 85383 . - . ID=gene-LDO38_RS07235;Name=LDO38_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07235;old_locus_tag=BVI2075_180080 NZ_CAJZAL010000090.1 Protein Homology CDS 82222 85383 . - 0 ID=cds-WP_224056292.1;Parent=gene-LDO38_RS07235;Dbxref=GenBank:WP_224056292.1;Name=WP_224056292.1;Ontology_term=GO:0042908,GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882241.1;locus_tag=LDO38_RS07235;product=multidrug efflux RND transporter permease subunit;protein_id=WP_224056292.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 85526 87175 . - . ID=gene-LDO38_RS07240;Name=LDO38_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07240;old_locus_tag=BVI2075_180081 NZ_CAJZAL010000090.1 Protein Homology CDS 85526 87175 . - 0 ID=cds-WP_060082341.1;Parent=gene-LDO38_RS07240;Dbxref=GenBank:WP_060082341.1;Name=WP_060082341.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882240.1;locus_tag=LDO38_RS07240;product=ABC transporter ATP-binding protein;protein_id=WP_060082341.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 87172 88305 . - . ID=gene-LDO38_RS07245;Name=LDO38_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07245;old_locus_tag=BVI2075_180082 NZ_CAJZAL010000090.1 Protein Homology CDS 87172 88305 . - 0 ID=cds-WP_212183635.1;Parent=gene-LDO38_RS07245;Dbxref=GenBank:WP_212183635.1;Name=WP_212183635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012432480.1;locus_tag=LDO38_RS07245;product=ABC transporter permease;protein_id=WP_212183635.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 88259 89311 . - . ID=gene-LDO38_RS07250;Name=LDO38_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07250;old_locus_tag=BVI2075_180083 NZ_CAJZAL010000090.1 Protein Homology CDS 88259 89311 . - 0 ID=cds-WP_011882238.1;Parent=gene-LDO38_RS07250;Dbxref=GenBank:WP_011882238.1;Name=WP_011882238.1;Ontology_term=GO:0042884,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=microcin transport|0042884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006475984.1;locus_tag=LDO38_RS07250;product=microcin C ABC transporter permease YejB;protein_id=WP_011882238.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 89325 91247 . - . ID=gene-LDO38_RS07255;Name=LDO38_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07255;old_locus_tag=BVI2075_180084 NZ_CAJZAL010000090.1 Protein Homology CDS 89325 91247 . - 0 ID=cds-WP_124259678.1;Parent=gene-LDO38_RS07255;Dbxref=GenBank:WP_124259678.1;Name=WP_124259678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724879.1;locus_tag=LDO38_RS07255;product=extracellular solute-binding protein;protein_id=WP_124259678.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 91422 94247 . - . ID=gene-LDO38_RS07260;Name=LDO38_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07260;old_locus_tag=BVI2075_180085 NZ_CAJZAL010000090.1 Protein Homology CDS 91422 94247 . - 0 ID=cds-WP_059474887.1;Parent=gene-LDO38_RS07260;Dbxref=GenBank:WP_059474887.1;Name=WP_059474887.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882236.1;locus_tag=LDO38_RS07260;product=TonB-dependent receptor;protein_id=WP_059474887.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 94593 95168 . - . ID=gene-LDO38_RS07265;Name=LDO38_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07265;old_locus_tag=BVI2075_180087 NZ_CAJZAL010000090.1 Protein Homology CDS 94593 95168 . - 0 ID=cds-WP_034195066.1;Parent=gene-LDO38_RS07265;Dbxref=GenBank:WP_034195066.1;Name=WP_034195066.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882235.1;locus_tag=LDO38_RS07265;product=helix-turn-helix domain-containing protein;protein_id=WP_034195066.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 95468 96658 . - . ID=gene-LDO38_RS07270;Name=LDO38_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07270;old_locus_tag=BVI2075_180088 NZ_CAJZAL010000090.1 Protein Homology CDS 95468 96658 . - 0 ID=cds-WP_069240216.1;Parent=gene-LDO38_RS07270;Dbxref=GenBank:WP_069240216.1;Name=WP_069240216.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492636.1;locus_tag=LDO38_RS07270;product=tetratricopeptide repeat protein;protein_id=WP_069240216.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 96675 97106 . - . ID=gene-LDO38_RS07275;Name=LDO38_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07275;old_locus_tag=BVI2075_180089 NZ_CAJZAL010000090.1 Protein Homology CDS 96675 97106 . - 0 ID=cds-WP_059460143.1;Parent=gene-LDO38_RS07275;Dbxref=GenBank:WP_059460143.1;Name=WP_059460143.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328556.1;locus_tag=LDO38_RS07275;product=ExbD/TolR family protein;protein_id=WP_059460143.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 97188 97610 . - . ID=gene-LDO38_RS07280;Name=LDO38_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07280;old_locus_tag=BVI2075_180090 NZ_CAJZAL010000090.1 Protein Homology CDS 97188 97610 . - 0 ID=cds-WP_045578008.1;Parent=gene-LDO38_RS07280;Dbxref=GenBank:WP_045578008.1;Name=WP_045578008.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017777874.1;locus_tag=LDO38_RS07280;product=ExbD/TolR family protein;protein_id=WP_045578008.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 97631 98536 . - . ID=gene-LDO38_RS07285;Name=LDO38_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07285;old_locus_tag=BVI2075_180091 NZ_CAJZAL010000090.1 Protein Homology CDS 97631 98536 . - 0 ID=cds-WP_011882231.1;Parent=gene-LDO38_RS07285;Dbxref=GenBank:WP_011882231.1;Name=WP_011882231.1;Ontology_term=GO:0015031,GO:0015252,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=proton channel activity|0015252||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328557.1;locus_tag=LDO38_RS07285;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_011882231.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 98623 99321 . - . ID=gene-LDO38_RS07290;Name=LDO38_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07290;old_locus_tag=BVI2075_180092 NZ_CAJZAL010000090.1 Protein Homology CDS 98623 99321 . - 0 ID=cds-WP_011882230.1;Parent=gene-LDO38_RS07290;Dbxref=GenBank:WP_011882230.1;Name=WP_011882230.1;Ontology_term=GO:0015031,GO:0015891,GO:0055085,GO:0031992,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=energy transducer activity|0031992||IEA;go_process=protein transport|0015031||IEA,siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481523.1;locus_tag=LDO38_RS07290;product=energy transducer TonB;protein_id=WP_011882230.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 99471 99791 . - . ID=gene-LDO38_RS07295;Name=LDO38_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07295 NZ_CAJZAL010000090.1 GeneMarkS-2+ CDS 99471 99791 . - 0 ID=cds-WP_131754177.1;Parent=gene-LDO38_RS07295;Dbxref=GenBank:WP_131754177.1;Name=WP_131754177.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS07295;product=hypothetical protein;protein_id=WP_131754177.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 100489 101424 . - . ID=gene-LDO38_RS07300;Name=LDO38_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07300;old_locus_tag=BVI2075_180095 NZ_CAJZAL010000090.1 Protein Homology CDS 100489 101424 . - 0 ID=cds-WP_011882227.1;Parent=gene-LDO38_RS07300;Dbxref=GenBank:WP_011882227.1;Name=WP_011882227.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882227.1;locus_tag=LDO38_RS07300;product=LysR family transcriptional regulator;protein_id=WP_011882227.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 101799 103235 . + . ID=gene-LDO38_RS07305;Name=LDO38_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07305;old_locus_tag=BVI2075_180096 NZ_CAJZAL010000090.1 Protein Homology CDS 101799 103235 . + 0 ID=cds-WP_011882226.1;Parent=gene-LDO38_RS07305;Dbxref=GenBank:WP_011882226.1;Name=WP_011882226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724883.1;locus_tag=LDO38_RS07305;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_011882226.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 103248 103625 . + . ID=gene-LDO38_RS07310;Name=LDO38_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07310;old_locus_tag=BVI2075_180097 NZ_CAJZAL010000090.1 Protein Homology CDS 103248 103625 . + 0 ID=cds-WP_034193545.1;Parent=gene-LDO38_RS07310;Dbxref=GenBank:WP_034193545.1;Name=WP_034193545.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882225.1;locus_tag=LDO38_RS07310;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_034193545.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 103622 104617 . + . ID=gene-LDO38_RS07315;Name=LDO38_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07315;old_locus_tag=BVI2075_180098 NZ_CAJZAL010000090.1 Protein Homology CDS 103622 104617 . + 0 ID=cds-WP_224056293.1;Parent=gene-LDO38_RS07315;Dbxref=GenBank:WP_224056293.1;Name=WP_224056293.1;Ontology_term=GO:0003960,GO:0048038,GO:0070402;gbkey=CDS;go_function=NADPH:quinone reductase activity|0003960||IEA,quinone binding|0048038||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882224.1;locus_tag=LDO38_RS07315;product=NAD(P)H-quinone oxidoreductase;protein_id=WP_224056293.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 104828 105028 . - . ID=gene-LDO38_RS07320;Name=LDO38_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07320 NZ_CAJZAL010000090.1 GeneMarkS-2+ CDS 104828 105028 . - 0 ID=cds-WP_043292230.1;Parent=gene-LDO38_RS07320;Dbxref=GenBank:WP_043292230.1;Name=WP_043292230.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS07320;product=hypothetical protein;protein_id=WP_043292230.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 105073 106341 . - . ID=gene-LDO38_RS07325;Name=LDO38_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07325;old_locus_tag=BVI2075_180099 NZ_CAJZAL010000090.1 Protein Homology CDS 105073 106341 . - 0 ID=cds-WP_011882223.1;Parent=gene-LDO38_RS07325;Dbxref=GenBank:WP_011882223.1;Name=WP_011882223.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882223.1;locus_tag=LDO38_RS07325;product=MFS transporter;protein_id=WP_011882223.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 106538 107635 . - . ID=gene-LDO38_RS07330;Name=LDO38_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07330;old_locus_tag=BVI2075_180100 NZ_CAJZAL010000090.1 Protein Homology CDS 106538 107635 . - 0 ID=cds-WP_011882222.1;Parent=gene-LDO38_RS07330;Dbxref=GenBank:WP_011882222.1;Name=WP_011882222.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882222.1;locus_tag=LDO38_RS07330;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_011882222.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 108012 109082 . + . ID=gene-LDO38_RS07335;Name=LDO38_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07335;old_locus_tag=BVI2075_180101 NZ_CAJZAL010000090.1 Protein Homology CDS 108012 109082 . + 0 ID=cds-WP_011882220.1;Parent=gene-LDO38_RS07335;Dbxref=GenBank:WP_011882220.1;Name=WP_011882220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882220.1;locus_tag=LDO38_RS07335;product=DUF1611 domain-containing protein;protein_id=WP_011882220.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 109150 110532 . + . ID=gene-LDO38_RS07340;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=LDO38_RS07340;old_locus_tag=BVI2075_180102 NZ_CAJZAL010000090.1 Protein Homology CDS 109150 110532 . + 0 ID=cds-WP_011882219.1;Parent=gene-LDO38_RS07340;Dbxref=GenBank:WP_011882219.1;Name=WP_011882219.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882219.1;locus_tag=LDO38_RS07340;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_011882219.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 110551 111426 . + . ID=gene-LDO38_RS07345;Name=LDO38_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07345;old_locus_tag=BVI2075_180103 NZ_CAJZAL010000090.1 Protein Homology CDS 110551 111426 . + 0 ID=cds-WP_011882218.1;Parent=gene-LDO38_RS07345;Dbxref=GenBank:WP_011882218.1;Name=WP_011882218.1;Ontology_term=GO:0046872,GO:0051213;gbkey=CDS;go_function=metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882218.1;locus_tag=LDO38_RS07345;product=phytanoyl-CoA dioxygenase family protein;protein_id=WP_011882218.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 111441 112568 . + . ID=gene-LDO38_RS07350;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=LDO38_RS07350;old_locus_tag=BVI2075_180104 NZ_CAJZAL010000090.1 Protein Homology CDS 111441 112568 . + 0 ID=cds-WP_034193541.1;Parent=gene-LDO38_RS07350;Dbxref=GenBank:WP_034193541.1;Name=WP_034193541.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724888.1;locus_tag=LDO38_RS07350;product=histidinol-phosphate transaminase;protein_id=WP_034193541.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 112631 113809 . + . ID=gene-LDO38_RS07355;Name=LDO38_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07355;old_locus_tag=BVI2075_180105 NZ_CAJZAL010000090.1 Protein Homology CDS 112631 113809 . + 0 ID=cds-WP_230939549.1;Parent=gene-LDO38_RS07355;Dbxref=GenBank:WP_230939549.1;Name=WP_230939549.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882216.1;locus_tag=LDO38_RS07355;product=ATP-grasp domain-containing protein;protein_id=WP_230939549.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 113820 115181 . + . ID=gene-LDO38_RS07360;Name=LDO38_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07360;old_locus_tag=BVI2075_180106 NZ_CAJZAL010000090.1 Protein Homology CDS 113820 115181 . + 0 ID=cds-WP_059894984.1;Parent=gene-LDO38_RS07360;Dbxref=GenBank:WP_059894984.1;Name=WP_059894984.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882215.1;locus_tag=LDO38_RS07360;product=ATP-grasp domain-containing protein;protein_id=WP_059894984.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 115178 115921 . + . ID=gene-LDO38_RS07365;Name=LDO38_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07365;old_locus_tag=BVI2075_180107 NZ_CAJZAL010000090.1 Protein Homology CDS 115178 115921 . + 0 ID=cds-WP_011882214.1;Parent=gene-LDO38_RS07365;Dbxref=GenBank:WP_011882214.1;Name=WP_011882214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882214.1;locus_tag=LDO38_RS07365;product=iron-containing redox enzyme family protein;protein_id=WP_011882214.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 115943 116224 . + . ID=gene-LDO38_RS07370;Name=LDO38_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07370;old_locus_tag=BVI2075_180108 NZ_CAJZAL010000090.1 Protein Homology CDS 115943 116224 . + 0 ID=cds-WP_011882213.1;Parent=gene-LDO38_RS07370;Dbxref=GenBank:WP_011882213.1;Name=WP_011882213.1;Ontology_term=GO:0009055,GO:0051537;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882213.1;locus_tag=LDO38_RS07370;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_011882213.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 116238 116831 . + . ID=gene-LDO38_RS07375;Name=ssuE;gbkey=Gene;gene=ssuE;gene_biotype=protein_coding;locus_tag=LDO38_RS07375;old_locus_tag=BVI2075_180109 NZ_CAJZAL010000090.1 Protein Homology CDS 116238 116831 . + 0 ID=cds-WP_011882212.1;Parent=gene-LDO38_RS07375;Dbxref=GenBank:WP_011882212.1;Name=WP_011882212.1;Ontology_term=GO:0046306,GO:0008752;gbkey=CDS;gene=ssuE;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA;go_process=alkanesulfonate catabolic process|0046306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882212.1;locus_tag=LDO38_RS07375;product=NADPH-dependent FMN reductase;protein_id=WP_011882212.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 116821 117804 . - . ID=gene-LDO38_RS07380;Name=LDO38_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07380;old_locus_tag=BVI2075_180110 NZ_CAJZAL010000090.1 Protein Homology CDS 116821 117804 . - 0 ID=cds-WP_014724891.1;Parent=gene-LDO38_RS07380;Dbxref=GenBank:WP_014724891.1;Name=WP_014724891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724891.1;locus_tag=LDO38_RS07380;product=HTH-type transcriptional regulator ArgP;protein_id=WP_014724891.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 118232 118732 . - . ID=gene-LDO38_RS07385;Name=LDO38_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07385;old_locus_tag=BVI2075_180112 NZ_CAJZAL010000090.1 Protein Homology CDS 118232 118732 . - 0 ID=cds-WP_034193539.1;Parent=gene-LDO38_RS07385;Dbxref=GenBank:WP_034193539.1;Name=WP_034193539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724892.1;locus_tag=LDO38_RS07385;product=lipocalin-like domain-containing protein;protein_id=WP_034193539.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 118891 119781 . + . ID=gene-LDO38_RS07390;Name=LDO38_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07390;old_locus_tag=BVI2075_180113 NZ_CAJZAL010000090.1 Protein Homology CDS 118891 119781 . + 0 ID=cds-WP_014724893.1;Parent=gene-LDO38_RS07390;Dbxref=GenBank:WP_014724893.1;Name=WP_014724893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724893.1;locus_tag=LDO38_RS07390;product=LysR substrate-binding domain-containing protein;protein_id=WP_014724893.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 120064 120480 . + . ID=gene-LDO38_RS07395;Name=LDO38_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07395;old_locus_tag=BVI2075_180114 NZ_CAJZAL010000090.1 Protein Homology CDS 120064 120480 . + 0 ID=cds-WP_046426541.1;Parent=gene-LDO38_RS07395;Dbxref=GenBank:WP_046426541.1;Name=WP_046426541.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724894.1;locus_tag=LDO38_RS07395;product=helix-turn-helix domain-containing protein;protein_id=WP_046426541.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 120483 121814 . + . ID=gene-LDO38_RS07400;Name=LDO38_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07400;old_locus_tag=BVI2075_180115 NZ_CAJZAL010000090.1 Protein Homology CDS 120483 121814 . + 0 ID=cds-WP_069240210.1;Parent=gene-LDO38_RS07400;Dbxref=GenBank:WP_069240210.1;Name=WP_069240210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882207.1;locus_tag=LDO38_RS07400;product=type II toxin-antitoxin system HipA family toxin;protein_id=WP_069240210.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 122123 123250 . - . ID=gene-LDO38_RS07405;Name=LDO38_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07405;old_locus_tag=BVI2075_180116 NZ_CAJZAL010000090.1 Protein Homology CDS 122123 123250 . - 0 ID=cds-WP_011882206.1;Parent=gene-LDO38_RS07405;Dbxref=GenBank:WP_011882206.1;Name=WP_011882206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658813.1;locus_tag=LDO38_RS07405;product=4-hydroxyphenylpyruvate dioxygenase family protein;protein_id=WP_011882206.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 123604 124911 . + . ID=gene-LDO38_RS07410;Name=shiA;gbkey=Gene;gene=shiA;gene_biotype=protein_coding;locus_tag=LDO38_RS07410;old_locus_tag=BVI2075_180117 NZ_CAJZAL010000090.1 Protein Homology CDS 123604 124911 . + 0 ID=cds-WP_011882205.1;Parent=gene-LDO38_RS07410;Dbxref=GenBank:WP_011882205.1;Name=WP_011882205.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=shiA;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355229.1;locus_tag=LDO38_RS07410;product=shikimate transporter;protein_id=WP_011882205.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 125137 126438 . + . ID=gene-LDO38_RS07415;Name=LDO38_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07415;old_locus_tag=BVI2075_180118 NZ_CAJZAL010000090.1 Protein Homology CDS 125137 126438 . + 0 ID=cds-WP_059474895.1;Parent=gene-LDO38_RS07415;Dbxref=GenBank:WP_059474895.1;Name=WP_059474895.1;Ontology_term=GO:0007049,GO:0008360,GO:0009252,GO:0019277,GO:0051301,GO:0071555,GO:0008760;gbkey=CDS;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=cell cycle|0007049||IEA,regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198657.1;locus_tag=LDO38_RS07415;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_059474895.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 126620 127390 . + . ID=gene-LDO38_RS07420;Name=LDO38_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07420;old_locus_tag=BVI2075_180119 NZ_CAJZAL010000090.1 Protein Homology CDS 126620 127390 . + 0 ID=cds-WP_011882203.1;Parent=gene-LDO38_RS07420;Dbxref=GenBank:WP_011882203.1;Name=WP_011882203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899400.1;locus_tag=LDO38_RS07420;product=IclR family transcriptional regulator domain-containing protein;protein_id=WP_011882203.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 127415 129724 . - . ID=gene-LDO38_RS07425;Name=LDO38_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07425;old_locus_tag=BVI2075_180120 NZ_CAJZAL010000090.1 Protein Homology CDS 127415 129724 . - 0 ID=cds-WP_059474896.1;Parent=gene-LDO38_RS07425;Dbxref=GenBank:WP_059474896.1;Name=WP_059474896.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355233.1;locus_tag=LDO38_RS07425;product=ATP-dependent DNA helicase;protein_id=WP_059474896.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 129721 131418 . - . ID=gene-LDO38_RS07430;Name=LDO38_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07430;old_locus_tag=BVI2075_180121 NZ_CAJZAL010000090.1 Protein Homology CDS 129721 131418 . - 0 ID=cds-WP_069246492.1;Parent=gene-LDO38_RS07430;Dbxref=GenBank:WP_069246492.1;Name=WP_069246492.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012340033.1;locus_tag=LDO38_RS07430;product=VRR-NUC domain-containing protein;protein_id=WP_069246492.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 131528 132406 . - . ID=gene-LDO38_RS07435;Name=LDO38_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07435;old_locus_tag=BVI2075_180122 NZ_CAJZAL010000090.1 Protein Homology CDS 131528 132406 . - 0 ID=cds-WP_045578020.1;Parent=gene-LDO38_RS07435;Dbxref=GenBank:WP_045578020.1;Name=WP_045578020.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658806.1;locus_tag=LDO38_RS07435;product=MipA/OmpV family protein;protein_id=WP_045578020.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 132628 132939 . - . ID=gene-LDO38_RS07440;Name=LDO38_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07440;old_locus_tag=BVI2075_180123 NZ_CAJZAL010000090.1 Protein Homology CDS 132628 132939 . - 0 ID=cds-WP_011882199.1;Parent=gene-LDO38_RS07440;Dbxref=GenBank:WP_011882199.1;Name=WP_011882199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750981.1;locus_tag=LDO38_RS07440;product=hypothetical protein;protein_id=WP_011882199.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 134242 134673 . + . ID=gene-LDO38_RS07445;Name=LDO38_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07445;old_locus_tag=BVI2075_180125 NZ_CAJZAL010000090.1 Protein Homology CDS 134242 134673 . + 0 ID=cds-WP_011882196.1;Parent=gene-LDO38_RS07445;Dbxref=GenBank:WP_011882196.1;Name=WP_011882196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899408.1;locus_tag=LDO38_RS07445;product=CBS domain-containing protein;protein_id=WP_011882196.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 134721 135227 . + . ID=gene-LDO38_RS07450;Name=LDO38_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07450;old_locus_tag=BVI2075_180126 NZ_CAJZAL010000090.1 Protein Homology CDS 134721 135227 . + 0 ID=cds-WP_069240206.1;Parent=gene-LDO38_RS07450;Dbxref=GenBank:WP_069240206.1;Name=WP_069240206.1;Ontology_term=GO:0019684,GO:0009055;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;go_process=photosynthesis%2C light reaction|0019684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724906.1;locus_tag=LDO38_RS07450;product=PRC-barrel domain-containing protein;protein_id=WP_069240206.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 135243 135884 . - . ID=gene-LDO38_RS07455;Name=LDO38_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07455;old_locus_tag=BVI2075_180127 NZ_CAJZAL010000090.1 Protein Homology CDS 135243 135884 . - 0 ID=cds-WP_059696220.1;Parent=gene-LDO38_RS07455;Dbxref=GenBank:WP_059696220.1;Name=WP_059696220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882194.1;locus_tag=LDO38_RS07455;product=DUF4142 domain-containing protein;protein_id=WP_059696220.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 136140 136568 . - . ID=gene-LDO38_RS07460;Name=LDO38_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07460;old_locus_tag=BVI2075_180128 NZ_CAJZAL010000090.1 Protein Homology CDS 136140 136568 . - 0 ID=cds-WP_014724908.1;Parent=gene-LDO38_RS07460;Dbxref=GenBank:WP_014724908.1;Name=WP_014724908.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491223.1;locus_tag=LDO38_RS07460;product=BON domain-containing protein;protein_id=WP_014724908.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 136605 138593 . - . ID=gene-LDO38_RS07465;Name=LDO38_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07465;old_locus_tag=BVI2075_180130 NZ_CAJZAL010000090.1 Protein Homology CDS 136605 138593 . - 0 ID=cds-WP_069240205.1;Parent=gene-LDO38_RS07465;Dbxref=GenBank:WP_069240205.1;Name=WP_069240205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882192.1;locus_tag=LDO38_RS07465;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_069240205.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 139010 139984 . + . ID=gene-LDO38_RS07470;Name=LDO38_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07470;old_locus_tag=BVI2075_180132 NZ_CAJZAL010000090.1 Protein Homology CDS 139010 139984 . + 0 ID=cds-WP_059990799.1;Parent=gene-LDO38_RS07470;Dbxref=GenBank:WP_059990799.1;Name=WP_059990799.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882191.1;locus_tag=LDO38_RS07470;product=sigma-54 interaction domain-containing protein;protein_id=WP_059990799.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 140028 141827 . - . ID=gene-LDO38_RS07475;Name=LDO38_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07475;old_locus_tag=BVI2075_180133 NZ_CAJZAL010000090.1 Protein Homology CDS 140028 141827 . - 0 ID=cds-WP_014724910.1;Parent=gene-LDO38_RS07475;Dbxref=GenBank:WP_014724910.1;Name=WP_014724910.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355245.1;locus_tag=LDO38_RS07475;product=methyl-accepting chemotaxis protein;protein_id=WP_014724910.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 142000 142254 . - . ID=gene-LDO38_RS07480;Name=LDO38_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07480;old_locus_tag=BVI2075_180134 NZ_CAJZAL010000090.1 Protein Homology CDS 142000 142254 . - 0 ID=cds-WP_011882189.1;Parent=gene-LDO38_RS07480;Dbxref=GenBank:WP_011882189.1;Name=WP_011882189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882189.1;locus_tag=LDO38_RS07480;product=DUF3562 domain-containing protein;protein_id=WP_011882189.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 142867 143277 . + . ID=gene-LDO38_RS07485;Name=LDO38_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07485;old_locus_tag=BVI2075_180135 NZ_CAJZAL010000090.1 Protein Homology CDS 142867 143277 . + 0 ID=cds-WP_011882187.1;Parent=gene-LDO38_RS07485;Dbxref=GenBank:WP_011882187.1;Name=WP_011882187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882187.1;locus_tag=LDO38_RS07485;product=hypothetical protein;protein_id=WP_011882187.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 143742 144677 . - . ID=gene-LDO38_RS07490;Name=LDO38_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07490;old_locus_tag=BVI2075_180136 NZ_CAJZAL010000090.1 Protein Homology CDS 143742 144677 . - 0 ID=cds-WP_224056294.1;Parent=gene-LDO38_RS07490;Dbxref=GenBank:WP_224056294.1;Name=WP_224056294.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882186.1;locus_tag=LDO38_RS07490;product=universal stress protein;protein_id=WP_224056294.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 145033 145908 . - . ID=gene-LDO38_RS07495;Name=LDO38_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07495;old_locus_tag=BVI2075_180138 NZ_CAJZAL010000090.1 Protein Homology CDS 145033 145908 . - 0 ID=cds-WP_011882185.1;Parent=gene-LDO38_RS07495;Dbxref=GenBank:WP_011882185.1;Name=WP_011882185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882185.1;locus_tag=LDO38_RS07495;product=hypothetical protein;protein_id=WP_011882185.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 146749 147780 . - . ID=gene-LDO38_RS07500;Name=LDO38_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07500;old_locus_tag=BVI2075_180140 NZ_CAJZAL010000090.1 Protein Homology CDS 146749 147780 . - 0 ID=cds-WP_014724915.1;Parent=gene-LDO38_RS07500;Dbxref=GenBank:WP_014724915.1;Name=WP_014724915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012340050.1;locus_tag=LDO38_RS07500;product=DedA family protein/thiosulfate sulfurtransferase GlpE;protein_id=WP_014724915.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 147932 148438 . - . ID=gene-LDO38_RS07505;Name=LDO38_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07505;old_locus_tag=BVI2075_180141 NZ_CAJZAL010000090.1 Protein Homology CDS 147932 148438 . - 0 ID=cds-WP_014724916.1;Parent=gene-LDO38_RS07505;Dbxref=GenBank:WP_014724916.1;Name=WP_014724916.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366041.1;locus_tag=LDO38_RS07505;product=cupin domain-containing protein;protein_id=WP_014724916.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 148778 149242 . - . ID=gene-LDO38_RS07510;Name=LDO38_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07510;old_locus_tag=BVI2075_180142 NZ_CAJZAL010000090.1 Protein Homology CDS 148778 149242 . - 0 ID=cds-WP_011882181.1;Parent=gene-LDO38_RS07510;Dbxref=GenBank:WP_011882181.1;Name=WP_011882181.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882181.1;locus_tag=LDO38_RS07510;product=universal stress protein;protein_id=WP_011882181.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 149550 151643 . + . ID=gene-LDO38_RS07515;Name=LDO38_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07515;old_locus_tag=BVI2075_180143 NZ_CAJZAL010000090.1 Protein Homology CDS 149550 151643 . + 0 ID=cds-WP_046426567.1;Parent=gene-LDO38_RS07515;Dbxref=GenBank:WP_046426567.1;Name=WP_046426567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479053.1;locus_tag=LDO38_RS07515;product=PAS domain-containing sensor histidine kinase;protein_id=WP_046426567.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 151640 152287 . + . ID=gene-LDO38_RS07520;Name=LDO38_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07520;old_locus_tag=BVI2075_180144 NZ_CAJZAL010000090.1 Protein Homology CDS 151640 152287 . + 0 ID=cds-WP_011882179.1;Parent=gene-LDO38_RS07520;Dbxref=GenBank:WP_011882179.1;Name=WP_011882179.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329510.1;locus_tag=LDO38_RS07520;product=response regulator;protein_id=WP_011882179.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 152297 152701 . - . ID=gene-LDO38_RS07525;Name=LDO38_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07525;old_locus_tag=BVI2075_180145 NZ_CAJZAL010000090.1 Protein Homology CDS 152297 152701 . - 0 ID=cds-WP_059454243.1;Parent=gene-LDO38_RS07525;Dbxref=GenBank:WP_059454243.1;Name=WP_059454243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899422.1;locus_tag=LDO38_RS07525;product=lysozyme inhibitor LprI family protein;protein_id=WP_059454243.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 152979 153308 . - . ID=gene-LDO38_RS07530;Name=LDO38_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07530;old_locus_tag=BVI2075_180146 NZ_CAJZAL010000090.1 Protein Homology CDS 152979 153308 . - 0 ID=cds-WP_069246493.1;Parent=gene-LDO38_RS07530;Dbxref=GenBank:WP_069246493.1;Name=WP_069246493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547733.1;locus_tag=LDO38_RS07530;product=DUF4148 domain-containing protein;protein_id=WP_069246493.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 153865 156396 . - . ID=gene-LDO38_RS07535;Name=LDO38_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07535;old_locus_tag=BVI2075_180147 NZ_CAJZAL010000090.1 Protein Homology CDS 153865 156396 . - 0 ID=cds-WP_165487638.1;Parent=gene-LDO38_RS07535;Dbxref=GenBank:WP_165487638.1;Name=WP_165487638.1;Ontology_term=GO:0006508,GO:0009252,GO:0008658,GO:0008955,GO:0009002;gbkey=CDS;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882176.1;locus_tag=LDO38_RS07535;product=penicillin-binding protein 1A;protein_id=WP_165487638.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 156904 157641 . - . ID=gene-LDO38_RS07540;Name=LDO38_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07540;old_locus_tag=BVI2075_180149 NZ_CAJZAL010000090.1 Protein Homology CDS 156904 157641 . - 0 ID=cds-WP_014724920.1;Parent=gene-LDO38_RS07540;Dbxref=GenBank:WP_014724920.1;Name=WP_014724920.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355264.1;locus_tag=LDO38_RS07540;product=FadR/GntR family transcriptional regulator;protein_id=WP_014724920.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 157904 158839 . + . ID=gene-LDO38_RS07545;Name=lhpI;gbkey=Gene;gene=lhpI;gene_biotype=protein_coding;locus_tag=LDO38_RS07545;old_locus_tag=BVI2075_180150 NZ_CAJZAL010000090.1 Protein Homology CDS 157904 158839 . + 0 ID=cds-WP_059461060.1;Parent=gene-LDO38_RS07545;Dbxref=GenBank:WP_059461060.1;Name=WP_059461060.1;Ontology_term=GO:0047125,GO:0050241;gbkey=CDS;gene=lhpI;go_function=delta1-piperideine-2-carboxylate reductase activity|0047125||IEA,pyrroline-2-carboxylate reductase activity|0050241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899432.1;locus_tag=LDO38_RS07545;product=bifunctional Delta(1)-pyrroline-2-carboxylate/Delta(1)-piperideine-2-carboxylate reductase;protein_id=WP_059461060.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 159037 159444 . + . ID=gene-LDO38_RS07550;Name=LDO38_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07550;old_locus_tag=BVI2075_180148 NZ_CAJZAL010000090.1 Protein Homology CDS 159037 159444 . + 0 ID=cds-WP_014724922.1;Parent=gene-LDO38_RS07550;Dbxref=GenBank:WP_014724922.1;Name=WP_014724922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759295.1;locus_tag=LDO38_RS07550;product=response regulator transcription factor;protein_id=WP_014724922.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 159462 160241 . + . ID=gene-LDO38_RS07555;Name=LDO38_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07555;old_locus_tag=BVI2075_180152 NZ_CAJZAL010000090.1 Protein Homology CDS 159462 160241 . + 0 ID=cds-WP_011882172.1;Parent=gene-LDO38_RS07555;Dbxref=GenBank:WP_011882172.1;Name=WP_011882172.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765894.1;locus_tag=LDO38_RS07555;product=helix-turn-helix domain-containing protein;protein_id=WP_011882172.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 160297 160647 . - . ID=gene-LDO38_RS07560;Name=LDO38_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07560;old_locus_tag=BVI2075_180153 NZ_CAJZAL010000090.1 Protein Homology CDS 160297 160647 . - 0 ID=cds-WP_011882171.1;Parent=gene-LDO38_RS07560;Dbxref=GenBank:WP_011882171.1;Name=WP_011882171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012340063.1;locus_tag=LDO38_RS07560;product=hypothetical protein;protein_id=WP_011882171.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 160756 160995 . - . ID=gene-LDO38_RS07565;Name=LDO38_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07565;old_locus_tag=BVI2075_180154 NZ_CAJZAL010000090.1 Protein Homology CDS 160756 160995 . - 0 ID=cds-WP_059454249.1;Parent=gene-LDO38_RS07565;Dbxref=GenBank:WP_059454249.1;Name=WP_059454249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479066.1;locus_tag=LDO38_RS07565;product=hypothetical protein;protein_id=WP_059454249.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 161012 161302 . - . ID=gene-LDO38_RS07570;Name=LDO38_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07570;old_locus_tag=BVI2075_180155 NZ_CAJZAL010000090.1 Protein Homology CDS 161012 161302 . - 0 ID=cds-WP_011882169.1;Parent=gene-LDO38_RS07570;Dbxref=GenBank:WP_011882169.1;Name=WP_011882169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479067.1;locus_tag=LDO38_RS07570;product=DUF1488 domain-containing protein;protein_id=WP_011882169.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 161417 161815 . - . ID=gene-LDO38_RS07575;Name=LDO38_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07575;old_locus_tag=BVI2075_180156 NZ_CAJZAL010000090.1 Protein Homology CDS 161417 161815 . - 0 ID=cds-WP_014724925.1;Parent=gene-LDO38_RS07575;Dbxref=GenBank:WP_014724925.1;Name=WP_014724925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724925.1;locus_tag=LDO38_RS07575;product=DUF488 domain-containing protein;protein_id=WP_014724925.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 161967 163169 . - . ID=gene-LDO38_RS07580;Name=LDO38_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07580;old_locus_tag=BVI2075_180158 NZ_CAJZAL010000090.1 Protein Homology CDS 161967 163169 . - 0 ID=cds-WP_011882167.1;Parent=gene-LDO38_RS07580;Dbxref=GenBank:WP_011882167.1;Name=WP_011882167.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752666.1;locus_tag=LDO38_RS07580;product=amino acid aminotransferase;protein_id=WP_011882167.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 163216 164601 . - . ID=gene-LDO38_RS07585;Name=LDO38_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07585;old_locus_tag=BVI2075_180159 NZ_CAJZAL010000090.1 Protein Homology CDS 163216 164601 . - 0 ID=cds-WP_011882166.1;Parent=gene-LDO38_RS07585;Dbxref=GenBank:WP_011882166.1;Name=WP_011882166.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329535.1;locus_tag=LDO38_RS07585;product=amino acid permease;protein_id=WP_011882166.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 164918 165391 . + . ID=gene-LDO38_RS07590;Name=LDO38_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07590;old_locus_tag=BVI2075_180160 NZ_CAJZAL010000090.1 Protein Homology CDS 164918 165391 . + 0 ID=cds-WP_011882165.1;Parent=gene-LDO38_RS07590;Dbxref=GenBank:WP_011882165.1;Name=WP_011882165.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329536.1;locus_tag=LDO38_RS07590;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011882165.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 165422 166279 . - . ID=gene-LDO38_RS07595;Name=LDO38_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07595;old_locus_tag=BVI2075_180161 NZ_CAJZAL010000090.1 Protein Homology CDS 165422 166279 . - 0 ID=cds-WP_034193558.1;Parent=gene-LDO38_RS07595;Dbxref=GenBank:WP_034193558.1;Name=WP_034193558.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415252.1;locus_tag=LDO38_RS07595;product=EamA family transporter;protein_id=WP_034193558.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 166684 168357 . + . ID=gene-LDO38_RS07600;Name=LDO38_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07600;old_locus_tag=BVI2075_180162 NZ_CAJZAL010000090.1 Protein Homology CDS 166684 168357 . + 0 ID=cds-WP_011882163.1;Parent=gene-LDO38_RS07600;Dbxref=GenBank:WP_011882163.1;Name=WP_011882163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882163.1;locus_tag=LDO38_RS07600;product=phospholipase C;protein_id=WP_011882163.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 168460 169878 . + . ID=gene-LDO38_RS07605;Name=LDO38_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07605;old_locus_tag=BVI2075_180163 NZ_CAJZAL010000090.1 Protein Homology CDS 168460 169878 . + 0 ID=cds-WP_011882162.1;Parent=gene-LDO38_RS07605;Dbxref=GenBank:WP_011882162.1;Name=WP_011882162.1;Ontology_term=GO:0004130,GO:0016491,GO:0020037;gbkey=CDS;go_function=cytochrome-c peroxidase activity|0004130||IEA,oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752659.1;locus_tag=LDO38_RS07605;product=cytochrome-c peroxidase;protein_id=WP_011882162.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 169919 170650 . - . ID=gene-LDO38_RS07610;Name=LDO38_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07610;old_locus_tag=BVI2075_180164 NZ_CAJZAL010000090.1 Protein Homology CDS 169919 170650 . - 0 ID=cds-WP_069240189.1;Parent=gene-LDO38_RS07610;Dbxref=GenBank:WP_069240189.1;Name=WP_069240189.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882161.1;locus_tag=LDO38_RS07610;product=class I SAM-dependent methyltransferase;protein_id=WP_069240189.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 170739 172073 . - . ID=gene-LDO38_RS07615;Name=LDO38_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07615;old_locus_tag=BVI2075_180165 NZ_CAJZAL010000090.1 Protein Homology CDS 170739 172073 . - 0 ID=cds-WP_041494290.1;Parent=gene-LDO38_RS07615;Dbxref=GenBank:WP_041494290.1;Name=WP_041494290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547759.1;locus_tag=LDO38_RS07615;product=chloride channel protein;protein_id=WP_041494290.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 172245 173486 . - . ID=gene-LDO38_RS07620;Name=codA;gbkey=Gene;gene=codA;gene_biotype=protein_coding;locus_tag=LDO38_RS07620;old_locus_tag=BVI2075_180166 NZ_CAJZAL010000090.1 Protein Homology CDS 172245 173486 . - 0 ID=cds-WP_014724931.1;Parent=gene-LDO38_RS07620;Dbxref=GenBank:WP_014724931.1;Name=WP_014724931.1;Ontology_term=GO:0016810;gbkey=CDS;gene=codA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882159.1;locus_tag=LDO38_RS07620;product=cytosine deaminase;protein_id=WP_014724931.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 173557 174021 . - . ID=gene-LDO38_RS07625;Name=LDO38_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07625;old_locus_tag=BVI2075_180168 NZ_CAJZAL010000090.1 Protein Homology CDS 173557 174021 . - 0 ID=cds-WP_014724932.1;Parent=gene-LDO38_RS07625;Dbxref=GenBank:WP_014724932.1;Name=WP_014724932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724932.1;locus_tag=LDO38_RS07625;product=VOC family protein;protein_id=WP_014724932.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 174331 175473 . + . ID=gene-LDO38_RS07630;Name=LDO38_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07630;old_locus_tag=BVI2075_180167 NZ_CAJZAL010000090.1 Protein Homology CDS 174331 175473 . + 0 ID=cds-WP_011882157.1;Parent=gene-LDO38_RS07630;Dbxref=GenBank:WP_011882157.1;Name=WP_011882157.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338211.1;locus_tag=LDO38_RS07630;product=porin;protein_id=WP_011882157.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 175723 176025 . + . ID=gene-LDO38_RS07635;Name=LDO38_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07635;old_locus_tag=BVI2075_180170 NZ_CAJZAL010000090.1 Protein Homology CDS 175723 176025 . + 0 ID=cds-WP_034193520.1;Parent=gene-LDO38_RS07635;Dbxref=GenBank:WP_034193520.1;Name=WP_034193520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755817.1;locus_tag=LDO38_RS07635;product=DUF4148 domain-containing protein;protein_id=WP_034193520.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 176165 177118 . - . ID=gene-LDO38_RS07640;Name=LDO38_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07640;old_locus_tag=BVI2075_180171 NZ_CAJZAL010000090.1 Protein Homology CDS 176165 177118 . - 0 ID=cds-WP_011882155.1;Parent=gene-LDO38_RS07640;Dbxref=GenBank:WP_011882155.1;Name=WP_011882155.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658752.1;locus_tag=LDO38_RS07640;product=LysR family transcriptional regulator;protein_id=WP_011882155.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 177309 179492 . + . ID=gene-LDO38_RS07645;Name=LDO38_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07645;old_locus_tag=BVI2075_180172 NZ_CAJZAL010000090.1 Protein Homology CDS 177309 179492 . + 0 ID=cds-WP_011882154.1;Parent=gene-LDO38_RS07645;Dbxref=GenBank:WP_011882154.1;Name=WP_011882154.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882154.1;locus_tag=LDO38_RS07645;product=FUSC family protein;protein_id=WP_011882154.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 179660 179872 . + . ID=gene-LDO38_RS07650;Name=LDO38_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07650;old_locus_tag=BVI2075_180173 NZ_CAJZAL010000090.1 Protein Homology CDS 179660 179872 . + 0 ID=cds-WP_011882153.1;Parent=gene-LDO38_RS07650;Dbxref=GenBank:WP_011882153.1;Name=WP_011882153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754376.1;locus_tag=LDO38_RS07650;product=hypothetical protein;protein_id=WP_011882153.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 180087 180464 . - . ID=gene-LDO38_RS07655;Name=LDO38_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07655;old_locus_tag=BVI2075_180174 NZ_CAJZAL010000090.1 Protein Homology CDS 180087 180464 . - 0 ID=cds-WP_069240181.1;Parent=gene-LDO38_RS07655;Dbxref=GenBank:WP_069240181.1;Name=WP_069240181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482852.1;locus_tag=LDO38_RS07655;product=nuclear transport factor 2 family protein;protein_id=WP_069240181.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 180705 181589 . + . ID=gene-LDO38_RS07660;Name=LDO38_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07660;old_locus_tag=BVI2075_180175 NZ_CAJZAL010000090.1 Protein Homology CDS 180705 181589 . + 0 ID=cds-WP_069246601.1;Parent=gene-LDO38_RS07660;Dbxref=GenBank:WP_069246601.1;Name=WP_069246601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329558.1;locus_tag=LDO38_RS07660;product=LysR substrate-binding domain-containing protein;protein_id=WP_069246601.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 181733 182659 . + . ID=gene-LDO38_RS07665;Name=LDO38_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07665;old_locus_tag=BVI2075_180176 NZ_CAJZAL010000090.1 Protein Homology CDS 181733 182659 . + 0 ID=cds-WP_011882150.1;Parent=gene-LDO38_RS07665;Dbxref=GenBank:WP_011882150.1;Name=WP_011882150.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724938.1;locus_tag=LDO38_RS07665;product=AEC family transporter;protein_id=WP_011882150.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 183206 183580 . + . ID=gene-LDO38_RS07670;Name=LDO38_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07670;old_locus_tag=BVI2075_180178 NZ_CAJZAL010000090.1 Protein Homology CDS 183206 183580 . + 0 ID=cds-WP_014724939.1;Parent=gene-LDO38_RS07670;Dbxref=GenBank:WP_014724939.1;Name=WP_014724939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479101.1;locus_tag=LDO38_RS07670;product=COG4315 family predicted lipoprotein;protein_id=WP_014724939.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 183716 185233 . - . ID=gene-LDO38_RS07675;Name=LDO38_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07675;old_locus_tag=BVI2075_180179 NZ_CAJZAL010000090.1 Protein Homology CDS 183716 185233 . - 0 ID=cds-WP_034193517.1;Parent=gene-LDO38_RS07675;Dbxref=GenBank:WP_034193517.1;Name=WP_034193517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366001.1;locus_tag=LDO38_RS07675;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_034193517.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 185308 186666 . - . ID=gene-LDO38_RS07680;Name=LDO38_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07680;old_locus_tag=BVI2075_180180 NZ_CAJZAL010000090.1 Protein Homology CDS 185308 186666 . - 0 ID=cds-WP_069246494.1;Parent=gene-LDO38_RS07680;Dbxref=GenBank:WP_069246494.1;Name=WP_069246494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329565.1;locus_tag=LDO38_RS07680;product=aspartate aminotransferase family protein;protein_id=WP_069246494.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 186772 187740 . + . ID=gene-LDO38_RS07685;Name=LDO38_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07685;old_locus_tag=BVI2075_180181 NZ_CAJZAL010000090.1 Protein Homology CDS 186772 187740 . + 0 ID=cds-WP_011882146.1;Parent=gene-LDO38_RS07685;Dbxref=GenBank:WP_011882146.1;Name=WP_011882146.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882146.1;locus_tag=LDO38_RS07685;product=LysR family transcriptional regulator;protein_id=WP_011882146.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 187919 188410 . + . ID=gene-LDO38_RS07690;Name=LDO38_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07690;old_locus_tag=BVI2075_180182 NZ_CAJZAL010000090.1 Protein Homology CDS 187919 188410 . + 0 ID=cds-WP_011882145.1;Parent=gene-LDO38_RS07690;Dbxref=GenBank:WP_011882145.1;Name=WP_011882145.1;Ontology_term=GO:0016702,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of two atoms of oxygen|0016702||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547776.1;locus_tag=LDO38_RS07690;product=2%2C4'-dihydroxyacetophenone dioxygenase family protein;protein_id=WP_011882145.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 188498 189646 . - . ID=gene-LDO38_RS07695;Name=LDO38_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07695;old_locus_tag=BVI2075_180183 NZ_CAJZAL010000090.1 Protein Homology CDS 188498 189646 . - 0 ID=cds-WP_069240177.1;Parent=gene-LDO38_RS07695;Dbxref=GenBank:WP_069240177.1;Name=WP_069240177.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479109.1;locus_tag=LDO38_RS07695;product=epoxide hydrolase family protein;protein_id=WP_069240177.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 189721 190683 . - . ID=gene-LDO38_RS07700;Name=LDO38_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07700;old_locus_tag=BVI2075_180184 NZ_CAJZAL010000090.1 Protein Homology CDS 189721 190683 . - 0 ID=cds-WP_059463836.1;Parent=gene-LDO38_RS07700;Dbxref=GenBank:WP_059463836.1;Name=WP_059463836.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765860.1;locus_tag=LDO38_RS07700;product=GlxA family transcriptional regulator;protein_id=WP_059463836.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 190832 191632 . + . ID=gene-LDO38_RS07705;Name=LDO38_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07705;old_locus_tag=BVI2075_180185 NZ_CAJZAL010000090.1 Protein Homology CDS 190832 191632 . + 0 ID=cds-WP_034193514.1;Parent=gene-LDO38_RS07705;Dbxref=GenBank:WP_034193514.1;Name=WP_034193514.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762186.1;locus_tag=LDO38_RS07705;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_034193514.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 191655 193028 . - . ID=gene-LDO38_RS07710;Name=LDO38_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07710;old_locus_tag=BVI2075_180186 NZ_CAJZAL010000090.1 Protein Homology CDS 191655 193028 . - 0 ID=cds-WP_014724945.1;Parent=gene-LDO38_RS07710;Dbxref=GenBank:WP_014724945.1;Name=WP_014724945.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762187.1;locus_tag=LDO38_RS07710;product=MFS transporter;protein_id=WP_014724945.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 193186 194145 . - . ID=gene-LDO38_RS07715;Name=LDO38_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07715;old_locus_tag=BVI2075_180188 NZ_CAJZAL010000090.1 Protein Homology CDS 193186 194145 . - 0 ID=cds-WP_046426636.1;Parent=gene-LDO38_RS07715;Dbxref=GenBank:WP_046426636.1;Name=WP_046426636.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018422163.1;locus_tag=LDO38_RS07715;product=MBL fold metallo-hydrolase;protein_id=WP_046426636.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 194323 195966 . + . ID=gene-LDO38_RS07720;Name=LDO38_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07720;old_locus_tag=BVI2075_180187 NZ_CAJZAL010000090.1 Protein Homology CDS 194323 195966 . + 0 ID=cds-WP_069246495.1;Parent=gene-LDO38_RS07720;Dbxref=GenBank:WP_069246495.1;Name=WP_069246495.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882139.1;locus_tag=LDO38_RS07720;product=IclR family transcriptional regulator;protein_id=WP_069246495.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 196639 197121 . - . ID=gene-LDO38_RS07725;Name=LDO38_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07725;old_locus_tag=BVI2075_180192 NZ_CAJZAL010000090.1 Protein Homology CDS 196639 197121 . - 0 ID=cds-WP_011882138.1;Parent=gene-LDO38_RS07725;Dbxref=GenBank:WP_011882138.1;Name=WP_011882138.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010098798.1;locus_tag=LDO38_RS07725;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011882138.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 197403 198050 . + . ID=gene-LDO38_RS07730;Name=LDO38_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07730;old_locus_tag=BVI2075_180193 NZ_CAJZAL010000090.1 Protein Homology CDS 197403 198050 . + 0 ID=cds-WP_059474318.1;Parent=gene-LDO38_RS07730;Dbxref=GenBank:WP_059474318.1;Name=WP_059474318.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547783.1;locus_tag=LDO38_RS07730;product=LysE family translocator;protein_id=WP_059474318.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 198746 199000 . + . ID=gene-LDO38_RS07735;Name=LDO38_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07735 NZ_CAJZAL010000090.1 Protein Homology CDS 198746 199000 . + 0 ID=cds-WP_072465343.1;Parent=gene-LDO38_RS07735;Dbxref=GenBank:WP_072465343.1;Name=WP_072465343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697968.1;locus_tag=LDO38_RS07735;product=hypothetical protein;protein_id=WP_072465343.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 199389 199820 . + . ID=gene-LDO38_RS07740;Name=LDO38_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07740;old_locus_tag=BVI2075_180198 NZ_CAJZAL010000090.1 Protein Homology CDS 199389 199820 . + 0 ID=cds-WP_011882135.1;Parent=gene-LDO38_RS07740;Dbxref=GenBank:WP_011882135.1;Name=WP_011882135.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882135.1;locus_tag=LDO38_RS07740;product=YqaA family protein;protein_id=WP_011882135.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 199966 201948 . + . ID=gene-LDO38_RS07745;Name=LDO38_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07745;old_locus_tag=BVI2075_180199 NZ_CAJZAL010000090.1 Protein Homology CDS 199966 201948 . + 0 ID=cds-WP_045578036.1;Parent=gene-LDO38_RS07745;Dbxref=GenBank:WP_045578036.1;Name=WP_045578036.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397154.1;locus_tag=LDO38_RS07745;product=methyl-accepting chemotaxis protein;protein_id=WP_045578036.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 201988 203640 . - . ID=gene-LDO38_RS07750;Name=LDO38_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07750;old_locus_tag=BVI2075_180200 NZ_CAJZAL010000090.1 Protein Homology CDS 201988 203640 . - 0 ID=cds-WP_034193507.1;Parent=gene-LDO38_RS07750;Dbxref=GenBank:WP_034193507.1;Name=WP_034193507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547786.1;locus_tag=LDO38_RS07750;product=acyl-CoA synthetase;protein_id=WP_034193507.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 203808 204668 . + . ID=gene-LDO38_RS07755;Name=LDO38_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07755;old_locus_tag=BVI2075_180201 NZ_CAJZAL010000090.1 Protein Homology CDS 203808 204668 . + 0 ID=cds-WP_418219569.1;Parent=gene-LDO38_RS07755;Dbxref=GenBank:WP_418219569.1;Name=WP_418219569.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760008.1;locus_tag=LDO38_RS07755;product=Crp/Fnr family transcriptional regulator;protein_id=WP_418219569.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 204970 205665 . + . ID=gene-LDO38_RS07760;Name=LDO38_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07760;old_locus_tag=BVI2075_180203 NZ_CAJZAL010000090.1 Protein Homology CDS 204970 205665 . + 0 ID=cds-WP_034193554.1;Parent=gene-LDO38_RS07760;Dbxref=GenBank:WP_034193554.1;Name=WP_034193554.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882131.1;locus_tag=LDO38_RS07760;product=heavy metal response regulator transcription factor;protein_id=WP_034193554.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 205662 207104 . + . ID=gene-LDO38_RS07765;Name=LDO38_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07765;old_locus_tag=BVI2075_180202 NZ_CAJZAL010000090.1 Protein Homology CDS 205662 207104 . + 0 ID=cds-WP_045578037.1;Parent=gene-LDO38_RS07765;Dbxref=GenBank:WP_045578037.1;Name=WP_045578037.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882130.1;locus_tag=LDO38_RS07765;product=heavy metal sensor histidine kinase;protein_id=WP_045578037.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 207199 207795 . + . ID=gene-LDO38_RS07770;Name=LDO38_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07770;old_locus_tag=BVI2075_180204 NZ_CAJZAL010000090.1 Protein Homology CDS 207199 207795 . + 0 ID=cds-WP_011882129.1;Parent=gene-LDO38_RS07770;Dbxref=GenBank:WP_011882129.1;Name=WP_011882129.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403632.1;locus_tag=LDO38_RS07770;product=LysE family translocator;protein_id=WP_011882129.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 207853 208701 . - . ID=gene-LDO38_RS07775;Name=LDO38_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07775;old_locus_tag=BVI2075_180205 NZ_CAJZAL010000090.1 Protein Homology CDS 207853 208701 . - 0 ID=cds-WP_011882128.1;Parent=gene-LDO38_RS07775;Dbxref=GenBank:WP_011882128.1;Name=WP_011882128.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755616.1;locus_tag=LDO38_RS07775;product=AraC family transcriptional regulator;protein_id=WP_011882128.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 208861 209655 . + . ID=gene-LDO38_RS07780;Name=LDO38_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07780;old_locus_tag=BVI2075_180206 NZ_CAJZAL010000090.1 Protein Homology CDS 208861 209655 . + 0 ID=cds-WP_014724956.1;Parent=gene-LDO38_RS07780;Dbxref=GenBank:WP_014724956.1;Name=WP_014724956.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603553.1;locus_tag=LDO38_RS07780;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_014724956.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 209716 210090 . - . ID=gene-LDO38_RS07785;Name=LDO38_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07785;old_locus_tag=BVI2075_180207 NZ_CAJZAL010000090.1 Protein Homology CDS 209716 210090 . - 0 ID=cds-WP_011882126.1;Parent=gene-LDO38_RS07785;Dbxref=GenBank:WP_011882126.1;Name=WP_011882126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494939.1;locus_tag=LDO38_RS07785;product=hypothetical protein;protein_id=WP_011882126.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 210312 211382 . - . ID=gene-LDO38_RS07790;Name=LDO38_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07790;old_locus_tag=BVI2075_180209 NZ_CAJZAL010000090.1 Protein Homology CDS 210312 211382 . - 0 ID=cds-WP_014724958.1;Parent=gene-LDO38_RS07790;Dbxref=GenBank:WP_014724958.1;Name=WP_014724958.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485660.1;locus_tag=LDO38_RS07790;product=AI-2E family transporter;protein_id=WP_014724958.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 211522 212631 . - . ID=gene-LDO38_RS07795;Name=LDO38_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07795;old_locus_tag=BVI2075_180210 NZ_CAJZAL010000090.1 Protein Homology CDS 211522 212631 . - 0 ID=cds-WP_014724959.1;Parent=gene-LDO38_RS07795;Dbxref=GenBank:WP_014724959.1;Name=WP_014724959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494940.1;locus_tag=LDO38_RS07795;product=NADH:flavin oxidoreductase/NADH oxidase;protein_id=WP_014724959.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 212780 213466 . - . ID=gene-LDO38_RS07800;Name=LDO38_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07800;old_locus_tag=BVI2075_180211 NZ_CAJZAL010000090.1 Protein Homology CDS 212780 213466 . - 0 ID=cds-WP_011882123.1;Parent=gene-LDO38_RS07800;Dbxref=GenBank:WP_011882123.1;Name=WP_011882123.1;Ontology_term=GO:0019172;gbkey=CDS;go_function=glyoxalase III activity|0019172||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397181.1;locus_tag=LDO38_RS07800;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_011882123.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 213890 214903 . - . ID=gene-LDO38_RS07805;Name=LDO38_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07805;old_locus_tag=BVI2075_180212 NZ_CAJZAL010000090.1 Protein Homology CDS 213890 214903 . - 0 ID=cds-WP_059463798.1;Parent=gene-LDO38_RS07805;Dbxref=GenBank:WP_059463798.1;Name=WP_059463798.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882122.1;locus_tag=LDO38_RS07805;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_059463798.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 215086 216666 . + . ID=gene-LDO38_RS07810;Name=LDO38_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07810;old_locus_tag=BVI2075_180213 NZ_CAJZAL010000090.1 Protein Homology CDS 215086 216666 . + 0 ID=cds-WP_045578040.1;Parent=gene-LDO38_RS07810;Dbxref=GenBank:WP_045578040.1;Name=WP_045578040.1;Ontology_term=GO:0009758,GO:0050053;gbkey=CDS;go_function=levansucrase activity|0050053||IEA;go_process=carbohydrate utilization|0009758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658715.1;locus_tag=LDO38_RS07810;product=glycoside hydrolase family 68 protein;protein_id=WP_045578040.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 216821 218467 . + . ID=gene-LDO38_RS07815;Name=LDO38_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07815;old_locus_tag=BVI2075_180214 NZ_CAJZAL010000090.1 Protein Homology CDS 216821 218467 . + 0 ID=cds-WP_014724962.1;Parent=gene-LDO38_RS07815;Dbxref=GenBank:WP_014724962.1;Name=WP_014724962.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724962.1;locus_tag=LDO38_RS07815;product=glycoside hydrolase family 32 protein;protein_id=WP_014724962.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 218524 219273 . - . ID=gene-LDO38_RS07820;Name=LDO38_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07820;old_locus_tag=BVI2075_180215 NZ_CAJZAL010000090.1 Protein Homology CDS 218524 219273 . - 0 ID=cds-WP_041494144.1;Parent=gene-LDO38_RS07820;Dbxref=GenBank:WP_041494144.1;Name=WP_041494144.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338255.1;locus_tag=LDO38_RS07820;product=SDR family oxidoreductase;protein_id=WP_041494144.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 219417 220334 . - . ID=gene-LDO38_RS07825;Name=LDO38_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07825;old_locus_tag=BVI2075_180217 NZ_CAJZAL010000090.1 Protein Homology CDS 219417 220334 . - 0 ID=cds-WP_011882118.1;Parent=gene-LDO38_RS07825;Dbxref=GenBank:WP_011882118.1;Name=WP_011882118.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365969.1;locus_tag=LDO38_RS07825;product=LysR family transcriptional regulator;protein_id=WP_011882118.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 220572 222053 . + . ID=gene-LDO38_RS07830;Name=LDO38_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07830;old_locus_tag=BVI2075_180216 NZ_CAJZAL010000090.1 Protein Homology CDS 220572 222053 . + 0 ID=cds-WP_060081355.1;Parent=gene-LDO38_RS07830;Dbxref=GenBank:WP_060081355.1;Name=WP_060081355.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485811.1;locus_tag=LDO38_RS07830;product=PLP-dependent aminotransferase family protein;protein_id=WP_060081355.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 222148 222585 . + . ID=gene-LDO38_RS07835;Name=LDO38_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07835;old_locus_tag=BVI2075_180218 NZ_CAJZAL010000090.1 Protein Homology CDS 222148 222585 . + 0 ID=cds-WP_045578043.1;Parent=gene-LDO38_RS07835;Dbxref=GenBank:WP_045578043.1;Name=WP_045578043.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099649.1;locus_tag=LDO38_RS07835;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_045578043.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 222596 223021 . + . ID=gene-LDO38_RS07840;Name=LDO38_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07840;old_locus_tag=BVI2075_180219 NZ_CAJZAL010000090.1 Protein Homology CDS 222596 223021 . + 0 ID=cds-WP_059621730.1;Parent=gene-LDO38_RS07840;Dbxref=GenBank:WP_059621730.1;Name=WP_059621730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882115.1;locus_tag=LDO38_RS07840;product=cupin domain-containing protein;protein_id=WP_059621730.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 223122 224318 . - . ID=gene-LDO38_RS07845;Name=LDO38_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07845;old_locus_tag=BVI2075_180220 NZ_CAJZAL010000090.1 Protein Homology CDS 223122 224318 . - 0 ID=cds-WP_011882114.1;Parent=gene-LDO38_RS07845;Dbxref=GenBank:WP_011882114.1;Name=WP_011882114.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365962.1;locus_tag=LDO38_RS07845;product=porin;protein_id=WP_011882114.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 224822 225889 . - . ID=gene-LDO38_RS07850;Name=LDO38_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07850;old_locus_tag=BVI2075_180222 NZ_CAJZAL010000090.1 Protein Homology CDS 224822 225889 . - 0 ID=cds-WP_059461074.1;Parent=gene-LDO38_RS07850;Dbxref=GenBank:WP_059461074.1;Name=WP_059461074.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882113.1;locus_tag=LDO38_RS07850;product=phytoene/squalene synthase family protein;protein_id=WP_059461074.1;transl_table=11 NZ_CAJZAL010000090.1 RefSeq gene 226119 226603 . - . ID=gene-LDO38_RS07855;Name=LDO38_RS07855;end_range=226603,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07855;old_locus_tag=BVI2075_180223;partial=true NZ_CAJZAL010000090.1 Protein Homology CDS 226119 226603 . - 2 ID=cds-WP_253074552.1;Parent=gene-LDO38_RS07855;Dbxref=GenBank:WP_253074552.1;Name=WP_253074552.1;end_range=226603,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365959.1;locus_tag=LDO38_RS07855;partial=true;product=rhodanese-like domain-containing protein;protein_id=WP_253074552.1;transl_table=11 ##sequence-region NZ_CAJZAL010000091.1 1 951 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000091.1 RefSeq region 1 951 . + . ID=NZ_CAJZAL010000091.1:1..951;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_180 NZ_CAJZAL010000091.1 RefSeq gene 1 352 . + . ID=gene-LDO38_RS07860;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=LDO38_RS07860;old_locus_tag=BVI2075_1800001;partial=true;start_range=.,1 NZ_CAJZAL010000091.1 Protein Homology CDS 1 352 . + 1 ID=cds-WP_224056296.1;Parent=gene-LDO38_RS07860;Dbxref=GenBank:WP_224056296.1;Name=WP_224056296.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486838.1;locus_tag=LDO38_RS07860;partial=true;product=50S ribosomal protein L19;protein_id=WP_224056296.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000091.1 RefSeq pseudogene 521 763 . + . ID=gene-LDO38_RS07865;Name=LDO38_RS07865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS07865;old_locus_tag=BVI2075_1800002;partial=true;pseudo=true;start_range=.,521 NZ_CAJZAL010000091.1 Protein Homology CDS 521 763 . + 0 ID=cds-LDO38_RS07865;Parent=gene-LDO38_RS07865;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486824.1;locus_tag=LDO38_RS07865;partial=true;product=coenzyme A pyrophosphatase;pseudo=true;start_range=.,521;transl_table=11 ##sequence-region NZ_CAJZAL010000092.1 1 644 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000092.1 RefSeq region 1 644 . + . ID=NZ_CAJZAL010000092.1:1..644;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_181 NZ_CAJZAL010000092.1 RefSeq gene 140 411 . + . ID=gene-LDO38_RS30445;Name=LDO38_RS30445;end_range=411,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30445;old_locus_tag=BVI2075_1810001;partial=true NZ_CAJZAL010000092.1 Protein Homology CDS 140 411 . + 0 ID=cds-WP_435520920.1;Parent=gene-LDO38_RS30445;Dbxref=GenBank:WP_435520920.1;Name=WP_435520920.1;Ontology_term=GO:0055085,GO:0022857;end_range=411,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656660.1;locus_tag=LDO38_RS30445;partial=true;product=MFS transporter;protein_id=WP_435520920.1;transl_table=11 NZ_CAJZAL010000092.1 RefSeq pseudogene 422 644 . + . ID=gene-LDO38_RS30450;Name=LDO38_RS30450;end_range=644,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30450;partial=true;pseudo=true;start_range=.,422 NZ_CAJZAL010000092.1 Protein Homology CDS 422 644 . + 0 ID=cds-LDO38_RS30450;Parent=gene-LDO38_RS30450;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=644,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491815.1;locus_tag=LDO38_RS30450;partial=true;product=MFS transporter;pseudo=true;start_range=.,422;transl_table=11 ##sequence-region NZ_CAJZAL010000093.1 1 852 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000093.1 RefSeq region 1 852 . + . ID=NZ_CAJZAL010000093.1:1..852;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_182 NZ_CAJZAL010000093.1 RefSeq gene 144 356 . - . ID=gene-LDO38_RS07880;Name=LDO38_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07880;old_locus_tag=BVI2075_1820001 NZ_CAJZAL010000093.1 Protein Homology CDS 144 356 . - 0 ID=cds-WP_014725152.1;Parent=gene-LDO38_RS07880;Dbxref=GenBank:WP_014725152.1;Name=WP_014725152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899787.1;locus_tag=LDO38_RS07880;product=hypothetical protein;protein_id=WP_014725152.1;transl_table=11 ##sequence-region NZ_CAJZAL010000094.1 1 1617 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000094.1 RefSeq region 1 1617 . + . ID=NZ_CAJZAL010000094.1:1..1617;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_183 NZ_CAJZAL010000094.1 RefSeq pseudogene 1 455 . - . ID=gene-LDO38_RS07885;Name=LDO38_RS07885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS07885;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000094.1 Protein Homology CDS 1 455 . - 0 ID=cds-LDO38_RS07885;Parent=gene-LDO38_RS07885;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486423.1;locus_tag=LDO38_RS07885;partial=true;product=CHAD domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000094.1 RefSeq gene 580 963 . - . ID=gene-LDO38_RS07890;Name=LDO38_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07890;old_locus_tag=BVI2075_1830002 NZ_CAJZAL010000094.1 Protein Homology CDS 580 963 . - 0 ID=cds-WP_011881563.1;Parent=gene-LDO38_RS07890;Dbxref=GenBank:WP_011881563.1;Name=WP_011881563.1;Ontology_term=GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479459.1;locus_tag=LDO38_RS07890;product=tautomerase family protein;protein_id=WP_011881563.1;transl_table=11 NZ_CAJZAL010000094.1 RefSeq gene 1074 1617 . + . ID=gene-LDO38_RS07895;Name=LDO38_RS07895;end_range=1617,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07895;partial=true NZ_CAJZAL010000094.1 Protein Homology CDS 1074 1617 . + 0 ID=cds-WP_224056298.1;Parent=gene-LDO38_RS07895;Dbxref=GenBank:WP_224056298.1;Name=WP_224056298.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;end_range=1617,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190343.1;locus_tag=LDO38_RS07895;partial=true;product=LysR family transcriptional regulator;protein_id=WP_224056298.1;transl_table=11 ##sequence-region NZ_CAJZAL010000095.1 1 5837 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000095.1 RefSeq region 1 5837 . + . ID=NZ_CAJZAL010000095.1:1..5837;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_184 NZ_CAJZAL010000095.1 RefSeq pseudogene 1 260 . + . ID=gene-LDO38_RS07900;Name=LDO38_RS07900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS07900;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000095.1 Protein Homology CDS 1 260 . + 2 ID=cds-LDO38_RS07900;Parent=gene-LDO38_RS07900;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405009.1;locus_tag=LDO38_RS07900;partial=true;product=sodium:proton exchanger;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000095.1 RefSeq gene 309 701 . + . ID=gene-LDO38_RS07905;Name=LDO38_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07905;old_locus_tag=BVI2075_1840003 NZ_CAJZAL010000095.1 Protein Homology CDS 309 701 . + 0 ID=cds-WP_045579239.1;Parent=gene-LDO38_RS07905;Dbxref=GenBank:WP_045579239.1;Name=WP_045579239.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656589.1;locus_tag=LDO38_RS07905;product=OsmC family protein;protein_id=WP_045579239.1;transl_table=11 NZ_CAJZAL010000095.1 RefSeq gene 728 1612 . + . ID=gene-LDO38_RS07910;Name=LDO38_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07910;old_locus_tag=BVI2075_1840002 NZ_CAJZAL010000095.1 Protein Homology CDS 728 1612 . + 0 ID=cds-WP_011884398.1;Parent=gene-LDO38_RS07910;Dbxref=GenBank:WP_011884398.1;Name=WP_011884398.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722848.1;locus_tag=LDO38_RS07910;product=pirin family protein;protein_id=WP_011884398.1;transl_table=11 NZ_CAJZAL010000095.1 RefSeq gene 1668 1865 . - . ID=gene-LDO38_RS07915;Name=LDO38_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07915;old_locus_tag=BVI2075_1840004 NZ_CAJZAL010000095.1 Protein Homology CDS 1668 1865 . - 0 ID=cds-WP_069224083.1;Parent=gene-LDO38_RS07915;Dbxref=GenBank:WP_069224083.1;Name=WP_069224083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884396.1;locus_tag=LDO38_RS07915;product=hypothetical protein;protein_id=WP_069224083.1;transl_table=11 NZ_CAJZAL010000095.1 RefSeq gene 1847 3400 . - . ID=gene-LDO38_RS07920;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=LDO38_RS07920;old_locus_tag=BVI2075_1840005 NZ_CAJZAL010000095.1 Protein Homology CDS 1847 3400 . - 0 ID=cds-WP_059551318.1;Parent=gene-LDO38_RS07920;Dbxref=GenBank:WP_059551318.1;Name=WP_059551318.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004549777.1;locus_tag=LDO38_RS07920;product=cellulose biosynthesis protein BcsG;protein_id=WP_059551318.1;transl_table=11 NZ_CAJZAL010000095.1 RefSeq gene 3427 5837 . - . ID=gene-LDO38_RS07925;Name=bcsA;end_range=5837,.;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=LDO38_RS07925;old_locus_tag=BVI2075_1840006;partial=true NZ_CAJZAL010000095.1 Protein Homology CDS 3427 5837 . - 2 ID=cds-WP_224056299.1;Parent=gene-LDO38_RS07925;Dbxref=GenBank:WP_224056299.1;Name=WP_224056299.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;end_range=5837,.;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498997.1;locus_tag=LDO38_RS07925;partial=true;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_224056299.1;transl_table=11 ##sequence-region NZ_CAJZAL010000096.1 1 7203 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000096.1 RefSeq region 1 7203 . + . ID=NZ_CAJZAL010000096.1:1..7203;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_185 NZ_CAJZAL010000096.1 RefSeq gene 1 2117 . + . ID=gene-LDO38_RS07930;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=LDO38_RS07930;old_locus_tag=BVI2075_1850001;partial=true;start_range=.,1 NZ_CAJZAL010000096.1 Protein Homology CDS 1 2117 . + 2 ID=cds-WP_224056300.1;Parent=gene-LDO38_RS07930;Dbxref=GenBank:WP_224056300.1;Name=WP_224056300.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880556.1;locus_tag=LDO38_RS07930;partial=true;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_224056300.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000096.1 RefSeq gene 2119 6567 . + . ID=gene-LDO38_RS07935;Name=LDO38_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07935;old_locus_tag=BVI2075_1850002 NZ_CAJZAL010000096.1 Protein Homology CDS 2119 6567 . + 0 ID=cds-WP_224056301.1;Parent=gene-LDO38_RS07935;Dbxref=GenBank:WP_224056301.1;Name=WP_224056301.1;Ontology_term=GO:0030244,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880555.1;locus_tag=LDO38_RS07935;product=cellulose biosynthesis protein BcsC;protein_id=WP_224056301.1;transl_table=11 ##sequence-region NZ_CAJZAL010000097.1 1 4791 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000097.1 RefSeq region 1 4791 . + . ID=NZ_CAJZAL010000097.1:1..4791;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_186 NZ_CAJZAL010000097.1 RefSeq gene 1 1254 . - . ID=gene-LDO38_RS07940;Name=LDO38_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07940;partial=true;start_range=.,1 NZ_CAJZAL010000097.1 Protein Homology CDS 1 1254 . - 0 ID=cds-WP_224056302.1;Parent=gene-LDO38_RS07940;Dbxref=GenBank:WP_224056302.1;Name=WP_224056302.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882110.1;locus_tag=LDO38_RS07940;partial=true;product=acyl-CoA dehydrogenase family protein;protein_id=WP_224056302.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000097.1 RefSeq gene 1608 2693 . + . ID=gene-LDO38_RS07945;Name=LDO38_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07945;old_locus_tag=BVI2075_1860003 NZ_CAJZAL010000097.1 Protein Homology CDS 1608 2693 . + 0 ID=cds-WP_011882109.1;Parent=gene-LDO38_RS07945;Dbxref=GenBank:WP_011882109.1;Name=WP_011882109.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402355.1;locus_tag=LDO38_RS07945;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_011882109.1;transl_table=11 NZ_CAJZAL010000097.1 RefSeq gene 2714 3559 . + . ID=gene-LDO38_RS07950;Name=LDO38_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07950;old_locus_tag=BVI2075_1860004 NZ_CAJZAL010000097.1 Protein Homology CDS 2714 3559 . + 0 ID=cds-WP_011882108.1;Parent=gene-LDO38_RS07950;Dbxref=GenBank:WP_011882108.1;Name=WP_011882108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402356.1;locus_tag=LDO38_RS07950;product=class II aldolase/adducin family protein;protein_id=WP_011882108.1;transl_table=11 NZ_CAJZAL010000097.1 RefSeq gene 3597 4631 . + . ID=gene-LDO38_RS07955;Name=LDO38_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07955;old_locus_tag=BVI2075_1860005 NZ_CAJZAL010000097.1 Protein Homology CDS 3597 4631 . + 0 ID=cds-WP_224056303.1;Parent=gene-LDO38_RS07955;Dbxref=GenBank:WP_224056303.1;Name=WP_224056303.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365953.1;locus_tag=LDO38_RS07955;product=ABC transporter substrate-binding protein;protein_id=WP_224056303.1;transl_table=11 ##sequence-region NZ_CAJZAL010000098.1 1 5026 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000098.1 RefSeq region 1 5026 . + . ID=NZ_CAJZAL010000098.1:1..5026;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_187 NZ_CAJZAL010000098.1 RefSeq gene 1 1303 . - . ID=gene-LDO38_RS07960;Name=LDO38_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07960;partial=true;start_range=.,1 NZ_CAJZAL010000098.1 Protein Homology CDS 1 1303 . - 0 ID=cds-WP_224056304.1;Parent=gene-LDO38_RS07960;Dbxref=GenBank:WP_224056304.1;Name=WP_224056304.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886032.1;locus_tag=LDO38_RS07960;partial=true;product=MMPL family transporter;protein_id=WP_224056304.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000098.1 RefSeq gene 1300 1995 . - . ID=gene-LDO38_RS07965;Name=LDO38_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07965;old_locus_tag=BVI2075_1870002 NZ_CAJZAL010000098.1 Protein Homology CDS 1300 1995 . - 0 ID=cds-WP_407061790.1;Parent=gene-LDO38_RS07965;Dbxref=GenBank:WP_407061790.1;Name=WP_407061790.1;Ontology_term=GO:0042953,GO:0044874,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=lipoprotein transport|0042953||IEA,lipoprotein localization to outer membrane|0044874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723651.1;locus_tag=LDO38_RS07965;product=outer membrane lipoprotein carrier protein LolA;protein_id=WP_407061790.1;transl_table=11 NZ_CAJZAL010000098.1 RefSeq gene 1992 2966 . - . ID=gene-LDO38_RS07970;Name=LDO38_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07970;old_locus_tag=BVI2075_1870003 NZ_CAJZAL010000098.1 Protein Homology CDS 1992 2966 . - 0 ID=cds-WP_014723650.1;Parent=gene-LDO38_RS07970;Dbxref=GenBank:WP_014723650.1;Name=WP_014723650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723650.1;locus_tag=LDO38_RS07970;product=LpxL/LpxP family acyltransferase;protein_id=WP_014723650.1;transl_table=11 NZ_CAJZAL010000098.1 RefSeq gene 2963 4741 . - . ID=gene-LDO38_RS07975;Name=LDO38_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07975;old_locus_tag=BVI2075_1870004 NZ_CAJZAL010000098.1 Protein Homology CDS 2963 4741 . - 0 ID=cds-WP_224056305.1;Parent=gene-LDO38_RS07975;Dbxref=GenBank:WP_224056305.1;Name=WP_224056305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493463.1;locus_tag=LDO38_RS07975;product=AMP-binding protein;protein_id=WP_224056305.1;transl_table=11 NZ_CAJZAL010000098.1 RefSeq pseudogene 4794 5026 . - . ID=gene-LDO38_RS07980;Name=LDO38_RS07980;end_range=5026,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS07980;old_locus_tag=BVI2075_1870005;partial=true;pseudo=true NZ_CAJZAL010000098.1 Protein Homology CDS 4794 5026 . - 2 ID=cds-LDO38_RS07980;Parent=gene-LDO38_RS07980;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5026,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755108.1;locus_tag=LDO38_RS07980;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000099.1 1 538 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000099.1 RefSeq region 1 538 . + . ID=NZ_CAJZAL010000099.1:1..538;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_188 NZ_CAJZAL010000099.1 RefSeq pseudogene 1 104 . - . ID=gene-LDO38_RS07985;Name=LDO38_RS07985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS07985;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000099.1 Protein Homology CDS 1 104 . - 0 ID=cds-LDO38_RS07985;Parent=gene-LDO38_RS07985;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898487.1;locus_tag=LDO38_RS07985;partial=true;product=2-hydroxyacid dehydrogenase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000099.1 RefSeq gene 310 538 . + . ID=gene-LDO38_RS07990;Name=LDO38_RS07990;end_range=538,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS07990;partial=true;start_range=.,310 NZ_CAJZAL010000099.1 Protein Homology CDS 310 538 . + 1 ID=cds-WP_290371175.1;Parent=gene-LDO38_RS07990;Dbxref=GenBank:WP_290371175.1;Name=WP_290371175.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;end_range=538,.;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659504.1;locus_tag=LDO38_RS07990;partial=true;product=glycine betaine ABC transporter substrate-binding protein;protein_id=WP_290371175.1;start_range=.,310;transl_table=11 ##sequence-region NZ_CAJZAL010000100.1 1 968 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000100.1 RefSeq region 1 968 . + . ID=NZ_CAJZAL010000100.1:1..968;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_189 NZ_CAJZAL010000100.1 RefSeq pseudogene 1 225 . - . ID=gene-LDO38_RS07995;Name=LDO38_RS07995;end_range=225,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS07995;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000100.1 Protein Homology CDS 1 225 . - 0 ID=cds-LDO38_RS07995;Parent=gene-LDO38_RS07995;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=225,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725155.1;locus_tag=LDO38_RS07995;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000100.1 RefSeq gene 340 637 . - . ID=gene-LDO38_RS30455;Name=LDO38_RS30455;end_range=637,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30455;partial=true NZ_CAJZAL010000100.1 GeneMarkS-2+ CDS 340 637 . - 1 ID=cds-WP_435520921.1;Parent=gene-LDO38_RS30455;Dbxref=GenBank:WP_435520921.1;Name=WP_435520921.1;end_range=637,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30455;partial=true;product=hypothetical protein;protein_id=WP_435520921.1;transl_table=11 NZ_CAJZAL010000100.1 RefSeq pseudogene 804 968 . - . ID=gene-LDO38_RS30460;Name=LDO38_RS30460;end_range=968,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30460;old_locus_tag=BVI2075_1890003;partial=true;pseudo=true NZ_CAJZAL010000100.1 Protein Homology CDS 804 968 . - 0 ID=cds-LDO38_RS30460;Parent=gene-LDO38_RS30460;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=968,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011850889.1;locus_tag=LDO38_RS30460;partial=true;product=DUF4382 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000101.1 1 20908 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000101.1 RefSeq region 1 20908 . + . ID=NZ_CAJZAL010000101.1:1..20908;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_19 NZ_CAJZAL010000101.1 RefSeq pseudogene 1 111 . + . ID=gene-LDO38_RS08000;Name=LDO38_RS08000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS08000;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000101.1 Protein Homology CDS 1 111 . + 0 ID=cds-LDO38_RS08000;Parent=gene-LDO38_RS08000;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886219.1;locus_tag=LDO38_RS08000;partial=true;product=short-chain dehydrogenase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000101.1 RefSeq gene 191 595 . + . ID=gene-LDO38_RS08005;Name=LDO38_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08005;old_locus_tag=BVI2075_190002 NZ_CAJZAL010000101.1 Protein Homology CDS 191 595 . + 0 ID=cds-WP_034192505.1;Parent=gene-LDO38_RS08005;Dbxref=GenBank:WP_034192505.1;Name=WP_034192505.1;Ontology_term=GO:0046654,GO:0046656,GO:0004150;gbkey=CDS;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA,folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893357.1;locus_tag=LDO38_RS08005;product=dihydroneopterin aldolase;protein_id=WP_034192505.1;transl_table=11 NZ_CAJZAL010000101.1 RefSeq gene 592 1605 . + . ID=gene-LDO38_RS08010;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=LDO38_RS08010;old_locus_tag=BVI2075_190003 NZ_CAJZAL010000101.1 Protein Homology CDS 592 1605 . + 0 ID=cds-WP_014723781.1;Parent=gene-LDO38_RS08010;Dbxref=GenBank:WP_014723781.1;Name=WP_014723781.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214279.1;locus_tag=LDO38_RS08010;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_014723781.1;transl_table=11 NZ_CAJZAL010000101.1 RefSeq gene 1741 3102 . + . ID=gene-LDO38_RS08015;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=LDO38_RS08015;old_locus_tag=BVI2075_190004 NZ_CAJZAL010000101.1 Protein Homology CDS 1741 3102 . + 0 ID=cds-WP_034192503.1;Parent=gene-LDO38_RS08015;Dbxref=GenBank:WP_034192503.1;Name=WP_034192503.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134,GO:0005737;gbkey=CDS;gene=glmU;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353430.1;locus_tag=LDO38_RS08015;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_034192503.1;transl_table=11 NZ_CAJZAL010000101.1 RefSeq gene 3160 4977 . + . ID=gene-LDO38_RS08020;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LDO38_RS08020;old_locus_tag=BVI2075_190006 NZ_CAJZAL010000101.1 Protein Homology CDS 3160 4977 . + 0 ID=cds-WP_014723783.1;Parent=gene-LDO38_RS08020;Dbxref=GenBank:WP_014723783.1;Name=WP_014723783.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011000145.1;locus_tag=LDO38_RS08020;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_014723783.1;transl_table=11 NZ_CAJZAL010000101.1 RefSeq gene 5028 5504 . + . ID=gene-LDO38_RS08025;Name=LDO38_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08025;old_locus_tag=BVI2075_190007 NZ_CAJZAL010000101.1 Protein Homology CDS 5028 5504 . + 0 ID=cds-WP_034192502.1;Parent=gene-LDO38_RS08025;Dbxref=GenBank:WP_034192502.1;Name=WP_034192502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723784.1;locus_tag=LDO38_RS08025;product=hypothetical protein;protein_id=WP_034192502.1;transl_table=11 NZ_CAJZAL010000101.1 RefSeq gene 5504 5722 . + . ID=gene-LDO38_RS08030;Name=LDO38_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08030;old_locus_tag=BVI2075_190008 NZ_CAJZAL010000101.1 Protein Homology CDS 5504 5722 . + 0 ID=cds-WP_011886225.1;Parent=gene-LDO38_RS08030;Dbxref=GenBank:WP_011886225.1;Name=WP_011886225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334484.1;locus_tag=LDO38_RS08030;product=hypothetical protein;protein_id=WP_011886225.1;transl_table=11 NZ_CAJZAL010000101.1 RefSeq gene 5795 6631 . - . ID=gene-LDO38_RS08035;Name=LDO38_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08035;old_locus_tag=BVI2075_190009 NZ_CAJZAL010000101.1 Protein Homology CDS 5795 6631 . - 0 ID=cds-WP_011886226.1;Parent=gene-LDO38_RS08035;Dbxref=GenBank:WP_011886226.1;Name=WP_011886226.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090450.1;locus_tag=LDO38_RS08035;product=FTR1 family iron permease;protein_id=WP_011886226.1;transl_table=11 NZ_CAJZAL010000101.1 RefSeq gene 6644 6976 . - . ID=gene-LDO38_RS08040;Name=LDO38_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08040;old_locus_tag=BVI2075_190010 NZ_CAJZAL010000101.1 Protein Homology CDS 6644 6976 . - 0 ID=cds-WP_041493992.1;Parent=gene-LDO38_RS08040;Dbxref=GenBank:WP_041493992.1;Name=WP_041493992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407998.1;locus_tag=LDO38_RS08040;product=cupredoxin domain-containing protein;protein_id=WP_041493992.1;transl_table=11 NZ_CAJZAL010000101.1 RefSeq gene 7283 7483 . + . ID=gene-LDO38_RS08045;Name=LDO38_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08045;old_locus_tag=BVI2075_190012 NZ_CAJZAL010000101.1 Protein Homology CDS 7283 7483 . + 0 ID=cds-WP_011886228.1;Parent=gene-LDO38_RS08045;Dbxref=GenBank:WP_011886228.1;Name=WP_011886228.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364874.1;locus_tag=LDO38_RS08045;product=heavy-metal-associated domain-containing protein;protein_id=WP_011886228.1;transl_table=11 NZ_CAJZAL010000101.1 RefSeq gene 7533 9023 . - . ID=gene-LDO38_RS08050;Name=LDO38_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08050;old_locus_tag=BVI2075_190013 NZ_CAJZAL010000101.1 Protein Homology CDS 7533 9023 . - 0 ID=cds-WP_224056306.1;Parent=gene-LDO38_RS08050;Dbxref=GenBank:WP_224056306.1;Name=WP_224056306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010108095.1;locus_tag=LDO38_RS08050;product=aldehyde dehydrogenase;protein_id=WP_224056306.1;transl_table=11 NZ_CAJZAL010000101.1 RefSeq gene 9107 9658 . - . ID=gene-LDO38_RS08055;Name=LDO38_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08055;old_locus_tag=BVI2075_190014 NZ_CAJZAL010000101.1 Protein Homology CDS 9107 9658 . - 0 ID=cds-WP_011886230.1;Parent=gene-LDO38_RS08055;Dbxref=GenBank:WP_011886230.1;Name=WP_011886230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529988.1;locus_tag=LDO38_RS08055;product=cupin domain-containing protein;protein_id=WP_011886230.1;transl_table=11 NZ_CAJZAL010000101.1 RefSeq gene 10073 10297 . + . ID=gene-LDO38_RS08060;Name=LDO38_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08060;old_locus_tag=BVI2075_190015 NZ_CAJZAL010000101.1 Protein Homology CDS 10073 10297 . + 0 ID=cds-WP_011886231.1;Parent=gene-LDO38_RS08060;Dbxref=GenBank:WP_011886231.1;Name=WP_011886231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886231.1;locus_tag=LDO38_RS08060;product=hypothetical protein;protein_id=WP_011886231.1;transl_table=11 NZ_CAJZAL010000101.1 RefSeq gene 10580 11365 . + . ID=gene-LDO38_RS08065;Name=LDO38_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08065;old_locus_tag=BVI2075_190016 NZ_CAJZAL010000101.1 Protein Homology CDS 10580 11365 . + 0 ID=cds-WP_011886232.1;Parent=gene-LDO38_RS08065;Dbxref=GenBank:WP_011886232.1;Name=WP_011886232.1;Ontology_term=GO:0016787,GO:0016811;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895827.1;locus_tag=LDO38_RS08065;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_011886232.1;transl_table=11 NZ_CAJZAL010000101.1 RefSeq gene 11395 12732 . + . ID=gene-LDO38_RS08070;Name=LDO38_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08070;old_locus_tag=BVI2075_190017 NZ_CAJZAL010000101.1 Protein Homology CDS 11395 12732 . + 0 ID=cds-WP_011886233.1;Parent=gene-LDO38_RS08070;Dbxref=GenBank:WP_011886233.1;Name=WP_011886233.1;Ontology_term=GO:0006542,GO:0004356,GO:0005524,GO:0046872;gbkey=CDS;go_function=glutamine synthetase activity|0004356||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851914.1;locus_tag=LDO38_RS08070;product=glutamine synthetase family protein;protein_id=WP_011886233.1;transl_table=11 NZ_CAJZAL010000101.1 RefSeq gene 12770 14203 . + . ID=gene-LDO38_RS08075;Name=LDO38_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08075;old_locus_tag=BVI2075_190018 NZ_CAJZAL010000101.1 Protein Homology CDS 12770 14203 . + 0 ID=cds-WP_011886234.1;Parent=gene-LDO38_RS08075;Dbxref=GenBank:WP_011886234.1;Name=WP_011886234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334492.1;locus_tag=LDO38_RS08075;product=aspartate aminotransferase family protein;protein_id=WP_011886234.1;transl_table=11 NZ_CAJZAL010000101.1 RefSeq gene 14265 15380 . + . ID=gene-LDO38_RS08080;Name=LDO38_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08080;old_locus_tag=BVI2075_190019 NZ_CAJZAL010000101.1 Protein Homology CDS 14265 15380 . + 0 ID=cds-WP_224056307.1;Parent=gene-LDO38_RS08080;Dbxref=GenBank:WP_224056307.1;Name=WP_224056307.1;Ontology_term=GO:0015846,GO:0019808,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411182.1;locus_tag=LDO38_RS08080;product=polyamine ABC transporter substrate-binding protein;protein_id=WP_224056307.1;transl_table=11 NZ_CAJZAL010000101.1 RefSeq gene 15571 16725 . + . ID=gene-LDO38_RS08085;Name=LDO38_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08085;old_locus_tag=BVI2075_190020 NZ_CAJZAL010000101.1 Protein Homology CDS 15571 16725 . + 0 ID=cds-WP_014723792.1;Parent=gene-LDO38_RS08085;Dbxref=GenBank:WP_014723792.1;Name=WP_014723792.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017774051.1;locus_tag=LDO38_RS08085;product=ABC transporter ATP-binding protein;protein_id=WP_014723792.1;transl_table=11 NZ_CAJZAL010000101.1 RefSeq gene 16736 17722 . + . ID=gene-LDO38_RS08090;Name=LDO38_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08090;old_locus_tag=BVI2075_190021 NZ_CAJZAL010000101.1 Protein Homology CDS 16736 17722 . + 0 ID=cds-WP_041493993.1;Parent=gene-LDO38_RS08090;Dbxref=GenBank:WP_041493993.1;Name=WP_041493993.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546396.1;locus_tag=LDO38_RS08090;product=ABC transporter permease subunit;protein_id=WP_041493993.1;transl_table=11 NZ_CAJZAL010000101.1 RefSeq gene 17719 18558 . + . ID=gene-LDO38_RS08095;Name=LDO38_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08095;old_locus_tag=BVI2075_190022 NZ_CAJZAL010000101.1 Protein Homology CDS 17719 18558 . + 0 ID=cds-WP_011886238.1;Parent=gene-LDO38_RS08095;Dbxref=GenBank:WP_011886238.1;Name=WP_011886238.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760185.1;locus_tag=LDO38_RS08095;product=ABC transporter permease subunit;protein_id=WP_011886238.1;transl_table=11 NZ_CAJZAL010000101.1 RefSeq gene 18657 20249 . + . ID=gene-LDO38_RS08100;Name=LDO38_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08100;old_locus_tag=BVI2075_190023 NZ_CAJZAL010000101.1 Protein Homology CDS 18657 20249 . + 0 ID=cds-WP_011886239.1;Parent=gene-LDO38_RS08100;Dbxref=GenBank:WP_011886239.1;Name=WP_011886239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411185.1;locus_tag=LDO38_RS08100;product=DUF3138 family protein;protein_id=WP_011886239.1;transl_table=11 NZ_CAJZAL010000101.1 RefSeq gene 20362 20908 . + . ID=gene-LDO38_RS08105;Name=LDO38_RS08105;end_range=20908,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08105;partial=true NZ_CAJZAL010000101.1 Protein Homology CDS 20362 20908 . + 0 ID=cds-WP_224056308.1;Parent=gene-LDO38_RS08105;Dbxref=GenBank:WP_224056308.1;Name=WP_224056308.1;Ontology_term=GO:0016491,GO:0050660;end_range=20908,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495491.1;locus_tag=LDO38_RS08105;partial=true;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_224056308.1;transl_table=11 ##sequence-region NZ_CAJZAL010000102.1 1 3363 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000102.1 RefSeq region 1 3363 . + . ID=NZ_CAJZAL010000102.1:1..3363;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_190 NZ_CAJZAL010000102.1 RefSeq gene 1 780 . + . ID=gene-LDO38_RS08110;Name=LDO38_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08110;old_locus_tag=BVI2075_1900001;partial=true;start_range=.,1 NZ_CAJZAL010000102.1 Protein Homology CDS 1 780 . + 0 ID=cds-WP_224056309.1;Parent=gene-LDO38_RS08110;Dbxref=GenBank:WP_224056309.1;Name=WP_224056309.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725970.1;locus_tag=LDO38_RS08110;partial=true;product=alpha/beta hydrolase;protein_id=WP_224056309.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000102.1 RefSeq gene 863 2035 . - . ID=gene-LDO38_RS08115;Name=LDO38_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08115;old_locus_tag=BVI2075_1900002 NZ_CAJZAL010000102.1 Protein Homology CDS 863 2035 . - 0 ID=cds-WP_175992436.1;Parent=gene-LDO38_RS08115;Dbxref=GenBank:WP_175992436.1;Name=WP_175992436.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880329.1;locus_tag=LDO38_RS08115;product=porin;protein_id=WP_175992436.1;transl_table=11 NZ_CAJZAL010000102.1 RefSeq gene 2032 3363 . - . ID=gene-LDO38_RS08120;Name=LDO38_RS08120;end_range=3363,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08120;old_locus_tag=BVI2075_1900003;partial=true NZ_CAJZAL010000102.1 Protein Homology CDS 2032 3363 . - 0 ID=cds-WP_224056310.1;Parent=gene-LDO38_RS08120;Dbxref=GenBank:WP_224056310.1;Name=WP_224056310.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;end_range=3363,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725972.1;locus_tag=LDO38_RS08120;partial=true;product=FUSC family protein;protein_id=WP_224056310.1;transl_table=11 ##sequence-region NZ_CAJZAL010000103.1 1 769 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000103.1 RefSeq region 1 769 . + . ID=NZ_CAJZAL010000103.1:1..769;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_191 NZ_CAJZAL010000103.1 RefSeq gene 1 184 . - . ID=gene-LDO38_RS08125;Name=LDO38_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08125;partial=true;start_range=.,1 NZ_CAJZAL010000103.1 Protein Homology CDS 1 184 . - 0 ID=cds-WP_224056311.1;Parent=gene-LDO38_RS08125;Dbxref=GenBank:WP_224056311.1;Name=WP_224056311.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018433359.1;locus_tag=LDO38_RS08125;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_224056311.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000103.1 RefSeq gene 391 590 . + . ID=gene-LDO38_RS08130;Name=LDO38_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08130;old_locus_tag=BVI2075_1910002;partial=true;start_range=.,391 NZ_CAJZAL010000103.1 Protein Homology CDS 391 590 . + 2 ID=cds-WP_435520922.1;Parent=gene-LDO38_RS08130;Dbxref=GenBank:WP_435520922.1;Name=WP_435520922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351353.1;locus_tag=LDO38_RS08130;partial=true;product=Lrp/AsnC ligand binding domain-containing protein;protein_id=WP_435520922.1;start_range=.,391;transl_table=11 ##sequence-region NZ_CAJZAL010000104.1 1 4061 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000104.1 RefSeq region 1 4061 . + . ID=NZ_CAJZAL010000104.1:1..4061;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_192 NZ_CAJZAL010000104.1 RefSeq gene 1 1848 . + . ID=gene-LDO38_RS08135;Name=LDO38_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08135;old_locus_tag=BVI2075_1920001;partial=true;start_range=.,1 NZ_CAJZAL010000104.1 Protein Homology CDS 1 1848 . + 0 ID=cds-WP_224056312.1;Parent=gene-LDO38_RS08135;Dbxref=GenBank:WP_224056312.1;Name=WP_224056312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601071.1;locus_tag=LDO38_RS08135;partial=true;product=tetratricopeptide repeat protein;protein_id=WP_224056312.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000104.1 RefSeq gene 1881 2081 . + . ID=gene-LDO38_RS08140;Name=LDO38_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08140;old_locus_tag=BVI2075_1920002 NZ_CAJZAL010000104.1 GeneMarkS-2+ CDS 1881 2081 . + 0 ID=cds-WP_014725296.1;Parent=gene-LDO38_RS08140;Dbxref=GenBank:WP_014725296.1;Name=WP_014725296.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS08140;product=hypothetical protein;protein_id=WP_014725296.1;transl_table=11 NZ_CAJZAL010000104.1 RefSeq pseudogene 2160 3005 . - . ID=gene-LDO38_RS08145;Name=LDO38_RS08145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS08145;partial=true;pseudo=true;start_range=.,2160 NZ_CAJZAL010000104.1 Protein Homology CDS 2160 3005 . - 0 ID=cds-LDO38_RS08145;Parent=gene-LDO38_RS08145;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365959.1;locus_tag=LDO38_RS08145;partial=true;product=rhodanese-like domain-containing protein;pseudo=true;start_range=.,2160;transl_table=11 NZ_CAJZAL010000104.1 RefSeq gene 3100 3666 . - . ID=gene-LDO38_RS08150;Name=LDO38_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08150;old_locus_tag=BVI2075_1920003 NZ_CAJZAL010000104.1 Protein Homology CDS 3100 3666 . - 0 ID=cds-WP_014724967.1;Parent=gene-LDO38_RS08150;Dbxref=GenBank:WP_014724967.1;Name=WP_014724967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755516.1;locus_tag=LDO38_RS08150;product=cysteine dioxygenase;protein_id=WP_014724967.1;transl_table=11 NZ_CAJZAL010000104.1 RefSeq gene 3741 4061 . + . ID=gene-LDO38_RS08155;Name=LDO38_RS08155;end_range=4061,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08155;partial=true NZ_CAJZAL010000104.1 GeneMarkS-2+ CDS 3741 4061 . + 0 ID=cds-WP_224056313.1;Parent=gene-LDO38_RS08155;Dbxref=GenBank:WP_224056313.1;Name=WP_224056313.1;end_range=4061,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS08155;partial=true;product=hypothetical protein;protein_id=WP_224056313.1;transl_table=11 ##sequence-region NZ_CAJZAL010000105.1 1 5603 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000105.1 RefSeq region 1 5603 . + . ID=NZ_CAJZAL010000105.1:1..5603;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_193 NZ_CAJZAL010000105.1 RefSeq gene 1 2065 . + . ID=gene-LDO38_RS08160;Name=LDO38_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08160;old_locus_tag=BVI2075_1930001;partial=true;start_range=.,1 NZ_CAJZAL010000105.1 Protein Homology CDS 1 2065 . + 1 ID=cds-WP_224056314.1;Parent=gene-LDO38_RS08160;Dbxref=GenBank:WP_224056314.1;Name=WP_224056314.1;Ontology_term=GO:0009313,GO:0030979,GO:0004553,GO:0016758;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,hexosyltransferase activity|0016758||IEA;go_process=oligosaccharide catabolic process|0009313||IEA,alpha-glucan biosynthetic process|0030979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498311.1;locus_tag=LDO38_RS08160;partial=true;product=alpha-1%2C4-glucan--maltose-1-phosphate maltosyltransferase;protein_id=WP_224056314.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000105.1 RefSeq gene 2065 5475 . + . ID=gene-LDO38_RS08165;Name=treS;gbkey=Gene;gene=treS;gene_biotype=protein_coding;locus_tag=LDO38_RS08165;old_locus_tag=BVI2075_1930002 NZ_CAJZAL010000105.1 Protein Homology CDS 2065 5475 . + 0 ID=cds-WP_224056315.1;Parent=gene-LDO38_RS08165;Dbxref=GenBank:WP_224056315.1;Name=WP_224056315.1;Ontology_term=GO:0005991,GO:0047471;gbkey=CDS;gene=treS;go_function=maltose alpha-D-glucosyltransferase activity|0047471||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879950.1;locus_tag=LDO38_RS08165;product=maltose alpha-D-glucosyltransferase;protein_id=WP_224056315.1;transl_table=11 NZ_CAJZAL010000105.1 RefSeq gene 5472 5603 . + . ID=gene-LDO38_RS30465;Name=LDO38_RS30465;end_range=5603,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30465;partial=true NZ_CAJZAL010000105.1 Protein Homology CDS 5472 5603 . + 0 ID=cds-WP_372585799.1;Parent=gene-LDO38_RS30465;Dbxref=GenBank:WP_372585799.1;Name=WP_372585799.1;end_range=5603,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521799.1;locus_tag=LDO38_RS30465;partial=true;product=GlgB N-terminal domain-containing protein;protein_id=WP_372585799.1;transl_table=11 ##sequence-region NZ_CAJZAL010000106.1 1 730 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000106.1 RefSeq region 1 730 . + . ID=NZ_CAJZAL010000106.1:1..730;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_194 NZ_CAJZAL010000106.1 RefSeq gene 1 169 . + . ID=gene-LDO38_RS30165;Name=LDO38_RS30165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30165;old_locus_tag=BVI2075_1940001;partial=true;start_range=.,1 NZ_CAJZAL010000106.1 Protein Homology CDS 1 169 . + 1 ID=cds-WP_435520924.1;Parent=gene-LDO38_RS30165;Dbxref=GenBank:WP_435520924.1;Name=WP_435520924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881882.1;locus_tag=LDO38_RS30165;partial=true;product=alpha/beta fold hydrolase;protein_id=WP_435520924.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000106.1 RefSeq gene 273 483 . + . ID=gene-LDO38_RS30470;Name=LDO38_RS30470;end_range=483,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30470;old_locus_tag=BVI2075_1940003;partial=true NZ_CAJZAL010000106.1 Protein Homology CDS 273 483 . + 0 ID=cds-WP_435520923.1;Parent=gene-LDO38_RS30470;Dbxref=GenBank:WP_435520923.1;Name=WP_435520923.1;end_range=483,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481356.1;locus_tag=LDO38_RS30470;partial=true;product=alpha/beta fold hydrolase;protein_id=WP_435520923.1;transl_table=11 NZ_CAJZAL010000106.1 RefSeq pseudogene 494 730 . + . ID=gene-LDO38_RS30475;Name=LDO38_RS30475;end_range=730,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30475;partial=true;pseudo=true;start_range=.,494 NZ_CAJZAL010000106.1 Protein Homology CDS 494 730 . + 1 ID=cds-LDO38_RS30475;Parent=gene-LDO38_RS30475;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=730,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725157.1;locus_tag=LDO38_RS30475;partial=true;product=alpha/beta fold hydrolase;pseudo=true;start_range=.,494;transl_table=11 ##sequence-region NZ_CAJZAL010000107.1 1 2091 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000107.1 RefSeq region 1 2091 . + . ID=NZ_CAJZAL010000107.1:1..2091;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_195 NZ_CAJZAL010000107.1 RefSeq gene 1 1002 . + . ID=gene-LDO38_RS08175;Name=LDO38_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08175;old_locus_tag=BVI2075_1950001;partial=true;start_range=.,1 NZ_CAJZAL010000107.1 Protein Homology CDS 1 1002 . + 0 ID=cds-WP_224056316.1;Parent=gene-LDO38_RS08175;Dbxref=GenBank:WP_224056316.1;Name=WP_224056316.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413094.1;locus_tag=LDO38_RS08175;partial=true;product=MFS transporter;protein_id=WP_224056316.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000107.1 RefSeq gene 1082 1549 . - . ID=gene-LDO38_RS08180;Name=LDO38_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08180;old_locus_tag=BVI2075_1950002 NZ_CAJZAL010000107.1 Protein Homology CDS 1082 1549 . - 0 ID=cds-WP_011881544.1;Parent=gene-LDO38_RS08180;Dbxref=GenBank:WP_011881544.1;Name=WP_011881544.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881544.1;locus_tag=LDO38_RS08180;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_011881544.1;transl_table=11 NZ_CAJZAL010000107.1 RefSeq gene 1692 2091 . + . ID=gene-LDO38_RS08185;Name=LDO38_RS08185;end_range=2091,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08185;partial=true NZ_CAJZAL010000107.1 Protein Homology CDS 1692 2091 . + 0 ID=cds-WP_354003658.1;Parent=gene-LDO38_RS08185;Dbxref=GenBank:WP_354003658.1;Name=WP_354003658.1;Ontology_term=GO:0055085,GO:0022857;end_range=2091,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493180.1;locus_tag=LDO38_RS08185;partial=true;product=MFS transporter;protein_id=WP_354003658.1;transl_table=11 ##sequence-region NZ_CAJZAL010000108.1 1 694 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000108.1 RefSeq region 1 694 . + . ID=NZ_CAJZAL010000108.1:1..694;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_196 NZ_CAJZAL010000108.1 RefSeq gene 1 202 . + . ID=gene-LDO38_RS30480;Name=LDO38_RS30480;end_range=202,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30480;partial=true;start_range=.,1 NZ_CAJZAL010000108.1 GeneMarkS-2+ CDS 1 202 . + 0 ID=cds-WP_435520925.1;Parent=gene-LDO38_RS30480;Dbxref=GenBank:WP_435520925.1;Name=WP_435520925.1;end_range=202,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30480;partial=true;product=hypothetical protein;protein_id=WP_435520925.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000108.1 RefSeq gene 213 548 . + . ID=gene-LDO38_RS30485;Name=LDO38_RS30485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30485;partial=true;start_range=.,213 NZ_CAJZAL010000108.1 GeneMarkS-2+ CDS 213 548 . + 0 ID=cds-WP_435520926.1;Parent=gene-LDO38_RS30485;Dbxref=GenBank:WP_435520926.1;Name=WP_435520926.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30485;partial=true;product=hypothetical protein;protein_id=WP_435520926.1;start_range=.,213;transl_table=11 NZ_CAJZAL010000108.1 RefSeq pseudogene 503 694 . + . ID=gene-LDO38_RS08190;Name=LDO38_RS08190;end_range=694,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS08190;partial=true;pseudo=true NZ_CAJZAL010000108.1 Protein Homology CDS 503 694 . + 0 ID=cds-LDO38_RS08190;Parent=gene-LDO38_RS08190;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=694,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477962.1;locus_tag=LDO38_RS08190;partial=true;product=purine permease;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000109.1 1 792 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000109.1 RefSeq region 1 792 . + . ID=NZ_CAJZAL010000109.1:1..792;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_197 NZ_CAJZAL010000109.1 RefSeq gene 1 791 . - . ID=gene-LDO38_RS08195;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=LDO38_RS08195;partial=true;start_range=.,1 NZ_CAJZAL010000109.1 Protein Homology CDS 1 791 . - 0 ID=cds-WP_224056317.1;Parent=gene-LDO38_RS08195;Dbxref=GenBank:WP_224056317.1;Name=WP_224056317.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018442488.1;locus_tag=LDO38_RS08195;partial=true;product=serine hydroxymethyltransferase;protein_id=WP_224056317.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAL010000110.1 1 1342 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000110.1 RefSeq region 1 1342 . + . ID=NZ_CAJZAL010000110.1:1..1342;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_198 NZ_CAJZAL010000110.1 RefSeq pseudogene 1 321 . - . ID=gene-LDO38_RS08200;Name=LDO38_RS08200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS08200;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000110.1 Protein Homology CDS 1 321 . - 0 ID=cds-LDO38_RS08200;Parent=gene-LDO38_RS08200;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366490.1;locus_tag=LDO38_RS08200;partial=true;product=SctK family type III secretion system sorting platform protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000110.1 RefSeq gene 318 1173 . - . ID=gene-LDO38_RS08205;Name=sctJ;end_range=1173,.;gbkey=Gene;gene=sctJ;gene_biotype=protein_coding;locus_tag=LDO38_RS08205;old_locus_tag=BVI2075_1980002;partial=true NZ_CAJZAL010000110.1 Protein Homology CDS 318 1173 . - 1 ID=cds-WP_224056318.1;Parent=gene-LDO38_RS08205;Dbxref=GenBank:WP_224056318.1;Name=WP_224056318.1;Ontology_term=GO:0009306,GO:0030254;end_range=1173,.;gbkey=CDS;gene=sctJ;go_process=protein secretion|0009306||IEA,protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216599.1;locus_tag=LDO38_RS08205;partial=true;product=type III secretion system inner membrane ring lipoprotein SctJ;protein_id=WP_224056318.1;transl_table=11 ##sequence-region NZ_CAJZAL010000111.1 1 1401 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000111.1 RefSeq region 1 1401 . + . ID=NZ_CAJZAL010000111.1:1..1401;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_199 NZ_CAJZAL010000111.1 RefSeq gene 51 1288 . + . ID=gene-LDO38_RS08210;Name=LDO38_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08210 NZ_CAJZAL010000111.1 Protein Homology CDS 51 342 . + 0 ID=cds-WP_105819029.1;Parent=gene-LDO38_RS08210;Dbxref=GenBank:WP_105819029.1;Name=WP_105819029.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558218.1;locus_tag=LDO38_RS08210;product=IS3-like element IS1416 family transposase;protein_id=WP_105819029.1;transl_table=11 NZ_CAJZAL010000111.1 Protein Homology CDS 342 1288 . + 2 ID=cds-WP_105819029.1;Parent=gene-LDO38_RS08210;Dbxref=GenBank:WP_105819029.1;Name=WP_105819029.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558218.1;locus_tag=LDO38_RS08210;product=IS3-like element IS1416 family transposase;protein_id=WP_105819029.1;transl_table=11 NZ_CAJZAL010000111.1 cmsearch sequence_feature 332 448 . + . ID=id-LDO38_RS08210;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO38_RS08210 ##sequence-region NZ_CAJZAL010000112.1 1 43602 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000112.1 RefSeq region 1 43602 . + . ID=NZ_CAJZAL010000112.1:1..43602;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_2 NZ_CAJZAL010000112.1 RefSeq gene 268 1014 . + . ID=gene-LDO38_RS08215;Name=LDO38_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08215;old_locus_tag=BVI2075_20001 NZ_CAJZAL010000112.1 Protein Homology CDS 268 1014 . + 0 ID=cds-WP_059462240.1;Parent=gene-LDO38_RS08215;Dbxref=GenBank:WP_059462240.1;Name=WP_059462240.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476236.1;locus_tag=LDO38_RS08215;product=glucose 1-dehydrogenase;protein_id=WP_059462240.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 1062 1259 . - . ID=gene-LDO38_RS08220;Name=LDO38_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08220;old_locus_tag=BVI2075_20002 NZ_CAJZAL010000112.1 GeneMarkS-2+ CDS 1062 1259 . - 0 ID=cds-WP_224056319.1;Parent=gene-LDO38_RS08220;Dbxref=GenBank:WP_224056319.1;Name=WP_224056319.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS08220;product=hypothetical protein;protein_id=WP_224056319.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 1369 2187 . - . ID=gene-LDO38_RS08225;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=LDO38_RS08225;old_locus_tag=BVI2075_20003 NZ_CAJZAL010000112.1 Protein Homology CDS 1369 2187 . - 0 ID=cds-WP_059462238.1;Parent=gene-LDO38_RS08225;Dbxref=GenBank:WP_059462238.1;Name=WP_059462238.1;Ontology_term=GO:0019310,GO:0016861;gbkey=CDS;gene=iolB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481608.1;locus_tag=LDO38_RS08225;product=5-deoxy-glucuronate isomerase;protein_id=WP_059462238.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 2233 3162 . - . ID=gene-LDO38_RS08230;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=LDO38_RS08230;old_locus_tag=BVI2075_20004 NZ_CAJZAL010000112.1 Protein Homology CDS 2233 3162 . - 0 ID=cds-WP_011884445.1;Parent=gene-LDO38_RS08230;Dbxref=GenBank:WP_011884445.1;Name=WP_011884445.1;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328343.1;locus_tag=LDO38_RS08230;product=myo-inosose-2 dehydratase;protein_id=WP_011884445.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 3223 5106 . - . ID=gene-LDO38_RS08235;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=protein_coding;locus_tag=LDO38_RS08235;old_locus_tag=BVI2075_20006 NZ_CAJZAL010000112.1 Protein Homology CDS 3223 5106 . - 0 ID=cds-WP_041493812.1;Parent=gene-LDO38_RS08235;Dbxref=GenBank:WP_041493812.1;Name=WP_041493812.1;Ontology_term=GO:0019310,GO:0016823,GO:0030976;gbkey=CDS;gene=iolD;go_function=hydrolase activity%2C acting on acid carbon-carbon bonds%2C in ketonic substances|0016823||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363683.1;locus_tag=LDO38_RS08235;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=WP_041493812.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 5195 7150 . - . ID=gene-LDO38_RS08240;Name=LDO38_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08240;old_locus_tag=BVI2075_20007 NZ_CAJZAL010000112.1 Protein Homology CDS 5195 7150 . - 0 ID=cds-WP_059567964.1;Parent=gene-LDO38_RS08240;Dbxref=GenBank:WP_059567964.1;Name=WP_059567964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897282.1;locus_tag=LDO38_RS08240;product=bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2-deoxyphosphogluconate aldolase;protein_id=WP_059567964.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 7466 8392 . + . ID=gene-LDO38_RS08245;Name=LDO38_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08245;old_locus_tag=BVI2075_20009 NZ_CAJZAL010000112.1 Protein Homology CDS 7466 8392 . + 0 ID=cds-WP_011884459.1;Parent=gene-LDO38_RS08245;Dbxref=GenBank:WP_011884459.1;Name=WP_011884459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213578.1;locus_tag=LDO38_RS08245;product=sugar ABC transporter substrate-binding protein;protein_id=WP_011884459.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 8461 10035 . + . ID=gene-LDO38_RS08250;Name=LDO38_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08250;old_locus_tag=BVI2075_20008 NZ_CAJZAL010000112.1 Protein Homology CDS 8461 10035 . + 0 ID=cds-WP_059669433.1;Parent=gene-LDO38_RS08250;Dbxref=GenBank:WP_059669433.1;Name=WP_059669433.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363686.1;locus_tag=LDO38_RS08250;product=sugar ABC transporter ATP-binding protein;protein_id=WP_059669433.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 10063 11088 . + . ID=gene-LDO38_RS08255;Name=LDO38_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08255;old_locus_tag=BVI2075_20010 NZ_CAJZAL010000112.1 Protein Homology CDS 10063 11088 . + 0 ID=cds-WP_069246213.1;Parent=gene-LDO38_RS08255;Dbxref=GenBank:WP_069246213.1;Name=WP_069246213.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010098739.1;locus_tag=LDO38_RS08255;product=ABC transporter permease;protein_id=WP_069246213.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 11217 12230 . + . ID=gene-LDO38_RS08260;Name=LDO38_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08260;old_locus_tag=BVI2075_20011 NZ_CAJZAL010000112.1 Protein Homology CDS 11217 12230 . + 0 ID=cds-WP_011884463.1;Parent=gene-LDO38_RS08260;Dbxref=GenBank:WP_011884463.1;Name=WP_011884463.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656629.1;locus_tag=LDO38_RS08260;product=Gfo/Idh/MocA family protein;protein_id=WP_011884463.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 12382 13554 . + . ID=gene-LDO38_RS08265;Name=LDO38_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08265;old_locus_tag=BVI2075_20012 NZ_CAJZAL010000112.1 Protein Homology CDS 12382 13554 . + 0 ID=cds-WP_059462234.1;Parent=gene-LDO38_RS08265;Dbxref=GenBank:WP_059462234.1;Name=WP_059462234.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897275.1;locus_tag=LDO38_RS08265;product=Gfo/Idh/MocA family protein;protein_id=WP_059462234.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 13812 14696 . + . ID=gene-LDO38_RS08270;Name=LDO38_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08270;old_locus_tag=BVI2075_20014 NZ_CAJZAL010000112.1 Protein Homology CDS 13812 14696 . + 0 ID=cds-WP_014722874.1;Parent=gene-LDO38_RS08270;Dbxref=GenBank:WP_014722874.1;Name=WP_014722874.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497758.1;locus_tag=LDO38_RS08270;product=MurR/RpiR family transcriptional regulator;protein_id=WP_014722874.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 14761 16281 . - . ID=gene-LDO38_RS08275;Name=LDO38_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08275;old_locus_tag=BVI2075_20015 NZ_CAJZAL010000112.1 Protein Homology CDS 14761 16281 . - 0 ID=cds-WP_011884470.1;Parent=gene-LDO38_RS08275;Dbxref=GenBank:WP_011884470.1;Name=WP_011884470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764544.1;locus_tag=LDO38_RS08275;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_011884470.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 16389 17324 . + . ID=gene-LDO38_RS08280;Name=LDO38_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08280;old_locus_tag=BVI2075_20016 NZ_CAJZAL010000112.1 Protein Homology CDS 16389 17324 . + 0 ID=cds-WP_045579222.1;Parent=gene-LDO38_RS08280;Dbxref=GenBank:WP_045579222.1;Name=WP_045579222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545214.1;locus_tag=LDO38_RS08280;product=LysR family transcriptional regulator;protein_id=WP_045579222.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 17700 17927 . + . ID=gene-LDO38_RS08285;Name=LDO38_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08285;old_locus_tag=BVI2075_20017 NZ_CAJZAL010000112.1 Protein Homology CDS 17700 17927 . + 0 ID=cds-WP_006753156.1;Parent=gene-LDO38_RS08285;Dbxref=GenBank:WP_006753156.1;Name=WP_006753156.1;Ontology_term=GO:0097163;gbkey=CDS;go_function=sulfur carrier activity|0097163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026473.1;locus_tag=LDO38_RS08285;product=sulfurtransferase TusA family protein;protein_id=WP_006753156.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 18143 18535 . + . ID=gene-LDO38_RS08290;Name=LDO38_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08290;old_locus_tag=BVI2075_20019 NZ_CAJZAL010000112.1 Protein Homology CDS 18143 18535 . + 0 ID=cds-WP_059896469.1;Parent=gene-LDO38_RS08290;Dbxref=GenBank:WP_059896469.1;Name=WP_059896469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545215.1;locus_tag=LDO38_RS08290;product=hypothetical protein;protein_id=WP_059896469.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 18815 19519 . + . ID=gene-LDO38_RS08295;Name=LDO38_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08295;old_locus_tag=BVI2075_20021 NZ_CAJZAL010000112.1 Protein Homology CDS 18815 19519 . + 0 ID=cds-WP_011884479.1;Parent=gene-LDO38_RS08295;Dbxref=GenBank:WP_011884479.1;Name=WP_011884479.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193573.1;locus_tag=LDO38_RS08295;product=response regulator transcription factor;protein_id=WP_011884479.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 19555 20877 . + . ID=gene-LDO38_RS08300;Name=LDO38_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08300;old_locus_tag=BVI2075_20022 NZ_CAJZAL010000112.1 Protein Homology CDS 19555 20877 . + 0 ID=cds-WP_045579220.1;Parent=gene-LDO38_RS08300;Dbxref=GenBank:WP_045579220.1;Name=WP_045579220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332531.1;locus_tag=LDO38_RS08300;product=FecR family protein;protein_id=WP_045579220.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 20888 23275 . + . ID=gene-LDO38_RS08305;Name=LDO38_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08305;old_locus_tag=BVI2075_20023 NZ_CAJZAL010000112.1 Protein Homology CDS 20888 23275 . + 0 ID=cds-WP_034193312.1;Parent=gene-LDO38_RS08305;Dbxref=GenBank:WP_034193312.1;Name=WP_034193312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328350.1;locus_tag=LDO38_RS08305;product=CHASE2 domain-containing protein;protein_id=WP_034193312.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 23313 23930 . + . ID=gene-LDO38_RS08310;Name=LDO38_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08310;old_locus_tag=BVI2075_20024 NZ_CAJZAL010000112.1 Protein Homology CDS 23313 23930 . + 0 ID=cds-WP_059475936.1;Parent=gene-LDO38_RS08310;Dbxref=GenBank:WP_059475936.1;Name=WP_059475936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490440.1;locus_tag=LDO38_RS08310;product=DUF4136 domain-containing protein;protein_id=WP_059475936.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 23980 24864 . - . ID=gene-LDO38_RS08315;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=LDO38_RS08315;old_locus_tag=BVI2075_20025 NZ_CAJZAL010000112.1 Protein Homology CDS 23980 24864 . - 0 ID=cds-WP_011884488.1;Parent=gene-LDO38_RS08315;Dbxref=GenBank:WP_011884488.1;Name=WP_011884488.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402116.1;locus_tag=LDO38_RS08315;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_011884488.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 24950 27817 . - . ID=gene-LDO38_RS08320;Name=LDO38_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08320;old_locus_tag=BVI2075_20026 NZ_CAJZAL010000112.1 Protein Homology CDS 24950 27817 . - 0 ID=cds-WP_034193314.1;Parent=gene-LDO38_RS08320;Dbxref=GenBank:WP_034193314.1;Name=WP_034193314.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026481.1;locus_tag=LDO38_RS08320;product=valine--tRNA ligase;protein_id=WP_034193314.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 28044 30407 . + . ID=gene-LDO38_RS08325;Name=LDO38_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08325;old_locus_tag=BVI2075_20027 NZ_CAJZAL010000112.1 Protein Homology CDS 28044 30407 . + 0 ID=cds-WP_011884498.1;Parent=gene-LDO38_RS08325;Dbxref=GenBank:WP_011884498.1;Name=WP_011884498.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404978.1;locus_tag=LDO38_RS08325;product=UvrD-helicase domain-containing protein;protein_id=WP_011884498.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 30404 31201 . + . ID=gene-LDO38_RS08330;Name=LDO38_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08330;old_locus_tag=BVI2075_20028 NZ_CAJZAL010000112.1 Protein Homology CDS 30404 31201 . + 0 ID=cds-WP_059567968.1;Parent=gene-LDO38_RS08330;Dbxref=GenBank:WP_059567968.1;Name=WP_059567968.1;Ontology_term=GO:0009116,GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490412.1;locus_tag=LDO38_RS08330;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WP_059567968.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 31268 32506 . - . ID=gene-LDO38_RS08335;Name=LDO38_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08335;old_locus_tag=BVI2075_20029 NZ_CAJZAL010000112.1 Protein Homology CDS 31268 32506 . - 0 ID=cds-WP_014722882.1;Parent=gene-LDO38_RS08335;Dbxref=GenBank:WP_014722882.1;Name=WP_014722882.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491594.1;locus_tag=LDO38_RS08335;product=MFS transporter;protein_id=WP_014722882.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 32911 34575 . + . ID=gene-LDO38_RS08340;Name=LDO38_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08340;old_locus_tag=BVI2075_20031 NZ_CAJZAL010000112.1 Protein Homology CDS 32911 34575 . + 0 ID=cds-WP_045579219.1;Parent=gene-LDO38_RS08340;Dbxref=GenBank:WP_045579219.1;Name=WP_045579219.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545224.1;locus_tag=LDO38_RS08340;product=methyl-accepting chemotaxis protein;protein_id=WP_045579219.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 34595 35473 . - . ID=gene-LDO38_RS08345;Name=LDO38_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08345;old_locus_tag=BVI2075_20032 NZ_CAJZAL010000112.1 Protein Homology CDS 34595 35473 . - 0 ID=cds-WP_011884505.1;Parent=gene-LDO38_RS08345;Dbxref=GenBank:WP_011884505.1;Name=WP_011884505.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402108.1;locus_tag=LDO38_RS08345;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_011884505.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 35486 35689 . - . ID=gene-LDO38_RS08350;Name=LDO38_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08350;old_locus_tag=BVI2075_20033 NZ_CAJZAL010000112.1 Protein Homology CDS 35486 35689 . - 0 ID=cds-WP_011884507.1;Parent=gene-LDO38_RS08350;Dbxref=GenBank:WP_011884507.1;Name=WP_011884507.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891634.1;locus_tag=LDO38_RS08350;product=DUF1656 domain-containing protein;protein_id=WP_011884507.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 35686 37887 . - . ID=gene-LDO38_RS08355;Name=LDO38_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08355;old_locus_tag=BVI2075_20034 NZ_CAJZAL010000112.1 Protein Homology CDS 35686 37887 . - 0 ID=cds-WP_011884508.1;Parent=gene-LDO38_RS08355;Dbxref=GenBank:WP_011884508.1;Name=WP_011884508.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363706.1;locus_tag=LDO38_RS08355;product=FUSC family protein;protein_id=WP_011884508.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 37903 39504 . - . ID=gene-LDO38_RS08360;Name=LDO38_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08360;old_locus_tag=BVI2075_20035 NZ_CAJZAL010000112.1 Protein Homology CDS 37903 39504 . - 0 ID=cds-WP_034193318.1;Parent=gene-LDO38_RS08360;Dbxref=GenBank:WP_034193318.1;Name=WP_034193318.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884510.1;locus_tag=LDO38_RS08360;product=efflux transporter outer membrane subunit;protein_id=WP_034193318.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 39662 40603 . + . ID=gene-LDO38_RS08365;Name=LDO38_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08365;old_locus_tag=BVI2075_20036 NZ_CAJZAL010000112.1 Protein Homology CDS 39662 40603 . + 0 ID=cds-WP_034193319.1;Parent=gene-LDO38_RS08365;Dbxref=GenBank:WP_034193319.1;Name=WP_034193319.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115732.1;locus_tag=LDO38_RS08365;product=LysR family transcriptional regulator;protein_id=WP_034193319.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 40729 40887 . + . ID=gene-LDO38_RS08370;Name=LDO38_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08370;old_locus_tag=BVI2075_20037 NZ_CAJZAL010000112.1 Protein Homology CDS 40729 40887 . + 0 ID=cds-WP_014722886.1;Parent=gene-LDO38_RS08370;Dbxref=GenBank:WP_014722886.1;Name=WP_014722886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897256.1;locus_tag=LDO38_RS08370;product=hypothetical protein;protein_id=WP_014722886.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 40958 41785 . - . ID=gene-LDO38_RS08375;Name=LDO38_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08375;old_locus_tag=BVI2075_20038 NZ_CAJZAL010000112.1 Protein Homology CDS 40958 41785 . - 0 ID=cds-WP_045579217.1;Parent=gene-LDO38_RS08375;Dbxref=GenBank:WP_045579217.1;Name=WP_045579217.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213558.1;locus_tag=LDO38_RS08375;product=metallophosphoesterase;protein_id=WP_045579217.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 41811 43232 . - . ID=gene-LDO38_RS08380;Name=LDO38_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08380;old_locus_tag=BVI2075_20039 NZ_CAJZAL010000112.1 Protein Homology CDS 41811 43232 . - 0 ID=cds-WP_034193320.1;Parent=gene-LDO38_RS08380;Dbxref=GenBank:WP_034193320.1;Name=WP_034193320.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545230.1;locus_tag=LDO38_RS08380;product=FAD-binding oxidoreductase;protein_id=WP_034193320.1;transl_table=11 NZ_CAJZAL010000112.1 RefSeq gene 43253 43602 . - . ID=gene-LDO38_RS08385;Name=LDO38_RS08385;end_range=43602,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08385;old_locus_tag=BVI2075_20040;partial=true NZ_CAJZAL010000112.1 Protein Homology CDS 43253 43602 . - 2 ID=cds-WP_224056320.1;Parent=gene-LDO38_RS08385;Dbxref=GenBank:WP_224056320.1;Name=WP_224056320.1;end_range=43602,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328357.1;locus_tag=LDO38_RS08385;partial=true;product=DUF2069 domain-containing protein;protein_id=WP_224056320.1;transl_table=11 ##sequence-region NZ_CAJZAL010000113.1 1 166285 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000113.1 RefSeq region 1 166285 . + . ID=NZ_CAJZAL010000113.1:1..166285;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_20 NZ_CAJZAL010000113.1 RefSeq pseudogene 1 576 . - . ID=gene-LDO38_RS08390;Name=LDO38_RS08390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS08390;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000113.1 Protein Homology CDS 1 576 . - 0 ID=cds-LDO38_RS08390;Parent=gene-LDO38_RS08390;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009970187.1;locus_tag=LDO38_RS08390;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 580 1242 . - . ID=gene-LDO38_RS08395;Name=LDO38_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08395;old_locus_tag=BVI2075_200002 NZ_CAJZAL010000113.1 Protein Homology CDS 580 1242 . - 0 ID=cds-WP_011885900.1;Parent=gene-LDO38_RS08395;Dbxref=GenBank:WP_011885900.1;Name=WP_011885900.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189255.1;locus_tag=LDO38_RS08395;product=response regulator;protein_id=WP_011885900.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 1426 2967 . + . ID=gene-LDO38_RS08400;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=LDO38_RS08400;old_locus_tag=BVI2075_200003 NZ_CAJZAL010000113.1 Protein Homology CDS 1426 2967 . + 0 ID=cds-WP_011885901.1;Parent=gene-LDO38_RS08400;Dbxref=GenBank:WP_011885901.1;Name=WP_011885901.1;Ontology_term=GO:0009252,GO:0004175,GO:0009002;gbkey=CDS;gene=dacB;go_function=endopeptidase activity|0004175||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477951.1;locus_tag=LDO38_RS08400;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine endopeptidase;protein_id=WP_011885901.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 3544 4458 . + . ID=gene-LDO38_RS08405;Name=LDO38_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08405;old_locus_tag=BVI2075_200005 NZ_CAJZAL010000113.1 Protein Homology CDS 3544 4458 . + 0 ID=cds-WP_011885902.1;Parent=gene-LDO38_RS08405;Dbxref=GenBank:WP_011885902.1;Name=WP_011885902.1;Ontology_term=GO:0006629,GO:0008610,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=lipid metabolic process|0006629||IEA,lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398415.1;locus_tag=LDO38_RS08405;product=sterol desaturase family protein;protein_id=WP_011885902.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 4554 5690 . + . ID=gene-LDO38_RS08410;Name=LDO38_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08410;old_locus_tag=BVI2075_200006 NZ_CAJZAL010000113.1 Protein Homology CDS 4554 5690 . + 0 ID=cds-WP_014723565.1;Parent=gene-LDO38_RS08410;Dbxref=GenBank:WP_014723565.1;Name=WP_014723565.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364608.1;locus_tag=LDO38_RS08410;product=SGNH/GDSL hydrolase family protein;protein_id=WP_014723565.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 5790 6827 . - . ID=gene-LDO38_RS08415;Name=LDO38_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08415;old_locus_tag=BVI2075_200007 NZ_CAJZAL010000113.1 Protein Homology CDS 5790 6827 . - 0 ID=cds-WP_011885904.1;Parent=gene-LDO38_RS08415;Dbxref=GenBank:WP_011885904.1;Name=WP_011885904.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885904.1;locus_tag=LDO38_RS08415;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_011885904.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 6839 8035 . - . ID=gene-LDO38_RS08420;Name=LDO38_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08420;old_locus_tag=BVI2075_200008 NZ_CAJZAL010000113.1 Protein Homology CDS 6839 8035 . - 0 ID=cds-WP_011885905.1;Parent=gene-LDO38_RS08420;Dbxref=GenBank:WP_011885905.1;Name=WP_011885905.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398412.1;locus_tag=LDO38_RS08420;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_011885905.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 8120 8641 . - . ID=gene-LDO38_RS08425;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=LDO38_RS08425;old_locus_tag=BVI2075_200009 NZ_CAJZAL010000113.1 Protein Homology CDS 8120 8641 . - 0 ID=cds-WP_011885906.1;Parent=gene-LDO38_RS08425;Dbxref=GenBank:WP_011885906.1;Name=WP_011885906.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749978.1;locus_tag=LDO38_RS08425;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_011885906.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 8658 9548 . - . ID=gene-LDO38_RS08430;Name=LDO38_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08430;old_locus_tag=BVI2075_200010 NZ_CAJZAL010000113.1 Protein Homology CDS 8658 9548 . - 0 ID=cds-WP_014723567.1;Parent=gene-LDO38_RS08430;Dbxref=GenBank:WP_014723567.1;Name=WP_014723567.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723567.1;locus_tag=LDO38_RS08430;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_014723567.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 9778 10842 . - . ID=gene-LDO38_RS08435;Name=fba;gbkey=Gene;gene=fba;gene_biotype=protein_coding;locus_tag=LDO38_RS08435;old_locus_tag=BVI2075_200011 NZ_CAJZAL010000113.1 Protein Homology CDS 9778 10842 . - 0 ID=cds-WP_014723568.1;Parent=gene-LDO38_RS08435;Dbxref=GenBank:WP_014723568.1;Name=WP_014723568.1;Note=catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle%2C glycolysis%2C and/or gluconeogenesis;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;gene=fba;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013589515.1;locus_tag=LDO38_RS08435;product=class II fructose-bisphosphate aldolase;protein_id=WP_014723568.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 11140 12576 . - . ID=gene-LDO38_RS08440;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=LDO38_RS08440;old_locus_tag=BVI2075_200012 NZ_CAJZAL010000113.1 Protein Homology CDS 11140 12576 . - 0 ID=cds-WP_069246311.1;Parent=gene-LDO38_RS08440;Dbxref=GenBank:WP_069246311.1;Name=WP_069246311.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188973.1;locus_tag=LDO38_RS08440;product=pyruvate kinase;protein_id=WP_069246311.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 12575 12703 . + . ID=gene-LDO38_RS30070;Name=LDO38_RS30070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30070 NZ_CAJZAL010000113.1 GeneMarkS-2+ CDS 12575 12703 . + 0 ID=cds-WP_257785811.1;Parent=gene-LDO38_RS30070;Dbxref=GenBank:WP_257785811.1;Name=WP_257785811.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30070;product=hypothetical protein;protein_id=WP_257785811.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 12861 14057 . - . ID=gene-LDO38_RS08445;Name=LDO38_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08445;old_locus_tag=BVI2075_200013 NZ_CAJZAL010000113.1 Protein Homology CDS 12861 14057 . - 0 ID=cds-WP_011885910.1;Parent=gene-LDO38_RS08445;Dbxref=GenBank:WP_011885910.1;Name=WP_011885910.1;Ontology_term=GO:0006094,GO:0006096,GO:0000166,GO:0004618;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,phosphoglycerate kinase activity|0004618||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699247.1;locus_tag=LDO38_RS08445;product=phosphoglycerate kinase;protein_id=WP_011885910.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 14337 14660 . - . ID=gene-LDO38_RS08450;Name=LDO38_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08450;old_locus_tag=BVI2075_200014 NZ_CAJZAL010000113.1 Protein Homology CDS 14337 14660 . - 0 ID=cds-WP_011885911.1;Parent=gene-LDO38_RS08450;Dbxref=GenBank:WP_011885911.1;Name=WP_011885911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010101895.1;locus_tag=LDO38_RS08450;product=AzlD domain-containing protein;protein_id=WP_011885911.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 14657 15412 . - . ID=gene-LDO38_RS08455;Name=LDO38_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08455;old_locus_tag=BVI2075_200015 NZ_CAJZAL010000113.1 Protein Homology CDS 14657 15412 . - 0 ID=cds-WP_011885912.1;Parent=gene-LDO38_RS08455;Dbxref=GenBank:WP_011885912.1;Name=WP_011885912.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364614.1;locus_tag=LDO38_RS08455;product=AzlC family ABC transporter permease;protein_id=WP_011885912.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 15620 16543 . + . ID=gene-LDO38_RS08460;Name=LDO38_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08460;old_locus_tag=BVI2075_200016 NZ_CAJZAL010000113.1 Protein Homology CDS 15620 16543 . + 0 ID=cds-WP_034192665.1;Parent=gene-LDO38_RS08460;Dbxref=GenBank:WP_034192665.1;Name=WP_034192665.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069237.1;locus_tag=LDO38_RS08460;product=branched-chain amino acid transaminase;protein_id=WP_034192665.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 16594 16788 . + . ID=gene-LDO38_RS08465;Name=LDO38_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08465;old_locus_tag=BVI2075_200017 NZ_CAJZAL010000113.1 Protein Homology CDS 16594 16788 . + 0 ID=cds-WP_006749970.1;Parent=gene-LDO38_RS08465;Dbxref=GenBank:WP_006749970.1;Name=WP_006749970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180502.1;locus_tag=LDO38_RS08465;product=zinc-finger domain-containing protein;protein_id=WP_006749970.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 16928 17965 . + . ID=gene-LDO38_RS08470;Name=waaF;gbkey=Gene;gene=waaF;gene_biotype=protein_coding;locus_tag=LDO38_RS08470;old_locus_tag=BVI2075_200019 NZ_CAJZAL010000113.1 Protein Homology CDS 16928 17965 . + 0 ID=cds-WP_011885914.1;Parent=gene-LDO38_RS08470;Dbxref=GenBank:WP_011885914.1;Name=WP_011885914.1;Ontology_term=GO:0009103,GO:0008920,GO:0016757;gbkey=CDS;gene=waaF;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA,glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011401829.1;locus_tag=LDO38_RS08470;product=lipopolysaccharide heptosyltransferase II;protein_id=WP_011885914.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 18081 18527 . + . ID=gene-LDO38_RS08475;Name=LDO38_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08475;old_locus_tag=BVI2075_200021 NZ_CAJZAL010000113.1 Protein Homology CDS 18081 18527 . + 0 ID=cds-WP_006749968.1;Parent=gene-LDO38_RS08475;Dbxref=GenBank:WP_006749968.1;Name=WP_006749968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090801.1;locus_tag=LDO38_RS08475;product=nuclear transport factor 2 family protein;protein_id=WP_006749968.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 18562 19599 . + . ID=gene-LDO38_RS08480;Name=LDO38_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08480;old_locus_tag=BVI2075_200022 NZ_CAJZAL010000113.1 Protein Homology CDS 18562 19599 . + 0 ID=cds-WP_069246312.1;Parent=gene-LDO38_RS08480;Dbxref=GenBank:WP_069246312.1;Name=WP_069246312.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189905.1;locus_tag=LDO38_RS08480;product=hydrolase;protein_id=WP_069246312.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 19592 20230 . + . ID=gene-LDO38_RS08485;Name=LDO38_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08485;old_locus_tag=BVI2075_200023 NZ_CAJZAL010000113.1 Protein Homology CDS 19592 20230 . + 0 ID=cds-WP_224056321.1;Parent=gene-LDO38_RS08485;Dbxref=GenBank:WP_224056321.1;Name=WP_224056321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885916.1;locus_tag=LDO38_RS08485;product=DUF2946 family protein;protein_id=WP_224056321.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 20261 21955 . - . ID=gene-LDO38_RS08490;Name=LDO38_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08490;old_locus_tag=BVI2075_200024 NZ_CAJZAL010000113.1 Protein Homology CDS 20261 21955 . - 0 ID=cds-WP_045578818.1;Parent=gene-LDO38_RS08490;Dbxref=GenBank:WP_045578818.1;Name=WP_045578818.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723571.1;locus_tag=LDO38_RS08490;product=M48 family metalloprotease;protein_id=WP_045578818.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 22280 22768 . + . ID=gene-LDO38_RS08495;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=LDO38_RS08495;old_locus_tag=BVI2075_200025 NZ_CAJZAL010000113.1 Protein Homology CDS 22280 22768 . + 0 ID=cds-WP_034192668.1;Parent=gene-LDO38_RS08495;Dbxref=GenBank:WP_034192668.1;Name=WP_034192668.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885918.1;locus_tag=LDO38_RS08495;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_034192668.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 22886 25573 . + . ID=gene-LDO38_RS08500;Name=LDO38_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08500;old_locus_tag=BVI2075_200026 NZ_CAJZAL010000113.1 Protein Homology CDS 22886 25573 . + 0 ID=cds-WP_045578817.1;Parent=gene-LDO38_RS08500;Dbxref=GenBank:WP_045578817.1;Name=WP_045578817.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749946.1;locus_tag=LDO38_RS08500;product=type VI secretion system Vgr family protein;protein_id=WP_045578817.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 25566 26513 . + . ID=gene-LDO38_RS08505;Name=LDO38_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08505;old_locus_tag=BVI2075_200027 NZ_CAJZAL010000113.1 Protein Homology CDS 25566 26513 . + 0 ID=cds-WP_224056322.1;Parent=gene-LDO38_RS08505;Dbxref=GenBank:WP_224056322.1;Name=WP_224056322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477925.1;locus_tag=LDO38_RS08505;product=hypothetical protein;protein_id=WP_224056322.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 26593 27759 . + . ID=gene-LDO38_RS08510;Name=LDO38_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08510;old_locus_tag=BVI2075_200028 NZ_CAJZAL010000113.1 Protein Homology CDS 26593 27759 . + 0 ID=cds-WP_059461459.1;Parent=gene-LDO38_RS08510;Dbxref=GenBank:WP_059461459.1;Name=WP_059461459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723575.1;locus_tag=LDO38_RS08510;product=WD40/YVTN/BNR-like repeat-containing protein;protein_id=WP_059461459.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 27931 28281 . - . ID=gene-LDO38_RS08515;Name=LDO38_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08515;old_locus_tag=BVI2075_200029 NZ_CAJZAL010000113.1 Protein Homology CDS 27931 28281 . - 0 ID=cds-WP_034192672.1;Parent=gene-LDO38_RS08515;Dbxref=GenBank:WP_034192672.1;Name=WP_034192672.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759663.1;locus_tag=LDO38_RS08515;product=TonB family protein;protein_id=WP_034192672.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 28689 30467 . - . ID=gene-LDO38_RS08520;Name=LDO38_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08520;old_locus_tag=BVI2075_200030 NZ_CAJZAL010000113.1 Protein Homology CDS 28689 30467 . - 0 ID=cds-WP_059461460.1;Parent=gene-LDO38_RS08520;Dbxref=GenBank:WP_059461460.1;Name=WP_059461460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657828.1;locus_tag=LDO38_RS08520;product=PglL family O-oligosaccharyltransferase;protein_id=WP_059461460.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 30621 31217 . - . ID=gene-LDO38_RS08525;Name=LDO38_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08525;old_locus_tag=BVI2075_200031 NZ_CAJZAL010000113.1 Protein Homology CDS 30621 31217 . - 0 ID=cds-WP_011885922.1;Parent=gene-LDO38_RS08525;Dbxref=GenBank:WP_011885922.1;Name=WP_011885922.1;Ontology_term=GO:0007155,GO:0015628,GO:0009289,GO:0015627;gbkey=CDS;go_component=pilus|0009289||IEA,type II protein secretion system complex|0015627||IEA;go_process=cell adhesion|0007155||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885922.1;locus_tag=LDO38_RS08525;product=pilin;protein_id=WP_011885922.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 31316 32020 . - . ID=gene-LDO38_RS08530;Name=LDO38_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08530;old_locus_tag=BVI2075_200032 NZ_CAJZAL010000113.1 Protein Homology CDS 31316 32020 . - 0 ID=cds-WP_059458264.1;Parent=gene-LDO38_RS08530;Dbxref=GenBank:WP_059458264.1;Name=WP_059458264.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497345.1;locus_tag=LDO38_RS08530;product=TerC family protein;protein_id=WP_059458264.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 32180 33061 . - . ID=gene-LDO38_RS08535;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=LDO38_RS08535;old_locus_tag=BVI2075_200034 NZ_CAJZAL010000113.1 Protein Homology CDS 32180 33061 . - 0 ID=cds-WP_011885924.1;Parent=gene-LDO38_RS08535;Dbxref=GenBank:WP_011885924.1;Name=WP_011885924.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006049960.1;locus_tag=LDO38_RS08535;product=succinate--CoA ligase subunit alpha;protein_id=WP_011885924.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 33130 34296 . - . ID=gene-LDO38_RS08540;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=LDO38_RS08540;old_locus_tag=BVI2075_200035 NZ_CAJZAL010000113.1 Protein Homology CDS 33130 34296 . - 0 ID=cds-WP_011885925.1;Parent=gene-LDO38_RS08540;Dbxref=GenBank:WP_011885925.1;Name=WP_011885925.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486694.1;locus_tag=LDO38_RS08540;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_011885925.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 34365 34973 . - . ID=gene-LDO38_RS08545;Name=LDO38_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08545;old_locus_tag=BVI2075_200036 NZ_CAJZAL010000113.1 Protein Homology CDS 34365 34973 . - 0 ID=cds-WP_011885926.1;Parent=gene-LDO38_RS08545;Dbxref=GenBank:WP_011885926.1;Name=WP_011885926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657830.1;locus_tag=LDO38_RS08545;product=DUF2889 domain-containing protein;protein_id=WP_011885926.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 35120 35977 . - . ID=gene-LDO38_RS08550;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=LDO38_RS08550;old_locus_tag=BVI2075_200037 NZ_CAJZAL010000113.1 Protein Homology CDS 35120 35977 . - 0 ID=cds-WP_045578815.1;Parent=gene-LDO38_RS08550;Dbxref=GenBank:WP_045578815.1;Name=WP_045578815.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477914.1;locus_tag=LDO38_RS08550;product=recombination regulator RecX;protein_id=WP_045578815.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 35977 37047 . - . ID=gene-LDO38_RS08555;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=LDO38_RS08555;old_locus_tag=BVI2075_200038 NZ_CAJZAL010000113.1 Protein Homology CDS 35977 37047 . - 0 ID=cds-WP_011885928.1;Parent=gene-LDO38_RS08555;Dbxref=GenBank:WP_011885928.1;Name=WP_011885928.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189458.1;locus_tag=LDO38_RS08555;product=recombinase RecA;protein_id=WP_011885928.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 37236 37967 . + . ID=gene-LDO38_RS08560;Name=LDO38_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08560;old_locus_tag=BVI2075_200040 NZ_CAJZAL010000113.1 Protein Homology CDS 37236 37967 . + 0 ID=cds-WP_011885929.1;Parent=gene-LDO38_RS08560;Dbxref=GenBank:WP_011885929.1;Name=WP_011885929.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334087.1;locus_tag=LDO38_RS08560;product=response regulator transcription factor;protein_id=WP_011885929.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 37985 39532 . + . ID=gene-LDO38_RS08565;Name=LDO38_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08565;old_locus_tag=BVI2075_200039 NZ_CAJZAL010000113.1 Protein Homology CDS 37985 39532 . + 0 ID=cds-WP_014723583.1;Parent=gene-LDO38_RS08565;Dbxref=GenBank:WP_014723583.1;Name=WP_014723583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329170.1;locus_tag=LDO38_RS08565;product=sensor histidine kinase;protein_id=WP_014723583.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 39749 41407 . + . ID=gene-LDO38_RS08570;Name=LDO38_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08570;old_locus_tag=BVI2075_200041 NZ_CAJZAL010000113.1 Protein Homology CDS 39749 41407 . + 0 ID=cds-WP_059458261.1;Parent=gene-LDO38_RS08570;Dbxref=GenBank:WP_059458261.1;Name=WP_059458261.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546128.1;locus_tag=LDO38_RS08570;product=MFS transporter;protein_id=WP_059458261.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 41536 41612 . + . ID=gene-LDO38_RS08575;Name=LDO38_RS08575;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS08575;old_locus_tag=BVI2075_TRNA3 NZ_CAJZAL010000113.1 tRNAscan-SE tRNA 41536 41612 . + . ID=rna-LDO38_RS08575;Parent=gene-LDO38_RS08575;anticodon=(pos:41570..41572);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS08575;product=tRNA-Met NZ_CAJZAL010000113.1 tRNAscan-SE exon 41536 41612 . + . ID=exon-LDO38_RS08575-1;Parent=rna-LDO38_RS08575;anticodon=(pos:41570..41572);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS08575;product=tRNA-Met NZ_CAJZAL010000113.1 RefSeq gene 41758 42804 . + . ID=gene-LDO38_RS08580;Name=LDO38_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08580;old_locus_tag=BVI2075_200042 NZ_CAJZAL010000113.1 Protein Homology CDS 41758 42804 . + 0 ID=cds-WP_224056323.1;Parent=gene-LDO38_RS08580;Dbxref=GenBank:WP_224056323.1;Name=WP_224056323.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006215922.1;locus_tag=LDO38_RS08580;product=tyrosine-type recombinase/integrase;protein_id=WP_224056323.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 42801 43661 . - . ID=gene-LDO38_RS08585;Name=LDO38_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08585;old_locus_tag=BVI2075_200043 NZ_CAJZAL010000113.1 GeneMarkS-2+ CDS 42801 43661 . - 0 ID=cds-WP_147491901.1;Parent=gene-LDO38_RS08585;Dbxref=GenBank:WP_147491901.1;Name=WP_147491901.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS08585;product=hypothetical protein;protein_id=WP_147491901.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 43841 44077 . + . ID=gene-LDO38_RS08590;Name=LDO38_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08590;old_locus_tag=BVI2075_200044 NZ_CAJZAL010000113.1 Protein Homology CDS 43841 44077 . + 0 ID=cds-WP_224056324.1;Parent=gene-LDO38_RS08590;Dbxref=GenBank:WP_224056324.1;Name=WP_224056324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004548065.1;locus_tag=LDO38_RS08590;product=helix-turn-helix domain-containing protein;protein_id=WP_224056324.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 44074 44688 . + . ID=gene-LDO38_RS08595;Name=LDO38_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08595;old_locus_tag=BVI2075_200045 NZ_CAJZAL010000113.1 Protein Homology CDS 44074 44688 . + 0 ID=cds-WP_059860705.1;Parent=gene-LDO38_RS08595;Dbxref=GenBank:WP_059860705.1;Name=WP_059860705.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009951084.1;locus_tag=LDO38_RS08595;product=helix-turn-helix domain-containing protein;protein_id=WP_059860705.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 44962 45303 . + . ID=gene-LDO38_RS08600;Name=LDO38_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08600;old_locus_tag=BVI2075_200046 NZ_CAJZAL010000113.1 Protein Homology CDS 44962 45303 . + 0 ID=cds-WP_063806550.1;Parent=gene-LDO38_RS08600;Dbxref=GenBank:WP_063806550.1;Name=WP_063806550.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036299.6;locus_tag=LDO38_RS08600;product=TraK family protein;protein_id=WP_063806550.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 45617 46003 . + . ID=gene-LDO38_RS08605;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=LDO38_RS08605;old_locus_tag=BVI2075_200047 NZ_CAJZAL010000113.1 Protein Homology CDS 45617 46003 . + 0 ID=cds-WP_224056325.1;Parent=gene-LDO38_RS08605;Dbxref=GenBank:WP_224056325.1;Name=WP_224056325.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011205281.1;locus_tag=LDO38_RS08605;product=conjugal transfer transcriptional regulator TraJ;protein_id=WP_224056325.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 46000 47985 . + . ID=gene-LDO38_RS08610;Name=traI;gbkey=Gene;gene=traI;gene_biotype=protein_coding;locus_tag=LDO38_RS08610;old_locus_tag=BVI2075_200048 NZ_CAJZAL010000113.1 Protein Homology CDS 46000 47985 . + 0 ID=cds-WP_224056326.1;Parent=gene-LDO38_RS08610;Dbxref=GenBank:WP_224056326.1;Name=WP_224056326.1;gbkey=CDS;gene=traI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009938884.1;locus_tag=LDO38_RS08610;product=TraI/MobA(P) family conjugative relaxase;protein_id=WP_224056326.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 48159 48938 . + . ID=gene-LDO38_RS08615;Name=trbJ;gbkey=Gene;gene=trbJ;gene_biotype=protein_coding;locus_tag=LDO38_RS08615;old_locus_tag=BVI2075_200049 NZ_CAJZAL010000113.1 Protein Homology CDS 48159 48938 . + 0 ID=cds-WP_059860713.1;Parent=gene-LDO38_RS08615;Dbxref=GenBank:WP_059860713.1;Name=WP_059860713.1;gbkey=CDS;gene=trbJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009938883.1;locus_tag=LDO38_RS08615;product=P-type conjugative transfer protein TrbJ;protein_id=WP_059860713.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 48949 49140 . + . ID=gene-LDO38_RS08620;Name=LDO38_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08620 NZ_CAJZAL010000113.1 Protein Homology CDS 48949 49140 . + 0 ID=cds-WP_081065272.1;Parent=gene-LDO38_RS08620;Dbxref=GenBank:WP_081065272.1;Name=WP_081065272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492279.1;locus_tag=LDO38_RS08620;product=hypothetical protein;protein_id=WP_081065272.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 49160 50575 . + . ID=gene-LDO38_RS08625;Name=trbL;gbkey=Gene;gene=trbL;gene_biotype=protein_coding;locus_tag=LDO38_RS08625;old_locus_tag=BVI2075_200050 NZ_CAJZAL010000113.1 Protein Homology CDS 49160 50575 . + 0 ID=cds-WP_224056327.1;Parent=gene-LDO38_RS08625;Dbxref=GenBank:WP_224056327.1;Name=WP_224056327.1;Ontology_term=GO:0009291;gbkey=CDS;gene=trbL;go_process=unidirectional conjugation|0009291||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004548039.1;locus_tag=LDO38_RS08625;product=P-type conjugative transfer protein TrbL;protein_id=WP_224056327.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 50642 50872 . + . ID=gene-LDO38_RS08630;Name=LDO38_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08630;old_locus_tag=BVI2075_200052 NZ_CAJZAL010000113.1 Protein Homology CDS 50642 50872 . + 0 ID=cds-WP_059860715.1;Parent=gene-LDO38_RS08630;Dbxref=GenBank:WP_059860715.1;Name=WP_059860715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009951090.1;locus_tag=LDO38_RS08630;product=type I toxin-antitoxin system ptaRNA1 family toxin;protein_id=WP_059860715.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 51676 53256 . + . ID=gene-LDO38_RS08635;Name=LDO38_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08635;old_locus_tag=BVI2075_200055 NZ_CAJZAL010000113.1 GeneMarkS-2+ CDS 51676 53256 . + 0 ID=cds-WP_155629239.1;Parent=gene-LDO38_RS08635;Dbxref=GenBank:WP_155629239.1;Name=WP_155629239.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS08635;product=hypothetical protein;protein_id=WP_155629239.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 53795 53929 . - . ID=gene-LDO38_RS30075;Name=LDO38_RS30075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30075;old_locus_tag=BVI2075_200059 NZ_CAJZAL010000113.1 GeneMarkS-2+ CDS 53795 53929 . - 0 ID=cds-WP_265096789.1;Parent=gene-LDO38_RS30075;Dbxref=GenBank:WP_265096789.1;Name=WP_265096789.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30075;product=hypothetical protein;protein_id=WP_265096789.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 53928 54386 . + . ID=gene-LDO38_RS08640;Name=LDO38_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08640;old_locus_tag=BVI2075_200058 NZ_CAJZAL010000113.1 GeneMarkS-2+ CDS 53928 54386 . + 0 ID=cds-WP_224056328.1;Parent=gene-LDO38_RS08640;Dbxref=GenBank:WP_224056328.1;Name=WP_224056328.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS08640;product=hypothetical protein;protein_id=WP_224056328.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 54590 54964 . - . ID=gene-LDO38_RS08645;Name=LDO38_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08645;old_locus_tag=BVI2075_200061 NZ_CAJZAL010000113.1 Protein Homology CDS 54590 54964 . - 0 ID=cds-WP_045578801.1;Parent=gene-LDO38_RS08645;Dbxref=GenBank:WP_045578801.1;Name=WP_045578801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484358.1;locus_tag=LDO38_RS08645;product=DUF1493 family protein;protein_id=WP_045578801.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 54964 55395 . - . ID=gene-LDO38_RS08650;Name=LDO38_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08650;old_locus_tag=BVI2075_200062 NZ_CAJZAL010000113.1 Protein Homology CDS 54964 55395 . - 0 ID=cds-WP_045578800.1;Parent=gene-LDO38_RS08650;Dbxref=GenBank:WP_045578800.1;Name=WP_045578800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_060246219.1;locus_tag=LDO38_RS08650;product=STM2901 family protein;protein_id=WP_045578800.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 55411 55779 . - . ID=gene-LDO38_RS08655;Name=LDO38_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08655;old_locus_tag=BVI2075_200063 NZ_CAJZAL010000113.1 Protein Homology CDS 55411 55779 . - 0 ID=cds-WP_045578799.1;Parent=gene-LDO38_RS08655;Dbxref=GenBank:WP_045578799.1;Name=WP_045578799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020703594.1;locus_tag=LDO38_RS08655;product=hypothetical protein;protein_id=WP_045578799.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 56194 56772 . + . ID=gene-LDO38_RS08660;Name=LDO38_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08660;old_locus_tag=BVI2075_200066 NZ_CAJZAL010000113.1 Protein Homology CDS 56194 56772 . + 0 ID=cds-WP_045578798.1;Parent=gene-LDO38_RS08660;Dbxref=GenBank:WP_045578798.1;Name=WP_045578798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004548061.1;locus_tag=LDO38_RS08660;product=hypothetical protein;protein_id=WP_045578798.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq pseudogene 56803 56953 . - . ID=gene-LDO38_RS08665;Name=LDO38_RS08665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS08665;partial=true;pseudo=true;start_range=.,56803 NZ_CAJZAL010000113.1 Protein Homology CDS 56803 56953 . - 0 ID=cds-LDO38_RS08665;Parent=gene-LDO38_RS08665;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013435951.1;locus_tag=LDO38_RS08665;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,56803;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 57015 57989 . - . ID=gene-LDO38_RS08670;Name=LDO38_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08670;old_locus_tag=BVI2075_200067 NZ_CAJZAL010000113.1 Protein Homology CDS 57015 57989 . - 0 ID=cds-WP_014723586.1;Parent=gene-LDO38_RS08670;Dbxref=GenBank:WP_014723586.1;Name=WP_014723586.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723586.1;locus_tag=LDO38_RS08670;product=LysR family transcriptional regulator;protein_id=WP_014723586.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 58186 59154 . - . ID=gene-LDO38_RS08675;Name=LDO38_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08675;old_locus_tag=BVI2075_200068 NZ_CAJZAL010000113.1 Protein Homology CDS 58186 59154 . - 0 ID=cds-WP_059461479.1;Parent=gene-LDO38_RS08675;Dbxref=GenBank:WP_059461479.1;Name=WP_059461479.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896144.1;locus_tag=LDO38_RS08675;product=GlxA family transcriptional regulator;protein_id=WP_059461479.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 59272 59955 . + . ID=gene-LDO38_RS08680;Name=LDO38_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08680;old_locus_tag=BVI2075_200069 NZ_CAJZAL010000113.1 Protein Homology CDS 59272 59955 . + 0 ID=cds-WP_011885935.1;Parent=gene-LDO38_RS08680;Dbxref=GenBank:WP_011885935.1;Name=WP_011885935.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406515.1;locus_tag=LDO38_RS08680;product=DJ-1/PfpI family protein;protein_id=WP_011885935.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 60048 60359 . + . ID=gene-LDO38_RS08685;Name=LDO38_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08685;old_locus_tag=BVI2075_200070 NZ_CAJZAL010000113.1 Protein Homology CDS 60048 60359 . + 0 ID=cds-WP_034192682.1;Parent=gene-LDO38_RS08685;Dbxref=GenBank:WP_034192682.1;Name=WP_034192682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546132.1;locus_tag=LDO38_RS08685;product=cupin domain-containing protein;protein_id=WP_034192682.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 60517 60909 . - . ID=gene-LDO38_RS08690;Name=LDO38_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08690;old_locus_tag=BVI2075_200071 NZ_CAJZAL010000113.1 Protein Homology CDS 60517 60909 . - 0 ID=cds-WP_011885937.1;Parent=gene-LDO38_RS08690;Dbxref=GenBank:WP_011885937.1;Name=WP_011885937.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885937.1;locus_tag=LDO38_RS08690;product=MAPEG family protein;protein_id=WP_011885937.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 61214 64306 . + . ID=gene-LDO38_RS08695;Name=LDO38_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08695;old_locus_tag=BVI2075_200072 NZ_CAJZAL010000113.1 Protein Homology CDS 61214 64306 . + 0 ID=cds-WP_131753853.1;Parent=gene-LDO38_RS08695;Dbxref=GenBank:WP_131753853.1;Name=WP_131753853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885938.1;locus_tag=LDO38_RS08695;product=transglycosylase domain-containing protein;protein_id=WP_131753853.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 64352 64699 . - . ID=gene-LDO38_RS08700;Name=LDO38_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08700;old_locus_tag=BVI2075_200073 NZ_CAJZAL010000113.1 Protein Homology CDS 64352 64699 . - 0 ID=cds-WP_014723591.1;Parent=gene-LDO38_RS08700;Dbxref=GenBank:WP_014723591.1;Name=WP_014723591.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885939.1;locus_tag=LDO38_RS08700;product=GFA family protein;protein_id=WP_014723591.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 64942 65646 . - . ID=gene-LDO38_RS08705;Name=LDO38_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08705;old_locus_tag=BVI2075_200074 NZ_CAJZAL010000113.1 Protein Homology CDS 64942 65646 . - 0 ID=cds-WP_011885940.1;Parent=gene-LDO38_RS08705;Dbxref=GenBank:WP_011885940.1;Name=WP_011885940.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757977.1;locus_tag=LDO38_RS08705;product=FadR/GntR family transcriptional regulator;protein_id=WP_011885940.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 65781 66929 . + . ID=gene-LDO38_RS08710;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=LDO38_RS08710;old_locus_tag=BVI2075_200075 NZ_CAJZAL010000113.1 Protein Homology CDS 65781 66929 . + 0 ID=cds-WP_011885941.1;Parent=gene-LDO38_RS08710;Dbxref=GenBank:WP_011885941.1;Name=WP_011885941.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018437736.1;locus_tag=LDO38_RS08710;product=galactonate dehydratase;protein_id=WP_011885941.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 67056 67991 . - . ID=gene-LDO38_RS08715;Name=LDO38_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08715;old_locus_tag=BVI2075_200076 NZ_CAJZAL010000113.1 Protein Homology CDS 67056 67991 . - 0 ID=cds-WP_059461485.1;Parent=gene-LDO38_RS08715;Dbxref=GenBank:WP_059461485.1;Name=WP_059461485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885942.1;locus_tag=LDO38_RS08715;product=copper resistance D family protein;protein_id=WP_059461485.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 68366 69130 . + . ID=gene-LDO38_RS08720;Name=LDO38_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08720;old_locus_tag=BVI2075_200078 NZ_CAJZAL010000113.1 Protein Homology CDS 68366 69130 . + 0 ID=cds-WP_034192684.1;Parent=gene-LDO38_RS08720;Dbxref=GenBank:WP_034192684.1;Name=WP_034192684.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546139.1;locus_tag=LDO38_RS08720;product=c-type cytochrome;protein_id=WP_034192684.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq pseudogene 69150 70442 . + . ID=gene-LDO38_RS08725;Name=LDO38_RS08725;end_range=70442,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS08725;old_locus_tag=BVI2075_200079;partial=true;pseudo=true NZ_CAJZAL010000113.1 Protein Homology CDS 69150 70442 . + 0 ID=cds-LDO38_RS08725;Parent=gene-LDO38_RS08725;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009055,GO:0020037,GO:0046872;end_range=70442,.;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334110.1;locus_tag=LDO38_RS08725;partial=true;product=c-type cytochrome;pseudo=true;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 70517 71977 . + . ID=gene-LDO38_RS08730;Name=LDO38_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08730;old_locus_tag=BVI2075_200080 NZ_CAJZAL010000113.1 Protein Homology CDS 70517 71977 . + 0 ID=cds-WP_011885945.1;Parent=gene-LDO38_RS08730;Dbxref=GenBank:WP_011885945.1;Name=WP_011885945.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398366.1;locus_tag=LDO38_RS08730;product=DEAD/DEAH box helicase;protein_id=WP_011885945.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 71971 72480 . - . ID=gene-LDO38_RS08735;Name=LDO38_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08735;old_locus_tag=BVI2075_200081 NZ_CAJZAL010000113.1 Protein Homology CDS 71971 72480 . - 0 ID=cds-WP_034192685.1;Parent=gene-LDO38_RS08735;Dbxref=GenBank:WP_034192685.1;Name=WP_034192685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484466.1;locus_tag=LDO38_RS08735;product=hypothetical protein;protein_id=WP_034192685.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 72548 73375 . - . ID=gene-LDO38_RS08740;Name=LDO38_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08740;old_locus_tag=BVI2075_200082 NZ_CAJZAL010000113.1 Protein Homology CDS 72548 73375 . - 0 ID=cds-WP_011885947.1;Parent=gene-LDO38_RS08740;Dbxref=GenBank:WP_011885947.1;Name=WP_011885947.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896130.1;locus_tag=LDO38_RS08740;product=ferritin-like domain-containing protein;protein_id=WP_011885947.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 73710 75350 . - . ID=gene-LDO38_RS08745;Name=LDO38_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08745;old_locus_tag=BVI2075_200083 NZ_CAJZAL010000113.1 Protein Homology CDS 73710 75350 . - 0 ID=cds-WP_059475636.1;Parent=gene-LDO38_RS08745;Dbxref=GenBank:WP_059475636.1;Name=WP_059475636.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212762.1;locus_tag=LDO38_RS08745;product=gamma-glutamyltransferase family protein;protein_id=WP_059475636.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 75652 76431 . + . ID=gene-LDO38_RS08750;Name=LDO38_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08750;old_locus_tag=BVI2075_200084 NZ_CAJZAL010000113.1 Protein Homology CDS 75652 76431 . + 0 ID=cds-WP_011885949.1;Parent=gene-LDO38_RS08750;Dbxref=GenBank:WP_011885949.1;Name=WP_011885949.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364650.1;locus_tag=LDO38_RS08750;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_011885949.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 76732 76929 . + . ID=gene-LDO38_RS08755;Name=LDO38_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08755;old_locus_tag=BVI2075_200085 NZ_CAJZAL010000113.1 Protein Homology CDS 76732 76929 . + 0 ID=cds-WP_011885950.1;Parent=gene-LDO38_RS08755;Dbxref=GenBank:WP_011885950.1;Name=WP_011885950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189182.1;locus_tag=LDO38_RS08755;product=hypothetical protein;protein_id=WP_011885950.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 77020 77388 . - . ID=gene-LDO38_RS08760;Name=LDO38_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08760;old_locus_tag=BVI2075_200086 NZ_CAJZAL010000113.1 Protein Homology CDS 77020 77388 . - 0 ID=cds-WP_011885951.1;Parent=gene-LDO38_RS08760;Dbxref=GenBank:WP_011885951.1;Name=WP_011885951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896126.1;locus_tag=LDO38_RS08760;product=hypothetical protein;protein_id=WP_011885951.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 77550 79073 . + . ID=gene-LDO38_RS08765;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=LDO38_RS08765;old_locus_tag=BVI2075_200087 NZ_CAJZAL010000113.1 Protein Homology CDS 77550 79073 . + 0 ID=cds-WP_224056329.1;Parent=gene-LDO38_RS08765;Dbxref=GenBank:WP_224056329.1;Name=WP_224056329.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546146.1;locus_tag=LDO38_RS08765;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_224056329.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 79192 80694 . + . ID=gene-LDO38_RS08770;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=LDO38_RS08770;old_locus_tag=BVI2075_200088 NZ_CAJZAL010000113.1 Protein Homology CDS 79192 80694 . + 0 ID=cds-WP_011885953.1;Parent=gene-LDO38_RS08770;Dbxref=GenBank:WP_011885953.1;Name=WP_011885953.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896124.1;locus_tag=LDO38_RS08770;product=glycerol kinase GlpK;protein_id=WP_011885953.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 80787 81503 . + . ID=gene-LDO38_RS08775;Name=LDO38_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08775;old_locus_tag=BVI2075_200089 NZ_CAJZAL010000113.1 Protein Homology CDS 80787 81503 . + 0 ID=cds-WP_011885954.1;Parent=gene-LDO38_RS08775;Dbxref=GenBank:WP_011885954.1;Name=WP_011885954.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757965.1;locus_tag=LDO38_RS08775;product=MIP/aquaporin family protein;protein_id=WP_011885954.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 82037 82723 . + . ID=gene-LDO38_RS08780;Name=LDO38_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08780;old_locus_tag=BVI2075_200090 NZ_CAJZAL010000113.1 Protein Homology CDS 82037 82723 . + 0 ID=cds-WP_011885955.1;Parent=gene-LDO38_RS08780;Dbxref=GenBank:WP_011885955.1;Name=WP_011885955.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526142.1;locus_tag=LDO38_RS08780;product=HAD family hydrolase;protein_id=WP_011885955.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 82812 83522 . - . ID=gene-LDO38_RS08785;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=LDO38_RS08785;old_locus_tag=BVI2075_200092 NZ_CAJZAL010000113.1 Protein Homology CDS 82812 83522 . - 0 ID=cds-WP_011885956.1;Parent=gene-LDO38_RS08785;Dbxref=GenBank:WP_011885956.1;Name=WP_011885956.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489272.1;locus_tag=LDO38_RS08785;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_011885956.1;transl_table=11 NZ_CAJZAL010000113.1 cmsearch riboswitch 83641 83789 . - . ID=id-NZ_CAJZAL010000113.1:83641..83789;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAL010000113.1 RefSeq gene 83954 84646 . - . ID=gene-LDO38_RS08790;Name=LDO38_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08790;old_locus_tag=BVI2075_200093 NZ_CAJZAL010000113.1 Protein Homology CDS 83954 84646 . - 0 ID=cds-WP_011885957.1;Parent=gene-LDO38_RS08790;Dbxref=GenBank:WP_011885957.1;Name=WP_011885957.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885957.1;locus_tag=LDO38_RS08790;product=helix-turn-helix domain-containing protein;protein_id=WP_011885957.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 85051 86424 . + . ID=gene-LDO38_RS08795;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=LDO38_RS08795;old_locus_tag=BVI2075_200094 NZ_CAJZAL010000113.1 Protein Homology CDS 85051 86424 . + 0 ID=cds-WP_011885958.1;Parent=gene-LDO38_RS08795;Dbxref=GenBank:WP_011885958.1;Name=WP_011885958.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896118.1;locus_tag=LDO38_RS08795;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_011885958.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 86458 87504 . + . ID=gene-LDO38_RS08800;Name=LDO38_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08800;old_locus_tag=BVI2075_200095 NZ_CAJZAL010000113.1 Protein Homology CDS 86458 87504 . + 0 ID=cds-WP_011885959.1;Parent=gene-LDO38_RS08800;Dbxref=GenBank:WP_011885959.1;Name=WP_011885959.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885959.1;locus_tag=LDO38_RS08800;product=PhoH family protein;protein_id=WP_011885959.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 87677 88453 . + . ID=gene-LDO38_RS08805;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=LDO38_RS08805;old_locus_tag=BVI2075_200096 NZ_CAJZAL010000113.1 Protein Homology CDS 87677 88453 . + 0 ID=cds-WP_069264687.1;Parent=gene-LDO38_RS08805;Dbxref=GenBank:WP_069264687.1;Name=WP_069264687.1;gbkey=CDS;gene=ybeY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530902.1;locus_tag=LDO38_RS08805;product=rRNA maturation RNase YbeY;protein_id=WP_069264687.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 88468 89100 . + . ID=gene-LDO38_RS08810;Name=LDO38_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08810;old_locus_tag=BVI2075_200097 NZ_CAJZAL010000113.1 Protein Homology CDS 88468 89100 . + 0 ID=cds-WP_011885961.1;Parent=gene-LDO38_RS08810;Dbxref=GenBank:WP_011885961.1;Name=WP_011885961.1;Ontology_term=GO:0006751,GO:0061928;gbkey=CDS;go_function=glutathione specific gamma-glutamylcyclotransferase activity|0061928||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486595.1;locus_tag=LDO38_RS08810;product=gamma-glutamylcyclotransferase;protein_id=WP_011885961.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 89171 89320 . + . ID=gene-LDO38_RS08815;Name=LDO38_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08815 NZ_CAJZAL010000113.1 Protein Homology CDS 89171 89320 . + 0 ID=cds-WP_164716012.1;Parent=gene-LDO38_RS08815;Dbxref=GenBank:WP_164716012.1;Name=WP_164716012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497373.1;locus_tag=LDO38_RS08815;product=hypothetical protein;protein_id=WP_164716012.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 89639 90526 . + . ID=gene-LDO38_RS08820;Name=LDO38_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08820;old_locus_tag=BVI2075_200098 NZ_CAJZAL010000113.1 Protein Homology CDS 89639 90526 . + 0 ID=cds-WP_011885962.1;Parent=gene-LDO38_RS08820;Dbxref=GenBank:WP_011885962.1;Name=WP_011885962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024598.1;locus_tag=LDO38_RS08820;product=HlyC/CorC family transporter;protein_id=WP_011885962.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 90578 92278 . + . ID=gene-LDO38_RS08825;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=LDO38_RS08825;old_locus_tag=BVI2075_200099 NZ_CAJZAL010000113.1 Protein Homology CDS 90578 92278 . + 0 ID=cds-WP_046423966.1;Parent=gene-LDO38_RS08825;Dbxref=GenBank:WP_046423966.1;Name=WP_046423966.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723601.1;locus_tag=LDO38_RS08825;product=apolipoprotein N-acyltransferase;protein_id=WP_046423966.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 92393 94021 . - . ID=gene-LDO38_RS08830;Name=LDO38_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08830;old_locus_tag=BVI2075_200100 NZ_CAJZAL010000113.1 Protein Homology CDS 92393 94021 . - 0 ID=cds-WP_224056330.1;Parent=gene-LDO38_RS08830;Dbxref=GenBank:WP_224056330.1;Name=WP_224056330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723602.1;locus_tag=LDO38_RS08830;product=tetratricopeptide repeat protein;protein_id=WP_224056330.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 94365 95369 . + . ID=gene-LDO38_RS08835;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=LDO38_RS08835;old_locus_tag=BVI2075_200101 NZ_CAJZAL010000113.1 Protein Homology CDS 94365 95369 . + 0 ID=cds-WP_011885965.1;Parent=gene-LDO38_RS08835;Dbxref=GenBank:WP_011885965.1;Name=WP_011885965.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896110.1;locus_tag=LDO38_RS08835;product=glycine--tRNA ligase subunit alpha;protein_id=WP_011885965.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 95392 97491 . + . ID=gene-LDO38_RS08840;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=LDO38_RS08840;old_locus_tag=BVI2075_200102 NZ_CAJZAL010000113.1 Protein Homology CDS 95392 97491 . + 0 ID=cds-WP_011885966.1;Parent=gene-LDO38_RS08840;Dbxref=GenBank:WP_011885966.1;Name=WP_011885966.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009963525.1;locus_tag=LDO38_RS08840;product=glycine--tRNA ligase subunit beta;protein_id=WP_011885966.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 97501 98064 . + . ID=gene-LDO38_RS08845;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=LDO38_RS08845;old_locus_tag=BVI2075_200103 NZ_CAJZAL010000113.1 Protein Homology CDS 97501 98064 . + 0 ID=cds-WP_011885967.1;Parent=gene-LDO38_RS08845;Dbxref=GenBank:WP_011885967.1;Name=WP_011885967.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010101763.1;locus_tag=LDO38_RS08845;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_011885967.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 98108 98872 . + . ID=gene-LDO38_RS08850;Name=LDO38_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08850;old_locus_tag=BVI2075_200104 NZ_CAJZAL010000113.1 Protein Homology CDS 98108 98872 . + 0 ID=cds-WP_011885968.1;Parent=gene-LDO38_RS08850;Dbxref=GenBank:WP_011885968.1;Name=WP_011885968.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398329.1;locus_tag=LDO38_RS08850;product=lysophospholipid acyltransferase family protein;protein_id=WP_011885968.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 98919 99836 . + . ID=gene-LDO38_RS08855;Name=LDO38_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08855;old_locus_tag=BVI2075_200105 NZ_CAJZAL010000113.1 Protein Homology CDS 98919 99836 . + 0 ID=cds-WP_069246392.1;Parent=gene-LDO38_RS08855;Dbxref=GenBank:WP_069246392.1;Name=WP_069246392.1;Ontology_term=GO:0006508,GO:0008233,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=peptidase activity|0008233||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398328.1;locus_tag=LDO38_RS08855;product=M48 family metallopeptidase;protein_id=WP_069246392.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 99940 100329 . - . ID=gene-LDO38_RS08860;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=LDO38_RS08860;old_locus_tag=BVI2075_200107 NZ_CAJZAL010000113.1 Protein Homology CDS 99940 100329 . - 0 ID=cds-WP_011885970.1;Parent=gene-LDO38_RS08860;Dbxref=GenBank:WP_011885970.1;Name=WP_011885970.1;Ontology_term=GO:0051596,GO:0004462,GO:0046872;gbkey=CDS;gene=gloA;go_function=lactoylglutathione lyase activity|0004462||IEA,metal ion binding|0046872||IEA;go_process=methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090736.1;locus_tag=LDO38_RS08860;product=lactoylglutathione lyase;protein_id=WP_011885970.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 100746 101681 . + . ID=gene-LDO38_RS08865;Name=LDO38_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08865;old_locus_tag=BVI2075_200108 NZ_CAJZAL010000113.1 Protein Homology CDS 100746 101681 . + 0 ID=cds-WP_011885971.1;Parent=gene-LDO38_RS08865;Dbxref=GenBank:WP_011885971.1;Name=WP_011885971.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491616.1;locus_tag=LDO38_RS08865;product=DMT family transporter;protein_id=WP_011885971.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 101988 102818 . - . ID=gene-LDO38_RS08870;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=LDO38_RS08870;old_locus_tag=BVI2075_200109 NZ_CAJZAL010000113.1 Protein Homology CDS 101988 102818 . - 0 ID=cds-WP_034192693.1;Parent=gene-LDO38_RS08870;Dbxref=GenBank:WP_034192693.1;Name=WP_034192693.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896103.1;locus_tag=LDO38_RS08870;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_034192693.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 102867 103853 . - . ID=gene-LDO38_RS08875;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=LDO38_RS08875;old_locus_tag=BVI2075_200110 NZ_CAJZAL010000113.1 Protein Homology CDS 102867 103853 . - 0 ID=cds-WP_011885973.1;Parent=gene-LDO38_RS08875;Dbxref=GenBank:WP_011885973.1;Name=WP_011885973.1;Ontology_term=GO:0042823,GO:0050570,GO:0051287;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885973.1;locus_tag=LDO38_RS08875;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_011885973.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 103865 105223 . - . ID=gene-LDO38_RS08880;Name=LDO38_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08880;old_locus_tag=BVI2075_200111 NZ_CAJZAL010000113.1 Protein Homology CDS 103865 105223 . - 0 ID=cds-WP_011885974.1;Parent=gene-LDO38_RS08880;Dbxref=GenBank:WP_011885974.1;Name=WP_011885974.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757836.1;locus_tag=LDO38_RS08880;product=peptidylprolyl isomerase;protein_id=WP_011885974.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 105275 107635 . - . ID=gene-LDO38_RS08885;Name=LDO38_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08885;old_locus_tag=BVI2075_200112 NZ_CAJZAL010000113.1 Protein Homology CDS 105275 107635 . - 0 ID=cds-WP_014723607.1;Parent=gene-LDO38_RS08885;Dbxref=GenBank:WP_014723607.1;Name=WP_014723607.1;Ontology_term=GO:0015920;gbkey=CDS;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546173.1;locus_tag=LDO38_RS08885;product=LPS-assembly protein LptD;protein_id=WP_014723607.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 107859 108908 . + . ID=gene-LDO38_RS08890;Name=LDO38_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08890;old_locus_tag=BVI2075_200113 NZ_CAJZAL010000113.1 Protein Homology CDS 107859 108908 . + 0 ID=cds-WP_011885976.1;Parent=gene-LDO38_RS08890;Dbxref=GenBank:WP_011885976.1;Name=WP_011885976.1;Ontology_term=GO:0016310,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010114048.1;locus_tag=LDO38_RS08890;product=aminoglycoside phosphotransferase family protein;protein_id=WP_011885976.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 108931 109650 . + . ID=gene-LDO38_RS08895;Name=murU;gbkey=Gene;gene=murU;gene_biotype=protein_coding;locus_tag=LDO38_RS08895;old_locus_tag=BVI2075_200114 NZ_CAJZAL010000113.1 Protein Homology CDS 108931 109650 . + 0 ID=cds-WP_046423983.1;Parent=gene-LDO38_RS08895;Dbxref=GenBank:WP_046423983.1;Name=WP_046423983.1;Ontology_term=GO:0009252,GO:0016779;gbkey=CDS;gene=murU;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723609.1;locus_tag=LDO38_RS08895;product=N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU;protein_id=WP_046423983.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 109900 111771 . - . ID=gene-LDO38_RS08900;Name=LDO38_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08900;old_locus_tag=BVI2075_200115 NZ_CAJZAL010000113.1 Protein Homology CDS 109900 111771 . - 0 ID=cds-WP_069246393.1;Parent=gene-LDO38_RS08900;Dbxref=GenBank:WP_069246393.1;Name=WP_069246393.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896097.1;locus_tag=LDO38_RS08900;product=ABCB family ABC transporter ATP-binding protein/permease;protein_id=WP_069246393.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 111945 112340 . + . ID=gene-LDO38_RS08905;Name=LDO38_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08905;old_locus_tag=BVI2075_200116 NZ_CAJZAL010000113.1 Protein Homology CDS 111945 112340 . + 0 ID=cds-WP_014723611.1;Parent=gene-LDO38_RS08905;Dbxref=GenBank:WP_014723611.1;Name=WP_014723611.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723611.1;locus_tag=LDO38_RS08905;product=acyl-CoA thioesterase;protein_id=WP_014723611.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 112375 112857 . - . ID=gene-LDO38_RS08910;Name=LDO38_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08910;old_locus_tag=BVI2075_200117 NZ_CAJZAL010000113.1 Protein Homology CDS 112375 112857 . - 0 ID=cds-WP_014723612.1;Parent=gene-LDO38_RS08910;Dbxref=GenBank:WP_014723612.1;Name=WP_014723612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885980.1;locus_tag=LDO38_RS08910;product=nitrate reductase associated protein;protein_id=WP_014723612.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 112937 113800 . + . ID=gene-LDO38_RS08915;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=LDO38_RS08915;old_locus_tag=BVI2075_200118 NZ_CAJZAL010000113.1 Protein Homology CDS 112937 113800 . + 0 ID=cds-WP_232356056.1;Parent=gene-LDO38_RS08915;Dbxref=GenBank:WP_232356056.1;Name=WP_232356056.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415971.1;locus_tag=LDO38_RS08915;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_232356056.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 113785 114951 . - . ID=gene-LDO38_RS08920;Name=LDO38_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08920;old_locus_tag=BVI2075_200119 NZ_CAJZAL010000113.1 Protein Homology CDS 113785 114951 . - 0 ID=cds-WP_011885982.1;Parent=gene-LDO38_RS08920;Dbxref=GenBank:WP_011885982.1;Name=WP_011885982.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011205170.1;locus_tag=LDO38_RS08920;product=fatty acid desaturase;protein_id=WP_011885982.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 115004 115336 . - . ID=gene-LDO38_RS08925;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=LDO38_RS08925;old_locus_tag=BVI2075_200120 NZ_CAJZAL010000113.1 Protein Homology CDS 115004 115336 . - 0 ID=cds-WP_011885983.1;Parent=gene-LDO38_RS08925;Dbxref=GenBank:WP_011885983.1;Name=WP_011885983.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoD;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352504.1;locus_tag=LDO38_RS08925;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_011885983.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 115337 115948 . - . ID=gene-LDO38_RS08930;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;locus_tag=LDO38_RS08930;old_locus_tag=BVI2075_200121 NZ_CAJZAL010000113.1 Protein Homology CDS 115337 115948 . - 0 ID=cds-WP_011885984.1;Parent=gene-LDO38_RS08930;Dbxref=GenBank:WP_011885984.1;Name=WP_011885984.1;Ontology_term=GO:0019646,GO:0009486;gbkey=CDS;gene=cyoC;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009935051.1;locus_tag=LDO38_RS08930;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_011885984.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 115948 117960 . - . ID=gene-LDO38_RS08935;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=LDO38_RS08935;old_locus_tag=BVI2075_200122 NZ_CAJZAL010000113.1 Protein Homology CDS 115948 117960 . - 0 ID=cds-WP_011885985.1;Parent=gene-LDO38_RS08935;Dbxref=GenBank:WP_011885985.1;Name=WP_011885985.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoB;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331750.1;locus_tag=LDO38_RS08935;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_011885985.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 117964 118854 . - . ID=gene-LDO38_RS08940;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=LDO38_RS08940;old_locus_tag=BVI2075_200123 NZ_CAJZAL010000113.1 Protein Homology CDS 117964 118854 . - 0 ID=cds-WP_014723614.1;Parent=gene-LDO38_RS08940;Dbxref=GenBank:WP_014723614.1;Name=WP_014723614.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoA;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885986.1;locus_tag=LDO38_RS08940;product=ubiquinol oxidase subunit II;protein_id=WP_014723614.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 119359 120126 . - . ID=gene-LDO38_RS08945;Name=LDO38_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08945;old_locus_tag=BVI2075_200124 NZ_CAJZAL010000113.1 Protein Homology CDS 119359 120126 . - 0 ID=cds-WP_014723615.1;Parent=gene-LDO38_RS08945;Dbxref=GenBank:WP_014723615.1;Name=WP_014723615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406562.1;locus_tag=LDO38_RS08945;product=enoyl-CoA hydratase;protein_id=WP_014723615.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 120218 121417 . - . ID=gene-LDO38_RS08950;Name=LDO38_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08950;old_locus_tag=BVI2075_200125 NZ_CAJZAL010000113.1 Protein Homology CDS 120218 121417 . - 0 ID=cds-WP_011885988.1;Parent=gene-LDO38_RS08950;Dbxref=GenBank:WP_011885988.1;Name=WP_011885988.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353151.1;locus_tag=LDO38_RS08950;product=acetyl-CoA C-acyltransferase;protein_id=WP_011885988.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 121444 123879 . - . ID=gene-LDO38_RS08955;Name=LDO38_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08955;old_locus_tag=BVI2075_200126 NZ_CAJZAL010000113.1 Protein Homology CDS 121444 123879 . - 0 ID=cds-WP_224056331.1;Parent=gene-LDO38_RS08955;Dbxref=GenBank:WP_224056331.1;Name=WP_224056331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004537876.1;locus_tag=LDO38_RS08955;product=3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein;protein_id=WP_224056331.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 123993 125780 . - . ID=gene-LDO38_RS08960;Name=LDO38_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08960;old_locus_tag=BVI2075_200127 NZ_CAJZAL010000113.1 Protein Homology CDS 123993 125780 . - 0 ID=cds-WP_034192699.1;Parent=gene-LDO38_RS08960;Dbxref=GenBank:WP_034192699.1;Name=WP_034192699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017772699.1;locus_tag=LDO38_RS08960;product=acyl-CoA dehydrogenase C-terminal domain-containing protein;protein_id=WP_034192699.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 125838 126437 . - . ID=gene-LDO38_RS08965;Name=LDO38_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08965;old_locus_tag=BVI2075_200128 NZ_CAJZAL010000113.1 Protein Homology CDS 125838 126437 . - 0 ID=cds-WP_069246320.1;Parent=gene-LDO38_RS08965;Dbxref=GenBank:WP_069246320.1;Name=WP_069246320.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006047961.1;locus_tag=LDO38_RS08965;product=TetR/AcrR family transcriptional regulator;protein_id=WP_069246320.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 126627 127901 . - . ID=gene-LDO38_RS08970;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=LDO38_RS08970;old_locus_tag=BVI2075_200129 NZ_CAJZAL010000113.1 Protein Homology CDS 126627 127901 . - 0 ID=cds-WP_059622618.1;Parent=gene-LDO38_RS08970;Dbxref=GenBank:WP_059622618.1;Name=WP_059622618.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189031.1;locus_tag=LDO38_RS08970;product=cardiolipin synthase ClsB;protein_id=WP_059622618.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 127898 128392 . - . ID=gene-LDO38_RS08975;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=LDO38_RS08975;old_locus_tag=BVI2075_200130 NZ_CAJZAL010000113.1 Protein Homology CDS 127898 128392 . - 0 ID=cds-WP_011885993.1;Parent=gene-LDO38_RS08975;Dbxref=GenBank:WP_011885993.1;Name=WP_011885993.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364686.1;locus_tag=LDO38_RS08975;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_011885993.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 128550 130352 . - . ID=gene-LDO38_RS08980;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=LDO38_RS08980;old_locus_tag=BVI2075_200131 NZ_CAJZAL010000113.1 Protein Homology CDS 128550 130352 . - 0 ID=cds-WP_014723620.1;Parent=gene-LDO38_RS08980;Dbxref=GenBank:WP_014723620.1;Name=WP_014723620.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024571.1;locus_tag=LDO38_RS08980;product=aspartate--tRNA ligase;protein_id=WP_014723620.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 130420 131070 . - . ID=gene-LDO38_RS08985;Name=LDO38_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08985;old_locus_tag=BVI2075_200132 NZ_CAJZAL010000113.1 Protein Homology CDS 130420 131070 . - 0 ID=cds-WP_011885995.1;Parent=gene-LDO38_RS08985;Dbxref=GenBank:WP_011885995.1;Name=WP_011885995.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024570.1;locus_tag=LDO38_RS08985;product=DUF502 domain-containing protein;protein_id=WP_011885995.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 131132 131473 . - . ID=gene-LDO38_RS08990;Name=LDO38_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08990;old_locus_tag=BVI2075_200133 NZ_CAJZAL010000113.1 Protein Homology CDS 131132 131473 . - 0 ID=cds-WP_014723622.1;Parent=gene-LDO38_RS08990;Dbxref=GenBank:WP_014723622.1;Name=WP_014723622.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004555565.1;locus_tag=LDO38_RS08990;product=FmdB family zinc ribbon protein;protein_id=WP_014723622.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 131569 132195 . - . ID=gene-LDO38_RS08995;Name=LDO38_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS08995;old_locus_tag=BVI2075_200134 NZ_CAJZAL010000113.1 Protein Homology CDS 131569 132195 . - 0 ID=cds-WP_011885997.1;Parent=gene-LDO38_RS08995;Dbxref=GenBank:WP_011885997.1;Name=WP_011885997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751503.1;locus_tag=LDO38_RS08995;product=SAM-dependent methyltransferase;protein_id=WP_011885997.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 132213 133790 . - . ID=gene-LDO38_RS09000;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=LDO38_RS09000;old_locus_tag=BVI2075_200135 NZ_CAJZAL010000113.1 Protein Homology CDS 132213 133790 . - 0 ID=cds-WP_011885998.1;Parent=gene-LDO38_RS09000;Dbxref=GenBank:WP_011885998.1;Name=WP_011885998.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477840.1;locus_tag=LDO38_RS09000;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_011885998.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 133803 134429 . - . ID=gene-LDO38_RS09005;Name=LDO38_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09005;old_locus_tag=BVI2075_200136 NZ_CAJZAL010000113.1 Protein Homology CDS 133803 134429 . - 0 ID=cds-WP_011885999.1;Parent=gene-LDO38_RS09005;Dbxref=GenBank:WP_011885999.1;Name=WP_011885999.1;Ontology_term=GO:0006744,GO:0008289,GO:0110142;gbkey=CDS;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_function=lipid binding|0008289||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761590.1;locus_tag=LDO38_RS09005;product=ubiquinone biosynthesis accessory factor UbiJ;protein_id=WP_011885999.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 134575 135606 . - . ID=gene-LDO38_RS09010;Name=LDO38_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09010;old_locus_tag=BVI2075_200137 NZ_CAJZAL010000113.1 Protein Homology CDS 134575 135606 . - 0 ID=cds-WP_069246321.1;Parent=gene-LDO38_RS09010;Dbxref=GenBank:WP_069246321.1;Name=WP_069246321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546188.1;locus_tag=LDO38_RS09010;product=Tim44 domain-containing protein;protein_id=WP_069246321.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 135648 136379 . - . ID=gene-LDO38_RS09015;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=LDO38_RS09015;old_locus_tag=BVI2075_200138 NZ_CAJZAL010000113.1 Protein Homology CDS 135648 136379 . - 0 ID=cds-WP_011886001.1;Parent=gene-LDO38_RS09015;Dbxref=GenBank:WP_011886001.1;Name=WP_011886001.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546189.1;locus_tag=LDO38_RS09015;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_011886001.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 136432 136845 . - . ID=gene-LDO38_RS09020;Name=LDO38_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09020;old_locus_tag=BVI2075_200139 NZ_CAJZAL010000113.1 Protein Homology CDS 136432 136845 . - 0 ID=cds-WP_011886002.1;Parent=gene-LDO38_RS09020;Dbxref=GenBank:WP_011886002.1;Name=WP_011886002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487879.1;locus_tag=LDO38_RS09020;product=gamma-butyrobetaine hydroxylase-like domain-containing protein;protein_id=WP_011886002.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 136842 137285 . - . ID=gene-LDO38_RS09025;Name=LDO38_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09025;old_locus_tag=BVI2075_200140 NZ_CAJZAL010000113.1 Protein Homology CDS 136842 137285 . - 0 ID=cds-WP_011886003.1;Parent=gene-LDO38_RS09025;Dbxref=GenBank:WP_011886003.1;Name=WP_011886003.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004550872.1;locus_tag=LDO38_RS09025;product=HIT family protein;protein_id=WP_011886003.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 137351 141370 . - . ID=gene-LDO38_RS09030;Name=LDO38_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09030;old_locus_tag=BVI2075_200141 NZ_CAJZAL010000113.1 Protein Homology CDS 137351 141370 . - 0 ID=cds-WP_011886004.1;Parent=gene-LDO38_RS09030;Dbxref=GenBank:WP_011886004.1;Name=WP_011886004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543744.1;locus_tag=LDO38_RS09030;product=DUF3683 domain-containing protein;protein_id=WP_011886004.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 141992 143515 . + . ID=gene-LDO38_RS09035;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=LDO38_RS09035;old_locus_tag=BVI2075_200143 NZ_CAJZAL010000113.1 Protein Homology CDS 141992 143515 . + 0 ID=cds-WP_014723627.1;Parent=gene-LDO38_RS09035;Dbxref=GenBank:WP_014723627.1;Name=WP_014723627.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334189.1;locus_tag=LDO38_RS09035;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_014723627.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 143528 144352 . + . ID=gene-LDO38_RS09040;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=LDO38_RS09040;old_locus_tag=BVI2075_200144 NZ_CAJZAL010000113.1 Protein Homology CDS 143528 144352 . + 0 ID=cds-WP_014723628.1;Parent=gene-LDO38_RS09040;Dbxref=GenBank:WP_014723628.1;Name=WP_014723628.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886006.1;locus_tag=LDO38_RS09040;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_014723628.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 144447 144833 . - . ID=gene-LDO38_RS09045;Name=LDO38_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09045;old_locus_tag=BVI2075_200145 NZ_CAJZAL010000113.1 Protein Homology CDS 144447 144833 . - 0 ID=cds-WP_011886007.1;Parent=gene-LDO38_RS09045;Dbxref=GenBank:WP_011886007.1;Name=WP_011886007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751946.1;locus_tag=LDO38_RS09045;product=RidA family protein;protein_id=WP_011886007.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 144929 146410 . - . ID=gene-LDO38_RS09050;Name=LDO38_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09050;old_locus_tag=BVI2075_200146 NZ_CAJZAL010000113.1 Protein Homology CDS 144929 146410 . - 0 ID=cds-WP_069246322.1;Parent=gene-LDO38_RS09050;Dbxref=GenBank:WP_069246322.1;Name=WP_069246322.1;Ontology_term=GO:0047420;gbkey=CDS;go_function=N-acyl-D-amino-acid deacylase activity|0047420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353172.1;locus_tag=LDO38_RS09050;product=N-acyl-D-amino-acid deacylase family protein;protein_id=WP_069246322.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 146413 147351 . - . ID=gene-LDO38_RS09055;Name=LDO38_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09055;old_locus_tag=BVI2075_200147 NZ_CAJZAL010000113.1 Protein Homology CDS 146413 147351 . - 0 ID=cds-WP_011886009.1;Parent=gene-LDO38_RS09055;Dbxref=GenBank:WP_011886009.1;Name=WP_011886009.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723631.1;locus_tag=LDO38_RS09055;product=MurR/RpiR family transcriptional regulator;protein_id=WP_011886009.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 147471 148751 . + . ID=gene-LDO38_RS09060;Name=LDO38_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09060;old_locus_tag=BVI2075_200148 NZ_CAJZAL010000113.1 Protein Homology CDS 147471 148751 . + 0 ID=cds-WP_224056332.1;Parent=gene-LDO38_RS09060;Dbxref=GenBank:WP_224056332.1;Name=WP_224056332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009902905.1;locus_tag=LDO38_RS09060;product=amino acid deaminase;protein_id=WP_224056332.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 148916 149497 . + . ID=gene-LDO38_RS09065;Name=LDO38_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09065;old_locus_tag=BVI2075_200149 NZ_CAJZAL010000113.1 Protein Homology CDS 148916 149497 . + 0 ID=cds-WP_011886011.1;Parent=gene-LDO38_RS09065;Dbxref=GenBank:WP_011886011.1;Name=WP_011886011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024552.1;locus_tag=LDO38_RS09065;product=DJ-1/PfpI family protein;protein_id=WP_011886011.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 149609 150055 . - . ID=gene-LDO38_RS09070;Name=LDO38_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09070;old_locus_tag=BVI2075_200150 NZ_CAJZAL010000113.1 Protein Homology CDS 149609 150055 . - 0 ID=cds-WP_014723633.1;Parent=gene-LDO38_RS09070;Dbxref=GenBank:WP_014723633.1;Name=WP_014723633.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759689.1;locus_tag=LDO38_RS09070;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_014723633.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 150091 151686 . - . ID=gene-LDO38_RS09075;Name=LDO38_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09075;old_locus_tag=BVI2075_200151 NZ_CAJZAL010000113.1 Protein Homology CDS 150091 151686 . - 0 ID=cds-WP_059462452.1;Parent=gene-LDO38_RS09075;Dbxref=GenBank:WP_059462452.1;Name=WP_059462452.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406581.1;locus_tag=LDO38_RS09075;product=MFS transporter;protein_id=WP_059462452.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 151791 152633 . + . ID=gene-LDO38_RS09080;Name=LDO38_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09080;old_locus_tag=BVI2075_200152 NZ_CAJZAL010000113.1 Protein Homology CDS 151791 152633 . + 0 ID=cds-WP_011886014.1;Parent=gene-LDO38_RS09080;Dbxref=GenBank:WP_011886014.1;Name=WP_011886014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004555278.1;locus_tag=LDO38_RS09080;product=EcsC family protein;protein_id=WP_011886014.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 152918 153352 . - . ID=gene-LDO38_RS09085;Name=LDO38_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09085;old_locus_tag=BVI2075_200153 NZ_CAJZAL010000113.1 Protein Homology CDS 152918 153352 . - 0 ID=cds-WP_011886015.1;Parent=gene-LDO38_RS09085;Dbxref=GenBank:WP_011886015.1;Name=WP_011886015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657914.1;locus_tag=LDO38_RS09085;product=CHRD domain-containing protein;protein_id=WP_011886015.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 153684 154457 . - . ID=gene-LDO38_RS09090;Name=LDO38_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09090;old_locus_tag=BVI2075_200154 NZ_CAJZAL010000113.1 Protein Homology CDS 153684 154457 . - 0 ID=cds-WP_045578782.1;Parent=gene-LDO38_RS09090;Dbxref=GenBank:WP_045578782.1;Name=WP_045578782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353182.1;locus_tag=LDO38_RS09090;product=class II aldolase/adducin family protein;protein_id=WP_045578782.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 154609 156231 . - . ID=gene-LDO38_RS09095;Name=LDO38_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09095;old_locus_tag=BVI2075_200155 NZ_CAJZAL010000113.1 Protein Homology CDS 154609 156231 . - 0 ID=cds-WP_034194792.1;Parent=gene-LDO38_RS09095;Dbxref=GenBank:WP_034194792.1;Name=WP_034194792.1;Ontology_term=GO:0032049,GO:0090483;gbkey=CDS;go_function=phosphatidylglycerol-phosphatidylethanolamine phosphatidyltransferase activity|0090483||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497399.1;locus_tag=LDO38_RS09095;product=phospholipase D family protein;protein_id=WP_034194792.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 156546 157262 . - . ID=gene-LDO38_RS09100;Name=LDO38_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09100;old_locus_tag=BVI2075_200157 NZ_CAJZAL010000113.1 Protein Homology CDS 156546 157262 . - 0 ID=cds-WP_011886018.1;Parent=gene-LDO38_RS09100;Dbxref=GenBank:WP_011886018.1;Name=WP_011886018.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886018.1;locus_tag=LDO38_RS09100;product=FadR/GntR family transcriptional regulator;protein_id=WP_011886018.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 157396 158196 . + . ID=gene-LDO38_RS09105;Name=LDO38_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09105;old_locus_tag=BVI2075_200158 NZ_CAJZAL010000113.1 Protein Homology CDS 157396 158196 . + 0 ID=cds-WP_041493889.1;Parent=gene-LDO38_RS09105;Dbxref=GenBank:WP_041493889.1;Name=WP_041493889.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762757.1;locus_tag=LDO38_RS09105;product=(Fe-S)-binding protein;protein_id=WP_041493889.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 158193 158918 . + . ID=gene-LDO38_RS09110;Name=LDO38_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09110;old_locus_tag=BVI2075_200159 NZ_CAJZAL010000113.1 Protein Homology CDS 158193 158918 . + 0 ID=cds-WP_224056333.1;Parent=gene-LDO38_RS09110;Dbxref=GenBank:WP_224056333.1;Name=WP_224056333.1;Ontology_term=GO:0006089;gbkey=CDS;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364706.1;locus_tag=LDO38_RS09110;product=LutC/YkgG family protein;protein_id=WP_224056333.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 158915 160360 . + . ID=gene-LDO38_RS09115;Name=LDO38_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09115;old_locus_tag=BVI2075_200160 NZ_CAJZAL010000113.1 Protein Homology CDS 158915 160360 . + 0 ID=cds-WP_034194789.1;Parent=gene-LDO38_RS09115;Dbxref=GenBank:WP_034194789.1;Name=WP_034194789.1;Ontology_term=GO:0006089,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886021.1;locus_tag=LDO38_RS09115;product=LutB/LldF family L-lactate oxidation iron-sulfur protein;protein_id=WP_034194789.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 160409 162109 . + . ID=gene-LDO38_RS09120;Name=LDO38_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09120;old_locus_tag=BVI2075_200161 NZ_CAJZAL010000113.1 Protein Homology CDS 160409 162109 . + 0 ID=cds-WP_034194788.1;Parent=gene-LDO38_RS09120;Dbxref=GenBank:WP_034194788.1;Name=WP_034194788.1;Ontology_term=GO:0015718,GO:0008028,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=monocarboxylic acid transmembrane transporter activity|0008028||IEA;go_process=monocarboxylic acid transport|0015718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761804.1;locus_tag=LDO38_RS09120;product=lactate permease LctP family transporter;protein_id=WP_034194788.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 162221 162982 . - . ID=gene-LDO38_RS09125;Name=LDO38_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09125;old_locus_tag=BVI2075_200162 NZ_CAJZAL010000113.1 Protein Homology CDS 162221 162982 . - 0 ID=cds-WP_011886023.1;Parent=gene-LDO38_RS09125;Dbxref=GenBank:WP_011886023.1;Name=WP_011886023.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477817.1;locus_tag=LDO38_RS09125;product=M48 family metalloprotease;protein_id=WP_011886023.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 163120 163935 . - . ID=gene-LDO38_RS09130;Name=LDO38_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09130;old_locus_tag=BVI2075_200163 NZ_CAJZAL010000113.1 Protein Homology CDS 163120 163935 . - 0 ID=cds-WP_034194787.1;Parent=gene-LDO38_RS09130;Dbxref=GenBank:WP_034194787.1;Name=WP_034194787.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886024.1;locus_tag=LDO38_RS09130;product=glycosyltransferase family 2 protein;protein_id=WP_034194787.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 164052 164288 . - . ID=gene-LDO38_RS09135;Name=LDO38_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09135 NZ_CAJZAL010000113.1 GeneMarkS-2+ CDS 164052 164288 . - 0 ID=cds-WP_059475006.1;Parent=gene-LDO38_RS09135;Dbxref=GenBank:WP_059475006.1;Name=WP_059475006.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS09135;product=hypothetical protein;protein_id=WP_059475006.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 164447 165163 . - . ID=gene-LDO38_RS09140;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=LDO38_RS09140;old_locus_tag=BVI2075_200165 NZ_CAJZAL010000113.1 Protein Homology CDS 164447 165163 . - 0 ID=cds-WP_046424016.1;Parent=gene-LDO38_RS09140;Dbxref=GenBank:WP_046424016.1;Name=WP_046424016.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fabG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003269686.1;locus_tag=LDO38_RS09140;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_046424016.1;transl_table=11 NZ_CAJZAL010000113.1 RefSeq gene 165272 165532 . - . ID=gene-LDO38_RS09145;Name=LDO38_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09145;old_locus_tag=BVI2075_200166 NZ_CAJZAL010000113.1 Protein Homology CDS 165272 165532 . - 0 ID=cds-WP_011886027.1;Parent=gene-LDO38_RS09145;Dbxref=GenBank:WP_011886027.1;Name=WP_011886027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014252231.1;locus_tag=LDO38_RS09145;product=phosphopantetheine-binding protein;protein_id=WP_011886027.1;transl_table=11 ##sequence-region NZ_CAJZAL010000114.1 1 1804 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000114.1 RefSeq region 1 1804 . + . ID=NZ_CAJZAL010000114.1:1..1804;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_200 NZ_CAJZAL010000114.1 RefSeq gene 1 615 . - . ID=gene-LDO38_RS09150;Name=LDO38_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09150;partial=true;start_range=.,1 NZ_CAJZAL010000114.1 Protein Homology CDS 1 615 . - 0 ID=cds-WP_224056334.1;Parent=gene-LDO38_RS09150;Dbxref=GenBank:WP_224056334.1;Name=WP_224056334.1;Ontology_term=GO:0005515,GO:0070064;gbkey=CDS;go_function=protein binding|0005515||IEA,proline-rich region binding|0070064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725072.1;locus_tag=LDO38_RS09150;partial=true;product=SH3 domain-containing protein;protein_id=WP_224056334.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000114.1 RefSeq gene 649 1107 . - . ID=gene-LDO38_RS09155;Name=LDO38_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09155;old_locus_tag=BVI2075_2000002 NZ_CAJZAL010000114.1 Protein Homology CDS 649 1107 . - 0 ID=cds-WP_069240112.1;Parent=gene-LDO38_RS09155;Dbxref=GenBank:WP_069240112.1;Name=WP_069240112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547931.1;locus_tag=LDO38_RS09155;product=hypothetical protein;protein_id=WP_069240112.1;transl_table=11 NZ_CAJZAL010000114.1 RefSeq pseudogene 1305 1557 . + . ID=gene-LDO38_RS30490;Name=LDO38_RS30490;end_range=1557,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30490;old_locus_tag=BVI2075_2000005;partial=true;pseudo=true NZ_CAJZAL010000114.1 Protein Homology CDS 1305 1557 . + 0 ID=cds-LDO38_RS30490;Parent=gene-LDO38_RS30490;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1557,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765744.1;locus_tag=LDO38_RS30490;partial=true;product=sigma-70 family RNA polymerase sigma factor;pseudo=true;transl_table=11 NZ_CAJZAL010000114.1 RefSeq gene 1568 1804 . + . ID=gene-LDO38_RS30495;Name=LDO38_RS30495;end_range=1804,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30495;partial=true;start_range=.,1568 NZ_CAJZAL010000114.1 Protein Homology CDS 1568 1804 . + 1 ID=cds-WP_435520929.1;Parent=gene-LDO38_RS30495;Dbxref=GenBank:WP_435520929.1;Name=WP_435520929.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;end_range=1804,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881983.1;locus_tag=LDO38_RS30495;partial=true;product=sigma-70 factor domain-containing protein;protein_id=WP_435520929.1;start_range=.,1568;transl_table=11 ##sequence-region NZ_CAJZAL010000115.1 1 755 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000115.1 RefSeq region 1 755 . + . ID=NZ_CAJZAL010000115.1:1..755;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_201 NZ_CAJZAL010000115.1 RefSeq gene 1 755 . - . ID=gene-LDO38_RS09165;Name=LDO38_RS09165;end_range=755,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09165;partial=true;start_range=.,1 NZ_CAJZAL010000115.1 Protein Homology CDS 1 755 . - 2 ID=cds-WP_224056335.1;Parent=gene-LDO38_RS09165;Dbxref=GenBank:WP_224056335.1;Name=WP_224056335.1;Ontology_term=GO:0009436,GO:0071704,GO:0016829;end_range=755,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=glyoxylate catabolic process|0009436||IEA,obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481055.1;locus_tag=LDO38_RS09165;partial=true;product=dihydrodipicolinate synthase family protein;protein_id=WP_224056335.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAL010000116.1 1 1533 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000116.1 RefSeq region 1 1533 . + . ID=NZ_CAJZAL010000116.1:1..1533;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_202 NZ_CAJZAL010000116.1 RefSeq gene 1 736 . + . ID=gene-LDO38_RS09170;Name=LDO38_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09170;old_locus_tag=BVI2075_2020001;partial=true;start_range=.,1 NZ_CAJZAL010000116.1 Protein Homology CDS 1 736 . + 1 ID=cds-WP_224056336.1;Parent=gene-LDO38_RS09170;Dbxref=GenBank:WP_224056336.1;Name=WP_224056336.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488659.1;locus_tag=LDO38_RS09170;partial=true;product=ABC transporter permease;protein_id=WP_224056336.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000116.1 RefSeq gene 730 1281 . + . ID=gene-LDO38_RS09175;Name=LDO38_RS09175;end_range=1281,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09175;partial=true NZ_CAJZAL010000116.1 Protein Homology CDS 730 1281 . + 0 ID=cds-WP_224056337.1;Parent=gene-LDO38_RS09175;Dbxref=GenBank:WP_224056337.1;Name=WP_224056337.1;Ontology_term=GO:0006810,GO:0005215,GO:0005524,GO:0016887,GO:0042626,GO:0140359;end_range=1281,.;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488658.1;locus_tag=LDO38_RS09175;partial=true;product=ABC transporter ATP-binding protein;protein_id=WP_224056337.1;transl_table=11 NZ_CAJZAL010000116.1 RefSeq pseudogene 1296 1533 . + . ID=gene-LDO38_RS09180;Name=LDO38_RS09180;end_range=1533,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS09180;partial=true;pseudo=true NZ_CAJZAL010000116.1 Protein Homology CDS 1296 1533 . + 0 ID=cds-LDO38_RS09180;Parent=gene-LDO38_RS09180;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1533,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217069.1;locus_tag=LDO38_RS09180;partial=true;product=cytochrome c;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000117.1 1 716 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000117.1 RefSeq region 1 716 . + . ID=NZ_CAJZAL010000117.1:1..716;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_203 NZ_CAJZAL010000117.1 cmsearch riboswitch 322 510 . + . ID=id-NZ_CAJZAL010000117.1:322..510;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch ##sequence-region NZ_CAJZAL010000118.1 1 2212 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000118.1 RefSeq region 1 2212 . + . ID=NZ_CAJZAL010000118.1:1..2212;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_204 NZ_CAJZAL010000118.1 RefSeq pseudogene 1 270 . + . ID=gene-LDO38_RS30500;Name=LDO38_RS30500;end_range=270,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30500;old_locus_tag=BVI2075_2040001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000118.1 Protein Homology CDS 1 270 . + 0 ID=cds-LDO38_RS30500;Parent=gene-LDO38_RS30500;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=270,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884386.1;locus_tag=LDO38_RS30500;partial=true;product=cellulose biosynthesis protein BcsE;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000118.1 RefSeq gene 281 1529 . + . ID=gene-LDO38_RS09190;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=LDO38_RS09190;old_locus_tag=BVI2075_2040002;partial=true;start_range=.,281 NZ_CAJZAL010000118.1 Protein Homology CDS 281 1529 . + 1 ID=cds-WP_435520930.1;Parent=gene-LDO38_RS09190;Dbxref=GenBank:WP_435520930.1;Name=WP_435520930.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884386.1;locus_tag=LDO38_RS09190;partial=true;product=cellulose biosynthesis protein BcsE;protein_id=WP_435520930.1;start_range=.,281;transl_table=11 NZ_CAJZAL010000118.1 RefSeq gene 1526 1735 . + . ID=gene-LDO38_RS09195;Name=LDO38_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09195;old_locus_tag=BVI2075_2040004 NZ_CAJZAL010000118.1 Protein Homology CDS 1526 1735 . + 0 ID=cds-WP_046429078.1;Parent=gene-LDO38_RS09195;Dbxref=GenBank:WP_046429078.1;Name=WP_046429078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884388.1;locus_tag=LDO38_RS09195;product=hypothetical protein;protein_id=WP_046429078.1;transl_table=11 NZ_CAJZAL010000118.1 RefSeq gene 1732 2212 . + . ID=gene-LDO38_RS09200;Name=LDO38_RS09200;end_range=2212,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09200;partial=true NZ_CAJZAL010000118.1 Protein Homology CDS 1732 2212 . + 0 ID=cds-WP_224056338.1;Parent=gene-LDO38_RS09200;Dbxref=GenBank:WP_224056338.1;Name=WP_224056338.1;end_range=2212,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656584.1;locus_tag=LDO38_RS09200;partial=true;product=cellulose synthase operon protein YhjQ/BcsQ;protein_id=WP_224056338.1;transl_table=11 ##sequence-region NZ_CAJZAL010000119.1 1 1322 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000119.1 RefSeq region 1 1322 . + . ID=NZ_CAJZAL010000119.1:1..1322;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_205 NZ_CAJZAL010000119.1 RefSeq gene 1 1242 . + . ID=gene-LDO38_RS09205;Name=LDO38_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09205;old_locus_tag=BVI2075_2050001;partial=true;start_range=.,1 NZ_CAJZAL010000119.1 Protein Homology CDS 1 1242 . + 0 ID=cds-WP_224056339.1;Parent=gene-LDO38_RS09205;Dbxref=GenBank:WP_224056339.1;Name=WP_224056339.1;Ontology_term=GO:0030244,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405017.1;locus_tag=LDO38_RS09205;partial=true;product=cellulose synthase subunit BcsC-related outer membrane protein;protein_id=WP_224056339.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAL010000120.1 1 951 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000120.1 RefSeq region 1 951 . + . ID=NZ_CAJZAL010000120.1:1..951;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_206 NZ_CAJZAL010000120.1 cmsearch riboswitch 1 188 . + . ID=id-NZ_CAJZAL010000120.1:1..188;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;partial=true;regulatory_class=riboswitch;start_range=.,1 NZ_CAJZAL010000120.1 RefSeq gene 354 951 . + . ID=gene-LDO38_RS09210;Name=cobA;end_range=951,.;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=LDO38_RS09210;partial=true NZ_CAJZAL010000120.1 Protein Homology CDS 354 951 . + 0 ID=cds-WP_224056340.1;Parent=gene-LDO38_RS09210;Dbxref=GenBank:WP_224056340.1;Name=WP_224056340.1;Ontology_term=GO:0019354,GO:0004851;end_range=951,.;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694284.1;locus_tag=LDO38_RS09210;partial=true;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_224056340.1;transl_table=11 ##sequence-region NZ_CAJZAL010000121.1 1 68322 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000121.1 RefSeq region 1 68322 . + . ID=NZ_CAJZAL010000121.1:1..68322;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_21 NZ_CAJZAL010000121.1 RefSeq gene 1 1262 . + . ID=gene-LDO38_RS09215;Name=LDO38_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09215;old_locus_tag=BVI2075_210001;partial=true;start_range=.,1 NZ_CAJZAL010000121.1 Protein Homology CDS 1 1262 . + 2 ID=cds-WP_224056341.1;Parent=gene-LDO38_RS09215;Dbxref=GenBank:WP_224056341.1;Name=WP_224056341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498986.1;locus_tag=LDO38_RS09215;partial=true;product=carbohydrate porin;protein_id=WP_224056341.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 1555 1941 . - . ID=gene-LDO38_RS09220;Name=LDO38_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09220;old_locus_tag=BVI2075_210003 NZ_CAJZAL010000121.1 Protein Homology CDS 1555 1941 . - 0 ID=cds-WP_080957615.1;Parent=gene-LDO38_RS09220;Dbxref=GenBank:WP_080957615.1;Name=WP_080957615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007584244.1;locus_tag=LDO38_RS09220;product=hypothetical protein;protein_id=WP_080957615.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 2161 3864 . - . ID=gene-LDO38_RS09225;Name=treA;gbkey=Gene;gene=treA;gene_biotype=protein_coding;locus_tag=LDO38_RS09225;old_locus_tag=BVI2075_210004 NZ_CAJZAL010000121.1 Protein Homology CDS 2161 3864 . - 0 ID=cds-WP_069246446.1;Parent=gene-LDO38_RS09225;Dbxref=GenBank:WP_069246446.1;Name=WP_069246446.1;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;gene=treA;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547286.1;locus_tag=LDO38_RS09225;product=alpha%2Calpha-trehalase TreA;protein_id=WP_069246446.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 4172 5560 . + . ID=gene-LDO38_RS09230;Name=LDO38_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09230;old_locus_tag=BVI2075_210006 NZ_CAJZAL010000121.1 Protein Homology CDS 4172 5560 . + 0 ID=cds-WP_014725415.1;Parent=gene-LDO38_RS09230;Dbxref=GenBank:WP_014725415.1;Name=WP_014725415.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760208.1;locus_tag=LDO38_RS09230;product=MFS transporter;protein_id=WP_014725415.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 5895 7106 . + . ID=gene-LDO38_RS09235;Name=LDO38_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09235;old_locus_tag=BVI2075_210007 NZ_CAJZAL010000121.1 Protein Homology CDS 5895 7106 . + 0 ID=cds-WP_069246445.1;Parent=gene-LDO38_RS09235;Dbxref=GenBank:WP_069246445.1;Name=WP_069246445.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760725.1;locus_tag=LDO38_RS09235;product=winged helix-turn-helix domain-containing protein;protein_id=WP_069246445.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 7147 8256 . - . ID=gene-LDO38_RS09240;Name=LDO38_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09240;old_locus_tag=BVI2075_210008 NZ_CAJZAL010000121.1 Protein Homology CDS 7147 8256 . - 0 ID=cds-WP_011882624.1;Parent=gene-LDO38_RS09240;Dbxref=GenBank:WP_011882624.1;Name=WP_011882624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882624.1;locus_tag=LDO38_RS09240;product=alpha/beta fold hydrolase;protein_id=WP_011882624.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 8253 9473 . - . ID=gene-LDO38_RS09245;Name=LDO38_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09245;old_locus_tag=BVI2075_210009 NZ_CAJZAL010000121.1 Protein Homology CDS 8253 9473 . - 0 ID=cds-WP_011882625.1;Parent=gene-LDO38_RS09245;Dbxref=GenBank:WP_011882625.1;Name=WP_011882625.1;Ontology_term=GO:0006082,GO:0016310,GO:0000287,GO:0005524,GO:0016301,GO:0016774;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C carboxyl group as acceptor|0016774||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725418.1;locus_tag=LDO38_RS09245;product=acetate/propionate family kinase;protein_id=WP_011882625.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 9485 10603 . - . ID=gene-LDO38_RS09250;Name=LDO38_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09250;old_locus_tag=BVI2075_210010 NZ_CAJZAL010000121.1 Protein Homology CDS 9485 10603 . - 0 ID=cds-WP_418219603.1;Parent=gene-LDO38_RS09250;Dbxref=GenBank:WP_418219603.1;Name=WP_418219603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882626.1;locus_tag=LDO38_RS09250;product=phosphate acetyltransferase;protein_id=WP_418219603.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 10689 11558 . + . ID=gene-LDO38_RS09255;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=LDO38_RS09255;old_locus_tag=BVI2075_210011 NZ_CAJZAL010000121.1 Protein Homology CDS 10689 11558 . + 0 ID=cds-WP_034194551.1;Parent=gene-LDO38_RS09255;Dbxref=GenBank:WP_034194551.1;Name=WP_034194551.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547278.1;locus_tag=LDO38_RS09255;product=ATP synthase F1 subunit gamma;protein_id=WP_034194551.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 11578 12033 . + . ID=gene-LDO38_RS09260;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=LDO38_RS09260;old_locus_tag=BVI2075_210012 NZ_CAJZAL010000121.1 Protein Homology CDS 11578 12033 . + 0 ID=cds-WP_011882628.1;Parent=gene-LDO38_RS09260;Dbxref=GenBank:WP_011882628.1;Name=WP_011882628.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpC;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882628.1;locus_tag=LDO38_RS09260;product=ATP synthase F1 subunit epsilon;protein_id=WP_011882628.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 12066 12284 . - . ID=gene-LDO38_RS09265;Name=LDO38_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09265;old_locus_tag=BVI2075_210013 NZ_CAJZAL010000121.1 Protein Homology CDS 12066 12284 . - 0 ID=cds-WP_009687837.1;Parent=gene-LDO38_RS09265;Dbxref=GenBank:WP_009687837.1;Name=WP_009687837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366505.1;locus_tag=LDO38_RS09265;product=DUF1653 domain-containing protein;protein_id=WP_009687837.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 12360 12803 . - . ID=gene-LDO38_RS09270;Name=LDO38_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09270;old_locus_tag=BVI2075_210014 NZ_CAJZAL010000121.1 Protein Homology CDS 12360 12803 . - 0 ID=cds-WP_059463039.1;Parent=gene-LDO38_RS09270;Dbxref=GenBank:WP_059463039.1;Name=WP_059463039.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760724.1;locus_tag=LDO38_RS09270;product=GNAT family N-acetyltransferase;protein_id=WP_059463039.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 12996 13619 . + . ID=gene-LDO38_RS09275;Name=LDO38_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09275;old_locus_tag=BVI2075_210015 NZ_CAJZAL010000121.1 Protein Homology CDS 12996 13619 . + 0 ID=cds-WP_046423882.1;Parent=gene-LDO38_RS09275;Dbxref=GenBank:WP_046423882.1;Name=WP_046423882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547273.1;locus_tag=LDO38_RS09275;product=HAD hydrolase-like protein;protein_id=WP_046423882.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 13990 14562 . + . ID=gene-LDO38_RS09280;Name=LDO38_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09280;old_locus_tag=BVI2075_210016 NZ_CAJZAL010000121.1 Protein Homology CDS 13990 14562 . + 0 ID=cds-WP_046423732.1;Parent=gene-LDO38_RS09280;Dbxref=GenBank:WP_046423732.1;Name=WP_046423732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760722.1;locus_tag=LDO38_RS09280;product=DUF4142 domain-containing protein;protein_id=WP_046423732.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 14674 15273 . - . ID=gene-LDO38_RS09285;Name=LDO38_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09285;old_locus_tag=BVI2075_210017 NZ_CAJZAL010000121.1 Protein Homology CDS 14674 15273 . - 0 ID=cds-WP_059621766.1;Parent=gene-LDO38_RS09285;Dbxref=GenBank:WP_059621766.1;Name=WP_059621766.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498978.1;locus_tag=LDO38_RS09285;product=GNAT family N-acetyltransferase;protein_id=WP_059621766.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 15342 16256 . - . ID=gene-LDO38_RS09290;Name=LDO38_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09290;old_locus_tag=BVI2075_210018 NZ_CAJZAL010000121.1 Protein Homology CDS 15342 16256 . - 0 ID=cds-WP_045577802.1;Parent=gene-LDO38_RS09290;Dbxref=GenBank:WP_045577802.1;Name=WP_045577802.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760720.1;locus_tag=LDO38_RS09290;product=LysR family transcriptional regulator;protein_id=WP_045577802.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 16366 17604 . + . ID=gene-LDO38_RS09295;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=LDO38_RS09295;old_locus_tag=BVI2075_210019 NZ_CAJZAL010000121.1 Protein Homology CDS 16366 17604 . + 0 ID=cds-WP_046423731.1;Parent=gene-LDO38_RS09295;Dbxref=GenBank:WP_046423731.1;Name=WP_046423731.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760719.1;locus_tag=LDO38_RS09295;product=diaminopimelate decarboxylase;protein_id=WP_046423731.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 17771 18658 . - . ID=gene-LDO38_RS09300;Name=LDO38_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09300;old_locus_tag=BVI2075_210020 NZ_CAJZAL010000121.1 Protein Homology CDS 17771 18658 . - 0 ID=cds-WP_034194546.1;Parent=gene-LDO38_RS09300;Dbxref=GenBank:WP_034194546.1;Name=WP_034194546.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766260.1;locus_tag=LDO38_RS09300;product=DMT family transporter;protein_id=WP_034194546.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 18784 20250 . + . ID=gene-LDO38_RS09305;Name=LDO38_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09305;old_locus_tag=BVI2075_210021 NZ_CAJZAL010000121.1 Protein Homology CDS 18784 20250 . + 0 ID=cds-WP_059463037.1;Parent=gene-LDO38_RS09305;Dbxref=GenBank:WP_059463037.1;Name=WP_059463037.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491196.1;locus_tag=LDO38_RS09305;product=PLP-dependent aminotransferase family protein;protein_id=WP_059463037.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 20354 21787 . - . ID=gene-LDO38_RS09310;Name=LDO38_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09310;old_locus_tag=BVI2075_210022 NZ_CAJZAL010000121.1 Protein Homology CDS 20354 21787 . - 0 ID=cds-WP_045577799.1;Parent=gene-LDO38_RS09310;Dbxref=GenBank:WP_045577799.1;Name=WP_045577799.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339667.1;locus_tag=LDO38_RS09310;product=nicotinate phosphoribosyltransferase;protein_id=WP_045577799.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 21862 22902 . - . ID=gene-LDO38_RS09315;Name=LDO38_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09315;old_locus_tag=BVI2075_210023 NZ_CAJZAL010000121.1 Protein Homology CDS 21862 22902 . - 0 ID=cds-WP_059463035.1;Parent=gene-LDO38_RS09315;Dbxref=GenBank:WP_059463035.1;Name=WP_059463035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366534.1;locus_tag=LDO38_RS09315;product=bifunctional nicotinamide-nucleotide adenylyltransferase/Nudix hydroxylase;protein_id=WP_059463035.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 23231 23992 . + . ID=gene-LDO38_RS09320;Name=LDO38_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09320;old_locus_tag=BVI2075_210025 NZ_CAJZAL010000121.1 Protein Homology CDS 23231 23992 . + 0 ID=cds-WP_059463034.1;Parent=gene-LDO38_RS09320;Dbxref=GenBank:WP_059463034.1;Name=WP_059463034.1;Ontology_term=GO:0008745,GO:0046872;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659261.1;locus_tag=LDO38_RS09320;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=WP_059463034.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 24042 24431 . + . ID=gene-LDO38_RS09325;Name=LDO38_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09325;old_locus_tag=BVI2075_210026 NZ_CAJZAL010000121.1 Protein Homology CDS 24042 24431 . + 0 ID=cds-WP_014725429.1;Parent=gene-LDO38_RS09325;Dbxref=GenBank:WP_014725429.1;Name=WP_014725429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547257.1;locus_tag=LDO38_RS09325;product=lysozyme inhibitor LprI family protein;protein_id=WP_014725429.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 24497 25843 . - . ID=gene-LDO38_RS09330;Name=LDO38_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09330;old_locus_tag=BVI2075_210027 NZ_CAJZAL010000121.1 Protein Homology CDS 24497 25843 . - 0 ID=cds-WP_011882641.1;Parent=gene-LDO38_RS09330;Dbxref=GenBank:WP_011882641.1;Name=WP_011882641.1;Ontology_term=GO:0006542,GO:0004356,GO:0005524,GO:0046872;gbkey=CDS;go_function=glutamine synthetase activity|0004356||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216584.1;locus_tag=LDO38_RS09330;product=glutamine synthetase family protein;protein_id=WP_011882641.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 25985 26542 . - . ID=gene-LDO38_RS09335;Name=LDO38_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09335;old_locus_tag=BVI2075_210028 NZ_CAJZAL010000121.1 Protein Homology CDS 25985 26542 . - 0 ID=cds-WP_059888365.1;Parent=gene-LDO38_RS09335;Dbxref=GenBank:WP_059888365.1;Name=WP_059888365.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659265.1;locus_tag=LDO38_RS09335;product=helix-turn-helix domain-containing protein;protein_id=WP_059888365.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 26559 27848 . - . ID=gene-LDO38_RS09340;Name=LDO38_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09340;old_locus_tag=BVI2075_210029 NZ_CAJZAL010000121.1 Protein Homology CDS 26559 27848 . - 0 ID=cds-WP_069246443.1;Parent=gene-LDO38_RS09340;Dbxref=GenBank:WP_069246443.1;Name=WP_069246443.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751385.1;locus_tag=LDO38_RS09340;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_069246443.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 29280 30683 . + . ID=gene-LDO38_RS09350;Name=LDO38_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09350;old_locus_tag=BVI2075_210031 NZ_CAJZAL010000121.1 Protein Homology CDS 29280 30683 . + 0 ID=cds-WP_059463032.1;Parent=gene-LDO38_RS09350;Dbxref=GenBank:WP_059463032.1;Name=WP_059463032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882644.1;locus_tag=LDO38_RS09350;product=sensor histidine kinase;protein_id=WP_059463032.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 30741 31238 . - . ID=gene-LDO38_RS09355;Name=LDO38_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09355;old_locus_tag=BVI2075_210032 NZ_CAJZAL010000121.1 Protein Homology CDS 30741 31238 . - 0 ID=cds-WP_011882645.1;Parent=gene-LDO38_RS09355;Dbxref=GenBank:WP_011882645.1;Name=WP_011882645.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882645.1;locus_tag=LDO38_RS09355;product=acyl-CoA thioesterase;protein_id=WP_011882645.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 31463 32449 . + . ID=gene-LDO38_RS09360;Name=LDO38_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09360;old_locus_tag=BVI2075_210034 NZ_CAJZAL010000121.1 Protein Homology CDS 31463 32449 . + 0 ID=cds-WP_011882646.1;Parent=gene-LDO38_RS09360;Dbxref=GenBank:WP_011882646.1;Name=WP_011882646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882646.1;locus_tag=LDO38_RS09360;product=response regulator;protein_id=WP_011882646.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 32802 33668 . - . ID=gene-LDO38_RS09365;Name=LDO38_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09365;old_locus_tag=BVI2075_210037 NZ_CAJZAL010000121.1 Protein Homology CDS 32802 33668 . - 0 ID=cds-WP_011882647.1;Parent=gene-LDO38_RS09365;Dbxref=GenBank:WP_011882647.1;Name=WP_011882647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882647.1;locus_tag=LDO38_RS09365;product=alpha/beta fold hydrolase;protein_id=WP_011882647.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 33683 34936 . - . ID=gene-LDO38_RS09370;Name=mhpT;gbkey=Gene;gene=mhpT;gene_biotype=protein_coding;locus_tag=LDO38_RS09370;old_locus_tag=BVI2075_210038 NZ_CAJZAL010000121.1 Protein Homology CDS 33683 34936 . - 0 ID=cds-WP_059562552.1;Parent=gene-LDO38_RS09370;Dbxref=GenBank:WP_059562552.1;Name=WP_059562552.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mhpT;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882648.1;locus_tag=LDO38_RS09370;product=3-(3-hydroxy-phenyl)propionate transporter MhpT;protein_id=WP_059562552.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 34995 36017 . - . ID=gene-LDO38_RS09375;Name=dmpG;gbkey=Gene;gene=dmpG;gene_biotype=protein_coding;locus_tag=LDO38_RS09375;old_locus_tag=BVI2075_210039 NZ_CAJZAL010000121.1 Protein Homology CDS 34995 36017 . - 0 ID=cds-WP_319000444.1;Parent=gene-LDO38_RS09375;Dbxref=GenBank:WP_319000444.1;Name=WP_319000444.1;Ontology_term=GO:0009056,GO:0008701;gbkey=CDS;gene=dmpG;go_function=4-hydroxy-2-oxovalerate aldolase activity|0008701||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013956759.1;locus_tag=LDO38_RS09375;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_319000444.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 36033 36980 . - . ID=gene-LDO38_RS09380;Name=LDO38_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09380;old_locus_tag=BVI2075_210040 NZ_CAJZAL010000121.1 Protein Homology CDS 36033 36980 . - 0 ID=cds-WP_059475068.1;Parent=gene-LDO38_RS09380;Dbxref=GenBank:WP_059475068.1;Name=WP_059475068.1;Ontology_term=GO:0009056,GO:0008774;gbkey=CDS;go_function=acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882650.1;locus_tag=LDO38_RS09380;product=acetaldehyde dehydrogenase (acetylating);protein_id=WP_059475068.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 36998 37786 . - . ID=gene-LDO38_RS09385;Name=mhpD;gbkey=Gene;gene=mhpD;gene_biotype=protein_coding;locus_tag=LDO38_RS09385;old_locus_tag=BVI2075_210041 NZ_CAJZAL010000121.1 Protein Homology CDS 36998 37786 . - 0 ID=cds-WP_224056343.1;Parent=gene-LDO38_RS09385;Dbxref=GenBank:WP_224056343.1;Name=WP_224056343.1;Ontology_term=GO:0009056,GO:0008684,GO:0030145;gbkey=CDS;gene=mhpD;go_function=2-oxopent-4-enoate hydratase activity|0008684||IEA,manganese ion binding|0030145||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725435.1;locus_tag=LDO38_RS09385;product=2-keto-4-pentenoate hydratase;protein_id=WP_224056343.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 37791 38744 . - . ID=gene-LDO38_RS09390;Name=LDO38_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09390;old_locus_tag=BVI2075_210042 NZ_CAJZAL010000121.1 Protein Homology CDS 37791 38744 . - 0 ID=cds-WP_059456000.1;Parent=gene-LDO38_RS09390;Dbxref=GenBank:WP_059456000.1;Name=WP_059456000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725436.1;locus_tag=LDO38_RS09390;product=3-carboxyethylcatechol 2%2C3-dioxygenase;protein_id=WP_059456000.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 38746 40593 . - . ID=gene-LDO38_RS09395;Name=LDO38_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09395;old_locus_tag=BVI2075_210043 NZ_CAJZAL010000121.1 Protein Homology CDS 38746 40593 . - 0 ID=cds-WP_212196346.1;Parent=gene-LDO38_RS09395;Dbxref=GenBank:WP_212196346.1;Name=WP_212196346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882653.1;locus_tag=LDO38_RS09395;product=bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;protein_id=WP_212196346.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 40758 41570 . + . ID=gene-LDO38_RS09400;Name=LDO38_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09400;old_locus_tag=BVI2075_210044 NZ_CAJZAL010000121.1 Protein Homology CDS 40758 41570 . + 0 ID=cds-WP_224056344.1;Parent=gene-LDO38_RS09400;Dbxref=GenBank:WP_224056344.1;Name=WP_224056344.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882654.1;locus_tag=LDO38_RS09400;product=DNA-binding transcriptional regulator;protein_id=WP_224056344.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 41850 43088 . - . ID=gene-LDO38_RS09405;Name=LDO38_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09405;old_locus_tag=BVI2075_210045 NZ_CAJZAL010000121.1 Protein Homology CDS 41850 43088 . - 0 ID=cds-WP_011882655.1;Parent=gene-LDO38_RS09405;Dbxref=GenBank:WP_011882655.1;Name=WP_011882655.1;Ontology_term=GO:0006790,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412816.1;locus_tag=LDO38_RS09405;product=SfnB family sulfur acquisition oxidoreductase;protein_id=WP_011882655.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 43376 44635 . + . ID=gene-LDO38_RS09410;Name=LDO38_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09410;old_locus_tag=BVI2075_210046 NZ_CAJZAL010000121.1 Protein Homology CDS 43376 44635 . + 0 ID=cds-WP_045577793.1;Parent=gene-LDO38_RS09410;Dbxref=GenBank:WP_045577793.1;Name=WP_045577793.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882656.1;locus_tag=LDO38_RS09410;product=acyl-CoA dehydrogenase family protein;protein_id=WP_045577793.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 44632 46032 . + . ID=gene-LDO38_RS09415;Name=LDO38_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09415;old_locus_tag=BVI2075_210047 NZ_CAJZAL010000121.1 Protein Homology CDS 44632 46032 . + 0 ID=cds-WP_045577792.1;Parent=gene-LDO38_RS09415;Dbxref=GenBank:WP_045577792.1;Name=WP_045577792.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549909.1;locus_tag=LDO38_RS09415;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_045577792.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 46147 47574 . - . ID=gene-LDO38_RS09420;Name=LDO38_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09420;old_locus_tag=BVI2075_210048 NZ_CAJZAL010000121.1 Protein Homology CDS 46147 47574 . - 0 ID=cds-WP_059694418.1;Parent=gene-LDO38_RS09420;Dbxref=GenBank:WP_059694418.1;Name=WP_059694418.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882658.1;locus_tag=LDO38_RS09420;product=MFS transporter;protein_id=WP_059694418.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 47904 48764 . - . ID=gene-LDO38_RS09425;Name=LDO38_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09425;old_locus_tag=BVI2075_210049 NZ_CAJZAL010000121.1 Protein Homology CDS 47904 48764 . - 0 ID=cds-WP_224056345.1;Parent=gene-LDO38_RS09425;Dbxref=GenBank:WP_224056345.1;Name=WP_224056345.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882659.1;locus_tag=LDO38_RS09425;product=HpcH/HpaI aldolase/citrate lyase family protein;protein_id=WP_224056345.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 48854 50203 . - . ID=gene-LDO38_RS09430;Name=LDO38_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09430;old_locus_tag=BVI2075_210050 NZ_CAJZAL010000121.1 Protein Homology CDS 48854 50203 . - 0 ID=cds-WP_224056346.1;Parent=gene-LDO38_RS09430;Dbxref=GenBank:WP_224056346.1;Name=WP_224056346.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882660.1;locus_tag=LDO38_RS09430;product=MFS transporter;protein_id=WP_224056346.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 50252 51091 . - . ID=gene-LDO38_RS09435;Name=LDO38_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09435;old_locus_tag=BVI2075_210051 NZ_CAJZAL010000121.1 Protein Homology CDS 50252 51091 . - 0 ID=cds-WP_175995024.1;Parent=gene-LDO38_RS09435;Dbxref=GenBank:WP_175995024.1;Name=WP_175995024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882661.1;locus_tag=LDO38_RS09435;product=FAS1-like dehydratase domain-containing protein;protein_id=WP_175995024.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 51088 52260 . - . ID=gene-LDO38_RS09440;Name=LDO38_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09440;old_locus_tag=BVI2075_210052 NZ_CAJZAL010000121.1 Protein Homology CDS 51088 52260 . - 0 ID=cds-WP_175995023.1;Parent=gene-LDO38_RS09440;Dbxref=GenBank:WP_175995023.1;Name=WP_175995023.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882662.1;locus_tag=LDO38_RS09440;product=CaiB/BaiF CoA transferase family protein;protein_id=WP_175995023.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 52459 53337 . + . ID=gene-LDO38_RS09445;Name=LDO38_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09445;old_locus_tag=BVI2075_210054 NZ_CAJZAL010000121.1 Protein Homology CDS 52459 53337 . + 0 ID=cds-WP_224383328.1;Parent=gene-LDO38_RS09445;Dbxref=GenBank:WP_224383328.1;Name=WP_224383328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882663.1;locus_tag=LDO38_RS09445;product=LysR family transcriptional regulator;protein_id=WP_224383328.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 53363 54523 . - . ID=gene-LDO38_RS09450;Name=LDO38_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09450;old_locus_tag=BVI2075_210055 NZ_CAJZAL010000121.1 Protein Homology CDS 53363 54523 . - 0 ID=cds-WP_011882664.1;Parent=gene-LDO38_RS09450;Dbxref=GenBank:WP_011882664.1;Name=WP_011882664.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882664.1;locus_tag=LDO38_RS09450;product=GGDEF domain-containing protein;protein_id=WP_011882664.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq pseudogene 55035 55145 . - . ID=gene-LDO38_RS09455;Name=LDO38_RS09455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS09455;old_locus_tag=BVI2075_210058;partial=true;pseudo=true;start_range=.,55035 NZ_CAJZAL010000121.1 Protein Homology CDS 55035 55145 . - 0 ID=cds-LDO38_RS09455;Parent=gene-LDO38_RS09455;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660160.1;locus_tag=LDO38_RS09455;partial=true;product=antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein;pseudo=true;start_range=.,55035;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 55388 56308 . - . ID=gene-LDO38_RS09460;Name=LDO38_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09460;old_locus_tag=BVI2075_210059 NZ_CAJZAL010000121.1 Protein Homology CDS 55388 56308 . - 0 ID=cds-WP_253074553.1;Parent=gene-LDO38_RS09460;Dbxref=GenBank:WP_253074553.1;Name=WP_253074553.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:TIGR01845.1;locus_tag=LDO38_RS09460;product=efflux transporter outer membrane subunit;protein_id=WP_253074553.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq pseudogene 56197 56745 . - . ID=gene-LDO38_RS09465;Name=LDO38_RS09465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS09465;old_locus_tag=BVI2075_210060;partial=true;pseudo=true;start_range=.,56197 NZ_CAJZAL010000121.1 Protein Homology CDS 56197 56745 . - 0 ID=cds-LDO38_RS09465;Parent=gene-LDO38_RS09465;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF014385.6;locus_tag=LDO38_RS09465;partial=true;product=TolC family protein;pseudo=true;start_range=.,56197;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 56745 59945 . - . ID=gene-LDO38_RS09470;Name=bpeB;gbkey=Gene;gene=bpeB;gene_biotype=protein_coding;locus_tag=LDO38_RS09470;old_locus_tag=BVI2075_210061 NZ_CAJZAL010000121.1 Protein Homology CDS 56745 59945 . - 0 ID=cds-WP_011885889.1;Parent=gene-LDO38_RS09470;Dbxref=GenBank:WP_011885889.1;Name=WP_011885889.1;gbkey=CDS;gene=bpeB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398428.1;locus_tag=LDO38_RS09470;product=efflux RND transporter permease BpeB;protein_id=WP_011885889.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 59961 61217 . - . ID=gene-LDO38_RS09475;Name=LDO38_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09475;old_locus_tag=BVI2075_210062 NZ_CAJZAL010000121.1 Protein Homology CDS 59961 61217 . - 0 ID=cds-WP_011885890.1;Parent=gene-LDO38_RS09475;Dbxref=GenBank:WP_011885890.1;Name=WP_011885890.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197561.1;locus_tag=LDO38_RS09475;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_011885890.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 61621 62262 . + . ID=gene-LDO38_RS09480;Name=LDO38_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09480;old_locus_tag=BVI2075_210063 NZ_CAJZAL010000121.1 Protein Homology CDS 61621 62262 . + 0 ID=cds-WP_011885891.1;Parent=gene-LDO38_RS09480;Dbxref=GenBank:WP_011885891.1;Name=WP_011885891.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885891.1;locus_tag=LDO38_RS09480;product=TetR family transcriptional regulator;protein_id=WP_011885891.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 62379 63038 . - . ID=gene-LDO38_RS09485;Name=LDO38_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09485;old_locus_tag=BVI2075_210064 NZ_CAJZAL010000121.1 Protein Homology CDS 62379 63038 . - 0 ID=cds-WP_059475766.1;Parent=gene-LDO38_RS09485;Dbxref=GenBank:WP_059475766.1;Name=WP_059475766.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546095.1;locus_tag=LDO38_RS09485;product=cysteine hydrolase family protein;protein_id=WP_059475766.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 63191 64192 . + . ID=gene-LDO38_RS09490;Name=LDO38_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09490;old_locus_tag=BVI2075_210065 NZ_CAJZAL010000121.1 Protein Homology CDS 63191 64192 . + 0 ID=cds-WP_224056347.1;Parent=gene-LDO38_RS09490;Dbxref=GenBank:WP_224056347.1;Name=WP_224056347.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364600.1;locus_tag=LDO38_RS09490;product=helix-turn-helix domain-containing protein;protein_id=WP_224056347.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 64147 64410 . - . ID=gene-LDO38_RS09495;Name=LDO38_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09495;old_locus_tag=BVI2075_210066 NZ_CAJZAL010000121.1 Protein Homology CDS 64147 64410 . - 0 ID=cds-WP_059461454.1;Parent=gene-LDO38_RS09495;Dbxref=GenBank:WP_059461454.1;Name=WP_059461454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723560.1;locus_tag=LDO38_RS09495;product=hypothetical protein;protein_id=WP_059461454.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 64537 65229 . - . ID=gene-LDO38_RS09500;Name=LDO38_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09500;old_locus_tag=BVI2075_210067 NZ_CAJZAL010000121.1 Protein Homology CDS 64537 65229 . - 0 ID=cds-WP_014723561.1;Parent=gene-LDO38_RS09500;Dbxref=GenBank:WP_014723561.1;Name=WP_014723561.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554577.1;locus_tag=LDO38_RS09500;product=CoxG family protein;protein_id=WP_014723561.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 65258 65617 . - . ID=gene-LDO38_RS09505;Name=LDO38_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09505;old_locus_tag=BVI2075_210068 NZ_CAJZAL010000121.1 Protein Homology CDS 65258 65617 . - 0 ID=cds-WP_011885896.1;Parent=gene-LDO38_RS09505;Dbxref=GenBank:WP_011885896.1;Name=WP_011885896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414694.1;locus_tag=LDO38_RS09505;product=DUF427 domain-containing protein;protein_id=WP_011885896.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 65747 66184 . - . ID=gene-LDO38_RS09510;Name=LDO38_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09510;old_locus_tag=BVI2075_210069 NZ_CAJZAL010000121.1 Protein Homology CDS 65747 66184 . - 0 ID=cds-WP_011885897.1;Parent=gene-LDO38_RS09510;Dbxref=GenBank:WP_011885897.1;Name=WP_011885897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406482.1;locus_tag=LDO38_RS09510;product=carboxypeptidase-like regulatory domain-containing protein;protein_id=WP_011885897.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 66293 67777 . - . ID=gene-LDO38_RS09515;Name=LDO38_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09515;old_locus_tag=BVI2075_210070 NZ_CAJZAL010000121.1 Protein Homology CDS 66293 67777 . - 0 ID=cds-WP_011885898.1;Parent=gene-LDO38_RS09515;Dbxref=GenBank:WP_011885898.1;Name=WP_011885898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398419.1;locus_tag=LDO38_RS09515;product=DegQ family serine endoprotease;protein_id=WP_011885898.1;transl_table=11 NZ_CAJZAL010000121.1 RefSeq gene 67878 68322 . - . ID=gene-LDO38_RS09520;Name=LDO38_RS09520;end_range=68322,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09520;old_locus_tag=BVI2075_210071;partial=true NZ_CAJZAL010000121.1 Protein Homology CDS 67878 68322 . - 1 ID=cds-WP_224056348.1;Parent=gene-LDO38_RS09520;Dbxref=GenBank:WP_224056348.1;Name=WP_224056348.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;end_range=68322,.;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885899.1;locus_tag=LDO38_RS09520;partial=true;product=sensor histidine kinase;protein_id=WP_224056348.1;transl_table=11 ##sequence-region NZ_CAJZAL010000122.1 1 50561 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000122.1 RefSeq region 1 50561 . + . ID=NZ_CAJZAL010000122.1:1..50561;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_22 NZ_CAJZAL010000122.1 RefSeq gene 1 3019 . - . ID=gene-LDO38_RS09525;Name=LDO38_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09525;partial=true;start_range=.,1 NZ_CAJZAL010000122.1 Protein Homology CDS 1 3019 . - 0 ID=cds-WP_224056350.1;Parent=gene-LDO38_RS09525;Dbxref=GenBank:WP_224056350.1;Name=WP_224056350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883278.1;locus_tag=LDO38_RS09525;partial=true;product=ESPR domain-containing protein;protein_id=WP_224056350.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 3647 4558 . - . ID=gene-LDO38_RS09530;Name=LDO38_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09530;old_locus_tag=BVI2075_220003 NZ_CAJZAL010000122.1 Protein Homology CDS 3647 4558 . - 0 ID=cds-WP_059461817.1;Parent=gene-LDO38_RS09530;Dbxref=GenBank:WP_059461817.1;Name=WP_059461817.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255597.1;locus_tag=LDO38_RS09530;product=class II glutamine amidotransferase;protein_id=WP_059461817.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 4768 5832 . + . ID=gene-LDO38_RS09535;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=LDO38_RS09535;old_locus_tag=BVI2075_220006 NZ_CAJZAL010000122.1 Protein Homology CDS 4768 5832 . + 0 ID=cds-WP_034194154.1;Parent=gene-LDO38_RS09535;Dbxref=GenBank:WP_034194154.1;Name=WP_034194154.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333371.1;locus_tag=LDO38_RS09535;product=dihydroorotase;protein_id=WP_034194154.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 5829 6701 . + . ID=gene-LDO38_RS09540;Name=LDO38_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09540;old_locus_tag=BVI2075_220005 NZ_CAJZAL010000122.1 Protein Homology CDS 5829 6701 . + 0 ID=cds-WP_059463860.1;Parent=gene-LDO38_RS09540;Dbxref=GenBank:WP_059463860.1;Name=WP_059463860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214114.1;locus_tag=LDO38_RS09540;product=DUF3025 domain-containing protein;protein_id=WP_059463860.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 6714 7125 . + . ID=gene-LDO38_RS09545;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=LDO38_RS09545;old_locus_tag=BVI2075_MISCRNA14 NZ_CAJZAL010000122.1 cmsearch RNase_P_RNA 6714 7125 . + . ID=rna-LDO38_RS09545;Parent=gene-LDO38_RS09545;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO38_RS09545;product=RNase P RNA component class A NZ_CAJZAL010000122.1 cmsearch exon 6714 7125 . + . ID=exon-LDO38_RS09545-1;Parent=rna-LDO38_RS09545;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO38_RS09545;product=RNase P RNA component class A NZ_CAJZAL010000122.1 RefSeq gene 7194 7658 . - . ID=gene-LDO38_RS09550;Name=LDO38_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09550;old_locus_tag=BVI2075_220009 NZ_CAJZAL010000122.1 Protein Homology CDS 7194 7658 . - 0 ID=cds-WP_072465471.1;Parent=gene-LDO38_RS09550;Dbxref=GenBank:WP_072465471.1;Name=WP_072465471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194160.1;locus_tag=LDO38_RS09550;product=OsmC family protein;protein_id=WP_072465471.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 8234 8539 . - . ID=gene-LDO38_RS09555;Name=LDO38_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09555 NZ_CAJZAL010000122.1 Protein Homology CDS 8234 8539 . - 0 ID=cds-WP_011883282.1;Parent=gene-LDO38_RS09555;Dbxref=GenBank:WP_011883282.1;Name=WP_011883282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883282.1;locus_tag=LDO38_RS09555;product=DUF1090 family protein;protein_id=WP_011883282.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 8851 9279 . + . ID=gene-LDO38_RS09560;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=LDO38_RS09560;old_locus_tag=BVI2075_220012 NZ_CAJZAL010000122.1 Protein Homology CDS 8851 9279 . + 0 ID=cds-WP_009687896.1;Parent=gene-LDO38_RS09560;Dbxref=GenBank:WP_009687896.1;Name=WP_009687896.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008919631.1;locus_tag=LDO38_RS09560;product=50S ribosomal protein L13;protein_id=WP_009687896.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 9291 9683 . + . ID=gene-LDO38_RS09565;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=LDO38_RS09565;old_locus_tag=BVI2075_220013 NZ_CAJZAL010000122.1 Protein Homology CDS 9291 9683 . + 0 ID=cds-WP_011883283.1;Parent=gene-LDO38_RS09565;Dbxref=GenBank:WP_011883283.1;Name=WP_011883283.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019447061.1;locus_tag=LDO38_RS09565;product=30S ribosomal protein S9;protein_id=WP_011883283.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 9891 10262 . + . ID=gene-LDO38_RS09570;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=LDO38_RS09570;old_locus_tag=BVI2075_220014 NZ_CAJZAL010000122.1 Protein Homology CDS 9891 10262 . + 0 ID=cds-WP_011883284.1;Parent=gene-LDO38_RS09570;Dbxref=GenBank:WP_011883284.1;Name=WP_011883284.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600516.1;locus_tag=LDO38_RS09570;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_011883284.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq pseudogene 10353 11462 . - . ID=gene-LDO38_RS09575;Name=LDO38_RS09575;end_range=11462,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS09575;old_locus_tag=BVI2075_220015;partial=true;pseudo=true NZ_CAJZAL010000122.1 Protein Homology CDS 10353 11462 . - 0 ID=cds-LDO38_RS09575;Parent=gene-LDO38_RS09575;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=11462,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015647.6;locus_tag=LDO38_RS09575;partial=true;product=anhydro-N-acetylmuramic acid kinase;pseudo=true;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 11644 12885 . + . ID=gene-LDO38_RS09580;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=LDO38_RS09580;old_locus_tag=BVI2075_220016 NZ_CAJZAL010000122.1 Protein Homology CDS 11644 12885 . + 0 ID=cds-WP_011883286.1;Parent=gene-LDO38_RS09580;Dbxref=GenBank:WP_011883286.1;Name=WP_011883286.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350958.1;locus_tag=LDO38_RS09580;product=tyrosine--tRNA ligase;protein_id=WP_011883286.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 12882 13340 . + . ID=gene-LDO38_RS09585;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=LDO38_RS09585;old_locus_tag=BVI2075_220017 NZ_CAJZAL010000122.1 Protein Homology CDS 12882 13340 . + 0 ID=cds-WP_034194152.1;Parent=gene-LDO38_RS09585;Dbxref=GenBank:WP_034194152.1;Name=WP_034194152.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091359.1;locus_tag=LDO38_RS09585;product=D-aminoacyl-tRNA deacylase;protein_id=WP_034194152.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 13364 14026 . + . ID=gene-LDO38_RS09590;Name=LDO38_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09590;old_locus_tag=BVI2075_220018 NZ_CAJZAL010000122.1 Protein Homology CDS 13364 14026 . + 0 ID=cds-WP_059622005.1;Parent=gene-LDO38_RS09590;Dbxref=GenBank:WP_059622005.1;Name=WP_059622005.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009903982.1;locus_tag=LDO38_RS09590;product=histidine phosphatase family protein;protein_id=WP_059622005.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 14137 15090 . - . ID=gene-LDO38_RS09595;Name=LDO38_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09595;old_locus_tag=BVI2075_220019 NZ_CAJZAL010000122.1 Protein Homology CDS 14137 15090 . - 0 ID=cds-WP_046425598.1;Parent=gene-LDO38_RS09595;Dbxref=GenBank:WP_046425598.1;Name=WP_046425598.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350962.1;locus_tag=LDO38_RS09595;product=oxygenase MpaB family protein;protein_id=WP_046425598.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 15120 16187 . - . ID=gene-LDO38_RS09600;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=LDO38_RS09600;old_locus_tag=BVI2075_220020 NZ_CAJZAL010000122.1 Protein Homology CDS 15120 16187 . - 0 ID=cds-WP_011883290.1;Parent=gene-LDO38_RS09600;Dbxref=GenBank:WP_011883290.1;Name=WP_011883290.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883290.1;locus_tag=LDO38_RS09600;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_011883290.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 16296 16877 . - . ID=gene-LDO38_RS09605;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=LDO38_RS09605;old_locus_tag=BVI2075_220021 NZ_CAJZAL010000122.1 Protein Homology CDS 16296 16877 . - 0 ID=cds-WP_011883291.1;Parent=gene-LDO38_RS09605;Dbxref=GenBank:WP_011883291.1;Name=WP_011883291.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069298.1;locus_tag=LDO38_RS09605;product=Holliday junction branch migration protein RuvA;protein_id=WP_011883291.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 17095 17637 . - . ID=gene-LDO38_RS09610;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=LDO38_RS09610;old_locus_tag=BVI2075_220022 NZ_CAJZAL010000122.1 Protein Homology CDS 17095 17637 . - 0 ID=cds-WP_011883292.1;Parent=gene-LDO38_RS09610;Dbxref=GenBank:WP_011883292.1;Name=WP_011883292.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401929.1;locus_tag=LDO38_RS09610;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_011883292.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 17789 19354 . - . ID=gene-LDO38_RS09615;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=LDO38_RS09615;old_locus_tag=BVI2075_220023 NZ_CAJZAL010000122.1 Protein Homology CDS 17789 19354 . - 0 ID=cds-WP_014722454.1;Parent=gene-LDO38_RS09615;Dbxref=GenBank:WP_014722454.1;Name=WP_014722454.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069295.1;locus_tag=LDO38_RS09615;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_014722454.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 19399 19632 . - . ID=gene-LDO38_RS09620;Name=LDO38_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09620;old_locus_tag=BVI2075_220024 NZ_CAJZAL010000122.1 Protein Homology CDS 19399 19632 . - 0 ID=cds-WP_006476892.1;Parent=gene-LDO38_RS09620;Dbxref=GenBank:WP_006476892.1;Name=WP_006476892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013436270.1;locus_tag=LDO38_RS09620;product=Fis family transcriptional regulator;protein_id=WP_006476892.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 19629 20696 . - . ID=gene-LDO38_RS09625;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=LDO38_RS09625;old_locus_tag=BVI2075_220025 NZ_CAJZAL010000122.1 Protein Homology CDS 19629 20696 . - 0 ID=cds-WP_011883294.1;Parent=gene-LDO38_RS09625;Dbxref=GenBank:WP_011883294.1;Name=WP_011883294.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401674.1;locus_tag=LDO38_RS09625;product=tRNA dihydrouridine synthase DusB;protein_id=WP_011883294.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 21065 22252 . - . ID=gene-LDO38_RS09630;Name=LDO38_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09630;old_locus_tag=BVI2075_220026 NZ_CAJZAL010000122.1 Protein Homology CDS 21065 22252 . - 0 ID=cds-WP_011883295.1;Parent=gene-LDO38_RS09630;Dbxref=GenBank:WP_011883295.1;Name=WP_011883295.1;Ontology_term=GO:0006744,GO:0016705,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350968.1;locus_tag=LDO38_RS09630;product=UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase;protein_id=WP_011883295.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 22404 23801 . - . ID=gene-LDO38_RS09635;Name=LDO38_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09635;old_locus_tag=BVI2075_220027 NZ_CAJZAL010000122.1 Protein Homology CDS 22404 23801 . - 0 ID=cds-WP_059474737.1;Parent=gene-LDO38_RS09635;Dbxref=GenBank:WP_059474737.1;Name=WP_059474737.1;Ontology_term=GO:0030145,GO:0070006;gbkey=CDS;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722455.1;locus_tag=LDO38_RS09635;product=aminopeptidase P N-terminal domain-containing protein;protein_id=WP_059474737.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 23974 24588 . + . ID=gene-LDO38_RS09640;Name=LDO38_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09640;old_locus_tag=BVI2075_220028 NZ_CAJZAL010000122.1 Protein Homology CDS 23974 24588 . + 0 ID=cds-WP_069246138.1;Parent=gene-LDO38_RS09640;Dbxref=GenBank:WP_069246138.1;Name=WP_069246138.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214107.1;locus_tag=LDO38_RS09640;product=glutathione S-transferase family protein;protein_id=WP_069246138.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 24736 26355 . - . ID=gene-LDO38_RS09645;Name=LDO38_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09645;old_locus_tag=BVI2075_220029 NZ_CAJZAL010000122.1 Protein Homology CDS 24736 26355 . - 0 ID=cds-WP_059896307.1;Parent=gene-LDO38_RS09645;Dbxref=GenBank:WP_059896307.1;Name=WP_059896307.1;Ontology_term=GO:0006537,GO:0015930,GO:0016638;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;go_process=glutamate biosynthetic process|0006537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327911.1;locus_tag=LDO38_RS09645;product=FMN-binding glutamate synthase family protein;protein_id=WP_059896307.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 26471 27625 . - . ID=gene-LDO38_RS09650;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=LDO38_RS09650;old_locus_tag=BVI2075_220030 NZ_CAJZAL010000122.1 Protein Homology CDS 26471 27625 . - 0 ID=cds-WP_011883299.1;Parent=gene-LDO38_RS09650;Dbxref=GenBank:WP_011883299.1;Name=WP_011883299.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492953.1;locus_tag=LDO38_RS09650;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_011883299.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 27622 28131 . - . ID=gene-LDO38_RS09655;Name=LDO38_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09655;old_locus_tag=BVI2075_220031 NZ_CAJZAL010000122.1 Protein Homology CDS 27622 28131 . - 0 ID=cds-WP_011883300.1;Parent=gene-LDO38_RS09655;Dbxref=GenBank:WP_011883300.1;Name=WP_011883300.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194031.1;locus_tag=LDO38_RS09655;product=NUDIX hydrolase;protein_id=WP_011883300.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 28238 29158 . - . ID=gene-LDO38_RS09660;Name=LDO38_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09660;old_locus_tag=BVI2075_220033 NZ_CAJZAL010000122.1 Protein Homology CDS 28238 29158 . - 0 ID=cds-WP_059474736.1;Parent=gene-LDO38_RS09660;Dbxref=GenBank:WP_059474736.1;Name=WP_059474736.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722457.1;locus_tag=LDO38_RS09660;product=LysR family transcriptional regulator;protein_id=WP_059474736.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 29267 30190 . + . ID=gene-LDO38_RS09665;Name=LDO38_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09665;old_locus_tag=BVI2075_220032 NZ_CAJZAL010000122.1 Protein Homology CDS 29267 30190 . + 0 ID=cds-WP_011883302.1;Parent=gene-LDO38_RS09665;Dbxref=GenBank:WP_011883302.1;Name=WP_011883302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327917.1;locus_tag=LDO38_RS09665;product=carbon-nitrogen hydrolase family protein;protein_id=WP_011883302.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 30384 31070 . - . ID=gene-LDO38_RS09670;Name=LDO38_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09670;old_locus_tag=BVI2075_220034 NZ_CAJZAL010000122.1 Protein Homology CDS 30384 31070 . - 0 ID=cds-WP_069246139.1;Parent=gene-LDO38_RS09670;Dbxref=GenBank:WP_069246139.1;Name=WP_069246139.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722459.1;locus_tag=LDO38_RS09670;product=helix-turn-helix transcriptional regulator;protein_id=WP_069246139.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 31144 31560 . - . ID=gene-LDO38_RS09675;Name=LDO38_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09675;old_locus_tag=BVI2075_220035 NZ_CAJZAL010000122.1 Protein Homology CDS 31144 31560 . - 0 ID=cds-WP_011883304.1;Parent=gene-LDO38_RS09675;Dbxref=GenBank:WP_011883304.1;Name=WP_011883304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751908.1;locus_tag=LDO38_RS09675;product=VOC family protein;protein_id=WP_011883304.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 31903 33201 . - . ID=gene-LDO38_RS09680;Name=LDO38_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09680;old_locus_tag=BVI2075_220036 NZ_CAJZAL010000122.1 Protein Homology CDS 31903 33201 . - 0 ID=cds-WP_014722460.1;Parent=gene-LDO38_RS09680;Dbxref=GenBank:WP_014722460.1;Name=WP_014722460.1;Ontology_term=GO:0001510,GO:0008757,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333399.1;locus_tag=LDO38_RS09680;product=THUMP domain-containing class I SAM-dependent RNA methyltransferase;protein_id=WP_014722460.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 33391 35514 . - . ID=gene-LDO38_RS09685;Name=LDO38_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09685;old_locus_tag=BVI2075_220037 NZ_CAJZAL010000122.1 Protein Homology CDS 33391 35514 . - 0 ID=cds-WP_034194437.1;Parent=gene-LDO38_RS09685;Dbxref=GenBank:WP_034194437.1;Name=WP_034194437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004547639.1;locus_tag=LDO38_RS09685;product=site-specific recombinase;protein_id=WP_034194437.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 36097 36840 . - . ID=gene-LDO38_RS09690;Name=LDO38_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09690;old_locus_tag=BVI2075_220038 NZ_CAJZAL010000122.1 Protein Homology CDS 36097 36840 . - 0 ID=cds-WP_011883307.1;Parent=gene-LDO38_RS09690;Dbxref=GenBank:WP_011883307.1;Name=WP_011883307.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401658.1;locus_tag=LDO38_RS09690;product=PqiC family protein;protein_id=WP_011883307.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 36837 38456 . - . ID=gene-LDO38_RS09695;Name=LDO38_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09695;old_locus_tag=BVI2075_220039 NZ_CAJZAL010000122.1 Protein Homology CDS 36837 38456 . - 0 ID=cds-WP_011883308.1;Parent=gene-LDO38_RS09695;Dbxref=GenBank:WP_011883308.1;Name=WP_011883308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883308.1;locus_tag=LDO38_RS09695;product=intermembrane transport protein PqiB;protein_id=WP_011883308.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 38449 39078 . - . ID=gene-LDO38_RS09700;Name=LDO38_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09700;old_locus_tag=BVI2075_220040 NZ_CAJZAL010000122.1 Protein Homology CDS 38449 39078 . - 0 ID=cds-WP_011883309.1;Parent=gene-LDO38_RS09700;Dbxref=GenBank:WP_011883309.1;Name=WP_011883309.1;Ontology_term=GO:0006950,GO:0061024,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=response to stress|0006950||IEA,membrane organization|0061024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883309.1;locus_tag=LDO38_RS09700;product=paraquat-inducible protein A;protein_id=WP_011883309.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 39075 39764 . - . ID=gene-LDO38_RS09705;Name=LDO38_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09705;old_locus_tag=BVI2075_220041 NZ_CAJZAL010000122.1 Protein Homology CDS 39075 39764 . - 0 ID=cds-WP_011883310.1;Parent=gene-LDO38_RS09705;Dbxref=GenBank:WP_011883310.1;Name=WP_011883310.1;Ontology_term=GO:0006950,GO:0061024,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=response to stress|0006950||IEA,membrane organization|0061024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327922.1;locus_tag=LDO38_RS09705;product=paraquat-inducible protein A;protein_id=WP_011883310.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 40023 40583 . + . ID=gene-LDO38_RS09710;Name=LDO38_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09710;old_locus_tag=BVI2075_220042 NZ_CAJZAL010000122.1 Protein Homology CDS 40023 40583 . + 0 ID=cds-WP_069246140.1;Parent=gene-LDO38_RS09710;Dbxref=GenBank:WP_069246140.1;Name=WP_069246140.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602248.1;locus_tag=LDO38_RS09710;product=cytochrome b;protein_id=WP_069246140.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 40592 41152 . + . ID=gene-LDO38_RS09715;Name=LDO38_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09715;old_locus_tag=BVI2075_220043 NZ_CAJZAL010000122.1 Protein Homology CDS 40592 41152 . + 0 ID=cds-WP_011883312.1;Parent=gene-LDO38_RS09715;Dbxref=GenBank:WP_011883312.1;Name=WP_011883312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106308.1;locus_tag=LDO38_RS09715;product=YceI family protein;protein_id=WP_011883312.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 41235 41813 . + . ID=gene-LDO38_RS09720;Name=LDO38_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09720;old_locus_tag=BVI2075_220044 NZ_CAJZAL010000122.1 Protein Homology CDS 41235 41813 . + 0 ID=cds-WP_045578524.1;Parent=gene-LDO38_RS09720;Dbxref=GenBank:WP_045578524.1;Name=WP_045578524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025318.1;locus_tag=LDO38_RS09720;product=YceI family protein;protein_id=WP_045578524.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 41803 41991 . - . ID=gene-LDO38_RS09725;Name=LDO38_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09725 NZ_CAJZAL010000122.1 GeneMarkS-2+ CDS 41803 41991 . - 0 ID=cds-WP_124260091.1;Parent=gene-LDO38_RS09725;Dbxref=GenBank:WP_124260091.1;Name=WP_124260091.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS09725;product=hypothetical protein;protein_id=WP_124260091.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 41978 43255 . + . ID=gene-LDO38_RS09730;Name=LDO38_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09730;old_locus_tag=BVI2075_220045 NZ_CAJZAL010000122.1 Protein Homology CDS 41978 43255 . + 0 ID=cds-WP_034194441.1;Parent=gene-LDO38_RS09730;Dbxref=GenBank:WP_034194441.1;Name=WP_034194441.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760287.1;locus_tag=LDO38_RS09730;product=MFS transporter;protein_id=WP_034194441.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 43263 44831 . - . ID=gene-LDO38_RS09735;Name=LDO38_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09735;old_locus_tag=BVI2075_220046 NZ_CAJZAL010000122.1 Protein Homology CDS 43263 44831 . - 0 ID=cds-WP_185499748.1;Parent=gene-LDO38_RS09735;Dbxref=GenBank:WP_185499748.1;Name=WP_185499748.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883315.1;locus_tag=LDO38_RS09735;product=S41 family peptidase;protein_id=WP_185499748.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 45041 45991 . - . ID=gene-LDO38_RS09740;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=LDO38_RS09740;old_locus_tag=BVI2075_220047 NZ_CAJZAL010000122.1 Protein Homology CDS 45041 45991 . - 0 ID=cds-WP_011883316.1;Parent=gene-LDO38_RS09740;Dbxref=GenBank:WP_011883316.1;Name=WP_011883316.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011852175.1;locus_tag=LDO38_RS09740;product=protein translocase subunit SecF;protein_id=WP_011883316.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 46010 48031 . - . ID=gene-LDO38_RS09745;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=LDO38_RS09745;old_locus_tag=BVI2075_220048 NZ_CAJZAL010000122.1 Protein Homology CDS 46010 48031 . - 0 ID=cds-WP_059474733.1;Parent=gene-LDO38_RS09745;Dbxref=GenBank:WP_059474733.1;Name=WP_059474733.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363128.1;locus_tag=LDO38_RS09745;product=protein translocase subunit SecD;protein_id=WP_059474733.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 48138 48461 . - . ID=gene-LDO38_RS09750;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=LDO38_RS09750;old_locus_tag=BVI2075_220049 NZ_CAJZAL010000122.1 Protein Homology CDS 48138 48461 . - 0 ID=cds-WP_011883318.1;Parent=gene-LDO38_RS09750;Dbxref=GenBank:WP_011883318.1;Name=WP_011883318.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014190436.1;locus_tag=LDO38_RS09750;product=preprotein translocase subunit YajC;protein_id=WP_011883318.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 48733 49926 . - . ID=gene-LDO38_RS09755;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=LDO38_RS09755;old_locus_tag=BVI2075_220052 NZ_CAJZAL010000122.1 Protein Homology CDS 48733 49926 . - 0 ID=cds-WP_034194442.1;Parent=gene-LDO38_RS09755;Dbxref=GenBank:WP_034194442.1;Name=WP_034194442.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363129.1;locus_tag=LDO38_RS09755;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_034194442.1;transl_table=11 NZ_CAJZAL010000122.1 RefSeq gene 50084 50561 . - . ID=gene-LDO38_RS09760;Name=LDO38_RS09760;end_range=50561,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09760;old_locus_tag=BVI2075_220053;partial=true NZ_CAJZAL010000122.1 Protein Homology CDS 50084 50561 . - 1 ID=cds-WP_224056351.1;Parent=gene-LDO38_RS09760;Dbxref=GenBank:WP_224056351.1;Name=WP_224056351.1;Ontology_term=GO:0016740,GO:0016853;end_range=50561,.;gbkey=CDS;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722469.1;locus_tag=LDO38_RS09760;partial=true;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_224056351.1;transl_table=11 ##sequence-region NZ_CAJZAL010000123.1 1 177084 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000123.1 RefSeq region 1 177084 . + . ID=NZ_CAJZAL010000123.1:1..177084;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_23 NZ_CAJZAL010000123.1 RefSeq gene 178 486 . - . ID=gene-LDO38_RS09765;Name=LDO38_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09765;old_locus_tag=BVI2075_230001 NZ_CAJZAL010000123.1 Protein Homology CDS 178 486 . - 0 ID=cds-WP_011884709.1;Parent=gene-LDO38_RS09765;Dbxref=GenBank:WP_011884709.1;Name=WP_011884709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884709.1;locus_tag=LDO38_RS09765;product=hypothetical protein;protein_id=WP_011884709.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 607 1350 . + . ID=gene-LDO38_RS09770;Name=LDO38_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09770;old_locus_tag=BVI2075_230002 NZ_CAJZAL010000123.1 Protein Homology CDS 607 1350 . + 0 ID=cds-WP_014722976.1;Parent=gene-LDO38_RS09770;Dbxref=GenBank:WP_014722976.1;Name=WP_014722976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757998.1;locus_tag=LDO38_RS09770;product=DUF695 domain-containing protein;protein_id=WP_014722976.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 1969 2433 . + . ID=gene-LDO38_RS09775;Name=LDO38_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09775;old_locus_tag=BVI2075_230003 NZ_CAJZAL010000123.1 Protein Homology CDS 1969 2433 . + 0 ID=cds-WP_011884706.1;Parent=gene-LDO38_RS09775;Dbxref=GenBank:WP_011884706.1;Name=WP_011884706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884706.1;locus_tag=LDO38_RS09775;product=plasmid fertility inhibition factor family protein;protein_id=WP_011884706.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 2512 3951 . - . ID=gene-LDO38_RS09780;Name=LDO38_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09780;old_locus_tag=BVI2075_230004 NZ_CAJZAL010000123.1 Protein Homology CDS 2512 3951 . - 0 ID=cds-WP_011884703.1;Parent=gene-LDO38_RS09780;Dbxref=GenBank:WP_011884703.1;Name=WP_011884703.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722974.1;locus_tag=LDO38_RS09780;product=PAS domain-containing sensor histidine kinase;protein_id=WP_011884703.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 4599 5327 . + . ID=gene-LDO38_RS09785;Name=LDO38_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09785;old_locus_tag=BVI2075_230006 NZ_CAJZAL010000123.1 Protein Homology CDS 4599 5327 . + 0 ID=cds-WP_045579472.1;Parent=gene-LDO38_RS09785;Dbxref=GenBank:WP_045579472.1;Name=WP_045579472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547634.1;locus_tag=LDO38_RS09785;product=lysozyme inhibitor LprI family protein;protein_id=WP_045579472.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 6101 6925 . + . ID=gene-LDO38_RS09790;Name=LDO38_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09790;old_locus_tag=BVI2075_230009 NZ_CAJZAL010000123.1 GeneMarkS-2+ CDS 6101 6925 . + 0 ID=cds-WP_224056352.1;Parent=gene-LDO38_RS09790;Dbxref=GenBank:WP_224056352.1;Name=WP_224056352.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS09790;product=toll/interleukin-1 receptor domain-containing protein;protein_id=WP_224056352.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 6957 7643 . - . ID=gene-LDO38_RS09795;Name=LDO38_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09795;old_locus_tag=BVI2075_230012 NZ_CAJZAL010000123.1 Protein Homology CDS 6957 7643 . - 0 ID=cds-WP_069246228.1;Parent=gene-LDO38_RS09795;Dbxref=GenBank:WP_069246228.1;Name=WP_069246228.1;Ontology_term=GO:0009432,GO:0003697,GO:0008233;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA,peptidase activity|0008233||IEA;go_process=SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009899897.1;locus_tag=LDO38_RS09795;product=SOS response-associated peptidase;protein_id=WP_069246228.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 7725 8051 . + . ID=gene-LDO38_RS09800;Name=LDO38_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09800;old_locus_tag=BVI2075_230011 NZ_CAJZAL010000123.1 GeneMarkS-2+ CDS 7725 8051 . + 0 ID=cds-WP_224056353.1;Parent=gene-LDO38_RS09800;Dbxref=GenBank:WP_224056353.1;Name=WP_224056353.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS09800;product=hypothetical protein;protein_id=WP_224056353.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 8021 8500 . - . ID=gene-LDO38_RS09805;Name=LDO38_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09805;old_locus_tag=BVI2075_230013 NZ_CAJZAL010000123.1 Protein Homology CDS 8021 8500 . - 0 ID=cds-WP_224056354.1;Parent=gene-LDO38_RS09805;Dbxref=GenBank:WP_224056354.1;Name=WP_224056354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009905951.1;locus_tag=LDO38_RS09805;product=DUF2514 family protein;protein_id=WP_224056354.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 8497 9045 . - . ID=gene-LDO38_RS09810;Name=LDO38_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09810;old_locus_tag=BVI2075_230014 NZ_CAJZAL010000123.1 Protein Homology CDS 8497 9045 . - 0 ID=cds-WP_224056355.1;Parent=gene-LDO38_RS09810;Dbxref=GenBank:WP_224056355.1;Name=WP_224056355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027827.1;locus_tag=LDO38_RS09810;product=hypothetical protein;protein_id=WP_224056355.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 9042 9539 . - . ID=gene-LDO38_RS09815;Name=LDO38_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09815;old_locus_tag=BVI2075_230015 NZ_CAJZAL010000123.1 Protein Homology CDS 9042 9539 . - 0 ID=cds-WP_224056356.1;Parent=gene-LDO38_RS09815;Dbxref=GenBank:WP_224056356.1;Name=WP_224056356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216728.1;locus_tag=LDO38_RS09815;product=lysozyme;protein_id=WP_224056356.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 9532 9714 . - . ID=gene-LDO38_RS09820;Name=LDO38_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09820;old_locus_tag=BVI2075_230016 NZ_CAJZAL010000123.1 Protein Homology CDS 9532 9714 . - 0 ID=cds-WP_071767391.1;Parent=gene-LDO38_RS09820;Dbxref=GenBank:WP_071767391.1;Name=WP_071767391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495243.1;locus_tag=LDO38_RS09820;product=hypothetical protein;protein_id=WP_071767391.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 9814 10986 . + . ID=gene-LDO38_RS09825;Name=LDO38_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09825;old_locus_tag=BVI2075_230017 NZ_CAJZAL010000123.1 Protein Homology CDS 9814 10986 . + 0 ID=cds-WP_224056357.1;Parent=gene-LDO38_RS09825;Dbxref=GenBank:WP_224056357.1;Name=WP_224056357.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF013884.7;locus_tag=LDO38_RS09825;product=acyltransferase family protein;protein_id=WP_224056357.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 11153 12439 . - . ID=gene-LDO38_RS09830;Name=LDO38_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09830;old_locus_tag=BVI2075_230019 NZ_CAJZAL010000123.1 Protein Homology CDS 11153 12439 . - 0 ID=cds-WP_224056358.1;Parent=gene-LDO38_RS09830;Dbxref=GenBank:WP_224056358.1;Name=WP_224056358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488881.1;locus_tag=LDO38_RS09830;product=hypothetical protein;protein_id=WP_224056358.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 12503 13165 . - . ID=gene-LDO38_RS09835;Name=LDO38_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09835;old_locus_tag=BVI2075_230020 NZ_CAJZAL010000123.1 Protein Homology CDS 12503 13165 . - 0 ID=cds-WP_224056416.1;Parent=gene-LDO38_RS09835;Dbxref=GenBank:WP_224056416.1;Name=WP_224056416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027832.1;locus_tag=LDO38_RS09835;product=DUF2612 domain-containing protein;protein_id=WP_224056416.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 13165 14346 . - . ID=gene-LDO38_RS09840;Name=LDO38_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09840;old_locus_tag=BVI2075_230021 NZ_CAJZAL010000123.1 Protein Homology CDS 13165 14346 . - 0 ID=cds-WP_224056359.1;Parent=gene-LDO38_RS09840;Dbxref=GenBank:WP_224056359.1;Name=WP_224056359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010111171.1;locus_tag=LDO38_RS09840;product=baseplate J/gp47 family protein;protein_id=WP_224056359.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 14343 14696 . - . ID=gene-LDO38_RS09845;Name=LDO38_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09845;old_locus_tag=BVI2075_230022 NZ_CAJZAL010000123.1 Protein Homology CDS 14343 14696 . - 0 ID=cds-WP_224056360.1;Parent=gene-LDO38_RS09845;Dbxref=GenBank:WP_224056360.1;Name=WP_224056360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010111173.1;locus_tag=LDO38_RS09845;product=hypothetical protein;protein_id=WP_224056360.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 14704 15453 . - . ID=gene-LDO38_RS09850;Name=LDO38_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09850;old_locus_tag=BVI2075_230024 NZ_CAJZAL010000123.1 Protein Homology CDS 14704 15453 . - 0 ID=cds-WP_224056361.1;Parent=gene-LDO38_RS09850;Dbxref=GenBank:WP_224056361.1;Name=WP_224056361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764388.1;locus_tag=LDO38_RS09850;product=Gp138 family membrane-puncturing spike protein;protein_id=WP_224056361.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 15457 15834 . + . ID=gene-LDO38_RS09855;Name=LDO38_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09855;old_locus_tag=BVI2075_230023 NZ_CAJZAL010000123.1 Protein Homology CDS 15457 15834 . + 0 ID=cds-WP_224056362.1;Parent=gene-LDO38_RS09855;Dbxref=GenBank:WP_224056362.1;Name=WP_224056362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764389.1;locus_tag=LDO38_RS09855;product=hypothetical protein;protein_id=WP_224056362.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 15831 16799 . - . ID=gene-LDO38_RS09860;Name=LDO38_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09860;old_locus_tag=BVI2075_230025 NZ_CAJZAL010000123.1 Protein Homology CDS 15831 16799 . - 0 ID=cds-WP_224056363.1;Parent=gene-LDO38_RS09860;Dbxref=GenBank:WP_224056363.1;Name=WP_224056363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027837.1;locus_tag=LDO38_RS09860;product=phage protein;protein_id=WP_224056363.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 16796 17113 . - . ID=gene-LDO38_RS09865;Name=LDO38_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09865;old_locus_tag=BVI2075_230026 NZ_CAJZAL010000123.1 Protein Homology CDS 16796 17113 . - 0 ID=cds-WP_224056364.1;Parent=gene-LDO38_RS09865;Dbxref=GenBank:WP_224056364.1;Name=WP_224056364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027838.1;locus_tag=LDO38_RS09865;product=phage baseplate plug family protein;protein_id=WP_224056364.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 17113 17670 . - . ID=gene-LDO38_RS09870;Name=LDO38_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09870;old_locus_tag=BVI2075_230027 NZ_CAJZAL010000123.1 Protein Homology CDS 17113 17670 . - 0 ID=cds-WP_435520932.1;Parent=gene-LDO38_RS09870;Dbxref=GenBank:WP_435520932.1;Name=WP_435520932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011298555.1;locus_tag=LDO38_RS09870;product=phage baseplate protein;protein_id=WP_435520932.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 17685 19679 . - . ID=gene-LDO38_RS09875;Name=LDO38_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09875;old_locus_tag=BVI2075_230028 NZ_CAJZAL010000123.1 Protein Homology CDS 17685 19679 . - 0 ID=cds-WP_224056366.1;Parent=gene-LDO38_RS09875;Dbxref=GenBank:WP_224056366.1;Name=WP_224056366.1;Ontology_term=GO:0004040;gbkey=CDS;go_function=amidase activity|0004040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213511.1;locus_tag=LDO38_RS09875;product=glucosaminidase domain-containing protein;protein_id=WP_224056366.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 19672 19803 . - . ID=gene-LDO38_RS30505;Name=LDO38_RS30505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30505 NZ_CAJZAL010000123.1 Protein Homology CDS 19672 19803 . - 0 ID=cds-WP_279614105.1;Parent=gene-LDO38_RS30505;Dbxref=GenBank:WP_279614105.1;Name=WP_279614105.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF047033.2;locus_tag=LDO38_RS30505;product=DUF6889 family protein;protein_id=WP_279614105.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 19863 20414 . - . ID=gene-LDO38_RS09880;Name=LDO38_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09880;old_locus_tag=BVI2075_230030 NZ_CAJZAL010000123.1 Protein Homology CDS 19863 20414 . - 0 ID=cds-WP_224056367.1;Parent=gene-LDO38_RS09880;Dbxref=GenBank:WP_224056367.1;Name=WP_224056367.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010111197.1;locus_tag=LDO38_RS09880;product=phage tail assembly chaperone;protein_id=WP_224056367.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 20417 20857 . - . ID=gene-LDO38_RS09885;Name=LDO38_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09885;old_locus_tag=BVI2075_230031 NZ_CAJZAL010000123.1 Protein Homology CDS 20417 20857 . - 0 ID=cds-WP_131753685.1;Parent=gene-LDO38_RS09885;Dbxref=GenBank:WP_131753685.1;Name=WP_131753685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764395.1;locus_tag=LDO38_RS09885;product=phage structural protein;protein_id=WP_131753685.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 20872 22347 . - . ID=gene-LDO38_RS09890;Name=LDO38_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09890;old_locus_tag=BVI2075_230032 NZ_CAJZAL010000123.1 Protein Homology CDS 20872 22347 . - 0 ID=cds-WP_224056368.1;Parent=gene-LDO38_RS09890;Dbxref=GenBank:WP_224056368.1;Name=WP_224056368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010111202.1;locus_tag=LDO38_RS09890;product=DUF3383 domain-containing protein;protein_id=WP_224056368.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 22357 22947 . - . ID=gene-LDO38_RS09895;Name=LDO38_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09895;old_locus_tag=BVI2075_230033 NZ_CAJZAL010000123.1 Protein Homology CDS 22357 22947 . - 0 ID=cds-WP_224056369.1;Parent=gene-LDO38_RS09895;Dbxref=GenBank:WP_224056369.1;Name=WP_224056369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213515.1;locus_tag=LDO38_RS09895;product=phage neck terminator protein;protein_id=WP_224056369.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 22952 23323 . - . ID=gene-LDO38_RS09900;Name=LDO38_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09900;old_locus_tag=BVI2075_230034 NZ_CAJZAL010000123.1 Protein Homology CDS 22952 23323 . - 0 ID=cds-WP_224056370.1;Parent=gene-LDO38_RS09900;Dbxref=GenBank:WP_224056370.1;Name=WP_224056370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213516.1;locus_tag=LDO38_RS09900;product=hypothetical protein;protein_id=WP_224056370.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 23385 23867 . - . ID=gene-LDO38_RS09905;Name=LDO38_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09905;old_locus_tag=BVI2075_230035 NZ_CAJZAL010000123.1 Protein Homology CDS 23385 23867 . - 0 ID=cds-WP_224056371.1;Parent=gene-LDO38_RS09905;Dbxref=GenBank:WP_224056371.1;Name=WP_224056371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213517.1;locus_tag=LDO38_RS09905;product=hypothetical protein;protein_id=WP_224056371.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 23896 24279 . - . ID=gene-LDO38_RS09910;Name=LDO38_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09910;old_locus_tag=BVI2075_230036 NZ_CAJZAL010000123.1 Protein Homology CDS 23896 24279 . - 0 ID=cds-WP_224056372.1;Parent=gene-LDO38_RS09910;Dbxref=GenBank:WP_224056372.1;Name=WP_224056372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009917276.1;locus_tag=LDO38_RS09910;product=DUF4054 domain-containing protein;protein_id=WP_224056372.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 24343 24810 . - . ID=gene-LDO38_RS09915;Name=LDO38_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09915;old_locus_tag=BVI2075_230037 NZ_CAJZAL010000123.1 Protein Homology CDS 24343 24810 . - 0 ID=cds-WP_435520933.1;Parent=gene-LDO38_RS09915;Dbxref=GenBank:WP_435520933.1;Name=WP_435520933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881830.1;locus_tag=LDO38_RS09915;product=STY1053 family phage-associated protein;protein_id=WP_435520933.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 24821 25912 . - . ID=gene-LDO38_RS09920;Name=LDO38_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09920;old_locus_tag=BVI2075_230038 NZ_CAJZAL010000123.1 Protein Homology CDS 24821 25912 . - 0 ID=cds-WP_043292153.1;Parent=gene-LDO38_RS09920;Dbxref=GenBank:WP_043292153.1;Name=WP_043292153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764401.1;locus_tag=LDO38_RS09920;product=DUF2184 domain-containing protein;protein_id=WP_043292153.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 25982 26488 . - . ID=gene-LDO38_RS09925;Name=LDO38_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09925;old_locus_tag=BVI2075_230039 NZ_CAJZAL010000123.1 Protein Homology CDS 25982 26488 . - 0 ID=cds-WP_059584227.1;Parent=gene-LDO38_RS09925;Dbxref=GenBank:WP_059584227.1;Name=WP_059584227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009917274.1;locus_tag=LDO38_RS09925;product=structural cement protein Gp24;protein_id=WP_059584227.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 26498 27955 . - . ID=gene-LDO38_RS09930;Name=LDO38_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09930;old_locus_tag=BVI2075_230040 NZ_CAJZAL010000123.1 Protein Homology CDS 26498 27955 . - 0 ID=cds-WP_224056374.1;Parent=gene-LDO38_RS09930;Dbxref=GenBank:WP_224056374.1;Name=WP_224056374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027851.1;locus_tag=LDO38_RS09930;product=DUF2213 domain-containing protein;protein_id=WP_224056374.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 28127 28420 . - . ID=gene-LDO38_RS09935;Name=LDO38_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09935 NZ_CAJZAL010000123.1 Protein Homology CDS 28127 28420 . - 0 ID=cds-WP_224056375.1;Parent=gene-LDO38_RS09935;Dbxref=GenBank:WP_224056375.1;Name=WP_224056375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011298542.1;locus_tag=LDO38_RS09935;product=DUF6527 family protein;protein_id=WP_224056375.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 28422 29177 . - . ID=gene-LDO38_RS09940;Name=LDO38_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09940;old_locus_tag=BVI2075_230041 NZ_CAJZAL010000123.1 Protein Homology CDS 28422 29177 . - 0 ID=cds-WP_224056376.1;Parent=gene-LDO38_RS09940;Dbxref=GenBank:WP_224056376.1;Name=WP_224056376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881826.1;locus_tag=LDO38_RS09940;product=phage head morphogenesis protein;protein_id=WP_224056376.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 29174 30640 . - . ID=gene-LDO38_RS09945;Name=LDO38_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09945;old_locus_tag=BVI2075_230042 NZ_CAJZAL010000123.1 Protein Homology CDS 29174 30640 . - 0 ID=cds-WP_176025692.1;Parent=gene-LDO38_RS09945;Dbxref=GenBank:WP_176025692.1;Name=WP_176025692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881825.1;locus_tag=LDO38_RS09945;product=DUF1073 domain-containing protein;protein_id=WP_176025692.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 30661 32214 . - . ID=gene-LDO38_RS09950;Name=terL;gbkey=Gene;gene=terL;gene_biotype=protein_coding;locus_tag=LDO38_RS09950;old_locus_tag=BVI2075_230043 NZ_CAJZAL010000123.1 Protein Homology CDS 30661 32214 . - 0 ID=cds-WP_224056377.1;Parent=gene-LDO38_RS09950;Dbxref=GenBank:WP_224056377.1;Name=WP_224056377.1;gbkey=CDS;gene=terL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009917273.1;locus_tag=LDO38_RS09950;product=phage terminase large subunit;protein_id=WP_224056377.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 32165 32644 . - . ID=gene-LDO38_RS09955;Name=LDO38_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09955;old_locus_tag=BVI2075_230044 NZ_CAJZAL010000123.1 Protein Homology CDS 32165 32644 . - 0 ID=cds-WP_224056378.1;Parent=gene-LDO38_RS09955;Dbxref=GenBank:WP_224056378.1;Name=WP_224056378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027856.1;locus_tag=LDO38_RS09955;product=DUF2280 domain-containing protein;protein_id=WP_224056378.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 32663 33328 . - . ID=gene-LDO38_RS09960;Name=LDO38_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09960;old_locus_tag=BVI2075_230045 NZ_CAJZAL010000123.1 Protein Homology CDS 32663 33328 . - 0 ID=cds-WP_224056379.1;Parent=gene-LDO38_RS09960;Dbxref=GenBank:WP_224056379.1;Name=WP_224056379.1;Ontology_term=GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027857.1;locus_tag=LDO38_RS09960;product=putative metallopeptidase;protein_id=WP_224056379.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 33465 33812 . + . ID=gene-LDO38_RS09965;Name=LDO38_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09965;old_locus_tag=BVI2075_230046 NZ_CAJZAL010000123.1 Protein Homology CDS 33465 33812 . + 0 ID=cds-WP_224056380.1;Parent=gene-LDO38_RS09965;Dbxref=GenBank:WP_224056380.1;Name=WP_224056380.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039367.5;locus_tag=LDO38_RS09965;product=DUF6173 family protein;protein_id=WP_224056380.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 34093 34752 . - . ID=gene-LDO38_RS09970;Name=LDO38_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09970;old_locus_tag=BVI2075_230047 NZ_CAJZAL010000123.1 GeneMarkS-2+ CDS 34093 34752 . - 0 ID=cds-WP_224056381.1;Parent=gene-LDO38_RS09970;Dbxref=GenBank:WP_224056381.1;Name=WP_224056381.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS09970;product=hypothetical protein;protein_id=WP_224056381.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 34749 35075 . - . ID=gene-LDO38_RS09975;Name=LDO38_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09975;old_locus_tag=BVI2075_230048 NZ_CAJZAL010000123.1 Protein Homology CDS 34749 35075 . - 0 ID=cds-WP_224056382.1;Parent=gene-LDO38_RS09975;Dbxref=GenBank:WP_224056382.1;Name=WP_224056382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875583.1;locus_tag=LDO38_RS09975;product=hypothetical protein;protein_id=WP_224056382.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 35087 35557 . - . ID=gene-LDO38_RS09980;Name=LDO38_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09980;old_locus_tag=BVI2075_230049 NZ_CAJZAL010000123.1 Protein Homology CDS 35087 35557 . - 0 ID=cds-WP_224056383.1;Parent=gene-LDO38_RS09980;Dbxref=GenBank:WP_224056383.1;Name=WP_224056383.1;Ontology_term=GO:0006281,GO:0006310,GO:0000287,GO:0000400,GO:0008821;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,four-way junction DNA binding|0000400||IEA,crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875582.1;locus_tag=LDO38_RS09980;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_224056383.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 35554 35730 . - . ID=gene-LDO38_RS09985;Name=LDO38_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09985;old_locus_tag=BVI2075_230050 NZ_CAJZAL010000123.1 Protein Homology CDS 35554 35730 . - 0 ID=cds-WP_196482155.1;Parent=gene-LDO38_RS09985;Dbxref=GenBank:WP_196482155.1;Name=WP_196482155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027862.1;locus_tag=LDO38_RS09985;product=hypothetical protein;protein_id=WP_196482155.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 35724 35900 . - . ID=gene-LDO38_RS09990;Name=LDO38_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09990;old_locus_tag=BVI2075_230051 NZ_CAJZAL010000123.1 GeneMarkS-2+ CDS 35724 35900 . - 0 ID=cds-WP_224056384.1;Parent=gene-LDO38_RS09990;Dbxref=GenBank:WP_224056384.1;Name=WP_224056384.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS09990;product=hypothetical protein;protein_id=WP_224056384.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 35897 36157 . - . ID=gene-LDO38_RS09995;Name=LDO38_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS09995;old_locus_tag=BVI2075_230052 NZ_CAJZAL010000123.1 Protein Homology CDS 35897 36157 . - 0 ID=cds-WP_224056385.1;Parent=gene-LDO38_RS09995;Dbxref=GenBank:WP_224056385.1;Name=WP_224056385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027863.1;locus_tag=LDO38_RS09995;product=hypothetical protein;protein_id=WP_224056385.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 36154 37257 . - . ID=gene-LDO38_RS10000;Name=LDO38_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10000;old_locus_tag=BVI2075_230053 NZ_CAJZAL010000123.1 Protein Homology CDS 36154 37257 . - 0 ID=cds-WP_224056386.1;Parent=gene-LDO38_RS10000;Dbxref=GenBank:WP_224056386.1;Name=WP_224056386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010108101.1;locus_tag=LDO38_RS10000;product=DUF1376 domain-containing protein;protein_id=WP_224056386.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 37254 38228 . - . ID=gene-LDO38_RS10005;Name=LDO38_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10005;old_locus_tag=BVI2075_230054 NZ_CAJZAL010000123.1 Protein Homology CDS 37254 38228 . - 0 ID=cds-WP_224056387.1;Parent=gene-LDO38_RS10005;Dbxref=GenBank:WP_224056387.1;Name=WP_224056387.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009901176.1;locus_tag=LDO38_RS10005;product=phosphoadenosine phosphosulfate reductase family protein;protein_id=WP_224056387.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 38225 39232 . - . ID=gene-LDO38_RS10010;Name=LDO38_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10010;old_locus_tag=BVI2075_230055 NZ_CAJZAL010000123.1 Protein Homology CDS 38225 39232 . - 0 ID=cds-WP_224056388.1;Parent=gene-LDO38_RS10010;Dbxref=GenBank:WP_224056388.1;Name=WP_224056388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526647.1;locus_tag=LDO38_RS10010;product=DNA-methyltransferase;protein_id=WP_224056388.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 39229 40098 . - . ID=gene-LDO38_RS10015;Name=LDO38_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10015;old_locus_tag=BVI2075_230056 NZ_CAJZAL010000123.1 Protein Homology CDS 39229 40098 . - 0 ID=cds-WP_224056389.1;Parent=gene-LDO38_RS10015;Dbxref=GenBank:WP_224056389.1;Name=WP_224056389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009916892.1;locus_tag=LDO38_RS10015;product=hypothetical protein;protein_id=WP_224056389.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 40095 40397 . - . ID=gene-LDO38_RS10020;Name=LDO38_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10020;old_locus_tag=BVI2075_230057 NZ_CAJZAL010000123.1 GeneMarkS-2+ CDS 40095 40397 . - 0 ID=cds-WP_224056390.1;Parent=gene-LDO38_RS10020;Dbxref=GenBank:WP_224056390.1;Name=WP_224056390.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS10020;product=hypothetical protein;protein_id=WP_224056390.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 40394 40621 . - . ID=gene-LDO38_RS10025;Name=LDO38_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10025;old_locus_tag=BVI2075_230058 NZ_CAJZAL010000123.1 GeneMarkS-2+ CDS 40394 40621 . - 0 ID=cds-WP_224056391.1;Parent=gene-LDO38_RS10025;Dbxref=GenBank:WP_224056391.1;Name=WP_224056391.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS10025;product=hypothetical protein;protein_id=WP_224056391.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 40615 40836 . - . ID=gene-LDO38_RS10030;Name=LDO38_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10030;old_locus_tag=BVI2075_230059 NZ_CAJZAL010000123.1 Protein Homology CDS 40615 40836 . - 0 ID=cds-WP_224056392.1;Parent=gene-LDO38_RS10030;Dbxref=GenBank:WP_224056392.1;Name=WP_224056392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027870.1;locus_tag=LDO38_RS10030;product=hypothetical protein;protein_id=WP_224056392.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 40833 41207 . - . ID=gene-LDO38_RS10035;Name=LDO38_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10035;old_locus_tag=BVI2075_230060 NZ_CAJZAL010000123.1 Protein Homology CDS 40833 41207 . - 0 ID=cds-WP_124503284.1;Parent=gene-LDO38_RS10035;Dbxref=GenBank:WP_124503284.1;Name=WP_124503284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213534.1;locus_tag=LDO38_RS10035;product=hypothetical protein;protein_id=WP_124503284.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 41584 42054 . + . ID=gene-LDO38_RS10040;Name=LDO38_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10040;old_locus_tag=BVI2075_230062 NZ_CAJZAL010000123.1 Protein Homology CDS 41584 42054 . + 0 ID=cds-WP_230946050.1;Parent=gene-LDO38_RS10040;Dbxref=GenBank:WP_230946050.1;Name=WP_230946050.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407495.1;locus_tag=LDO38_RS10040;product=helix-turn-helix domain-containing protein;protein_id=WP_230946050.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 42880 43296 . + . ID=gene-LDO38_RS10045;Name=LDO38_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10045;old_locus_tag=BVI2075_230065 NZ_CAJZAL010000123.1 Protein Homology CDS 42880 43296 . + 0 ID=cds-WP_224056417.1;Parent=gene-LDO38_RS10045;Dbxref=GenBank:WP_224056417.1;Name=WP_224056417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407499.1;locus_tag=LDO38_RS10045;product=hypothetical protein;protein_id=WP_224056417.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 43345 43566 . + . ID=gene-LDO38_RS10050;Name=LDO38_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10050;old_locus_tag=BVI2075_230066 NZ_CAJZAL010000123.1 Protein Homology CDS 43345 43566 . + 0 ID=cds-WP_175657926.1;Parent=gene-LDO38_RS10050;Dbxref=GenBank:WP_175657926.1;Name=WP_175657926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853577.1;locus_tag=LDO38_RS10050;product=hypothetical protein;protein_id=WP_175657926.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 43568 43918 . + . ID=gene-LDO38_RS10055;Name=LDO38_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10055;old_locus_tag=BVI2075_230067 NZ_CAJZAL010000123.1 Protein Homology CDS 43568 43918 . + 0 ID=cds-WP_224056393.1;Parent=gene-LDO38_RS10055;Dbxref=GenBank:WP_224056393.1;Name=WP_224056393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027877.1;locus_tag=LDO38_RS10055;product=hypothetical protein;protein_id=WP_224056393.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 43915 44160 . + . ID=gene-LDO38_RS10060;Name=LDO38_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10060;old_locus_tag=BVI2075_230068 NZ_CAJZAL010000123.1 Protein Homology CDS 43915 44160 . + 0 ID=cds-WP_059476039.1;Parent=gene-LDO38_RS10060;Dbxref=GenBank:WP_059476039.1;Name=WP_059476039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009916882.1;locus_tag=LDO38_RS10060;product=hypothetical protein;protein_id=WP_059476039.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 44160 44336 . + . ID=gene-LDO38_RS10065;Name=LDO38_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10065;old_locus_tag=BVI2075_230069 NZ_CAJZAL010000123.1 Protein Homology CDS 44160 44336 . + 0 ID=cds-WP_175992643.1;Parent=gene-LDO38_RS10065;Dbxref=GenBank:WP_175992643.1;Name=WP_175992643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009977928.1;locus_tag=LDO38_RS10065;product=hypothetical protein;protein_id=WP_175992643.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 44333 44482 . + . ID=gene-LDO38_RS10070;Name=LDO38_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10070 NZ_CAJZAL010000123.1 Protein Homology CDS 44333 44482 . + 0 ID=cds-WP_224056394.1;Parent=gene-LDO38_RS10070;Dbxref=GenBank:WP_224056394.1;Name=WP_224056394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009977930.1;locus_tag=LDO38_RS10070;product=hypothetical protein;protein_id=WP_224056394.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 44479 44622 . + . ID=gene-LDO38_RS10075;Name=LDO38_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10075;old_locus_tag=BVI2075_230070 NZ_CAJZAL010000123.1 Protein Homology CDS 44479 44622 . + 0 ID=cds-WP_224056395.1;Parent=gene-LDO38_RS10075;Dbxref=GenBank:WP_224056395.1;Name=WP_224056395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027883.1;locus_tag=LDO38_RS10075;product=hypothetical protein;protein_id=WP_224056395.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 44718 45017 . + . ID=gene-LDO38_RS10080;Name=LDO38_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10080;old_locus_tag=BVI2075_230071 NZ_CAJZAL010000123.1 Protein Homology CDS 44718 45017 . + 0 ID=cds-WP_175992644.1;Parent=gene-LDO38_RS10080;Dbxref=GenBank:WP_175992644.1;Name=WP_175992644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027884.1;locus_tag=LDO38_RS10080;product=KTSC domain-containing protein;protein_id=WP_175992644.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 45014 45481 . + . ID=gene-LDO38_RS10085;Name=LDO38_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10085;old_locus_tag=BVI2075_230072 NZ_CAJZAL010000123.1 Protein Homology CDS 45014 45481 . + 0 ID=cds-WP_175992645.1;Parent=gene-LDO38_RS10085;Dbxref=GenBank:WP_175992645.1;Name=WP_175992645.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: protein motif:HMM:NF024784.6;locus_tag=LDO38_RS10085;product=HNH endonuclease signature motif containing protein;protein_id=WP_175992645.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 45478 46290 . + . ID=gene-LDO38_RS10090;Name=LDO38_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10090;old_locus_tag=BVI2075_230073 NZ_CAJZAL010000123.1 Protein Homology CDS 45478 46290 . + 0 ID=cds-WP_224056396.1;Parent=gene-LDO38_RS10090;Dbxref=GenBank:WP_224056396.1;Name=WP_224056396.1;Ontology_term=GO:0003677,GO:0003678,GO:0004518,GO:0005524,GO:0008854,GO:0009338;gbkey=CDS;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,nuclease activity|0004518||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424319.1;locus_tag=LDO38_RS10090;product=RecB family exonuclease;protein_id=WP_224056396.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 46301 47581 . + . ID=gene-LDO38_RS10095;Name=LDO38_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10095;old_locus_tag=BVI2075_230074 NZ_CAJZAL010000123.1 Protein Homology CDS 46301 47581 . + 0 ID=cds-WP_224056397.1;Parent=gene-LDO38_RS10095;Dbxref=GenBank:WP_224056397.1;Name=WP_224056397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009916879.1;locus_tag=LDO38_RS10095;product=hypothetical protein;protein_id=WP_224056397.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 47612 48493 . + . ID=gene-LDO38_RS10100;Name=LDO38_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10100;old_locus_tag=BVI2075_230075 NZ_CAJZAL010000123.1 Protein Homology CDS 47612 48493 . + 0 ID=cds-WP_224056398.1;Parent=gene-LDO38_RS10100;Dbxref=GenBank:WP_224056398.1;Name=WP_224056398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009916878.1;locus_tag=LDO38_RS10100;product=DNA translocase FtsK;protein_id=WP_224056398.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 48490 50256 . + . ID=gene-LDO38_RS10105;Name=LDO38_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10105;old_locus_tag=BVI2075_230076 NZ_CAJZAL010000123.1 Protein Homology CDS 48490 50256 . + 0 ID=cds-WP_224056399.1;Parent=gene-LDO38_RS10105;Dbxref=GenBank:WP_224056399.1;Name=WP_224056399.1;Ontology_term=GO:0006302,GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;go_process=double-strand break repair|0006302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027888.1;locus_tag=LDO38_RS10105;product=AAA family ATPase;protein_id=WP_224056399.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 50253 50876 . + . ID=gene-LDO38_RS10110;Name=LDO38_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10110;old_locus_tag=BVI2075_230077 NZ_CAJZAL010000123.1 Protein Homology CDS 50253 50876 . + 0 ID=cds-WP_224056400.1;Parent=gene-LDO38_RS10110;Dbxref=GenBank:WP_224056400.1;Name=WP_224056400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027889.1;locus_tag=LDO38_RS10110;product=1-pyrroline-5-carboxylate dehydrogenase;protein_id=WP_224056400.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 50911 51975 . + . ID=gene-LDO38_RS10115;Name=LDO38_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10115;old_locus_tag=BVI2075_230078 NZ_CAJZAL010000123.1 Protein Homology CDS 50911 51975 . + 0 ID=cds-WP_224056401.1;Parent=gene-LDO38_RS10115;Dbxref=GenBank:WP_224056401.1;Name=WP_224056401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424010.1;locus_tag=LDO38_RS10115;product=hypothetical protein;protein_id=WP_224056401.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 51982 52428 . + . ID=gene-LDO38_RS10120;Name=LDO38_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10120;old_locus_tag=BVI2075_230079 NZ_CAJZAL010000123.1 Protein Homology CDS 51982 52428 . + 0 ID=cds-WP_224056402.1;Parent=gene-LDO38_RS10120;Dbxref=GenBank:WP_224056402.1;Name=WP_224056402.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023101.6;locus_tag=LDO38_RS10120;product=zinc-finger-containing protein;protein_id=WP_224056402.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 52425 52679 . + . ID=gene-LDO38_RS10125;Name=LDO38_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10125;old_locus_tag=BVI2075_230080 NZ_CAJZAL010000123.1 GeneMarkS-2+ CDS 52425 52679 . + 0 ID=cds-WP_224056403.1;Parent=gene-LDO38_RS10125;Dbxref=GenBank:WP_224056403.1;Name=WP_224056403.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS10125;product=hypothetical protein;protein_id=WP_224056403.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 52676 53356 . - . ID=gene-LDO38_RS10130;Name=LDO38_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10130 NZ_CAJZAL010000123.1 GeneMarkS-2+ CDS 52676 53356 . - 0 ID=cds-WP_224056404.1;Parent=gene-LDO38_RS10130;Dbxref=GenBank:WP_224056404.1;Name=WP_224056404.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS10130;product=hypothetical protein;protein_id=WP_224056404.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 53526 53861 . - . ID=gene-LDO38_RS10135;Name=LDO38_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10135;old_locus_tag=BVI2075_230083 NZ_CAJZAL010000123.1 GeneMarkS-2+ CDS 53526 53861 . - 0 ID=cds-WP_224056405.1;Parent=gene-LDO38_RS10135;Dbxref=GenBank:WP_224056405.1;Name=WP_224056405.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS10135;product=hypothetical protein;protein_id=WP_224056405.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 54025 55932 . + . ID=gene-LDO38_RS10140;Name=LDO38_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10140;old_locus_tag=BVI2075_230084 NZ_CAJZAL010000123.1 Protein Homology CDS 54025 55932 . + 0 ID=cds-WP_224056406.1;Parent=gene-LDO38_RS10140;Dbxref=GenBank:WP_224056406.1;Name=WP_224056406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876065.1;locus_tag=LDO38_RS10140;product=DNA cytosine methyltransferase;protein_id=WP_224056406.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 56491 56760 . + . ID=gene-LDO38_RS10145;Name=LDO38_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10145;old_locus_tag=BVI2075_230085 NZ_CAJZAL010000123.1 GeneMarkS-2+ CDS 56491 56760 . + 0 ID=cds-WP_224056407.1;Parent=gene-LDO38_RS10145;Dbxref=GenBank:WP_224056407.1;Name=WP_224056407.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS10145;product=hypothetical protein;protein_id=WP_224056407.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq pseudogene 57115 57321 . - . ID=gene-LDO38_RS10150;Name=LDO38_RS10150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS10150;old_locus_tag=BVI2075_230087;partial=true;pseudo=true;start_range=.,57115 NZ_CAJZAL010000123.1 Protein Homology CDS 57115 57321 . - 0 ID=cds-LDO38_RS10150;Parent=gene-LDO38_RS10150;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547465.1;locus_tag=LDO38_RS10150;partial=true;product=hypothetical protein;pseudo=true;start_range=.,57115;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 57322 57594 . - . ID=gene-LDO38_RS10155;Name=LDO38_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10155;old_locus_tag=BVI2075_230088 NZ_CAJZAL010000123.1 Protein Homology CDS 57322 57594 . - 0 ID=cds-WP_224056408.1;Parent=gene-LDO38_RS10155;Dbxref=GenBank:WP_224056408.1;Name=WP_224056408.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019016.6;locus_tag=LDO38_RS10155;product=DUF1488 family protein;protein_id=WP_224056408.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 57606 57791 . - . ID=gene-LDO38_RS10160;Name=LDO38_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10160;old_locus_tag=BVI2075_230090 NZ_CAJZAL010000123.1 GeneMarkS-2+ CDS 57606 57791 . - 0 ID=cds-WP_034201661.1;Parent=gene-LDO38_RS10160;Dbxref=GenBank:WP_034201661.1;Name=WP_034201661.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS10160;product=hypothetical protein;protein_id=WP_034201661.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 57828 58388 . + . ID=gene-LDO38_RS10165;Name=LDO38_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10165;old_locus_tag=BVI2075_230089 NZ_CAJZAL010000123.1 GeneMarkS-2+ CDS 57828 58388 . + 0 ID=cds-WP_224056409.1;Parent=gene-LDO38_RS10165;Dbxref=GenBank:WP_224056409.1;Name=WP_224056409.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS10165;product=hypothetical protein;protein_id=WP_224056409.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 58385 59440 . + . ID=gene-LDO38_RS10170;Name=LDO38_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10170;old_locus_tag=BVI2075_230091 NZ_CAJZAL010000123.1 Protein Homology CDS 58385 59440 . + 0 ID=cds-WP_224056410.1;Parent=gene-LDO38_RS10170;Dbxref=GenBank:WP_224056410.1;Name=WP_224056410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010110035.1;locus_tag=LDO38_RS10170;product=phage Gp37/Gp68 family protein;protein_id=WP_224056410.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 59437 59634 . + . ID=gene-LDO38_RS10175;Name=LDO38_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10175;old_locus_tag=BVI2075_230092 NZ_CAJZAL010000123.1 GeneMarkS-2+ CDS 59437 59634 . + 0 ID=cds-WP_069264236.1;Parent=gene-LDO38_RS10175;Dbxref=GenBank:WP_069264236.1;Name=WP_069264236.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS10175;product=hypothetical protein;protein_id=WP_069264236.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 59631 60272 . + . ID=gene-LDO38_RS10180;Name=LDO38_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10180;old_locus_tag=BVI2075_230093 NZ_CAJZAL010000123.1 Protein Homology CDS 59631 60272 . + 0 ID=cds-WP_224056411.1;Parent=gene-LDO38_RS10180;Dbxref=GenBank:WP_224056411.1;Name=WP_224056411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764432.1;locus_tag=LDO38_RS10180;product=hypothetical protein;protein_id=WP_224056411.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 60269 60508 . + . ID=gene-LDO38_RS10185;Name=LDO38_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10185;old_locus_tag=BVI2075_230094 NZ_CAJZAL010000123.1 Protein Homology CDS 60269 60508 . + 0 ID=cds-WP_060965999.1;Parent=gene-LDO38_RS10185;Dbxref=GenBank:WP_060965999.1;Name=WP_060965999.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025352.6;locus_tag=LDO38_RS10185;product=DUF4224 domain-containing protein;protein_id=WP_060965999.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 60511 61632 . + . ID=gene-LDO38_RS10190;Name=LDO38_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10190;old_locus_tag=BVI2075_230095 NZ_CAJZAL010000123.1 GeneMarkS-2+ CDS 60511 61632 . + 0 ID=cds-WP_224056412.1;Parent=gene-LDO38_RS10190;Dbxref=GenBank:WP_224056412.1;Name=WP_224056412.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS10190;product=hypothetical protein;protein_id=WP_224056412.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 61655 62332 . - . ID=gene-LDO38_RS10195;Name=LDO38_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10195 NZ_CAJZAL010000123.1 GeneMarkS-2+ CDS 61655 62332 . - 0 ID=cds-WP_224056413.1;Parent=gene-LDO38_RS10195;Dbxref=GenBank:WP_224056413.1;Name=WP_224056413.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS10195;product=hypothetical protein;protein_id=WP_224056413.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 62474 62549 . - . ID=gene-LDO38_RS10200;Name=LDO38_RS10200;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS10200;old_locus_tag=BVI2075_TRNA40 NZ_CAJZAL010000123.1 tRNAscan-SE tRNA 62474 62549 . - . ID=rna-LDO38_RS10200;Parent=gene-LDO38_RS10200;anticodon=(pos:complement(62514..62516));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS10200;product=tRNA-His NZ_CAJZAL010000123.1 tRNAscan-SE exon 62474 62549 . - . ID=exon-LDO38_RS10200-1;Parent=rna-LDO38_RS10200;anticodon=(pos:complement(62514..62516));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS10200;product=tRNA-His NZ_CAJZAL010000123.1 RefSeq gene 62609 63595 . - . ID=gene-LDO38_RS10205;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=LDO38_RS10205;old_locus_tag=BVI2075_230098 NZ_CAJZAL010000123.1 Protein Homology CDS 62609 63595 . - 0 ID=cds-WP_014722972.1;Parent=gene-LDO38_RS10205;Dbxref=GenBank:WP_014722972.1;Name=WP_014722972.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491499.1;locus_tag=LDO38_RS10205;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_014722972.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 63732 63986 . - . ID=gene-LDO38_RS10210;Name=LDO38_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10210;old_locus_tag=BVI2075_230099 NZ_CAJZAL010000123.1 Protein Homology CDS 63732 63986 . - 0 ID=cds-WP_124259875.1;Parent=gene-LDO38_RS10210;Dbxref=GenBank:WP_124259875.1;Name=WP_124259875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884697.1;locus_tag=LDO38_RS10210;product=hypothetical protein;protein_id=WP_124259875.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 64042 64239 . - . ID=gene-LDO38_RS10215;Name=LDO38_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10215;old_locus_tag=BVI2075_230100 NZ_CAJZAL010000123.1 Protein Homology CDS 64042 64239 . - 0 ID=cds-WP_011884695.1;Parent=gene-LDO38_RS10215;Dbxref=GenBank:WP_011884695.1;Name=WP_011884695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751018.1;locus_tag=LDO38_RS10215;product=hypothetical protein;protein_id=WP_011884695.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 64383 64598 . - . ID=gene-LDO38_RS10220;Name=LDO38_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10220;old_locus_tag=BVI2075_230101 NZ_CAJZAL010000123.1 Protein Homology CDS 64383 64598 . - 0 ID=cds-WP_006400187.1;Parent=gene-LDO38_RS10220;Dbxref=GenBank:WP_006400187.1;Name=WP_006400187.1;Ontology_term=GO:0015689;gbkey=CDS;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007588023.1;locus_tag=LDO38_RS10220;product=TOBE domain-containing protein;protein_id=WP_006400187.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 64654 65619 . - . ID=gene-LDO38_RS10225;Name=LDO38_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10225;old_locus_tag=BVI2075_230102 NZ_CAJZAL010000123.1 Protein Homology CDS 64654 65619 . - 0 ID=cds-WP_059895626.1;Parent=gene-LDO38_RS10225;Dbxref=GenBank:WP_059895626.1;Name=WP_059895626.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009905621.1;locus_tag=LDO38_RS10225;product=ATP-binding cassette domain-containing protein;protein_id=WP_059895626.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 65616 66425 . - . ID=gene-LDO38_RS10230;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=LDO38_RS10230;old_locus_tag=BVI2075_230103 NZ_CAJZAL010000123.1 Protein Homology CDS 65616 66425 . - 0 ID=cds-WP_059694758.1;Parent=gene-LDO38_RS10230;Dbxref=GenBank:WP_059694758.1;Name=WP_059694758.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ssuC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897155.1;locus_tag=LDO38_RS10230;product=aliphatic sulfonate ABC transporter permease SsuC;protein_id=WP_059694758.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 66442 67599 . - . ID=gene-LDO38_RS10235;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=LDO38_RS10235;old_locus_tag=BVI2075_230104 NZ_CAJZAL010000123.1 Protein Homology CDS 66442 67599 . - 0 ID=cds-WP_014722969.1;Parent=gene-LDO38_RS10235;Dbxref=GenBank:WP_014722969.1;Name=WP_014722969.1;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722969.1;locus_tag=LDO38_RS10235;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=WP_014722969.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 67941 68369 . + . ID=gene-LDO38_RS10240;Name=LDO38_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10240;old_locus_tag=BVI2075_230106 NZ_CAJZAL010000123.1 Protein Homology CDS 67941 68369 . + 0 ID=cds-WP_014722967.1;Parent=gene-LDO38_RS10240;Dbxref=GenBank:WP_014722967.1;Name=WP_014722967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722967.1;locus_tag=LDO38_RS10240;product=hypothetical protein;protein_id=WP_014722967.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 68500 69660 . - . ID=gene-LDO38_RS10245;Name=LDO38_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10245;old_locus_tag=BVI2075_230107 NZ_CAJZAL010000123.1 Protein Homology CDS 68500 69660 . - 0 ID=cds-WP_124259874.1;Parent=gene-LDO38_RS10245;Dbxref=GenBank:WP_124259874.1;Name=WP_124259874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484164.1;locus_tag=LDO38_RS10245;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_124259874.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 69692 70024 . - . ID=gene-LDO38_RS10250;Name=LDO38_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10250;old_locus_tag=BVI2075_230108 NZ_CAJZAL010000123.1 Protein Homology CDS 69692 70024 . - 0 ID=cds-WP_371464602.1;Parent=gene-LDO38_RS10250;Dbxref=GenBank:WP_371464602.1;Name=WP_371464602.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011342944.1;locus_tag=LDO38_RS10250;product=DMT family transporter;protein_id=WP_371464602.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 70034 70531 . - . ID=gene-LDO38_RS10255;Name=LDO38_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10255;old_locus_tag=BVI2075_230109 NZ_CAJZAL010000123.1 Protein Homology CDS 70034 70531 . - 0 ID=cds-WP_014722965.1;Parent=gene-LDO38_RS10255;Dbxref=GenBank:WP_014722965.1;Name=WP_014722965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092484.1;locus_tag=LDO38_RS10255;product=heme-degrading domain-containing protein;protein_id=WP_014722965.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 70745 70821 . + . ID=gene-LDO38_RS10260;Name=LDO38_RS10260;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS10260;old_locus_tag=BVI2075_TRNA4 NZ_CAJZAL010000123.1 tRNAscan-SE tRNA 70745 70821 . + . ID=rna-LDO38_RS10260;Parent=gene-LDO38_RS10260;anticodon=(pos:70779..70781);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS10260;product=tRNA-Met NZ_CAJZAL010000123.1 tRNAscan-SE exon 70745 70821 . + . ID=exon-LDO38_RS10260-1;Parent=rna-LDO38_RS10260;anticodon=(pos:70779..70781);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS10260;product=tRNA-Met NZ_CAJZAL010000123.1 RefSeq gene 70994 71539 . + . ID=gene-LDO38_RS10265;Name=LDO38_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10265;old_locus_tag=BVI2075_230112 NZ_CAJZAL010000123.1 Protein Homology CDS 70994 71539 . + 0 ID=cds-WP_011884676.1;Parent=gene-LDO38_RS10265;Dbxref=GenBank:WP_011884676.1;Name=WP_011884676.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897161.1;locus_tag=LDO38_RS10265;product=NUDIX hydrolase;protein_id=WP_011884676.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 71551 72315 . + . ID=gene-LDO38_RS10270;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=LDO38_RS10270;old_locus_tag=BVI2075_230113 NZ_CAJZAL010000123.1 Protein Homology CDS 71551 72315 . + 0 ID=cds-WP_014722964.1;Parent=gene-LDO38_RS10270;Dbxref=GenBank:WP_014722964.1;Name=WP_014722964.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414405.1;locus_tag=LDO38_RS10270;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_014722964.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 72349 73179 . + . ID=gene-LDO38_RS10275;Name=LDO38_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10275;old_locus_tag=BVI2075_230114 NZ_CAJZAL010000123.1 Protein Homology CDS 72349 73179 . + 0 ID=cds-WP_011884672.1;Parent=gene-LDO38_RS10275;Dbxref=GenBank:WP_011884672.1;Name=WP_011884672.1;Ontology_term=GO:0016598,GO:0004057;gbkey=CDS;go_function=arginyl-tRNA--protein transferase activity|0004057||IEA;go_process=protein arginylation|0016598||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897163.1;locus_tag=LDO38_RS10275;product=arginyltransferase;protein_id=WP_011884672.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 73339 74376 . + . ID=gene-LDO38_RS10280;Name=LDO38_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10280;old_locus_tag=BVI2075_230115 NZ_CAJZAL010000123.1 Protein Homology CDS 73339 74376 . + 0 ID=cds-WP_034193041.1;Parent=gene-LDO38_RS10280;Dbxref=GenBank:WP_034193041.1;Name=WP_034193041.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400200.1;locus_tag=LDO38_RS10280;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_034193041.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 74476 75270 . + . ID=gene-LDO38_RS10285;Name=LDO38_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10285;old_locus_tag=BVI2075_230116 NZ_CAJZAL010000123.1 Protein Homology CDS 74476 75270 . + 0 ID=cds-WP_011884668.1;Parent=gene-LDO38_RS10285;Dbxref=GenBank:WP_011884668.1;Name=WP_011884668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884668.1;locus_tag=LDO38_RS10285;product=cystine ABC transporter substrate-binding protein;protein_id=WP_011884668.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 75393 76085 . + . ID=gene-LDO38_RS10290;Name=LDO38_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10290;old_locus_tag=BVI2075_230117 NZ_CAJZAL010000123.1 Protein Homology CDS 75393 76085 . + 0 ID=cds-WP_041493821.1;Parent=gene-LDO38_RS10290;Dbxref=GenBank:WP_041493821.1;Name=WP_041493821.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521640.1;locus_tag=LDO38_RS10290;product=amino acid ABC transporter permease;protein_id=WP_041493821.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 76132 77118 . - . ID=gene-LDO38_RS10295;Name=LDO38_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10295;old_locus_tag=BVI2075_230118 NZ_CAJZAL010000123.1 Protein Homology CDS 76132 77118 . - 0 ID=cds-WP_059460557.1;Parent=gene-LDO38_RS10295;Dbxref=GenBank:WP_059460557.1;Name=WP_059460557.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758017.1;locus_tag=LDO38_RS10295;product=Gfo/Idh/MocA family protein;protein_id=WP_059460557.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 77216 77932 . - . ID=gene-LDO38_RS10300;Name=LDO38_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10300;old_locus_tag=BVI2075_230119 NZ_CAJZAL010000123.1 Protein Homology CDS 77216 77932 . - 0 ID=cds-WP_011884662.1;Parent=gene-LDO38_RS10300;Dbxref=GenBank:WP_011884662.1;Name=WP_011884662.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884662.1;locus_tag=LDO38_RS10300;product=FadR/GntR family transcriptional regulator;protein_id=WP_011884662.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 78215 78907 . - . ID=gene-LDO38_RS10305;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=LDO38_RS10305;old_locus_tag=BVI2075_230120 NZ_CAJZAL010000123.1 Protein Homology CDS 78215 78907 . - 0 ID=cds-WP_011884660.1;Parent=gene-LDO38_RS10305;Dbxref=GenBank:WP_011884660.1;Name=WP_011884660.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884660.1;locus_tag=LDO38_RS10305;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_011884660.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 78997 79827 . - . ID=gene-LDO38_RS10310;Name=LDO38_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10310;old_locus_tag=BVI2075_230121 NZ_CAJZAL010000123.1 Protein Homology CDS 78997 79827 . - 0 ID=cds-WP_046427142.1;Parent=gene-LDO38_RS10310;Dbxref=GenBank:WP_046427142.1;Name=WP_046427142.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476120.1;locus_tag=LDO38_RS10310;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_046427142.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 79959 80702 . - . ID=gene-LDO38_RS10315;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=LDO38_RS10315;old_locus_tag=BVI2075_230122 NZ_CAJZAL010000123.1 Protein Homology CDS 79959 80702 . - 0 ID=cds-WP_011884657.1;Parent=gene-LDO38_RS10315;Dbxref=GenBank:WP_011884657.1;Name=WP_011884657.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884657.1;locus_tag=LDO38_RS10315;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_011884657.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 80852 83335 . - . ID=gene-LDO38_RS10320;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=LDO38_RS10320;old_locus_tag=BVI2075_230123 NZ_CAJZAL010000123.1 Protein Homology CDS 80852 83335 . - 0 ID=cds-WP_011884656.1;Parent=gene-LDO38_RS10320;Dbxref=GenBank:WP_011884656.1;Name=WP_011884656.1;Ontology_term=GO:0003723,GO:0004518;gbkey=CDS;gene=rnr;go_function=RNA binding|0003723||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404898.1;locus_tag=LDO38_RS10320;product=ribonuclease R;protein_id=WP_011884656.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 83608 83803 . + . ID=gene-LDO38_RS30510;Name=LDO38_RS30510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30510;partial=true;start_range=.,83608 NZ_CAJZAL010000123.1 GeneMarkS-2+ CDS 83608 83803 . + 1 ID=cds-WP_435520934.1;Parent=gene-LDO38_RS30510;Dbxref=GenBank:WP_435520934.1;Name=WP_435520934.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30510;partial=true;product=hypothetical protein;protein_id=WP_435520934.1;start_range=.,83608;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 83833 83919 . + . ID=gene-LDO38_RS10325;Name=LDO38_RS10325;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS10325;old_locus_tag=BVI2075_TRNA5 NZ_CAJZAL010000123.1 tRNAscan-SE tRNA 83833 83919 . + . ID=rna-LDO38_RS10325;Parent=gene-LDO38_RS10325;anticodon=(pos:83867..83869);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS10325;product=tRNA-Leu NZ_CAJZAL010000123.1 tRNAscan-SE exon 83833 83919 . + . ID=exon-LDO38_RS10325-1;Parent=rna-LDO38_RS10325;anticodon=(pos:83867..83869);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS10325;product=tRNA-Leu NZ_CAJZAL010000123.1 RefSeq gene 84429 85676 . + . ID=gene-LDO38_RS10330;Name=LDO38_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10330;old_locus_tag=BVI2075_230126 NZ_CAJZAL010000123.1 Protein Homology CDS 84429 85676 . + 0 ID=cds-WP_045579474.1;Parent=gene-LDO38_RS10330;Dbxref=GenBank:WP_045579474.1;Name=WP_045579474.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554715.1;locus_tag=LDO38_RS10330;product=ROK family protein;protein_id=WP_045579474.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 85663 87216 . + . ID=gene-LDO38_RS10335;Name=LDO38_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10335;old_locus_tag=BVI2075_230127 NZ_CAJZAL010000123.1 Protein Homology CDS 85663 87216 . + 0 ID=cds-WP_014722957.1;Parent=gene-LDO38_RS10335;Dbxref=GenBank:WP_014722957.1;Name=WP_014722957.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545297.1;locus_tag=LDO38_RS10335;product=sugar ABC transporter ATP-binding protein;protein_id=WP_014722957.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 87255 88292 . + . ID=gene-LDO38_RS10340;Name=LDO38_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10340;old_locus_tag=BVI2075_230128 NZ_CAJZAL010000123.1 Protein Homology CDS 87255 88292 . + 0 ID=cds-WP_011884653.1;Parent=gene-LDO38_RS10340;Dbxref=GenBank:WP_011884653.1;Name=WP_011884653.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410134.1;locus_tag=LDO38_RS10340;product=ABC transporter permease subunit;protein_id=WP_011884653.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 88375 89319 . + . ID=gene-LDO38_RS10345;Name=LDO38_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10345;old_locus_tag=BVI2075_230129 NZ_CAJZAL010000123.1 Protein Homology CDS 88375 89319 . + 0 ID=cds-WP_011884652.1;Parent=gene-LDO38_RS10345;Dbxref=GenBank:WP_011884652.1;Name=WP_011884652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545295.1;locus_tag=LDO38_RS10345;product=ABC transporter substrate-binding protein;protein_id=WP_011884652.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 89609 91327 . - . ID=gene-LDO38_RS10350;Name=LDO38_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10350;old_locus_tag=BVI2075_230130 NZ_CAJZAL010000123.1 Protein Homology CDS 89609 91327 . - 0 ID=cds-WP_059476067.1;Parent=gene-LDO38_RS10350;Dbxref=GenBank:WP_059476067.1;Name=WP_059476067.1;Ontology_term=GO:0015103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=inorganic anion transmembrane transporter activity|0015103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884651.1;locus_tag=LDO38_RS10350;product=SulP family inorganic anion transporter;protein_id=WP_059476067.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 91366 91992 . - . ID=gene-LDO38_RS10355;Name=LDO38_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10355;old_locus_tag=BVI2075_230131 NZ_CAJZAL010000123.1 Protein Homology CDS 91366 91992 . - 0 ID=cds-WP_011884649.1;Parent=gene-LDO38_RS10355;Dbxref=GenBank:WP_011884649.1;Name=WP_011884649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416550.1;locus_tag=LDO38_RS10355;product=ParB-like protein;protein_id=WP_011884649.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 92104 92646 . - . ID=gene-LDO38_RS10360;Name=LDO38_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10360;old_locus_tag=BVI2075_230132 NZ_CAJZAL010000123.1 Protein Homology CDS 92104 92646 . - 0 ID=cds-WP_041493958.1;Parent=gene-LDO38_RS10360;Dbxref=GenBank:WP_041493958.1;Name=WP_041493958.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884647.1;locus_tag=LDO38_RS10360;product=GNAT family N-acetyltransferase;protein_id=WP_041493958.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 92915 94135 . + . ID=gene-LDO38_RS10365;Name=LDO38_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10365;old_locus_tag=BVI2075_230133 NZ_CAJZAL010000123.1 Protein Homology CDS 92915 94135 . + 0 ID=cds-WP_014722954.1;Parent=gene-LDO38_RS10365;Dbxref=GenBank:WP_014722954.1;Name=WP_014722954.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545290.1;locus_tag=LDO38_RS10365;product=MFS transporter;protein_id=WP_014722954.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 94352 95170 . + . ID=gene-LDO38_RS10370;Name=LDO38_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10370;old_locus_tag=BVI2075_230134 NZ_CAJZAL010000123.1 Protein Homology CDS 94352 95170 . + 0 ID=cds-WP_045579142.1;Parent=gene-LDO38_RS10370;Dbxref=GenBank:WP_045579142.1;Name=WP_045579142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884645.1;locus_tag=LDO38_RS10370;product=TetR/AcrR family transcriptional regulator;protein_id=WP_045579142.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 95536 97290 . + . ID=gene-LDO38_RS10375;Name=LDO38_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10375;old_locus_tag=BVI2075_230137 NZ_CAJZAL010000123.1 Protein Homology CDS 95536 97290 . + 0 ID=cds-WP_045579143.1;Parent=gene-LDO38_RS10375;Dbxref=GenBank:WP_045579143.1;Name=WP_045579143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722951.1;locus_tag=LDO38_RS10375;product=AMP-binding protein;protein_id=WP_045579143.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 97320 98237 . + . ID=gene-LDO38_RS10380;Name=LDO38_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10380;old_locus_tag=BVI2075_230138 NZ_CAJZAL010000123.1 Protein Homology CDS 97320 98237 . + 0 ID=cds-WP_059894897.1;Parent=gene-LDO38_RS10380;Dbxref=GenBank:WP_059894897.1;Name=WP_059894897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485282.1;locus_tag=LDO38_RS10380;product=DUF1571 domain-containing protein;protein_id=WP_059894897.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 98268 98549 . - . ID=gene-LDO38_RS10385;Name=LDO38_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10385;old_locus_tag=BVI2075_230139 NZ_CAJZAL010000123.1 Protein Homology CDS 98268 98549 . - 0 ID=cds-WP_041493957.1;Parent=gene-LDO38_RS10385;Dbxref=GenBank:WP_041493957.1;Name=WP_041493957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656717.1;locus_tag=LDO38_RS10385;product=PXPV repeat protein;protein_id=WP_041493957.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 98844 99401 . + . ID=gene-LDO38_RS10390;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=LDO38_RS10390;old_locus_tag=BVI2075_230140 NZ_CAJZAL010000123.1 Protein Homology CDS 98844 99401 . + 0 ID=cds-WP_059561044.1;Parent=gene-LDO38_RS10390;Dbxref=GenBank:WP_059561044.1;Name=WP_059561044.1;Ontology_term=GO:0016070,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545286.1;locus_tag=LDO38_RS10390;product=RNA chaperone Hfq;protein_id=WP_059561044.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 99485 100189 . - . ID=gene-LDO38_RS10395;Name=LDO38_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10395;old_locus_tag=BVI2075_230141 NZ_CAJZAL010000123.1 Protein Homology CDS 99485 100189 . - 0 ID=cds-WP_011884635.1;Parent=gene-LDO38_RS10395;Dbxref=GenBank:WP_011884635.1;Name=WP_011884635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753912.1;locus_tag=LDO38_RS10395;product=DUF2968 domain-containing protein;protein_id=WP_011884635.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 100244 101635 . - . ID=gene-LDO38_RS10400;Name=LDO38_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10400;old_locus_tag=BVI2075_230142 NZ_CAJZAL010000123.1 Protein Homology CDS 100244 101635 . - 0 ID=cds-WP_060043213.1;Parent=gene-LDO38_RS10400;Dbxref=GenBank:WP_060043213.1;Name=WP_060043213.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026562.1;locus_tag=LDO38_RS10400;product=sigma 54-interacting transcriptional regulator;protein_id=WP_060043213.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 101647 103686 . - . ID=gene-LDO38_RS10405;Name=LDO38_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10405;old_locus_tag=BVI2075_230143 NZ_CAJZAL010000123.1 Protein Homology CDS 101647 103686 . - 0 ID=cds-WP_080938704.1;Parent=gene-LDO38_RS10405;Dbxref=GenBank:WP_080938704.1;Name=WP_080938704.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021493.6;locus_tag=LDO38_RS10405;product=pilus assembly protein TadG-related protein;protein_id=WP_080938704.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 103698 104021 . - . ID=gene-LDO38_RS10410;Name=LDO38_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10410;old_locus_tag=BVI2075_230144 NZ_CAJZAL010000123.1 Protein Homology CDS 103698 104021 . - 0 ID=cds-WP_034195566.1;Parent=gene-LDO38_RS10410;Dbxref=GenBank:WP_034195566.1;Name=WP_034195566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213452.1;locus_tag=LDO38_RS10410;product=DUF3613 domain-containing protein;protein_id=WP_034195566.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 104042 104884 . - . ID=gene-LDO38_RS10415;Name=LDO38_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10415;old_locus_tag=BVI2075_230145 NZ_CAJZAL010000123.1 Protein Homology CDS 104042 104884 . - 0 ID=cds-WP_034195567.1;Parent=gene-LDO38_RS10415;Dbxref=GenBank:WP_034195567.1;Name=WP_034195567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897192.1;locus_tag=LDO38_RS10415;product=tetratricopeptide repeat protein;protein_id=WP_034195567.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 104902 105894 . - . ID=gene-LDO38_RS10420;Name=LDO38_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10420;old_locus_tag=BVI2075_230146 NZ_CAJZAL010000123.1 Protein Homology CDS 104902 105894 . - 0 ID=cds-WP_034195568.1;Parent=gene-LDO38_RS10420;Dbxref=GenBank:WP_034195568.1;Name=WP_034195568.1;Ontology_term=GO:0015628,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416976.1;locus_tag=LDO38_RS10420;product=type II secretion system F family protein;protein_id=WP_034195568.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 105899 106885 . - . ID=gene-LDO38_RS10425;Name=LDO38_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10425;old_locus_tag=BVI2075_230147 NZ_CAJZAL010000123.1 Protein Homology CDS 105899 106885 . - 0 ID=cds-WP_034195569.1;Parent=gene-LDO38_RS10425;Dbxref=GenBank:WP_034195569.1;Name=WP_034195569.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526866.1;locus_tag=LDO38_RS10425;product=type II secretion system F family protein;protein_id=WP_034195569.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 106878 108242 . - . ID=gene-LDO38_RS10430;Name=LDO38_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10430;old_locus_tag=BVI2075_230148 NZ_CAJZAL010000123.1 Protein Homology CDS 106878 108242 . - 0 ID=cds-WP_034195570.1;Parent=gene-LDO38_RS10430;Dbxref=GenBank:WP_034195570.1;Name=WP_034195570.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213456.1;locus_tag=LDO38_RS10430;product=CpaF family protein;protein_id=WP_034195570.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 108246 109520 . - . ID=gene-LDO38_RS10435;Name=LDO38_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10435;old_locus_tag=BVI2075_230149 NZ_CAJZAL010000123.1 Protein Homology CDS 108246 109520 . - 0 ID=cds-WP_059568633.1;Parent=gene-LDO38_RS10435;Dbxref=GenBank:WP_059568633.1;Name=WP_059568633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891453.1;locus_tag=LDO38_RS10435;product=fimbrial protein;protein_id=WP_059568633.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 109581 110912 . - . ID=gene-LDO38_RS10440;Name=LDO38_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10440;old_locus_tag=BVI2075_230150 NZ_CAJZAL010000123.1 Protein Homology CDS 109581 110912 . - 0 ID=cds-WP_011884617.1;Parent=gene-LDO38_RS10440;Dbxref=GenBank:WP_011884617.1;Name=WP_011884617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891455.1;locus_tag=LDO38_RS10440;product=type II and III secretion system protein family protein;protein_id=WP_011884617.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 110977 111921 . - . ID=gene-LDO38_RS10445;Name=cpaB;gbkey=Gene;gene=cpaB;gene_biotype=protein_coding;locus_tag=LDO38_RS10445;old_locus_tag=BVI2075_230151 NZ_CAJZAL010000123.1 Protein Homology CDS 110977 111921 . - 0 ID=cds-WP_124260210.1;Parent=gene-LDO38_RS10445;Dbxref=GenBank:WP_124260210.1;Name=WP_124260210.1;gbkey=CDS;gene=cpaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400303.1;locus_tag=LDO38_RS10445;product=Flp pilus assembly protein CpaB;protein_id=WP_124260210.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 111997 112491 . - . ID=gene-LDO38_RS10450;Name=LDO38_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10450;old_locus_tag=BVI2075_230152 NZ_CAJZAL010000123.1 Protein Homology CDS 111997 112491 . - 0 ID=cds-WP_034195574.1;Parent=gene-LDO38_RS10450;Dbxref=GenBank:WP_034195574.1;Name=WP_034195574.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414068.1;locus_tag=LDO38_RS10450;product=TadE/TadG family type IV pilus assembly protein;protein_id=WP_034195574.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 112488 112988 . - . ID=gene-LDO38_RS10455;Name=LDO38_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10455;old_locus_tag=BVI2075_230153 NZ_CAJZAL010000123.1 Protein Homology CDS 112488 112988 . - 0 ID=cds-WP_034195575.1;Parent=gene-LDO38_RS10455;Dbxref=GenBank:WP_034195575.1;Name=WP_034195575.1;Ontology_term=GO:0006508,GO:0004190;gbkey=CDS;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404935.1;locus_tag=LDO38_RS10455;product=A24 family peptidase;protein_id=WP_034195575.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 113088 113315 . - . ID=gene-LDO38_RS10460;Name=LDO38_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10460;old_locus_tag=BVI2075_230154 NZ_CAJZAL010000123.1 Protein Homology CDS 113088 113315 . - 0 ID=cds-WP_034195576.1;Parent=gene-LDO38_RS10460;Dbxref=GenBank:WP_034195576.1;Name=WP_034195576.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404936.1;locus_tag=LDO38_RS10460;product=Flp family type IVb pilin;protein_id=WP_034195576.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 113977 115416 . + . ID=gene-LDO38_RS10465;Name=LDO38_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10465;old_locus_tag=BVI2075_230156 NZ_CAJZAL010000123.1 Protein Homology CDS 113977 115416 . + 0 ID=cds-WP_212180420.1;Parent=gene-LDO38_RS10465;Dbxref=GenBank:WP_212180420.1;Name=WP_212180420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363754.1;locus_tag=LDO38_RS10465;product=collagen-like triple helix repeat-containing protein;protein_id=WP_212180420.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 115458 116810 . + . ID=gene-LDO38_RS10470;Name=LDO38_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10470;old_locus_tag=BVI2075_230158 NZ_CAJZAL010000123.1 Protein Homology CDS 115458 116810 . + 0 ID=cds-WP_045579151.1;Parent=gene-LDO38_RS10470;Dbxref=GenBank:WP_045579151.1;Name=WP_045579151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400310.1;locus_tag=LDO38_RS10470;product=collagen-like triple helix repeat-containing protein;protein_id=WP_045579151.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 116954 118639 . + . ID=gene-LDO38_RS10475;Name=LDO38_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10475;old_locus_tag=BVI2075_230159 NZ_CAJZAL010000123.1 Protein Homology CDS 116954 118639 . + 0 ID=cds-WP_014722936.1;Parent=gene-LDO38_RS10475;Dbxref=GenBank:WP_014722936.1;Name=WP_014722936.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363752.1;locus_tag=LDO38_RS10475;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_014722936.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 118806 119267 . + . ID=gene-LDO38_RS10480;Name=LDO38_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10480;old_locus_tag=BVI2075_230160 NZ_CAJZAL010000123.1 Protein Homology CDS 118806 119267 . + 0 ID=cds-WP_011884608.1;Parent=gene-LDO38_RS10480;Dbxref=GenBank:WP_011884608.1;Name=WP_011884608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526860.1;locus_tag=LDO38_RS10480;product=DUF2147 domain-containing protein;protein_id=WP_011884608.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 119368 119781 . - . ID=gene-LDO38_RS10485;Name=LDO38_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10485;old_locus_tag=BVI2075_230161 NZ_CAJZAL010000123.1 Protein Homology CDS 119368 119781 . - 0 ID=cds-WP_014722934.1;Parent=gene-LDO38_RS10485;Dbxref=GenBank:WP_014722934.1;Name=WP_014722934.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: protein motif:HMM:NF024736.6;locus_tag=LDO38_RS10485;product=transposase;protein_id=WP_014722934.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 119924 121021 . - . ID=gene-LDO38_RS10490;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=LDO38_RS10490;old_locus_tag=BVI2075_230162 NZ_CAJZAL010000123.1 Protein Homology CDS 119924 121021 . - 0 ID=cds-WP_011884606.1;Parent=gene-LDO38_RS10490;Dbxref=GenBank:WP_011884606.1;Name=WP_011884606.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011402415.1;locus_tag=LDO38_RS10490;product=cell division protein ZapE;protein_id=WP_011884606.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 121121 122551 . - . ID=gene-LDO38_RS10495;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=LDO38_RS10495;old_locus_tag=BVI2075_230163 NZ_CAJZAL010000123.1 Protein Homology CDS 121121 122551 . - 0 ID=cds-WP_011884605.1;Parent=gene-LDO38_RS10495;Dbxref=GenBank:WP_011884605.1;Name=WP_011884605.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884605.1;locus_tag=LDO38_RS10495;product=dihydrolipoyl dehydrogenase;protein_id=WP_011884605.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 122633 123910 . - . ID=gene-LDO38_RS10500;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=LDO38_RS10500;old_locus_tag=BVI2075_230164 NZ_CAJZAL010000123.1 Protein Homology CDS 122633 123910 . - 0 ID=cds-WP_011884604.1;Parent=gene-LDO38_RS10500;Dbxref=GenBank:WP_011884604.1;Name=WP_011884604.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601426.1;locus_tag=LDO38_RS10500;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_011884604.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 124046 126910 . - . ID=gene-LDO38_RS10505;Name=LDO38_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10505;old_locus_tag=BVI2075_230165 NZ_CAJZAL010000123.1 Protein Homology CDS 124046 126910 . - 0 ID=cds-WP_011884602.1;Parent=gene-LDO38_RS10505;Dbxref=GenBank:WP_011884602.1;Name=WP_011884602.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526855.1;locus_tag=LDO38_RS10505;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_011884602.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 127226 129052 . - . ID=gene-LDO38_RS10510;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=LDO38_RS10510;old_locus_tag=BVI2075_230166 NZ_CAJZAL010000123.1 Protein Homology CDS 127226 129052 . - 0 ID=cds-WP_011884600.1;Parent=gene-LDO38_RS10510;Dbxref=GenBank:WP_011884600.1;Name=WP_011884600.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013588059.1;locus_tag=LDO38_RS10510;product=translational GTPase TypA;protein_id=WP_011884600.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 129387 129878 . + . ID=gene-LDO38_RS10515;Name=LDO38_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10515;old_locus_tag=BVI2075_230168 NZ_CAJZAL010000123.1 Protein Homology CDS 129387 129878 . + 0 ID=cds-WP_014722928.1;Parent=gene-LDO38_RS10515;Dbxref=GenBank:WP_014722928.1;Name=WP_014722928.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351804.1;locus_tag=LDO38_RS10515;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_014722928.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 129966 131471 . + . ID=gene-LDO38_RS10520;Name=LDO38_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10520;old_locus_tag=BVI2075_230169 NZ_CAJZAL010000123.1 Protein Homology CDS 129966 131471 . + 0 ID=cds-WP_011884596.1;Parent=gene-LDO38_RS10520;Dbxref=GenBank:WP_011884596.1;Name=WP_011884596.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363745.1;locus_tag=LDO38_RS10520;product=efflux transporter outer membrane subunit;protein_id=WP_011884596.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 131524 132747 . + . ID=gene-LDO38_RS10525;Name=LDO38_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10525;old_locus_tag=BVI2075_230170 NZ_CAJZAL010000123.1 Protein Homology CDS 131524 132747 . + 0 ID=cds-WP_014722926.1;Parent=gene-LDO38_RS10525;Dbxref=GenBank:WP_014722926.1;Name=WP_014722926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011205096.1;locus_tag=LDO38_RS10525;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_014722926.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 132775 134334 . + . ID=gene-LDO38_RS10530;Name=LDO38_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10530;old_locus_tag=BVI2075_230171 NZ_CAJZAL010000123.1 Protein Homology CDS 132775 134334 . + 0 ID=cds-WP_011884592.1;Parent=gene-LDO38_RS10530;Dbxref=GenBank:WP_011884592.1;Name=WP_011884592.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492561.1;locus_tag=LDO38_RS10530;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_011884592.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 134419 135351 . - . ID=gene-LDO38_RS10535;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=LDO38_RS10535;old_locus_tag=BVI2075_230172 NZ_CAJZAL010000123.1 Protein Homology CDS 134419 135351 . - 0 ID=cds-WP_014722924.1;Parent=gene-LDO38_RS10535;Dbxref=GenBank:WP_014722924.1;Name=WP_014722924.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363742.1;locus_tag=LDO38_RS10535;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_014722924.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 135364 135762 . - . ID=gene-LDO38_RS10540;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=LDO38_RS10540;old_locus_tag=BVI2075_230173 NZ_CAJZAL010000123.1 Protein Homology CDS 135364 135762 . - 0 ID=cds-WP_011884590.1;Parent=gene-LDO38_RS10540;Dbxref=GenBank:WP_011884590.1;Name=WP_011884590.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495346.1;locus_tag=LDO38_RS10540;product=30S ribosome-binding factor RbfA;protein_id=WP_011884590.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 135875 138799 . - . ID=gene-LDO38_RS10545;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=LDO38_RS10545;old_locus_tag=BVI2075_230174 NZ_CAJZAL010000123.1 Protein Homology CDS 135875 138799 . - 0 ID=cds-WP_011884588.1;Parent=gene-LDO38_RS10545;Dbxref=GenBank:WP_011884588.1;Name=WP_011884588.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402062.1;locus_tag=LDO38_RS10545;product=translation initiation factor IF-2;protein_id=WP_011884588.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 138891 140366 . - . ID=gene-LDO38_RS10550;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=LDO38_RS10550;old_locus_tag=BVI2075_230175 NZ_CAJZAL010000123.1 Protein Homology CDS 138891 140366 . - 0 ID=cds-WP_011884586.1;Parent=gene-LDO38_RS10550;Dbxref=GenBank:WP_011884586.1;Name=WP_011884586.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012432652.1;locus_tag=LDO38_RS10550;product=transcription termination factor NusA;protein_id=WP_011884586.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 140366 140824 . - . ID=gene-LDO38_RS10555;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=LDO38_RS10555;old_locus_tag=BVI2075_230176 NZ_CAJZAL010000123.1 Protein Homology CDS 140366 140824 . - 0 ID=cds-WP_011884583.1;Parent=gene-LDO38_RS10555;Dbxref=GenBank:WP_011884583.1;Name=WP_011884583.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402064.1;locus_tag=LDO38_RS10555;product=ribosome maturation factor RimP;protein_id=WP_011884583.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 141250 142947 . - . ID=gene-LDO38_RS10560;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=LDO38_RS10560;old_locus_tag=BVI2075_230177 NZ_CAJZAL010000123.1 Protein Homology CDS 141250 142947 . - 0 ID=cds-WP_045579155.1;Parent=gene-LDO38_RS10560;Dbxref=GenBank:WP_045579155.1;Name=WP_045579155.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328380.1;locus_tag=LDO38_RS10560;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_045579155.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 143008 144030 . - . ID=gene-LDO38_RS10565;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=LDO38_RS10565;old_locus_tag=BVI2075_230179 NZ_CAJZAL010000123.1 Protein Homology CDS 143008 144030 . - 0 ID=cds-WP_011884579.1;Parent=gene-LDO38_RS10565;Dbxref=GenBank:WP_011884579.1;Name=WP_011884579.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884579.1;locus_tag=LDO38_RS10565;product=SMC-Scp complex subunit ScpB;protein_id=WP_011884579.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 144428 145330 . - . ID=gene-LDO38_RS10570;Name=LDO38_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10570;old_locus_tag=BVI2075_230180 NZ_CAJZAL010000123.1 Protein Homology CDS 144428 145330 . - 0 ID=cds-WP_046422268.1;Parent=gene-LDO38_RS10570;Dbxref=GenBank:WP_046422268.1;Name=WP_046422268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193481.1;locus_tag=LDO38_RS10570;product=LysR family transcriptional regulator;protein_id=WP_046422268.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq pseudogene 145759 146154 . + . ID=gene-LDO38_RS10575;Name=LDO38_RS10575;end_range=146154,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS10575;old_locus_tag=BVI2075_230181;partial=true;pseudo=true NZ_CAJZAL010000123.1 Protein Homology CDS 145759 146154 . + 0 ID=cds-LDO38_RS10575;Parent=gene-LDO38_RS10575;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004803;end_range=146154,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603844.1;locus_tag=LDO38_RS10575;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 146354 146605 . + . ID=gene-LDO38_RS10580;Name=LDO38_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10580;old_locus_tag=BVI2075_230182 NZ_CAJZAL010000123.1 Protein Homology CDS 146354 146605 . + 0 ID=cds-WP_014722917.1;Parent=gene-LDO38_RS10580;Dbxref=GenBank:WP_014722917.1;Name=WP_014722917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656684.1;locus_tag=LDO38_RS10580;product=hypothetical protein;protein_id=WP_014722917.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 146814 147131 . - . ID=gene-LDO38_RS10585;Name=LDO38_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10585;old_locus_tag=BVI2075_230183 NZ_CAJZAL010000123.1 Protein Homology CDS 146814 147131 . - 0 ID=cds-WP_011884575.1;Parent=gene-LDO38_RS10585;Dbxref=GenBank:WP_011884575.1;Name=WP_011884575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332596.1;locus_tag=LDO38_RS10585;product=hypothetical protein;protein_id=WP_011884575.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 147289 148005 . + . ID=gene-LDO38_RS10590;Name=LDO38_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10590;old_locus_tag=BVI2075_230184 NZ_CAJZAL010000123.1 Protein Homology CDS 147289 148005 . + 0 ID=cds-WP_224056414.1;Parent=gene-LDO38_RS10590;Dbxref=GenBank:WP_224056414.1;Name=WP_224056414.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413752.1;locus_tag=LDO38_RS10590;product=YdcF family protein;protein_id=WP_224056414.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 148225 148494 . + . ID=gene-LDO38_RS10595;Name=LDO38_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10595;old_locus_tag=BVI2075_230186 NZ_CAJZAL010000123.1 Protein Homology CDS 148225 148494 . + 0 ID=cds-WP_011884573.1;Parent=gene-LDO38_RS10595;Dbxref=GenBank:WP_011884573.1;Name=WP_011884573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521679.1;locus_tag=LDO38_RS10595;product=hypothetical protein;protein_id=WP_011884573.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 148632 148889 . + . ID=gene-LDO38_RS10600;Name=LDO38_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10600;old_locus_tag=BVI2075_230187 NZ_CAJZAL010000123.1 Protein Homology CDS 148632 148889 . + 0 ID=cds-WP_011884572.1;Parent=gene-LDO38_RS10600;Dbxref=GenBank:WP_011884572.1;Name=WP_011884572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191628.1;locus_tag=LDO38_RS10600;product=hypothetical protein;protein_id=WP_011884572.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 149458 150669 . - . ID=gene-LDO38_RS10605;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=LDO38_RS10605;old_locus_tag=BVI2075_230189 NZ_CAJZAL010000123.1 Protein Homology CDS 149458 150669 . - 0 ID=cds-WP_034195588.1;Parent=gene-LDO38_RS10605;Dbxref=GenBank:WP_034195588.1;Name=WP_034195588.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656681.1;locus_tag=LDO38_RS10605;product=outer membrane protein assembly factor BamC;protein_id=WP_034195588.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 152046 153743 . + . ID=gene-LDO38_RS10610;Name=LDO38_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10610;old_locus_tag=BVI2075_230191 NZ_CAJZAL010000123.1 Protein Homology CDS 152046 153743 . + 0 ID=cds-WP_224056415.1;Parent=gene-LDO38_RS10610;Dbxref=GenBank:WP_224056415.1;Name=WP_224056415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722913.1;locus_tag=LDO38_RS10610;product=arylsulfotransferase family protein;protein_id=WP_224056415.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 154258 154334 . - . ID=gene-LDO38_RS10615;Name=LDO38_RS10615;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS10615;old_locus_tag=BVI2075_TRNA39 NZ_CAJZAL010000123.1 tRNAscan-SE tRNA 154258 154334 . - . ID=rna-LDO38_RS10615;Parent=gene-LDO38_RS10615;anticodon=(pos:complement(154298..154300));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS10615;product=tRNA-Pro NZ_CAJZAL010000123.1 tRNAscan-SE exon 154258 154334 . - . ID=exon-LDO38_RS10615-1;Parent=rna-LDO38_RS10615;anticodon=(pos:complement(154298..154300));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS10615;product=tRNA-Pro NZ_CAJZAL010000123.1 RefSeq gene 154429 155148 . - . ID=gene-LDO38_RS10620;Name=LDO38_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10620;old_locus_tag=BVI2075_230195 NZ_CAJZAL010000123.1 Protein Homology CDS 154429 155148 . - 0 ID=cds-WP_011884563.1;Parent=gene-LDO38_RS10620;Dbxref=GenBank:WP_011884563.1;Name=WP_011884563.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884563.1;locus_tag=LDO38_RS10620;product=class I SAM-dependent methyltransferase;protein_id=WP_011884563.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 155471 157681 . + . ID=gene-LDO38_RS10625;Name=LDO38_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10625;old_locus_tag=BVI2075_230197 NZ_CAJZAL010000123.1 Protein Homology CDS 155471 157681 . + 0 ID=cds-WP_059463765.1;Parent=gene-LDO38_RS10625;Dbxref=GenBank:WP_059463765.1;Name=WP_059463765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363734.1;locus_tag=LDO38_RS10625;product=hypothetical protein;protein_id=WP_059463765.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 157760 158173 . - . ID=gene-LDO38_RS10630;Name=LDO38_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10630;old_locus_tag=BVI2075_230199 NZ_CAJZAL010000123.1 Protein Homology CDS 157760 158173 . - 0 ID=cds-WP_045579208.1;Parent=gene-LDO38_RS10630;Dbxref=GenBank:WP_045579208.1;Name=WP_045579208.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526841.1;locus_tag=LDO38_RS10630;product=MerR family transcriptional regulator;protein_id=WP_045579208.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 158235 158621 . - . ID=gene-LDO38_RS10635;Name=LDO38_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10635;old_locus_tag=BVI2075_230200 NZ_CAJZAL010000123.1 Protein Homology CDS 158235 158621 . - 0 ID=cds-WP_011884557.1;Parent=gene-LDO38_RS10635;Dbxref=GenBank:WP_011884557.1;Name=WP_011884557.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884557.1;locus_tag=LDO38_RS10635;product=integration host factor subunit alpha;protein_id=WP_011884557.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 158694 161123 . - . ID=gene-LDO38_RS10640;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=LDO38_RS10640;old_locus_tag=BVI2075_230201 NZ_CAJZAL010000123.1 Protein Homology CDS 158694 161123 . - 0 ID=cds-WP_011884555.1;Parent=gene-LDO38_RS10640;Dbxref=GenBank:WP_011884555.1;Name=WP_011884555.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115709.1;locus_tag=LDO38_RS10640;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_011884555.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 161219 162232 . - . ID=gene-LDO38_RS10645;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=LDO38_RS10645;old_locus_tag=BVI2075_230202 NZ_CAJZAL010000123.1 Protein Homology CDS 161219 162232 . - 0 ID=cds-WP_006753318.1;Parent=gene-LDO38_RS10645;Dbxref=GenBank:WP_006753318.1;Name=WP_006753318.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753318.1;locus_tag=LDO38_RS10645;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_006753318.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 162381 162740 . - . ID=gene-LDO38_RS10650;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=LDO38_RS10650;old_locus_tag=BVI2075_230203 NZ_CAJZAL010000123.1 Protein Homology CDS 162381 162740 . - 0 ID=cds-WP_004192938.1;Parent=gene-LDO38_RS10650;Dbxref=GenBank:WP_004192938.1;Name=WP_004192938.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192938.1;locus_tag=LDO38_RS10650;product=50S ribosomal protein L20;protein_id=WP_004192938.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 162771 162968 . - . ID=gene-LDO38_RS10655;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=LDO38_RS10655;old_locus_tag=BVI2075_230204 NZ_CAJZAL010000123.1 Protein Homology CDS 162771 162968 . - 0 ID=cds-WP_004191477.1;Parent=gene-LDO38_RS10655;Dbxref=GenBank:WP_004191477.1;Name=WP_004191477.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012433738.1;locus_tag=LDO38_RS10655;product=50S ribosomal protein L35;protein_id=WP_004191477.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 163160 163684 . - . ID=gene-LDO38_RS10660;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=LDO38_RS10660;old_locus_tag=BVI2075_230206 NZ_CAJZAL010000123.1 Protein Homology CDS 163160 163684 . - 0 ID=cds-WP_072465527.1;Parent=gene-LDO38_RS10660;Dbxref=GenBank:WP_072465527.1;Name=WP_072465527.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012435921.1;locus_tag=LDO38_RS10660;product=translation initiation factor IF-3;protein_id=WP_072465527.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 163734 165641 . - . ID=gene-LDO38_RS10665;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=LDO38_RS10665;old_locus_tag=BVI2075_230207 NZ_CAJZAL010000123.1 Protein Homology CDS 163734 165641 . - 0 ID=cds-WP_011884549.1;Parent=gene-LDO38_RS10665;Dbxref=GenBank:WP_011884549.1;Name=WP_011884549.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191232.1;locus_tag=LDO38_RS10665;product=threonine--tRNA ligase;protein_id=WP_011884549.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 165913 165989 . - . ID=gene-LDO38_RS10670;Name=LDO38_RS10670;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS10670;old_locus_tag=BVI2075_TRNA38 NZ_CAJZAL010000123.1 tRNAscan-SE tRNA 165913 165989 . - . ID=rna-LDO38_RS10670;Parent=gene-LDO38_RS10670;anticodon=(pos:complement(165953..165955));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS10670;product=tRNA-Val NZ_CAJZAL010000123.1 tRNAscan-SE exon 165913 165989 . - . ID=exon-LDO38_RS10670-1;Parent=rna-LDO38_RS10670;anticodon=(pos:complement(165953..165955));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS10670;product=tRNA-Val NZ_CAJZAL010000123.1 RefSeq gene 166083 168317 . - . ID=gene-LDO38_RS10675;Name=LDO38_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10675;old_locus_tag=BVI2075_230208 NZ_CAJZAL010000123.1 Protein Homology CDS 166083 168317 . - 0 ID=cds-WP_011884547.1;Parent=gene-LDO38_RS10675;Dbxref=GenBank:WP_011884547.1;Name=WP_011884547.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402085.1;locus_tag=LDO38_RS10675;product=RelA/SpoT family protein;protein_id=WP_011884547.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 168357 168710 . - . ID=gene-LDO38_RS10680;Name=LDO38_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10680;old_locus_tag=BVI2075_230209 NZ_CAJZAL010000123.1 Protein Homology CDS 168357 168710 . - 0 ID=cds-WP_011884545.1;Parent=gene-LDO38_RS10680;Dbxref=GenBank:WP_011884545.1;Name=WP_011884545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486103.1;locus_tag=LDO38_RS10680;product=RidA family protein;protein_id=WP_011884545.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 168792 169688 . - . ID=gene-LDO38_RS10685;Name=LDO38_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10685;old_locus_tag=BVI2075_230210 NZ_CAJZAL010000123.1 Protein Homology CDS 168792 169688 . - 0 ID=cds-WP_069246374.1;Parent=gene-LDO38_RS10685;Dbxref=GenBank:WP_069246374.1;Name=WP_069246374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492553.1;locus_tag=LDO38_RS10685;product=alpha/beta fold hydrolase;protein_id=WP_069246374.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 169813 170718 . - . ID=gene-LDO38_RS10690;Name=LDO38_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10690;old_locus_tag=BVI2075_230211 NZ_CAJZAL010000123.1 Protein Homology CDS 169813 170718 . - 0 ID=cds-WP_059668455.1;Parent=gene-LDO38_RS10690;Dbxref=GenBank:WP_059668455.1;Name=WP_059668455.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884541.1;locus_tag=LDO38_RS10690;product=LysR family transcriptional regulator;protein_id=WP_059668455.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 170856 171413 . + . ID=gene-LDO38_RS10695;Name=LDO38_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10695;old_locus_tag=BVI2075_230213 NZ_CAJZAL010000123.1 Protein Homology CDS 170856 171413 . + 0 ID=cds-WP_059694789.1;Parent=gene-LDO38_RS10695;Dbxref=GenBank:WP_059694789.1;Name=WP_059694789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476192.1;locus_tag=LDO38_RS10695;product=ester cyclase;protein_id=WP_059694789.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 171431 172453 . + . ID=gene-LDO38_RS10700;Name=LDO38_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10700;old_locus_tag=BVI2075_230212 NZ_CAJZAL010000123.1 Protein Homology CDS 171431 172453 . + 0 ID=cds-WP_059624093.1;Parent=gene-LDO38_RS10700;Dbxref=GenBank:WP_059624093.1;Name=WP_059624093.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884538.1;locus_tag=LDO38_RS10700;product=polysaccharide deacetylase family protein;protein_id=WP_059624093.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 172491 173204 . + . ID=gene-LDO38_RS10705;Name=LDO38_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10705;old_locus_tag=BVI2075_230214 NZ_CAJZAL010000123.1 Protein Homology CDS 172491 173204 . + 0 ID=cds-WP_069246217.1;Parent=gene-LDO38_RS10705;Dbxref=GenBank:WP_069246217.1;Name=WP_069246217.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884537.1;locus_tag=LDO38_RS10705;product=SDR family oxidoreductase;protein_id=WP_069246217.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 173299 173940 . - . ID=gene-LDO38_RS10710;Name=LDO38_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10710;old_locus_tag=BVI2075_230215 NZ_CAJZAL010000123.1 Protein Homology CDS 173299 173940 . - 0 ID=cds-WP_014722902.1;Parent=gene-LDO38_RS10710;Dbxref=GenBank:WP_014722902.1;Name=WP_014722902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402088.1;locus_tag=LDO38_RS10710;product=CoA transferase subunit B;protein_id=WP_014722902.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 173942 174646 . - . ID=gene-LDO38_RS10715;Name=LDO38_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10715;old_locus_tag=BVI2075_230216 NZ_CAJZAL010000123.1 Protein Homology CDS 173942 174646 . - 0 ID=cds-WP_014722901.1;Parent=gene-LDO38_RS10715;Dbxref=GenBank:WP_014722901.1;Name=WP_014722901.1;Ontology_term=GO:0008410;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891596.1;locus_tag=LDO38_RS10715;product=CoA transferase subunit A;protein_id=WP_014722901.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 174870 175415 . + . ID=gene-LDO38_RS10720;Name=LDO38_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10720;old_locus_tag=BVI2075_230217 NZ_CAJZAL010000123.1 Protein Homology CDS 174870 175415 . + 0 ID=cds-WP_011884534.1;Parent=gene-LDO38_RS10720;Dbxref=GenBank:WP_011884534.1;Name=WP_011884534.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026504.1;locus_tag=LDO38_RS10720;product=PAS and helix-turn-helix domain-containing protein;protein_id=WP_011884534.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 175517 175948 . - . ID=gene-LDO38_RS10725;Name=LDO38_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10725;old_locus_tag=BVI2075_230218 NZ_CAJZAL010000123.1 Protein Homology CDS 175517 175948 . - 0 ID=cds-WP_014722899.1;Parent=gene-LDO38_RS10725;Dbxref=GenBank:WP_014722899.1;Name=WP_014722899.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402091.1;locus_tag=LDO38_RS10725;product=acyl-CoA thioesterase;protein_id=WP_014722899.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 175981 176757 . - . ID=gene-LDO38_RS10730;Name=LDO38_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10730;old_locus_tag=BVI2075_230219 NZ_CAJZAL010000123.1 Protein Homology CDS 175981 176757 . - 0 ID=cds-WP_011884532.1;Parent=gene-LDO38_RS10730;Dbxref=GenBank:WP_011884532.1;Name=WP_011884532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602148.1;locus_tag=LDO38_RS10730;product=SDR family oxidoreductase;protein_id=WP_011884532.1;transl_table=11 NZ_CAJZAL010000123.1 RefSeq gene 176933 177084 . + . ID=gene-LDO38_RS10735;Name=LDO38_RS10735;end_range=177084,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10735;partial=true NZ_CAJZAL010000123.1 Protein Homology CDS 176933 177084 . + 0 ID=cds-WP_212161761.1;Parent=gene-LDO38_RS10735;Dbxref=GenBank:WP_212161761.1;Name=WP_212161761.1;Ontology_term=GO:0016491;end_range=177084,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015003297.1;locus_tag=LDO38_RS10735;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_212161761.1;transl_table=11 ##sequence-region NZ_CAJZAL010000124.1 1 10658 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000124.1 RefSeq region 1 10658 . + . ID=NZ_CAJZAL010000124.1:1..10658;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_24 NZ_CAJZAL010000124.1 RefSeq gene 587 1972 . + . ID=gene-LDO38_RS10740;Name=LDO38_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10740;old_locus_tag=BVI2075_240001 NZ_CAJZAL010000124.1 Protein Homology CDS 587 1972 . + 0 ID=cds-WP_014725493.1;Parent=gene-LDO38_RS10740;Dbxref=GenBank:WP_014725493.1;Name=WP_014725493.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411412.1;locus_tag=LDO38_RS10740;product=MFS transporter;protein_id=WP_014725493.1;transl_table=11 NZ_CAJZAL010000124.1 RefSeq gene 2308 4020 . - . ID=gene-LDO38_RS10745;Name=LDO38_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10745;old_locus_tag=BVI2075_240002 NZ_CAJZAL010000124.1 Protein Homology CDS 2308 4020 . - 0 ID=cds-WP_224056418.1;Parent=gene-LDO38_RS10745;Dbxref=GenBank:WP_224056418.1;Name=WP_224056418.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733754.1;locus_tag=LDO38_RS10745;product=methyl-accepting chemotaxis protein;protein_id=WP_224056418.1;transl_table=11 NZ_CAJZAL010000124.1 RefSeq gene 4261 5655 . - . ID=gene-LDO38_RS10750;Name=LDO38_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10750;old_locus_tag=BVI2075_240003 NZ_CAJZAL010000124.1 Protein Homology CDS 4261 5655 . - 0 ID=cds-WP_224056419.1;Parent=gene-LDO38_RS10750;Dbxref=GenBank:WP_224056419.1;Name=WP_224056419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337133.1;locus_tag=LDO38_RS10750;product=aspartate aminotransferase family protein;protein_id=WP_224056419.1;transl_table=11 NZ_CAJZAL010000124.1 RefSeq gene 5687 7165 . - . ID=gene-LDO38_RS10755;Name=LDO38_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10755;old_locus_tag=BVI2075_240004 NZ_CAJZAL010000124.1 Protein Homology CDS 5687 7165 . - 0 ID=cds-WP_224056420.1;Parent=gene-LDO38_RS10755;Dbxref=GenBank:WP_224056420.1;Name=WP_224056420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372139.1;locus_tag=LDO38_RS10755;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_224056420.1;transl_table=11 NZ_CAJZAL010000124.1 RefSeq gene 7289 7759 . - . ID=gene-LDO38_RS10760;Name=LDO38_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10760;old_locus_tag=BVI2075_240005 NZ_CAJZAL010000124.1 Protein Homology CDS 7289 7759 . - 0 ID=cds-WP_011879619.1;Parent=gene-LDO38_RS10760;Dbxref=GenBank:WP_011879619.1;Name=WP_011879619.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372138.1;locus_tag=LDO38_RS10760;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011879619.1;transl_table=11 NZ_CAJZAL010000124.1 RefSeq gene 7773 8810 . - . ID=gene-LDO38_RS10765;Name=doeB;gbkey=Gene;gene=doeB;gene_biotype=protein_coding;locus_tag=LDO38_RS10765;old_locus_tag=BVI2075_240006 NZ_CAJZAL010000124.1 Protein Homology CDS 7773 8810 . - 0 ID=cds-WP_212172215.1;Parent=gene-LDO38_RS10765;Dbxref=GenBank:WP_212172215.1;Name=WP_212172215.1;Ontology_term=GO:0042400;gbkey=CDS;gene=doeB;go_process=ectoine catabolic process|0042400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549338.1;locus_tag=LDO38_RS10765;product=N(2)-acetyl-L-2%2C4-diaminobutanoate deacetylase DoeB;protein_id=WP_212172215.1;transl_table=11 NZ_CAJZAL010000124.1 RefSeq gene 8815 10023 . - . ID=gene-LDO38_RS10770;Name=doeA;gbkey=Gene;gene=doeA;gene_biotype=protein_coding;locus_tag=LDO38_RS10770;old_locus_tag=BVI2075_240007 NZ_CAJZAL010000124.1 Protein Homology CDS 8815 10023 . - 0 ID=cds-WP_224056421.1;Parent=gene-LDO38_RS10770;Dbxref=GenBank:WP_224056421.1;Name=WP_224056421.1;Note=DoeA (degradation of ectoine A) is also called EutD (ectoine utilization D).;Ontology_term=GO:0042400;gbkey=CDS;gene=doeA;go_process=ectoine catabolic process|0042400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337137.1;locus_tag=LDO38_RS10770;product=ectoine hydrolase DoeA;protein_id=WP_224056421.1;transl_table=11 NZ_CAJZAL010000124.1 RefSeq pseudogene 10034 10658 . - . ID=gene-LDO38_RS10775;Name=LDO38_RS10775;end_range=10658,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS10775;old_locus_tag=BVI2075_240008;partial=true;pseudo=true NZ_CAJZAL010000124.1 Protein Homology CDS 10034 10658 . - 1 ID=cds-LDO38_RS10775;Parent=gene-LDO38_RS10775;Note=cyclodeaminase%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=10658,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416307.1;locus_tag=LDO38_RS10775;partial=true;product=ornithine cyclodeaminase family protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000125.1 1 66708 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000125.1 RefSeq region 1 66708 . + . ID=NZ_CAJZAL010000125.1:1..66708;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_25 NZ_CAJZAL010000125.1 RefSeq gene 1 1860 . - . ID=gene-LDO38_RS10780;Name=LDO38_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10780;partial=true;start_range=.,1 NZ_CAJZAL010000125.1 Protein Homology CDS 1 1860 . - 0 ID=cds-WP_224056422.1;Parent=gene-LDO38_RS10780;Dbxref=GenBank:WP_224056422.1;Name=WP_224056422.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881740.1;locus_tag=LDO38_RS10780;partial=true;product=type VI secretion system Vgr family protein;protein_id=WP_224056422.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 2150 3472 . + . ID=gene-LDO38_RS10785;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=LDO38_RS10785;old_locus_tag=BVI2075_250002 NZ_CAJZAL010000125.1 Protein Homology CDS 2150 3472 . + 0 ID=cds-WP_069246597.1;Parent=gene-LDO38_RS10785;Dbxref=GenBank:WP_069246597.1;Name=WP_069246597.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725205.1;locus_tag=LDO38_RS10785;product=type VI secretion system contractile sheath large subunit;protein_id=WP_069246597.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 3527 4873 . + . ID=gene-LDO38_RS10790;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=LDO38_RS10790;old_locus_tag=BVI2075_250003 NZ_CAJZAL010000125.1 Protein Homology CDS 3527 4873 . + 0 ID=cds-WP_072465318.1;Parent=gene-LDO38_RS10790;Dbxref=GenBank:WP_072465318.1;Name=WP_072465318.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759179.1;locus_tag=LDO38_RS10790;product=type VI secretion system baseplate subunit TssK;protein_id=WP_072465318.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 4870 5532 . + . ID=gene-LDO38_RS10795;Name=LDO38_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10795;old_locus_tag=BVI2075_250004 NZ_CAJZAL010000125.1 Protein Homology CDS 4870 5532 . + 0 ID=cds-WP_069246465.1;Parent=gene-LDO38_RS10795;Dbxref=GenBank:WP_069246465.1;Name=WP_069246465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882423.1;locus_tag=LDO38_RS10795;product=DotU family type IV/VI secretion system protein;protein_id=WP_069246465.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 5545 5976 . + . ID=gene-LDO38_RS10800;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=LDO38_RS10800;old_locus_tag=BVI2075_250005 NZ_CAJZAL010000125.1 Protein Homology CDS 5545 5976 . + 0 ID=cds-WP_011882424.1;Parent=gene-LDO38_RS10800;Dbxref=GenBank:WP_011882424.1;Name=WP_011882424.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724735.1;locus_tag=LDO38_RS10800;product=type VI secretion system baseplate subunit TssE;protein_id=WP_011882424.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 6213 7400 . - . ID=gene-LDO38_RS10805;Name=LDO38_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10805;old_locus_tag=BVI2075_250007 NZ_CAJZAL010000125.1 Protein Homology CDS 6213 7400 . - 0 ID=cds-WP_069240301.1;Parent=gene-LDO38_RS10805;Dbxref=GenBank:WP_069240301.1;Name=WP_069240301.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725210.1;locus_tag=LDO38_RS10805;product=porin;protein_id=WP_069240301.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 7557 7745 . + . ID=gene-LDO38_RS10810;Name=LDO38_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10810;old_locus_tag=BVI2075_250008 NZ_CAJZAL010000125.1 GeneMarkS-2+ CDS 7557 7745 . + 0 ID=cds-WP_124259745.1;Parent=gene-LDO38_RS10810;Dbxref=GenBank:WP_124259745.1;Name=WP_124259745.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS10810;product=hypothetical protein;protein_id=WP_124259745.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 8159 9541 . - . ID=gene-LDO38_RS10815;Name=LDO38_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10815;old_locus_tag=BVI2075_250010 NZ_CAJZAL010000125.1 Protein Homology CDS 8159 9541 . - 0 ID=cds-WP_041494185.1;Parent=gene-LDO38_RS10815;Dbxref=GenBank:WP_041494185.1;Name=WP_041494185.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604101.1;locus_tag=LDO38_RS10815;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_041494185.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 9568 10335 . - . ID=gene-LDO38_RS10820;Name=LDO38_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10820;old_locus_tag=BVI2075_250011 NZ_CAJZAL010000125.1 Protein Homology CDS 9568 10335 . - 0 ID=cds-WP_014725212.1;Parent=gene-LDO38_RS10820;Dbxref=GenBank:WP_014725212.1;Name=WP_014725212.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725212.1;locus_tag=LDO38_RS10820;product=ABC transporter permease;protein_id=WP_014725212.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 10332 11066 . - . ID=gene-LDO38_RS10825;Name=LDO38_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10825;old_locus_tag=BVI2075_250012 NZ_CAJZAL010000125.1 Protein Homology CDS 10332 11066 . - 0 ID=cds-WP_014725213.1;Parent=gene-LDO38_RS10825;Dbxref=GenBank:WP_014725213.1;Name=WP_014725213.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092711.1;locus_tag=LDO38_RS10825;product=ABC transporter permease;protein_id=WP_014725213.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 11072 11875 . - . ID=gene-LDO38_RS10830;Name=LDO38_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10830;old_locus_tag=BVI2075_250013 NZ_CAJZAL010000125.1 Protein Homology CDS 11072 11875 . - 0 ID=cds-WP_041494186.1;Parent=gene-LDO38_RS10830;Dbxref=GenBank:WP_041494186.1;Name=WP_041494186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603116.1;locus_tag=LDO38_RS10830;product=transporter substrate-binding domain-containing protein;protein_id=WP_041494186.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 12239 12817 . - . ID=gene-LDO38_RS10835;Name=LDO38_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10835;old_locus_tag=BVI2075_250014 NZ_CAJZAL010000125.1 Protein Homology CDS 12239 12817 . - 0 ID=cds-WP_011882426.1;Parent=gene-LDO38_RS10835;Dbxref=GenBank:WP_011882426.1;Name=WP_011882426.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725215.1;locus_tag=LDO38_RS10835;product=LysE family translocator;protein_id=WP_011882426.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 12867 14390 . - . ID=gene-LDO38_RS10840;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=LDO38_RS10840;old_locus_tag=BVI2075_250015 NZ_CAJZAL010000125.1 Protein Homology CDS 12867 14390 . - 0 ID=cds-WP_069240304.1;Parent=gene-LDO38_RS10840;Dbxref=GenBank:WP_069240304.1;Name=WP_069240304.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882427.1;locus_tag=LDO38_RS10840;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_069240304.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 14425 16029 . - . ID=gene-LDO38_RS10845;Name=LDO38_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10845;old_locus_tag=BVI2075_250016 NZ_CAJZAL010000125.1 Protein Homology CDS 14425 16029 . - 0 ID=cds-WP_354003678.1;Parent=gene-LDO38_RS10845;Dbxref=GenBank:WP_354003678.1;Name=WP_354003678.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725217.1;locus_tag=LDO38_RS10845;product=gamma-glutamyltransferase family protein;protein_id=WP_354003678.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 15996 16823 . - . ID=gene-LDO38_RS10850;Name=LDO38_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10850;old_locus_tag=BVI2075_250017 NZ_CAJZAL010000125.1 Protein Homology CDS 15996 16823 . - 0 ID=cds-WP_224056423.1;Parent=gene-LDO38_RS10850;Dbxref=GenBank:WP_224056423.1;Name=WP_224056423.1;Ontology_term=GO:0009058;gbkey=CDS;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725218.1;locus_tag=LDO38_RS10850;product=thioesterase II family protein;protein_id=WP_224056423.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 16845 17468 . - . ID=gene-LDO38_RS10855;Name=LDO38_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10855;old_locus_tag=BVI2075_250018 NZ_CAJZAL010000125.1 Protein Homology CDS 16845 17468 . - 0 ID=cds-WP_011882430.1;Parent=gene-LDO38_RS10855;Dbxref=GenBank:WP_011882430.1;Name=WP_011882430.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882430.1;locus_tag=LDO38_RS10855;product=LysE family translocator;protein_id=WP_011882430.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 17534 18004 . - . ID=gene-LDO38_RS10860;Name=LDO38_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10860;old_locus_tag=BVI2075_250019 NZ_CAJZAL010000125.1 Protein Homology CDS 17534 18004 . - 0 ID=cds-WP_224056424.1;Parent=gene-LDO38_RS10860;Dbxref=GenBank:WP_224056424.1;Name=WP_224056424.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725219.1;locus_tag=LDO38_RS10860;product=GNAT family N-acetyltransferase;protein_id=WP_224056424.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 18109 19014 . - . ID=gene-LDO38_RS10865;Name=LDO38_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10865;old_locus_tag=BVI2075_250020 NZ_CAJZAL010000125.1 Protein Homology CDS 18109 19014 . - 0 ID=cds-WP_011882432.1;Parent=gene-LDO38_RS10865;Dbxref=GenBank:WP_011882432.1;Name=WP_011882432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882432.1;locus_tag=LDO38_RS10865;product=alpha/beta fold hydrolase;protein_id=WP_011882432.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 19011 19247 . - . ID=gene-LDO38_RS10870;Name=LDO38_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10870;old_locus_tag=BVI2075_250021 NZ_CAJZAL010000125.1 Protein Homology CDS 19011 19247 . - 0 ID=cds-WP_011882433.1;Parent=gene-LDO38_RS10870;Dbxref=GenBank:WP_011882433.1;Name=WP_011882433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882433.1;locus_tag=LDO38_RS10870;product=phosphopantetheine-binding protein;protein_id=WP_011882433.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 19337 20260 . - . ID=gene-LDO38_RS10875;Name=LDO38_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10875;old_locus_tag=BVI2075_250022 NZ_CAJZAL010000125.1 Protein Homology CDS 19337 20260 . - 0 ID=cds-WP_014725222.1;Parent=gene-LDO38_RS10875;Dbxref=GenBank:WP_014725222.1;Name=WP_014725222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725222.1;locus_tag=LDO38_RS10875;product=chlorinating enzyme;protein_id=WP_014725222.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 20290 20547 . - . ID=gene-LDO38_RS10880;Name=LDO38_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10880;old_locus_tag=BVI2075_250023 NZ_CAJZAL010000125.1 Protein Homology CDS 20290 20547 . - 0 ID=cds-WP_034195170.1;Parent=gene-LDO38_RS10880;Dbxref=GenBank:WP_034195170.1;Name=WP_034195170.1;Ontology_term=GO:0006633,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749750.1;locus_tag=LDO38_RS10880;product=acyl carrier protein;protein_id=WP_034195170.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 20480 22075 . - . ID=gene-LDO38_RS10885;Name=LDO38_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10885;old_locus_tag=BVI2075_250024 NZ_CAJZAL010000125.1 Protein Homology CDS 20480 22075 . - 0 ID=cds-WP_069240306.1;Parent=gene-LDO38_RS10885;Dbxref=GenBank:WP_069240306.1;Name=WP_069240306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882436.1;locus_tag=LDO38_RS10885;product=amino acid adenylation domain-containing protein;protein_id=WP_069240306.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 22158 22994 . - . ID=gene-LDO38_RS10890;Name=LDO38_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10890;old_locus_tag=BVI2075_250025 NZ_CAJZAL010000125.1 Protein Homology CDS 22158 22994 . - 0 ID=cds-WP_069240307.1;Parent=gene-LDO38_RS10890;Dbxref=GenBank:WP_069240307.1;Name=WP_069240307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725224.1;locus_tag=LDO38_RS10890;product=alpha/beta fold hydrolase;protein_id=WP_069240307.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 23064 23873 . - . ID=gene-LDO38_RS10895;Name=LDO38_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10895;old_locus_tag=BVI2075_250026 NZ_CAJZAL010000125.1 Protein Homology CDS 23064 23873 . - 0 ID=cds-WP_011882438.1;Parent=gene-LDO38_RS10895;Dbxref=GenBank:WP_011882438.1;Name=WP_011882438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882438.1;locus_tag=LDO38_RS10895;product=hypothetical protein;protein_id=WP_011882438.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 24474 25376 . + . ID=gene-LDO38_RS10900;Name=LDO38_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10900;old_locus_tag=BVI2075_250030 NZ_CAJZAL010000125.1 Protein Homology CDS 24474 25376 . + 0 ID=cds-WP_011882439.1;Parent=gene-LDO38_RS10900;Dbxref=GenBank:WP_011882439.1;Name=WP_011882439.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882439.1;locus_tag=LDO38_RS10900;product=GHMP family kinase ATP-binding protein;protein_id=WP_011882439.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 25386 26390 . + . ID=gene-LDO38_RS10905;Name=LDO38_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10905;old_locus_tag=BVI2075_250031 NZ_CAJZAL010000125.1 Protein Homology CDS 25386 26390 . + 0 ID=cds-WP_045577892.1;Parent=gene-LDO38_RS10905;Dbxref=GenBank:WP_045577892.1;Name=WP_045577892.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882440.1;locus_tag=LDO38_RS10905;product=PLP-dependent cysteine synthase family protein;protein_id=WP_045577892.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 26394 28976 . + . ID=gene-LDO38_RS10910;Name=LDO38_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10910;old_locus_tag=BVI2075_250032 NZ_CAJZAL010000125.1 Protein Homology CDS 26394 28976 . + 0 ID=cds-WP_069240308.1;Parent=gene-LDO38_RS10910;Dbxref=GenBank:WP_069240308.1;Name=WP_069240308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882441.1;locus_tag=LDO38_RS10910;product=lyase family protein;protein_id=WP_069240308.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 28973 29785 . + . ID=gene-LDO38_RS10915;Name=LDO38_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10915;old_locus_tag=BVI2075_250033 NZ_CAJZAL010000125.1 Protein Homology CDS 28973 29785 . + 0 ID=cds-WP_224056426.1;Parent=gene-LDO38_RS10915;Dbxref=GenBank:WP_224056426.1;Name=WP_224056426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882442.1;locus_tag=LDO38_RS10915;product=formyl transferase;protein_id=WP_224056426.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 29786 30388 . + . ID=gene-LDO38_RS10920;Name=LDO38_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10920;old_locus_tag=BVI2075_250034 NZ_CAJZAL010000125.1 Protein Homology CDS 29786 30388 . + 0 ID=cds-WP_011882443.1;Parent=gene-LDO38_RS10920;Dbxref=GenBank:WP_011882443.1;Name=WP_011882443.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882443.1;locus_tag=LDO38_RS10920;product=LysE family translocator;protein_id=WP_011882443.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 30420 31376 . + . ID=gene-LDO38_RS10925;Name=LDO38_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10925;old_locus_tag=BVI2075_250035 NZ_CAJZAL010000125.1 Protein Homology CDS 30420 31376 . + 0 ID=cds-WP_059463122.1;Parent=gene-LDO38_RS10925;Dbxref=GenBank:WP_059463122.1;Name=WP_059463122.1;Ontology_term=GO:0016788,GO:0051499;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA,D-aminoacyl-tRNA deacylase activity|0051499||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725228.1;locus_tag=LDO38_RS10925;product=D-aminoacyl-tRNA deacylase;protein_id=WP_059463122.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 31388 32263 . - . ID=gene-LDO38_RS10930;Name=LDO38_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10930;old_locus_tag=BVI2075_250036 NZ_CAJZAL010000125.1 Protein Homology CDS 31388 32263 . - 0 ID=cds-WP_059463121.1;Parent=gene-LDO38_RS10930;Dbxref=GenBank:WP_059463121.1;Name=WP_059463121.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882445.1;locus_tag=LDO38_RS10930;product=helix-turn-helix transcriptional regulator;protein_id=WP_059463121.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 32916 34613 . - . ID=gene-LDO38_RS10935;Name=LDO38_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10935;old_locus_tag=BVI2075_250037 NZ_CAJZAL010000125.1 Protein Homology CDS 32916 34613 . - 0 ID=cds-WP_069224670.1;Parent=gene-LDO38_RS10935;Dbxref=GenBank:WP_069224670.1;Name=WP_069224670.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882447.1;locus_tag=LDO38_RS10935;product=methyl-accepting chemotaxis protein;protein_id=WP_069224670.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 34825 36015 . - . ID=gene-LDO38_RS10940;Name=LDO38_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10940;old_locus_tag=BVI2075_250038 NZ_CAJZAL010000125.1 Protein Homology CDS 34825 36015 . - 0 ID=cds-WP_011882448.1;Parent=gene-LDO38_RS10940;Dbxref=GenBank:WP_011882448.1;Name=WP_011882448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725232.1;locus_tag=LDO38_RS10940;product=EAL and HDOD domain-containing protein;protein_id=WP_011882448.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq pseudogene 36577 36851 . - . ID=gene-LDO38_RS10945;Name=LDO38_RS10945;end_range=36851,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS10945;partial=true;pseudo=true;start_range=.,36577 NZ_CAJZAL010000125.1 Protein Homology CDS 36577 36851 . - 0 ID=cds-LDO38_RS10945;Parent=gene-LDO38_RS10945;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=36851,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611492.1;locus_tag=LDO38_RS10945;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,36577;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 36953 38047 . - . ID=gene-LDO38_RS10950;Name=LDO38_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10950;old_locus_tag=BVI2075_250041 NZ_CAJZAL010000125.1 Protein Homology CDS 36953 38047 . - 0 ID=cds-WP_011882450.1;Parent=gene-LDO38_RS10950;Dbxref=GenBank:WP_011882450.1;Name=WP_011882450.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725233.1;locus_tag=LDO38_RS10950;product=potassium channel family protein;protein_id=WP_011882450.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 38119 39453 . - . ID=gene-LDO38_RS10955;Name=LDO38_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10955;old_locus_tag=BVI2075_250042 NZ_CAJZAL010000125.1 Protein Homology CDS 38119 39453 . - 0 ID=cds-WP_069246464.1;Parent=gene-LDO38_RS10955;Dbxref=GenBank:WP_069246464.1;Name=WP_069246464.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009900352.1;locus_tag=LDO38_RS10955;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_069246464.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 39649 40296 . + . ID=gene-LDO38_RS10960;Name=LDO38_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10960;old_locus_tag=BVI2075_250043 NZ_CAJZAL010000125.1 Protein Homology CDS 39649 40296 . + 0 ID=cds-WP_069240311.1;Parent=gene-LDO38_RS10960;Dbxref=GenBank:WP_069240311.1;Name=WP_069240311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485969.1;locus_tag=LDO38_RS10960;product=hypothetical protein;protein_id=WP_069240311.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 40670 40954 . + . ID=gene-LDO38_RS10965;Name=LDO38_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10965;old_locus_tag=BVI2075_250045 NZ_CAJZAL010000125.1 Protein Homology CDS 40670 40954 . + 0 ID=cds-WP_014725235.1;Parent=gene-LDO38_RS10965;Dbxref=GenBank:WP_014725235.1;Name=WP_014725235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337213.1;locus_tag=LDO38_RS10965;product=hypothetical protein;protein_id=WP_014725235.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 41484 42389 . + . ID=gene-LDO38_RS10970;Name=LDO38_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10970;old_locus_tag=BVI2075_250046 NZ_CAJZAL010000125.1 Protein Homology CDS 41484 42389 . + 0 ID=cds-WP_011882454.1;Parent=gene-LDO38_RS10970;Dbxref=GenBank:WP_011882454.1;Name=WP_011882454.1;Ontology_term=GO:0004096,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491398.1;locus_tag=LDO38_RS10970;product=manganese catalase family protein;protein_id=WP_011882454.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 42458 42976 . + . ID=gene-LDO38_RS10975;Name=LDO38_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10975;old_locus_tag=BVI2075_250047 NZ_CAJZAL010000125.1 Protein Homology CDS 42458 42976 . + 0 ID=cds-WP_011882455.1;Parent=gene-LDO38_RS10975;Dbxref=GenBank:WP_011882455.1;Name=WP_011882455.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882455.1;locus_tag=LDO38_RS10975;product=ferritin-like domain-containing protein;protein_id=WP_011882455.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 42995 43273 . - . ID=gene-LDO38_RS10980;Name=LDO38_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10980;old_locus_tag=BVI2075_250048 NZ_CAJZAL010000125.1 Protein Homology CDS 42995 43273 . - 0 ID=cds-WP_034195210.1;Parent=gene-LDO38_RS10980;Dbxref=GenBank:WP_034195210.1;Name=WP_034195210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482419.1;locus_tag=LDO38_RS10980;product=hypothetical protein;protein_id=WP_034195210.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 43370 44992 . - . ID=gene-LDO38_RS10985;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=LDO38_RS10985;old_locus_tag=BVI2075_250049 NZ_CAJZAL010000125.1 Protein Homology CDS 43370 44992 . - 0 ID=cds-WP_069246463.1;Parent=gene-LDO38_RS10985;Dbxref=GenBank:WP_069246463.1;Name=WP_069246463.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006047184.1;locus_tag=LDO38_RS10985;product=chaperonin GroEL;protein_id=WP_069246463.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 45073 45390 . - . ID=gene-LDO38_RS10990;Name=LDO38_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS10990;old_locus_tag=BVI2075_250050 NZ_CAJZAL010000125.1 Protein Homology CDS 45073 45390 . - 0 ID=cds-WP_059696367.1;Parent=gene-LDO38_RS10990;Dbxref=GenBank:WP_059696367.1;Name=WP_059696367.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545774.1;locus_tag=LDO38_RS10990;product=co-chaperone GroES;protein_id=WP_059696367.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq pseudogene 45556 46205 . - . ID=gene-LDO38_RS10995;Name=LDO38_RS10995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS10995;old_locus_tag=BVI2075_250052;pseudo=true NZ_CAJZAL010000125.1 Protein Homology CDS 45556 46205 . - 0 ID=cds-LDO38_RS10995;Parent=gene-LDO38_RS10995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404527.1;locus_tag=LDO38_RS10995;product=diguanylate cyclase;pseudo=true;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 46407 46736 . + . ID=gene-LDO38_RS11000;Name=LDO38_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11000;old_locus_tag=BVI2075_250054 NZ_CAJZAL010000125.1 Protein Homology CDS 46407 46736 . + 0 ID=cds-WP_059895185.1;Parent=gene-LDO38_RS11000;Dbxref=GenBank:WP_059895185.1;Name=WP_059895185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498550.1;locus_tag=LDO38_RS11000;product=hypothetical protein;protein_id=WP_059895185.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 46841 47122 . - . ID=gene-LDO38_RS11005;Name=LDO38_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11005;old_locus_tag=BVI2075_250055 NZ_CAJZAL010000125.1 Protein Homology CDS 46841 47122 . - 0 ID=cds-WP_045577881.1;Parent=gene-LDO38_RS11005;Dbxref=GenBank:WP_045577881.1;Name=WP_045577881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366268.1;locus_tag=LDO38_RS11005;product=hypothetical protein;protein_id=WP_045577881.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 47332 47541 . - . ID=gene-LDO38_RS11010;Name=LDO38_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11010;old_locus_tag=BVI2075_250056 NZ_CAJZAL010000125.1 Protein Homology CDS 47332 47541 . - 0 ID=cds-WP_034195215.1;Parent=gene-LDO38_RS11010;Dbxref=GenBank:WP_034195215.1;Name=WP_034195215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547465.1;locus_tag=LDO38_RS11010;product=hypothetical protein;protein_id=WP_034195215.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 47927 48781 . + . ID=gene-LDO38_RS11015;Name=LDO38_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11015;old_locus_tag=BVI2075_250057 NZ_CAJZAL010000125.1 Protein Homology CDS 47927 48781 . + 0 ID=cds-WP_011882463.1;Parent=gene-LDO38_RS11015;Dbxref=GenBank:WP_011882463.1;Name=WP_011882463.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199693.1;locus_tag=LDO38_RS11015;product=helix-turn-helix domain-containing protein;protein_id=WP_011882463.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 48893 50560 . + . ID=gene-LDO38_RS11020;Name=LDO38_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11020;old_locus_tag=BVI2075_250058 NZ_CAJZAL010000125.1 Protein Homology CDS 48893 50560 . + 0 ID=cds-WP_014725243.1;Parent=gene-LDO38_RS11020;Dbxref=GenBank:WP_014725243.1;Name=WP_014725243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216839.1;locus_tag=LDO38_RS11020;product=ATP-binding domain-containing protein;protein_id=WP_014725243.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 50648 52207 . - . ID=gene-LDO38_RS11025;Name=LDO38_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11025;old_locus_tag=BVI2075_250059 NZ_CAJZAL010000125.1 Protein Homology CDS 50648 52207 . - 0 ID=cds-WP_041494308.1;Parent=gene-LDO38_RS11025;Dbxref=GenBank:WP_041494308.1;Name=WP_041494308.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882465.1;locus_tag=LDO38_RS11025;product=methyl-accepting chemotaxis protein;protein_id=WP_041494308.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 52441 53955 . + . ID=gene-LDO38_RS11030;Name=LDO38_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11030;old_locus_tag=BVI2075_250060 NZ_CAJZAL010000125.1 Protein Homology CDS 52441 53955 . + 0 ID=cds-WP_059463115.1;Parent=gene-LDO38_RS11030;Dbxref=GenBank:WP_059463115.1;Name=WP_059463115.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882466.1;locus_tag=LDO38_RS11030;product=MDR family MFS transporter;protein_id=WP_059463115.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 54410 55408 . - . ID=gene-LDO38_RS11035;Name=LDO38_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11035;old_locus_tag=BVI2075_250061 NZ_CAJZAL010000125.1 Protein Homology CDS 54410 55408 . - 0 ID=cds-WP_034195218.1;Parent=gene-LDO38_RS11035;Dbxref=GenBank:WP_034195218.1;Name=WP_034195218.1;Ontology_term=GO:0003960,GO:0070402;gbkey=CDS;go_function=NADPH:quinone reductase activity|0003960||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753092.1;locus_tag=LDO38_RS11035;product=quinone oxidoreductase family protein;protein_id=WP_034195218.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 55534 56679 . + . ID=gene-LDO38_RS11040;Name=LDO38_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11040;old_locus_tag=BVI2075_250062 NZ_CAJZAL010000125.1 Protein Homology CDS 55534 56679 . + 0 ID=cds-WP_224056428.1;Parent=gene-LDO38_RS11040;Dbxref=GenBank:WP_224056428.1;Name=WP_224056428.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882468.1;locus_tag=LDO38_RS11040;product=LysR family transcriptional regulator;protein_id=WP_224056428.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 56776 57336 . + . ID=gene-LDO38_RS11045;Name=LDO38_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11045;old_locus_tag=BVI2075_250063 NZ_CAJZAL010000125.1 Protein Homology CDS 56776 57336 . + 0 ID=cds-WP_069246460.1;Parent=gene-LDO38_RS11045;Dbxref=GenBank:WP_069246460.1;Name=WP_069246460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396819.1;locus_tag=LDO38_RS11045;product=GNAT family N-acetyltransferase;protein_id=WP_069246460.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 57346 58212 . + . ID=gene-LDO38_RS11050;Name=LDO38_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11050;old_locus_tag=BVI2075_250064 NZ_CAJZAL010000125.1 Protein Homology CDS 57346 58212 . + 0 ID=cds-WP_014725248.1;Parent=gene-LDO38_RS11050;Dbxref=GenBank:WP_014725248.1;Name=WP_014725248.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659057.1;locus_tag=LDO38_RS11050;product=MerR family transcriptional regulator;protein_id=WP_014725248.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 58336 59316 . + . ID=gene-LDO38_RS11055;Name=LDO38_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11055;old_locus_tag=BVI2075_250065 NZ_CAJZAL010000125.1 Protein Homology CDS 58336 59316 . + 0 ID=cds-WP_034195219.1;Parent=gene-LDO38_RS11055;Dbxref=GenBank:WP_034195219.1;Name=WP_034195219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853072.1;locus_tag=LDO38_RS11055;product=sulfonate ABC transporter substrate-binding protein;protein_id=WP_034195219.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 59509 60471 . - . ID=gene-LDO38_RS11060;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=LDO38_RS11060;old_locus_tag=BVI2075_250066 NZ_CAJZAL010000125.1 Protein Homology CDS 59509 60471 . - 0 ID=cds-WP_011882472.1;Parent=gene-LDO38_RS11060;Dbxref=GenBank:WP_011882472.1;Name=WP_011882472.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525503.1;locus_tag=LDO38_RS11060;product=agmatinase;protein_id=WP_011882472.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 60820 61491 . + . ID=gene-LDO38_RS11065;Name=LDO38_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11065;old_locus_tag=BVI2075_250067 NZ_CAJZAL010000125.1 Protein Homology CDS 60820 61491 . + 0 ID=cds-WP_059461400.1;Parent=gene-LDO38_RS11065;Dbxref=GenBank:WP_059461400.1;Name=WP_059461400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366283.1;locus_tag=LDO38_RS11065;product=lysoplasmalogenase;protein_id=WP_059461400.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 61740 63341 . + . ID=gene-LDO38_RS11070;Name=LDO38_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11070;old_locus_tag=BVI2075_250068 NZ_CAJZAL010000125.1 Protein Homology CDS 61740 63341 . + 0 ID=cds-WP_069246459.1;Parent=gene-LDO38_RS11070;Dbxref=GenBank:WP_069246459.1;Name=WP_069246459.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216832.1;locus_tag=LDO38_RS11070;product=flavin-containing monooxygenase;protein_id=WP_069246459.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 63363 64301 . + . ID=gene-LDO38_RS11075;Name=LDO38_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11075;old_locus_tag=BVI2075_250070 NZ_CAJZAL010000125.1 Protein Homology CDS 63363 64301 . + 0 ID=cds-WP_059568019.1;Parent=gene-LDO38_RS11075;Dbxref=GenBank:WP_059568019.1;Name=WP_059568019.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882475.1;locus_tag=LDO38_RS11075;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_059568019.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 64298 65203 . + . ID=gene-LDO38_RS11080;Name=LDO38_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11080;old_locus_tag=BVI2075_250069 NZ_CAJZAL010000125.1 Protein Homology CDS 64298 65203 . + 0 ID=cds-WP_034195222.1;Parent=gene-LDO38_RS11080;Dbxref=GenBank:WP_034195222.1;Name=WP_034195222.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329071.1;locus_tag=LDO38_RS11080;product=metal-dependent hydrolase;protein_id=WP_034195222.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 65208 66071 . + . ID=gene-LDO38_RS11085;Name=LDO38_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11085;old_locus_tag=BVI2075_250071 NZ_CAJZAL010000125.1 Protein Homology CDS 65208 66071 . + 0 ID=cds-WP_224056429.1;Parent=gene-LDO38_RS11085;Dbxref=GenBank:WP_224056429.1;Name=WP_224056429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759159.1;locus_tag=LDO38_RS11085;product=alpha/beta fold hydrolase;protein_id=WP_224056429.1;transl_table=11 NZ_CAJZAL010000125.1 RefSeq gene 66247 66708 . + . ID=gene-LDO38_RS11090;Name=LDO38_RS11090;end_range=66708,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11090;partial=true NZ_CAJZAL010000125.1 Protein Homology CDS 66247 66708 . + 0 ID=cds-WP_224056430.1;Parent=gene-LDO38_RS11090;Dbxref=GenBank:WP_224056430.1;Name=WP_224056430.1;Ontology_term=GO:0071918,GO:0015204,GO:0016020;end_range=66708,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=urea transmembrane transporter activity|0015204||IEA;go_process=urea transmembrane transport|0071918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759163.1;locus_tag=LDO38_RS11090;partial=true;product=urea transporter;protein_id=WP_224056430.1;transl_table=11 ##sequence-region NZ_CAJZAL010000126.1 1 104193 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000126.1 RefSeq region 1 104193 . + . ID=NZ_CAJZAL010000126.1:1..104193;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_26 NZ_CAJZAL010000126.1 RefSeq gene 1 133 . + . ID=gene-LDO38_RS30515;Name=LDO38_RS30515;end_range=133,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30515;old_locus_tag=BVI2075_260001;partial=true;start_range=.,1 NZ_CAJZAL010000126.1 Protein Homology CDS 1 133 . + 1 ID=cds-WP_435520938.1;Parent=gene-LDO38_RS30515;Dbxref=GenBank:WP_435520938.1;Name=WP_435520938.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700;end_range=133,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484701.1;locus_tag=LDO38_RS30515;partial=true;product=sigma factor;protein_id=WP_435520938.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 144 704 . + . ID=gene-LDO38_RS11095;Name=LDO38_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11095;old_locus_tag=BVI2075_260003;partial=true;start_range=.,144 NZ_CAJZAL010000126.1 Protein Homology CDS 144 704 . + 0 ID=cds-WP_435520935.1;Parent=gene-LDO38_RS11095;Dbxref=GenBank:WP_435520935.1;Name=WP_435520935.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484701.1;locus_tag=LDO38_RS11095;partial=true;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_435520935.1;start_range=.,144;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 895 1773 . + . ID=gene-LDO38_RS11100;Name=LDO38_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11100;old_locus_tag=BVI2075_260004 NZ_CAJZAL010000126.1 Protein Homology CDS 895 1773 . + 0 ID=cds-WP_011881982.1;Parent=gene-LDO38_RS11100;Dbxref=GenBank:WP_011881982.1;Name=WP_011881982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762245.1;locus_tag=LDO38_RS11100;product=helix-hairpin-helix domain-containing protein;protein_id=WP_011881982.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 1808 2233 . - . ID=gene-LDO38_RS11105;Name=LDO38_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11105;old_locus_tag=BVI2075_260005 NZ_CAJZAL010000126.1 Protein Homology CDS 1808 2233 . - 0 ID=cds-WP_011881981.1;Parent=gene-LDO38_RS11105;Dbxref=GenBank:WP_011881981.1;Name=WP_011881981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881981.1;locus_tag=LDO38_RS11105;product=helix-turn-helix domain-containing protein;protein_id=WP_011881981.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 2427 3941 . - . ID=gene-LDO38_RS11110;Name=LDO38_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11110;old_locus_tag=BVI2075_260007 NZ_CAJZAL010000126.1 Protein Homology CDS 2427 3941 . - 0 ID=cds-WP_011881980.1;Parent=gene-LDO38_RS11110;Dbxref=GenBank:WP_011881980.1;Name=WP_011881980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217176.1;locus_tag=LDO38_RS11110;product=acetyl-CoA hydrolase/transferase family protein;protein_id=WP_011881980.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 4587 5342 . + . ID=gene-LDO38_RS11115;Name=LDO38_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11115;old_locus_tag=BVI2075_260008 NZ_CAJZAL010000126.1 Protein Homology CDS 4587 5342 . + 0 ID=cds-WP_011881979.1;Parent=gene-LDO38_RS11115;Dbxref=GenBank:WP_011881979.1;Name=WP_011881979.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603979.1;locus_tag=LDO38_RS11115;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_011881979.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 5339 6148 . + . ID=gene-LDO38_RS11120;Name=LDO38_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11120;old_locus_tag=BVI2075_260009 NZ_CAJZAL010000126.1 Protein Homology CDS 5339 6148 . + 0 ID=cds-WP_069246514.1;Parent=gene-LDO38_RS11120;Dbxref=GenBank:WP_069246514.1;Name=WP_069246514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694707.1;locus_tag=LDO38_RS11120;product=HalD/BesD family halogenase;protein_id=WP_069246514.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 6145 7146 . + . ID=gene-LDO38_RS11125;Name=LDO38_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11125;old_locus_tag=BVI2075_260010 NZ_CAJZAL010000126.1 Protein Homology CDS 6145 7146 . + 0 ID=cds-WP_011881977.1;Parent=gene-LDO38_RS11125;Dbxref=GenBank:WP_011881977.1;Name=WP_011881977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399831.1;locus_tag=LDO38_RS11125;product=HpnL family protein;protein_id=WP_011881977.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 7182 7949 . + . ID=gene-LDO38_RS11130;Name=LDO38_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11130;old_locus_tag=BVI2075_260011 NZ_CAJZAL010000126.1 Protein Homology CDS 7182 7949 . + 0 ID=cds-WP_011881976.1;Parent=gene-LDO38_RS11130;Dbxref=GenBank:WP_011881976.1;Name=WP_011881976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603691.1;locus_tag=LDO38_RS11130;product=NTP transferase domain-containing protein;protein_id=WP_011881976.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 7946 9631 . + . ID=gene-LDO38_RS11135;Name=aepX;gbkey=Gene;gene=aepX;gene_biotype=protein_coding;locus_tag=LDO38_RS11135;old_locus_tag=BVI2075_260012 NZ_CAJZAL010000126.1 Protein Homology CDS 7946 9631 . + 0 ID=cds-WP_224056432.1;Parent=gene-LDO38_RS11135;Dbxref=GenBank:WP_224056432.1;Name=WP_224056432.1;Ontology_term=GO:0019634,GO:0050188;gbkey=CDS;gene=aepX;go_function=phosphoenolpyruvate mutase activity|0050188||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004542643.1;locus_tag=LDO38_RS11135;product=phosphoenolpyruvate mutase;protein_id=WP_224056432.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 9628 10809 . + . ID=gene-LDO38_RS11140;Name=aepY;gbkey=Gene;gene=aepY;gene_biotype=protein_coding;locus_tag=LDO38_RS11140;old_locus_tag=BVI2075_260013 NZ_CAJZAL010000126.1 Protein Homology CDS 9628 10809 . + 0 ID=cds-WP_069246515.1;Parent=gene-LDO38_RS11140;Dbxref=GenBank:WP_069246515.1;Name=WP_069246515.1;Ontology_term=GO:0032923,GO:0033980;gbkey=CDS;gene=aepY;go_function=phosphonopyruvate decarboxylase activity|0033980||IEA;go_process=organic phosphonate biosynthetic process|0032923||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760251.1;locus_tag=LDO38_RS11140;product=phosphonopyruvate decarboxylase;protein_id=WP_069246515.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 10809 11873 . + . ID=gene-LDO38_RS11145;Name=LDO38_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11145;old_locus_tag=BVI2075_260014 NZ_CAJZAL010000126.1 Protein Homology CDS 10809 11873 . + 0 ID=cds-WP_059475218.1;Parent=gene-LDO38_RS11145;Dbxref=GenBank:WP_059475218.1;Name=WP_059475218.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187270.1;locus_tag=LDO38_RS11145;product=2-aminoethylphosphonate aminotransferase;protein_id=WP_059475218.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 12007 12330 . + . ID=gene-LDO38_RS11150;Name=LDO38_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11150;old_locus_tag=BVI2075_260015 NZ_CAJZAL010000126.1 Protein Homology CDS 12007 12330 . + 0 ID=cds-WP_011881972.1;Parent=gene-LDO38_RS11150;Dbxref=GenBank:WP_011881972.1;Name=WP_011881972.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725081.1;locus_tag=LDO38_RS11150;product=ArsR/SmtB family transcription factor;protein_id=WP_011881972.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 12448 12945 . + . ID=gene-LDO38_RS11155;Name=LDO38_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11155;old_locus_tag=BVI2075_260016 NZ_CAJZAL010000126.1 Protein Homology CDS 12448 12945 . + 0 ID=cds-WP_011881971.1;Parent=gene-LDO38_RS11155;Dbxref=GenBank:WP_011881971.1;Name=WP_011881971.1;Ontology_term=GO:0046685,GO:0004725,GO:0030612;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA,arsenate reductase (thioredoxin) activity|0030612||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881971.1;locus_tag=LDO38_RS11155;product=arsenate reductase ArsC;protein_id=WP_011881971.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 12969 14039 . + . ID=gene-LDO38_RS11160;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=LDO38_RS11160;old_locus_tag=BVI2075_260017 NZ_CAJZAL010000126.1 Protein Homology CDS 12969 14039 . + 0 ID=cds-WP_011881970.1;Parent=gene-LDO38_RS11160;Dbxref=GenBank:WP_011881970.1;Name=WP_011881970.1;Ontology_term=GO:0015700,GO:0046685,GO:0008490,GO:0015103,GO:0015297,GO:0016020;gbkey=CDS;gene=arsB;go_component=membrane|0016020||IEA;go_function=arsenite secondary active transmembrane transporter activity|0008490||IEA,inorganic anion transmembrane transporter activity|0015103||IEA,antiporter activity|0015297||IEA;go_process=arsenite transport|0015700||IEA,response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881970.1;locus_tag=LDO38_RS11160;product=ACR3 family arsenite efflux transporter;protein_id=WP_011881970.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 14036 14200 . + . ID=gene-LDO38_RS11165;Name=LDO38_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11165;old_locus_tag=BVI2075_260018 NZ_CAJZAL010000126.1 GeneMarkS-2+ CDS 14036 14200 . + 0 ID=cds-WP_014725083.1;Parent=gene-LDO38_RS11165;Dbxref=GenBank:WP_014725083.1;Name=WP_014725083.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS11165;product=hypothetical protein;protein_id=WP_014725083.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 14184 15029 . + . ID=gene-LDO38_RS30175;Name=arsD;gbkey=Gene;gene=arsD;gene_biotype=protein_coding;locus_tag=LDO38_RS30175;old_locus_tag=BVI2075_260019 NZ_CAJZAL010000126.1 Protein Homology CDS 14184 15029 . + 0 ID=cds-WP_046427275.1;Parent=gene-LDO38_RS30175;Dbxref=GenBank:WP_046427275.1;Name=WP_046427275.1;Ontology_term=GO:0046685,GO:0003677;gbkey=CDS;gene=arsD;go_function=DNA binding|0003677||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881969.1;locus_tag=LDO38_RS30175;product=arsenite efflux transporter metallochaperone ArsD;protein_id=WP_046427275.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 15039 16802 . + . ID=gene-LDO38_RS11180;Name=arsA;gbkey=Gene;gene=arsA;gene_biotype=protein_coding;locus_tag=LDO38_RS11180;old_locus_tag=BVI2075_260020 NZ_CAJZAL010000126.1 Protein Homology CDS 15039 16802 . + 0 ID=cds-WP_224056433.1;Parent=gene-LDO38_RS11180;Dbxref=GenBank:WP_224056433.1;Name=WP_224056433.1;Ontology_term=GO:0071722,GO:0005524,GO:0015446,GO:0016887;gbkey=CDS;gene=arsA;go_function=ATP binding|0005524||IEA,ATPase-coupled arsenite transmembrane transporter activity|0015446||IEA,ATP hydrolysis activity|0016887||IEA;go_process=detoxification of arsenic-containing substance|0071722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725085.1;locus_tag=LDO38_RS11180;product=arsenical pump-driving ATPase;protein_id=WP_224056433.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 17139 17822 . - . ID=gene-LDO38_RS11185;Name=LDO38_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11185;old_locus_tag=BVI2075_260021 NZ_CAJZAL010000126.1 Protein Homology CDS 17139 17822 . - 0 ID=cds-WP_014725086.1;Parent=gene-LDO38_RS11185;Dbxref=GenBank:WP_014725086.1;Name=WP_014725086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725086.1;locus_tag=LDO38_RS11185;product=glutathione S-transferase;protein_id=WP_014725086.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 17959 18534 . + . ID=gene-LDO38_RS11190;Name=LDO38_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11190;old_locus_tag=BVI2075_260022 NZ_CAJZAL010000126.1 Protein Homology CDS 17959 18534 . + 0 ID=cds-WP_011881966.1;Parent=gene-LDO38_RS11190;Dbxref=GenBank:WP_011881966.1;Name=WP_011881966.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881966.1;locus_tag=LDO38_RS11190;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011881966.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 19056 19988 . + . ID=gene-LDO38_RS11195;Name=pip;gbkey=Gene;gene=pip;gene_biotype=protein_coding;locus_tag=LDO38_RS11195;old_locus_tag=BVI2075_260024 NZ_CAJZAL010000126.1 Protein Homology CDS 19056 19988 . + 0 ID=cds-WP_011881965.1;Parent=gene-LDO38_RS11195;Dbxref=GenBank:WP_011881965.1;Name=WP_011881965.1;Ontology_term=GO:0030163,GO:0004177,GO:0005737;gbkey=CDS;gene=pip;go_component=cytoplasm|0005737||IEA;go_function=aminopeptidase activity|0004177||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899657.1;locus_tag=LDO38_RS11195;product=prolyl aminopeptidase;protein_id=WP_011881965.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 20029 20301 . - . ID=gene-LDO38_RS11200;Name=LDO38_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11200;old_locus_tag=BVI2075_260025 NZ_CAJZAL010000126.1 Protein Homology CDS 20029 20301 . - 0 ID=cds-WP_011881964.1;Parent=gene-LDO38_RS11200;Dbxref=GenBank:WP_011881964.1;Name=WP_011881964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365826.1;locus_tag=LDO38_RS11200;product=hypothetical protein;protein_id=WP_011881964.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 20487 21578 . - . ID=gene-LDO38_RS11205;Name=LDO38_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11205;old_locus_tag=BVI2075_260026 NZ_CAJZAL010000126.1 Protein Homology CDS 20487 21578 . - 0 ID=cds-WP_011881963.1;Parent=gene-LDO38_RS11205;Dbxref=GenBank:WP_011881963.1;Name=WP_011881963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658548.1;locus_tag=LDO38_RS11205;product=transglutaminase family protein;protein_id=WP_011881963.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 21572 24175 . - . ID=gene-LDO38_RS11210;Name=LDO38_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11210;old_locus_tag=BVI2075_260027 NZ_CAJZAL010000126.1 Protein Homology CDS 21572 24175 . - 0 ID=cds-WP_045578446.1;Parent=gene-LDO38_RS11210;Dbxref=GenBank:WP_045578446.1;Name=WP_045578446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355530.1;locus_tag=LDO38_RS11210;product=circularly permuted type 2 ATP-grasp protein;protein_id=WP_045578446.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 24386 27814 . - . ID=gene-LDO38_RS11215;Name=LDO38_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11215;old_locus_tag=BVI2075_260028 NZ_CAJZAL010000126.1 Protein Homology CDS 24386 27814 . - 0 ID=cds-WP_069246516.1;Parent=gene-LDO38_RS11215;Dbxref=GenBank:WP_069246516.1;Name=WP_069246516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495081.1;locus_tag=LDO38_RS11215;product=DUF2126 domain-containing protein;protein_id=WP_069246516.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 27908 28882 . - . ID=gene-LDO38_RS11220;Name=LDO38_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11220;old_locus_tag=BVI2075_260029 NZ_CAJZAL010000126.1 Protein Homology CDS 27908 28882 . - 0 ID=cds-WP_011881960.1;Parent=gene-LDO38_RS11220;Dbxref=GenBank:WP_011881960.1;Name=WP_011881960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403405.1;locus_tag=LDO38_RS11220;product=transglutaminase family protein;protein_id=WP_011881960.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 28891 29832 . - . ID=gene-LDO38_RS11225;Name=LDO38_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11225;old_locus_tag=BVI2075_260030 NZ_CAJZAL010000126.1 Protein Homology CDS 28891 29832 . - 0 ID=cds-WP_059694840.1;Parent=gene-LDO38_RS11225;Dbxref=GenBank:WP_059694840.1;Name=WP_059694840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010108140.1;locus_tag=LDO38_RS11225;product=alpha-E domain-containing protein;protein_id=WP_059694840.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 29901 31316 . - . ID=gene-LDO38_RS11230;Name=LDO38_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11230;old_locus_tag=BVI2075_260031 NZ_CAJZAL010000126.1 Protein Homology CDS 29901 31316 . - 0 ID=cds-WP_011881958.1;Parent=gene-LDO38_RS11230;Dbxref=GenBank:WP_011881958.1;Name=WP_011881958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877418.1;locus_tag=LDO38_RS11230;product=circularly permuted type 2 ATP-grasp protein;protein_id=WP_011881958.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 31891 32883 . + . ID=gene-LDO38_RS11235;Name=LDO38_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11235;old_locus_tag=BVI2075_260032 NZ_CAJZAL010000126.1 Protein Homology CDS 31891 32883 . + 0 ID=cds-WP_034193833.1;Parent=gene-LDO38_RS11235;Dbxref=GenBank:WP_034193833.1;Name=WP_034193833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725091.1;locus_tag=LDO38_RS11235;product=LysR substrate-binding domain-containing protein;protein_id=WP_034193833.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 32826 33215 . - . ID=gene-LDO38_RS11240;Name=LDO38_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11240;old_locus_tag=BVI2075_260033 NZ_CAJZAL010000126.1 GeneMarkS-2+ CDS 32826 33215 . - 0 ID=cds-WP_124259927.1;Parent=gene-LDO38_RS11240;Dbxref=GenBank:WP_124259927.1;Name=WP_124259927.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS11240;product=hypothetical protein;protein_id=WP_124259927.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 33549 33980 . + . ID=gene-LDO38_RS11245;Name=LDO38_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11245;old_locus_tag=BVI2075_260034 NZ_CAJZAL010000126.1 Protein Homology CDS 33549 33980 . + 0 ID=cds-WP_034193832.1;Parent=gene-LDO38_RS11245;Dbxref=GenBank:WP_034193832.1;Name=WP_034193832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725092.1;locus_tag=LDO38_RS11245;product=hypothetical protein;protein_id=WP_034193832.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 34043 34807 . + . ID=gene-LDO38_RS11250;Name=LDO38_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11250;old_locus_tag=BVI2075_260035 NZ_CAJZAL010000126.1 Protein Homology CDS 34043 34807 . + 0 ID=cds-WP_045578114.1;Parent=gene-LDO38_RS11250;Dbxref=GenBank:WP_045578114.1;Name=WP_045578114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881954.1;locus_tag=LDO38_RS11250;product=hypothetical protein;protein_id=WP_045578114.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 34910 37801 . + . ID=gene-LDO38_RS11255;Name=pgaA;gbkey=Gene;gene=pgaA;gene_biotype=protein_coding;locus_tag=LDO38_RS11255;old_locus_tag=BVI2075_260036 NZ_CAJZAL010000126.1 Protein Homology CDS 34910 37801 . + 0 ID=cds-WP_224056434.1;Parent=gene-LDO38_RS11255;Dbxref=GenBank:WP_224056434.1;Name=WP_224056434.1;Ontology_term=GO:1901515,GO:0009279;gbkey=CDS;gene=pgaA;go_component=cell outer membrane|0009279||IEA;go_function=poly-beta-1%2C6-N-acetyl-D-glucosamine transmembrane transporter activity|1901515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725094.1;locus_tag=LDO38_RS11255;product=poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA;protein_id=WP_224056434.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 37817 39910 . + . ID=gene-LDO38_RS11260;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=LDO38_RS11260;old_locus_tag=BVI2075_260037 NZ_CAJZAL010000126.1 Protein Homology CDS 37817 39910 . + 0 ID=cds-WP_011881952.1;Parent=gene-LDO38_RS11260;Dbxref=GenBank:WP_011881952.1;Name=WP_011881952.1;Ontology_term=GO:0000271,GO:0019213;gbkey=CDS;gene=pgaB;go_function=deacetylase activity|0019213||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753607.1;locus_tag=LDO38_RS11260;product=poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB;protein_id=WP_011881952.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 39907 41178 . + . ID=gene-LDO38_RS11265;Name=pgaC;gbkey=Gene;gene=pgaC;gene_biotype=protein_coding;locus_tag=LDO38_RS11265;old_locus_tag=BVI2075_260038 NZ_CAJZAL010000126.1 Protein Homology CDS 39907 41178 . + 0 ID=cds-WP_011881951.1;Parent=gene-LDO38_RS11265;Dbxref=GenBank:WP_011881951.1;Name=WP_011881951.1;Ontology_term=GO:0042710,GO:0008375;gbkey=CDS;gene=pgaC;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=biofilm formation|0042710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217189.1;locus_tag=LDO38_RS11265;product=poly-beta-1%2C6-N-acetyl-D-glucosamine synthase;protein_id=WP_011881951.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 41156 41644 . + . ID=gene-LDO38_RS11270;Name=LDO38_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11270;old_locus_tag=BVI2075_260039 NZ_CAJZAL010000126.1 Protein Homology CDS 41156 41644 . + 0 ID=cds-WP_059734812.1;Parent=gene-LDO38_RS11270;Dbxref=GenBank:WP_059734812.1;Name=WP_059734812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899671.1;locus_tag=LDO38_RS11270;product=hypothetical protein;protein_id=WP_059734812.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 41736 43559 . + . ID=gene-LDO38_RS11275;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LDO38_RS11275;old_locus_tag=BVI2075_260040 NZ_CAJZAL010000126.1 Protein Homology CDS 41736 43559 . + 0 ID=cds-WP_069246518.1;Parent=gene-LDO38_RS11275;Dbxref=GenBank:WP_069246518.1;Name=WP_069246518.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759227.1;locus_tag=LDO38_RS11275;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_069246518.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 43559 44839 . + . ID=gene-LDO38_RS11280;Name=LDO38_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11280;old_locus_tag=BVI2075_260041 NZ_CAJZAL010000126.1 Protein Homology CDS 43559 44839 . + 0 ID=cds-WP_404842023.1;Parent=gene-LDO38_RS11280;Dbxref=GenBank:WP_404842023.1;Name=WP_404842023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725098.1;locus_tag=LDO38_RS11280;product=hypothetical protein;protein_id=WP_404842023.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 44886 44999 . - . ID=gene-LDO38_RS11285;Name=LDO38_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11285 NZ_CAJZAL010000126.1 GeneMarkS-2+ CDS 44886 44999 . - 0 ID=cds-WP_224056435.1;Parent=gene-LDO38_RS11285;Dbxref=GenBank:WP_224056435.1;Name=WP_224056435.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS11285;product=DUF3626 domain-containing protein;protein_id=WP_224056435.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 45325 46161 . + . ID=gene-LDO38_RS11290;Name=LDO38_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11290;old_locus_tag=BVI2075_260042 NZ_CAJZAL010000126.1 Protein Homology CDS 45325 46161 . + 0 ID=cds-WP_011881947.1;Parent=gene-LDO38_RS11290;Dbxref=GenBank:WP_011881947.1;Name=WP_011881947.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658533.1;locus_tag=LDO38_RS11290;product=c-type cytochrome;protein_id=WP_011881947.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq pseudogene 46171 46393 . - . ID=gene-LDO38_RS11295;Name=LDO38_RS11295;end_range=46393,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS11295;old_locus_tag=BVI2075_260043;partial=true;pseudo=true;start_range=.,46171 NZ_CAJZAL010000126.1 Protein Homology CDS 46171 46393 . - 0 ID=cds-LDO38_RS11295;Parent=gene-LDO38_RS11295;Note=allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar%3B the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia%3B carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids%2C ammonia%2C and carbon dioxide%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=46393,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658532.1;locus_tag=LDO38_RS11295;partial=true;product=Zn-dependent hydrolase;pseudo=true;start_range=.,46171;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 46505 46723 . + . ID=gene-LDO38_RS11300;Name=LDO38_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11300;old_locus_tag=BVI2075_260044 NZ_CAJZAL010000126.1 Protein Homology CDS 46505 46723 . + 0 ID=cds-WP_011881946.1;Parent=gene-LDO38_RS11300;Dbxref=GenBank:WP_011881946.1;Name=WP_011881946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881946.1;locus_tag=LDO38_RS11300;product=hypothetical protein;protein_id=WP_011881946.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 46887 47252 . + . ID=gene-LDO38_RS11305;Name=LDO38_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11305;old_locus_tag=BVI2075_260045 NZ_CAJZAL010000126.1 Protein Homology CDS 46887 47252 . + 0 ID=cds-WP_011881945.1;Parent=gene-LDO38_RS11305;Dbxref=GenBank:WP_011881945.1;Name=WP_011881945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725103.1;locus_tag=LDO38_RS11305;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_011881945.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 47808 48371 . + . ID=gene-LDO38_RS11310;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=LDO38_RS11310;old_locus_tag=BVI2075_260047 NZ_CAJZAL010000126.1 Protein Homology CDS 47808 48371 . + 0 ID=cds-WP_011881944.1;Parent=gene-LDO38_RS11310;Dbxref=GenBank:WP_011881944.1;Name=WP_011881944.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329783.1;locus_tag=LDO38_RS11310;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_011881944.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 48491 50089 . + . ID=gene-LDO38_RS11315;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=LDO38_RS11315;old_locus_tag=BVI2075_260048 NZ_CAJZAL010000126.1 Protein Homology CDS 48491 50089 . + 0 ID=cds-WP_011881943.1;Parent=gene-LDO38_RS11315;Dbxref=GenBank:WP_011881943.1;Name=WP_011881943.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403836.1;locus_tag=LDO38_RS11315;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_011881943.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 50202 51008 . - . ID=gene-LDO38_RS11320;Name=LDO38_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11320;old_locus_tag=BVI2075_260049 NZ_CAJZAL010000126.1 Protein Homology CDS 50202 51008 . - 0 ID=cds-WP_069240098.1;Parent=gene-LDO38_RS11320;Dbxref=GenBank:WP_069240098.1;Name=WP_069240098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881942.1;locus_tag=LDO38_RS11320;product=extensin;protein_id=WP_069240098.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 51176 52075 . - . ID=gene-LDO38_RS11325;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=LDO38_RS11325;old_locus_tag=BVI2075_260050 NZ_CAJZAL010000126.1 Protein Homology CDS 51176 52075 . - 0 ID=cds-WP_059461133.1;Parent=gene-LDO38_RS11325;Dbxref=GenBank:WP_059461133.1;Name=WP_059461133.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486222.1;locus_tag=LDO38_RS11325;product=lipid A hydroxylase LpxO;protein_id=WP_059461133.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 52285 52839 . - . ID=gene-LDO38_RS11330;Name=LDO38_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11330;old_locus_tag=BVI2075_260051 NZ_CAJZAL010000126.1 Protein Homology CDS 52285 52839 . - 0 ID=cds-WP_059455256.1;Parent=gene-LDO38_RS11330;Dbxref=GenBank:WP_059455256.1;Name=WP_059455256.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486233.1;locus_tag=LDO38_RS11330;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_059455256.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 52865 54199 . - . ID=gene-LDO38_RS11335;Name=LDO38_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11335;old_locus_tag=BVI2075_260052 NZ_CAJZAL010000126.1 Protein Homology CDS 52865 54199 . - 0 ID=cds-WP_059459889.1;Parent=gene-LDO38_RS11335;Dbxref=GenBank:WP_059459889.1;Name=WP_059459889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355554.1;locus_tag=LDO38_RS11335;product=aspartate aminotransferase family protein;protein_id=WP_059459889.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq pseudogene 54215 54493 . - . ID=gene-LDO38_RS11340;Name=LDO38_RS11340;end_range=54493,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS11340;old_locus_tag=BVI2075_260053;partial=true;pseudo=true NZ_CAJZAL010000126.1 Protein Homology CDS 54215 54493 . - 0 ID=cds-LDO38_RS11340;Parent=gene-LDO38_RS11340;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=54493,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547979.1;locus_tag=LDO38_RS11340;partial=true;product=peptidase C45;pseudo=true;transl_table=11 NZ_CAJZAL010000126.1 RefSeq pseudogene 54486 55028 . - . ID=gene-LDO38_RS11345;Name=LDO38_RS11345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS11345;old_locus_tag=BVI2075_260054;partial=true;pseudo=true;start_range=.,54486 NZ_CAJZAL010000126.1 Protein Homology CDS 54486 55028 . - 0 ID=cds-LDO38_RS11345;Parent=gene-LDO38_RS11345;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538020.1;locus_tag=LDO38_RS11345;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;start_range=.,54486;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 55025 55471 . - . ID=gene-LDO38_RS11350;Name=LDO38_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11350;old_locus_tag=BVI2075_260055 NZ_CAJZAL010000126.1 Protein Homology CDS 55025 55471 . - 0 ID=cds-WP_069246519.1;Parent=gene-LDO38_RS11350;Dbxref=GenBank:WP_069246519.1;Name=WP_069246519.1;Note=The N-terminal region of this protein%2C as described by TIGR01726%2C is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits%2C which specificities that include histidine%2C arginine%2C glutamine%2C glutamate%2C L-cystine (sic)%2C the opines (in Agrobacterium) octopine and nopaline%2C etc.;Ontology_term=GO:0015837,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028339.1;locus_tag=LDO38_RS11350;product=ABC transporter permease subunit;protein_id=WP_069246519.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq pseudogene 55539 56290 . - . ID=gene-LDO38_RS11355;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=pseudogene;locus_tag=LDO38_RS11355;old_locus_tag=BVI2075_260056;pseudo=true NZ_CAJZAL010000126.1 Protein Homology CDS 55539 56290 . - 0 ID=cds-LDO38_RS11355;Parent=gene-LDO38_RS11355;Note=frameshifted;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010097614.1;locus_tag=LDO38_RS11355;product=glutamine ABC transporter substrate-binding protein GlnH;pseudo=true;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 56939 57310 . - . ID=gene-LDO38_RS11360;Name=LDO38_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11360;old_locus_tag=BVI2075_260057 NZ_CAJZAL010000126.1 Protein Homology CDS 56939 57310 . - 0 ID=cds-WP_011881935.1;Parent=gene-LDO38_RS11360;Dbxref=GenBank:WP_011881935.1;Name=WP_011881935.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495095.1;locus_tag=LDO38_RS11360;product=MAPEG family protein;protein_id=WP_011881935.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 57616 58737 . + . ID=gene-LDO38_RS11365;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=LDO38_RS11365;old_locus_tag=BVI2075_260058 NZ_CAJZAL010000126.1 Protein Homology CDS 57616 58737 . + 0 ID=cds-WP_014725112.1;Parent=gene-LDO38_RS11365;Dbxref=GenBank:WP_014725112.1;Name=WP_014725112.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899697.1;locus_tag=LDO38_RS11365;product=alanine racemase;protein_id=WP_014725112.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 58891 59685 . - . ID=gene-LDO38_RS11370;Name=LDO38_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11370;old_locus_tag=BVI2075_260059 NZ_CAJZAL010000126.1 Protein Homology CDS 58891 59685 . - 0 ID=cds-WP_085954508.1;Parent=gene-LDO38_RS11370;Dbxref=GenBank:WP_085954508.1;Name=WP_085954508.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899698.1;locus_tag=LDO38_RS11370;product=enoyl-CoA hydratase;protein_id=WP_085954508.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 59760 60125 . - . ID=gene-LDO38_RS11375;Name=LDO38_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11375;old_locus_tag=BVI2075_260060 NZ_CAJZAL010000126.1 Protein Homology CDS 59760 60125 . - 0 ID=cds-WP_006765703.1;Parent=gene-LDO38_RS11375;Dbxref=GenBank:WP_006765703.1;Name=WP_006765703.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759394.1;locus_tag=LDO38_RS11375;product=response regulator;protein_id=WP_006765703.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 60164 61123 . - . ID=gene-LDO38_RS11380;Name=LDO38_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11380;old_locus_tag=BVI2075_260061 NZ_CAJZAL010000126.1 Protein Homology CDS 60164 61123 . - 0 ID=cds-WP_014725114.1;Parent=gene-LDO38_RS11380;Dbxref=GenBank:WP_014725114.1;Name=WP_014725114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495102.1;locus_tag=LDO38_RS11380;product=chemotaxis protein CheX;protein_id=WP_014725114.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 61146 61730 . - . ID=gene-LDO38_RS11385;Name=LDO38_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11385;old_locus_tag=BVI2075_260062 NZ_CAJZAL010000126.1 Protein Homology CDS 61146 61730 . - 0 ID=cds-WP_011881930.1;Parent=gene-LDO38_RS11385;Dbxref=GenBank:WP_011881930.1;Name=WP_011881930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495103.1;locus_tag=LDO38_RS11385;product=hypothetical protein;protein_id=WP_011881930.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 61727 62467 . - . ID=gene-LDO38_RS11390;Name=LDO38_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11390;old_locus_tag=BVI2075_260063 NZ_CAJZAL010000126.1 Protein Homology CDS 61727 62467 . - 0 ID=cds-WP_011881929.1;Parent=gene-LDO38_RS11390;Dbxref=GenBank:WP_011881929.1;Name=WP_011881929.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658488.1;locus_tag=LDO38_RS11390;product=methyl-accepting chemotaxis protein;protein_id=WP_011881929.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 62470 64860 . - . ID=gene-LDO38_RS11395;Name=LDO38_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11395;old_locus_tag=BVI2075_260064 NZ_CAJZAL010000126.1 Protein Homology CDS 62470 64860 . - 0 ID=cds-WP_069246521.1;Parent=gene-LDO38_RS11395;Dbxref=GenBank:WP_069246521.1;Name=WP_069246521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750135.1;locus_tag=LDO38_RS11395;product=MCP four helix bundle domain-containing protein;protein_id=WP_069246521.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 65048 65332 . + . ID=gene-LDO38_RS11400;Name=LDO38_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11400;old_locus_tag=BVI2075_260066 NZ_CAJZAL010000126.1 GeneMarkS-2+ CDS 65048 65332 . + 0 ID=cds-WP_124259929.1;Parent=gene-LDO38_RS11400;Dbxref=GenBank:WP_124259929.1;Name=WP_124259929.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS11400;product=hypothetical protein;protein_id=WP_124259929.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 65366 66055 . + . ID=gene-LDO38_RS11405;Name=LDO38_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11405;old_locus_tag=BVI2075_260067 NZ_CAJZAL010000126.1 Protein Homology CDS 65366 66055 . + 0 ID=cds-WP_046427308.1;Parent=gene-LDO38_RS11405;Dbxref=GenBank:WP_046427308.1;Name=WP_046427308.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410151.1;locus_tag=LDO38_RS11405;product=alpha/beta hydrolase;protein_id=WP_046427308.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 66099 67610 . - . ID=gene-LDO38_RS11410;Name=LDO38_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11410;old_locus_tag=BVI2075_260068 NZ_CAJZAL010000126.1 Protein Homology CDS 66099 67610 . - 0 ID=cds-WP_034193810.1;Parent=gene-LDO38_RS11410;Dbxref=GenBank:WP_034193810.1;Name=WP_034193810.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658483.1;locus_tag=LDO38_RS11410;product=amino acid permease;protein_id=WP_034193810.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 67710 69116 . - . ID=gene-LDO38_RS11415;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=LDO38_RS11415;old_locus_tag=BVI2075_260069 NZ_CAJZAL010000126.1 Protein Homology CDS 67710 69116 . - 0 ID=cds-WP_011881925.1;Parent=gene-LDO38_RS11415;Dbxref=GenBank:WP_011881925.1;Name=WP_011881925.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750132.1;locus_tag=LDO38_RS11415;product=aspartate ammonia-lyase;protein_id=WP_011881925.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 69268 70242 . + . ID=gene-LDO38_RS11420;Name=LDO38_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11420;old_locus_tag=BVI2075_260070 NZ_CAJZAL010000126.1 Protein Homology CDS 69268 70242 . + 0 ID=cds-WP_011881924.1;Parent=gene-LDO38_RS11420;Dbxref=GenBank:WP_011881924.1;Name=WP_011881924.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338402.1;locus_tag=LDO38_RS11420;product=LysR family transcriptional regulator;protein_id=WP_011881924.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 70402 71466 . - . ID=gene-LDO38_RS11425;Name=LDO38_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11425;old_locus_tag=BVI2075_260071 NZ_CAJZAL010000126.1 Protein Homology CDS 70402 71466 . - 0 ID=cds-WP_069246522.1;Parent=gene-LDO38_RS11425;Dbxref=GenBank:WP_069246522.1;Name=WP_069246522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759441.1;locus_tag=LDO38_RS11425;product=asparaginase;protein_id=WP_069246522.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 71793 74045 . + . ID=gene-LDO38_RS11430;Name=LDO38_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11430;old_locus_tag=BVI2075_260073 NZ_CAJZAL010000126.1 Protein Homology CDS 71793 74045 . + 0 ID=cds-WP_069246523.1;Parent=gene-LDO38_RS11430;Dbxref=GenBank:WP_069246523.1;Name=WP_069246523.1;Ontology_term=GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689336.1;locus_tag=LDO38_RS11430;product=TonB-dependent receptor;protein_id=WP_069246523.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 74115 75137 . - . ID=gene-LDO38_RS11435;Name=LDO38_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11435;old_locus_tag=BVI2075_260074 NZ_CAJZAL010000126.1 Protein Homology CDS 74115 75137 . - 0 ID=cds-WP_060044418.1;Parent=gene-LDO38_RS11435;Dbxref=GenBank:WP_060044418.1;Name=WP_060044418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491312.1;locus_tag=LDO38_RS11435;product=DUF2891 domain-containing protein;protein_id=WP_060044418.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 75147 76097 . - . ID=gene-LDO38_RS11440;Name=LDO38_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11440;old_locus_tag=BVI2075_260075 NZ_CAJZAL010000126.1 Protein Homology CDS 75147 76097 . - 0 ID=cds-WP_059461140.1;Parent=gene-LDO38_RS11440;Dbxref=GenBank:WP_059461140.1;Name=WP_059461140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399760.1;locus_tag=LDO38_RS11440;product=DUF979 domain-containing protein;protein_id=WP_059461140.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 76094 76783 . - . ID=gene-LDO38_RS11445;Name=LDO38_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11445;old_locus_tag=BVI2075_260076 NZ_CAJZAL010000126.1 Protein Homology CDS 76094 76783 . - 0 ID=cds-WP_059461141.1;Parent=gene-LDO38_RS11445;Dbxref=GenBank:WP_059461141.1;Name=WP_059461141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658477.1;locus_tag=LDO38_RS11445;product=DUF969 domain-containing protein;protein_id=WP_059461141.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 77273 77497 . + . ID=gene-LDO38_RS11450;Name=LDO38_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11450;old_locus_tag=BVI2075_260077 NZ_CAJZAL010000126.1 Protein Homology CDS 77273 77497 . + 0 ID=cds-WP_006399758.1;Parent=gene-LDO38_RS11450;Dbxref=GenBank:WP_006399758.1;Name=WP_006399758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759437.1;locus_tag=LDO38_RS11450;product=hypothetical protein;protein_id=WP_006399758.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 77780 78904 . + . ID=gene-LDO38_RS11455;Name=LDO38_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11455;old_locus_tag=BVI2075_260078 NZ_CAJZAL010000126.1 Protein Homology CDS 77780 78904 . + 0 ID=cds-WP_069246524.1;Parent=gene-LDO38_RS11455;Dbxref=GenBank:WP_069246524.1;Name=WP_069246524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881918.1;locus_tag=LDO38_RS11455;product=diguanylate cyclase domain-containing protein;protein_id=WP_069246524.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 78894 81143 . - . ID=gene-LDO38_RS11460;Name=LDO38_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11460;old_locus_tag=BVI2075_260079 NZ_CAJZAL010000126.1 Protein Homology CDS 78894 81143 . - 0 ID=cds-WP_011881917.1;Parent=gene-LDO38_RS11460;Dbxref=GenBank:WP_011881917.1;Name=WP_011881917.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487684.1;locus_tag=LDO38_RS11460;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_011881917.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 81478 82437 . - . ID=gene-LDO38_RS11465;Name=LDO38_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11465;old_locus_tag=BVI2075_260080 NZ_CAJZAL010000126.1 Protein Homology CDS 81478 82437 . - 0 ID=cds-WP_069246525.1;Parent=gene-LDO38_RS11465;Dbxref=GenBank:WP_069246525.1;Name=WP_069246525.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881916.1;locus_tag=LDO38_RS11465;product=LysR family transcriptional regulator;protein_id=WP_069246525.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 82602 83921 . + . ID=gene-LDO38_RS11470;Name=LDO38_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11470;old_locus_tag=BVI2075_260081 NZ_CAJZAL010000126.1 Protein Homology CDS 82602 83921 . + 0 ID=cds-WP_045578133.1;Parent=gene-LDO38_RS11470;Dbxref=GenBank:WP_045578133.1;Name=WP_045578133.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479247.1;locus_tag=LDO38_RS11470;product=MFS transporter;protein_id=WP_045578133.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 84049 85575 . + . ID=gene-LDO38_RS11475;Name=LDO38_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11475;old_locus_tag=BVI2075_260082 NZ_CAJZAL010000126.1 Protein Homology CDS 84049 85575 . + 0 ID=cds-WP_224056436.1;Parent=gene-LDO38_RS11475;Dbxref=GenBank:WP_224056436.1;Name=WP_224056436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658468.1;locus_tag=LDO38_RS11475;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_224056436.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 85590 86480 . + . ID=gene-LDO38_RS11480;Name=mmsB;gbkey=Gene;gene=mmsB;gene_biotype=protein_coding;locus_tag=LDO38_RS11480;old_locus_tag=BVI2075_260083 NZ_CAJZAL010000126.1 Protein Homology CDS 85590 86480 . + 0 ID=cds-WP_059668713.1;Parent=gene-LDO38_RS11480;Dbxref=GenBank:WP_059668713.1;Name=WP_059668713.1;Ontology_term=GO:0006574,GO:0008442,GO:0051287;gbkey=CDS;gene=mmsB;go_function=3-hydroxyisobutyrate dehydrogenase activity|0008442||IEA,NAD binding|0051287||IEA;go_process=L-valine catabolic process|0006574||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899744.1;locus_tag=LDO38_RS11480;product=3-hydroxyisobutyrate dehydrogenase;protein_id=WP_059668713.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 86587 86919 . - . ID=gene-LDO38_RS11485;Name=LDO38_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11485;old_locus_tag=BVI2075_260084 NZ_CAJZAL010000126.1 Protein Homology CDS 86587 86919 . - 0 ID=cds-WP_034193802.1;Parent=gene-LDO38_RS11485;Dbxref=GenBank:WP_034193802.1;Name=WP_034193802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355632.1;locus_tag=LDO38_RS11485;product=hypothetical protein;protein_id=WP_034193802.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 87799 88563 . + . ID=gene-LDO38_RS11490;Name=LDO38_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11490;old_locus_tag=BVI2075_260086 NZ_CAJZAL010000126.1 Protein Homology CDS 87799 88563 . + 0 ID=cds-WP_011881909.1;Parent=gene-LDO38_RS11490;Dbxref=GenBank:WP_011881909.1;Name=WP_011881909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754364.1;locus_tag=LDO38_RS11490;product=DUF4397 domain-containing protein;protein_id=WP_011881909.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 88615 89175 . - . ID=gene-LDO38_RS11495;Name=LDO38_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11495;old_locus_tag=BVI2075_260087 NZ_CAJZAL010000126.1 Protein Homology CDS 88615 89175 . - 0 ID=cds-WP_224056437.1;Parent=gene-LDO38_RS11495;Dbxref=GenBank:WP_224056437.1;Name=WP_224056437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881908.1;locus_tag=LDO38_RS11495;product=DUF3005 domain-containing protein;protein_id=WP_224056437.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 89427 89717 . - . ID=gene-LDO38_RS11500;Name=LDO38_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11500;old_locus_tag=BVI2075_260088 NZ_CAJZAL010000126.1 Protein Homology CDS 89427 89717 . - 0 ID=cds-WP_050781904.1;Parent=gene-LDO38_RS11500;Dbxref=GenBank:WP_050781904.1;Name=WP_050781904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762278.1;locus_tag=LDO38_RS11500;product=hypothetical protein;protein_id=WP_050781904.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq pseudogene 90253 91418 . + . ID=gene-LDO38_RS11505;Name=LDO38_RS11505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS11505;old_locus_tag=BVI2075_260089;pseudo=true NZ_CAJZAL010000126.1 Protein Homology CDS 90253 91418 . + 0 ID=cds-LDO38_RS11505;Parent=gene-LDO38_RS11505;Note=frameshifted;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725135.1;locus_tag=LDO38_RS11505;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 91808 93382 . - . ID=gene-LDO38_RS11510;Name=LDO38_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11510;old_locus_tag=BVI2075_260090 NZ_CAJZAL010000126.1 Protein Homology CDS 91808 93382 . - 0 ID=cds-WP_011881906.1;Parent=gene-LDO38_RS11510;Dbxref=GenBank:WP_011881906.1;Name=WP_011881906.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881906.1;locus_tag=LDO38_RS11510;product=MFS transporter;protein_id=WP_011881906.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 93483 94361 . + . ID=gene-LDO38_RS11515;Name=LDO38_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11515;old_locus_tag=BVI2075_260091 NZ_CAJZAL010000126.1 Protein Homology CDS 93483 94361 . + 0 ID=cds-WP_014725138.1;Parent=gene-LDO38_RS11515;Dbxref=GenBank:WP_014725138.1;Name=WP_014725138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495905.1;locus_tag=LDO38_RS11515;product=LysR family transcriptional regulator;protein_id=WP_014725138.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 94513 95502 . + . ID=gene-LDO38_RS11520;Name=LDO38_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11520;old_locus_tag=BVI2075_260092 NZ_CAJZAL010000126.1 Protein Homology CDS 94513 95502 . + 0 ID=cds-WP_059567693.1;Parent=gene-LDO38_RS11520;Dbxref=GenBank:WP_059567693.1;Name=WP_059567693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881904.1;locus_tag=LDO38_RS11520;product=ABC transporter substrate-binding protein;protein_id=WP_059567693.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 95519 95893 . - . ID=gene-LDO38_RS11525;Name=LDO38_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11525;old_locus_tag=BVI2075_260093 NZ_CAJZAL010000126.1 Protein Homology CDS 95519 95893 . - 0 ID=cds-WP_069240077.1;Parent=gene-LDO38_RS11525;Dbxref=GenBank:WP_069240077.1;Name=WP_069240077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217250.1;locus_tag=LDO38_RS11525;product=phage protein NinX family protein;protein_id=WP_069240077.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 96156 97232 . + . ID=gene-LDO38_RS11530;Name=LDO38_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11530;old_locus_tag=BVI2075_260094 NZ_CAJZAL010000126.1 Protein Homology CDS 96156 97232 . + 0 ID=cds-WP_059459908.1;Parent=gene-LDO38_RS11530;Dbxref=GenBank:WP_059459908.1;Name=WP_059459908.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760803.1;locus_tag=LDO38_RS11530;product=glycosyltransferase family 2 protein;protein_id=WP_059459908.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 97249 97979 . + . ID=gene-LDO38_RS11535;Name=LDO38_RS11535;end_range=97979,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11535;old_locus_tag=BVI2075_260095;partial=true NZ_CAJZAL010000126.1 Protein Homology CDS 97249 97979 . + 0 ID=cds-WP_435520937.1;Parent=gene-LDO38_RS11535;Dbxref=GenBank:WP_435520937.1;Name=WP_435520937.1;Ontology_term=GO:0016757;end_range=97979,.;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338435.1;locus_tag=LDO38_RS11535;partial=true;product=glycosyltransferase family 87 protein;protein_id=WP_435520937.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq pseudogene 97990 98302 . + . ID=gene-LDO38_RS30520;Name=LDO38_RS30520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30520;old_locus_tag=BVI2075_260096;partial=true;pseudo=true;start_range=.,97990 NZ_CAJZAL010000126.1 Protein Homology CDS 97990 98302 . + 1 ID=cds-LDO38_RS30520;Parent=gene-LDO38_RS30520;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755602.1;locus_tag=LDO38_RS30520;partial=true;product=hypothetical protein;pseudo=true;start_range=.,97990;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 98504 98683 . - . ID=gene-LDO38_RS11540;Name=LDO38_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11540;old_locus_tag=BVI2075_260097 NZ_CAJZAL010000126.1 Protein Homology CDS 98504 98683 . - 0 ID=cds-WP_011881902.1;Parent=gene-LDO38_RS11540;Dbxref=GenBank:WP_011881902.1;Name=WP_011881902.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881902.1;locus_tag=LDO38_RS11540;product=Flp family type IVb pilin;protein_id=WP_011881902.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 99317 99724 . + . ID=gene-LDO38_RS11545;Name=LDO38_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11545;old_locus_tag=BVI2075_260098 NZ_CAJZAL010000126.1 Protein Homology CDS 99317 99724 . + 0 ID=cds-WP_045578138.1;Parent=gene-LDO38_RS11545;Dbxref=GenBank:WP_045578138.1;Name=WP_045578138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758237.1;locus_tag=LDO38_RS11545;product=DUF427 domain-containing protein;protein_id=WP_045578138.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 99919 100911 . + . ID=gene-LDO38_RS11550;Name=LDO38_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11550;old_locus_tag=BVI2075_260099 NZ_CAJZAL010000126.1 Protein Homology CDS 99919 100911 . + 0 ID=cds-WP_069246526.1;Parent=gene-LDO38_RS11550;Dbxref=GenBank:WP_069246526.1;Name=WP_069246526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881900.1;locus_tag=LDO38_RS11550;product=sulfonate ABC transporter substrate-binding protein;protein_id=WP_069246526.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 100930 101517 . - . ID=gene-LDO38_RS11555;Name=LDO38_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11555;old_locus_tag=BVI2075_260100 NZ_CAJZAL010000126.1 Protein Homology CDS 100930 101517 . - 0 ID=cds-WP_069240606.1;Parent=gene-LDO38_RS11555;Dbxref=GenBank:WP_069240606.1;Name=WP_069240606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725144.1;locus_tag=LDO38_RS11555;product=putative glycolipid-binding domain-containing protein;protein_id=WP_069240606.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 101553 102710 . - . ID=gene-LDO38_RS11560;Name=LDO38_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11560;old_locus_tag=BVI2075_260101 NZ_CAJZAL010000126.1 Protein Homology CDS 101553 102710 . - 0 ID=cds-WP_011881898.1;Parent=gene-LDO38_RS11560;Dbxref=GenBank:WP_011881898.1;Name=WP_011881898.1;Ontology_term=GO:0030554,GO:0046872;gbkey=CDS;go_function=adenyl nucleotide binding|0030554||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725145.1;locus_tag=LDO38_RS11560;product=iron-containing alcohol dehydrogenase;protein_id=WP_011881898.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 102707 103042 . - . ID=gene-LDO38_RS11565;Name=LDO38_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11565;old_locus_tag=BVI2075_260102 NZ_CAJZAL010000126.1 Protein Homology CDS 102707 103042 . - 0 ID=cds-WP_011881897.1;Parent=gene-LDO38_RS11565;Dbxref=GenBank:WP_011881897.1;Name=WP_011881897.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658438.1;locus_tag=LDO38_RS11565;product=putative quinol monooxygenase;protein_id=WP_011881897.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 103151 103867 . - . ID=gene-LDO38_RS11570;Name=LDO38_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11570;old_locus_tag=BVI2075_260103 NZ_CAJZAL010000126.1 Protein Homology CDS 103151 103867 . - 0 ID=cds-WP_011881896.1;Parent=gene-LDO38_RS11570;Dbxref=GenBank:WP_011881896.1;Name=WP_011881896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758232.1;locus_tag=LDO38_RS11570;product=SDR family oxidoreductase;protein_id=WP_011881896.1;transl_table=11 NZ_CAJZAL010000126.1 RefSeq gene 104000 104193 . + . ID=gene-LDO38_RS11575;Name=LDO38_RS11575;end_range=104193,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11575;partial=true NZ_CAJZAL010000126.1 Protein Homology CDS 104000 104193 . + 0 ID=cds-WP_224056440.1;Parent=gene-LDO38_RS11575;Dbxref=GenBank:WP_224056440.1;Name=WP_224056440.1;Ontology_term=GO:0006355,GO:0003700;end_range=104193,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488825.1;locus_tag=LDO38_RS11575;partial=true;product=LysR family transcriptional regulator;protein_id=WP_224056440.1;transl_table=11 ##sequence-region NZ_CAJZAL010000127.1 1 69956 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000127.1 RefSeq region 1 69956 . + . ID=NZ_CAJZAL010000127.1:1..69956;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_27 NZ_CAJZAL010000127.1 RefSeq pseudogene 1 214 . - . ID=gene-LDO38_RS11580;Name=LDO38_RS11580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS11580;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000127.1 Protein Homology CDS 1 214 . - 0 ID=cds-LDO38_RS11580;Parent=gene-LDO38_RS11580;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882665.1;locus_tag=LDO38_RS11580;partial=true;product=multidrug transporter;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 262 3348 . - . ID=gene-LDO38_RS11585;Name=LDO38_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11585;old_locus_tag=BVI2075_270002 NZ_CAJZAL010000127.1 Protein Homology CDS 262 3348 . - 0 ID=cds-WP_224056441.1;Parent=gene-LDO38_RS11585;Dbxref=GenBank:WP_224056441.1;Name=WP_224056441.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882666.1;locus_tag=LDO38_RS11585;product=efflux RND transporter permease subunit;protein_id=WP_224056441.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 3345 4448 . - . ID=gene-LDO38_RS11590;Name=LDO38_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11590;old_locus_tag=BVI2075_270003 NZ_CAJZAL010000127.1 Protein Homology CDS 3345 4448 . - 0 ID=cds-WP_080957801.1;Parent=gene-LDO38_RS11590;Dbxref=GenBank:WP_080957801.1;Name=WP_080957801.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733013.1;locus_tag=LDO38_RS11590;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_080957801.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 4608 5042 . - . ID=gene-LDO38_RS11595;Name=LDO38_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11595;old_locus_tag=BVI2075_270005 NZ_CAJZAL010000127.1 Protein Homology CDS 4608 5042 . - 0 ID=cds-WP_011882668.1;Parent=gene-LDO38_RS11595;Dbxref=GenBank:WP_011882668.1;Name=WP_011882668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725448.1;locus_tag=LDO38_RS11595;product=hypothetical protein;protein_id=WP_011882668.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 5039 6229 . - . ID=gene-LDO38_RS11600;Name=LDO38_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11600;old_locus_tag=BVI2075_270006 NZ_CAJZAL010000127.1 Protein Homology CDS 5039 6229 . - 0 ID=cds-WP_014725449.1;Parent=gene-LDO38_RS11600;Dbxref=GenBank:WP_014725449.1;Name=WP_014725449.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725449.1;locus_tag=LDO38_RS11600;product=multidrug effflux MFS transporter;protein_id=WP_014725449.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 6287 6913 . - . ID=gene-LDO38_RS11605;Name=LDO38_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11605;old_locus_tag=BVI2075_270007 NZ_CAJZAL010000127.1 Protein Homology CDS 6287 6913 . - 0 ID=cds-WP_034194523.1;Parent=gene-LDO38_RS11605;Dbxref=GenBank:WP_034194523.1;Name=WP_034194523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733010.1;locus_tag=LDO38_RS11605;product=thermostable hemolysin;protein_id=WP_034194523.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 6928 8403 . - . ID=gene-LDO38_RS11610;Name=LDO38_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11610;old_locus_tag=BVI2075_270008 NZ_CAJZAL010000127.1 Protein Homology CDS 6928 8403 . - 0 ID=cds-WP_014725451.1;Parent=gene-LDO38_RS11610;Dbxref=GenBank:WP_014725451.1;Name=WP_014725451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882671.1;locus_tag=LDO38_RS11610;product=AMP-binding protein;protein_id=WP_014725451.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 8400 9329 . - . ID=gene-LDO38_RS11615;Name=LDO38_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11615;old_locus_tag=BVI2075_270009 NZ_CAJZAL010000127.1 Protein Homology CDS 8400 9329 . - 0 ID=cds-WP_059457187.1;Parent=gene-LDO38_RS11615;Dbxref=GenBank:WP_059457187.1;Name=WP_059457187.1;Ontology_term=GO:0051213;gbkey=CDS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733008.1;locus_tag=LDO38_RS11615;product=TauD/TfdA family dioxygenase;protein_id=WP_059457187.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 9533 10489 . - . ID=gene-LDO38_RS11620;Name=LDO38_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11620;old_locus_tag=BVI2075_270013 NZ_CAJZAL010000127.1 Protein Homology CDS 9533 10489 . - 0 ID=cds-WP_014725453.1;Parent=gene-LDO38_RS11620;Dbxref=GenBank:WP_014725453.1;Name=WP_014725453.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423252.1;locus_tag=LDO38_RS11620;product=LysR family transcriptional regulator;protein_id=WP_014725453.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 10568 11119 . - . ID=gene-LDO38_RS11625;Name=LDO38_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11625;old_locus_tag=BVI2075_270015 NZ_CAJZAL010000127.1 Protein Homology CDS 10568 11119 . - 0 ID=cds-WP_059462427.1;Parent=gene-LDO38_RS11625;Dbxref=GenBank:WP_059462427.1;Name=WP_059462427.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725454.1;locus_tag=LDO38_RS11625;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_059462427.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 11227 12036 . + . ID=gene-LDO38_RS11630;Name=LDO38_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11630;old_locus_tag=BVI2075_270016 NZ_CAJZAL010000127.1 Protein Homology CDS 11227 12036 . + 0 ID=cds-WP_059457189.1;Parent=gene-LDO38_RS11630;Dbxref=GenBank:WP_059457189.1;Name=WP_059457189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882675.1;locus_tag=LDO38_RS11630;product=alpha/beta fold hydrolase;protein_id=WP_059457189.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 12518 12697 . - . ID=gene-LDO38_RS11635;Name=LDO38_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11635;old_locus_tag=BVI2075_270017 NZ_CAJZAL010000127.1 GeneMarkS-2+ CDS 12518 12697 . - 0 ID=cds-WP_146230260.1;Parent=gene-LDO38_RS11635;Dbxref=GenBank:WP_146230260.1;Name=WP_146230260.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS11635;product=hypothetical protein;protein_id=WP_146230260.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 12937 13164 . + . ID=gene-LDO38_RS11640;Name=LDO38_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11640;old_locus_tag=BVI2075_270018 NZ_CAJZAL010000127.1 Protein Homology CDS 12937 13164 . + 0 ID=cds-WP_014725472.1;Parent=gene-LDO38_RS11640;Dbxref=GenBank:WP_014725472.1;Name=WP_014725472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725472.1;locus_tag=LDO38_RS11640;product=DUF2945 domain-containing protein;protein_id=WP_014725472.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 13161 13736 . + . ID=gene-LDO38_RS11645;Name=LDO38_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11645;old_locus_tag=BVI2075_270019 NZ_CAJZAL010000127.1 Protein Homology CDS 13161 13736 . + 0 ID=cds-WP_014725473.1;Parent=gene-LDO38_RS11645;Dbxref=GenBank:WP_014725473.1;Name=WP_014725473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548547.1;locus_tag=LDO38_RS11645;product=DUF488 domain-containing protein;protein_id=WP_014725473.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 13986 14723 . + . ID=gene-LDO38_RS11650;Name=LDO38_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11650;old_locus_tag=BVI2075_270021 NZ_CAJZAL010000127.1 Protein Homology CDS 13986 14723 . + 0 ID=cds-WP_011548548.1;Parent=gene-LDO38_RS11650;Dbxref=GenBank:WP_011548548.1;Name=WP_011548548.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490854.1;locus_tag=LDO38_RS11650;product=sulfite exporter TauE/SafE family protein;protein_id=WP_011548548.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 14930 15508 . - . ID=gene-LDO38_RS11655;Name=LDO38_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11655;old_locus_tag=BVI2075_270023 NZ_CAJZAL010000127.1 Protein Homology CDS 14930 15508 . - 0 ID=cds-WP_046422963.1;Parent=gene-LDO38_RS11655;Dbxref=GenBank:WP_046422963.1;Name=WP_046422963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354393.1;locus_tag=LDO38_RS11655;product=NnrU family protein;protein_id=WP_046422963.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 15892 16389 . - . ID=gene-LDO38_RS11660;Name=LDO38_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11660;old_locus_tag=BVI2075_270024 NZ_CAJZAL010000127.1 Protein Homology CDS 15892 16389 . - 0 ID=cds-WP_212151823.1;Parent=gene-LDO38_RS11660;Dbxref=GenBank:WP_212151823.1;Name=WP_212151823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882696.1;locus_tag=LDO38_RS11660;product=TfoX/Sxy family protein;protein_id=WP_212151823.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 16415 17524 . - . ID=gene-LDO38_RS11665;Name=LDO38_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11665;old_locus_tag=BVI2075_270025 NZ_CAJZAL010000127.1 Protein Homology CDS 16415 17524 . - 0 ID=cds-WP_224056443.1;Parent=gene-LDO38_RS11665;Dbxref=GenBank:WP_224056443.1;Name=WP_224056443.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547244.1;locus_tag=LDO38_RS11665;product=malate/lactate/ureidoglycolate dehydrogenase;protein_id=WP_224056443.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 17580 19034 . - . ID=gene-LDO38_RS11670;Name=LDO38_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11670;old_locus_tag=BVI2075_270027 NZ_CAJZAL010000127.1 Protein Homology CDS 17580 19034 . - 0 ID=cds-WP_059562019.1;Parent=gene-LDO38_RS11670;Dbxref=GenBank:WP_059562019.1;Name=WP_059562019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757485.1;locus_tag=LDO38_RS11670;product=M20 family metallopeptidase;protein_id=WP_059562019.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 19392 19640 . - . ID=gene-LDO38_RS11675;Name=LDO38_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11675 NZ_CAJZAL010000127.1 GeneMarkS-2+ CDS 19392 19640 . - 0 ID=cds-WP_162471376.1;Parent=gene-LDO38_RS11675;Dbxref=GenBank:WP_162471376.1;Name=WP_162471376.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS11675;product=hypothetical protein;protein_id=WP_162471376.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 19534 21060 . + . ID=gene-LDO38_RS11680;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=LDO38_RS11680;old_locus_tag=BVI2075_270028 NZ_CAJZAL010000127.1 Protein Homology CDS 19534 21060 . + 0 ID=cds-WP_034195435.1;Parent=gene-LDO38_RS11680;Dbxref=GenBank:WP_034195435.1;Name=WP_034195435.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366594.1;locus_tag=LDO38_RS11680;product=arginine/agmatine antiporter;protein_id=WP_034195435.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 21064 23403 . + . ID=gene-LDO38_RS11685;Name=LDO38_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11685;old_locus_tag=BVI2075_270029 NZ_CAJZAL010000127.1 Protein Homology CDS 21064 23403 . + 0 ID=cds-WP_014725479.1;Parent=gene-LDO38_RS11685;Dbxref=GenBank:WP_014725479.1;Name=WP_014725479.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659330.1;locus_tag=LDO38_RS11685;product=Orn/Lys/Arg decarboxylase N-terminal domain-containing protein;protein_id=WP_014725479.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 23479 24213 . - . ID=gene-LDO38_RS11690;Name=LDO38_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11690;old_locus_tag=BVI2075_270030 NZ_CAJZAL010000127.1 Protein Homology CDS 23479 24213 . - 0 ID=cds-WP_176044045.1;Parent=gene-LDO38_RS11690;Dbxref=GenBank:WP_176044045.1;Name=WP_176044045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758161.1;locus_tag=LDO38_RS11690;product=hypothetical protein;protein_id=WP_176044045.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 24375 25349 . - . ID=gene-LDO38_RS11695;Name=ftrA;gbkey=Gene;gene=ftrA;gene_biotype=protein_coding;locus_tag=LDO38_RS11695;old_locus_tag=BVI2075_270032 NZ_CAJZAL010000127.1 Protein Homology CDS 24375 25349 . - 0 ID=cds-WP_011882702.1;Parent=gene-LDO38_RS11695;Dbxref=GenBank:WP_011882702.1;Name=WP_011882702.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=ftrA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882702.1;locus_tag=LDO38_RS11695;product=transcriptional regulator FtrA;protein_id=WP_011882702.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 25461 25880 . + . ID=gene-LDO38_RS11700;Name=LDO38_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11700;old_locus_tag=BVI2075_270031 NZ_CAJZAL010000127.1 Protein Homology CDS 25461 25880 . + 0 ID=cds-WP_176000132.1;Parent=gene-LDO38_RS11700;Dbxref=GenBank:WP_176000132.1;Name=WP_176000132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882703.1;locus_tag=LDO38_RS11700;product=rhodanese-like domain-containing protein;protein_id=WP_176000132.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 25982 26308 . + . ID=gene-LDO38_RS11705;Name=LDO38_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11705;old_locus_tag=BVI2075_270033 NZ_CAJZAL010000127.1 Protein Homology CDS 25982 26308 . + 0 ID=cds-WP_011882704.1;Parent=gene-LDO38_RS11705;Dbxref=GenBank:WP_011882704.1;Name=WP_011882704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027681.1;locus_tag=LDO38_RS11705;product=superinfection immunity protein;protein_id=WP_011882704.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 26318 27505 . - . ID=gene-LDO38_RS11710;Name=LDO38_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11710;old_locus_tag=BVI2075_270034 NZ_CAJZAL010000127.1 Protein Homology CDS 26318 27505 . - 0 ID=cds-WP_212183482.1;Parent=gene-LDO38_RS11710;Dbxref=GenBank:WP_212183482.1;Name=WP_212183482.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882705.1;locus_tag=LDO38_RS11710;product=cytochrome P450;protein_id=WP_212183482.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 27754 28020 . - . ID=gene-LDO38_RS11715;Name=LDO38_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11715;old_locus_tag=BVI2075_270035 NZ_CAJZAL010000127.1 Protein Homology CDS 27754 28020 . - 0 ID=cds-WP_043292321.1;Parent=gene-LDO38_RS11715;Dbxref=GenBank:WP_043292321.1;Name=WP_043292321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396526.1;locus_tag=LDO38_RS11715;product=YodC family protein;protein_id=WP_043292321.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 28357 29217 . - . ID=gene-LDO38_RS11720;Name=LDO38_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11720;old_locus_tag=BVI2075_270036 NZ_CAJZAL010000127.1 Protein Homology CDS 28357 29217 . - 0 ID=cds-WP_059474712.1;Parent=gene-LDO38_RS11720;Dbxref=GenBank:WP_059474712.1;Name=WP_059474712.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498871.1;locus_tag=LDO38_RS11720;product=isocitrate lyase/PEP mutase family protein;protein_id=WP_059474712.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 29428 30288 . - . ID=gene-LDO38_RS11725;Name=LDO38_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11725;old_locus_tag=BVI2075_270037 NZ_CAJZAL010000127.1 Protein Homology CDS 29428 30288 . - 0 ID=cds-WP_059474698.1;Parent=gene-LDO38_RS11725;Dbxref=GenBank:WP_059474698.1;Name=WP_059474698.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010108400.1;locus_tag=LDO38_RS11725;product=MurR/RpiR family transcriptional regulator;protein_id=WP_059474698.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 30344 30697 . - . ID=gene-LDO38_RS11730;Name=LDO38_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11730;old_locus_tag=BVI2075_270039 NZ_CAJZAL010000127.1 Protein Homology CDS 30344 30697 . - 0 ID=cds-WP_011882709.1;Parent=gene-LDO38_RS11730;Dbxref=GenBank:WP_011882709.1;Name=WP_011882709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753955.1;locus_tag=LDO38_RS11730;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_011882709.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 30908 31570 . + . ID=gene-LDO38_RS11735;Name=LDO38_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11735;old_locus_tag=BVI2075_270038 NZ_CAJZAL010000127.1 Protein Homology CDS 30908 31570 . + 0 ID=cds-WP_011882710.1;Parent=gene-LDO38_RS11735;Dbxref=GenBank:WP_011882710.1;Name=WP_011882710.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194706.1;locus_tag=LDO38_RS11735;product=response regulator;protein_id=WP_011882710.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 31567 32943 . + . ID=gene-LDO38_RS11740;Name=LDO38_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11740;old_locus_tag=BVI2075_270040 NZ_CAJZAL010000127.1 Protein Homology CDS 31567 32943 . + 0 ID=cds-WP_069246435.1;Parent=gene-LDO38_RS11740;Dbxref=GenBank:WP_069246435.1;Name=WP_069246435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410593.1;locus_tag=LDO38_RS11740;product=ATP-binding protein;protein_id=WP_069246435.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 33854 34054 . + . ID=gene-LDO38_RS11745;Name=LDO38_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11745;old_locus_tag=BVI2075_270042 NZ_CAJZAL010000127.1 Protein Homology CDS 33854 34054 . + 0 ID=cds-WP_011882712.1;Parent=gene-LDO38_RS11745;Dbxref=GenBank:WP_011882712.1;Name=WP_011882712.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882712.1;locus_tag=LDO38_RS11745;product=DUF805 domain-containing protein;protein_id=WP_011882712.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 34524 35417 . - . ID=gene-LDO38_RS11750;Name=blaPEN-bcc;gbkey=Gene;gene=blaPEN-bcc;gene_biotype=protein_coding;locus_tag=LDO38_RS11750;old_locus_tag=BVI2075_270044 NZ_CAJZAL010000127.1 Protein Homology CDS 34524 35417 . - 0 ID=cds-WP_060042534.1;Parent=gene-LDO38_RS11750;Dbxref=GenBank:WP_060042534.1;Name=WP_060042534.1;Ontology_term=GO:0008800;gbkey=CDS;gene=blaPEN-bcc;go_function=beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659342.1;locus_tag=LDO38_RS11750;product=PEN family class A beta-lactamase%2C Bcc-type;protein_id=WP_060042534.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 35534 36424 . + . ID=gene-LDO38_RS11755;Name=penR;gbkey=Gene;gene=penR;gene_biotype=protein_coding;locus_tag=LDO38_RS11755;old_locus_tag=BVI2075_270045 NZ_CAJZAL010000127.1 Protein Homology CDS 35534 36424 . + 0 ID=cds-WP_011882714.1;Parent=gene-LDO38_RS11755;Dbxref=GenBank:WP_011882714.1;Name=WP_011882714.1;gbkey=CDS;gene=penR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758175.1;locus_tag=LDO38_RS11755;product=beta-lactamase transcriptional regulator PenR;protein_id=WP_011882714.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 36932 37186 . - . ID=gene-LDO38_RS11760;Name=LDO38_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11760;old_locus_tag=BVI2075_270046 NZ_CAJZAL010000127.1 Protein Homology CDS 36932 37186 . - 0 ID=cds-WP_011880668.1;Parent=gene-LDO38_RS11760;Dbxref=GenBank:WP_011880668.1;Name=WP_011880668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354368.1;locus_tag=LDO38_RS11760;product=hypothetical protein;protein_id=WP_011880668.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 37285 39510 . - . ID=gene-LDO38_RS11765;Name=LDO38_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11765;old_locus_tag=BVI2075_270047 NZ_CAJZAL010000127.1 Protein Homology CDS 37285 39510 . - 0 ID=cds-WP_011880669.1;Parent=gene-LDO38_RS11765;Dbxref=GenBank:WP_011880669.1;Name=WP_011880669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898673.1;locus_tag=LDO38_RS11765;product=amylo-alpha-1%2C6-glucosidase;protein_id=WP_011880669.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 39658 40692 . - . ID=gene-LDO38_RS11770;Name=LDO38_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11770;old_locus_tag=BVI2075_270048 NZ_CAJZAL010000127.1 Protein Homology CDS 39658 40692 . - 0 ID=cds-WP_034195446.1;Parent=gene-LDO38_RS11770;Dbxref=GenBank:WP_034195446.1;Name=WP_034195446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366613.1;locus_tag=LDO38_RS11770;product=rod shape-determining protein;protein_id=WP_034195446.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 40829 41053 . + . ID=gene-LDO38_RS30525;Name=LDO38_RS30525;end_range=41053,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30525;partial=true NZ_CAJZAL010000127.1 Protein Homology CDS 40829 41053 . + 0 ID=cds-WP_435520940.1;Parent=gene-LDO38_RS30525;Dbxref=GenBank:WP_435520940.1;Name=WP_435520940.1;end_range=41053,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723895.1;locus_tag=LDO38_RS30525;partial=true;product=hypothetical protein;protein_id=WP_435520940.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 41064 43365 . + . ID=gene-LDO38_RS11775;Name=LDO38_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11775;old_locus_tag=BVI2075_270050;partial=true;start_range=.,41064 NZ_CAJZAL010000127.1 Protein Homology CDS 41064 43365 . + 1 ID=cds-WP_435520939.1;Parent=gene-LDO38_RS11775;Dbxref=GenBank:WP_435520939.1;Name=WP_435520939.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723895.1;locus_tag=LDO38_RS11775;partial=true;product=patatin-like phospholipase family protein;protein_id=WP_435520939.1;start_range=.,41064;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 43378 44508 . - . ID=gene-LDO38_RS11780;Name=LDO38_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11780;old_locus_tag=BVI2075_270051 NZ_CAJZAL010000127.1 Protein Homology CDS 43378 44508 . - 0 ID=cds-WP_059474694.1;Parent=gene-LDO38_RS11780;Dbxref=GenBank:WP_059474694.1;Name=WP_059474694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880672.1;locus_tag=LDO38_RS11780;product=ATP-binding protein;protein_id=WP_059474694.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 44576 45286 . - . ID=gene-LDO38_RS11785;Name=LDO38_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11785;old_locus_tag=BVI2075_270052 NZ_CAJZAL010000127.1 Protein Homology CDS 44576 45286 . - 0 ID=cds-WP_011880673.1;Parent=gene-LDO38_RS11785;Dbxref=GenBank:WP_011880673.1;Name=WP_011880673.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184573.1;locus_tag=LDO38_RS11785;product=response regulator;protein_id=WP_011880673.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 45507 46421 . + . ID=gene-LDO38_RS11790;Name=LDO38_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11790;old_locus_tag=BVI2075_270053 NZ_CAJZAL010000127.1 Protein Homology CDS 45507 46421 . + 0 ID=cds-WP_011880674.1;Parent=gene-LDO38_RS11790;Dbxref=GenBank:WP_011880674.1;Name=WP_011880674.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530118.1;locus_tag=LDO38_RS11790;product=glutaminase;protein_id=WP_011880674.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 46670 47227 . - . ID=gene-LDO38_RS11795;Name=LDO38_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11795;old_locus_tag=BVI2075_270054 NZ_CAJZAL010000127.1 GeneMarkS-2+ CDS 46670 47227 . - 0 ID=cds-WP_059474693.1;Parent=gene-LDO38_RS11795;Dbxref=GenBank:WP_059474693.1;Name=WP_059474693.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS11795;product=hypothetical protein;protein_id=WP_059474693.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq pseudogene 47513 48962 . - . ID=gene-LDO38_RS11800;Name=LDO38_RS11800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS11800;old_locus_tag=BVI2075_270056;pseudo=true NZ_CAJZAL010000127.1 Protein Homology CDS 47513 48962 . - 0 ID=cds-LDO38_RS11800;Parent=gene-LDO38_RS11800;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094623.1;locus_tag=LDO38_RS11800;product=IS1182 family transposase;pseudo=true;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 49077 49697 . - . ID=gene-LDO38_RS11805;Name=LDO38_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11805;old_locus_tag=BVI2075_270058 NZ_CAJZAL010000127.1 Protein Homology CDS 49077 49697 . - 0 ID=cds-WP_069240416.1;Parent=gene-LDO38_RS11805;Dbxref=GenBank:WP_069240416.1;Name=WP_069240416.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416813.1;locus_tag=LDO38_RS11805;product=LysE family translocator;protein_id=WP_069240416.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 49848 51740 . - . ID=gene-LDO38_RS11810;Name=LDO38_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11810;old_locus_tag=BVI2075_270060 NZ_CAJZAL010000127.1 Protein Homology CDS 49848 51740 . - 0 ID=cds-WP_069240417.1;Parent=gene-LDO38_RS11810;Dbxref=GenBank:WP_069240417.1;Name=WP_069240417.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534797.1;locus_tag=LDO38_RS11810;product=SAM-dependent methyltransferase;protein_id=WP_069240417.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 52177 53412 . + . ID=gene-LDO38_RS11815;Name=LDO38_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11815;old_locus_tag=BVI2075_270062 NZ_CAJZAL010000127.1 Protein Homology CDS 52177 53412 . + 0 ID=cds-WP_059460569.1;Parent=gene-LDO38_RS11815;Dbxref=GenBank:WP_059460569.1;Name=WP_059460569.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723898.1;locus_tag=LDO38_RS11815;product=MFS transporter;protein_id=WP_059460569.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 53474 54400 . + . ID=gene-LDO38_RS11820;Name=LDO38_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11820;old_locus_tag=BVI2075_270063 NZ_CAJZAL010000127.1 Protein Homology CDS 53474 54400 . + 0 ID=cds-WP_224056444.1;Parent=gene-LDO38_RS11820;Dbxref=GenBank:WP_224056444.1;Name=WP_224056444.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880679.1;locus_tag=LDO38_RS11820;product=LysR family transcriptional regulator;protein_id=WP_224056444.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 54489 56018 . + . ID=gene-LDO38_RS11825;Name=LDO38_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11825;old_locus_tag=BVI2075_270064 NZ_CAJZAL010000127.1 Protein Homology CDS 54489 56018 . + 0 ID=cds-WP_059739067.1;Parent=gene-LDO38_RS11825;Dbxref=GenBank:WP_059739067.1;Name=WP_059739067.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723900.1;locus_tag=LDO38_RS11825;product=amidase;protein_id=WP_059739067.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 56027 57388 . + . ID=gene-LDO38_RS11830;Name=LDO38_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11830;old_locus_tag=BVI2075_270065 NZ_CAJZAL010000127.1 Protein Homology CDS 56027 57388 . + 0 ID=cds-WP_011880681.1;Parent=gene-LDO38_RS11830;Dbxref=GenBank:WP_011880681.1;Name=WP_011880681.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880681.1;locus_tag=LDO38_RS11830;product=D-serine ammonia-lyase;protein_id=WP_011880681.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 57615 58439 . + . ID=gene-LDO38_RS11835;Name=LDO38_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11835;old_locus_tag=BVI2075_270066 NZ_CAJZAL010000127.1 Protein Homology CDS 57615 58439 . + 0 ID=cds-WP_059739071.1;Parent=gene-LDO38_RS11835;Dbxref=GenBank:WP_059739071.1;Name=WP_059739071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880682.1;locus_tag=LDO38_RS11835;product=alpha/beta fold hydrolase;protein_id=WP_059739071.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 58688 59071 . - . ID=gene-LDO38_RS11840;Name=LDO38_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11840;old_locus_tag=BVI2075_270068 NZ_CAJZAL010000127.1 Protein Homology CDS 58688 59071 . - 0 ID=cds-WP_014723903.1;Parent=gene-LDO38_RS11840;Dbxref=GenBank:WP_014723903.1;Name=WP_014723903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403790.1;locus_tag=LDO38_RS11840;product=hypothetical protein;protein_id=WP_014723903.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 59429 60064 . + . ID=gene-LDO38_RS11845;Name=LDO38_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11845;old_locus_tag=BVI2075_270069 NZ_CAJZAL010000127.1 Protein Homology CDS 59429 60064 . + 0 ID=cds-WP_069246434.1;Parent=gene-LDO38_RS11845;Dbxref=GenBank:WP_069246434.1;Name=WP_069246434.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898651.1;locus_tag=LDO38_RS11845;product=isochorismatase family cysteine hydrolase;protein_id=WP_069246434.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 60132 60863 . - . ID=gene-LDO38_RS11850;Name=LDO38_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11850;old_locus_tag=BVI2075_270070 NZ_CAJZAL010000127.1 Protein Homology CDS 60132 60863 . - 0 ID=cds-WP_069246433.1;Parent=gene-LDO38_RS11850;Dbxref=GenBank:WP_069246433.1;Name=WP_069246433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009971536.1;locus_tag=LDO38_RS11850;product=ribonuclease T2;protein_id=WP_069246433.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 61188 62327 . - . ID=gene-LDO38_RS11855;Name=LDO38_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11855;old_locus_tag=BVI2075_270071 NZ_CAJZAL010000127.1 Protein Homology CDS 61188 62327 . - 0 ID=cds-WP_014723906.1;Parent=gene-LDO38_RS11855;Dbxref=GenBank:WP_014723906.1;Name=WP_014723906.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880686.1;locus_tag=LDO38_RS11855;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_014723906.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 62324 63115 . - . ID=gene-LDO38_RS11860;Name=LDO38_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11860;old_locus_tag=BVI2075_270072 NZ_CAJZAL010000127.1 Protein Homology CDS 62324 63115 . - 0 ID=cds-WP_069246432.1;Parent=gene-LDO38_RS11860;Dbxref=GenBank:WP_069246432.1;Name=WP_069246432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354326.1;locus_tag=LDO38_RS11860;product=enoyl-CoA hydratase;protein_id=WP_069246432.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 63115 64014 . - . ID=gene-LDO38_RS11865;Name=mmsB;gbkey=Gene;gene=mmsB;gene_biotype=protein_coding;locus_tag=LDO38_RS11865;old_locus_tag=BVI2075_270073 NZ_CAJZAL010000127.1 Protein Homology CDS 63115 64014 . - 0 ID=cds-WP_059734111.1;Parent=gene-LDO38_RS11865;Dbxref=GenBank:WP_059734111.1;Name=WP_059734111.1;Ontology_term=GO:0006574,GO:0008442,GO:0051287;gbkey=CDS;gene=mmsB;go_function=3-hydroxyisobutyrate dehydrogenase activity|0008442||IEA,NAD binding|0051287||IEA;go_process=L-valine catabolic process|0006574||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880688.1;locus_tag=LDO38_RS11865;product=3-hydroxyisobutyrate dehydrogenase;protein_id=WP_059734111.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 64033 65562 . - . ID=gene-LDO38_RS11870;Name=LDO38_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11870;old_locus_tag=BVI2075_270074 NZ_CAJZAL010000127.1 Protein Homology CDS 64033 65562 . - 0 ID=cds-WP_014723909.1;Parent=gene-LDO38_RS11870;Dbxref=GenBank:WP_014723909.1;Name=WP_014723909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658468.1;locus_tag=LDO38_RS11870;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_014723909.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 65705 67417 . - . ID=gene-LDO38_RS11875;Name=LDO38_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11875;old_locus_tag=BVI2075_270075 NZ_CAJZAL010000127.1 Protein Homology CDS 65705 67417 . - 0 ID=cds-WP_045577759.1;Parent=gene-LDO38_RS11875;Dbxref=GenBank:WP_045577759.1;Name=WP_045577759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530826.1;locus_tag=LDO38_RS11875;product=AMP-binding protein;protein_id=WP_045577759.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 67648 68781 . - . ID=gene-LDO38_RS11880;Name=LDO38_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11880;old_locus_tag=BVI2075_270076 NZ_CAJZAL010000127.1 Protein Homology CDS 67648 68781 . - 0 ID=cds-WP_014723911.1;Parent=gene-LDO38_RS11880;Dbxref=GenBank:WP_014723911.1;Name=WP_014723911.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603915.1;locus_tag=LDO38_RS11880;product=acyl-CoA dehydrogenase family protein;protein_id=WP_014723911.1;transl_table=11 NZ_CAJZAL010000127.1 RefSeq gene 68919 69953 . + . ID=gene-LDO38_RS11885;Name=LDO38_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11885;old_locus_tag=BVI2075_270077 NZ_CAJZAL010000127.1 Protein Homology CDS 68919 69953 . + 0 ID=cds-WP_011880692.1;Parent=gene-LDO38_RS11885;Dbxref=GenBank:WP_011880692.1;Name=WP_011880692.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880692.1;locus_tag=LDO38_RS11885;product=AraC family transcriptional regulator;protein_id=WP_011880692.1;transl_table=11 ##sequence-region NZ_CAJZAL010000128.1 1 66823 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000128.1 RefSeq region 1 66823 . + . ID=NZ_CAJZAL010000128.1:1..66823;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_28 NZ_CAJZAL010000128.1 RefSeq gene 1 205 . + . ID=gene-LDO38_RS11890;Name=LDO38_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11890;old_locus_tag=BVI2075_280001;partial=true;start_range=.,1 NZ_CAJZAL010000128.1 Protein Homology CDS 1 205 . + 1 ID=cds-WP_224056445.1;Parent=gene-LDO38_RS11890;Dbxref=GenBank:WP_224056445.1;Name=WP_224056445.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015002008.1;locus_tag=LDO38_RS11890;partial=true;product=chloride channel protein;protein_id=WP_224056445.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 242 652 . + . ID=gene-LDO38_RS11895;Name=LDO38_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11895;old_locus_tag=BVI2075_280002 NZ_CAJZAL010000128.1 Protein Homology CDS 242 652 . + 0 ID=cds-WP_155625204.1;Parent=gene-LDO38_RS11895;Dbxref=GenBank:WP_155625204.1;Name=WP_155625204.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF047384.1;locus_tag=LDO38_RS11895;product=BspC domain-containing protein;protein_id=WP_155625204.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 968 2050 . + . ID=gene-LDO38_RS11900;Name=LDO38_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11900;old_locus_tag=BVI2075_280003 NZ_CAJZAL010000128.1 Protein Homology CDS 968 2050 . + 0 ID=cds-WP_059474745.1;Parent=gene-LDO38_RS11900;Dbxref=GenBank:WP_059474745.1;Name=WP_059474745.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009239924.1;locus_tag=LDO38_RS11900;product=mechanosensitive ion channel family protein;protein_id=WP_059474745.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 2132 3790 . - . ID=gene-LDO38_RS11905;Name=LDO38_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11905;old_locus_tag=BVI2075_280004 NZ_CAJZAL010000128.1 Protein Homology CDS 2132 3790 . - 0 ID=cds-WP_059474746.1;Parent=gene-LDO38_RS11905;Dbxref=GenBank:WP_059474746.1;Name=WP_059474746.1;Ontology_term=GO:0009252,GO:0051301,GO:0071555,GO:0008658,GO:0008955,GO:0009002,GO:0016787,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766141.1;locus_tag=LDO38_RS11905;product=peptidoglycan D%2CD-transpeptidase FtsI family protein;protein_id=WP_059474746.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 4767 5255 . + . ID=gene-LDO38_RS11910;Name=LDO38_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11910;old_locus_tag=BVI2075_280007 NZ_CAJZAL010000128.1 Protein Homology CDS 4767 5255 . + 0 ID=cds-WP_155625205.1;Parent=gene-LDO38_RS11910;Dbxref=GenBank:WP_155625205.1;Name=WP_155625205.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: protein motif:HMM:NF012791.6;locus_tag=LDO38_RS11910;product=universal stress protein;protein_id=WP_155625205.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 5239 5418 . - . ID=gene-LDO38_RS11915;Name=LDO38_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11915 NZ_CAJZAL010000128.1 GeneMarkS-2+ CDS 5239 5418 . - 0 ID=cds-WP_155625206.1;Parent=gene-LDO38_RS11915;Dbxref=GenBank:WP_155625206.1;Name=WP_155625206.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS11915;product=hypothetical protein;protein_id=WP_155625206.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq pseudogene 5681 6127 . - . ID=gene-LDO38_RS11920;Name=petA;end_range=6127,.;gbkey=Gene;gene=petA;gene_biotype=pseudogene;locus_tag=LDO38_RS11920;old_locus_tag=BVI2075_280008;partial=true;pseudo=true NZ_CAJZAL010000128.1 Protein Homology CDS 5681 6127 . - 0 ID=cds-LDO38_RS11920;Parent=gene-LDO38_RS11920;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009060,GO:0008121,GO:0009055,GO:0045275;end_range=6127,.;gbkey=CDS;gene=petA;go_component=respiratory chain complex III|0045275||IEA;go_function=quinol-cytochrome-c reductase activity|0008121||IEA,electron transfer activity|0009055||IEA;go_process=aerobic respiration|0009060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491868.1;locus_tag=LDO38_RS11920;partial=true;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;pseudo=true;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 6292 7803 . - . ID=gene-LDO38_RS11925;Name=LDO38_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11925;old_locus_tag=BVI2075_280009 NZ_CAJZAL010000128.1 Protein Homology CDS 6292 7803 . - 0 ID=cds-WP_224056446.1;Parent=gene-LDO38_RS11925;Dbxref=GenBank:WP_224056446.1;Name=WP_224056446.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014193730.1;locus_tag=LDO38_RS11925;product=sensor domain-containing diguanylate cyclase;protein_id=WP_224056446.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 8254 9111 . - . ID=gene-LDO38_RS11930;Name=LDO38_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11930;old_locus_tag=BVI2075_280012 NZ_CAJZAL010000128.1 Protein Homology CDS 8254 9111 . - 0 ID=cds-WP_059474749.1;Parent=gene-LDO38_RS11930;Dbxref=GenBank:WP_059474749.1;Name=WP_059474749.1;Ontology_term=GO:0042777,GO:0005524,GO:0046933,GO:0045259;gbkey=CDS;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=ATP binding|0005524||IEA,proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven plasma membrane ATP synthesis|0042777||IEA;inference=COORDINATES: protein motif:HMM:NF012456.6;locus_tag=LDO38_RS11930;product=F0F1 ATP synthase subunit gamma;protein_id=WP_059474749.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 9108 10640 . - . ID=gene-LDO38_RS11935;Name=LDO38_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11935;old_locus_tag=BVI2075_280013 NZ_CAJZAL010000128.1 Protein Homology CDS 9108 10640 . - 0 ID=cds-WP_059474757.1;Parent=gene-LDO38_RS11935;Dbxref=GenBank:WP_059474757.1;Name=WP_059474757.1;Ontology_term=GO:0015986,GO:0005524,GO:0046933,GO:0045259;gbkey=CDS;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=ATP binding|0005524||IEA,proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017774101.1;locus_tag=LDO38_RS11935;product=F0F1 ATP synthase subunit alpha;protein_id=WP_059474757.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 10633 11385 . - . ID=gene-LDO38_RS11940;Name=LDO38_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11940;old_locus_tag=BVI2075_280014 NZ_CAJZAL010000128.1 Protein Homology CDS 10633 11385 . - 0 ID=cds-WP_045577977.1;Parent=gene-LDO38_RS11940;Dbxref=GenBank:WP_045577977.1;Name=WP_045577977.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: protein motif:HMM:NF012645.6;locus_tag=LDO38_RS11940;product=F0F1 ATP synthase subunit B family protein;protein_id=WP_045577977.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 11395 11643 . - . ID=gene-LDO38_RS11945;Name=LDO38_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11945;old_locus_tag=BVI2075_280015 NZ_CAJZAL010000128.1 Protein Homology CDS 11395 11643 . - 0 ID=cds-WP_038442209.1;Parent=gene-LDO38_RS11945;Dbxref=GenBank:WP_038442209.1;Name=WP_038442209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012427417.1;locus_tag=LDO38_RS11945;product=F0F1 ATP synthase subunit C;protein_id=WP_038442209.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 11640 12338 . - . ID=gene-LDO38_RS11950;Name=LDO38_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11950;old_locus_tag=BVI2075_280016 NZ_CAJZAL010000128.1 Protein Homology CDS 11640 12338 . - 0 ID=cds-WP_059474750.1;Parent=gene-LDO38_RS11950;Dbxref=GenBank:WP_059474750.1;Name=WP_059474750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012400528.1;locus_tag=LDO38_RS11950;product=F0F1 ATP synthase subunit A;protein_id=WP_059474750.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 12335 12619 . - . ID=gene-LDO38_RS11955;Name=LDO38_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11955;old_locus_tag=BVI2075_280017 NZ_CAJZAL010000128.1 Protein Homology CDS 12335 12619 . - 0 ID=cds-WP_059474751.1;Parent=gene-LDO38_RS11955;Dbxref=GenBank:WP_059474751.1;Name=WP_059474751.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024368.6;locus_tag=LDO38_RS11955;product=N-ATPase subunit AtpR;protein_id=WP_059474751.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 12623 12982 . - . ID=gene-LDO38_RS11960;Name=LDO38_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11960;old_locus_tag=BVI2075_280018 NZ_CAJZAL010000128.1 Protein Homology CDS 12623 12982 . - 0 ID=cds-WP_196484617.1;Parent=gene-LDO38_RS11960;Dbxref=GenBank:WP_196484617.1;Name=WP_196484617.1;Ontology_term=GO:1902600,GO:0045259;gbkey=CDS;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012427420.1;locus_tag=LDO38_RS11960;product=AtpZ/AtpI family protein;protein_id=WP_196484617.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 12957 13421 . - . ID=gene-LDO38_RS11965;Name=LDO38_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11965;old_locus_tag=BVI2075_280019 NZ_CAJZAL010000128.1 Protein Homology CDS 12957 13421 . - 0 ID=cds-WP_059474752.1;Parent=gene-LDO38_RS11965;Dbxref=GenBank:WP_059474752.1;Name=WP_059474752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009982027.1;locus_tag=LDO38_RS11965;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_059474752.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 13418 14848 . - . ID=gene-LDO38_RS11970;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=LDO38_RS11970;old_locus_tag=BVI2075_280020 NZ_CAJZAL010000128.1 Protein Homology CDS 13418 14848 . - 0 ID=cds-WP_059474753.1;Parent=gene-LDO38_RS11970;Dbxref=GenBank:WP_059474753.1;Name=WP_059474753.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011493236.1;locus_tag=LDO38_RS11970;product=F0F1 ATP synthase subunit beta;protein_id=WP_059474753.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 15179 15868 . + . ID=gene-LDO38_RS11975;Name=LDO38_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11975;old_locus_tag=BVI2075_280022 NZ_CAJZAL010000128.1 Protein Homology CDS 15179 15868 . + 0 ID=cds-WP_059474754.1;Parent=gene-LDO38_RS11975;Dbxref=GenBank:WP_059474754.1;Name=WP_059474754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014251891.1;locus_tag=LDO38_RS11975;product=CBS domain-containing protein;protein_id=WP_059474754.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 16020 16706 . + . ID=gene-LDO38_RS11980;Name=LDO38_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11980;old_locus_tag=BVI2075_280023 NZ_CAJZAL010000128.1 GeneMarkS-2+ CDS 16020 16706 . + 0 ID=cds-WP_059474755.1;Parent=gene-LDO38_RS11980;Dbxref=GenBank:WP_059474755.1;Name=WP_059474755.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS11980;product=hypothetical protein;protein_id=WP_059474755.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 16791 17066 . + . ID=gene-LDO38_RS11985;Name=LDO38_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11985;old_locus_tag=BVI2075_280025 NZ_CAJZAL010000128.1 GeneMarkS-2+ CDS 16791 17066 . + 0 ID=cds-WP_059474756.1;Parent=gene-LDO38_RS11985;Dbxref=GenBank:WP_059474756.1;Name=WP_059474756.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS11985;product=hypothetical protein;protein_id=WP_059474756.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 17326 17700 . + . ID=gene-LDO38_RS11990;Name=LDO38_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS11990;old_locus_tag=BVI2075_280026 NZ_CAJZAL010000128.1 Protein Homology CDS 17326 17700 . + 0 ID=cds-WP_059474758.1;Parent=gene-LDO38_RS11990;Dbxref=GenBank:WP_059474758.1;Name=WP_059474758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009770313.1;locus_tag=LDO38_RS11990;product=STAS/SEC14 domain-containing protein;protein_id=WP_059474758.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 17774 18571 . - . ID=gene-LDO38_RS11995;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=LDO38_RS11995;old_locus_tag=BVI2075_280028 NZ_CAJZAL010000128.1 Protein Homology CDS 17774 18571 . - 0 ID=cds-WP_224056447.1;Parent=gene-LDO38_RS11995;Dbxref=GenBank:WP_224056447.1;Name=WP_224056447.1;Ontology_term=GO:0005524;gbkey=CDS;gene=istB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009977602.1;locus_tag=LDO38_RS11995;product=IS21-like element helper ATPase IstB;protein_id=WP_224056447.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq pseudogene 18561 19448 . - . ID=gene-LDO38_RS12000;Name=LDO38_RS12000;end_range=19448,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS12000;old_locus_tag=BVI2075_280029;partial=true;pseudo=true NZ_CAJZAL010000128.1 Protein Homology CDS 18561 19448 . - 0 ID=cds-LDO38_RS12000;Parent=gene-LDO38_RS12000;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=19448,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612028.1;locus_tag=LDO38_RS12000;partial=true;product=Mu transposase domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 20561 21775 . + . ID=gene-LDO38_RS12005;Name=LDO38_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12005;old_locus_tag=BVI2075_280032 NZ_CAJZAL010000128.1 Protein Homology CDS 20561 21775 . + 0 ID=cds-WP_224056448.1;Parent=gene-LDO38_RS12005;Dbxref=GenBank:WP_224056448.1;Name=WP_224056448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007741493.1;locus_tag=LDO38_RS12005;product=ImmA/IrrE family metallo-endopeptidase;protein_id=WP_224056448.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 21772 22296 . + . ID=gene-LDO38_RS12010;Name=LDO38_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12010;old_locus_tag=BVI2075_280033 NZ_CAJZAL010000128.1 Protein Homology CDS 21772 22296 . + 0 ID=cds-WP_059474806.1;Parent=gene-LDO38_RS12010;Dbxref=GenBank:WP_059474806.1;Name=WP_059474806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331324.1;locus_tag=LDO38_RS12010;product=DUF4411 family protein;protein_id=WP_059474806.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 22723 23625 . + . ID=gene-LDO38_RS12015;Name=LDO38_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12015;old_locus_tag=BVI2075_280034 NZ_CAJZAL010000128.1 Protein Homology CDS 22723 23625 . + 0 ID=cds-WP_059474807.1;Parent=gene-LDO38_RS12015;Dbxref=GenBank:WP_059474807.1;Name=WP_059474807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497952.1;locus_tag=LDO38_RS12015;product=LysR substrate-binding domain-containing protein;protein_id=WP_059474807.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 23749 25143 . - . ID=gene-LDO38_RS12020;Name=LDO38_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12020;old_locus_tag=BVI2075_280035 NZ_CAJZAL010000128.1 Protein Homology CDS 23749 25143 . - 0 ID=cds-WP_059474808.1;Parent=gene-LDO38_RS12020;Dbxref=GenBank:WP_059474808.1;Name=WP_059474808.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366420.1;locus_tag=LDO38_RS12020;product=efflux transporter outer membrane subunit;protein_id=WP_059474808.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 25140 28331 . - . ID=gene-LDO38_RS12025;Name=LDO38_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12025;old_locus_tag=BVI2075_280036 NZ_CAJZAL010000128.1 Protein Homology CDS 25140 28331 . - 0 ID=cds-WP_059474809.1;Parent=gene-LDO38_RS12025;Dbxref=GenBank:WP_059474809.1;Name=WP_059474809.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337059.1;locus_tag=LDO38_RS12025;product=efflux RND transporter permease subunit;protein_id=WP_059474809.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 28328 29527 . - . ID=gene-LDO38_RS12030;Name=LDO38_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12030;old_locus_tag=BVI2075_280037 NZ_CAJZAL010000128.1 Protein Homology CDS 28328 29527 . - 0 ID=cds-WP_059474825.1;Parent=gene-LDO38_RS12030;Dbxref=GenBank:WP_059474825.1;Name=WP_059474825.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497955.1;locus_tag=LDO38_RS12030;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_059474825.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 29821 30162 . - . ID=gene-LDO38_RS12035;Name=LDO38_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12035;old_locus_tag=BVI2075_280038 NZ_CAJZAL010000128.1 Protein Homology CDS 29821 30162 . - 0 ID=cds-WP_059474810.1;Parent=gene-LDO38_RS12035;Dbxref=GenBank:WP_059474810.1;Name=WP_059474810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549253.1;locus_tag=LDO38_RS12035;product=DUF4148 domain-containing protein;protein_id=WP_059474810.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 30378 31679 . - . ID=gene-LDO38_RS12040;Name=LDO38_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12040;old_locus_tag=BVI2075_280039 NZ_CAJZAL010000128.1 Protein Homology CDS 30378 31679 . - 0 ID=cds-WP_059474811.1;Parent=gene-LDO38_RS12040;Dbxref=GenBank:WP_059474811.1;Name=WP_059474811.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366416.1;locus_tag=LDO38_RS12040;product=MFS transporter;protein_id=WP_059474811.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 31741 32823 . - . ID=gene-LDO38_RS12045;Name=LDO38_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12045;old_locus_tag=BVI2075_280040 NZ_CAJZAL010000128.1 Protein Homology CDS 31741 32823 . - 0 ID=cds-WP_059474812.1;Parent=gene-LDO38_RS12045;Dbxref=GenBank:WP_059474812.1;Name=WP_059474812.1;Ontology_term=GO:0008270,GO:0008888,GO:0030554,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,glycerol dehydrogenase (NAD+) activity|0008888||IEA,adenyl nucleotide binding|0030554||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366415.1;locus_tag=LDO38_RS12045;product=glycerol dehydrogenase;protein_id=WP_059474812.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 33001 33831 . - . ID=gene-LDO38_RS12050;Name=LDO38_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12050;old_locus_tag=BVI2075_280041 NZ_CAJZAL010000128.1 Protein Homology CDS 33001 33831 . - 0 ID=cds-WP_059474826.1;Parent=gene-LDO38_RS12050;Dbxref=GenBank:WP_059474826.1;Name=WP_059474826.1;Ontology_term=GO:0016616,GO:0030554;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366414.1;locus_tag=LDO38_RS12050;product=shikimate dehydrogenase family protein;protein_id=WP_059474826.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 34072 34941 . + . ID=gene-LDO38_RS12055;Name=LDO38_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12055;old_locus_tag=BVI2075_280042 NZ_CAJZAL010000128.1 Protein Homology CDS 34072 34941 . + 0 ID=cds-WP_059474813.1;Parent=gene-LDO38_RS12055;Dbxref=GenBank:WP_059474813.1;Name=WP_059474813.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366413.1;locus_tag=LDO38_RS12055;product=transketolase;protein_id=WP_059474813.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 34944 35930 . + . ID=gene-LDO38_RS12060;Name=LDO38_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12060;old_locus_tag=BVI2075_280043 NZ_CAJZAL010000128.1 Protein Homology CDS 34944 35930 . + 0 ID=cds-WP_012366412.1;Parent=gene-LDO38_RS12060;Dbxref=GenBank:WP_012366412.1;Name=WP_012366412.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366412.1;locus_tag=LDO38_RS12060;product=transketolase family protein;protein_id=WP_012366412.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 36100 37581 . + . ID=gene-LDO38_RS12065;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=LDO38_RS12065;old_locus_tag=BVI2075_280044 NZ_CAJZAL010000128.1 Protein Homology CDS 36100 37581 . + 0 ID=cds-WP_059474814.1;Parent=gene-LDO38_RS12065;Dbxref=GenBank:WP_059474814.1;Name=WP_059474814.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366411.1;locus_tag=LDO38_RS12065;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_059474814.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 37664 38419 . - . ID=gene-LDO38_RS12070;Name=LDO38_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12070;old_locus_tag=BVI2075_280046 NZ_CAJZAL010000128.1 Protein Homology CDS 37664 38419 . - 0 ID=cds-WP_059474815.1;Parent=gene-LDO38_RS12070;Dbxref=GenBank:WP_059474815.1;Name=WP_059474815.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366410.1;locus_tag=LDO38_RS12070;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_059474815.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 38503 39756 . - . ID=gene-LDO38_RS12075;Name=LDO38_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12075;old_locus_tag=BVI2075_280047 NZ_CAJZAL010000128.1 Protein Homology CDS 38503 39756 . - 0 ID=cds-WP_059474816.1;Parent=gene-LDO38_RS12075;Dbxref=GenBank:WP_059474816.1;Name=WP_059474816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366409.1;locus_tag=LDO38_RS12075;product=sugar ABC transporter substrate-binding protein;protein_id=WP_059474816.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 39845 40840 . - . ID=gene-LDO38_RS12080;Name=LDO38_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12080;old_locus_tag=BVI2075_280048 NZ_CAJZAL010000128.1 Protein Homology CDS 39845 40840 . - 0 ID=cds-WP_059474817.1;Parent=gene-LDO38_RS12080;Dbxref=GenBank:WP_059474817.1;Name=WP_059474817.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366408.1;locus_tag=LDO38_RS12080;product=ABC transporter permease;protein_id=WP_059474817.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 40840 42333 . - . ID=gene-LDO38_RS12085;Name=LDO38_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12085;old_locus_tag=BVI2075_280049 NZ_CAJZAL010000128.1 Protein Homology CDS 40840 42333 . - 0 ID=cds-WP_059474818.1;Parent=gene-LDO38_RS12085;Dbxref=GenBank:WP_059474818.1;Name=WP_059474818.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366407.1;locus_tag=LDO38_RS12085;product=sugar ABC transporter ATP-binding protein;protein_id=WP_059474818.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 42629 44242 . + . ID=gene-LDO38_RS12090;Name=LDO38_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12090;old_locus_tag=BVI2075_280050 NZ_CAJZAL010000128.1 Protein Homology CDS 42629 44242 . + 0 ID=cds-WP_059474819.1;Parent=gene-LDO38_RS12090;Dbxref=GenBank:WP_059474819.1;Name=WP_059474819.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366406.1;locus_tag=LDO38_RS12090;product=GMC family oxidoreductase;protein_id=WP_059474819.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 44245 45255 . + . ID=gene-LDO38_RS12095;Name=LDO38_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12095;old_locus_tag=BVI2075_280051 NZ_CAJZAL010000128.1 Protein Homology CDS 44245 45255 . + 0 ID=cds-WP_012366405.1;Parent=gene-LDO38_RS12095;Dbxref=GenBank:WP_012366405.1;Name=WP_012366405.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019845.6;locus_tag=LDO38_RS12095;product=zinc-binding dehydrogenase;protein_id=WP_012366405.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 45348 46037 . + . ID=gene-LDO38_RS12100;Name=LDO38_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12100;old_locus_tag=BVI2075_280052 NZ_CAJZAL010000128.1 Protein Homology CDS 45348 46037 . + 0 ID=cds-WP_041490073.1;Parent=gene-LDO38_RS12100;Dbxref=GenBank:WP_041490073.1;Name=WP_041490073.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366404.1;locus_tag=LDO38_RS12100;product=GntR family transcriptional regulator;protein_id=WP_041490073.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 46130 46825 . - . ID=gene-LDO38_RS12105;Name=LDO38_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12105;old_locus_tag=BVI2075_280053 NZ_CAJZAL010000128.1 Protein Homology CDS 46130 46825 . - 0 ID=cds-WP_059474820.1;Parent=gene-LDO38_RS12105;Dbxref=GenBank:WP_059474820.1;Name=WP_059474820.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366403.1;locus_tag=LDO38_RS12105;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_059474820.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 47025 48446 . + . ID=gene-LDO38_RS12110;Name=LDO38_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12110;old_locus_tag=BVI2075_280054 NZ_CAJZAL010000128.1 Protein Homology CDS 47025 48446 . + 0 ID=cds-WP_059474821.1;Parent=gene-LDO38_RS12110;Dbxref=GenBank:WP_059474821.1;Name=WP_059474821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366402.1;locus_tag=LDO38_RS12110;product=aldehyde dehydrogenase family protein;protein_id=WP_059474821.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 48772 50634 . - . ID=gene-LDO38_RS12115;Name=LDO38_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12115;old_locus_tag=BVI2075_280055 NZ_CAJZAL010000128.1 GeneMarkS-2+ CDS 48772 50634 . - 0 ID=cds-WP_196484619.1;Parent=gene-LDO38_RS12115;Dbxref=GenBank:WP_196484619.1;Name=WP_196484619.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS12115;product=hypothetical protein;protein_id=WP_196484619.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 50627 51664 . - . ID=gene-LDO38_RS12120;Name=LDO38_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12120;old_locus_tag=BVI2075_280056 NZ_CAJZAL010000128.1 Protein Homology CDS 50627 51664 . - 0 ID=cds-WP_059474823.1;Parent=gene-LDO38_RS12120;Dbxref=GenBank:WP_059474823.1;Name=WP_059474823.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF024793.6;locus_tag=LDO38_RS12120;product=ATP-binding protein;protein_id=WP_059474823.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 51658 53619 . - . ID=gene-LDO38_RS12125;Name=LDO38_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12125;old_locus_tag=BVI2075_280057 NZ_CAJZAL010000128.1 GeneMarkS-2+ CDS 51658 53619 . - 0 ID=cds-WP_224056450.1;Parent=gene-LDO38_RS12125;Dbxref=GenBank:WP_224056450.1;Name=WP_224056450.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS12125;product=hypothetical protein;protein_id=WP_224056450.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 54193 55209 . + . ID=gene-LDO38_RS12130;Name=LDO38_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12130;old_locus_tag=BVI2075_280059 NZ_CAJZAL010000128.1 Protein Homology CDS 54193 55209 . + 0 ID=cds-WP_290371182.1;Parent=gene-LDO38_RS12130;Dbxref=GenBank:WP_290371182.1;Name=WP_290371182.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204848.1;locus_tag=LDO38_RS12130;product=NYN domain-containing protein;protein_id=WP_290371182.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 55314 57167 . + . ID=gene-LDO38_RS12135;Name=LDO38_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12135;old_locus_tag=BVI2075_280061 NZ_CAJZAL010000128.1 GeneMarkS-2+ CDS 55314 57167 . + 0 ID=cds-WP_155625188.1;Parent=gene-LDO38_RS12135;Dbxref=GenBank:WP_155625188.1;Name=WP_155625188.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS12135;product=NTPase KAP;protein_id=WP_155625188.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq pseudogene 57367 57685 . + . ID=gene-LDO38_RS12140;Name=LDO38_RS12140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS12140;partial=true;pseudo=true;start_range=.,57367 NZ_CAJZAL010000128.1 Protein Homology CDS 57367 57685 . + 0 ID=cds-LDO38_RS12140;Parent=gene-LDO38_RS12140;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722596.1;locus_tag=LDO38_RS12140;partial=true;product=DUF2345 domain-containing protein;pseudo=true;start_range=.,57367;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 57634 58224 . - . ID=gene-LDO38_RS12145;Name=LDO38_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12145;old_locus_tag=BVI2075_280062 NZ_CAJZAL010000128.1 Protein Homology CDS 57634 58224 . - 0 ID=cds-WP_224056451.1;Parent=gene-LDO38_RS12145;Dbxref=GenBank:WP_224056451.1;Name=WP_224056451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018423525.1;locus_tag=LDO38_RS12145;product=DUF4396 domain-containing protein;protein_id=WP_224056451.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 59087 59512 . + . ID=gene-LDO38_RS12150;Name=LDO38_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12150;old_locus_tag=BVI2075_280064 NZ_CAJZAL010000128.1 Protein Homology CDS 59087 59512 . + 0 ID=cds-WP_059474537.1;Parent=gene-LDO38_RS12150;Dbxref=GenBank:WP_059474537.1;Name=WP_059474537.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349261.1;locus_tag=LDO38_RS12150;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_059474537.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 59637 61238 . + . ID=gene-LDO38_RS12155;Name=LDO38_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12155;old_locus_tag=BVI2075_280065 NZ_CAJZAL010000128.1 Protein Homology CDS 59637 61238 . + 0 ID=cds-WP_059474532.1;Parent=gene-LDO38_RS12155;Dbxref=GenBank:WP_059474532.1;Name=WP_059474532.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349262.1;locus_tag=LDO38_RS12155;product=APC family permease;protein_id=WP_059474532.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq pseudogene 61560 62576 . + . ID=gene-LDO38_RS12160;Name=LDO38_RS12160;end_range=62576,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS12160;partial=true;pseudo=true NZ_CAJZAL010000128.1 Protein Homology CDS 61560 62576 . + 0 ID=cds-LDO38_RS12160;Parent=gene-LDO38_RS12160;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005247,GO:0034707;end_range=62576,.;gbkey=CDS;go_component=chloride channel complex|0034707||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: protein motif:HMM:NF012861.6;locus_tag=LDO38_RS12160;partial=true;product=chloride channel protein;pseudo=true;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 62779 63240 . + . ID=gene-LDO38_RS12165;Name=LDO38_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12165;old_locus_tag=BVI2075_280067 NZ_CAJZAL010000128.1 Protein Homology CDS 62779 63240 . + 0 ID=cds-WP_224056453.1;Parent=gene-LDO38_RS12165;Dbxref=GenBank:WP_224056453.1;Name=WP_224056453.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012780.6;locus_tag=LDO38_RS12165;product=CBS domain-containing protein;protein_id=WP_224056453.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 63230 63484 . + . ID=gene-LDO38_RS12170;Name=LDO38_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12170;old_locus_tag=BVI2075_280068 NZ_CAJZAL010000128.1 Protein Homology CDS 63230 63484 . + 0 ID=cds-WP_059474531.1;Parent=gene-LDO38_RS12170;Dbxref=GenBank:WP_059474531.1;Name=WP_059474531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013590518.1;locus_tag=LDO38_RS12170;product=hypothetical protein;protein_id=WP_059474531.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 63556 64059 . - . ID=gene-LDO38_RS12175;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=LDO38_RS12175;old_locus_tag=BVI2075_280069 NZ_CAJZAL010000128.1 Protein Homology CDS 63556 64059 . - 0 ID=cds-WP_059474530.1;Parent=gene-LDO38_RS12175;Dbxref=GenBank:WP_059474530.1;Name=WP_059474530.1;Ontology_term=GO:0009279;gbkey=CDS;gene=pal;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547681.1;locus_tag=LDO38_RS12175;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_059474530.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 64465 65652 . + . ID=gene-LDO38_RS12180;Name=LDO38_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12180;old_locus_tag=BVI2075_280071 NZ_CAJZAL010000128.1 Protein Homology CDS 64465 65652 . + 0 ID=cds-WP_354003681.1;Parent=gene-LDO38_RS12180;Dbxref=GenBank:WP_354003681.1;Name=WP_354003681.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886043.1;locus_tag=LDO38_RS12180;product=MFS transporter;protein_id=WP_354003681.1;transl_table=11 NZ_CAJZAL010000128.1 RefSeq gene 65709 66823 . + . ID=gene-LDO38_RS12185;Name=LDO38_RS12185;end_range=66823,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12185;partial=true NZ_CAJZAL010000128.1 Protein Homology CDS 65709 66823 . + 0 ID=cds-WP_224056454.1;Parent=gene-LDO38_RS12185;Dbxref=GenBank:WP_224056454.1;Name=WP_224056454.1;Ontology_term=GO:0006821,GO:0005247;end_range=66823,.;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349267.1;locus_tag=LDO38_RS12185;partial=true;product=chloride channel protein;protein_id=WP_224056454.1;transl_table=11 ##sequence-region NZ_CAJZAL010000129.1 1 53589 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000129.1 RefSeq region 1 53589 . + . ID=NZ_CAJZAL010000129.1:1..53589;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_29 NZ_CAJZAL010000129.1 RefSeq pseudogene 1 113 . + . ID=gene-LDO38_RS12190;Name=LDO38_RS12190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS12190;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000129.1 Protein Homology CDS 1 113 . + 2 ID=cds-LDO38_RS12190;Parent=gene-LDO38_RS12190;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011286074.1;locus_tag=LDO38_RS12190;partial=true;product=elongation factor Tu;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 395 706 . + . ID=gene-LDO38_RS12195;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=LDO38_RS12195;old_locus_tag=BVI2075_290001 NZ_CAJZAL010000129.1 Protein Homology CDS 395 706 . + 0 ID=cds-WP_004199280.1;Parent=gene-LDO38_RS12195;Dbxref=GenBank:WP_004199280.1;Name=WP_004199280.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199280.1;locus_tag=LDO38_RS12195;product=30S ribosomal protein S10;protein_id=WP_004199280.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 885 1535 . + . ID=gene-LDO38_RS12200;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=LDO38_RS12200;old_locus_tag=BVI2075_290002 NZ_CAJZAL010000129.1 Protein Homology CDS 885 1535 . + 0 ID=cds-WP_006752926.1;Parent=gene-LDO38_RS12200;Dbxref=GenBank:WP_006752926.1;Name=WP_006752926.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212557.1;locus_tag=LDO38_RS12200;product=50S ribosomal protein L3;protein_id=WP_006752926.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 1535 2155 . + . ID=gene-LDO38_RS12205;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=LDO38_RS12205;old_locus_tag=BVI2075_290003 NZ_CAJZAL010000129.1 Protein Homology CDS 1535 2155 . + 0 ID=cds-WP_006477192.1;Parent=gene-LDO38_RS12205;Dbxref=GenBank:WP_006477192.1;Name=WP_006477192.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350675.1;locus_tag=LDO38_RS12205;product=50S ribosomal protein L4;protein_id=WP_006477192.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 2152 2466 . + . ID=gene-LDO38_RS12210;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=LDO38_RS12210;old_locus_tag=BVI2075_290004 NZ_CAJZAL010000129.1 Protein Homology CDS 2152 2466 . + 0 ID=cds-WP_004199275.1;Parent=gene-LDO38_RS12210;Dbxref=GenBank:WP_004199275.1;Name=WP_004199275.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008343846.1;locus_tag=LDO38_RS12210;product=50S ribosomal protein L23;protein_id=WP_004199275.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 2469 3296 . + . ID=gene-LDO38_RS12215;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=LDO38_RS12215;old_locus_tag=BVI2075_290005 NZ_CAJZAL010000129.1 Protein Homology CDS 2469 3296 . + 0 ID=cds-WP_011883004.1;Parent=gene-LDO38_RS12215;Dbxref=GenBank:WP_011883004.1;Name=WP_011883004.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009770933.1;locus_tag=LDO38_RS12215;product=50S ribosomal protein L2;protein_id=WP_011883004.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 3307 3582 . + . ID=gene-LDO38_RS12220;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=LDO38_RS12220;old_locus_tag=BVI2075_290006 NZ_CAJZAL010000129.1 Protein Homology CDS 3307 3582 . + 0 ID=cds-WP_004199273.1;Parent=gene-LDO38_RS12220;Dbxref=GenBank:WP_004199273.1;Name=WP_004199273.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440478.1;locus_tag=LDO38_RS12220;product=30S ribosomal protein S19;protein_id=WP_004199273.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 3595 3924 . + . ID=gene-LDO38_RS12225;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=LDO38_RS12225;old_locus_tag=BVI2075_290007 NZ_CAJZAL010000129.1 Protein Homology CDS 3595 3924 . + 0 ID=cds-WP_004199272.1;Parent=gene-LDO38_RS12225;Dbxref=GenBank:WP_004199272.1;Name=WP_004199272.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018420150.1;locus_tag=LDO38_RS12225;product=50S ribosomal protein L22;protein_id=WP_004199272.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 3936 4736 . + . ID=gene-LDO38_RS12230;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=LDO38_RS12230;old_locus_tag=BVI2075_290008 NZ_CAJZAL010000129.1 Protein Homology CDS 3936 4736 . + 0 ID=cds-WP_006482899.1;Parent=gene-LDO38_RS12230;Dbxref=GenBank:WP_006482899.1;Name=WP_006482899.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185240.1;locus_tag=LDO38_RS12230;product=30S ribosomal protein S3;protein_id=WP_006482899.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 4739 5155 . + . ID=gene-LDO38_RS12235;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=LDO38_RS12235;old_locus_tag=BVI2075_290009 NZ_CAJZAL010000129.1 Protein Homology CDS 4739 5155 . + 0 ID=cds-WP_006482873.1;Parent=gene-LDO38_RS12235;Dbxref=GenBank:WP_006482873.1;Name=WP_006482873.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013340739.1;locus_tag=LDO38_RS12235;product=50S ribosomal protein L16;protein_id=WP_006482873.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 5165 5359 . + . ID=gene-LDO38_RS12240;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=LDO38_RS12240;old_locus_tag=BVI2075_290010 NZ_CAJZAL010000129.1 Protein Homology CDS 5165 5359 . + 0 ID=cds-WP_006400652.1;Parent=gene-LDO38_RS12240;Dbxref=GenBank:WP_006400652.1;Name=WP_006400652.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199856.1;locus_tag=LDO38_RS12240;product=50S ribosomal protein L29;protein_id=WP_006400652.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 5356 5628 . + . ID=gene-LDO38_RS12245;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=LDO38_RS12245;old_locus_tag=BVI2075_290011 NZ_CAJZAL010000129.1 Protein Homology CDS 5356 5628 . + 0 ID=cds-WP_006752928.1;Parent=gene-LDO38_RS12245;Dbxref=GenBank:WP_006752928.1;Name=WP_006752928.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006998479.1;locus_tag=LDO38_RS12245;product=30S ribosomal protein S17;protein_id=WP_006752928.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 5938 6306 . + . ID=gene-LDO38_RS12250;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=LDO38_RS12250;old_locus_tag=BVI2075_290012 NZ_CAJZAL010000129.1 Protein Homology CDS 5938 6306 . + 0 ID=cds-WP_006752929.1;Parent=gene-LDO38_RS12250;Dbxref=GenBank:WP_006752929.1;Name=WP_006752929.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009124801.1;locus_tag=LDO38_RS12250;product=50S ribosomal protein L14;protein_id=WP_006752929.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 6316 6624 . + . ID=gene-LDO38_RS12255;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=LDO38_RS12255;old_locus_tag=BVI2075_290013 NZ_CAJZAL010000129.1 Protein Homology CDS 6316 6624 . + 0 ID=cds-WP_006477187.1;Parent=gene-LDO38_RS12255;Dbxref=GenBank:WP_006477187.1;Name=WP_006477187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197950.1;locus_tag=LDO38_RS12255;product=50S ribosomal protein L24;protein_id=WP_006477187.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 6641 7180 . + . ID=gene-LDO38_RS12260;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=LDO38_RS12260;old_locus_tag=BVI2075_290014 NZ_CAJZAL010000129.1 Protein Homology CDS 6641 7180 . + 0 ID=cds-WP_011883005.1;Parent=gene-LDO38_RS12260;Dbxref=GenBank:WP_011883005.1;Name=WP_011883005.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007875323.1;locus_tag=LDO38_RS12260;product=50S ribosomal protein L5;protein_id=WP_011883005.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 7188 7493 . + . ID=gene-LDO38_RS12265;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=LDO38_RS12265;old_locus_tag=BVI2075_290015 NZ_CAJZAL010000129.1 Protein Homology CDS 7188 7493 . + 0 ID=cds-WP_011883006.1;Parent=gene-LDO38_RS12265;Dbxref=GenBank:WP_011883006.1;Name=WP_011883006.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197948.1;locus_tag=LDO38_RS12265;product=30S ribosomal protein S14;protein_id=WP_011883006.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 7508 7903 . + . ID=gene-LDO38_RS12270;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=LDO38_RS12270;old_locus_tag=BVI2075_290016 NZ_CAJZAL010000129.1 Protein Homology CDS 7508 7903 . + 0 ID=cds-WP_006477185.1;Parent=gene-LDO38_RS12270;Dbxref=GenBank:WP_006477185.1;Name=WP_006477185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011799763.1;locus_tag=LDO38_RS12270;product=30S ribosomal protein S8;protein_id=WP_006477185.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 7922 8452 . + . ID=gene-LDO38_RS12275;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=LDO38_RS12275;old_locus_tag=BVI2075_290017 NZ_CAJZAL010000129.1 Protein Homology CDS 7922 8452 . + 0 ID=cds-WP_011883007.1;Parent=gene-LDO38_RS12275;Dbxref=GenBank:WP_011883007.1;Name=WP_011883007.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734367.1;locus_tag=LDO38_RS12275;product=50S ribosomal protein L6;protein_id=WP_011883007.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 8465 8830 . + . ID=gene-LDO38_RS12280;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=LDO38_RS12280;old_locus_tag=BVI2075_290018 NZ_CAJZAL010000129.1 Protein Homology CDS 8465 8830 . + 0 ID=cds-WP_006477183.1;Parent=gene-LDO38_RS12280;Dbxref=GenBank:WP_006477183.1;Name=WP_006477183.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013434799.1;locus_tag=LDO38_RS12280;product=50S ribosomal protein L18;protein_id=WP_006477183.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 8846 9364 . + . ID=gene-LDO38_RS12285;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=LDO38_RS12285;old_locus_tag=BVI2075_290019 NZ_CAJZAL010000129.1 Protein Homology CDS 8846 9364 . + 0 ID=cds-WP_006752931.1;Parent=gene-LDO38_RS12285;Dbxref=GenBank:WP_006752931.1;Name=WP_006752931.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011002906.1;locus_tag=LDO38_RS12285;product=30S ribosomal protein S5;protein_id=WP_006752931.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 9380 9562 . + . ID=gene-LDO38_RS12290;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=LDO38_RS12290;old_locus_tag=BVI2075_290020 NZ_CAJZAL010000129.1 Protein Homology CDS 9380 9562 . + 0 ID=cds-WP_006400644.1;Parent=gene-LDO38_RS12290;Dbxref=GenBank:WP_006400644.1;Name=WP_006400644.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006998470.1;locus_tag=LDO38_RS12290;product=50S ribosomal protein L30;protein_id=WP_006400644.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 9589 10023 . + . ID=gene-LDO38_RS12295;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=LDO38_RS12295;old_locus_tag=BVI2075_290021 NZ_CAJZAL010000129.1 Protein Homology CDS 9589 10023 . + 0 ID=cds-WP_006482880.1;Parent=gene-LDO38_RS12295;Dbxref=GenBank:WP_006482880.1;Name=WP_006482880.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197941.1;locus_tag=LDO38_RS12295;product=50S ribosomal protein L15;protein_id=WP_006482880.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 10066 11415 . + . ID=gene-LDO38_RS12300;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=LDO38_RS12300;old_locus_tag=BVI2075_290022 NZ_CAJZAL010000129.1 Protein Homology CDS 10066 11415 . + 0 ID=cds-WP_006400642.1;Parent=gene-LDO38_RS12300;Dbxref=GenBank:WP_006400642.1;Name=WP_006400642.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440464.1;locus_tag=LDO38_RS12300;product=preprotein translocase subunit SecY;protein_id=WP_006400642.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 11425 11643 . + . ID=gene-LDO38_RS12305;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=LDO38_RS12305;old_locus_tag=BVI2075_290023 NZ_CAJZAL010000129.1 Protein Homology CDS 11425 11643 . + 0 ID=cds-WP_004521905.1;Parent=gene-LDO38_RS12305;Dbxref=GenBank:WP_004521905.1;Name=WP_004521905.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018149800.1;locus_tag=LDO38_RS12305;product=translation initiation factor IF-1;protein_id=WP_004521905.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 11664 11780 . + . ID=gene-LDO38_RS12310;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=LDO38_RS12310 NZ_CAJZAL010000129.1 Protein Homology CDS 11664 11780 . + 0 ID=cds-WP_004199844.1;Parent=gene-LDO38_RS12310;Dbxref=GenBank:WP_004199844.1;Name=WP_004199844.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006232360.1;locus_tag=LDO38_RS12310;product=50S ribosomal protein L36;protein_id=WP_004199844.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 11819 12184 . + . ID=gene-LDO38_RS12315;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=LDO38_RS12315;old_locus_tag=BVI2075_290024 NZ_CAJZAL010000129.1 Protein Homology CDS 11819 12184 . + 0 ID=cds-WP_006752933.1;Parent=gene-LDO38_RS12315;Dbxref=GenBank:WP_006752933.1;Name=WP_006752933.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440462.1;locus_tag=LDO38_RS12315;product=30S ribosomal protein S13;protein_id=WP_006752933.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 12213 12614 . + . ID=gene-LDO38_RS12320;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=LDO38_RS12320;old_locus_tag=BVI2075_290025 NZ_CAJZAL010000129.1 Protein Homology CDS 12213 12614 . + 0 ID=cds-WP_004197937.1;Parent=gene-LDO38_RS12320;Dbxref=GenBank:WP_004197937.1;Name=WP_004197937.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106947.1;locus_tag=LDO38_RS12320;product=30S ribosomal protein S11;protein_id=WP_004197937.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 12770 13393 . + . ID=gene-LDO38_RS12325;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=LDO38_RS12325;old_locus_tag=BVI2075_290026 NZ_CAJZAL010000129.1 Protein Homology CDS 12770 13393 . + 0 ID=cds-WP_014722284.1;Parent=gene-LDO38_RS12325;Dbxref=GenBank:WP_014722284.1;Name=WP_014722284.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009888438.1;locus_tag=LDO38_RS12325;product=30S ribosomal protein S4;protein_id=WP_014722284.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 13518 14495 . + . ID=gene-LDO38_RS12330;Name=LDO38_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12330;old_locus_tag=BVI2075_290027 NZ_CAJZAL010000129.1 Protein Homology CDS 13518 14495 . + 0 ID=cds-WP_006477176.1;Parent=gene-LDO38_RS12330;Dbxref=GenBank:WP_006477176.1;Name=WP_006477176.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440459.1;locus_tag=LDO38_RS12330;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_006477176.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 14644 15039 . + . ID=gene-LDO38_RS12335;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=LDO38_RS12335;old_locus_tag=BVI2075_290028 NZ_CAJZAL010000129.1 Protein Homology CDS 14644 15039 . + 0 ID=cds-WP_006477175.1;Parent=gene-LDO38_RS12335;Dbxref=GenBank:WP_006477175.1;Name=WP_006477175.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477175.1;locus_tag=LDO38_RS12335;product=50S ribosomal protein L17;protein_id=WP_006477175.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 15239 15562 . + . ID=gene-LDO38_RS12340;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=LDO38_RS12340;old_locus_tag=BVI2075_290030 NZ_CAJZAL010000129.1 Protein Homology CDS 15239 15562 . + 0 ID=cds-WP_014722285.1;Parent=gene-LDO38_RS12340;Dbxref=GenBank:WP_014722285.1;Name=WP_014722285.1;Ontology_term=GO:0010038;gbkey=CDS;gene=cutA;go_process=response to metal ion|0010038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722285.1;locus_tag=LDO38_RS12340;product=divalent-cation tolerance protein CutA;protein_id=WP_014722285.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 15555 17399 . + . ID=gene-LDO38_RS12345;Name=dsbD;gbkey=Gene;gene=dsbD;gene_biotype=protein_coding;locus_tag=LDO38_RS12345;old_locus_tag=BVI2075_290031 NZ_CAJZAL010000129.1 Protein Homology CDS 15555 17399 . + 0 ID=cds-WP_045578593.1;Parent=gene-LDO38_RS12345;Dbxref=GenBank:WP_045578593.1;Name=WP_045578593.1;Ontology_term=GO:0047134;gbkey=CDS;gene=dsbD;go_function=protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327751.1;locus_tag=LDO38_RS12345;product=protein-disulfide reductase DsbD;protein_id=WP_045578593.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 17500 18498 . - . ID=gene-LDO38_RS12350;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=LDO38_RS12350;old_locus_tag=BVI2075_290032 NZ_CAJZAL010000129.1 Protein Homology CDS 17500 18498 . - 0 ID=cds-WP_011883011.1;Parent=gene-LDO38_RS12350;Dbxref=GenBank:WP_011883011.1;Name=WP_011883011.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898350.1;locus_tag=LDO38_RS12350;product=porphobilinogen synthase;protein_id=WP_011883011.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 18753 19412 . - . ID=gene-LDO38_RS12355;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=LDO38_RS12355;old_locus_tag=BVI2075_290033 NZ_CAJZAL010000129.1 Protein Homology CDS 18753 19412 . - 0 ID=cds-WP_011883012.1;Parent=gene-LDO38_RS12355;Dbxref=GenBank:WP_011883012.1;Name=WP_011883012.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350683.1;locus_tag=LDO38_RS12355;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_011883012.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 19631 20284 . + . ID=gene-LDO38_RS12360;Name=LDO38_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12360;old_locus_tag=BVI2075_290034 NZ_CAJZAL010000129.1 Protein Homology CDS 19631 20284 . + 0 ID=cds-WP_011883013.1;Parent=gene-LDO38_RS12360;Dbxref=GenBank:WP_011883013.1;Name=WP_011883013.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492295.1;locus_tag=LDO38_RS12360;product=c-type cytochrome;protein_id=WP_011883013.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 20407 22623 . + . ID=gene-LDO38_RS12365;Name=LDO38_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12365;old_locus_tag=BVI2075_290035 NZ_CAJZAL010000129.1 Protein Homology CDS 20407 22623 . + 0 ID=cds-WP_014722288.1;Parent=gene-LDO38_RS12365;Dbxref=GenBank:WP_014722288.1;Name=WP_014722288.1;Ontology_term=GO:0017004,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883014.1;locus_tag=LDO38_RS12365;product=cytochrome c biogenesis protein ResB;protein_id=WP_014722288.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 22628 23818 . + . ID=gene-LDO38_RS12370;Name=ccsB;gbkey=Gene;gene=ccsB;gene_biotype=protein_coding;locus_tag=LDO38_RS12370;old_locus_tag=BVI2075_290036 NZ_CAJZAL010000129.1 Protein Homology CDS 22628 23818 . + 0 ID=cds-WP_011883015.1;Parent=gene-LDO38_RS12370;Dbxref=GenBank:WP_011883015.1;Name=WP_011883015.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsB;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655767.1;locus_tag=LDO38_RS12370;product=c-type cytochrome biogenesis protein CcsB;protein_id=WP_011883015.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 23978 24973 . + . ID=gene-LDO38_RS12375;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=LDO38_RS12375;old_locus_tag=BVI2075_290038 NZ_CAJZAL010000129.1 Protein Homology CDS 23978 24973 . + 0 ID=cds-WP_043291629.1;Parent=gene-LDO38_RS12375;Dbxref=GenBank:WP_043291629.1;Name=WP_043291629.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009913838.1;locus_tag=LDO38_RS12375;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_043291629.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 24997 25689 . + . ID=gene-LDO38_RS12380;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=LDO38_RS12380;old_locus_tag=BVI2075_290039 NZ_CAJZAL010000129.1 Protein Homology CDS 24997 25689 . + 0 ID=cds-WP_060044699.1;Parent=gene-LDO38_RS12380;Dbxref=GenBank:WP_060044699.1;Name=WP_060044699.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494453.1;locus_tag=LDO38_RS12380;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_060044699.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 25788 26069 . - . ID=gene-LDO38_RS12385;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=LDO38_RS12385;old_locus_tag=BVI2075_290040 NZ_CAJZAL010000129.1 Protein Homology CDS 25788 26069 . - 0 ID=cds-WP_059456300.1;Parent=gene-LDO38_RS12385;Dbxref=GenBank:WP_059456300.1;Name=WP_059456300.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758797.1;locus_tag=LDO38_RS12385;product=LPS translocon maturation chaperone LptM;protein_id=WP_059456300.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 26106 26432 . + . ID=gene-LDO38_RS12390;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=LDO38_RS12390;old_locus_tag=BVI2075_290041 NZ_CAJZAL010000129.1 Protein Homology CDS 26106 26432 . + 0 ID=cds-WP_011883019.1;Parent=gene-LDO38_RS12390;Dbxref=GenBank:WP_011883019.1;Name=WP_011883019.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196764.1;locus_tag=LDO38_RS12390;product=iron donor protein CyaY;protein_id=WP_011883019.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 26507 28894 . - . ID=gene-LDO38_RS12395;Name=LDO38_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12395;old_locus_tag=BVI2075_290042 NZ_CAJZAL010000129.1 Protein Homology CDS 26507 28894 . - 0 ID=cds-WP_131753402.1;Parent=gene-LDO38_RS12395;Dbxref=GenBank:WP_131753402.1;Name=WP_131753402.1;Ontology_term=GO:0006508,GO:0009252,GO:0008658,GO:0008955,GO:0009002;gbkey=CDS;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898342.1;locus_tag=LDO38_RS12395;product=penicillin-binding protein 1A;protein_id=WP_131753402.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 29121 30044 . + . ID=gene-LDO38_RS12400;Name=LDO38_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12400;old_locus_tag=BVI2075_290043 NZ_CAJZAL010000129.1 Protein Homology CDS 29121 30044 . + 0 ID=cds-WP_059668560.1;Parent=gene-LDO38_RS12400;Dbxref=GenBank:WP_059668560.1;Name=WP_059668560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655772.1;locus_tag=LDO38_RS12400;product=hypothetical protein;protein_id=WP_059668560.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 30053 30676 . + . ID=gene-LDO38_RS12405;Name=LDO38_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12405;old_locus_tag=BVI2075_290044 NZ_CAJZAL010000129.1 Protein Homology CDS 30053 30676 . + 0 ID=cds-WP_060044712.1;Parent=gene-LDO38_RS12405;Dbxref=GenBank:WP_060044712.1;Name=WP_060044712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722295.1;locus_tag=LDO38_RS12405;product=hypothetical protein;protein_id=WP_060044712.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 30673 31542 . + . ID=gene-LDO38_RS12410;Name=LDO38_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12410;old_locus_tag=BVI2075_290045 NZ_CAJZAL010000129.1 Protein Homology CDS 30673 31542 . + 0 ID=cds-WP_060044700.1;Parent=gene-LDO38_RS12410;Dbxref=GenBank:WP_060044700.1;Name=WP_060044700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754854.1;locus_tag=LDO38_RS12410;product=hypothetical protein;protein_id=WP_060044700.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 31539 33212 . + . ID=gene-LDO38_RS12415;Name=LDO38_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12415;old_locus_tag=BVI2075_290046 NZ_CAJZAL010000129.1 Protein Homology CDS 31539 33212 . + 0 ID=cds-WP_224056455.1;Parent=gene-LDO38_RS12415;Dbxref=GenBank:WP_224056455.1;Name=WP_224056455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362906.1;locus_tag=LDO38_RS12415;product=type IV pilus secretin PilQ;protein_id=WP_224056455.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 33253 33807 . + . ID=gene-LDO38_RS12420;Name=LDO38_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12420;old_locus_tag=BVI2075_290047 NZ_CAJZAL010000129.1 Protein Homology CDS 33253 33807 . + 0 ID=cds-WP_011883025.1;Parent=gene-LDO38_RS12420;Dbxref=GenBank:WP_011883025.1;Name=WP_011883025.1;Ontology_term=GO:0008652,GO:0009073,GO:0000287,GO:0004765,GO:0005524;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,shikimate kinase activity|0004765||IEA,ATP binding|0005524||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492299.1;locus_tag=LDO38_RS12420;product=shikimate kinase;protein_id=WP_011883025.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 33804 34883 . + . ID=gene-LDO38_RS12425;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=LDO38_RS12425;old_locus_tag=BVI2075_290048 NZ_CAJZAL010000129.1 Protein Homology CDS 33804 34883 . + 0 ID=cds-WP_014722299.1;Parent=gene-LDO38_RS12425;Dbxref=GenBank:WP_014722299.1;Name=WP_014722299.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004545609.1;locus_tag=LDO38_RS12425;product=3-dehydroquinate synthase;protein_id=WP_014722299.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 34925 36133 . + . ID=gene-LDO38_RS12430;Name=LDO38_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12430;old_locus_tag=BVI2075_290049 NZ_CAJZAL010000129.1 Protein Homology CDS 34925 36133 . + 0 ID=cds-WP_011883027.1;Parent=gene-LDO38_RS12430;Dbxref=GenBank:WP_011883027.1;Name=WP_011883027.1;Ontology_term=GO:0016793;gbkey=CDS;go_function=triphosphoric monoester hydrolase activity|0016793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411276.1;locus_tag=LDO38_RS12430;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=WP_011883027.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 36224 37558 . + . ID=gene-LDO38_RS12435;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=LDO38_RS12435;old_locus_tag=BVI2075_290050 NZ_CAJZAL010000129.1 Protein Homology CDS 36224 37558 . + 0 ID=cds-WP_011883028.1;Parent=gene-LDO38_RS12435;Dbxref=GenBank:WP_011883028.1;Name=WP_011883028.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407003.1;locus_tag=LDO38_RS12435;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_011883028.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 37656 38540 . + . ID=gene-LDO38_RS12440;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=LDO38_RS12440;old_locus_tag=BVI2075_290052 NZ_CAJZAL010000129.1 Protein Homology CDS 37656 38540 . + 0 ID=cds-WP_011883029.1;Parent=gene-LDO38_RS12440;Dbxref=GenBank:WP_011883029.1;Name=WP_011883029.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906395.1;locus_tag=LDO38_RS12440;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_011883029.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 38537 39382 . + . ID=gene-LDO38_RS12445;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=LDO38_RS12445;old_locus_tag=BVI2075_290053 NZ_CAJZAL010000129.1 Protein Homology CDS 38537 39382 . + 0 ID=cds-WP_224056456.1;Parent=gene-LDO38_RS12445;Dbxref=GenBank:WP_224056456.1;Name=WP_224056456.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477155.1;locus_tag=LDO38_RS12445;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_224056456.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 39415 40500 . + . ID=gene-LDO38_RS12450;Name=LDO38_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12450;old_locus_tag=BVI2075_290054 NZ_CAJZAL010000129.1 Protein Homology CDS 39415 40500 . + 0 ID=cds-WP_011883031.1;Parent=gene-LDO38_RS12450;Dbxref=GenBank:WP_011883031.1;Name=WP_011883031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004547598.1;locus_tag=LDO38_RS12450;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_011883031.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 40536 41300 . + . ID=gene-LDO38_RS12455;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=LDO38_RS12455;old_locus_tag=BVI2075_290056 NZ_CAJZAL010000129.1 Protein Homology CDS 40536 41300 . + 0 ID=cds-WP_224056457.1;Parent=gene-LDO38_RS12455;Dbxref=GenBank:WP_224056457.1;Name=WP_224056457.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883032.1;locus_tag=LDO38_RS12455;product=glycerophosphodiester phosphodiesterase;protein_id=WP_224056457.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 41469 42200 . - . ID=gene-LDO38_RS12460;Name=LDO38_RS12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12460;old_locus_tag=BVI2075_290057 NZ_CAJZAL010000129.1 Protein Homology CDS 41469 42200 . - 0 ID=cds-WP_011883033.1;Parent=gene-LDO38_RS12460;Dbxref=GenBank:WP_011883033.1;Name=WP_011883033.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350702.1;locus_tag=LDO38_RS12460;product=OmpW/AlkL family protein;protein_id=WP_011883033.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 42393 43106 . + . ID=gene-LDO38_RS12465;Name=LDO38_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12465;old_locus_tag=BVI2075_290058 NZ_CAJZAL010000129.1 Protein Homology CDS 42393 43106 . + 0 ID=cds-WP_034194003.1;Parent=gene-LDO38_RS12465;Dbxref=GenBank:WP_034194003.1;Name=WP_034194003.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898328.1;locus_tag=LDO38_RS12465;product=transposase;protein_id=WP_034194003.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 43398 48101 . + . ID=gene-LDO38_RS12470;Name=LDO38_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12470;old_locus_tag=BVI2075_290059 NZ_CAJZAL010000129.1 Protein Homology CDS 43398 48101 . + 0 ID=cds-WP_060091963.1;Parent=gene-LDO38_RS12470;Dbxref=GenBank:WP_060091963.1;Name=WP_060091963.1;Ontology_term=GO:0006537,GO:0015930,GO:0016638;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;go_process=glutamate biosynthetic process|0006537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477150.1;locus_tag=LDO38_RS12470;product=glutamate synthase-related protein;protein_id=WP_060091963.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 48187 49653 . + . ID=gene-LDO38_RS12475;Name=LDO38_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12475;old_locus_tag=BVI2075_290060 NZ_CAJZAL010000129.1 Protein Homology CDS 48187 49653 . + 0 ID=cds-WP_011883036.1;Parent=gene-LDO38_RS12475;Dbxref=GenBank:WP_011883036.1;Name=WP_011883036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016346426.1;locus_tag=LDO38_RS12475;product=glutamate synthase subunit beta;protein_id=WP_011883036.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 49929 50171 . + . ID=gene-LDO38_RS12480;Name=LDO38_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12480;old_locus_tag=BVI2075_290061 NZ_CAJZAL010000129.1 GeneMarkS-2+ CDS 49929 50171 . + 0 ID=cds-WP_043290718.1;Parent=gene-LDO38_RS12480;Dbxref=GenBank:WP_043290718.1;Name=WP_043290718.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS12480;product=hypothetical protein;protein_id=WP_043290718.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 50168 50722 . + . ID=gene-LDO38_RS12485;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=LDO38_RS12485;old_locus_tag=BVI2075_290062 NZ_CAJZAL010000129.1 Protein Homology CDS 50168 50722 . + 0 ID=cds-WP_034194001.1;Parent=gene-LDO38_RS12485;Dbxref=GenBank:WP_034194001.1;Name=WP_034194001.1;Ontology_term=GO:0008033,GO:0008664;gbkey=CDS;gene=thpR;go_function=RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722303.1;locus_tag=LDO38_RS12485;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_034194001.1;transl_table=11 NZ_CAJZAL010000129.1 RefSeq gene 50835 52601 . - . ID=gene-LDO38_RS12490;Name=LDO38_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12490;old_locus_tag=BVI2075_290063 NZ_CAJZAL010000129.1 Protein Homology CDS 50835 52601 . - 0 ID=cds-WP_059463948.1;Parent=gene-LDO38_RS12490;Dbxref=GenBank:WP_059463948.1;Name=WP_059463948.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400601.1;locus_tag=LDO38_RS12490;product=ABC transporter ATP-binding protein/permease;protein_id=WP_059463948.1;transl_table=11 NZ_CAJZAL010000129.1 cmsearch riboswitch 52871 52993 . + . ID=id-NZ_CAJZAL010000129.1:52871..52993;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAL010000129.1 RefSeq gene 53228 53589 . + . ID=gene-LDO38_RS12495;Name=LDO38_RS12495;end_range=53589,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12495;partial=true NZ_CAJZAL010000129.1 Protein Homology CDS 53228 53589 . + 0 ID=cds-WP_224056458.1;Parent=gene-LDO38_RS12495;Dbxref=GenBank:WP_224056458.1;Name=WP_224056458.1;Ontology_term=GO:0016491;end_range=53589,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722306.1;locus_tag=LDO38_RS12495;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_224056458.1;transl_table=11 ##sequence-region NZ_CAJZAL010000130.1 1 35124 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000130.1 RefSeq region 1 35124 . + . ID=NZ_CAJZAL010000130.1:1..35124;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_3 NZ_CAJZAL010000130.1 RefSeq pseudogene 1 196 . - . ID=gene-LDO38_RS12500;Name=LDO38_RS12500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS12500;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000130.1 Protein Homology CDS 1 196 . - 0 ID=cds-LDO38_RS12500;Parent=gene-LDO38_RS12500;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880981.1;locus_tag=LDO38_RS12500;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 824 1006 . - . ID=gene-LDO38_RS12505;Name=LDO38_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12505;old_locus_tag=BVI2075_30003 NZ_CAJZAL010000130.1 Protein Homology CDS 824 1006 . - 0 ID=cds-WP_011880983.1;Parent=gene-LDO38_RS12505;Dbxref=GenBank:WP_011880983.1;Name=WP_011880983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755831.1;locus_tag=LDO38_RS12505;product=hypothetical protein;protein_id=WP_011880983.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 1261 1680 . - . ID=gene-LDO38_RS12510;Name=LDO38_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12510;old_locus_tag=BVI2075_30005 NZ_CAJZAL010000130.1 Protein Homology CDS 1261 1680 . - 0 ID=cds-WP_011880984.1;Parent=gene-LDO38_RS12510;Dbxref=GenBank:WP_011880984.1;Name=WP_011880984.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485763.1;locus_tag=LDO38_RS12510;product=HIT family protein;protein_id=WP_011880984.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 1933 3339 . + . ID=gene-LDO38_RS12515;Name=LDO38_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12515;old_locus_tag=BVI2075_30004 NZ_CAJZAL010000130.1 Protein Homology CDS 1933 3339 . + 0 ID=cds-WP_045577640.1;Parent=gene-LDO38_RS12515;Dbxref=GenBank:WP_045577640.1;Name=WP_045577640.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548974.1;locus_tag=LDO38_RS12515;product=serine hydrolase domain-containing protein;protein_id=WP_045577640.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 3392 4015 . - . ID=gene-LDO38_RS12520;Name=LDO38_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12520;old_locus_tag=BVI2075_30006 NZ_CAJZAL010000130.1 Protein Homology CDS 3392 4015 . - 0 ID=cds-WP_045577639.1;Parent=gene-LDO38_RS12520;Dbxref=GenBank:WP_045577639.1;Name=WP_045577639.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010117595.1;locus_tag=LDO38_RS12520;product=glutathione S-transferase family protein;protein_id=WP_045577639.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 4328 5530 . + . ID=gene-LDO38_RS12525;Name=fabV;gbkey=Gene;gene=fabV;gene_biotype=protein_coding;locus_tag=LDO38_RS12525;old_locus_tag=BVI2075_30007 NZ_CAJZAL010000130.1 Protein Homology CDS 4328 5530 . + 0 ID=cds-WP_014724132.1;Parent=gene-LDO38_RS12525;Dbxref=GenBank:WP_014724132.1;Name=WP_014724132.1;Ontology_term=GO:0006633,GO:0004318;gbkey=CDS;gene=fabV;go_function=enoyl-[acyl-carrier-protein] reductase (NADH) activity|0004318||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397317.1;locus_tag=LDO38_RS12525;product=enoyl-ACP reductase FabV;protein_id=WP_014724132.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 5616 6194 . - . ID=gene-LDO38_RS12530;Name=LDO38_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12530;old_locus_tag=BVI2075_30008 NZ_CAJZAL010000130.1 Protein Homology CDS 5616 6194 . - 0 ID=cds-WP_034193383.1;Parent=gene-LDO38_RS12530;Dbxref=GenBank:WP_034193383.1;Name=WP_034193383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750631.1;locus_tag=LDO38_RS12530;product=membrane protein;protein_id=WP_034193383.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 6307 7092 . - . ID=gene-LDO38_RS12535;Name=LDO38_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12535;old_locus_tag=BVI2075_30010 NZ_CAJZAL010000130.1 Protein Homology CDS 6307 7092 . - 0 ID=cds-WP_045577637.1;Parent=gene-LDO38_RS12535;Dbxref=GenBank:WP_045577637.1;Name=WP_045577637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900879.1;locus_tag=LDO38_RS12535;product=YhfC family intramembrane metalloprotease;protein_id=WP_045577637.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 7150 7683 . - . ID=gene-LDO38_RS12540;Name=LDO38_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12540;old_locus_tag=BVI2075_30011 NZ_CAJZAL010000130.1 Protein Homology CDS 7150 7683 . - 0 ID=cds-WP_046425037.1;Parent=gene-LDO38_RS12540;Dbxref=GenBank:WP_046425037.1;Name=WP_046425037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880989.1;locus_tag=LDO38_RS12540;product=GNAT family N-acetyltransferase;protein_id=WP_046425037.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 8165 8641 . + . ID=gene-LDO38_RS12545;Name=LDO38_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12545;old_locus_tag=BVI2075_30012 NZ_CAJZAL010000130.1 Protein Homology CDS 8165 8641 . + 0 ID=cds-WP_011880990.1;Parent=gene-LDO38_RS12545;Dbxref=GenBank:WP_011880990.1;Name=WP_011880990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900875.1;locus_tag=LDO38_RS12545;product=SRPBCC family protein;protein_id=WP_011880990.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 8778 9416 . + . ID=gene-LDO38_RS12550;Name=LDO38_RS12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12550;old_locus_tag=BVI2075_30013 NZ_CAJZAL010000130.1 Protein Homology CDS 8778 9416 . + 0 ID=cds-WP_034193385.1;Parent=gene-LDO38_RS12550;Dbxref=GenBank:WP_034193385.1;Name=WP_034193385.1;Ontology_term=GO:1901170,GO:0018845,GO:0043295;gbkey=CDS;go_function=2-hydroxychromene-2-carboxylate isomerase activity|0018845||IEA,glutathione binding|0043295||IEA;go_process=naphthalene catabolic process|1901170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367019.1;locus_tag=LDO38_RS12550;product=2-hydroxychromene-2-carboxylate isomerase;protein_id=WP_034193385.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 9432 10415 . - . ID=gene-LDO38_RS12555;Name=LDO38_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12555;old_locus_tag=BVI2075_30014 NZ_CAJZAL010000130.1 Protein Homology CDS 9432 10415 . - 0 ID=cds-WP_059475302.1;Parent=gene-LDO38_RS12555;Dbxref=GenBank:WP_059475302.1;Name=WP_059475302.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880992.1;locus_tag=LDO38_RS12555;product=LysR family transcriptional regulator;protein_id=WP_059475302.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 10516 11748 . + . ID=gene-LDO38_RS12560;Name=LDO38_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12560;old_locus_tag=BVI2075_30015 NZ_CAJZAL010000130.1 Protein Homology CDS 10516 11748 . + 0 ID=cds-WP_069224804.1;Parent=gene-LDO38_RS12560;Dbxref=GenBank:WP_069224804.1;Name=WP_069224804.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750642.1;locus_tag=LDO38_RS12560;product=MFS transporter;protein_id=WP_069224804.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 12175 12870 . + . ID=gene-LDO38_RS12565;Name=LDO38_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12565;old_locus_tag=BVI2075_30016 NZ_CAJZAL010000130.1 Protein Homology CDS 12175 12870 . + 0 ID=cds-WP_034193386.1;Parent=gene-LDO38_RS12565;Dbxref=GenBank:WP_034193386.1;Name=WP_034193386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750643.1;locus_tag=LDO38_RS12565;product=phosphatase PAP2 family protein;protein_id=WP_034193386.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 13163 14233 . - . ID=gene-LDO38_RS12575;Name=LDO38_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12575;old_locus_tag=BVI2075_30017 NZ_CAJZAL010000130.1 Protein Homology CDS 13163 14233 . - 0 ID=cds-WP_011880995.1;Parent=gene-LDO38_RS12575;Dbxref=GenBank:WP_011880995.1;Name=WP_011880995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367024.1;locus_tag=LDO38_RS12575;product=rhodanese-like domain-containing protein;protein_id=WP_011880995.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 14446 15354 . + . ID=gene-LDO38_RS12580;Name=LDO38_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12580;old_locus_tag=BVI2075_30018 NZ_CAJZAL010000130.1 Protein Homology CDS 14446 15354 . + 0 ID=cds-WP_060122080.1;Parent=gene-LDO38_RS12580;Dbxref=GenBank:WP_060122080.1;Name=WP_060122080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724140.1;locus_tag=LDO38_RS12580;product=HTH-type transcriptional regulator ArgP;protein_id=WP_060122080.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 15486 16499 . - . ID=gene-LDO38_RS12585;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=LDO38_RS12585;old_locus_tag=BVI2075_30019 NZ_CAJZAL010000130.1 Protein Homology CDS 15486 16499 . - 0 ID=cds-WP_224056459.1;Parent=gene-LDO38_RS12585;Dbxref=GenBank:WP_224056459.1;Name=WP_224056459.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880997.1;locus_tag=LDO38_RS12585;product=low-specificity L-threonine aldolase;protein_id=WP_224056459.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 16890 18311 . + . ID=gene-LDO38_RS12590;Name=LDO38_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12590;old_locus_tag=BVI2075_30020 NZ_CAJZAL010000130.1 Protein Homology CDS 16890 18311 . + 0 ID=cds-WP_011880998.1;Parent=gene-LDO38_RS12590;Dbxref=GenBank:WP_011880998.1;Name=WP_011880998.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900865.1;locus_tag=LDO38_RS12590;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_011880998.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 18340 19347 . + . ID=gene-LDO38_RS12595;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=LDO38_RS12595;old_locus_tag=BVI2075_30021 NZ_CAJZAL010000130.1 Protein Homology CDS 18340 19347 . + 0 ID=cds-WP_011880999.1;Parent=gene-LDO38_RS12595;Dbxref=GenBank:WP_011880999.1;Name=WP_011880999.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548943.1;locus_tag=LDO38_RS12595;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_011880999.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 19319 19498 . + . ID=gene-LDO38_RS12600;Name=LDO38_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12600;old_locus_tag=BVI2075_30022 NZ_CAJZAL010000130.1 Protein Homology CDS 19319 19498 . + 0 ID=cds-WP_011881000.1;Parent=gene-LDO38_RS12600;Dbxref=GenBank:WP_011881000.1;Name=WP_011881000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493604.1;locus_tag=LDO38_RS12600;product=hypothetical protein;protein_id=WP_011881000.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 19684 20139 . - . ID=gene-LDO38_RS12605;Name=LDO38_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12605;old_locus_tag=BVI2075_30023 NZ_CAJZAL010000130.1 Protein Homology CDS 19684 20139 . - 0 ID=cds-WP_106919422.1;Parent=gene-LDO38_RS12605;Dbxref=GenBank:WP_106919422.1;Name=WP_106919422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013212276.1;locus_tag=LDO38_RS12605;product=TIGR00725 family protein;protein_id=WP_106919422.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 20210 21040 . - . ID=gene-LDO38_RS12610;Name=LDO38_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12610;old_locus_tag=BVI2075_30024 NZ_CAJZAL010000130.1 Protein Homology CDS 20210 21040 . - 0 ID=cds-WP_011881002.1;Parent=gene-LDO38_RS12610;Dbxref=GenBank:WP_011881002.1;Name=WP_011881002.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694880.1;locus_tag=LDO38_RS12610;product=ABC transporter permease;protein_id=WP_011881002.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 21051 22139 . - . ID=gene-LDO38_RS12615;Name=LDO38_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12615;old_locus_tag=BVI2075_30025 NZ_CAJZAL010000130.1 Protein Homology CDS 21051 22139 . - 0 ID=cds-WP_011881003.1;Parent=gene-LDO38_RS12615;Dbxref=GenBank:WP_011881003.1;Name=WP_011881003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724145.1;locus_tag=LDO38_RS12615;product=extracellular solute-binding protein;protein_id=WP_011881003.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 22166 23218 . - . ID=gene-LDO38_RS12620;Name=LDO38_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12620;old_locus_tag=BVI2075_30026 NZ_CAJZAL010000130.1 Protein Homology CDS 22166 23218 . - 0 ID=cds-WP_059460640.1;Parent=gene-LDO38_RS12620;Dbxref=GenBank:WP_059460640.1;Name=WP_059460640.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881004.1;locus_tag=LDO38_RS12620;product=ABC transporter ATP-binding protein;protein_id=WP_059460640.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 23226 24077 . - . ID=gene-LDO38_RS12625;Name=LDO38_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12625;old_locus_tag=BVI2075_30027 NZ_CAJZAL010000130.1 Protein Homology CDS 23226 24077 . - 0 ID=cds-WP_034193392.1;Parent=gene-LDO38_RS12625;Dbxref=GenBank:WP_034193392.1;Name=WP_034193392.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724147.1;locus_tag=LDO38_RS12625;product=ABC transporter permease;protein_id=WP_034193392.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 24239 25135 . + . ID=gene-LDO38_RS12630;Name=LDO38_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12630;old_locus_tag=BVI2075_30028 NZ_CAJZAL010000130.1 Protein Homology CDS 24239 25135 . + 0 ID=cds-WP_014724148.1;Parent=gene-LDO38_RS12630;Dbxref=GenBank:WP_014724148.1;Name=WP_014724148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881006.1;locus_tag=LDO38_RS12630;product=LysR substrate-binding domain-containing protein;protein_id=WP_014724148.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 25244 26902 . - . ID=gene-LDO38_RS12635;Name=LDO38_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12635;old_locus_tag=BVI2075_30030 NZ_CAJZAL010000130.1 Protein Homology CDS 25244 26902 . - 0 ID=cds-WP_224056460.1;Parent=gene-LDO38_RS12635;Dbxref=GenBank:WP_224056460.1;Name=WP_224056460.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487965.1;locus_tag=LDO38_RS12635;product=alkaline phosphatase family protein;protein_id=WP_224056460.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 27154 27375 . + . ID=gene-LDO38_RS12640;Name=LDO38_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12640;old_locus_tag=BVI2075_30031 NZ_CAJZAL010000130.1 Protein Homology CDS 27154 27375 . + 0 ID=cds-WP_011881008.1;Parent=gene-LDO38_RS12640;Dbxref=GenBank:WP_011881008.1;Name=WP_011881008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659770.1;locus_tag=LDO38_RS12640;product=hypothetical protein;protein_id=WP_011881008.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 27451 31329 . - . ID=gene-LDO38_RS12645;Name=LDO38_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12645;old_locus_tag=BVI2075_30032 NZ_CAJZAL010000130.1 Protein Homology CDS 27451 31329 . - 0 ID=cds-WP_224056461.1;Parent=gene-LDO38_RS12645;Dbxref=GenBank:WP_224056461.1;Name=WP_224056461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548932.1;locus_tag=LDO38_RS12645;product=DUF748 domain-containing protein;protein_id=WP_224056461.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 31482 32921 . - . ID=gene-LDO38_RS12650;Name=LDO38_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12650;old_locus_tag=BVI2075_30033 NZ_CAJZAL010000130.1 Protein Homology CDS 31482 32921 . - 0 ID=cds-WP_014724152.1;Parent=gene-LDO38_RS12650;Dbxref=GenBank:WP_014724152.1;Name=WP_014724152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538828.1;locus_tag=LDO38_RS12650;product=DUF1254 domain-containing protein;protein_id=WP_014724152.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 33236 33830 . + . ID=gene-LDO38_RS30530;Name=LDO38_RS30530;end_range=33830,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30530;old_locus_tag=BVI2075_30034;partial=true NZ_CAJZAL010000130.1 Protein Homology CDS 33236 33830 . + 0 ID=cds-WP_435520943.1;Parent=gene-LDO38_RS30530;Dbxref=GenBank:WP_435520943.1;Name=WP_435520943.1;Ontology_term=GO:0005507;end_range=33830,.;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494365.1;locus_tag=LDO38_RS30530;partial=true;product=copper ion binding protein;protein_id=WP_435520943.1;transl_table=11 NZ_CAJZAL010000130.1 RefSeq gene 33841 35124 . + . ID=gene-LDO38_RS12655;Name=LDO38_RS12655;end_range=35124,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12655;partial=true;start_range=.,33841 NZ_CAJZAL010000130.1 Protein Homology CDS 33841 35124 . + 2 ID=cds-WP_435520944.1;Parent=gene-LDO38_RS12655;Dbxref=GenBank:WP_435520944.1;Name=WP_435520944.1;Ontology_term=GO:0006812,GO:0042625,GO:0016020;end_range=35124,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled ion transmembrane transporter activity|0042625||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004556478.1;locus_tag=LDO38_RS12655;partial=true;product=heavy metal translocating P-type ATPase;protein_id=WP_435520944.1;start_range=.,33841;transl_table=11 ##sequence-region NZ_CAJZAL010000131.1 1 46929 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000131.1 RefSeq region 1 46929 . + . ID=NZ_CAJZAL010000131.1:1..46929;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_30 NZ_CAJZAL010000131.1 RefSeq gene 1 116 . + . ID=gene-LDO38_RS12660;Name=LDO38_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12660;partial=true;start_range=.,1 NZ_CAJZAL010000131.1 Protein Homology CDS 1 116 . + 2 ID=cds-WP_224056466.1;Parent=gene-LDO38_RS12660;Dbxref=GenBank:WP_224056466.1;Name=WP_224056466.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752396.1;locus_tag=LDO38_RS12660;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_224056466.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 138 1349 . - . ID=gene-LDO38_RS12665;Name=LDO38_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12665;old_locus_tag=BVI2075_300002 NZ_CAJZAL010000131.1 Protein Homology CDS 138 1349 . - 0 ID=cds-WP_059739323.1;Parent=gene-LDO38_RS12665;Dbxref=GenBank:WP_059739323.1;Name=WP_059739323.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752395.1;locus_tag=LDO38_RS12665;product=pyridoxal-phosphate-dependent aminotransferase family protein;protein_id=WP_059739323.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 2055 3041 . + . ID=gene-LDO38_RS12670;Name=LDO38_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12670;old_locus_tag=BVI2075_300003 NZ_CAJZAL010000131.1 Protein Homology CDS 2055 3041 . + 0 ID=cds-WP_059894718.1;Parent=gene-LDO38_RS12670;Dbxref=GenBank:WP_059894718.1;Name=WP_059894718.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406377.1;locus_tag=LDO38_RS12670;product=LysR family transcriptional regulator;protein_id=WP_059894718.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 3072 4070 . + . ID=gene-LDO38_RS12675;Name=LDO38_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12675;old_locus_tag=BVI2075_300004 NZ_CAJZAL010000131.1 Protein Homology CDS 3072 4070 . + 0 ID=cds-WP_011883448.1;Parent=gene-LDO38_RS12675;Dbxref=GenBank:WP_011883448.1;Name=WP_011883448.1;Ontology_term=GO:0008720,GO:0070404;gbkey=CDS;go_function=D-lactate dehydrogenase (NAD+) activity|0008720||IEA,NADH binding|0070404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496703.1;locus_tag=LDO38_RS12675;product=2-hydroxyacid dehydrogenase;protein_id=WP_011883448.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 4226 4963 . + . ID=gene-LDO38_RS12680;Name=bluB;gbkey=Gene;gene=bluB;gene_biotype=protein_coding;locus_tag=LDO38_RS12680;old_locus_tag=BVI2075_300005 NZ_CAJZAL010000131.1 Protein Homology CDS 4226 4963 . + 0 ID=cds-WP_046426247.1;Parent=gene-LDO38_RS12680;Dbxref=GenBank:WP_046426247.1;Name=WP_046426247.1;Ontology_term=GO:0009236,GO:0032363,GO:0016722;gbkey=CDS;gene=bluB;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,FMN catabolic process|0032363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883447.1;locus_tag=LDO38_RS12680;product=5%2C6-dimethylbenzimidazole synthase;protein_id=WP_046426247.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 5373 6542 . + . ID=gene-LDO38_RS12685;Name=LDO38_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12685;old_locus_tag=BVI2075_300006 NZ_CAJZAL010000131.1 Protein Homology CDS 5373 6542 . + 0 ID=cds-WP_224056462.1;Parent=gene-LDO38_RS12685;Dbxref=GenBank:WP_224056462.1;Name=WP_224056462.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544698.1;locus_tag=LDO38_RS12685;product=MFS transporter;protein_id=WP_224056462.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq pseudogene 6661 7816 . + . ID=gene-LDO38_RS12690;Name=LDO38_RS12690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS12690;old_locus_tag=BVI2075_300007;pseudo=true NZ_CAJZAL010000131.1 Protein Homology CDS 6661 7816 . + 0 ID=cds-LDO38_RS12690;Parent=gene-LDO38_RS12690;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765053.1;locus_tag=LDO38_RS12690;product=MFS transporter;pseudo=true;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 8084 9388 . - . ID=gene-LDO38_RS12695;Name=fahA;gbkey=Gene;gene=fahA;gene_biotype=protein_coding;locus_tag=LDO38_RS12695;old_locus_tag=BVI2075_300009 NZ_CAJZAL010000131.1 Protein Homology CDS 8084 9388 . - 0 ID=cds-WP_059559024.1;Parent=gene-LDO38_RS12695;Dbxref=GenBank:WP_059559024.1;Name=WP_059559024.1;Ontology_term=GO:0006559,GO:0006572,GO:0004334;gbkey=CDS;gene=fahA;go_function=fumarylacetoacetase activity|0004334||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,L-tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214027.1;locus_tag=LDO38_RS12695;product=fumarylacetoacetase;protein_id=WP_059559024.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 9385 10719 . - . ID=gene-LDO38_RS12700;Name=hmgA;gbkey=Gene;gene=hmgA;gene_biotype=protein_coding;locus_tag=LDO38_RS12700;old_locus_tag=BVI2075_300010 NZ_CAJZAL010000131.1 Protein Homology CDS 9385 10719 . - 0 ID=cds-WP_011883439.1;Parent=gene-LDO38_RS12700;Dbxref=GenBank:WP_011883439.1;Name=WP_011883439.1;Ontology_term=GO:0006559,GO:0006572,GO:0004411;gbkey=CDS;gene=hmgA;go_function=homogentisate 1%2C2-dioxygenase activity|0004411||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,L-tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214028.1;locus_tag=LDO38_RS12700;product=homogentisate 1%2C2-dioxygenase;protein_id=WP_011883439.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 10735 12096 . - . ID=gene-LDO38_RS12705;Name=LDO38_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12705;old_locus_tag=BVI2075_300011 NZ_CAJZAL010000131.1 Protein Homology CDS 10735 12096 . - 0 ID=cds-WP_059559026.1;Parent=gene-LDO38_RS12705;Dbxref=GenBank:WP_059559026.1;Name=WP_059559026.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722516.1;locus_tag=LDO38_RS12705;product=MFS transporter;protein_id=WP_059559026.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 12093 12323 . - . ID=gene-LDO38_RS12710;Name=LDO38_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12710;old_locus_tag=BVI2075_300012 NZ_CAJZAL010000131.1 Protein Homology CDS 12093 12323 . - 0 ID=cds-WP_011883434.1;Parent=gene-LDO38_RS12710;Dbxref=GenBank:WP_011883434.1;Name=WP_011883434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476783.1;locus_tag=LDO38_RS12710;product=DUF2783 domain-containing protein;protein_id=WP_011883434.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 12364 14040 . - . ID=gene-LDO38_RS12715;Name=LDO38_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12715;old_locus_tag=BVI2075_300013 NZ_CAJZAL010000131.1 Protein Homology CDS 12364 14040 . - 0 ID=cds-WP_043290810.1;Parent=gene-LDO38_RS12715;Dbxref=GenBank:WP_043290810.1;Name=WP_043290810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722515.1;locus_tag=LDO38_RS12715;product=FAD-dependent oxidoreductase;protein_id=WP_043290810.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 14048 14314 . - . ID=gene-LDO38_RS12720;Name=LDO38_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12720;old_locus_tag=BVI2075_300014 NZ_CAJZAL010000131.1 GeneMarkS-2+ CDS 14048 14314 . - 0 ID=cds-WP_155624736.1;Parent=gene-LDO38_RS12720;Dbxref=GenBank:WP_155624736.1;Name=WP_155624736.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS12720;product=hypothetical protein;protein_id=WP_155624736.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 14443 15246 . + . ID=gene-LDO38_RS12725;Name=LDO38_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12725;old_locus_tag=BVI2075_300016 NZ_CAJZAL010000131.1 Protein Homology CDS 14443 15246 . + 0 ID=cds-WP_011883431.1;Parent=gene-LDO38_RS12725;Dbxref=GenBank:WP_011883431.1;Name=WP_011883431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760627.1;locus_tag=LDO38_RS12725;product=EAL domain-containing protein;protein_id=WP_011883431.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 15790 16200 . - . ID=gene-LDO38_RS12730;Name=LDO38_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12730;old_locus_tag=BVI2075_300017 NZ_CAJZAL010000131.1 Protein Homology CDS 15790 16200 . - 0 ID=cds-WP_045579403.1;Parent=gene-LDO38_RS12730;Dbxref=GenBank:WP_045579403.1;Name=WP_045579403.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476785.1;locus_tag=LDO38_RS12730;product=GFA family protein;protein_id=WP_045579403.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 16326 17117 . - . ID=gene-LDO38_RS12735;Name=LDO38_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12735;old_locus_tag=BVI2075_300018 NZ_CAJZAL010000131.1 Protein Homology CDS 16326 17117 . - 0 ID=cds-WP_011883421.1;Parent=gene-LDO38_RS12735;Dbxref=GenBank:WP_011883421.1;Name=WP_011883421.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760626.1;locus_tag=LDO38_RS12735;product=IclR family transcriptional regulator;protein_id=WP_011883421.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 17240 18427 . + . ID=gene-LDO38_RS12740;Name=LDO38_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12740;old_locus_tag=BVI2075_300019 NZ_CAJZAL010000131.1 Protein Homology CDS 17240 18427 . + 0 ID=cds-WP_011883419.1;Parent=gene-LDO38_RS12740;Dbxref=GenBank:WP_011883419.1;Name=WP_011883419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527638.1;locus_tag=LDO38_RS12740;product=acyl-CoA dehydrogenase;protein_id=WP_011883419.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 18552 19190 . - . ID=gene-LDO38_RS12745;Name=LDO38_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12745;old_locus_tag=BVI2075_300020 NZ_CAJZAL010000131.1 Protein Homology CDS 18552 19190 . - 0 ID=cds-WP_014722511.1;Parent=gene-LDO38_RS12745;Dbxref=GenBank:WP_014722511.1;Name=WP_014722511.1;Ontology_term=GO:0098869,GO:0008379,GO:0051920;gbkey=CDS;go_function=thioredoxin peroxidase activity|0008379||IEA,peroxiredoxin activity|0051920||IEA;go_process=cellular oxidant detoxification|0098869||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003265121.1;locus_tag=LDO38_RS12745;product=peroxiredoxin;protein_id=WP_014722511.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 19508 19810 . + . ID=gene-LDO38_RS12750;Name=LDO38_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12750;old_locus_tag=BVI2075_300021 NZ_CAJZAL010000131.1 Protein Homology CDS 19508 19810 . + 0 ID=cds-WP_011883416.1;Parent=gene-LDO38_RS12750;Dbxref=GenBank:WP_011883416.1;Name=WP_011883416.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883416.1;locus_tag=LDO38_RS12750;product=DUF883 family protein;protein_id=WP_011883416.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 19935 20324 . + . ID=gene-LDO38_RS12755;Name=LDO38_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12755;old_locus_tag=BVI2075_300022 NZ_CAJZAL010000131.1 Protein Homology CDS 19935 20324 . + 0 ID=cds-WP_011883414.1;Parent=gene-LDO38_RS12755;Dbxref=GenBank:WP_011883414.1;Name=WP_011883414.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185460.1;locus_tag=LDO38_RS12755;product=phage holin family protein;protein_id=WP_011883414.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 20368 20811 . + . ID=gene-LDO38_RS12760;Name=LDO38_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12760;old_locus_tag=BVI2075_300023 NZ_CAJZAL010000131.1 Protein Homology CDS 20368 20811 . + 0 ID=cds-WP_011883413.1;Parent=gene-LDO38_RS12760;Dbxref=GenBank:WP_011883413.1;Name=WP_011883413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484985.1;locus_tag=LDO38_RS12760;product=DUF3318 domain-containing protein;protein_id=WP_011883413.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 20864 21316 . - . ID=gene-LDO38_RS12765;Name=LDO38_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12765;old_locus_tag=BVI2075_300024 NZ_CAJZAL010000131.1 Protein Homology CDS 20864 21316 . - 0 ID=cds-WP_041493936.1;Parent=gene-LDO38_RS12765;Dbxref=GenBank:WP_041493936.1;Name=WP_041493936.1;Ontology_term=GO:0043683,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883412.1;locus_tag=LDO38_RS12765;product=type IV pilin protein;protein_id=WP_041493936.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 21316 21774 . - . ID=gene-LDO38_RS12770;Name=LDO38_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12770;old_locus_tag=BVI2075_300025 NZ_CAJZAL010000131.1 Protein Homology CDS 21316 21774 . - 0 ID=cds-WP_011883410.1;Parent=gene-LDO38_RS12770;Dbxref=GenBank:WP_011883410.1;Name=WP_011883410.1;Ontology_term=GO:0043683;gbkey=CDS;go_process=type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722508.1;locus_tag=LDO38_RS12770;product=pilus assembly PilX family protein;protein_id=WP_011883410.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 21972 22805 . - . ID=gene-LDO38_RS12775;Name=LDO38_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12775;old_locus_tag=BVI2075_300026 NZ_CAJZAL010000131.1 Protein Homology CDS 21972 22805 . - 0 ID=cds-WP_014722506.1;Parent=gene-LDO38_RS12775;Dbxref=GenBank:WP_014722506.1;Name=WP_014722506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883409.1;locus_tag=LDO38_RS12775;product=type IV pillus assembly protein;protein_id=WP_014722506.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 22795 23217 . - . ID=gene-LDO38_RS12780;Name=LDO38_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12780;old_locus_tag=BVI2075_300027 NZ_CAJZAL010000131.1 Protein Homology CDS 22795 23217 . - 0 ID=cds-WP_045578510.1;Parent=gene-LDO38_RS12780;Dbxref=GenBank:WP_045578510.1;Name=WP_045578510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417101.1;locus_tag=LDO38_RS12780;product=hypothetical protein;protein_id=WP_045578510.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 23214 23774 . - . ID=gene-LDO38_RS12785;Name=LDO38_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12785;old_locus_tag=BVI2075_300028 NZ_CAJZAL010000131.1 Protein Homology CDS 23214 23774 . - 0 ID=cds-WP_011883405.1;Parent=gene-LDO38_RS12785;Dbxref=GenBank:WP_011883405.1;Name=WP_011883405.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754598.1;locus_tag=LDO38_RS12785;product=GspH/FimT family pseudopilin;protein_id=WP_011883405.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 23946 24425 . - . ID=gene-LDO38_RS12790;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=LDO38_RS12790;old_locus_tag=BVI2075_300029 NZ_CAJZAL010000131.1 Protein Homology CDS 23946 24425 . - 0 ID=cds-WP_006760615.1;Parent=gene-LDO38_RS12790;Dbxref=GenBank:WP_006760615.1;Name=WP_006760615.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476792.1;locus_tag=LDO38_RS12790;product=transcriptional regulator NrdR;protein_id=WP_006760615.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq pseudogene 24432 24937 . - . ID=gene-LDO38_RS12795;Name=glyA;end_range=24937,.;gbkey=Gene;gene=glyA;gene_biotype=pseudogene;locus_tag=LDO38_RS12795;old_locus_tag=BVI2075_300030;partial=true;pseudo=true NZ_CAJZAL010000131.1 Protein Homology CDS 24432 24937 . - 2 ID=cds-LDO38_RS12795;Parent=gene-LDO38_RS12795;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=24937,.;gbkey=CDS;gene=glyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009857411.1;locus_tag=LDO38_RS12795;partial=true;product=serine hydroxymethyltransferase;pseudo=true;transl_table=11 NZ_CAJZAL010000131.1 cmsearch riboswitch 25201 25301 . - . ID=id-NZ_CAJZAL010000131.1:25201..25301;Dbxref=RFAM:RF01750;Note=ZMP/ZTP riboswitches appear to regulate genes involved in one-carbon metabolism;bound_moiety=5-aminoimidazole-4-carboxamide ribonucleotide (ZMP)/ 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-triphosphate (ZMT);gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAL010000131.1 RefSeq gene 25482 26228 . + . ID=gene-LDO38_RS12805;Name=LDO38_RS12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12805;old_locus_tag=BVI2075_300032 NZ_CAJZAL010000131.1 Protein Homology CDS 25482 26228 . + 0 ID=cds-WP_011883400.1;Parent=gene-LDO38_RS12805;Dbxref=GenBank:WP_011883400.1;Name=WP_011883400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696778.1;locus_tag=LDO38_RS12805;product=SDR family oxidoreductase;protein_id=WP_011883400.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 26338 26808 . + . ID=gene-LDO38_RS12810;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=LDO38_RS12810;old_locus_tag=BVI2075_300033 NZ_CAJZAL010000131.1 Protein Homology CDS 26338 26808 . + 0 ID=cds-WP_059605673.1;Parent=gene-LDO38_RS12810;Dbxref=GenBank:WP_059605673.1;Name=WP_059605673.1;Ontology_term=GO:0047617,GO:0005737;gbkey=CDS;gene=ybgC;go_component=cytoplasm|0005737||IEA;go_function=fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091491.1;locus_tag=LDO38_RS12810;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_059605673.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 26942 27619 . + . ID=gene-LDO38_RS12815;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=LDO38_RS12815;old_locus_tag=BVI2075_300034 NZ_CAJZAL010000131.1 Protein Homology CDS 26942 27619 . + 0 ID=cds-WP_011883396.1;Parent=gene-LDO38_RS12815;Dbxref=GenBank:WP_011883396.1;Name=WP_011883396.1;Ontology_term=GO:0043213,GO:0016020;gbkey=CDS;gene=tolQ;go_component=membrane|0016020||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091489.1;locus_tag=LDO38_RS12815;product=protein TolQ;protein_id=WP_011883396.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 27630 28079 . + . ID=gene-LDO38_RS12820;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=LDO38_RS12820;old_locus_tag=BVI2075_300035 NZ_CAJZAL010000131.1 Protein Homology CDS 27630 28079 . + 0 ID=cds-WP_011883394.1;Parent=gene-LDO38_RS12820;Dbxref=GenBank:WP_011883394.1;Name=WP_011883394.1;Ontology_term=GO:0061024,GO:1902600,GO:0015078,GO:0098567;gbkey=CDS;gene=tolR;go_component=periplasmic side of plasma membrane|0098567||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=membrane organization|0061024||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194863.1;locus_tag=LDO38_RS12820;product=protein TolR;protein_id=WP_011883394.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 28076 29143 . + . ID=gene-LDO38_RS12825;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=LDO38_RS12825;old_locus_tag=BVI2075_300036 NZ_CAJZAL010000131.1 Protein Homology CDS 28076 29143 . + 0 ID=cds-WP_034194460.1;Parent=gene-LDO38_RS12825;Dbxref=GenBank:WP_034194460.1;Name=WP_034194460.1;Ontology_term=GO:0006810,GO:0005215,GO:0098567;gbkey=CDS;gene=tolA;go_component=periplasmic side of plasma membrane|0098567||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406396.1;locus_tag=LDO38_RS12825;product=cell envelope integrity protein TolA;protein_id=WP_034194460.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 29253 30548 . + . ID=gene-LDO38_RS12830;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=LDO38_RS12830;old_locus_tag=BVI2075_300037 NZ_CAJZAL010000131.1 Protein Homology CDS 29253 30548 . + 0 ID=cds-WP_011883392.1;Parent=gene-LDO38_RS12830;Dbxref=GenBank:WP_011883392.1;Name=WP_011883392.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351073.1;locus_tag=LDO38_RS12830;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_011883392.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 30568 31080 . + . ID=gene-LDO38_RS12835;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=LDO38_RS12835;old_locus_tag=BVI2075_300038 NZ_CAJZAL010000131.1 Protein Homology CDS 30568 31080 . + 0 ID=cds-WP_011883386.1;Parent=gene-LDO38_RS12835;Dbxref=GenBank:WP_011883386.1;Name=WP_011883386.1;Ontology_term=GO:0009279;gbkey=CDS;gene=pal;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186227.1;locus_tag=LDO38_RS12835;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_011883386.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 31100 31849 . + . ID=gene-LDO38_RS12840;Name=ybgF;gbkey=Gene;gene=ybgF;gene_biotype=protein_coding;locus_tag=LDO38_RS12840;old_locus_tag=BVI2075_300039 NZ_CAJZAL010000131.1 Protein Homology CDS 31100 31849 . + 0 ID=cds-WP_011883385.1;Parent=gene-LDO38_RS12840;Dbxref=GenBank:WP_011883385.1;Name=WP_011883385.1;Ontology_term=GO:0005515;gbkey=CDS;gene=ybgF;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025426.1;locus_tag=LDO38_RS12840;product=tol-pal system protein YbgF;protein_id=WP_011883385.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 31908 31983 . + . ID=gene-LDO38_RS12845;Name=LDO38_RS12845;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS12845;old_locus_tag=BVI2075_TRNA6 NZ_CAJZAL010000131.1 tRNAscan-SE tRNA 31908 31983 . + . ID=rna-LDO38_RS12845;Parent=gene-LDO38_RS12845;anticodon=(pos:31941..31943);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS12845;product=tRNA-Lys NZ_CAJZAL010000131.1 tRNAscan-SE exon 31908 31983 . + . ID=exon-LDO38_RS12845-1;Parent=rna-LDO38_RS12845;anticodon=(pos:31941..31943);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS12845;product=tRNA-Lys NZ_CAJZAL010000131.1 RefSeq gene 32593 32922 . + . ID=gene-LDO38_RS12850;Name=LDO38_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12850;old_locus_tag=BVI2075_300040 NZ_CAJZAL010000131.1 Protein Homology CDS 32593 32922 . + 0 ID=cds-WP_011883382.1;Parent=gene-LDO38_RS12850;Dbxref=GenBank:WP_011883382.1;Name=WP_011883382.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883382.1;locus_tag=LDO38_RS12850;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_011883382.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 33039 33872 . + . ID=gene-LDO38_RS12855;Name=LDO38_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12855;old_locus_tag=BVI2075_300042 NZ_CAJZAL010000131.1 Protein Homology CDS 33039 33872 . + 0 ID=cds-WP_014722496.1;Parent=gene-LDO38_RS12855;Dbxref=GenBank:WP_014722496.1;Name=WP_014722496.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883381.1;locus_tag=LDO38_RS12855;product=class II glutamine amidotransferase;protein_id=WP_014722496.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 34378 34965 . + . ID=gene-LDO38_RS12860;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=LDO38_RS12860;old_locus_tag=BVI2075_300046 NZ_CAJZAL010000131.1 Protein Homology CDS 34378 34965 . + 0 ID=cds-WP_069239017.1;Parent=gene-LDO38_RS12860;Dbxref=GenBank:WP_069239017.1;Name=WP_069239017.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722495.1;locus_tag=LDO38_RS12860;product=adenylyl-sulfate kinase;protein_id=WP_069239017.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 35206 35889 . - . ID=gene-LDO38_RS12865;Name=LDO38_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12865;old_locus_tag=BVI2075_300048 NZ_CAJZAL010000131.1 Protein Homology CDS 35206 35889 . - 0 ID=cds-WP_014722494.1;Parent=gene-LDO38_RS12865;Dbxref=GenBank:WP_014722494.1;Name=WP_014722494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351038.1;locus_tag=LDO38_RS12865;product=DedA family protein;protein_id=WP_014722494.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 36064 38091 . + . ID=gene-LDO38_RS12870;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=LDO38_RS12870;old_locus_tag=BVI2075_300049 NZ_CAJZAL010000131.1 Protein Homology CDS 36064 38091 . + 0 ID=cds-WP_034194459.1;Parent=gene-LDO38_RS12870;Dbxref=GenBank:WP_034194459.1;Name=WP_034194459.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656051.1;locus_tag=LDO38_RS12870;product=DNA mismatch repair endonuclease MutL;protein_id=WP_034194459.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 38088 39062 . + . ID=gene-LDO38_RS12875;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=LDO38_RS12875;old_locus_tag=BVI2075_300050 NZ_CAJZAL010000131.1 Protein Homology CDS 38088 39062 . + 0 ID=cds-WP_069246145.1;Parent=gene-LDO38_RS12875;Dbxref=GenBank:WP_069246145.1;Name=WP_069246145.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883374.1;locus_tag=LDO38_RS12875;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_069246145.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 39089 39469 . - . ID=gene-LDO38_RS12880;Name=LDO38_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12880;old_locus_tag=BVI2075_300051 NZ_CAJZAL010000131.1 Protein Homology CDS 39089 39469 . - 0 ID=cds-WP_011883373.1;Parent=gene-LDO38_RS12880;Dbxref=GenBank:WP_011883373.1;Name=WP_011883373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214072.1;locus_tag=LDO38_RS12880;product=YybH family protein;protein_id=WP_011883373.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 39577 40632 . - . ID=gene-LDO38_RS12885;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=LDO38_RS12885;old_locus_tag=BVI2075_300052 NZ_CAJZAL010000131.1 Protein Homology CDS 39577 40632 . - 0 ID=cds-WP_011883372.1;Parent=gene-LDO38_RS12885;Dbxref=GenBank:WP_011883372.1;Name=WP_011883372.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010116949.1;locus_tag=LDO38_RS12885;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_011883372.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 40883 41617 . + . ID=gene-LDO38_RS12890;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=LDO38_RS12890;old_locus_tag=BVI2075_300053 NZ_CAJZAL010000131.1 Protein Homology CDS 40883 41617 . + 0 ID=cds-WP_011883371.1;Parent=gene-LDO38_RS12890;Dbxref=GenBank:WP_011883371.1;Name=WP_011883371.1;Ontology_term=GO:0032297,GO:0016818;gbkey=CDS;gene=hda;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333268.1;locus_tag=LDO38_RS12890;product=DnaA regulatory inactivator Hda;protein_id=WP_011883371.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 41629 42306 . + . ID=gene-LDO38_RS12895;Name=LDO38_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12895;old_locus_tag=BVI2075_300054 NZ_CAJZAL010000131.1 Protein Homology CDS 41629 42306 . + 0 ID=cds-WP_011883370.1;Parent=gene-LDO38_RS12895;Dbxref=GenBank:WP_011883370.1;Name=WP_011883370.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401594.1;locus_tag=LDO38_RS12895;product=HAD family hydrolase;protein_id=WP_011883370.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 42312 43865 . + . ID=gene-LDO38_RS12900;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=LDO38_RS12900;old_locus_tag=BVI2075_300055 NZ_CAJZAL010000131.1 Protein Homology CDS 42312 43865 . + 0 ID=cds-WP_224056464.1;Parent=gene-LDO38_RS12900;Dbxref=GenBank:WP_224056464.1;Name=WP_224056464.1;Ontology_term=GO:0043633,GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;go_process=polyadenylation-dependent RNA catabolic process|0043633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214075.1;locus_tag=LDO38_RS12900;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_224056464.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 43899 44441 . + . ID=gene-LDO38_RS12905;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=LDO38_RS12905;old_locus_tag=BVI2075_300056 NZ_CAJZAL010000131.1 Protein Homology CDS 43899 44441 . + 0 ID=cds-WP_034194455.1;Parent=gene-LDO38_RS12905;Dbxref=GenBank:WP_034194455.1;Name=WP_034194455.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025371.1;locus_tag=LDO38_RS12905;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_034194455.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 44438 45124 . + . ID=gene-LDO38_RS12910;Name=LDO38_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12910;old_locus_tag=BVI2075_300057 NZ_CAJZAL010000131.1 Protein Homology CDS 44438 45124 . + 0 ID=cds-WP_014722489.1;Parent=gene-LDO38_RS12910;Dbxref=GenBank:WP_014722489.1;Name=WP_014722489.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656042.1;locus_tag=LDO38_RS12910;product=deoxynucleoside kinase;protein_id=WP_014722489.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 45172 45987 . + . ID=gene-LDO38_RS12915;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=LDO38_RS12915;old_locus_tag=BVI2075_300058 NZ_CAJZAL010000131.1 Protein Homology CDS 45172 45987 . + 0 ID=cds-WP_014722488.1;Parent=gene-LDO38_RS12915;Dbxref=GenBank:WP_014722488.1;Name=WP_014722488.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351027.1;locus_tag=LDO38_RS12915;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_014722488.1;transl_table=11 NZ_CAJZAL010000131.1 RefSeq gene 46104 46929 . - . ID=gene-LDO38_RS12920;Name=LDO38_RS12920;end_range=46929,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12920;old_locus_tag=BVI2075_300059;partial=true NZ_CAJZAL010000131.1 Protein Homology CDS 46104 46929 . - 1 ID=cds-WP_224056465.1;Parent=gene-LDO38_RS12920;Dbxref=GenBank:WP_224056465.1;Name=WP_224056465.1;Ontology_term=GO:0003824;end_range=46929,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722487.1;locus_tag=LDO38_RS12920;partial=true;product=aminotransferase class IV;protein_id=WP_224056465.1;transl_table=11 ##sequence-region NZ_CAJZAL010000132.1 1 90510 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000132.1 RefSeq region 1 90510 . + . ID=NZ_CAJZAL010000132.1:1..90510;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_31 NZ_CAJZAL010000132.1 RefSeq gene 173 1120 . - . ID=gene-LDO38_RS12925;Name=LDO38_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12925 NZ_CAJZAL010000132.1 Protein Homology CDS 173 1120 . - 0 ID=cds-WP_072465459.1;Parent=gene-LDO38_RS12925;Dbxref=GenBank:WP_072465459.1;Name=WP_072465459.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372295.1;locus_tag=LDO38_RS12925;product=GlxA family transcriptional regulator;protein_id=WP_072465459.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq pseudogene 1289 1810 . - . ID=gene-LDO38_RS12930;Name=LDO38_RS12930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS12930;partial=true;pseudo=true;start_range=.,1289 NZ_CAJZAL010000132.1 Protein Homology CDS 1289 1810 . - 0 ID=cds-LDO38_RS12930;Parent=gene-LDO38_RS12930;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004552423.1;locus_tag=LDO38_RS12930;partial=true;product=integrase;pseudo=true;start_range=.,1289;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 2238 4688 . + . ID=gene-LDO38_RS12935;Name=LDO38_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12935;old_locus_tag=BVI2075_310005 NZ_CAJZAL010000132.1 Protein Homology CDS 2238 4688 . + 0 ID=cds-WP_011880963.1;Parent=gene-LDO38_RS12935;Dbxref=GenBank:WP_011880963.1;Name=WP_011880963.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012570.6;locus_tag=LDO38_RS12935;product=dynamin family protein;protein_id=WP_011880963.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 4685 5587 . + . ID=gene-LDO38_RS12940;Name=LDO38_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12940;old_locus_tag=BVI2075_310006 NZ_CAJZAL010000132.1 Protein Homology CDS 4685 5587 . + 0 ID=cds-WP_011880962.1;Parent=gene-LDO38_RS12940;Dbxref=GenBank:WP_011880962.1;Name=WP_011880962.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025356.6;locus_tag=LDO38_RS12940;product=diguanylate cyclase regulator RdcB family protein;protein_id=WP_011880962.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 5580 6656 . + . ID=gene-LDO38_RS12945;Name=LDO38_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12945;old_locus_tag=BVI2075_310007 NZ_CAJZAL010000132.1 Protein Homology CDS 5580 6656 . + 0 ID=cds-WP_011880961.1;Parent=gene-LDO38_RS12945;Dbxref=GenBank:WP_011880961.1;Name=WP_011880961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880961.1;locus_tag=LDO38_RS12945;product=patatin-like phospholipase family protein;protein_id=WP_011880961.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq pseudogene 6761 7278 . + . ID=gene-LDO38_RS12950;Name=LDO38_RS12950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS12950;partial=true;pseudo=true;start_range=.,6761 NZ_CAJZAL010000132.1 Protein Homology CDS 6761 7278 . + 0 ID=cds-LDO38_RS12950;Parent=gene-LDO38_RS12950;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612266.1;locus_tag=LDO38_RS12950;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,6761;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 7328 7834 . + . ID=gene-LDO38_RS12955;Name=LDO38_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12955;old_locus_tag=BVI2075_310009 NZ_CAJZAL010000132.1 Protein Homology CDS 7328 7834 . + 0 ID=cds-WP_011880960.1;Parent=gene-LDO38_RS12955;Dbxref=GenBank:WP_011880960.1;Name=WP_011880960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880960.1;locus_tag=LDO38_RS12955;product=hypothetical protein;protein_id=WP_011880960.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 7918 8511 . - . ID=gene-LDO38_RS12960;Name=LDO38_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12960;old_locus_tag=BVI2075_310010 NZ_CAJZAL010000132.1 Protein Homology CDS 7918 8511 . - 0 ID=cds-WP_011880959.1;Parent=gene-LDO38_RS12960;Dbxref=GenBank:WP_011880959.1;Name=WP_011880959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724118.1;locus_tag=LDO38_RS12960;product=hypothetical protein;protein_id=WP_011880959.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 8708 10096 . - . ID=gene-LDO38_RS12965;Name=LDO38_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12965;old_locus_tag=BVI2075_310012 NZ_CAJZAL010000132.1 Protein Homology CDS 8708 10096 . - 0 ID=cds-WP_069246408.1;Parent=gene-LDO38_RS12965;Dbxref=GenBank:WP_069246408.1;Name=WP_069246408.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757206.1;locus_tag=LDO38_RS12965;product=NCS2 family permease;protein_id=WP_069246408.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 10498 11148 . - . ID=gene-LDO38_RS12970;Name=LDO38_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12970;old_locus_tag=BVI2075_310014 NZ_CAJZAL010000132.1 Protein Homology CDS 10498 11148 . - 0 ID=cds-WP_014724114.1;Parent=gene-LDO38_RS12970;Dbxref=GenBank:WP_014724114.1;Name=WP_014724114.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880957.1;locus_tag=LDO38_RS12970;product=TetR family transcriptional regulator;protein_id=WP_014724114.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 11241 11906 . + . ID=gene-LDO38_RS12975;Name=LDO38_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12975;old_locus_tag=BVI2075_310015 NZ_CAJZAL010000132.1 Protein Homology CDS 11241 11906 . + 0 ID=cds-WP_014724113.1;Parent=gene-LDO38_RS12975;Dbxref=GenBank:WP_014724113.1;Name=WP_014724113.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880956.1;locus_tag=LDO38_RS12975;product=O-methyltransferase;protein_id=WP_014724113.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 11944 13059 . - . ID=gene-LDO38_RS12980;Name=LDO38_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12980;old_locus_tag=BVI2075_310016 NZ_CAJZAL010000132.1 Protein Homology CDS 11944 13059 . - 0 ID=cds-WP_046425059.1;Parent=gene-LDO38_RS12980;Dbxref=GenBank:WP_046425059.1;Name=WP_046425059.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216325.1;locus_tag=LDO38_RS12980;product=alkene reductase;protein_id=WP_046425059.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 13124 13930 . - . ID=gene-LDO38_RS12985;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=LDO38_RS12985;old_locus_tag=BVI2075_310017 NZ_CAJZAL010000132.1 Protein Homology CDS 13124 13930 . - 0 ID=cds-WP_059896402.1;Parent=gene-LDO38_RS12985;Dbxref=GenBank:WP_059896402.1;Name=WP_059896402.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366975.1;locus_tag=LDO38_RS12985;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_059896402.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 14052 14996 . - . ID=gene-LDO38_RS12990;Name=LDO38_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12990;old_locus_tag=BVI2075_310018 NZ_CAJZAL010000132.1 Protein Homology CDS 14052 14996 . - 0 ID=cds-WP_014724110.1;Parent=gene-LDO38_RS12990;Dbxref=GenBank:WP_014724110.1;Name=WP_014724110.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724110.1;locus_tag=LDO38_RS12990;product=TIGR03571 family LLM class oxidoreductase;protein_id=WP_014724110.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 15012 15335 . - . ID=gene-LDO38_RS12995;Name=LDO38_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS12995;old_locus_tag=BVI2075_310019 NZ_CAJZAL010000132.1 Protein Homology CDS 15012 15335 . - 0 ID=cds-WP_014724109.1;Parent=gene-LDO38_RS12995;Dbxref=GenBank:WP_014724109.1;Name=WP_014724109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900915.1;locus_tag=LDO38_RS12995;product=MoaF-related domain-containing protein;protein_id=WP_014724109.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 15366 16568 . - . ID=gene-LDO38_RS13000;Name=LDO38_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13000;old_locus_tag=BVI2075_310020 NZ_CAJZAL010000132.1 Protein Homology CDS 15366 16568 . - 0 ID=cds-WP_069246409.1;Parent=gene-LDO38_RS13000;Dbxref=GenBank:WP_069246409.1;Name=WP_069246409.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480404.1;locus_tag=LDO38_RS13000;product=MFS transporter;protein_id=WP_069246409.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 16670 17617 . + . ID=gene-LDO38_RS13005;Name=LDO38_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13005;old_locus_tag=BVI2075_310021 NZ_CAJZAL010000132.1 Protein Homology CDS 16670 17617 . + 0 ID=cds-WP_045577655.1;Parent=gene-LDO38_RS13005;Dbxref=GenBank:WP_045577655.1;Name=WP_045577655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366971.1;locus_tag=LDO38_RS13005;product=LysR family transcriptional regulator;protein_id=WP_045577655.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 17661 19136 . - . ID=gene-LDO38_RS13010;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=LDO38_RS13010;old_locus_tag=BVI2075_310022 NZ_CAJZAL010000132.1 Protein Homology CDS 17661 19136 . - 0 ID=cds-WP_011880949.1;Parent=gene-LDO38_RS13010;Dbxref=GenBank:WP_011880949.1;Name=WP_011880949.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900918.1;locus_tag=LDO38_RS13010;product=glucose-6-phosphate dehydrogenase;protein_id=WP_011880949.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 19341 19919 . + . ID=gene-LDO38_RS13015;Name=LDO38_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13015;old_locus_tag=BVI2075_310023 NZ_CAJZAL010000132.1 Protein Homology CDS 19341 19919 . + 0 ID=cds-WP_034193364.1;Parent=gene-LDO38_RS13015;Dbxref=GenBank:WP_034193364.1;Name=WP_034193364.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366969.1;locus_tag=LDO38_RS13015;product=TetR/AcrR family transcriptional regulator;protein_id=WP_034193364.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 20127 21002 . + . ID=gene-LDO38_RS13020;Name=LDO38_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13020;old_locus_tag=BVI2075_310024 NZ_CAJZAL010000132.1 Protein Homology CDS 20127 21002 . + 0 ID=cds-WP_034193363.1;Parent=gene-LDO38_RS13020;Dbxref=GenBank:WP_034193363.1;Name=WP_034193363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880947.1;locus_tag=LDO38_RS13020;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_034193363.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 21117 21695 . - . ID=gene-LDO38_RS13025;Name=LDO38_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13025;old_locus_tag=BVI2075_310025 NZ_CAJZAL010000132.1 Protein Homology CDS 21117 21695 . - 0 ID=cds-WP_059603049.1;Parent=gene-LDO38_RS13025;Dbxref=GenBank:WP_059603049.1;Name=WP_059603049.1;Note=This protein belongs to a clade of uncharacterized proteins related to peroxidases such as the alkylhydroperoxidase AhpD.;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549018.1;locus_tag=LDO38_RS13025;product=peroxidase-related enzyme;protein_id=WP_059603049.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 21959 23149 . + . ID=gene-LDO38_RS13030;Name=LDO38_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13030;old_locus_tag=BVI2075_310027 NZ_CAJZAL010000132.1 Protein Homology CDS 21959 23149 . + 0 ID=cds-WP_014724102.1;Parent=gene-LDO38_RS13030;Dbxref=GenBank:WP_014724102.1;Name=WP_014724102.1;Ontology_term=GO:0016787,GO:0016810;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757233.1;locus_tag=LDO38_RS13030;product=M20 aminoacylase family protein;protein_id=WP_014724102.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 23205 24536 . + . ID=gene-LDO38_RS13035;Name=LDO38_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13035;old_locus_tag=BVI2075_310028 NZ_CAJZAL010000132.1 Protein Homology CDS 23205 24536 . + 0 ID=cds-WP_045577658.1;Parent=gene-LDO38_RS13035;Dbxref=GenBank:WP_045577658.1;Name=WP_045577658.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757234.1;locus_tag=LDO38_RS13035;product=MFS transporter;protein_id=WP_045577658.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 24633 25421 . - . ID=gene-LDO38_RS13040;Name=LDO38_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13040;old_locus_tag=BVI2075_310029 NZ_CAJZAL010000132.1 Protein Homology CDS 24633 25421 . - 0 ID=cds-WP_014724100.1;Parent=gene-LDO38_RS13040;Dbxref=GenBank:WP_014724100.1;Name=WP_014724100.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010107642.1;locus_tag=LDO38_RS13040;product=IclR family transcriptional regulator;protein_id=WP_014724100.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 25649 26851 . + . ID=gene-LDO38_RS13045;Name=pcaF;gbkey=Gene;gene=pcaF;gene_biotype=protein_coding;locus_tag=LDO38_RS13045;old_locus_tag=BVI2075_310030 NZ_CAJZAL010000132.1 Protein Homology CDS 25649 26851 . + 0 ID=cds-WP_014724098.1;Parent=gene-LDO38_RS13045;Dbxref=GenBank:WP_014724098.1;Name=WP_014724098.1;Ontology_term=GO:0019619,GO:0016747;gbkey=CDS;gene=pcaF;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197326.1;locus_tag=LDO38_RS13045;product=3-oxoadipyl-CoA thiolase;protein_id=WP_014724098.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 26941 27420 . - . ID=gene-LDO38_RS13050;Name=LDO38_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13050;old_locus_tag=BVI2075_310031 NZ_CAJZAL010000132.1 Protein Homology CDS 26941 27420 . - 0 ID=cds-WP_046424053.1;Parent=gene-LDO38_RS13050;Dbxref=GenBank:WP_046424053.1;Name=WP_046424053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366923.1;locus_tag=LDO38_RS13050;product=DUF523 domain-containing protein;protein_id=WP_046424053.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 27795 29339 . + . ID=gene-LDO38_RS13055;Name=LDO38_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13055;old_locus_tag=BVI2075_310033 NZ_CAJZAL010000132.1 Protein Homology CDS 27795 29339 . + 0 ID=cds-WP_124260208.1;Parent=gene-LDO38_RS13055;Dbxref=GenBank:WP_124260208.1;Name=WP_124260208.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659670.1;locus_tag=LDO38_RS13055;product=methyl-accepting chemotaxis protein;protein_id=WP_124260208.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 29739 31283 . + . ID=gene-LDO38_RS13060;Name=LDO38_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13060;old_locus_tag=BVI2075_310034 NZ_CAJZAL010000132.1 Protein Homology CDS 29739 31283 . + 0 ID=cds-WP_011880939.1;Parent=gene-LDO38_RS13060;Dbxref=GenBank:WP_011880939.1;Name=WP_011880939.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659670.1;locus_tag=LDO38_RS13060;product=methyl-accepting chemotaxis protein;protein_id=WP_011880939.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 31407 32870 . - . ID=gene-LDO38_RS13065;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=LDO38_RS13065;old_locus_tag=BVI2075_310035 NZ_CAJZAL010000132.1 Protein Homology CDS 31407 32870 . - 0 ID=cds-WP_011880938.1;Parent=gene-LDO38_RS13065;Dbxref=GenBank:WP_011880938.1;Name=WP_011880938.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331162.1;locus_tag=LDO38_RS13065;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_011880938.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 32948 34231 . - . ID=gene-LDO38_RS13070;Name=LDO38_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13070;old_locus_tag=BVI2075_310036 NZ_CAJZAL010000132.1 Protein Homology CDS 32948 34231 . - 0 ID=cds-WP_011880937.1;Parent=gene-LDO38_RS13070;Dbxref=GenBank:WP_011880937.1;Name=WP_011880937.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603826.1;locus_tag=LDO38_RS13070;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_011880937.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 34358 35866 . + . ID=gene-LDO38_RS13075;Name=LDO38_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13075;old_locus_tag=BVI2075_310037 NZ_CAJZAL010000132.1 Protein Homology CDS 34358 35866 . + 0 ID=cds-WP_011880936.1;Parent=gene-LDO38_RS13075;Dbxref=GenBank:WP_011880936.1;Name=WP_011880936.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724093.1;locus_tag=LDO38_RS13075;product=PLP-dependent aminotransferase family protein;protein_id=WP_011880936.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 36139 37203 . + . ID=gene-LDO38_RS13080;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=LDO38_RS13080;old_locus_tag=BVI2075_310038 NZ_CAJZAL010000132.1 Protein Homology CDS 36139 37203 . + 0 ID=cds-WP_034193359.1;Parent=gene-LDO38_RS13080;Dbxref=GenBank:WP_034193359.1;Name=WP_034193359.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900987.1;locus_tag=LDO38_RS13080;product=selenide%2C water dikinase SelD;protein_id=WP_034193359.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 37379 37969 . + . ID=gene-LDO38_RS13085;Name=LDO38_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13085;old_locus_tag=BVI2075_310039 NZ_CAJZAL010000132.1 Protein Homology CDS 37379 37969 . + 0 ID=cds-WP_059623710.1;Parent=gene-LDO38_RS13085;Dbxref=GenBank:WP_059623710.1;Name=WP_059623710.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406835.1;locus_tag=LDO38_RS13085;product=LysE family translocator;protein_id=WP_059623710.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 38282 39379 . + . ID=gene-LDO38_RS13090;Name=LDO38_RS13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13090;old_locus_tag=BVI2075_310040 NZ_CAJZAL010000132.1 Protein Homology CDS 38282 39379 . + 0 ID=cds-WP_011880933.1;Parent=gene-LDO38_RS13090;Dbxref=GenBank:WP_011880933.1;Name=WP_011880933.1;Ontology_term=GO:0006139,GO:0001882,GO:0002060,GO:0004731,GO:0042301,GO:0042802,GO:0047975;gbkey=CDS;go_function=nucleoside binding|0001882||IEA,purine nucleobase binding|0002060||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,phosphate ion binding|0042301||IEA,identical protein binding|0042802||IEA,guanosine phosphorylase activity|0047975||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188476.1;locus_tag=LDO38_RS13090;product=purine-nucleoside phosphorylase;protein_id=WP_011880933.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 39586 39879 . - . ID=gene-LDO38_RS13095;Name=LDO38_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13095;old_locus_tag=BVI2075_310041 NZ_CAJZAL010000132.1 Protein Homology CDS 39586 39879 . - 0 ID=cds-WP_011880932.1;Parent=gene-LDO38_RS13095;Dbxref=GenBank:WP_011880932.1;Name=WP_011880932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188266.1;locus_tag=LDO38_RS13095;product=DUF4148 domain-containing protein;protein_id=WP_011880932.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 40356 41360 . - . ID=gene-LDO38_RS13100;Name=ceoR;gbkey=Gene;gene=ceoR;gene_biotype=protein_coding;locus_tag=LDO38_RS13100;old_locus_tag=BVI2075_310042 NZ_CAJZAL010000132.1 Protein Homology CDS 40356 41360 . - 0 ID=cds-WP_011880930.1;Parent=gene-LDO38_RS13100;Dbxref=GenBank:WP_011880930.1;Name=WP_011880930.1;gbkey=CDS;gene=ceoR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484497.1;locus_tag=LDO38_RS13100;product=putative multidrug efflux transcriptional regulator CeoR;protein_id=WP_011880930.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 41534 42394 . + . ID=gene-LDO38_RS13105;Name=LDO38_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13105;old_locus_tag=BVI2075_310043 NZ_CAJZAL010000132.1 Protein Homology CDS 41534 42394 . + 0 ID=cds-WP_011880929.1;Parent=gene-LDO38_RS13105;Dbxref=GenBank:WP_011880929.1;Name=WP_011880929.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659656.1;locus_tag=LDO38_RS13105;product=alpha/beta hydrolase;protein_id=WP_011880929.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 42426 43643 . + . ID=gene-LDO38_RS13110;Name=ceoA;gbkey=Gene;gene=ceoA;gene_biotype=protein_coding;locus_tag=LDO38_RS13110;old_locus_tag=BVI2075_310044 NZ_CAJZAL010000132.1 Protein Homology CDS 42426 43643 . + 0 ID=cds-WP_011880928.1;Parent=gene-LDO38_RS13110;Dbxref=GenBank:WP_011880928.1;Name=WP_011880928.1;gbkey=CDS;gene=ceoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484484.1;locus_tag=LDO38_RS13110;product=multidrug efflux RND transporter periplasmic adaptor subunit CeoA;protein_id=WP_011880928.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 43690 46890 . + . ID=gene-LDO38_RS13115;Name=ceoB;gbkey=Gene;gene=ceoB;gene_biotype=protein_coding;locus_tag=LDO38_RS13115;old_locus_tag=BVI2075_310045 NZ_CAJZAL010000132.1 Protein Homology CDS 43690 46890 . + 0 ID=cds-WP_011880927.1;Parent=gene-LDO38_RS13115;Dbxref=GenBank:WP_011880927.1;Name=WP_011880927.1;gbkey=CDS;gene=ceoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_059641583.1;locus_tag=LDO38_RS13115;product=multidrug efflux RND transporter permease subunit CeoB;protein_id=WP_011880927.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 46901 48436 . + . ID=gene-LDO38_RS13120;Name=opcM;gbkey=Gene;gene=opcM;gene_biotype=protein_coding;locus_tag=LDO38_RS13120;old_locus_tag=BVI2075_310046 NZ_CAJZAL010000132.1 Protein Homology CDS 46901 48436 . + 0 ID=cds-WP_014724088.1;Parent=gene-LDO38_RS13120;Dbxref=GenBank:WP_014724088.1;Name=WP_014724088.1;gbkey=CDS;gene=opcM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484479.1;locus_tag=LDO38_RS13120;product=multidrug efflux transporter outer membrane subunit OpcM;protein_id=WP_014724088.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 48887 49249 . + . ID=gene-LDO38_RS13125;Name=LDO38_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13125;old_locus_tag=BVI2075_310047 NZ_CAJZAL010000132.1 Protein Homology CDS 48887 49249 . + 0 ID=cds-WP_034193354.1;Parent=gene-LDO38_RS13125;Dbxref=GenBank:WP_034193354.1;Name=WP_034193354.1;Ontology_term=GO:0019836;gbkey=CDS;go_process=symbiont-mediated hemolysis of host erythrocyte|0019836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876201.1;locus_tag=LDO38_RS13125;product=aegerolysin family protein;protein_id=WP_034193354.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 50042 50893 . - . ID=gene-LDO38_RS13130;Name=LDO38_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13130;old_locus_tag=BVI2075_310049 NZ_CAJZAL010000132.1 Protein Homology CDS 50042 50893 . - 0 ID=cds-WP_014724087.1;Parent=gene-LDO38_RS13130;Dbxref=GenBank:WP_014724087.1;Name=WP_014724087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366906.1;locus_tag=LDO38_RS13130;product=alpha/beta fold hydrolase;protein_id=WP_014724087.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 51157 51378 . - . ID=gene-LDO38_RS13135;Name=LDO38_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13135;old_locus_tag=BVI2075_310050 NZ_CAJZAL010000132.1 Protein Homology CDS 51157 51378 . - 0 ID=cds-WP_011880922.1;Parent=gene-LDO38_RS13135;Dbxref=GenBank:WP_011880922.1;Name=WP_011880922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724086.1;locus_tag=LDO38_RS13135;product=DUF3579 domain-containing protein;protein_id=WP_011880922.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 51395 52756 . - . ID=gene-LDO38_RS13140;Name=LDO38_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13140;old_locus_tag=BVI2075_310051 NZ_CAJZAL010000132.1 Protein Homology CDS 51395 52756 . - 0 ID=cds-WP_011880921.1;Parent=gene-LDO38_RS13140;Dbxref=GenBank:WP_011880921.1;Name=WP_011880921.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677,GO:0005524;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339347.1;locus_tag=LDO38_RS13140;product=sigma-54-dependent transcriptional regulator;protein_id=WP_011880921.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 52746 54632 . - . ID=gene-LDO38_RS13145;Name=LDO38_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13145;old_locus_tag=BVI2075_310052 NZ_CAJZAL010000132.1 Protein Homology CDS 52746 54632 . - 0 ID=cds-WP_224056467.1;Parent=gene-LDO38_RS13145;Dbxref=GenBank:WP_224056467.1;Name=WP_224056467.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724084.1;locus_tag=LDO38_RS13145;product=sensor histidine kinase;protein_id=WP_224056467.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 54818 56182 . - . ID=gene-LDO38_RS13150;Name=LDO38_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13150;old_locus_tag=BVI2075_310053 NZ_CAJZAL010000132.1 Protein Homology CDS 54818 56182 . - 0 ID=cds-WP_034193352.1;Parent=gene-LDO38_RS13150;Dbxref=GenBank:WP_034193352.1;Name=WP_034193352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014901002.1;locus_tag=LDO38_RS13150;product=2-hydroxycarboxylate transporter family protein;protein_id=WP_034193352.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 56614 57444 . + . ID=gene-LDO38_RS13155;Name=LDO38_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13155;old_locus_tag=BVI2075_310054 NZ_CAJZAL010000132.1 Protein Homology CDS 56614 57444 . + 0 ID=cds-WP_011880918.1;Parent=gene-LDO38_RS13155;Dbxref=GenBank:WP_011880918.1;Name=WP_011880918.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216354.1;locus_tag=LDO38_RS13155;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_011880918.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 57455 58873 . + . ID=gene-LDO38_RS13160;Name=LDO38_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13160;old_locus_tag=BVI2075_310055 NZ_CAJZAL010000132.1 Protein Homology CDS 57455 58873 . + 0 ID=cds-WP_059475134.1;Parent=gene-LDO38_RS13160;Dbxref=GenBank:WP_059475134.1;Name=WP_059475134.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480459.1;locus_tag=LDO38_RS13160;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_059475134.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 58892 60070 . + . ID=gene-LDO38_RS13165;Name=LDO38_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13165;old_locus_tag=BVI2075_310056 NZ_CAJZAL010000132.1 Protein Homology CDS 58892 60070 . + 0 ID=cds-WP_045577667.1;Parent=gene-LDO38_RS13165;Dbxref=GenBank:WP_045577667.1;Name=WP_045577667.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216356.1;locus_tag=LDO38_RS13165;product=methionine ABC transporter ATP-binding protein;protein_id=WP_045577667.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 60063 60719 . + . ID=gene-LDO38_RS13170;Name=LDO38_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13170;old_locus_tag=BVI2075_310057 NZ_CAJZAL010000132.1 Protein Homology CDS 60063 60719 . + 0 ID=cds-WP_011880915.1;Parent=gene-LDO38_RS13170;Dbxref=GenBank:WP_011880915.1;Name=WP_011880915.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491339.1;locus_tag=LDO38_RS13170;product=methionine ABC transporter permease;protein_id=WP_011880915.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 60774 61631 . + . ID=gene-LDO38_RS13175;Name=LDO38_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13175;old_locus_tag=BVI2075_310058 NZ_CAJZAL010000132.1 Protein Homology CDS 60774 61631 . + 0 ID=cds-WP_011880914.1;Parent=gene-LDO38_RS13175;Dbxref=GenBank:WP_011880914.1;Name=WP_011880914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366896.1;locus_tag=LDO38_RS13175;product=hypothetical protein;protein_id=WP_011880914.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 61628 62839 . + . ID=gene-LDO38_RS13180;Name=LDO38_RS13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13180;old_locus_tag=BVI2075_310059 NZ_CAJZAL010000132.1 Protein Homology CDS 61628 62839 . + 0 ID=cds-WP_045577668.1;Parent=gene-LDO38_RS13180;Dbxref=GenBank:WP_045577668.1;Name=WP_045577668.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014901008.1;locus_tag=LDO38_RS13180;product=acyl-CoA dehydrogenase family protein;protein_id=WP_045577668.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 63066 63917 . - . ID=gene-LDO38_RS13185;Name=LDO38_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13185;old_locus_tag=BVI2075_310060 NZ_CAJZAL010000132.1 Protein Homology CDS 63066 63917 . - 0 ID=cds-WP_059603030.1;Parent=gene-LDO38_RS13185;Dbxref=GenBank:WP_059603030.1;Name=WP_059603030.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659640.1;locus_tag=LDO38_RS13185;product=helix-turn-helix domain-containing protein;protein_id=WP_059603030.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 64107 65483 . - . ID=gene-LDO38_RS13190;Name=LDO38_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13190;old_locus_tag=BVI2075_310061 NZ_CAJZAL010000132.1 Protein Homology CDS 64107 65483 . - 0 ID=cds-WP_069246413.1;Parent=gene-LDO38_RS13190;Dbxref=GenBank:WP_069246413.1;Name=WP_069246413.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724077.1;locus_tag=LDO38_RS13190;product=MFS transporter;protein_id=WP_069246413.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 65734 67311 . + . ID=gene-LDO38_RS13195;Name=LDO38_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13195;old_locus_tag=BVI2075_310062 NZ_CAJZAL010000132.1 Protein Homology CDS 65734 67311 . + 0 ID=cds-WP_034193348.1;Parent=gene-LDO38_RS13195;Dbxref=GenBank:WP_034193348.1;Name=WP_034193348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406866.1;locus_tag=LDO38_RS13195;product=aldehyde dehydrogenase (NADP(+));protein_id=WP_034193348.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 67615 68529 . - . ID=gene-LDO38_RS13200;Name=kdgD;gbkey=Gene;gene=kdgD;gene_biotype=protein_coding;locus_tag=LDO38_RS13200;old_locus_tag=BVI2075_310063 NZ_CAJZAL010000132.1 Protein Homology CDS 67615 68529 . - 0 ID=cds-WP_011880909.1;Parent=gene-LDO38_RS13200;Dbxref=GenBank:WP_011880909.1;Name=WP_011880909.1;Ontology_term=GO:0016052,GO:0047448;gbkey=CDS;gene=kdgD;go_function=5-dehydro-4-deoxyglucarate dehydratase activity|0047448||IEA;go_process=carbohydrate catabolic process|0016052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094246.1;locus_tag=LDO38_RS13200;product=5-dehydro-4-deoxyglucarate dehydratase;protein_id=WP_011880909.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 68760 70313 . + . ID=gene-LDO38_RS13205;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=LDO38_RS13205;old_locus_tag=BVI2075_310064 NZ_CAJZAL010000132.1 Protein Homology CDS 68760 70313 . + 0 ID=cds-WP_011880908.1;Parent=gene-LDO38_RS13205;Dbxref=GenBank:WP_011880908.1;Name=WP_011880908.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756361.1;locus_tag=LDO38_RS13205;product=galactarate dehydratase;protein_id=WP_011880908.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 70481 70936 . + . ID=gene-LDO38_RS13210;Name=LDO38_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13210;old_locus_tag=BVI2075_310065 NZ_CAJZAL010000132.1 Protein Homology CDS 70481 70936 . + 0 ID=cds-WP_011880907.1;Parent=gene-LDO38_RS13210;Dbxref=GenBank:WP_011880907.1;Name=WP_011880907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353949.1;locus_tag=LDO38_RS13210;product=RbsD/FucU family protein;protein_id=WP_011880907.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 71116 71553 . + . ID=gene-LDO38_RS13215;Name=LDO38_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13215;old_locus_tag=BVI2075_310066 NZ_CAJZAL010000132.1 Protein Homology CDS 71116 71553 . + 0 ID=cds-WP_011880906.1;Parent=gene-LDO38_RS13215;Dbxref=GenBank:WP_011880906.1;Name=WP_011880906.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604064.1;locus_tag=LDO38_RS13215;product=DoxX family protein;protein_id=WP_011880906.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 71675 72985 . - . ID=gene-LDO38_RS13220;Name=LDO38_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13220;old_locus_tag=BVI2075_310067 NZ_CAJZAL010000132.1 Protein Homology CDS 71675 72985 . - 0 ID=cds-WP_014724073.1;Parent=gene-LDO38_RS13220;Dbxref=GenBank:WP_014724073.1;Name=WP_014724073.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494264.1;locus_tag=LDO38_RS13220;product=MFS transporter;protein_id=WP_014724073.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 73310 74446 . - . ID=gene-LDO38_RS13225;Name=LDO38_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13225;old_locus_tag=BVI2075_310068 NZ_CAJZAL010000132.1 Protein Homology CDS 73310 74446 . - 0 ID=cds-WP_011880904.1;Parent=gene-LDO38_RS13225;Dbxref=GenBank:WP_011880904.1;Name=WP_011880904.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406882.1;locus_tag=LDO38_RS13225;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_011880904.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 75297 76091 . + . ID=gene-LDO38_RS13230;Name=LDO38_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13230;old_locus_tag=BVI2075_310070 NZ_CAJZAL010000132.1 Protein Homology CDS 75297 76091 . + 0 ID=cds-WP_045577671.1;Parent=gene-LDO38_RS13230;Dbxref=GenBank:WP_045577671.1;Name=WP_045577671.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880903.1;locus_tag=LDO38_RS13230;product=AraC family transcriptional regulator;protein_id=WP_045577671.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 76165 76428 . - . ID=gene-LDO38_RS13235;Name=LDO38_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13235;old_locus_tag=BVI2075_310071 NZ_CAJZAL010000132.1 Protein Homology CDS 76165 76428 . - 0 ID=cds-WP_011880902.1;Parent=gene-LDO38_RS13235;Dbxref=GenBank:WP_011880902.1;Name=WP_011880902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756354.1;locus_tag=LDO38_RS13235;product=hypothetical protein;protein_id=WP_011880902.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 76734 78626 . - . ID=gene-LDO38_RS13240;Name=LDO38_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13240;old_locus_tag=BVI2075_310072 NZ_CAJZAL010000132.1 Protein Homology CDS 76734 78626 . - 0 ID=cds-WP_059991877.1;Parent=gene-LDO38_RS13240;Dbxref=GenBank:WP_059991877.1;Name=WP_059991877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198724.1;locus_tag=LDO38_RS13240;product=bifunctional sugar phosphate isomerase/epimerase/4-hydroxyphenylpyruvate dioxygenase family protein;protein_id=WP_059991877.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 78880 79335 . + . ID=gene-LDO38_RS13245;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=LDO38_RS13245;old_locus_tag=BVI2075_310074 NZ_CAJZAL010000132.1 Protein Homology CDS 78880 79335 . + 0 ID=cds-WP_011880900.1;Parent=gene-LDO38_RS13245;Dbxref=GenBank:WP_011880900.1;Name=WP_011880900.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216377.1;locus_tag=LDO38_RS13245;product=type II 3-dehydroquinate dehydratase;protein_id=WP_011880900.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 79332 80186 . + . ID=gene-LDO38_RS13250;Name=LDO38_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13250;old_locus_tag=BVI2075_310073 NZ_CAJZAL010000132.1 Protein Homology CDS 79332 80186 . + 0 ID=cds-WP_014724070.1;Parent=gene-LDO38_RS13250;Dbxref=GenBank:WP_014724070.1;Name=WP_014724070.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602966.1;locus_tag=LDO38_RS13250;product=shikimate dehydrogenase;protein_id=WP_014724070.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 80230 81564 . + . ID=gene-LDO38_RS13255;Name=LDO38_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13255;old_locus_tag=BVI2075_310075 NZ_CAJZAL010000132.1 Protein Homology CDS 80230 81564 . + 0 ID=cds-WP_011880898.1;Parent=gene-LDO38_RS13255;Dbxref=GenBank:WP_011880898.1;Name=WP_011880898.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480491.1;locus_tag=LDO38_RS13255;product=MFS transporter;protein_id=WP_011880898.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 81654 82763 . - . ID=gene-LDO38_RS13260;Name=LDO38_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13260;old_locus_tag=BVI2075_310076 NZ_CAJZAL010000132.1 Protein Homology CDS 81654 82763 . - 0 ID=cds-WP_069246414.1;Parent=gene-LDO38_RS13260;Dbxref=GenBank:WP_069246414.1;Name=WP_069246414.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546896.1;locus_tag=LDO38_RS13260;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_069246414.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 83018 84109 . + . ID=gene-LDO38_RS13265;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=LDO38_RS13265;old_locus_tag=BVI2075_310077 NZ_CAJZAL010000132.1 Protein Homology CDS 83018 84109 . + 0 ID=cds-WP_011880896.1;Parent=gene-LDO38_RS13265;Dbxref=GenBank:WP_011880896.1;Name=WP_011880896.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=phnS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406893.1;locus_tag=LDO38_RS13265;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WP_011880896.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 84144 85247 . + . ID=gene-LDO38_RS13270;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=LDO38_RS13270;old_locus_tag=BVI2075_310078 NZ_CAJZAL010000132.1 Protein Homology CDS 84144 85247 . + 0 ID=cds-WP_059475493.1;Parent=gene-LDO38_RS13270;Dbxref=GenBank:WP_059475493.1;Name=WP_059475493.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014901035.1;locus_tag=LDO38_RS13270;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WP_059475493.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 85225 86145 . + . ID=gene-LDO38_RS13275;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=protein_coding;locus_tag=LDO38_RS13275;old_locus_tag=BVI2075_310079 NZ_CAJZAL010000132.1 Protein Homology CDS 85225 86145 . + 0 ID=cds-WP_059603018.1;Parent=gene-LDO38_RS13275;Dbxref=GenBank:WP_059603018.1;Name=WP_059603018.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnU;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414767.1;locus_tag=LDO38_RS13275;product=2-aminoethylphosphonate ABC transporter permease subunit;protein_id=WP_059603018.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 86135 86995 . + . ID=gene-LDO38_RS13280;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=LDO38_RS13280;old_locus_tag=BVI2075_310080 NZ_CAJZAL010000132.1 Protein Homology CDS 86135 86995 . + 0 ID=cds-WP_011880893.1;Parent=gene-LDO38_RS13280;Dbxref=GenBank:WP_011880893.1;Name=WP_011880893.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnV;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756345.1;locus_tag=LDO38_RS13280;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WP_011880893.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 86992 88302 . + . ID=gene-LDO38_RS13285;Name=phnA;gbkey=Gene;gene=phnA;gene_biotype=protein_coding;locus_tag=LDO38_RS13285;old_locus_tag=BVI2075_310081 NZ_CAJZAL010000132.1 Protein Homology CDS 86992 88302 . + 0 ID=cds-WP_060082406.1;Parent=gene-LDO38_RS13285;Dbxref=GenBank:WP_060082406.1;Name=WP_060082406.1;Ontology_term=GO:0019636,GO:0047400;gbkey=CDS;gene=phnA;go_function=phosphonoacetate hydrolase activity|0047400||IEA;go_process=phosphonoacetate metabolic process|0019636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546901.1;locus_tag=LDO38_RS13285;product=phosphonoacetate hydrolase;protein_id=WP_060082406.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 88299 89753 . + . ID=gene-LDO38_RS13290;Name=phnY;gbkey=Gene;gene=phnY;gene_biotype=protein_coding;locus_tag=LDO38_RS13290;old_locus_tag=BVI2075_310082 NZ_CAJZAL010000132.1 Protein Homology CDS 88299 89753 . + 0 ID=cds-WP_045577677.1;Parent=gene-LDO38_RS13290;Dbxref=GenBank:WP_045577677.1;Name=WP_045577677.1;gbkey=CDS;gene=phnY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406897.1;locus_tag=LDO38_RS13290;product=phosphonoacetaldehyde dehydrogenase;protein_id=WP_045577677.1;transl_table=11 NZ_CAJZAL010000132.1 RefSeq gene 89758 90309 . + . ID=gene-LDO38_RS13295;Name=LDO38_RS13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13295;old_locus_tag=BVI2075_310083 NZ_CAJZAL010000132.1 Protein Homology CDS 89758 90309 . + 0 ID=cds-WP_034193339.1;Parent=gene-LDO38_RS13295;Dbxref=GenBank:WP_034193339.1;Name=WP_034193339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216384.1;locus_tag=LDO38_RS13295;product=phosphonate degradation HD-domain oxygenase;protein_id=WP_034193339.1;transl_table=11 ##sequence-region NZ_CAJZAL010000133.1 1 317937 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000133.1 RefSeq region 1 317937 . + . ID=NZ_CAJZAL010000133.1:1..317937;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_32 NZ_CAJZAL010000133.1 RefSeq gene 1 8623 . - . ID=gene-LDO38_RS13300;Name=LDO38_RS13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13300;partial=true;start_range=.,1 NZ_CAJZAL010000133.1 Protein Homology CDS 1 8623 . - 0 ID=cds-WP_224056468.1;Parent=gene-LDO38_RS13300;Dbxref=GenBank:WP_224056468.1;Name=WP_224056468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014251324.1;locus_tag=LDO38_RS13300;partial=true;product=hemagglutinin repeat-containing protein;protein_id=WP_224056468.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq pseudogene 8661 8720 . - . ID=gene-LDO38_RS30180;Name=LDO38_RS30180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30180;partial=true;pseudo=true;start_range=.,8661 NZ_CAJZAL010000133.1 Protein Homology CDS 8661 8720 . - 0 ID=cds-LDO38_RS30180;Parent=gene-LDO38_RS30180;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024418.6;locus_tag=LDO38_RS30180;partial=true;product=ESPR-type extended signal peptide-containing protein;pseudo=true;start_range=.,8661;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 9392 10411 . + . ID=gene-LDO38_RS13310;Name=LDO38_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13310;old_locus_tag=BVI2075_320003 NZ_CAJZAL010000133.1 Protein Homology CDS 9392 10411 . + 0 ID=cds-WP_080484403.1;Parent=gene-LDO38_RS13310;Dbxref=GenBank:WP_080484403.1;Name=WP_080484403.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_080484403.1;locus_tag=LDO38_RS13310;product=IS30 family transposase;protein_id=WP_080484403.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 11275 11595 . + . ID=gene-LDO38_RS13315;Name=LDO38_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13315;old_locus_tag=BVI2075_320005 NZ_CAJZAL010000133.1 Protein Homology CDS 11275 11595 . + 0 ID=cds-WP_011881331.1;Parent=gene-LDO38_RS13315;Dbxref=GenBank:WP_011881331.1;Name=WP_011881331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900369.1;locus_tag=LDO38_RS13315;product=DNA-binding protein;protein_id=WP_011881331.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 11918 12238 . + . ID=gene-LDO38_RS13320;Name=LDO38_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13320;old_locus_tag=BVI2075_320006 NZ_CAJZAL010000133.1 Protein Homology CDS 11918 12238 . + 0 ID=cds-WP_045578281.1;Parent=gene-LDO38_RS13320;Dbxref=GenBank:WP_045578281.1;Name=WP_045578281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724414.1;locus_tag=LDO38_RS13320;product=DUF1330 domain-containing protein;protein_id=WP_045578281.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 12259 13095 . - . ID=gene-LDO38_RS13325;Name=LDO38_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13325;old_locus_tag=BVI2075_320007 NZ_CAJZAL010000133.1 Protein Homology CDS 12259 13095 . - 0 ID=cds-WP_011881329.1;Parent=gene-LDO38_RS13325;Dbxref=GenBank:WP_011881329.1;Name=WP_011881329.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495775.1;locus_tag=LDO38_RS13325;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_011881329.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 13322 14314 . + . ID=gene-LDO38_RS13330;Name=LDO38_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13330;old_locus_tag=BVI2075_320008 NZ_CAJZAL010000133.1 Protein Homology CDS 13322 14314 . + 0 ID=cds-WP_011881328.1;Parent=gene-LDO38_RS13330;Dbxref=GenBank:WP_011881328.1;Name=WP_011881328.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881328.1;locus_tag=LDO38_RS13330;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_011881328.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 14680 15972 . - . ID=gene-LDO38_RS13335;Name=LDO38_RS13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13335;old_locus_tag=BVI2075_320009 NZ_CAJZAL010000133.1 Protein Homology CDS 14680 15972 . - 0 ID=cds-WP_046425861.1;Parent=gene-LDO38_RS13335;Dbxref=GenBank:WP_046425861.1;Name=WP_046425861.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749560.1;locus_tag=LDO38_RS13335;product=MFS transporter;protein_id=WP_046425861.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 16551 17087 . + . ID=gene-LDO38_RS13340;Name=LDO38_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13340;old_locus_tag=BVI2075_320010 NZ_CAJZAL010000133.1 Protein Homology CDS 16551 17087 . + 0 ID=cds-WP_059475672.1;Parent=gene-LDO38_RS13340;Dbxref=GenBank:WP_059475672.1;Name=WP_059475672.1;Ontology_term=GO:0006281,GO:0032259,GO:0003677,GO:0003908,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495779.1;locus_tag=LDO38_RS13340;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_059475672.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 17122 17619 . - . ID=gene-LDO38_RS13345;Name=LDO38_RS13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13345;old_locus_tag=BVI2075_320011 NZ_CAJZAL010000133.1 Protein Homology CDS 17122 17619 . - 0 ID=cds-WP_011881324.1;Parent=gene-LDO38_RS13345;Dbxref=GenBank:WP_011881324.1;Name=WP_011881324.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724410.1;locus_tag=LDO38_RS13345;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011881324.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 17776 19605 . + . ID=gene-LDO38_RS13350;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LDO38_RS13350;old_locus_tag=BVI2075_320012 NZ_CAJZAL010000133.1 Protein Homology CDS 17776 19605 . + 0 ID=cds-WP_059668439.1;Parent=gene-LDO38_RS13350;Dbxref=GenBank:WP_059668439.1;Name=WP_059668439.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330587.1;locus_tag=LDO38_RS13350;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_059668439.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 19849 20445 . + . ID=gene-LDO38_RS13355;Name=LDO38_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13355;old_locus_tag=BVI2075_320013 NZ_CAJZAL010000133.1 Protein Homology CDS 19849 20445 . + 0 ID=cds-WP_172820453.1;Parent=gene-LDO38_RS13355;Dbxref=GenBank:WP_172820453.1;Name=WP_172820453.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881322.1;locus_tag=LDO38_RS13355;product=LemA family protein;protein_id=WP_172820453.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 20448 21287 . + . ID=gene-LDO38_RS13360;Name=LDO38_RS13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13360;old_locus_tag=BVI2075_320014 NZ_CAJZAL010000133.1 Protein Homology CDS 20448 21287 . + 0 ID=cds-WP_371464454.1;Parent=gene-LDO38_RS13360;Dbxref=GenBank:WP_371464454.1;Name=WP_371464454.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881321.1;locus_tag=LDO38_RS13360;product=TPM domain-containing protein;protein_id=WP_371464454.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 21290 21787 . + . ID=gene-LDO38_RS13365;Name=LDO38_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13365;old_locus_tag=BVI2075_320015 NZ_CAJZAL010000133.1 Protein Homology CDS 21290 21787 . + 0 ID=cds-WP_011881320.1;Parent=gene-LDO38_RS13365;Dbxref=GenBank:WP_011881320.1;Name=WP_011881320.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601221.1;locus_tag=LDO38_RS13365;product=TPM domain-containing protein;protein_id=WP_011881320.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 21944 22348 . + . ID=gene-LDO38_RS13370;Name=LDO38_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13370 NZ_CAJZAL010000133.1 Protein Homology CDS 21944 22348 . + 0 ID=cds-WP_069240590.1;Parent=gene-LDO38_RS13370;Dbxref=GenBank:WP_069240590.1;Name=WP_069240590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010108068.1;locus_tag=LDO38_RS13370;product=hypothetical protein;protein_id=WP_069240590.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 22721 24178 . + . ID=gene-LDO38_RS13380;Name=LDO38_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13380;old_locus_tag=BVI2075_320017 NZ_CAJZAL010000133.1 Protein Homology CDS 22721 24178 . + 0 ID=cds-WP_059463889.1;Parent=gene-LDO38_RS13380;Dbxref=GenBank:WP_059463889.1;Name=WP_059463889.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881318.1;locus_tag=LDO38_RS13380;product=TolC family protein;protein_id=WP_059463889.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 24180 25475 . + . ID=gene-LDO38_RS13385;Name=LDO38_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13385;old_locus_tag=BVI2075_320018 NZ_CAJZAL010000133.1 Protein Homology CDS 24180 25475 . + 0 ID=cds-WP_131753995.1;Parent=gene-LDO38_RS13385;Dbxref=GenBank:WP_131753995.1;Name=WP_131753995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006046700.1;locus_tag=LDO38_RS13385;product=multicopper oxidase family protein;protein_id=WP_131753995.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 25542 25889 . + . ID=gene-LDO38_RS13390;Name=LDO38_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13390;old_locus_tag=BVI2075_320019 NZ_CAJZAL010000133.1 Protein Homology CDS 25542 25889 . + 0 ID=cds-WP_011881316.1;Parent=gene-LDO38_RS13390;Dbxref=GenBank:WP_011881316.1;Name=WP_011881316.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881316.1;locus_tag=LDO38_RS13390;product=copper-binding protein;protein_id=WP_011881316.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 25950 26324 . + . ID=gene-LDO38_RS13395;Name=copC;gbkey=Gene;gene=copC;gene_biotype=protein_coding;locus_tag=LDO38_RS13395;old_locus_tag=BVI2075_320020 NZ_CAJZAL010000133.1 Protein Homology CDS 25950 26324 . + 0 ID=cds-WP_034194859.1;Parent=gene-LDO38_RS13395;Dbxref=GenBank:WP_034194859.1;Name=WP_034194859.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507,GO:0042597;gbkey=CDS;gene=copC;go_component=periplasmic space|0042597||IEA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007589565.1;locus_tag=LDO38_RS13395;product=copper homeostasis periplasmic binding protein CopC;protein_id=WP_034194859.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 26324 27265 . + . ID=gene-LDO38_RS13400;Name=LDO38_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13400;old_locus_tag=BVI2075_320021 NZ_CAJZAL010000133.1 Protein Homology CDS 26324 27265 . + 0 ID=cds-WP_059735855.1;Parent=gene-LDO38_RS13400;Dbxref=GenBank:WP_059735855.1;Name=WP_059735855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009901086.1;locus_tag=LDO38_RS13400;product=copper resistance D family protein;protein_id=WP_059735855.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 27451 27852 . + . ID=gene-LDO38_RS13405;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=LDO38_RS13405;old_locus_tag=BVI2075_320022 NZ_CAJZAL010000133.1 Protein Homology CDS 27451 27852 . + 0 ID=cds-WP_034194857.1;Parent=gene-LDO38_RS13405;Dbxref=GenBank:WP_034194857.1;Name=WP_034194857.1;Ontology_term=GO:0045893,GO:0046688,GO:0003677,GO:0003700,GO:0005507;gbkey=CDS;gene=cueR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,copper ion binding|0005507||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724400.1;locus_tag=LDO38_RS13405;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_034194857.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 27928 30372 . + . ID=gene-LDO38_RS13410;Name=LDO38_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13410;old_locus_tag=BVI2075_320023 NZ_CAJZAL010000133.1 Protein Homology CDS 27928 30372 . + 0 ID=cds-WP_224056469.1;Parent=gene-LDO38_RS13410;Dbxref=GenBank:WP_224056469.1;Name=WP_224056469.1;Ontology_term=GO:0006812,GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0042626,GO:0046872,GO:0140358,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,P-type transmembrane transporter activity|0140358||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881312.1;locus_tag=LDO38_RS13410;product=heavy metal translocating P-type ATPase;protein_id=WP_224056469.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 30500 31372 . - . ID=gene-LDO38_RS13415;Name=LDO38_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13415;old_locus_tag=BVI2075_320026 NZ_CAJZAL010000133.1 Protein Homology CDS 30500 31372 . - 0 ID=cds-WP_011881311.1;Parent=gene-LDO38_RS13415;Dbxref=GenBank:WP_011881311.1;Name=WP_011881311.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881311.1;locus_tag=LDO38_RS13415;product=LysR family transcriptional regulator;protein_id=WP_011881311.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 31493 31924 . + . ID=gene-LDO38_RS13420;Name=LDO38_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13420;old_locus_tag=BVI2075_320027 NZ_CAJZAL010000133.1 Protein Homology CDS 31493 31924 . + 0 ID=cds-WP_011881310.1;Parent=gene-LDO38_RS13420;Dbxref=GenBank:WP_011881310.1;Name=WP_011881310.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881310.1;locus_tag=LDO38_RS13420;product=DoxX family protein;protein_id=WP_011881310.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 31942 32631 . + . ID=gene-LDO38_RS13425;Name=LDO38_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13425;old_locus_tag=BVI2075_320028 NZ_CAJZAL010000133.1 Protein Homology CDS 31942 32631 . + 0 ID=cds-WP_069239903.1;Parent=gene-LDO38_RS13425;Dbxref=GenBank:WP_069239903.1;Name=WP_069239903.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881309.1;locus_tag=LDO38_RS13425;product=glutathione S-transferase family protein;protein_id=WP_069239903.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 33228 33743 . + . ID=gene-LDO38_RS13430;Name=LDO38_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13430;old_locus_tag=BVI2075_320030 NZ_CAJZAL010000133.1 Protein Homology CDS 33228 33743 . + 0 ID=cds-WP_224056470.1;Parent=gene-LDO38_RS13430;Dbxref=GenBank:WP_224056470.1;Name=WP_224056470.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724394.1;locus_tag=LDO38_RS13430;product=TetR/AcrR family transcriptional regulator;protein_id=WP_224056470.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 33882 34007 . + . ID=gene-LDO38_RS30085;Name=LDO38_RS30085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30085 NZ_CAJZAL010000133.1 GeneMarkS-2+ CDS 33882 34007 . + 0 ID=cds-WP_257785827.1;Parent=gene-LDO38_RS30085;Dbxref=GenBank:WP_257785827.1;Name=WP_257785827.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30085;product=hypothetical protein;protein_id=WP_257785827.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 34083 35294 . + . ID=gene-LDO38_RS13435;Name=LDO38_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13435;old_locus_tag=BVI2075_320031 NZ_CAJZAL010000133.1 Protein Homology CDS 34083 35294 . + 0 ID=cds-WP_011881306.1;Parent=gene-LDO38_RS13435;Dbxref=GenBank:WP_011881306.1;Name=WP_011881306.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881306.1;locus_tag=LDO38_RS13435;product=MFS transporter;protein_id=WP_011881306.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 35346 35798 . + . ID=gene-LDO38_RS13440;Name=LDO38_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13440 NZ_CAJZAL010000133.1 GeneMarkS-2+ CDS 35346 35798 . + 0 ID=cds-WP_174479781.1;Parent=gene-LDO38_RS13440;Dbxref=GenBank:WP_174479781.1;Name=WP_174479781.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS13440;product=hypothetical protein;protein_id=WP_174479781.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 35984 36271 . - . ID=gene-LDO38_RS13445;Name=LDO38_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13445;old_locus_tag=BVI2075_320033 NZ_CAJZAL010000133.1 Protein Homology CDS 35984 36271 . - 0 ID=cds-WP_014724392.1;Parent=gene-LDO38_RS13445;Dbxref=GenBank:WP_014724392.1;Name=WP_014724392.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881304.1;locus_tag=LDO38_RS13445;product=putative quinol monooxygenase;protein_id=WP_014724392.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 36447 36983 . - . ID=gene-LDO38_RS13450;Name=LDO38_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13450;old_locus_tag=BVI2075_320034 NZ_CAJZAL010000133.1 Protein Homology CDS 36447 36983 . - 0 ID=cds-WP_011881303.1;Parent=gene-LDO38_RS13450;Dbxref=GenBank:WP_011881303.1;Name=WP_011881303.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724391.1;locus_tag=LDO38_RS13450;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_011881303.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 37256 37624 . - . ID=gene-LDO38_RS13455;Name=LDO38_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13455;old_locus_tag=BVI2075_320035 NZ_CAJZAL010000133.1 Protein Homology CDS 37256 37624 . - 0 ID=cds-WP_014724390.1;Parent=gene-LDO38_RS13455;Dbxref=GenBank:WP_014724390.1;Name=WP_014724390.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881301.1;locus_tag=LDO38_RS13455;product=BON domain-containing protein;protein_id=WP_014724390.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 38108 38908 . + . ID=gene-LDO38_RS13460;Name=LDO38_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13460;old_locus_tag=BVI2075_320037 NZ_CAJZAL010000133.1 Protein Homology CDS 38108 38908 . + 0 ID=cds-WP_124260259.1;Parent=gene-LDO38_RS13460;Dbxref=GenBank:WP_124260259.1;Name=WP_124260259.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482433.1;locus_tag=LDO38_RS13460;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_124260259.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 38965 39726 . + . ID=gene-LDO38_RS13465;Name=LDO38_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13465;old_locus_tag=BVI2075_320038 NZ_CAJZAL010000133.1 Protein Homology CDS 38965 39726 . + 0 ID=cds-WP_011881299.1;Parent=gene-LDO38_RS13465;Dbxref=GenBank:WP_011881299.1;Name=WP_011881299.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881299.1;locus_tag=LDO38_RS13465;product=SDR family oxidoreductase;protein_id=WP_011881299.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 39771 41135 . + . ID=gene-LDO38_RS13470;Name=LDO38_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13470;old_locus_tag=BVI2075_320039 NZ_CAJZAL010000133.1 Protein Homology CDS 39771 41135 . + 0 ID=cds-WP_060090746.1;Parent=gene-LDO38_RS13470;Dbxref=GenBank:WP_060090746.1;Name=WP_060090746.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482403.1;locus_tag=LDO38_RS13470;product=FAD-dependent oxidoreductase;protein_id=WP_060090746.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 41128 41613 . - . ID=gene-LDO38_RS13475;Name=LDO38_RS13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13475 NZ_CAJZAL010000133.1 GeneMarkS-2+ CDS 41128 41613 . - 0 ID=cds-WP_124260260.1;Parent=gene-LDO38_RS13475;Dbxref=GenBank:WP_124260260.1;Name=WP_124260260.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS13475;product=hypothetical protein;protein_id=WP_124260260.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 41626 42954 . + . ID=gene-LDO38_RS13480;Name=LDO38_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13480;old_locus_tag=BVI2075_320040 NZ_CAJZAL010000133.1 Protein Homology CDS 41626 42954 . + 0 ID=cds-WP_034194849.1;Parent=gene-LDO38_RS13480;Dbxref=GenBank:WP_034194849.1;Name=WP_034194849.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881297.1;locus_tag=LDO38_RS13480;product=MFS transporter;protein_id=WP_034194849.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 43009 43653 . - . ID=gene-LDO38_RS13485;Name=LDO38_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13485;old_locus_tag=BVI2075_320041 NZ_CAJZAL010000133.1 Protein Homology CDS 43009 43653 . - 0 ID=cds-WP_011881296.1;Parent=gene-LDO38_RS13485;Dbxref=GenBank:WP_011881296.1;Name=WP_011881296.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482375.1;locus_tag=LDO38_RS13485;product=response regulator transcription factor;protein_id=WP_011881296.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 43650 45548 . - . ID=gene-LDO38_RS13490;Name=LDO38_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13490;old_locus_tag=BVI2075_320042 NZ_CAJZAL010000133.1 Protein Homology CDS 43650 45548 . - 0 ID=cds-WP_069239900.1;Parent=gene-LDO38_RS13490;Dbxref=GenBank:WP_069239900.1;Name=WP_069239900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482381.1;locus_tag=LDO38_RS13490;product=ATP-binding protein;protein_id=WP_069239900.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 45580 45960 . - . ID=gene-LDO38_RS13495;Name=LDO38_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13495;old_locus_tag=BVI2075_320043 NZ_CAJZAL010000133.1 Protein Homology CDS 45580 45960 . - 0 ID=cds-WP_011881294.1;Parent=gene-LDO38_RS13495;Dbxref=GenBank:WP_011881294.1;Name=WP_011881294.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881294.1;locus_tag=LDO38_RS13495;product=response regulator transcription factor;protein_id=WP_011881294.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 46118 47149 . - . ID=gene-LDO38_RS13500;Name=LDO38_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13500;old_locus_tag=BVI2075_320044 NZ_CAJZAL010000133.1 Protein Homology CDS 46118 47149 . - 0 ID=cds-WP_124260261.1;Parent=gene-LDO38_RS13500;Dbxref=GenBank:WP_124260261.1;Name=WP_124260261.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482426.1;locus_tag=LDO38_RS13500;product=LysR family transcriptional regulator;protein_id=WP_124260261.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 47404 48231 . - . ID=gene-LDO38_RS13505;Name=LDO38_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13505;old_locus_tag=BVI2075_320045 NZ_CAJZAL010000133.1 Protein Homology CDS 47404 48231 . - 0 ID=cds-WP_224056471.1;Parent=gene-LDO38_RS13505;Dbxref=GenBank:WP_224056471.1;Name=WP_224056471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724384.1;locus_tag=LDO38_RS13505;product=hypothetical protein;protein_id=WP_224056471.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 48415 49227 . - . ID=gene-LDO38_RS13510;Name=LDO38_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13510;old_locus_tag=BVI2075_320046 NZ_CAJZAL010000133.1 Protein Homology CDS 48415 49227 . - 0 ID=cds-WP_059696499.1;Parent=gene-LDO38_RS13510;Dbxref=GenBank:WP_059696499.1;Name=WP_059696499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881291.1;locus_tag=LDO38_RS13510;product=AraC family transcriptional regulator;protein_id=WP_059696499.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 49346 50005 . + . ID=gene-LDO38_RS13515;Name=LDO38_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13515;old_locus_tag=BVI2075_320047 NZ_CAJZAL010000133.1 Protein Homology CDS 49346 50005 . + 0 ID=cds-WP_124260297.1;Parent=gene-LDO38_RS13515;Dbxref=GenBank:WP_124260297.1;Name=WP_124260297.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759993.1;locus_tag=LDO38_RS13515;product=glutathione S-transferase family protein;protein_id=WP_124260297.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 50209 51693 . + . ID=gene-LDO38_RS13520;Name=LDO38_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13520;old_locus_tag=BVI2075_320048 NZ_CAJZAL010000133.1 Protein Homology CDS 50209 51693 . + 0 ID=cds-WP_124260296.1;Parent=gene-LDO38_RS13520;Dbxref=GenBank:WP_124260296.1;Name=WP_124260296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724382.1;locus_tag=LDO38_RS13520;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_124260296.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq pseudogene 51783 52288 . - . ID=gene-LDO38_RS13525;Name=glyA;end_range=52288,.;gbkey=Gene;gene=glyA;gene_biotype=pseudogene;locus_tag=LDO38_RS13525;old_locus_tag=BVI2075_320049;partial=true;pseudo=true NZ_CAJZAL010000133.1 Protein Homology CDS 51783 52288 . - 2 ID=cds-LDO38_RS13525;Parent=gene-LDO38_RS13525;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=52288,.;gbkey=CDS;gene=glyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356345.1;locus_tag=LDO38_RS13525;partial=true;product=serine hydroxymethyltransferase;pseudo=true;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 52949 53371 . - . ID=gene-LDO38_RS13535;Name=LDO38_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13535;old_locus_tag=BVI2075_320051 NZ_CAJZAL010000133.1 Protein Homology CDS 52949 53371 . - 0 ID=cds-WP_224056472.1;Parent=gene-LDO38_RS13535;Dbxref=GenBank:WP_224056472.1;Name=WP_224056472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724378.1;locus_tag=LDO38_RS13535;product=2-oxoglutarate dehydrogenase;protein_id=WP_224056472.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 53429 55279 . - . ID=gene-LDO38_RS13540;Name=LDO38_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13540;old_locus_tag=BVI2075_320052 NZ_CAJZAL010000133.1 Protein Homology CDS 53429 55279 . - 0 ID=cds-WP_041494053.1;Parent=gene-LDO38_RS13540;Dbxref=GenBank:WP_041494053.1;Name=WP_041494053.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760114.1;locus_tag=LDO38_RS13540;product=S10 family serine carboxypeptidase-like protein;protein_id=WP_041494053.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 55528 55767 . + . ID=gene-LDO38_RS13545;Name=LDO38_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13545;old_locus_tag=BVI2075_320053 NZ_CAJZAL010000133.1 GeneMarkS-2+ CDS 55528 55767 . + 0 ID=cds-WP_124260295.1;Parent=gene-LDO38_RS13545;Dbxref=GenBank:WP_124260295.1;Name=WP_124260295.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS13545;product=hypothetical protein;protein_id=WP_124260295.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 56028 57839 . - . ID=gene-LDO38_RS13550;Name=LDO38_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13550;old_locus_tag=BVI2075_320054 NZ_CAJZAL010000133.1 Protein Homology CDS 56028 57839 . - 0 ID=cds-WP_034193684.1;Parent=gene-LDO38_RS13550;Dbxref=GenBank:WP_034193684.1;Name=WP_034193684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409681.1;locus_tag=LDO38_RS13550;product=ExeM/NucH family extracellular endonuclease;protein_id=WP_034193684.1;transl_table=11 NZ_CAJZAL010000133.1 cmsearch riboswitch 58068 58203 . + . ID=id-NZ_CAJZAL010000133.1:58068..58203;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAL010000133.1 RefSeq gene 58334 59344 . + . ID=gene-LDO38_RS13555;Name=LDO38_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13555;old_locus_tag=BVI2075_320056 NZ_CAJZAL010000133.1 Protein Homology CDS 58334 59344 . + 0 ID=cds-WP_124260294.1;Parent=gene-LDO38_RS13555;Dbxref=GenBank:WP_124260294.1;Name=WP_124260294.1;Ontology_term=GO:0006874,GO:0008273;gbkey=CDS;go_function=calcium%2C potassium:sodium antiporter activity|0008273||IEA;go_process=intracellular calcium ion homeostasis|0006874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881283.1;locus_tag=LDO38_RS13555;product=sodium:calcium antiporter;protein_id=WP_124260294.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 59388 60026 . - . ID=gene-LDO38_RS13560;Name=LDO38_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13560;old_locus_tag=BVI2075_320057 NZ_CAJZAL010000133.1 Protein Homology CDS 59388 60026 . - 0 ID=cds-WP_014724373.1;Parent=gene-LDO38_RS13560;Dbxref=GenBank:WP_014724373.1;Name=WP_014724373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724373.1;locus_tag=LDO38_RS13560;product=glutathione S-transferase C-terminal domain-containing protein;protein_id=WP_014724373.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 60168 60497 . + . ID=gene-LDO38_RS13565;Name=LDO38_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13565;old_locus_tag=BVI2075_320058 NZ_CAJZAL010000133.1 Protein Homology CDS 60168 60497 . + 0 ID=cds-WP_041494052.1;Parent=gene-LDO38_RS13565;Dbxref=GenBank:WP_041494052.1;Name=WP_041494052.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881281.1;locus_tag=LDO38_RS13565;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_041494052.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 60544 60912 . + . ID=gene-LDO38_RS13570;Name=LDO38_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13570;old_locus_tag=BVI2075_320059 NZ_CAJZAL010000133.1 Protein Homology CDS 60544 60912 . + 0 ID=cds-WP_011881280.1;Parent=gene-LDO38_RS13570;Dbxref=GenBank:WP_011881280.1;Name=WP_011881280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881280.1;locus_tag=LDO38_RS13570;product=hypothetical protein;protein_id=WP_011881280.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 61135 62535 . + . ID=gene-LDO38_RS13575;Name=LDO38_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13575;old_locus_tag=BVI2075_320060 NZ_CAJZAL010000133.1 Protein Homology CDS 61135 62535 . + 0 ID=cds-WP_124260293.1;Parent=gene-LDO38_RS13575;Dbxref=GenBank:WP_124260293.1;Name=WP_124260293.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404460.1;locus_tag=LDO38_RS13575;product=MFS transporter;protein_id=WP_124260293.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 63113 63997 . + . ID=gene-LDO38_RS13580;Name=LDO38_RS13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13580;old_locus_tag=BVI2075_320062 NZ_CAJZAL010000133.1 Protein Homology CDS 63113 63997 . + 0 ID=cds-WP_124260292.1;Parent=gene-LDO38_RS13580;Dbxref=GenBank:WP_124260292.1;Name=WP_124260292.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724368.1;locus_tag=LDO38_RS13580;product=helix-turn-helix transcriptional regulator;protein_id=WP_124260292.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 64038 64238 . - . ID=gene-LDO38_RS13585;Name=LDO38_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13585;old_locus_tag=BVI2075_320063 NZ_CAJZAL010000133.1 Protein Homology CDS 64038 64238 . - 0 ID=cds-WP_034193691.1;Parent=gene-LDO38_RS13585;Dbxref=GenBank:WP_034193691.1;Name=WP_034193691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749416.1;locus_tag=LDO38_RS13585;product=hypothetical protein;protein_id=WP_034193691.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 64269 65570 . - . ID=gene-LDO38_RS13590;Name=LDO38_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13590;old_locus_tag=BVI2075_320064 NZ_CAJZAL010000133.1 Protein Homology CDS 64269 65570 . - 0 ID=cds-WP_059462839.1;Parent=gene-LDO38_RS13590;Dbxref=GenBank:WP_059462839.1;Name=WP_059462839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479881.1;locus_tag=LDO38_RS13590;product=DUF3422 family protein;protein_id=WP_059462839.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 65729 66604 . + . ID=gene-LDO38_RS13595;Name=LDO38_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13595;old_locus_tag=BVI2075_320065 NZ_CAJZAL010000133.1 Protein Homology CDS 65729 66604 . + 0 ID=cds-WP_011881275.1;Parent=gene-LDO38_RS13595;Dbxref=GenBank:WP_011881275.1;Name=WP_011881275.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397730.1;locus_tag=LDO38_RS13595;product=LysR family transcriptional regulator;protein_id=WP_011881275.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 66635 67201 . - . ID=gene-LDO38_RS13600;Name=LDO38_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13600 NZ_CAJZAL010000133.1 Protein Homology CDS 66635 67201 . - 0 ID=cds-WP_011881274.1;Parent=gene-LDO38_RS13600;Dbxref=GenBank:WP_011881274.1;Name=WP_011881274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660091.1;locus_tag=LDO38_RS13600;product=hypothetical protein;protein_id=WP_011881274.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 68381 70102 . - . ID=gene-LDO38_RS13610;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=LDO38_RS13610;old_locus_tag=BVI2075_320067 NZ_CAJZAL010000133.1 Protein Homology CDS 68381 70102 . - 0 ID=cds-WP_069239889.1;Parent=gene-LDO38_RS13610;Dbxref=GenBank:WP_069239889.1;Name=WP_069239889.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762136.1;locus_tag=LDO38_RS13610;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_069239889.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 70469 70969 . - . ID=gene-LDO38_RS13615;Name=LDO38_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13615;old_locus_tag=BVI2075_320068 NZ_CAJZAL010000133.1 Protein Homology CDS 70469 70969 . - 0 ID=cds-WP_011881271.1;Parent=gene-LDO38_RS13615;Dbxref=GenBank:WP_011881271.1;Name=WP_011881271.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749403.1;locus_tag=LDO38_RS13615;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011881271.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 71158 72174 . + . ID=gene-LDO38_RS13620;Name=LDO38_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13620;old_locus_tag=BVI2075_320069 NZ_CAJZAL010000133.1 Protein Homology CDS 71158 72174 . + 0 ID=cds-WP_011881270.1;Parent=gene-LDO38_RS13620;Dbxref=GenBank:WP_011881270.1;Name=WP_011881270.1;Ontology_term=GO:0009310,GO:0008660,GO:0030170;gbkey=CDS;go_function=1-aminocyclopropane-1-carboxylate deaminase activity|0008660||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=amine catabolic process|0009310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099870.1;locus_tag=LDO38_RS13620;product=1-aminocyclopropane-1-carboxylate deaminase;protein_id=WP_011881270.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 72229 75609 . - . ID=gene-LDO38_RS13625;Name=LDO38_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13625;old_locus_tag=BVI2075_320070 NZ_CAJZAL010000133.1 Protein Homology CDS 72229 75609 . - 0 ID=cds-WP_059462837.1;Parent=gene-LDO38_RS13625;Dbxref=GenBank:WP_059462837.1;Name=WP_059462837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881269.1;locus_tag=LDO38_RS13625;product=ATP-binding protein;protein_id=WP_059462837.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 75703 76377 . - . ID=gene-LDO38_RS13630;Name=LDO38_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13630;old_locus_tag=BVI2075_320071 NZ_CAJZAL010000133.1 Protein Homology CDS 75703 76377 . - 0 ID=cds-WP_011881268.1;Parent=gene-LDO38_RS13630;Dbxref=GenBank:WP_011881268.1;Name=WP_011881268.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881268.1;locus_tag=LDO38_RS13630;product=response regulator;protein_id=WP_011881268.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 76712 76900 . - . ID=gene-LDO38_RS13635;Name=LDO38_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13635;old_locus_tag=BVI2075_320073 NZ_CAJZAL010000133.1 Protein Homology CDS 76712 76900 . - 0 ID=cds-WP_085954502.1;Parent=gene-LDO38_RS13635;Dbxref=GenBank:WP_085954502.1;Name=WP_085954502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724358.1;locus_tag=LDO38_RS13635;product=hypothetical protein;protein_id=WP_085954502.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 77017 80082 . - . ID=gene-LDO38_RS13640;Name=LDO38_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13640;old_locus_tag=BVI2075_320074 NZ_CAJZAL010000133.1 Protein Homology CDS 77017 80082 . - 0 ID=cds-WP_069246569.1;Parent=gene-LDO38_RS13640;Dbxref=GenBank:WP_069246569.1;Name=WP_069246569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881267.1;locus_tag=LDO38_RS13640;product=ATP-binding protein;protein_id=WP_069246569.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 80721 81596 . + . ID=gene-LDO38_RS13645;Name=LDO38_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13645;old_locus_tag=BVI2075_320076 NZ_CAJZAL010000133.1 Protein Homology CDS 80721 81596 . + 0 ID=cds-WP_014724356.1;Parent=gene-LDO38_RS13645;Dbxref=GenBank:WP_014724356.1;Name=WP_014724356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365211.1;locus_tag=LDO38_RS13645;product=response regulator;protein_id=WP_014724356.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 81645 82145 . + . ID=gene-LDO38_RS13650;Name=LDO38_RS13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13650;old_locus_tag=BVI2075_320077 NZ_CAJZAL010000133.1 Protein Homology CDS 81645 82145 . + 0 ID=cds-WP_045578308.1;Parent=gene-LDO38_RS13650;Dbxref=GenBank:WP_045578308.1;Name=WP_045578308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749397.1;locus_tag=LDO38_RS13650;product=molybdopterin-dependent oxidoreductase;protein_id=WP_045578308.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 82155 83969 . + . ID=gene-LDO38_RS13655;Name=atsR;gbkey=Gene;gene=atsR;gene_biotype=protein_coding;locus_tag=LDO38_RS13655;old_locus_tag=BVI2075_320078 NZ_CAJZAL010000133.1 Protein Homology CDS 82155 83969 . + 0 ID=cds-WP_011881264.1;Parent=gene-LDO38_RS13655;Dbxref=GenBank:WP_011881264.1;Name=WP_011881264.1;Note=AtsR signifies Adherence and T6SS Regulator.;gbkey=CDS;gene=atsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397681.1;locus_tag=LDO38_RS13655;product=hybrid sensor histidine kinase/response regulator AtsR;protein_id=WP_011881264.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 83987 84406 . - . ID=gene-LDO38_RS13660;Name=LDO38_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13660;old_locus_tag=BVI2075_320079 NZ_CAJZAL010000133.1 Protein Homology CDS 83987 84406 . - 0 ID=cds-WP_014724354.1;Parent=gene-LDO38_RS13660;Dbxref=GenBank:WP_014724354.1;Name=WP_014724354.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255409.1;locus_tag=LDO38_RS13660;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_014724354.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 84417 84743 . - . ID=gene-LDO38_RS13665;Name=LDO38_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13665;old_locus_tag=BVI2075_320080 NZ_CAJZAL010000133.1 Protein Homology CDS 84417 84743 . - 0 ID=cds-WP_011881262.1;Parent=gene-LDO38_RS13665;Dbxref=GenBank:WP_011881262.1;Name=WP_011881262.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485487.1;locus_tag=LDO38_RS13665;product=thioredoxin family protein;protein_id=WP_011881262.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 84997 85329 . + . ID=gene-LDO38_RS13670;Name=LDO38_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13670;old_locus_tag=BVI2075_320081 NZ_CAJZAL010000133.1 Protein Homology CDS 84997 85329 . + 0 ID=cds-WP_011881261.1;Parent=gene-LDO38_RS13670;Dbxref=GenBank:WP_011881261.1;Name=WP_011881261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881261.1;locus_tag=LDO38_RS13670;product=DUF2322 family protein;protein_id=WP_011881261.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 85445 86014 . - . ID=gene-LDO38_RS13675;Name=LDO38_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13675;old_locus_tag=BVI2075_320082 NZ_CAJZAL010000133.1 Protein Homology CDS 85445 86014 . - 0 ID=cds-WP_224056473.1;Parent=gene-LDO38_RS13675;Dbxref=GenBank:WP_224056473.1;Name=WP_224056473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188099.1;locus_tag=LDO38_RS13675;product=hypothetical protein;protein_id=WP_224056473.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 86197 86655 . - . ID=gene-LDO38_RS13680;Name=LDO38_RS13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13680;old_locus_tag=BVI2075_320084 NZ_CAJZAL010000133.1 Protein Homology CDS 86197 86655 . - 0 ID=cds-WP_009691375.1;Parent=gene-LDO38_RS13680;Dbxref=GenBank:WP_009691375.1;Name=WP_009691375.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330690.1;locus_tag=LDO38_RS13680;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_009691375.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 86782 87519 . + . ID=gene-LDO38_RS13685;Name=LDO38_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13685;old_locus_tag=BVI2075_320085 NZ_CAJZAL010000133.1 Protein Homology CDS 86782 87519 . + 0 ID=cds-WP_011881258.1;Parent=gene-LDO38_RS13685;Dbxref=GenBank:WP_011881258.1;Name=WP_011881258.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660066.1;locus_tag=LDO38_RS13685;product=AzlC family ABC transporter permease;protein_id=WP_011881258.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 87509 87811 . + . ID=gene-LDO38_RS13690;Name=LDO38_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13690;old_locus_tag=BVI2075_320086 NZ_CAJZAL010000133.1 Protein Homology CDS 87509 87811 . + 0 ID=cds-WP_034193698.1;Parent=gene-LDO38_RS13690;Dbxref=GenBank:WP_034193698.1;Name=WP_034193698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900507.1;locus_tag=LDO38_RS13690;product=AzlD family protein;protein_id=WP_034193698.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 87971 88798 . - . ID=gene-LDO38_RS13695;Name=LDO38_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13695;old_locus_tag=BVI2075_320087 NZ_CAJZAL010000133.1 Protein Homology CDS 87971 88798 . - 0 ID=cds-WP_046426026.1;Parent=gene-LDO38_RS13695;Dbxref=GenBank:WP_046426026.1;Name=WP_046426026.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749366.1;locus_tag=LDO38_RS13695;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_046426026.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 88868 89335 . - . ID=gene-LDO38_RS13700;Name=LDO38_RS13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13700;old_locus_tag=BVI2075_320088 NZ_CAJZAL010000133.1 Protein Homology CDS 88868 89335 . - 0 ID=cds-WP_011881255.1;Parent=gene-LDO38_RS13700;Dbxref=GenBank:WP_011881255.1;Name=WP_011881255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749365.1;locus_tag=LDO38_RS13700;product=cupin domain-containing protein;protein_id=WP_011881255.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 89467 90819 . - . ID=gene-LDO38_RS13705;Name=LDO38_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13705;old_locus_tag=BVI2075_320089 NZ_CAJZAL010000133.1 Protein Homology CDS 89467 90819 . - 0 ID=cds-WP_011881254.1;Parent=gene-LDO38_RS13705;Dbxref=GenBank:WP_011881254.1;Name=WP_011881254.1;Ontology_term=GO:0019752,GO:0016830,GO:0030170;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749363.1;locus_tag=LDO38_RS13705;product=pyridoxal phosphate-dependent decarboxylase family protein;protein_id=WP_011881254.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 90839 91138 . - . ID=gene-LDO38_RS13710;Name=LDO38_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13710;old_locus_tag=BVI2075_320090 NZ_CAJZAL010000133.1 Protein Homology CDS 90839 91138 . - 0 ID=cds-WP_011881253.1;Parent=gene-LDO38_RS13710;Dbxref=GenBank:WP_011881253.1;Name=WP_011881253.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749362.1;locus_tag=LDO38_RS13710;product=ArsR/SmtB family transcription factor;protein_id=WP_011881253.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 91394 92407 . + . ID=gene-LDO38_RS13715;Name=LDO38_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13715;old_locus_tag=BVI2075_320091 NZ_CAJZAL010000133.1 Protein Homology CDS 91394 92407 . + 0 ID=cds-WP_011881252.1;Parent=gene-LDO38_RS13715;Dbxref=GenBank:WP_011881252.1;Name=WP_011881252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881252.1;locus_tag=LDO38_RS13715;product=hypothetical protein;protein_id=WP_011881252.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 92640 93449 . + . ID=gene-LDO38_RS13720;Name=LDO38_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13720;old_locus_tag=BVI2075_320092 NZ_CAJZAL010000133.1 Protein Homology CDS 92640 93449 . + 0 ID=cds-WP_059561764.1;Parent=gene-LDO38_RS13720;Dbxref=GenBank:WP_059561764.1;Name=WP_059561764.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548463.1;locus_tag=LDO38_RS13720;product=TlpA family protein disulfide reductase;protein_id=WP_059561764.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 93475 93879 . - . ID=gene-LDO38_RS13725;Name=LDO38_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13725;old_locus_tag=BVI2075_320093 NZ_CAJZAL010000133.1 Protein Homology CDS 93475 93879 . - 0 ID=cds-WP_011881250.1;Parent=gene-LDO38_RS13725;Dbxref=GenBank:WP_011881250.1;Name=WP_011881250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756235.1;locus_tag=LDO38_RS13725;product=hypothetical protein;protein_id=WP_011881250.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 94174 95049 . + . ID=gene-LDO38_RS13730;Name=LDO38_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13730;old_locus_tag=BVI2075_320094 NZ_CAJZAL010000133.1 Protein Homology CDS 94174 95049 . + 0 ID=cds-WP_011881249.1;Parent=gene-LDO38_RS13730;Dbxref=GenBank:WP_011881249.1;Name=WP_011881249.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756238.1;locus_tag=LDO38_RS13730;product=mechanosensitive ion channel family protein;protein_id=WP_011881249.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 95229 96266 . - . ID=gene-LDO38_RS13735;Name=LDO38_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13735;old_locus_tag=BVI2075_320095 NZ_CAJZAL010000133.1 Protein Homology CDS 95229 96266 . - 0 ID=cds-WP_011881248.1;Parent=gene-LDO38_RS13735;Dbxref=GenBank:WP_011881248.1;Name=WP_011881248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881248.1;locus_tag=LDO38_RS13735;product=histone deacetylase family protein;protein_id=WP_011881248.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 96391 96879 . + . ID=gene-LDO38_RS13740;Name=LDO38_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13740;old_locus_tag=BVI2075_320096 NZ_CAJZAL010000133.1 Protein Homology CDS 96391 96879 . + 0 ID=cds-WP_011881247.1;Parent=gene-LDO38_RS13740;Dbxref=GenBank:WP_011881247.1;Name=WP_011881247.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365166.1;locus_tag=LDO38_RS13740;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011881247.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 96940 97260 . + . ID=gene-LDO38_RS13745;Name=LDO38_RS13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13745;old_locus_tag=BVI2075_320097 NZ_CAJZAL010000133.1 Protein Homology CDS 96940 97260 . + 0 ID=cds-WP_059460416.1;Parent=gene-LDO38_RS13745;Dbxref=GenBank:WP_059460416.1;Name=WP_059460416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724346.1;locus_tag=LDO38_RS13745;product=hypothetical protein;protein_id=WP_059460416.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 97670 97867 . + . ID=gene-LDO38_RS13750;Name=LDO38_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13750;old_locus_tag=BVI2075_320100 NZ_CAJZAL010000133.1 Protein Homology CDS 97670 97867 . + 0 ID=cds-WP_011881245.1;Parent=gene-LDO38_RS13750;Dbxref=GenBank:WP_011881245.1;Name=WP_011881245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756243.1;locus_tag=LDO38_RS13750;product=hypothetical protein;protein_id=WP_011881245.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 97864 99261 . + . ID=gene-LDO38_RS13755;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=LDO38_RS13755;old_locus_tag=BVI2075_320099 NZ_CAJZAL010000133.1 Protein Homology CDS 97864 99261 . + 0 ID=cds-WP_014724345.1;Parent=gene-LDO38_RS13755;Dbxref=GenBank:WP_014724345.1;Name=WP_014724345.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548605.1;locus_tag=LDO38_RS13755;product=ATP-dependent RNA helicase DbpA;protein_id=WP_014724345.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 99301 100125 . - . ID=gene-LDO38_RS13760;Name=LDO38_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13760;old_locus_tag=BVI2075_320101 NZ_CAJZAL010000133.1 Protein Homology CDS 99301 100125 . - 0 ID=cds-WP_059474422.1;Parent=gene-LDO38_RS13760;Dbxref=GenBank:WP_059474422.1;Name=WP_059474422.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660029.1;locus_tag=LDO38_RS13760;product=phosphate/phosphite/phosphonate ABC transporter substrate-binding protein;protein_id=WP_059474422.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 100431 101456 . + . ID=gene-LDO38_RS13765;Name=LDO38_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13765;old_locus_tag=BVI2075_320102 NZ_CAJZAL010000133.1 Protein Homology CDS 100431 101456 . + 0 ID=cds-WP_059474423.1;Parent=gene-LDO38_RS13765;Dbxref=GenBank:WP_059474423.1;Name=WP_059474423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356565.1;locus_tag=LDO38_RS13765;product=fatty acid desaturase;protein_id=WP_059474423.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 101446 101667 . - . ID=gene-LDO38_RS13770;Name=LDO38_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13770;old_locus_tag=BVI2075_320103 NZ_CAJZAL010000133.1 GeneMarkS-2+ CDS 101446 101667 . - 0 ID=cds-WP_155627812.1;Parent=gene-LDO38_RS13770;Dbxref=GenBank:WP_155627812.1;Name=WP_155627812.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS13770;product=hypothetical protein;protein_id=WP_155627812.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 101715 102917 . + . ID=gene-LDO38_RS13775;Name=LDO38_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13775;old_locus_tag=BVI2075_320104 NZ_CAJZAL010000133.1 Protein Homology CDS 101715 102917 . + 0 ID=cds-WP_034193707.1;Parent=gene-LDO38_RS13775;Dbxref=GenBank:WP_034193707.1;Name=WP_034193707.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338936.1;locus_tag=LDO38_RS13775;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_034193707.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 102950 103837 . - . ID=gene-LDO38_RS13780;Name=LDO38_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13780;old_locus_tag=BVI2075_320106 NZ_CAJZAL010000133.1 Protein Homology CDS 102950 103837 . - 0 ID=cds-WP_059568003.1;Parent=gene-LDO38_RS13780;Dbxref=GenBank:WP_059568003.1;Name=WP_059568003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881240.1;locus_tag=LDO38_RS13780;product=NmrA family NAD(P)-binding protein;protein_id=WP_059568003.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 104059 104934 . - . ID=gene-LDO38_RS13785;Name=LDO38_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13785;old_locus_tag=BVI2075_320107 NZ_CAJZAL010000133.1 Protein Homology CDS 104059 104934 . - 0 ID=cds-WP_045578317.1;Parent=gene-LDO38_RS13785;Dbxref=GenBank:WP_045578317.1;Name=WP_045578317.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881239.1;locus_tag=LDO38_RS13785;product=AraC family transcriptional regulator;protein_id=WP_045578317.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 105127 105324 . + . ID=gene-LDO38_RS13790;Name=LDO38_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13790;old_locus_tag=BVI2075_320108 NZ_CAJZAL010000133.1 Protein Homology CDS 105127 105324 . + 0 ID=cds-WP_059622495.1;Parent=gene-LDO38_RS13790;Dbxref=GenBank:WP_059622495.1;Name=WP_059622495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756250.1;locus_tag=LDO38_RS13790;product=hypothetical protein;protein_id=WP_059622495.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 105374 106336 . - . ID=gene-LDO38_RS13795;Name=LDO38_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13795;old_locus_tag=BVI2075_320109 NZ_CAJZAL010000133.1 Protein Homology CDS 105374 106336 . - 0 ID=cds-WP_011881237.1;Parent=gene-LDO38_RS13795;Dbxref=GenBank:WP_011881237.1;Name=WP_011881237.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881237.1;locus_tag=LDO38_RS13795;product=LysR family transcriptional regulator;protein_id=WP_011881237.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 106437 107795 . + . ID=gene-LDO38_RS13800;Name=LDO38_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13800;old_locus_tag=BVI2075_320111 NZ_CAJZAL010000133.1 Protein Homology CDS 106437 107795 . + 0 ID=cds-WP_034193711.1;Parent=gene-LDO38_RS13800;Dbxref=GenBank:WP_034193711.1;Name=WP_034193711.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881236.1;locus_tag=LDO38_RS13800;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_034193711.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 108113 108547 . + . ID=gene-LDO38_RS13805;Name=LDO38_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13805;old_locus_tag=BVI2075_320113 NZ_CAJZAL010000133.1 Protein Homology CDS 108113 108547 . + 0 ID=cds-WP_011881235.1;Parent=gene-LDO38_RS13805;Dbxref=GenBank:WP_011881235.1;Name=WP_011881235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756252.1;locus_tag=LDO38_RS13805;product=hypothetical protein;protein_id=WP_011881235.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq pseudogene 108824 108996 . + . ID=gene-LDO38_RS13810;Name=LDO38_RS13810;end_range=108996,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS13810;partial=true;pseudo=true;start_range=.,108824 NZ_CAJZAL010000133.1 Protein Homology CDS 108824 108996 . + 0 ID=cds-LDO38_RS13810;Parent=gene-LDO38_RS13810;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=108996,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365152.1;locus_tag=LDO38_RS13810;partial=true;product=histidine-type phosphatase;pseudo=true;start_range=.,108824;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 109094 109384 . + . ID=gene-LDO38_RS13815;Name=LDO38_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13815;old_locus_tag=BVI2075_320114 NZ_CAJZAL010000133.1 Protein Homology CDS 109094 109384 . + 0 ID=cds-WP_011881233.1;Parent=gene-LDO38_RS13815;Dbxref=GenBank:WP_011881233.1;Name=WP_011881233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881233.1;locus_tag=LDO38_RS13815;product=hypothetical protein;protein_id=WP_011881233.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 109830 111476 . + . ID=gene-LDO38_RS13820;Name=LDO38_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13820;old_locus_tag=BVI2075_320116 NZ_CAJZAL010000133.1 Protein Homology CDS 109830 111476 . + 0 ID=cds-WP_080484399.1;Parent=gene-LDO38_RS13820;Dbxref=GenBank:WP_080484399.1;Name=WP_080484399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660019.1;locus_tag=LDO38_RS13820;product=EAL domain-containing protein;protein_id=WP_080484399.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 111730 113322 . + . ID=gene-LDO38_RS13825;Name=LDO38_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13825;old_locus_tag=BVI2075_320117 NZ_CAJZAL010000133.1 Protein Homology CDS 111730 113322 . + 0 ID=cds-WP_069239869.1;Parent=gene-LDO38_RS13825;Dbxref=GenBank:WP_069239869.1;Name=WP_069239869.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881231.1;locus_tag=LDO38_RS13825;product=PAS domain-containing hybrid sensor histidine kinase/response regulator;protein_id=WP_069239869.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 113454 115820 . + . ID=gene-LDO38_RS13830;Name=LDO38_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13830;old_locus_tag=BVI2075_320118 NZ_CAJZAL010000133.1 Protein Homology CDS 113454 115820 . + 0 ID=cds-WP_069246573.1;Parent=gene-LDO38_RS13830;Dbxref=GenBank:WP_069246573.1;Name=WP_069246573.1;Ontology_term=GO:0000166,GO:0003676,GO:0003887;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleic acid binding|0003676||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365147.1;locus_tag=LDO38_RS13830;product=DNA polymerase II;protein_id=WP_069246573.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 116298 118364 . + . ID=gene-LDO38_RS13835;Name=LDO38_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13835;old_locus_tag=BVI2075_320120 NZ_CAJZAL010000133.1 Protein Homology CDS 116298 118364 . + 0 ID=cds-WP_069239867.1;Parent=gene-LDO38_RS13835;Dbxref=GenBank:WP_069239867.1;Name=WP_069239867.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881229.1;locus_tag=LDO38_RS13835;product=FUSC family protein;protein_id=WP_069239867.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 118361 118585 . + . ID=gene-LDO38_RS13840;Name=LDO38_RS13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13840;old_locus_tag=BVI2075_320119 NZ_CAJZAL010000133.1 Protein Homology CDS 118361 118585 . + 0 ID=cds-WP_011881228.1;Parent=gene-LDO38_RS13840;Dbxref=GenBank:WP_011881228.1;Name=WP_011881228.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894707.1;locus_tag=LDO38_RS13840;product=DUF1656 domain-containing protein;protein_id=WP_011881228.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 118588 119487 . + . ID=gene-LDO38_RS13845;Name=LDO38_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13845;old_locus_tag=BVI2075_320121 NZ_CAJZAL010000133.1 Protein Homology CDS 118588 119487 . + 0 ID=cds-WP_014724331.1;Parent=gene-LDO38_RS13845;Dbxref=GenBank:WP_014724331.1;Name=WP_014724331.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009898285.1;locus_tag=LDO38_RS13845;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_014724331.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 119481 120893 . + . ID=gene-LDO38_RS13850;Name=LDO38_RS13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13850;old_locus_tag=BVI2075_320122 NZ_CAJZAL010000133.1 Protein Homology CDS 119481 120893 . + 0 ID=cds-WP_034193716.1;Parent=gene-LDO38_RS13850;Dbxref=GenBank:WP_034193716.1;Name=WP_034193716.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881226.1;locus_tag=LDO38_RS13850;product=efflux transporter outer membrane subunit;protein_id=WP_034193716.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 120890 121927 . + . ID=gene-LDO38_RS13855;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=LDO38_RS13855;old_locus_tag=BVI2075_320123 NZ_CAJZAL010000133.1 Protein Homology CDS 120890 121927 . + 0 ID=cds-WP_045578322.1;Parent=gene-LDO38_RS13855;Dbxref=GenBank:WP_045578322.1;Name=WP_045578322.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cynR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724329.1;locus_tag=LDO38_RS13855;product=transcriptional regulator CynR;protein_id=WP_045578322.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 122315 122629 . + . ID=gene-LDO38_RS13860;Name=LDO38_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13860;old_locus_tag=BVI2075_320124 NZ_CAJZAL010000133.1 Protein Homology CDS 122315 122629 . + 0 ID=cds-WP_034193718.1;Parent=gene-LDO38_RS13860;Dbxref=GenBank:WP_034193718.1;Name=WP_034193718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010095510.1;locus_tag=LDO38_RS13860;product=hypothetical protein;protein_id=WP_034193718.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 122667 123629 . + . ID=gene-LDO38_RS13865;Name=LDO38_RS13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13865;old_locus_tag=BVI2075_320125 NZ_CAJZAL010000133.1 Protein Homology CDS 122667 123629 . + 0 ID=cds-WP_014724326.1;Parent=gene-LDO38_RS13865;Dbxref=GenBank:WP_014724326.1;Name=WP_014724326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724326.1;locus_tag=LDO38_RS13865;product=LysR family transcriptional regulator;protein_id=WP_014724326.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 123720 124034 . + . ID=gene-LDO38_RS13870;Name=LDO38_RS13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13870;old_locus_tag=BVI2075_320126 NZ_CAJZAL010000133.1 Protein Homology CDS 123720 124034 . + 0 ID=cds-WP_069239866.1;Parent=gene-LDO38_RS13870;Dbxref=GenBank:WP_069239866.1;Name=WP_069239866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881223.1;locus_tag=LDO38_RS13870;product=DUF4148 domain-containing protein;protein_id=WP_069239866.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 124170 125273 . + . ID=gene-LDO38_RS13875;Name=LDO38_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13875;old_locus_tag=BVI2075_320127 NZ_CAJZAL010000133.1 Protein Homology CDS 124170 125273 . + 0 ID=cds-WP_069239865.1;Parent=gene-LDO38_RS13875;Dbxref=GenBank:WP_069239865.1;Name=WP_069239865.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881222.1;locus_tag=LDO38_RS13875;product=J domain-containing protein;protein_id=WP_069239865.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 125315 126220 . - . ID=gene-LDO38_RS13880;Name=LDO38_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13880;old_locus_tag=BVI2075_320128 NZ_CAJZAL010000133.1 Protein Homology CDS 125315 126220 . - 0 ID=cds-WP_059462821.1;Parent=gene-LDO38_RS13880;Dbxref=GenBank:WP_059462821.1;Name=WP_059462821.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881221.1;locus_tag=LDO38_RS13880;product=LysR family transcriptional regulator;protein_id=WP_059462821.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 126332 127576 . - . ID=gene-LDO38_RS13885;Name=LDO38_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13885;old_locus_tag=BVI2075_320129 NZ_CAJZAL010000133.1 Protein Homology CDS 126332 127576 . - 0 ID=cds-WP_011881220.1;Parent=gene-LDO38_RS13885;Dbxref=GenBank:WP_011881220.1;Name=WP_011881220.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483083.1;locus_tag=LDO38_RS13885;product=acyl-CoA dehydrogenase family protein;protein_id=WP_011881220.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 127649 128413 . - . ID=gene-LDO38_RS13890;Name=LDO38_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13890;old_locus_tag=BVI2075_320130 NZ_CAJZAL010000133.1 Protein Homology CDS 127649 128413 . - 0 ID=cds-WP_011881219.1;Parent=gene-LDO38_RS13890;Dbxref=GenBank:WP_011881219.1;Name=WP_011881219.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014206877.1;locus_tag=LDO38_RS13890;product=SDR family oxidoreductase;protein_id=WP_011881219.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 128472 129503 . - . ID=gene-LDO38_RS13895;Name=LDO38_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13895;old_locus_tag=BVI2075_320131 NZ_CAJZAL010000133.1 Protein Homology CDS 128472 129503 . - 0 ID=cds-WP_034193721.1;Parent=gene-LDO38_RS13895;Dbxref=GenBank:WP_034193721.1;Name=WP_034193721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365131.1;locus_tag=LDO38_RS13895;product=phosphotransferase;protein_id=WP_034193721.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 129524 130198 . - . ID=gene-LDO38_RS13900;Name=LDO38_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13900;old_locus_tag=BVI2075_320132 NZ_CAJZAL010000133.1 Protein Homology CDS 129524 130198 . - 0 ID=cds-WP_011881217.1;Parent=gene-LDO38_RS13900;Dbxref=GenBank:WP_011881217.1;Name=WP_011881217.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881217.1;locus_tag=LDO38_RS13900;product=histidine phosphatase family protein;protein_id=WP_011881217.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 130399 130554 . + . ID=gene-LDO38_RS13905;Name=LDO38_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13905;old_locus_tag=BVI2075_320133 NZ_CAJZAL010000133.1 Protein Homology CDS 130399 130554 . + 0 ID=cds-WP_011881216.1;Parent=gene-LDO38_RS13905;Dbxref=GenBank:WP_011881216.1;Name=WP_011881216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397610.1;locus_tag=LDO38_RS13905;product=DUF3309 family protein;protein_id=WP_011881216.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 130683 132617 . - . ID=gene-LDO38_RS13910;Name=LDO38_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13910;old_locus_tag=BVI2075_320134 NZ_CAJZAL010000133.1 Protein Homology CDS 130683 132617 . - 0 ID=cds-WP_224056474.1;Parent=gene-LDO38_RS13910;Dbxref=GenBank:WP_224056474.1;Name=WP_224056474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480078.1;locus_tag=LDO38_RS13910;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_224056474.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 132959 134164 . - . ID=gene-LDO38_RS13915;Name=LDO38_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13915;old_locus_tag=BVI2075_320135 NZ_CAJZAL010000133.1 Protein Homology CDS 132959 134164 . - 0 ID=cds-WP_011881214.1;Parent=gene-LDO38_RS13915;Dbxref=GenBank:WP_011881214.1;Name=WP_011881214.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881214.1;locus_tag=LDO38_RS13915;product=MFS transporter;protein_id=WP_011881214.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 134172 134357 . - . ID=gene-LDO38_RS13920;Name=LDO38_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13920;old_locus_tag=BVI2075_320136 NZ_CAJZAL010000133.1 Protein Homology CDS 134172 134357 . - 0 ID=cds-WP_011881213.1;Parent=gene-LDO38_RS13920;Dbxref=GenBank:WP_011881213.1;Name=WP_011881213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338820.1;locus_tag=LDO38_RS13920;product=DUF1289 domain-containing protein;protein_id=WP_011881213.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 134360 135658 . - . ID=gene-LDO38_RS13925;Name=dmeF;gbkey=Gene;gene=dmeF;gene_biotype=protein_coding;locus_tag=LDO38_RS13925;old_locus_tag=BVI2075_320137 NZ_CAJZAL010000133.1 Protein Homology CDS 134360 135658 . - 0 ID=cds-WP_011881212.1;Parent=gene-LDO38_RS13925;Dbxref=GenBank:WP_011881212.1;Name=WP_011881212.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=dmeF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881212.1;locus_tag=LDO38_RS13925;product=CDF family Co(II)/Ni(II) efflux transporter DmeF;protein_id=WP_011881212.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 135670 135942 . - . ID=gene-LDO38_RS13930;Name=LDO38_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13930;old_locus_tag=BVI2075_320138 NZ_CAJZAL010000133.1 Protein Homology CDS 135670 135942 . - 0 ID=cds-WP_011881211.1;Parent=gene-LDO38_RS13930;Dbxref=GenBank:WP_011881211.1;Name=WP_011881211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009941095.1;locus_tag=LDO38_RS13930;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_011881211.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 136115 137092 . + . ID=gene-LDO38_RS13935;Name=LDO38_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13935;old_locus_tag=BVI2075_320139 NZ_CAJZAL010000133.1 Protein Homology CDS 136115 137092 . + 0 ID=cds-WP_034193725.1;Parent=gene-LDO38_RS13935;Dbxref=GenBank:WP_034193725.1;Name=WP_034193725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004539585.1;locus_tag=LDO38_RS13935;product=chromate resistance protein ChrB domain-containing protein;protein_id=WP_034193725.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 137089 138267 . + . ID=gene-LDO38_RS13940;Name=LDO38_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13940;old_locus_tag=BVI2075_320140 NZ_CAJZAL010000133.1 Protein Homology CDS 137089 138267 . + 0 ID=cds-WP_034193726.1;Parent=gene-LDO38_RS13940;Dbxref=GenBank:WP_034193726.1;Name=WP_034193726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009898219.1;locus_tag=LDO38_RS13940;product=chromate transporter;protein_id=WP_034193726.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 138388 138708 . - . ID=gene-LDO38_RS13945;Name=LDO38_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13945;old_locus_tag=BVI2075_320141 NZ_CAJZAL010000133.1 Protein Homology CDS 138388 138708 . - 0 ID=cds-WP_011881208.1;Parent=gene-LDO38_RS13945;Dbxref=GenBank:WP_011881208.1;Name=WP_011881208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545695.1;locus_tag=LDO38_RS13945;product=DUF4148 domain-containing protein;protein_id=WP_011881208.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 138922 139380 . - . ID=gene-LDO38_RS13950;Name=LDO38_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13950;old_locus_tag=BVI2075_320142 NZ_CAJZAL010000133.1 Protein Homology CDS 138922 139380 . - 0 ID=cds-WP_069239854.1;Parent=gene-LDO38_RS13950;Dbxref=GenBank:WP_069239854.1;Name=WP_069239854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372196.1;locus_tag=LDO38_RS13950;product=MEKHLA domain-containing protein;protein_id=WP_069239854.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 139599 140669 . - . ID=gene-LDO38_RS13955;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=LDO38_RS13955;old_locus_tag=BVI2075_320144 NZ_CAJZAL010000133.1 Protein Homology CDS 139599 140669 . - 0 ID=cds-WP_069246576.1;Parent=gene-LDO38_RS13955;Dbxref=GenBank:WP_069246576.1;Name=WP_069246576.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: protein motif:HMM:TIGR00418.1;locus_tag=LDO38_RS13955;product=threonine--tRNA ligase;protein_id=WP_069246576.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 140682 140807 . - . ID=gene-LDO38_RS30090;Name=LDO38_RS30090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30090 NZ_CAJZAL010000133.1 GeneMarkS-2+ CDS 140682 140807 . - 0 ID=cds-WP_257786157.1;Parent=gene-LDO38_RS30090;Dbxref=GenBank:WP_257786157.1;Name=WP_257786157.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30090;product=hypothetical protein;protein_id=WP_257786157.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 141913 143847 . + . ID=gene-LDO38_RS13960;Name=LDO38_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13960;old_locus_tag=BVI2075_320146 NZ_CAJZAL010000133.1 Protein Homology CDS 141913 143847 . + 0 ID=cds-WP_059567986.1;Parent=gene-LDO38_RS13960;Dbxref=GenBank:WP_059567986.1;Name=WP_059567986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724309.1;locus_tag=LDO38_RS13960;product=glycosyl transferase family protein;protein_id=WP_059567986.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 143849 145951 . + . ID=gene-LDO38_RS13965;Name=LDO38_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13965;old_locus_tag=BVI2075_320147 NZ_CAJZAL010000133.1 Protein Homology CDS 143849 145951 . + 0 ID=cds-WP_224056475.1;Parent=gene-LDO38_RS13965;Dbxref=GenBank:WP_224056475.1;Name=WP_224056475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881204.1;locus_tag=LDO38_RS13965;product=NfrA family protein;protein_id=WP_224056475.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 146002 147222 . + . ID=gene-LDO38_RS13970;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=LDO38_RS13970;old_locus_tag=BVI2075_320148 NZ_CAJZAL010000133.1 Protein Homology CDS 146002 147222 . + 0 ID=cds-WP_224056476.1;Parent=gene-LDO38_RS13970;Dbxref=GenBank:WP_224056476.1;Name=WP_224056476.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724307.1;locus_tag=LDO38_RS13970;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_224056476.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 147430 148047 . + . ID=gene-LDO38_RS13975;Name=LDO38_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13975;old_locus_tag=BVI2075_320149 NZ_CAJZAL010000133.1 Protein Homology CDS 147430 148047 . + 0 ID=cds-WP_011881202.1;Parent=gene-LDO38_RS13975;Dbxref=GenBank:WP_011881202.1;Name=WP_011881202.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339114.1;locus_tag=LDO38_RS13975;product=glycine zipper 2TM domain-containing protein;protein_id=WP_011881202.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 148199 149113 . - . ID=gene-LDO38_RS13980;Name=LDO38_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13980;old_locus_tag=BVI2075_320150 NZ_CAJZAL010000133.1 Protein Homology CDS 148199 149113 . - 0 ID=cds-WP_014724305.1;Parent=gene-LDO38_RS13980;Dbxref=GenBank:WP_014724305.1;Name=WP_014724305.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724305.1;locus_tag=LDO38_RS13980;product=LysR family transcriptional regulator;protein_id=WP_014724305.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 149368 150150 . + . ID=gene-LDO38_RS13985;Name=LDO38_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13985;old_locus_tag=BVI2075_320151 NZ_CAJZAL010000133.1 Protein Homology CDS 149368 150150 . + 0 ID=cds-WP_011881200.1;Parent=gene-LDO38_RS13985;Dbxref=GenBank:WP_011881200.1;Name=WP_011881200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877371.1;locus_tag=LDO38_RS13985;product=5-oxoprolinase subunit PxpA;protein_id=WP_011881200.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 150167 150409 . + . ID=gene-LDO38_RS13990;Name=LDO38_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13990;old_locus_tag=BVI2075_320152 NZ_CAJZAL010000133.1 Protein Homology CDS 150167 150409 . + 0 ID=cds-WP_034193784.1;Parent=gene-LDO38_RS13990;Dbxref=GenBank:WP_034193784.1;Name=WP_034193784.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187650.1;locus_tag=LDO38_RS13990;product=acetyl-CoA carboxylase;protein_id=WP_034193784.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 150414 151877 . + . ID=gene-LDO38_RS13995;Name=LDO38_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS13995;old_locus_tag=BVI2075_320153 NZ_CAJZAL010000133.1 Protein Homology CDS 150414 151877 . + 0 ID=cds-WP_176043842.1;Parent=gene-LDO38_RS13995;Dbxref=GenBank:WP_176043842.1;Name=WP_176043842.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881198.1;locus_tag=LDO38_RS13995;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_176043842.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 151874 152749 . + . ID=gene-LDO38_RS14000;Name=LDO38_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14000;old_locus_tag=BVI2075_320154 NZ_CAJZAL010000133.1 Protein Homology CDS 151874 152749 . + 0 ID=cds-WP_059567982.1;Parent=gene-LDO38_RS14000;Dbxref=GenBank:WP_059567982.1;Name=WP_059567982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010111384.1;locus_tag=LDO38_RS14000;product=5-oxoprolinase subunit B family protein;protein_id=WP_059567982.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 152739 153734 . + . ID=gene-LDO38_RS14005;Name=LDO38_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14005;old_locus_tag=BVI2075_320155 NZ_CAJZAL010000133.1 Protein Homology CDS 152739 153734 . + 0 ID=cds-WP_059561697.1;Parent=gene-LDO38_RS14005;Dbxref=GenBank:WP_059561697.1;Name=WP_059561697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881196.1;locus_tag=LDO38_RS14005;product=biotin-dependent carboxyltransferase family protein;protein_id=WP_059561697.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 153929 155284 . + . ID=gene-LDO38_RS14010;Name=LDO38_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14010;old_locus_tag=BVI2075_320156 NZ_CAJZAL010000133.1 Protein Homology CDS 153929 155284 . + 0 ID=cds-WP_176314980.1;Parent=gene-LDO38_RS14010;Dbxref=GenBank:WP_176314980.1;Name=WP_176314980.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881195.1;locus_tag=LDO38_RS14010;product=purine-cytosine permease family protein;protein_id=WP_176314980.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 155700 156206 . + . ID=gene-LDO38_RS14020;Name=LDO38_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14020;old_locus_tag=BVI2075_320157 NZ_CAJZAL010000133.1 Protein Homology CDS 155700 156206 . + 0 ID=cds-WP_069246577.1;Parent=gene-LDO38_RS14020;Dbxref=GenBank:WP_069246577.1;Name=WP_069246577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758433.1;locus_tag=LDO38_RS14020;product=GNAT family N-acetyltransferase;protein_id=WP_069246577.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 156246 158240 . - . ID=gene-LDO38_RS14025;Name=LDO38_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14025;old_locus_tag=BVI2075_320158 NZ_CAJZAL010000133.1 Protein Homology CDS 156246 158240 . - 0 ID=cds-WP_069239847.1;Parent=gene-LDO38_RS14025;Dbxref=GenBank:WP_069239847.1;Name=WP_069239847.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485020.1;locus_tag=LDO38_RS14025;product=glycoside hydrolase family 28 protein;protein_id=WP_069239847.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 158748 160106 . + . ID=gene-LDO38_RS14030;Name=LDO38_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14030;old_locus_tag=BVI2075_320160 NZ_CAJZAL010000133.1 Protein Homology CDS 158748 160106 . + 0 ID=cds-WP_014724297.1;Parent=gene-LDO38_RS14030;Dbxref=GenBank:WP_014724297.1;Name=WP_014724297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553920.1;locus_tag=LDO38_RS14030;product=aspartate aminotransferase family protein;protein_id=WP_014724297.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 160341 160958 . - . ID=gene-LDO38_RS14035;Name=LDO38_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14035;old_locus_tag=BVI2075_320161 NZ_CAJZAL010000133.1 Protein Homology CDS 160341 160958 . - 0 ID=cds-WP_014724296.1;Parent=gene-LDO38_RS14035;Dbxref=GenBank:WP_014724296.1;Name=WP_014724296.1;Ontology_term=GO:0003677,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758425.1;locus_tag=LDO38_RS14035;product=3'-5' exonuclease;protein_id=WP_014724296.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 161172 162896 . - . ID=gene-LDO38_RS14040;Name=LDO38_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14040;old_locus_tag=BVI2075_320162 NZ_CAJZAL010000133.1 Protein Homology CDS 161172 162896 . - 0 ID=cds-WP_124259661.1;Parent=gene-LDO38_RS14040;Dbxref=GenBank:WP_124259661.1;Name=WP_124259661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339108.1;locus_tag=LDO38_RS14040;product=tannase/feruloyl esterase family alpha/beta hydrolase;protein_id=WP_124259661.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 162925 164064 . - . ID=gene-LDO38_RS14045;Name=LDO38_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14045;old_locus_tag=BVI2075_320163 NZ_CAJZAL010000133.1 Protein Homology CDS 162925 164064 . - 0 ID=cds-WP_011881189.1;Parent=gene-LDO38_RS14045;Dbxref=GenBank:WP_011881189.1;Name=WP_011881189.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397484.1;locus_tag=LDO38_RS14045;product=porin;protein_id=WP_011881189.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 164132 165337 . - . ID=gene-LDO38_RS14050;Name=mhpT;gbkey=Gene;gene=mhpT;gene_biotype=protein_coding;locus_tag=LDO38_RS14050;old_locus_tag=BVI2075_320164 NZ_CAJZAL010000133.1 Protein Homology CDS 164132 165337 . - 0 ID=cds-WP_011881188.1;Parent=gene-LDO38_RS14050;Dbxref=GenBank:WP_011881188.1;Name=WP_011881188.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mhpT;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004528059.1;locus_tag=LDO38_RS14050;product=3-(3-hydroxy-phenyl)propionate transporter MhpT;protein_id=WP_011881188.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 165774 166268 . - . ID=gene-LDO38_RS14055;Name=LDO38_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14055;old_locus_tag=BVI2075_320165 NZ_CAJZAL010000133.1 Protein Homology CDS 165774 166268 . - 0 ID=cds-WP_011881187.1;Parent=gene-LDO38_RS14055;Dbxref=GenBank:WP_011881187.1;Name=WP_011881187.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881187.1;locus_tag=LDO38_RS14055;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_011881187.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq pseudogene 166340 166495 . + . ID=gene-LDO38_RS14060;Name=LDO38_RS14060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS14060;partial=true;pseudo=true;start_range=.,166340 NZ_CAJZAL010000133.1 Protein Homology CDS 166340 166495 . + 0 ID=cds-LDO38_RS14060;Parent=gene-LDO38_RS14060;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548203.1;locus_tag=LDO38_RS14060;partial=true;product=RNA polymerase subunit sigma-24;pseudo=true;start_range=.,166340;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 166779 168539 . - . ID=gene-LDO38_RS14065;Name=LDO38_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14065;old_locus_tag=BVI2075_320166 NZ_CAJZAL010000133.1 Protein Homology CDS 166779 168539 . - 0 ID=cds-WP_059462807.1;Parent=gene-LDO38_RS14065;Dbxref=GenBank:WP_059462807.1;Name=WP_059462807.1;Ontology_term=GO:0006631,GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881186.1;locus_tag=LDO38_RS14065;product=acyl-CoA dehydrogenase family protein;protein_id=WP_059462807.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 168550 170454 . - . ID=gene-LDO38_RS14070;Name=LDO38_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14070;old_locus_tag=BVI2075_320167 NZ_CAJZAL010000133.1 Protein Homology CDS 168550 170454 . - 0 ID=cds-WP_069246579.1;Parent=gene-LDO38_RS14070;Dbxref=GenBank:WP_069246579.1;Name=WP_069246579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724290.1;locus_tag=LDO38_RS14070;product=feruloyl-CoA synthase;protein_id=WP_069246579.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 170554 172005 . - . ID=gene-LDO38_RS14075;Name=LDO38_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14075;old_locus_tag=BVI2075_320168 NZ_CAJZAL010000133.1 Protein Homology CDS 170554 172005 . - 0 ID=cds-WP_224056477.1;Parent=gene-LDO38_RS14075;Dbxref=GenBank:WP_224056477.1;Name=WP_224056477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724289.1;locus_tag=LDO38_RS14075;product=aldehyde dehydrogenase;protein_id=WP_224056477.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 172039 172866 . - . ID=gene-LDO38_RS14080;Name=LDO38_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14080;old_locus_tag=BVI2075_320169 NZ_CAJZAL010000133.1 Protein Homology CDS 172039 172866 . - 0 ID=cds-WP_011881183.1;Parent=gene-LDO38_RS14080;Dbxref=GenBank:WP_011881183.1;Name=WP_011881183.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009933465.1;locus_tag=LDO38_RS14080;product=p-hydroxycinnamoyl CoA hydratase/lyase;protein_id=WP_011881183.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 173036 173929 . + . ID=gene-LDO38_RS14085;Name=LDO38_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14085;old_locus_tag=BVI2075_320170 NZ_CAJZAL010000133.1 Protein Homology CDS 173036 173929 . + 0 ID=cds-WP_011881182.1;Parent=gene-LDO38_RS14085;Dbxref=GenBank:WP_011881182.1;Name=WP_011881182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881182.1;locus_tag=LDO38_RS14085;product=4-hydroxyphenyl-beta-ketoacyl-CoA hydrolase;protein_id=WP_011881182.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 173955 174857 . - . ID=gene-LDO38_RS14090;Name=LDO38_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14090;old_locus_tag=BVI2075_320171 NZ_CAJZAL010000133.1 Protein Homology CDS 173955 174857 . - 0 ID=cds-WP_175984434.1;Parent=gene-LDO38_RS14090;Dbxref=GenBank:WP_175984434.1;Name=WP_175984434.1;Ontology_term=GO:0005509,GO:0016787,GO:0046872;gbkey=CDS;go_function=calcium ion binding|0005509||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724287.1;locus_tag=LDO38_RS14090;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_175984434.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 174909 175934 . - . ID=gene-LDO38_RS14095;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=LDO38_RS14095;old_locus_tag=BVI2075_320172 NZ_CAJZAL010000133.1 Protein Homology CDS 174909 175934 . - 0 ID=cds-WP_041494045.1;Parent=gene-LDO38_RS14095;Dbxref=GenBank:WP_041494045.1;Name=WP_041494045.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=araH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397496.1;locus_tag=LDO38_RS14095;product=L-arabinose ABC transporter permease AraH;protein_id=WP_041494045.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 176028 177590 . - . ID=gene-LDO38_RS14100;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=LDO38_RS14100;old_locus_tag=BVI2075_320173 NZ_CAJZAL010000133.1 Protein Homology CDS 176028 177590 . - 0 ID=cds-WP_041494252.1;Parent=gene-LDO38_RS14100;Dbxref=GenBank:WP_041494252.1;Name=WP_041494252.1;Ontology_term=GO:0042882,GO:0005524,GO:0015612,GO:0016020;gbkey=CDS;gene=araG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type L-arabinose transporter activity|0015612||IEA;go_process=L-arabinose transmembrane transport|0042882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404694.1;locus_tag=LDO38_RS14100;product=L-arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_041494252.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 177611 178615 . - . ID=gene-LDO38_RS14105;Name=LDO38_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14105;old_locus_tag=BVI2075_320174 NZ_CAJZAL010000133.1 Protein Homology CDS 177611 178615 . - 0 ID=cds-WP_014724284.1;Parent=gene-LDO38_RS14105;Dbxref=GenBank:WP_014724284.1;Name=WP_014724284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758832.1;locus_tag=LDO38_RS14105;product=arabinose ABC transporter substrate-binding protein;protein_id=WP_014724284.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 178696 179625 . - . ID=gene-LDO38_RS14110;Name=LDO38_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14110;old_locus_tag=BVI2075_320175 NZ_CAJZAL010000133.1 Protein Homology CDS 178696 179625 . - 0 ID=cds-WP_011881177.1;Parent=gene-LDO38_RS14110;Dbxref=GenBank:WP_011881177.1;Name=WP_011881177.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750188.1;locus_tag=LDO38_RS14110;product=Gfo/Idh/MocA family protein;protein_id=WP_011881177.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 179650 180579 . - . ID=gene-LDO38_RS14115;Name=LDO38_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14115;old_locus_tag=BVI2075_320176 NZ_CAJZAL010000133.1 Protein Homology CDS 179650 180579 . - 0 ID=cds-WP_014724283.1;Parent=gene-LDO38_RS14115;Dbxref=GenBank:WP_014724283.1;Name=WP_014724283.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881176.1;locus_tag=LDO38_RS14115;product=dihydrodipicolinate synthase family protein;protein_id=WP_014724283.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 180630 181988 . - . ID=gene-LDO38_RS14120;Name=LDO38_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14120;old_locus_tag=BVI2075_320177 NZ_CAJZAL010000133.1 Protein Homology CDS 180630 181988 . - 0 ID=cds-WP_124259660.1;Parent=gene-LDO38_RS14120;Dbxref=GenBank:WP_124259660.1;Name=WP_124259660.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367127.1;locus_tag=LDO38_RS14120;product=MFS transporter;protein_id=WP_124259660.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 182193 183944 . - . ID=gene-LDO38_RS14125;Name=LDO38_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14125;old_locus_tag=BVI2075_320178 NZ_CAJZAL010000133.1 Protein Homology CDS 182193 183944 . - 0 ID=cds-WP_045578345.1;Parent=gene-LDO38_RS14125;Dbxref=GenBank:WP_045578345.1;Name=WP_045578345.1;Ontology_term=GO:0016836,GO:0051536;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494293.1;locus_tag=LDO38_RS14125;product=IlvD/Edd family dehydratase;protein_id=WP_045578345.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 184059 185009 . + . ID=gene-LDO38_RS14130;Name=LDO38_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14130;old_locus_tag=BVI2075_320179 NZ_CAJZAL010000133.1 Protein Homology CDS 184059 185009 . + 0 ID=cds-WP_014724281.1;Parent=gene-LDO38_RS14130;Dbxref=GenBank:WP_014724281.1;Name=WP_014724281.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881173.1;locus_tag=LDO38_RS14130;product=LysR family transcriptional regulator;protein_id=WP_014724281.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 185102 185578 . - . ID=gene-LDO38_RS14135;Name=LDO38_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14135;old_locus_tag=BVI2075_320180 NZ_CAJZAL010000133.1 Protein Homology CDS 185102 185578 . - 0 ID=cds-WP_034193745.1;Parent=gene-LDO38_RS14135;Dbxref=GenBank:WP_034193745.1;Name=WP_034193745.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750183.1;locus_tag=LDO38_RS14135;product=OsmC family protein;protein_id=WP_034193745.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 185673 186095 . - . ID=gene-LDO38_RS14140;Name=LDO38_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14140 NZ_CAJZAL010000133.1 Protein Homology CDS 185673 186095 . - 0 ID=cds-WP_224056478.1;Parent=gene-LDO38_RS14140;Dbxref=GenBank:WP_224056478.1;Name=WP_224056478.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021083.6;locus_tag=LDO38_RS14140;product=hypothetical protein;protein_id=WP_224056478.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 186064 187098 . - . ID=gene-LDO38_RS14145;Name=LDO38_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14145;old_locus_tag=BVI2075_320182 NZ_CAJZAL010000133.1 Protein Homology CDS 186064 187098 . - 0 ID=cds-WP_060090927.1;Parent=gene-LDO38_RS14145;Dbxref=GenBank:WP_060090927.1;Name=WP_060090927.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724278.1;locus_tag=LDO38_RS14145;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_060090927.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 187289 188437 . + . ID=gene-LDO38_RS14150;Name=LDO38_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14150;old_locus_tag=BVI2075_320183 NZ_CAJZAL010000133.1 Protein Homology CDS 187289 188437 . + 0 ID=cds-WP_124259659.1;Parent=gene-LDO38_RS14150;Dbxref=GenBank:WP_124259659.1;Name=WP_124259659.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659870.1;locus_tag=LDO38_RS14150;product=ABC transporter ATP-binding protein;protein_id=WP_124259659.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 188447 190426 . + . ID=gene-LDO38_RS14155;Name=LDO38_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14155;old_locus_tag=BVI2075_320184 NZ_CAJZAL010000133.1 Protein Homology CDS 188447 190426 . + 0 ID=cds-WP_045578348.1;Parent=gene-LDO38_RS14155;Dbxref=GenBank:WP_045578348.1;Name=WP_045578348.1;Ontology_term=GO:0006012,GO:0004565,GO:0046872,GO:0009341;gbkey=CDS;go_component=beta-galactosidase complex|0009341||IEA;go_function=beta-galactosidase activity|0004565||IEA,metal ion binding|0046872||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724277.1;locus_tag=LDO38_RS14155;product=beta-galactosidase;protein_id=WP_045578348.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 190485 191744 . + . ID=gene-LDO38_RS14160;Name=LDO38_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14160;old_locus_tag=BVI2075_320185 NZ_CAJZAL010000133.1 Protein Homology CDS 190485 191744 . + 0 ID=cds-WP_014724276.1;Parent=gene-LDO38_RS14160;Dbxref=GenBank:WP_014724276.1;Name=WP_014724276.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413331.1;locus_tag=LDO38_RS14160;product=ABC transporter substrate-binding protein;protein_id=WP_014724276.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 191803 192759 . + . ID=gene-LDO38_RS14165;Name=LDO38_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14165;old_locus_tag=BVI2075_320187 NZ_CAJZAL010000133.1 Protein Homology CDS 191803 192759 . + 0 ID=cds-WP_046425808.1;Parent=gene-LDO38_RS14165;Dbxref=GenBank:WP_046425808.1;Name=WP_046425808.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339092.1;locus_tag=LDO38_RS14165;product=carbohydrate ABC transporter permease;protein_id=WP_046425808.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 192780 193631 . + . ID=gene-LDO38_RS14170;Name=LDO38_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14170;old_locus_tag=BVI2075_320186 NZ_CAJZAL010000133.1 Protein Homology CDS 192780 193631 . + 0 ID=cds-WP_011881166.1;Parent=gene-LDO38_RS14170;Dbxref=GenBank:WP_011881166.1;Name=WP_011881166.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024176.1;locus_tag=LDO38_RS14170;product=carbohydrate ABC transporter permease;protein_id=WP_011881166.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 193965 194813 . - . ID=gene-LDO38_RS14175;Name=LDO38_RS14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14175;old_locus_tag=BVI2075_320189 NZ_CAJZAL010000133.1 Protein Homology CDS 193965 194813 . - 0 ID=cds-WP_059568661.1;Parent=gene-LDO38_RS14175;Dbxref=GenBank:WP_059568661.1;Name=WP_059568661.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012406476.1;locus_tag=LDO38_RS14175;product=peptidylprolyl isomerase;protein_id=WP_059568661.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 194813 196615 . - . ID=gene-LDO38_RS14180;Name=LDO38_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14180;old_locus_tag=BVI2075_320190 NZ_CAJZAL010000133.1 Protein Homology CDS 194813 196615 . - 0 ID=cds-WP_224056479.1;Parent=gene-LDO38_RS14180;Dbxref=GenBank:WP_224056479.1;Name=WP_224056479.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330381.1;locus_tag=LDO38_RS14180;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_224056479.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 196707 198743 . - . ID=gene-LDO38_RS14185;Name=LDO38_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14185;old_locus_tag=BVI2075_320191 NZ_CAJZAL010000133.1 Protein Homology CDS 196707 198743 . - 0 ID=cds-WP_124259658.1;Parent=gene-LDO38_RS14185;Dbxref=GenBank:WP_124259658.1;Name=WP_124259658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367028.1;locus_tag=LDO38_RS14185;product=filamentous hemagglutinin N-terminal domain-containing protein;protein_id=WP_124259658.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 198802 199374 . - . ID=gene-LDO38_RS14190;Name=LDO38_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14190 NZ_CAJZAL010000133.1 GeneMarkS-2+ CDS 198802 199374 . - 0 ID=cds-WP_124259657.1;Parent=gene-LDO38_RS14190;Dbxref=GenBank:WP_124259657.1;Name=WP_124259657.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS14190;product=hypothetical protein;protein_id=WP_124259657.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 199742 200482 . - . ID=gene-LDO38_RS14195;Name=LDO38_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14195;old_locus_tag=BVI2075_320194 NZ_CAJZAL010000133.1 GeneMarkS-2+ CDS 199742 200482 . - 0 ID=cds-WP_124259656.1;Parent=gene-LDO38_RS14195;Dbxref=GenBank:WP_124259656.1;Name=WP_124259656.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS14195;product=hypothetical protein;protein_id=WP_124259656.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 200508 208349 . - . ID=gene-LDO38_RS14200;Name=LDO38_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14200;old_locus_tag=BVI2075_320197 NZ_CAJZAL010000133.1 Protein Homology CDS 200508 208349 . - 0 ID=cds-WP_124259655.1;Parent=gene-LDO38_RS14200;Dbxref=GenBank:WP_124259655.1;Name=WP_124259655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367400.1;locus_tag=LDO38_RS14200;product=beta strand repeat-containing protein;protein_id=WP_124259655.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 209398 209586 . - . ID=gene-LDO38_RS14205;Name=LDO38_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14205;old_locus_tag=BVI2075_320199 NZ_CAJZAL010000133.1 Protein Homology CDS 209398 209586 . - 0 ID=cds-WP_014724274.1;Parent=gene-LDO38_RS14205;Dbxref=GenBank:WP_014724274.1;Name=WP_014724274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724274.1;locus_tag=LDO38_RS14205;product=hypothetical protein;protein_id=WP_014724274.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 209763 211214 . - . ID=gene-LDO38_RS14210;Name=LDO38_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14210;old_locus_tag=BVI2075_320200 NZ_CAJZAL010000133.1 Protein Homology CDS 209763 211214 . - 0 ID=cds-WP_060044734.1;Parent=gene-LDO38_RS14210;Dbxref=GenBank:WP_060044734.1;Name=WP_060044734.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724273.1;locus_tag=LDO38_RS14210;product=DEAD/DEAH box helicase;protein_id=WP_060044734.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 211284 212765 . - . ID=gene-LDO38_RS14215;Name=LDO38_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14215;old_locus_tag=BVI2075_320201 NZ_CAJZAL010000133.1 Protein Homology CDS 211284 212765 . - 0 ID=cds-WP_124259654.1;Parent=gene-LDO38_RS14215;Dbxref=GenBank:WP_124259654.1;Name=WP_124259654.1;Ontology_term=GO:0018580;gbkey=CDS;go_function=nitronate monooxygenase activity|0018580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881161.1;locus_tag=LDO38_RS14215;product=nitronate monooxygenase;protein_id=WP_124259654.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 213374 213586 . + . ID=gene-LDO38_RS14220;Name=LDO38_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14220;old_locus_tag=BVI2075_320202 NZ_CAJZAL010000133.1 Protein Homology CDS 213374 213586 . + 0 ID=cds-WP_011881160.1;Parent=gene-LDO38_RS14220;Dbxref=GenBank:WP_011881160.1;Name=WP_011881160.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015862.6;locus_tag=LDO38_RS14220;product=heme-binding protein;protein_id=WP_011881160.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 213583 215757 . + . ID=gene-LDO38_RS14225;Name=LDO38_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14225;old_locus_tag=BVI2075_320203 NZ_CAJZAL010000133.1 Protein Homology CDS 213583 215757 . + 0 ID=cds-WP_011881159.1;Parent=gene-LDO38_RS14225;Dbxref=GenBank:WP_011881159.1;Name=WP_011881159.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548774.1;locus_tag=LDO38_RS14225;product=malate synthase G;protein_id=WP_011881159.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq pseudogene 216202 217760 . + . ID=gene-LDO38_RS14230;Name=LDO38_RS14230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS14230;old_locus_tag=BVI2075_320204;pseudo=true NZ_CAJZAL010000133.1 Protein Homology CDS 216202 217760 . + 0 ID=cds-LDO38_RS14230;Parent=gene-LDO38_RS14230;Note=frameshifted;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367143.1;locus_tag=LDO38_RS14230;product=sensor domain-containing diguanylate cyclase;pseudo=true;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 217852 219234 . + . ID=gene-LDO38_RS14235;Name=LDO38_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14235;old_locus_tag=BVI2075_320207 NZ_CAJZAL010000133.1 Protein Homology CDS 217852 219234 . + 0 ID=cds-WP_034193757.1;Parent=gene-LDO38_RS14235;Dbxref=GenBank:WP_034193757.1;Name=WP_034193757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485933.1;locus_tag=LDO38_RS14235;product=cache domain-containing protein;protein_id=WP_034193757.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 219267 219911 . + . ID=gene-LDO38_RS14240;Name=LDO38_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14240;old_locus_tag=BVI2075_320208 NZ_CAJZAL010000133.1 Protein Homology CDS 219267 219911 . + 0 ID=cds-WP_011881156.1;Parent=gene-LDO38_RS14240;Dbxref=GenBank:WP_011881156.1;Name=WP_011881156.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367145.1;locus_tag=LDO38_RS14240;product=response regulator;protein_id=WP_011881156.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 220170 220766 . - . ID=gene-LDO38_RS14245;Name=LDO38_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14245;old_locus_tag=BVI2075_320209 NZ_CAJZAL010000133.1 Protein Homology CDS 220170 220766 . - 0 ID=cds-WP_011881155.1;Parent=gene-LDO38_RS14245;Dbxref=GenBank:WP_011881155.1;Name=WP_011881155.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894421.1;locus_tag=LDO38_RS14245;product=MlaC/ttg2D family ABC transporter substrate-binding protein;protein_id=WP_011881155.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 221095 223728 . + . ID=gene-LDO38_RS14250;Name=LDO38_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14250;old_locus_tag=BVI2075_320210 NZ_CAJZAL010000133.1 Protein Homology CDS 221095 223728 . + 0 ID=cds-WP_224056480.1;Parent=gene-LDO38_RS14250;Dbxref=GenBank:WP_224056480.1;Name=WP_224056480.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330923.1;locus_tag=LDO38_RS14250;product=MMPL family transporter;protein_id=WP_224056480.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 223721 224788 . + . ID=gene-LDO38_RS14255;Name=LDO38_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14255;old_locus_tag=BVI2075_320211 NZ_CAJZAL010000133.1 Protein Homology CDS 223721 224788 . + 0 ID=cds-WP_041494040.1;Parent=gene-LDO38_RS14255;Dbxref=GenBank:WP_041494040.1;Name=WP_041494040.1;Ontology_term=GO:0120010,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=intermembrane phospholipid transfer|0120010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760603.1;locus_tag=LDO38_RS14255;product=MlaA family lipoprotein;protein_id=WP_041494040.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 225023 226186 . - . ID=gene-LDO38_RS14260;Name=LDO38_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14260;old_locus_tag=BVI2075_320212 NZ_CAJZAL010000133.1 Protein Homology CDS 225023 226186 . - 0 ID=cds-WP_034193760.1;Parent=gene-LDO38_RS14260;Dbxref=GenBank:WP_034193760.1;Name=WP_034193760.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881152.1;locus_tag=LDO38_RS14260;product=GGDEF domain-containing protein;protein_id=WP_034193760.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 226374 227081 . - . ID=gene-LDO38_RS14265;Name=LDO38_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14265;old_locus_tag=BVI2075_320213 NZ_CAJZAL010000133.1 Protein Homology CDS 226374 227081 . - 0 ID=cds-WP_069246586.1;Parent=gene-LDO38_RS14265;Dbxref=GenBank:WP_069246586.1;Name=WP_069246586.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496236.1;locus_tag=LDO38_RS14265;product=phosphorylase;protein_id=WP_069246586.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 227085 229058 . - . ID=gene-LDO38_RS14270;Name=shc;gbkey=Gene;gene=shc;gene_biotype=protein_coding;locus_tag=LDO38_RS14270;old_locus_tag=BVI2075_320214 NZ_CAJZAL010000133.1 Protein Homology CDS 227085 229058 . - 0 ID=cds-WP_014724264.1;Parent=gene-LDO38_RS14270;Dbxref=GenBank:WP_014724264.1;Name=WP_014724264.1;Ontology_term=GO:0019746,GO:0016866,GO:0051007;gbkey=CDS;gene=shc;go_function=intramolecular transferase activity|0016866||IEA,squalene-hopene cyclase activity|0051007||IEA;go_process=hopanoid biosynthetic process|0019746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548765.1;locus_tag=LDO38_RS14270;product=squalene--hopene cyclase;protein_id=WP_014724264.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 229074 230330 . - . ID=gene-LDO38_RS14275;Name=hpnE;gbkey=Gene;gene=hpnE;gene_biotype=protein_coding;locus_tag=LDO38_RS14275;old_locus_tag=BVI2075_320215 NZ_CAJZAL010000133.1 Protein Homology CDS 229074 230330 . - 0 ID=cds-WP_069246587.1;Parent=gene-LDO38_RS14275;Dbxref=GenBank:WP_069246587.1;Name=WP_069246587.1;Ontology_term=GO:0016491;gbkey=CDS;gene=hpnE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493654.1;locus_tag=LDO38_RS14275;product=hydroxysqualene dehydroxylase HpnE;protein_id=WP_069246587.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 230335 231183 . - . ID=gene-LDO38_RS14280;Name=hpnD;gbkey=Gene;gene=hpnD;gene_biotype=protein_coding;locus_tag=LDO38_RS14280;old_locus_tag=BVI2075_320216 NZ_CAJZAL010000133.1 Protein Homology CDS 230335 231183 . - 0 ID=cds-WP_014724262.1;Parent=gene-LDO38_RS14280;Dbxref=GenBank:WP_014724262.1;Name=WP_014724262.1;Ontology_term=GO:0016117,GO:0046905;gbkey=CDS;gene=hpnD;go_function=15-cis-phytoene synthase activity|0046905||IEA;go_process=carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404656.1;locus_tag=LDO38_RS14280;product=presqualene diphosphate synthase HpnD;protein_id=WP_014724262.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 231435 231767 . - . ID=gene-LDO38_RS14285;Name=LDO38_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14285;old_locus_tag=BVI2075_320217 NZ_CAJZAL010000133.1 Protein Homology CDS 231435 231767 . - 0 ID=cds-WP_011881147.1;Parent=gene-LDO38_RS14285;Dbxref=GenBank:WP_011881147.1;Name=WP_011881147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766711.1;locus_tag=LDO38_RS14285;product=hypothetical protein;protein_id=WP_011881147.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 231979 232863 . + . ID=gene-LDO38_RS14290;Name=LDO38_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14290;old_locus_tag=BVI2075_320218 NZ_CAJZAL010000133.1 Protein Homology CDS 231979 232863 . + 0 ID=cds-WP_011881146.1;Parent=gene-LDO38_RS14290;Dbxref=GenBank:WP_011881146.1;Name=WP_011881146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766712.1;locus_tag=LDO38_RS14290;product=alpha/beta fold hydrolase;protein_id=WP_011881146.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 232886 233827 . - . ID=gene-LDO38_RS14295;Name=LDO38_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14295;old_locus_tag=BVI2075_320219 NZ_CAJZAL010000133.1 Protein Homology CDS 232886 233827 . - 0 ID=cds-WP_011881145.1;Parent=gene-LDO38_RS14295;Dbxref=GenBank:WP_011881145.1;Name=WP_011881145.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881145.1;locus_tag=LDO38_RS14295;product=GGDEF domain-containing protein;protein_id=WP_011881145.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 233824 234450 . - . ID=gene-LDO38_RS14300;Name=LDO38_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14300;old_locus_tag=BVI2075_320220 NZ_CAJZAL010000133.1 Protein Homology CDS 233824 234450 . - 0 ID=cds-WP_011881144.1;Parent=gene-LDO38_RS14300;Dbxref=GenBank:WP_011881144.1;Name=WP_011881144.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530631.1;locus_tag=LDO38_RS14300;product=chemotaxis protein CheC;protein_id=WP_011881144.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 234443 234811 . - . ID=gene-LDO38_RS14305;Name=LDO38_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14305;old_locus_tag=BVI2075_320221 NZ_CAJZAL010000133.1 Protein Homology CDS 234443 234811 . - 0 ID=cds-WP_011881143.1;Parent=gene-LDO38_RS14305;Dbxref=GenBank:WP_011881143.1;Name=WP_011881143.1;Ontology_term=GO:0000160,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766715.1;locus_tag=LDO38_RS14305;product=response regulator;protein_id=WP_011881143.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 235280 237526 . + . ID=gene-LDO38_RS14310;Name=LDO38_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14310;old_locus_tag=BVI2075_320222 NZ_CAJZAL010000133.1 Protein Homology CDS 235280 237526 . + 0 ID=cds-WP_011881142.1;Parent=gene-LDO38_RS14310;Dbxref=GenBank:WP_011881142.1;Name=WP_011881142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724259.1;locus_tag=LDO38_RS14310;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_011881142.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 237583 238137 . - . ID=gene-LDO38_RS14315;Name=LDO38_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14315;old_locus_tag=BVI2075_320223 NZ_CAJZAL010000133.1 Protein Homology CDS 237583 238137 . - 0 ID=cds-WP_046425781.1;Parent=gene-LDO38_RS14315;Dbxref=GenBank:WP_046425781.1;Name=WP_046425781.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480199.1;locus_tag=LDO38_RS14315;product=NADPH-dependent FMN reductase;protein_id=WP_046425781.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 238499 239095 . + . ID=gene-LDO38_RS14320;Name=LDO38_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14320;old_locus_tag=BVI2075_320225 NZ_CAJZAL010000133.1 Protein Homology CDS 238499 239095 . + 0 ID=cds-WP_011881140.1;Parent=gene-LDO38_RS14320;Dbxref=GenBank:WP_011881140.1;Name=WP_011881140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900709.1;locus_tag=LDO38_RS14320;product=RNA polymerase factor sigma-70;protein_id=WP_011881140.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 239076 239285 . + . ID=gene-LDO38_RS14325;Name=LDO38_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14325;old_locus_tag=BVI2075_320226 NZ_CAJZAL010000133.1 Protein Homology CDS 239076 239285 . + 0 ID=cds-WP_059476114.1;Parent=gene-LDO38_RS14325;Dbxref=GenBank:WP_059476114.1;Name=WP_059476114.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881139.1;locus_tag=LDO38_RS14325;product=zf-HC2 domain-containing protein;protein_id=WP_059476114.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 239470 239826 . - . ID=gene-LDO38_RS14330;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=LDO38_RS14330;old_locus_tag=BVI2075_320227 NZ_CAJZAL010000133.1 Protein Homology CDS 239470 239826 . - 0 ID=cds-WP_059476113.1;Parent=gene-LDO38_RS14330;Dbxref=GenBank:WP_059476113.1;Name=WP_059476113.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724258.1;locus_tag=LDO38_RS14330;product=arsenate reductase (glutaredoxin);protein_id=WP_059476113.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 240891 241553 . + . ID=gene-LDO38_RS14335;Name=parA;gbkey=Gene;gene=parA;gene_biotype=protein_coding;locus_tag=LDO38_RS14335;old_locus_tag=BVI2075_320229 NZ_CAJZAL010000133.1 Protein Homology CDS 240891 241553 . + 0 ID=cds-WP_059476112.1;Parent=gene-LDO38_RS14335;Dbxref=GenBank:WP_059476112.1;Name=WP_059476112.1;gbkey=CDS;gene=parA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900706.1;locus_tag=LDO38_RS14335;product=ParA family partition ATPase;protein_id=WP_059476112.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 241577 242638 . + . ID=gene-LDO38_RS14340;Name=LDO38_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14340;old_locus_tag=BVI2075_320230 NZ_CAJZAL010000133.1 Protein Homology CDS 241577 242638 . + 0 ID=cds-WP_014724257.1;Parent=gene-LDO38_RS14340;Dbxref=GenBank:WP_014724257.1;Name=WP_014724257.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194498.1;locus_tag=LDO38_RS14340;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_014724257.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 242734 244098 . - . ID=gene-LDO38_RS14345;Name=LDO38_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14345;old_locus_tag=BVI2075_320231 NZ_CAJZAL010000133.1 Protein Homology CDS 242734 244098 . - 0 ID=cds-WP_011881135.1;Parent=gene-LDO38_RS14345;Dbxref=GenBank:WP_011881135.1;Name=WP_011881135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397554.1;locus_tag=LDO38_RS14345;product=replication initiation protein;protein_id=WP_011881135.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 245899 247080 . + . ID=gene-LDO38_RS14350;Name=LDO38_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14350;old_locus_tag=BVI2075_320235 NZ_CAJZAL010000133.1 Protein Homology CDS 245899 247080 . + 0 ID=cds-WP_045578359.1;Parent=gene-LDO38_RS14350;Dbxref=GenBank:WP_045578359.1;Name=WP_045578359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751660.1;locus_tag=LDO38_RS14350;product=DNA-binding protein;protein_id=WP_045578359.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 247221 248234 . - . ID=gene-LDO38_RS14355;Name=LDO38_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14355;old_locus_tag=BVI2075_320236 NZ_CAJZAL010000133.1 Protein Homology CDS 247221 248234 . - 0 ID=cds-WP_041494038.1;Parent=gene-LDO38_RS14355;Dbxref=GenBank:WP_041494038.1;Name=WP_041494038.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339070.1;locus_tag=LDO38_RS14355;product=tyrosine-type recombinase/integrase;protein_id=WP_041494038.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 248335 248712 . - . ID=gene-LDO38_RS14360;Name=LDO38_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14360;old_locus_tag=BVI2075_320237 NZ_CAJZAL010000133.1 Protein Homology CDS 248335 248712 . - 0 ID=cds-WP_011881132.1;Parent=gene-LDO38_RS14360;Dbxref=GenBank:WP_011881132.1;Name=WP_011881132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548749.1;locus_tag=LDO38_RS14360;product=DUF2471 family protein;protein_id=WP_011881132.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 248840 249451 . - . ID=gene-LDO38_RS14365;Name=LDO38_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14365;old_locus_tag=BVI2075_320238 NZ_CAJZAL010000133.1 Protein Homology CDS 248840 249451 . - 0 ID=cds-WP_011881131.1;Parent=gene-LDO38_RS14365;Dbxref=GenBank:WP_011881131.1;Name=WP_011881131.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009967364.1;locus_tag=LDO38_RS14365;product=helix-turn-helix domain-containing protein;protein_id=WP_011881131.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 249612 250811 . + . ID=gene-LDO38_RS14370;Name=LDO38_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14370;old_locus_tag=BVI2075_320240 NZ_CAJZAL010000133.1 Protein Homology CDS 249612 250811 . + 0 ID=cds-WP_011881130.1;Parent=gene-LDO38_RS14370;Dbxref=GenBank:WP_011881130.1;Name=WP_011881130.1;Ontology_term=GO:0009058,GO:0008890,GO:0030170;gbkey=CDS;go_function=glycine C-acetyltransferase activity|0008890||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411924.1;locus_tag=LDO38_RS14370;product=glycine C-acetyltransferase;protein_id=WP_011881130.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 250825 251853 . + . ID=gene-LDO38_RS14375;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=LDO38_RS14375;old_locus_tag=BVI2075_320241 NZ_CAJZAL010000133.1 Protein Homology CDS 250825 251853 . + 0 ID=cds-WP_011881129.1;Parent=gene-LDO38_RS14375;Dbxref=GenBank:WP_011881129.1;Name=WP_011881129.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356765.1;locus_tag=LDO38_RS14375;product=L-threonine 3-dehydrogenase;protein_id=WP_011881129.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 252574 253188 . + . ID=gene-LDO38_RS14380;Name=LDO38_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14380;old_locus_tag=BVI2075_320244 NZ_CAJZAL010000133.1 Protein Homology CDS 252574 253188 . + 0 ID=cds-WP_224056481.1;Parent=gene-LDO38_RS14380;Dbxref=GenBank:WP_224056481.1;Name=WP_224056481.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881128.1;locus_tag=LDO38_RS14380;product=TetR/AcrR family transcriptional regulator;protein_id=WP_224056481.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 253248 253727 . + . ID=gene-LDO38_RS14385;Name=LDO38_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14385;old_locus_tag=BVI2075_320246 NZ_CAJZAL010000133.1 Protein Homology CDS 253248 253727 . + 0 ID=cds-WP_045578361.1;Parent=gene-LDO38_RS14385;Dbxref=GenBank:WP_045578361.1;Name=WP_045578361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894511.1;locus_tag=LDO38_RS14385;product=DUF1348 family protein;protein_id=WP_045578361.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 254020 255105 . - . ID=gene-LDO38_RS14390;Name=LDO38_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14390;old_locus_tag=BVI2075_320247 NZ_CAJZAL010000133.1 Protein Homology CDS 254020 255105 . - 0 ID=cds-WP_034193772.1;Parent=gene-LDO38_RS14390;Dbxref=GenBank:WP_034193772.1;Name=WP_034193772.1;Ontology_term=GO:0046395,GO:0009027,GO:0051287;gbkey=CDS;go_function=tartrate dehydrogenase activity|0009027||IEA,NAD binding|0051287||IEA;go_process=carboxylic acid catabolic process|0046395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659912.1;locus_tag=LDO38_RS14390;product=tartrate dehydrogenase;protein_id=WP_034193772.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 255224 256147 . + . ID=gene-LDO38_RS14395;Name=LDO38_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14395;old_locus_tag=BVI2075_320248 NZ_CAJZAL010000133.1 Protein Homology CDS 255224 256147 . + 0 ID=cds-WP_011881125.1;Parent=gene-LDO38_RS14395;Dbxref=GenBank:WP_011881125.1;Name=WP_011881125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881125.1;locus_tag=LDO38_RS14395;product=LysR substrate-binding domain-containing protein;protein_id=WP_011881125.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 256364 257311 . - . ID=gene-LDO38_RS14400;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=LDO38_RS14400;old_locus_tag=BVI2075_320250 NZ_CAJZAL010000133.1 Protein Homology CDS 256364 257311 . - 0 ID=cds-WP_011881124.1;Parent=gene-LDO38_RS14400;Dbxref=GenBank:WP_011881124.1;Name=WP_011881124.1;Ontology_term=GO:0006526,GO:0003942,GO:0005737;gbkey=CDS;gene=argC;go_component=cytoplasm|0005737||IEA;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881124.1;locus_tag=LDO38_RS14400;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_011881124.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 257430 258314 . + . ID=gene-LDO38_RS14405;Name=LDO38_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14405;old_locus_tag=BVI2075_320251 NZ_CAJZAL010000133.1 Protein Homology CDS 257430 258314 . + 0 ID=cds-WP_011881123.1;Parent=gene-LDO38_RS14405;Dbxref=GenBank:WP_011881123.1;Name=WP_011881123.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548739.1;locus_tag=LDO38_RS14405;product=LysR family transcriptional regulator;protein_id=WP_011881123.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 258379 258843 . - . ID=gene-LDO38_RS14410;Name=LDO38_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14410;old_locus_tag=BVI2075_320252 NZ_CAJZAL010000133.1 Protein Homology CDS 258379 258843 . - 0 ID=cds-WP_011881122.1;Parent=gene-LDO38_RS14410;Dbxref=GenBank:WP_011881122.1;Name=WP_011881122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751648.1;locus_tag=LDO38_RS14410;product=hypothetical protein;protein_id=WP_011881122.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 258901 260118 . - . ID=gene-LDO38_RS14415;Name=LDO38_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14415;old_locus_tag=BVI2075_320253 NZ_CAJZAL010000133.1 Protein Homology CDS 258901 260118 . - 0 ID=cds-WP_011881121.1;Parent=gene-LDO38_RS14415;Dbxref=GenBank:WP_011881121.1;Name=WP_011881121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194462.1;locus_tag=LDO38_RS14415;product=DUF3734 domain-containing protein;protein_id=WP_011881121.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 260249 261034 . - . ID=gene-LDO38_RS14420;Name=LDO38_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14420;old_locus_tag=BVI2075_320254 NZ_CAJZAL010000133.1 Protein Homology CDS 260249 261034 . - 0 ID=cds-WP_014724248.1;Parent=gene-LDO38_RS14420;Dbxref=GenBank:WP_014724248.1;Name=WP_014724248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604033.1;locus_tag=LDO38_RS14420;product=3-hydroxybutyrate dehydrogenase;protein_id=WP_014724248.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 261088 261828 . - . ID=gene-LDO38_RS14425;Name=LDO38_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14425;old_locus_tag=BVI2075_320255 NZ_CAJZAL010000133.1 Protein Homology CDS 261088 261828 . - 0 ID=cds-WP_126220694.1;Parent=gene-LDO38_RS14425;Dbxref=GenBank:WP_126220694.1;Name=WP_126220694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724247.1;locus_tag=LDO38_RS14425;product=acetoacetate decarboxylase;protein_id=WP_126220694.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 262266 262847 . + . ID=gene-LDO38_RS14430;Name=LDO38_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14430;old_locus_tag=BVI2075_320256 NZ_CAJZAL010000133.1 Protein Homology CDS 262266 262847 . + 0 ID=cds-WP_011881118.1;Parent=gene-LDO38_RS14430;Dbxref=GenBank:WP_011881118.1;Name=WP_011881118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411912.1;locus_tag=LDO38_RS14430;product=undecaprenyl-diphosphatase;protein_id=WP_011881118.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 262885 263109 . - . ID=gene-LDO38_RS14435;Name=LDO38_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14435;old_locus_tag=BVI2075_320257 NZ_CAJZAL010000133.1 Protein Homology CDS 262885 263109 . - 0 ID=cds-WP_011881117.1;Parent=gene-LDO38_RS14435;Dbxref=GenBank:WP_011881117.1;Name=WP_011881117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756670.1;locus_tag=LDO38_RS14435;product=hypothetical protein;protein_id=WP_011881117.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 263227 264060 . - . ID=gene-LDO38_RS14440;Name=LDO38_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14440;old_locus_tag=BVI2075_320258 NZ_CAJZAL010000133.1 Protein Homology CDS 263227 264060 . - 0 ID=cds-WP_224056482.1;Parent=gene-LDO38_RS14440;Dbxref=GenBank:WP_224056482.1;Name=WP_224056482.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724244.1;locus_tag=LDO38_RS14440;product=siderophore-interacting protein;protein_id=WP_224056482.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 264098 264808 . - . ID=gene-LDO38_RS14445;Name=LDO38_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14445;old_locus_tag=BVI2075_320260 NZ_CAJZAL010000133.1 Protein Homology CDS 264098 264808 . - 0 ID=cds-WP_224056483.1;Parent=gene-LDO38_RS14445;Dbxref=GenBank:WP_224056483.1;Name=WP_224056483.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548732.1;locus_tag=LDO38_RS14445;product=PadR family transcriptional regulator;protein_id=WP_224056483.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 265468 265980 . + . ID=gene-LDO38_RS14450;Name=LDO38_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14450;old_locus_tag=BVI2075_320262 NZ_CAJZAL010000133.1 Protein Homology CDS 265468 265980 . + 0 ID=cds-WP_011881114.1;Parent=gene-LDO38_RS14450;Dbxref=GenBank:WP_011881114.1;Name=WP_011881114.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881114.1;locus_tag=LDO38_RS14450;product=fimbrial protein;protein_id=WP_011881114.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 266045 268522 . + . ID=gene-LDO38_RS14455;Name=LDO38_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14455;old_locus_tag=BVI2075_320263 NZ_CAJZAL010000133.1 Protein Homology CDS 266045 268522 . + 0 ID=cds-WP_224056484.1;Parent=gene-LDO38_RS14455;Dbxref=GenBank:WP_224056484.1;Name=WP_224056484.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881113.1;locus_tag=LDO38_RS14455;product=fimbria/pilus outer membrane usher protein;protein_id=WP_224056484.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 268523 269260 . + . ID=gene-LDO38_RS14460;Name=LDO38_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14460;old_locus_tag=BVI2075_320265 NZ_CAJZAL010000133.1 Protein Homology CDS 268523 269260 . + 0 ID=cds-WP_045578363.1;Parent=gene-LDO38_RS14460;Dbxref=GenBank:WP_045578363.1;Name=WP_045578363.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724239.1;locus_tag=LDO38_RS14460;product=fimbrial biogenesis chaperone;protein_id=WP_045578363.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 269257 270294 . + . ID=gene-LDO38_RS14465;Name=LDO38_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14465;old_locus_tag=BVI2075_320264 NZ_CAJZAL010000133.1 Protein Homology CDS 269257 270294 . + 0 ID=cds-WP_011881111.1;Parent=gene-LDO38_RS14465;Dbxref=GenBank:WP_011881111.1;Name=WP_011881111.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881111.1;locus_tag=LDO38_RS14465;product=fimbrial protein;protein_id=WP_011881111.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 270708 271859 . + . ID=gene-LDO38_RS14470;Name=LDO38_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14470;old_locus_tag=BVI2075_320266 NZ_CAJZAL010000133.1 Protein Homology CDS 270708 271859 . + 0 ID=cds-WP_060092068.1;Parent=gene-LDO38_RS14470;Dbxref=GenBank:WP_060092068.1;Name=WP_060092068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724238.1;locus_tag=LDO38_RS14470;product=TDT family transporter;protein_id=WP_060092068.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 271964 272950 . + . ID=gene-LDO38_RS14475;Name=LDO38_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14475;old_locus_tag=BVI2075_320267 NZ_CAJZAL010000133.1 Protein Homology CDS 271964 272950 . + 0 ID=cds-WP_224056485.1;Parent=gene-LDO38_RS14475;Dbxref=GenBank:WP_224056485.1;Name=WP_224056485.1;Ontology_term=GO:0006108,GO:0016615;gbkey=CDS;go_function=malate dehydrogenase activity|0016615||IEA;go_process=malate metabolic process|0006108||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881108.1;locus_tag=LDO38_RS14475;product=malate dehydrogenase;protein_id=WP_224056485.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 273012 273818 . + . ID=gene-LDO38_RS14480;Name=LDO38_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14480;old_locus_tag=BVI2075_320269 NZ_CAJZAL010000133.1 Protein Homology CDS 273012 273818 . + 0 ID=cds-WP_196480895.1;Parent=gene-LDO38_RS14480;Dbxref=GenBank:WP_196480895.1;Name=WP_196480895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724236.1;locus_tag=LDO38_RS14480;product=substrate-binding domain-containing protein;protein_id=WP_196480895.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 273901 274083 . + . ID=gene-LDO38_RS30535;Name=LDO38_RS30535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30535 NZ_CAJZAL010000133.1 GeneMarkS-2+ CDS 273901 274083 . + 0 ID=cds-WP_144410637.1;Parent=gene-LDO38_RS30535;Dbxref=GenBank:WP_144410637.1;Name=WP_144410637.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30535;product=hypothetical protein;protein_id=WP_144410637.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 274589 275539 . + . ID=gene-LDO38_RS14485;Name=LDO38_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14485;old_locus_tag=BVI2075_320270 NZ_CAJZAL010000133.1 Protein Homology CDS 274589 275539 . + 0 ID=cds-WP_059460622.1;Parent=gene-LDO38_RS14485;Dbxref=GenBank:WP_059460622.1;Name=WP_059460622.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724235.1;locus_tag=LDO38_RS14485;product=helix-turn-helix domain-containing protein;protein_id=WP_059460622.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 275661 276092 . + . ID=gene-LDO38_RS14490;Name=LDO38_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14490;old_locus_tag=BVI2075_320271 NZ_CAJZAL010000133.1 Protein Homology CDS 275661 276092 . + 0 ID=cds-WP_059889689.1;Parent=gene-LDO38_RS14490;Dbxref=GenBank:WP_059889689.1;Name=WP_059889689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881105.1;locus_tag=LDO38_RS14490;product=DUF3331 domain-containing protein;protein_id=WP_059889689.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 276212 277120 . - . ID=gene-LDO38_RS14495;Name=LDO38_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14495;old_locus_tag=BVI2075_320272 NZ_CAJZAL010000133.1 Protein Homology CDS 276212 277120 . - 0 ID=cds-WP_011881104.1;Parent=gene-LDO38_RS14495;Dbxref=GenBank:WP_011881104.1;Name=WP_011881104.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724233.1;locus_tag=LDO38_RS14495;product=LysR family transcriptional regulator;protein_id=WP_011881104.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 277217 277561 . - . ID=gene-LDO38_RS14500;Name=LDO38_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14500;old_locus_tag=BVI2075_320273 NZ_CAJZAL010000133.1 Protein Homology CDS 277217 277561 . - 0 ID=cds-WP_011881103.1;Parent=gene-LDO38_RS14500;Dbxref=GenBank:WP_011881103.1;Name=WP_011881103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757462.1;locus_tag=LDO38_RS14500;product=DUF4148 domain-containing protein;protein_id=WP_011881103.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 277667 278656 . - . ID=gene-LDO38_RS14505;Name=LDO38_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14505;old_locus_tag=BVI2075_320274 NZ_CAJZAL010000133.1 Protein Homology CDS 277667 278656 . - 0 ID=cds-WP_069224807.1;Parent=gene-LDO38_RS14505;Dbxref=GenBank:WP_069224807.1;Name=WP_069224807.1;Ontology_term=GO:0006119,GO:0009055,GO:0005886,GO:0070069;gbkey=CDS;go_component=plasma membrane|0005886||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=oxidative phosphorylation|0006119||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012404928.1;locus_tag=LDO38_RS14505;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_069224807.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 278711 280105 . - . ID=gene-LDO38_RS14510;Name=LDO38_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14510;old_locus_tag=BVI2075_320275 NZ_CAJZAL010000133.1 Protein Homology CDS 278711 280105 . - 0 ID=cds-WP_060122676.1;Parent=gene-LDO38_RS14510;Dbxref=GenBank:WP_060122676.1;Name=WP_060122676.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881101.1;locus_tag=LDO38_RS14510;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_060122676.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 280095 282443 . - . ID=gene-LDO38_RS14515;Name=LDO38_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14515;old_locus_tag=BVI2075_320276 NZ_CAJZAL010000133.1 Protein Homology CDS 280095 282443 . - 0 ID=cds-WP_069246398.1;Parent=gene-LDO38_RS14515;Dbxref=GenBank:WP_069246398.1;Name=WP_069246398.1;Ontology_term=GO:0016491,GO:0030151,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724231.1;locus_tag=LDO38_RS14515;product=FdhF/YdeP family oxidoreductase;protein_id=WP_069246398.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 282580 282933 . - . ID=gene-LDO38_RS14520;Name=LDO38_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14520;old_locus_tag=BVI2075_320278 NZ_CAJZAL010000133.1 Protein Homology CDS 282580 282933 . - 0 ID=cds-WP_069240571.1;Parent=gene-LDO38_RS14520;Dbxref=GenBank:WP_069240571.1;Name=WP_069240571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881099.1;locus_tag=LDO38_RS14520;product=hypothetical protein;protein_id=WP_069240571.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 283321 284265 . - . ID=gene-LDO38_RS14525;Name=LDO38_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14525;old_locus_tag=BVI2075_320279 NZ_CAJZAL010000133.1 Protein Homology CDS 283321 284265 . - 0 ID=cds-WP_011881098.1;Parent=gene-LDO38_RS14525;Dbxref=GenBank:WP_011881098.1;Name=WP_011881098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756658.1;locus_tag=LDO38_RS14525;product=aldo/keto reductase;protein_id=WP_011881098.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 284558 285178 . - . ID=gene-LDO38_RS14530;Name=LDO38_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14530;old_locus_tag=BVI2075_320280 NZ_CAJZAL010000133.1 Protein Homology CDS 284558 285178 . - 0 ID=cds-WP_034193423.1;Parent=gene-LDO38_RS14530;Dbxref=GenBank:WP_034193423.1;Name=WP_034193423.1;Ontology_term=GO:0006865,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894570.1;locus_tag=LDO38_RS14530;product=LysE/ArgO family amino acid transporter;protein_id=WP_034193423.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 285283 286176 . + . ID=gene-LDO38_RS14535;Name=LDO38_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14535;old_locus_tag=BVI2075_320281 NZ_CAJZAL010000133.1 Protein Homology CDS 285283 286176 . + 0 ID=cds-WP_059460625.1;Parent=gene-LDO38_RS14535;Dbxref=GenBank:WP_059460625.1;Name=WP_059460625.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028391.1;locus_tag=LDO38_RS14535;product=LysR family transcriptional regulator ArgP;protein_id=WP_059460625.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 286227 286973 . - . ID=gene-LDO38_RS14540;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=LDO38_RS14540;old_locus_tag=BVI2075_320282 NZ_CAJZAL010000133.1 Protein Homology CDS 286227 286973 . - 0 ID=cds-WP_011881094.1;Parent=gene-LDO38_RS14540;Dbxref=GenBank:WP_011881094.1;Name=WP_011881094.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=fnr;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894572.1;locus_tag=LDO38_RS14540;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_011881094.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 287099 287566 . - . ID=gene-LDO38_RS14545;Name=LDO38_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14545;old_locus_tag=BVI2075_320283 NZ_CAJZAL010000133.1 Protein Homology CDS 287099 287566 . - 0 ID=cds-WP_011881093.1;Parent=gene-LDO38_RS14545;Dbxref=GenBank:WP_011881093.1;Name=WP_011881093.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881093.1;locus_tag=LDO38_RS14545;product=universal stress protein;protein_id=WP_011881093.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 287747 288010 . - . ID=gene-LDO38_RS14550;Name=LDO38_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14550;old_locus_tag=BVI2075_320284 NZ_CAJZAL010000133.1 GeneMarkS-2+ CDS 287747 288010 . - 0 ID=cds-WP_011881092.1;Parent=gene-LDO38_RS14550;Dbxref=GenBank:WP_011881092.1;Name=WP_011881092.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS14550;product=hypothetical protein;protein_id=WP_011881092.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 288249 288482 . + . ID=gene-LDO38_RS14555;Name=LDO38_RS14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14555;old_locus_tag=BVI2075_320285 NZ_CAJZAL010000133.1 Protein Homology CDS 288249 288482 . + 0 ID=cds-WP_011659947.1;Parent=gene-LDO38_RS14555;Dbxref=GenBank:WP_011659947.1;Name=WP_011659947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900672.1;locus_tag=LDO38_RS14555;product=hypothetical protein;protein_id=WP_011659947.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 288618 289538 . + . ID=gene-LDO38_RS14560;Name=epsC;gbkey=Gene;gene=epsC;gene_biotype=protein_coding;locus_tag=LDO38_RS14560;old_locus_tag=BVI2075_320286 NZ_CAJZAL010000133.1 Protein Homology CDS 288618 289538 . + 0 ID=cds-WP_041494248.1;Parent=gene-LDO38_RS14560;Dbxref=GenBank:WP_041494248.1;Name=WP_041494248.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=epsC;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756651.1;locus_tag=LDO38_RS14560;product=serine O-acetyltransferase EpsC;protein_id=WP_041494248.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 289717 290520 . - . ID=gene-LDO38_RS14565;Name=LDO38_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14565;old_locus_tag=BVI2075_320287 NZ_CAJZAL010000133.1 Protein Homology CDS 289717 290520 . - 0 ID=cds-WP_011881090.1;Parent=gene-LDO38_RS14565;Dbxref=GenBank:WP_011881090.1;Name=WP_011881090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494586.1;locus_tag=LDO38_RS14565;product=SDR family oxidoreductase;protein_id=WP_011881090.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 290520 291149 . - . ID=gene-LDO38_RS14570;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=LDO38_RS14570;old_locus_tag=BVI2075_320288 NZ_CAJZAL010000133.1 Protein Homology CDS 290520 291149 . - 0 ID=cds-WP_011881089.1;Parent=gene-LDO38_RS14570;Dbxref=GenBank:WP_011881089.1;Name=WP_011881089.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756649.1;locus_tag=LDO38_RS14570;product=GTP cyclohydrolase I FolE;protein_id=WP_011881089.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 291261 292187 . - . ID=gene-LDO38_RS14575;Name=LDO38_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14575;old_locus_tag=BVI2075_320289 NZ_CAJZAL010000133.1 Protein Homology CDS 291261 292187 . - 0 ID=cds-WP_011881088.1;Parent=gene-LDO38_RS14575;Dbxref=GenBank:WP_011881088.1;Name=WP_011881088.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532449.1;locus_tag=LDO38_RS14575;product=LysR family transcriptional regulator;protein_id=WP_011881088.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 292304 293536 . + . ID=gene-LDO38_RS14580;Name=pobA;gbkey=Gene;gene=pobA;gene_biotype=protein_coding;locus_tag=LDO38_RS14580;old_locus_tag=BVI2075_320290 NZ_CAJZAL010000133.1 Protein Homology CDS 292304 293536 . + 0 ID=cds-WP_069246399.1;Parent=gene-LDO38_RS14580;Dbxref=GenBank:WP_069246399.1;Name=WP_069246399.1;Ontology_term=GO:0043639,GO:0018659,GO:0050660;gbkey=CDS;gene=pobA;go_function=4-hydroxybenzoate 3-monooxygenase activity|0018659||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=benzoate catabolic process|0043639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766752.1;locus_tag=LDO38_RS14580;product=4-hydroxybenzoate 3-monooxygenase;protein_id=WP_069246399.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 293679 294392 . + . ID=gene-LDO38_RS14585;Name=LDO38_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14585;old_locus_tag=BVI2075_320292 NZ_CAJZAL010000133.1 Protein Homology CDS 293679 294392 . + 0 ID=cds-WP_011881086.1;Parent=gene-LDO38_RS14585;Dbxref=GenBank:WP_011881086.1;Name=WP_011881086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009945766.1;locus_tag=LDO38_RS14585;product=3-oxoacid CoA-transferase subunit A;protein_id=WP_011881086.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 294461 295117 . + . ID=gene-LDO38_RS14590;Name=LDO38_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14590;old_locus_tag=BVI2075_320291 NZ_CAJZAL010000133.1 Protein Homology CDS 294461 295117 . + 0 ID=cds-WP_011881085.1;Parent=gene-LDO38_RS14590;Dbxref=GenBank:WP_011881085.1;Name=WP_011881085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194517.1;locus_tag=LDO38_RS14590;product=CoA transferase subunit B;protein_id=WP_011881085.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 295206 296564 . + . ID=gene-LDO38_RS14595;Name=LDO38_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14595;old_locus_tag=BVI2075_320293 NZ_CAJZAL010000133.1 Protein Homology CDS 295206 296564 . + 0 ID=cds-WP_011881084.1;Parent=gene-LDO38_RS14595;Dbxref=GenBank:WP_011881084.1;Name=WP_011881084.1;Ontology_term=GO:0019619,GO:0047472;gbkey=CDS;go_function=3-carboxy-cis%2Ccis-muconate cycloisomerase activity|0047472||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480130.1;locus_tag=LDO38_RS14595;product=3-carboxy-cis%2Ccis-muconate cycloisomerase;protein_id=WP_011881084.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 296581 297366 . + . ID=gene-LDO38_RS14600;Name=pcaD;gbkey=Gene;gene=pcaD;gene_biotype=protein_coding;locus_tag=LDO38_RS14600;old_locus_tag=BVI2075_320294 NZ_CAJZAL010000133.1 Protein Homology CDS 296581 297366 . + 0 ID=cds-WP_059740511.1;Parent=gene-LDO38_RS14600;Dbxref=GenBank:WP_059740511.1;Name=WP_059740511.1;Ontology_term=GO:0042952,GO:0047570;gbkey=CDS;gene=pcaD;go_function=3-oxoadipate enol-lactonase activity|0047570||IEA;go_process=beta-ketoadipate pathway|0042952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010117629.1;locus_tag=LDO38_RS14600;product=3-oxoadipate enol-lactonase;protein_id=WP_059740511.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 297377 297763 . + . ID=gene-LDO38_RS14605;Name=pcaC;gbkey=Gene;gene=pcaC;gene_biotype=protein_coding;locus_tag=LDO38_RS14605;old_locus_tag=BVI2075_320295 NZ_CAJZAL010000133.1 Protein Homology CDS 297377 297763 . + 0 ID=cds-WP_011881082.1;Parent=gene-LDO38_RS14605;Dbxref=GenBank:WP_011881082.1;Name=WP_011881082.1;Ontology_term=GO:0047575;gbkey=CDS;gene=pcaC;go_function=4-carboxymuconolactone decarboxylase activity|0047575||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749282.1;locus_tag=LDO38_RS14605;product=4-carboxymuconolactone decarboxylase;protein_id=WP_011881082.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 298001 299359 . + . ID=gene-LDO38_RS14610;Name=LDO38_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14610;old_locus_tag=BVI2075_320296 NZ_CAJZAL010000133.1 Protein Homology CDS 298001 299359 . + 0 ID=cds-WP_059462708.1;Parent=gene-LDO38_RS14610;Dbxref=GenBank:WP_059462708.1;Name=WP_059462708.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756642.1;locus_tag=LDO38_RS14610;product=MFS transporter;protein_id=WP_059462708.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 299481 299729 . - . ID=gene-LDO38_RS14615;Name=LDO38_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14615;old_locus_tag=BVI2075_320297 NZ_CAJZAL010000133.1 Protein Homology CDS 299481 299729 . - 0 ID=cds-WP_011881080.1;Parent=gene-LDO38_RS14615;Dbxref=GenBank:WP_011881080.1;Name=WP_011881080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749284.1;locus_tag=LDO38_RS14615;product=hypothetical protein;protein_id=WP_011881080.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 299840 300457 . - . ID=gene-LDO38_RS14620;Name=LDO38_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14620;old_locus_tag=BVI2075_320298 NZ_CAJZAL010000133.1 Protein Homology CDS 299840 300457 . - 0 ID=cds-WP_011881079.1;Parent=gene-LDO38_RS14620;Dbxref=GenBank:WP_011881079.1;Name=WP_011881079.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480126.1;locus_tag=LDO38_RS14620;product=LysE family translocator;protein_id=WP_011881079.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq pseudogene 301228 301749 . + . ID=gene-LDO38_RS14630;Name=LDO38_RS14630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS14630;old_locus_tag=BVI2075_320302;partial=true;pseudo=true;start_range=.,301228 NZ_CAJZAL010000133.1 Protein Homology CDS 301228 301749 . + 0 ID=cds-LDO38_RS14630;Parent=gene-LDO38_RS14630;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750208.1;locus_tag=LDO38_RS14630;partial=true;product=amidohydrolase family protein;pseudo=true;start_range=.,301228;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 301771 302634 . - . ID=gene-LDO38_RS14635;Name=LDO38_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14635;old_locus_tag=BVI2075_320303 NZ_CAJZAL010000133.1 Protein Homology CDS 301771 302634 . - 0 ID=cds-WP_011881077.1;Parent=gene-LDO38_RS14635;Dbxref=GenBank:WP_011881077.1;Name=WP_011881077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881077.1;locus_tag=LDO38_RS14635;product=LysR substrate-binding domain-containing protein;protein_id=WP_011881077.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 302918 303655 . - . ID=gene-LDO38_RS14640;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=LDO38_RS14640;old_locus_tag=BVI2075_320305 NZ_CAJZAL010000133.1 Protein Homology CDS 302918 303655 . - 0 ID=cds-WP_011881076.1;Parent=gene-LDO38_RS14640;Dbxref=GenBank:WP_011881076.1;Name=WP_011881076.1;Ontology_term=GO:0006355,GO:0006547,GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-histidine metabolic process|0006547||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766658.1;locus_tag=LDO38_RS14640;product=histidine utilization repressor;protein_id=WP_011881076.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq pseudogene 303687 304016 . - . ID=gene-LDO38_RS14645;Name=LDO38_RS14645;end_range=304016,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS14645;old_locus_tag=BVI2075_320306;partial=true;pseudo=true NZ_CAJZAL010000133.1 Protein Homology CDS 303687 304016 . - 0 ID=cds-LDO38_RS14645;Parent=gene-LDO38_RS14645;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=304016,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766657.1;locus_tag=LDO38_RS14645;partial=true;product=cupin domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 304028 304792 . - . ID=gene-LDO38_RS14650;Name=LDO38_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14650;old_locus_tag=BVI2075_320307 NZ_CAJZAL010000133.1 Protein Homology CDS 304028 304792 . - 0 ID=cds-WP_069246400.1;Parent=gene-LDO38_RS14650;Dbxref=GenBank:WP_069246400.1;Name=WP_069246400.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659830.1;locus_tag=LDO38_RS14650;product=SDR family oxidoreductase;protein_id=WP_069246400.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 305535 306245 . + . ID=gene-LDO38_RS14655;Name=LDO38_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14655;old_locus_tag=BVI2075_320308 NZ_CAJZAL010000133.1 Protein Homology CDS 305535 306245 . + 0 ID=cds-WP_059475319.1;Parent=gene-LDO38_RS14655;Dbxref=GenBank:WP_059475319.1;Name=WP_059475319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659829.1;locus_tag=LDO38_RS14655;product=YceH family protein;protein_id=WP_059475319.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 306400 307530 . + . ID=gene-LDO38_RS14660;Name=LDO38_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14660;old_locus_tag=BVI2075_320309 NZ_CAJZAL010000133.1 Protein Homology CDS 306400 307530 . + 0 ID=cds-WP_011881071.1;Parent=gene-LDO38_RS14660;Dbxref=GenBank:WP_011881071.1;Name=WP_011881071.1;Ontology_term=GO:0009073,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548832.1;locus_tag=LDO38_RS14660;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_011881071.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 307975 308403 . + . ID=gene-LDO38_RS14670;Name=LDO38_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14670;old_locus_tag=BVI2075_320311 NZ_CAJZAL010000133.1 Protein Homology CDS 307975 308403 . + 0 ID=cds-WP_011881069.1;Parent=gene-LDO38_RS14670;Dbxref=GenBank:WP_011881069.1;Name=WP_011881069.1;Ontology_term=GO:0019684,GO:0009055;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;go_process=photosynthesis%2C light reaction|0019684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881069.1;locus_tag=LDO38_RS14670;product=PRC-barrel domain-containing protein;protein_id=WP_011881069.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 308670 310748 . + . ID=gene-LDO38_RS14675;Name=LDO38_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14675;old_locus_tag=BVI2075_320312 NZ_CAJZAL010000133.1 Protein Homology CDS 308670 310748 . + 0 ID=cds-WP_011881068.1;Parent=gene-LDO38_RS14675;Dbxref=GenBank:WP_011881068.1;Name=WP_011881068.1;Ontology_term=GO:0009267,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603803.1;locus_tag=LDO38_RS14675;product=carbon starvation CstA family protein;protein_id=WP_011881068.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 310761 310967 . + . ID=gene-LDO38_RS14680;Name=LDO38_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14680;old_locus_tag=BVI2075_320313 NZ_CAJZAL010000133.1 Protein Homology CDS 310761 310967 . + 0 ID=cds-WP_011881067.1;Parent=gene-LDO38_RS14680;Dbxref=GenBank:WP_011881067.1;Name=WP_011881067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523392.1;locus_tag=LDO38_RS14680;product=YbdD/YjiX family protein;protein_id=WP_011881067.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 311163 311783 . + . ID=gene-LDO38_RS14685;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=LDO38_RS14685;old_locus_tag=BVI2075_320314 NZ_CAJZAL010000133.1 Protein Homology CDS 311163 311783 . + 0 ID=cds-WP_011881066.1;Parent=gene-LDO38_RS14685;Dbxref=GenBank:WP_011881066.1;Name=WP_011881066.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009914721.1;locus_tag=LDO38_RS14685;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_011881066.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 311805 312236 . - . ID=gene-LDO38_RS14690;Name=LDO38_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14690;old_locus_tag=BVI2075_320315 NZ_CAJZAL010000133.1 Protein Homology CDS 311805 312236 . - 0 ID=cds-WP_011881065.1;Parent=gene-LDO38_RS14690;Dbxref=GenBank:WP_011881065.1;Name=WP_011881065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881065.1;locus_tag=LDO38_RS14690;product=nuclear transport factor 2 family protein;protein_id=WP_011881065.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 312330 312683 . - . ID=gene-LDO38_RS14695;Name=LDO38_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14695;old_locus_tag=BVI2075_320316 NZ_CAJZAL010000133.1 Protein Homology CDS 312330 312683 . - 0 ID=cds-WP_014724186.1;Parent=gene-LDO38_RS14695;Dbxref=GenBank:WP_014724186.1;Name=WP_014724186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548877.1;locus_tag=LDO38_RS14695;product=DOPA 4%2C5-dioxygenase family protein;protein_id=WP_014724186.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 313173 313550 . + . ID=gene-LDO38_RS14700;Name=LDO38_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14700;old_locus_tag=BVI2075_320318 NZ_CAJZAL010000133.1 Protein Homology CDS 313173 313550 . + 0 ID=cds-WP_011881063.1;Parent=gene-LDO38_RS14700;Dbxref=GenBank:WP_011881063.1;Name=WP_011881063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548878.1;locus_tag=LDO38_RS14700;product=hypothetical protein;protein_id=WP_011881063.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 313772 314932 . - . ID=gene-LDO38_RS14705;Name=hpnH;gbkey=Gene;gene=hpnH;gene_biotype=protein_coding;locus_tag=LDO38_RS14705;old_locus_tag=BVI2075_320319 NZ_CAJZAL010000133.1 Protein Homology CDS 313772 314932 . - 0 ID=cds-WP_011881062.1;Parent=gene-LDO38_RS14705;Dbxref=GenBank:WP_011881062.1;Name=WP_011881062.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;gene=hpnH;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602855.1;locus_tag=LDO38_RS14705;product=adenosyl-hopene transferase HpnH;protein_id=WP_011881062.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 314945 315886 . - . ID=gene-LDO38_RS14710;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=LDO38_RS14710;old_locus_tag=BVI2075_320320 NZ_CAJZAL010000133.1 Protein Homology CDS 314945 315886 . - 0 ID=cds-WP_011881061.1;Parent=gene-LDO38_RS14710;Dbxref=GenBank:WP_011881061.1;Name=WP_011881061.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894247.1;locus_tag=LDO38_RS14710;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_011881061.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq gene 316311 317498 . + . ID=gene-LDO38_RS14715;Name=LDO38_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14715;old_locus_tag=BVI2075_320323 NZ_CAJZAL010000133.1 Protein Homology CDS 316311 317498 . + 0 ID=cds-WP_011881060.1;Parent=gene-LDO38_RS14715;Dbxref=GenBank:WP_011881060.1;Name=WP_011881060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480289.1;locus_tag=LDO38_RS14715;product=glycosyltransferase;protein_id=WP_011881060.1;transl_table=11 NZ_CAJZAL010000133.1 RefSeq pseudogene 317617 317937 . - . ID=gene-LDO38_RS14720;Name=LDO38_RS14720;end_range=317937,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS14720;old_locus_tag=BVI2075_320324;partial=true;pseudo=true NZ_CAJZAL010000133.1 Protein Homology CDS 317617 317937 . - 0 ID=cds-LDO38_RS14720;Parent=gene-LDO38_RS14720;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=317937,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339215.1;locus_tag=LDO38_RS14720;partial=true;product=phage tail protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000134.1 1 38922 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000134.1 RefSeq region 1 38922 . + . ID=NZ_CAJZAL010000134.1:1..38922;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_33 NZ_CAJZAL010000134.1 RefSeq gene 1 1530 . + . ID=gene-LDO38_RS14725;Name=LDO38_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14725;partial=true;start_range=.,1 NZ_CAJZAL010000134.1 Protein Homology CDS 1 1530 . + 0 ID=cds-WP_224056488.1;Parent=gene-LDO38_RS14725;Dbxref=GenBank:WP_224056488.1;Name=WP_224056488.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0016866;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,intramolecular transferase activity|0016866||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723221.1;locus_tag=LDO38_RS14725;partial=true;product=pseudouridine synthase;protein_id=WP_224056488.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 1621 2154 . - . ID=gene-LDO38_RS14730;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=LDO38_RS14730;old_locus_tag=BVI2075_330002 NZ_CAJZAL010000134.1 Protein Homology CDS 1621 2154 . - 0 ID=cds-WP_011885149.1;Parent=gene-LDO38_RS14730;Dbxref=GenBank:WP_011885149.1;Name=WP_011885149.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890431.1;locus_tag=LDO38_RS14730;product=peptide deformylase;protein_id=WP_011885149.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 2151 4226 . - . ID=gene-LDO38_RS14735;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=LDO38_RS14735;old_locus_tag=BVI2075_330003 NZ_CAJZAL010000134.1 Protein Homology CDS 2151 4226 . - 0 ID=cds-WP_059474486.1;Parent=gene-LDO38_RS14735;Dbxref=GenBank:WP_059474486.1;Name=WP_059474486.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213133.1;locus_tag=LDO38_RS14735;product=NAD-dependent DNA ligase LigA;protein_id=WP_059474486.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 4387 5691 . - . ID=gene-LDO38_RS14740;Name=LDO38_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14740;old_locus_tag=BVI2075_330004 NZ_CAJZAL010000134.1 Protein Homology CDS 4387 5691 . - 0 ID=cds-WP_014723224.1;Parent=gene-LDO38_RS14740;Dbxref=GenBank:WP_014723224.1;Name=WP_014723224.1;Ontology_term=GO:0090529;gbkey=CDS;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755126.1;locus_tag=LDO38_RS14740;product=cell division protein ZipA C-terminal FtsZ-binding domain-containing protein;protein_id=WP_014723224.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 5777 9289 . - . ID=gene-LDO38_RS14745;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=LDO38_RS14745;old_locus_tag=BVI2075_330005 NZ_CAJZAL010000134.1 Protein Homology CDS 5777 9289 . - 0 ID=cds-WP_059740996.1;Parent=gene-LDO38_RS14745;Dbxref=GenBank:WP_059740996.1;Name=WP_059740996.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527298.1;locus_tag=LDO38_RS14745;product=chromosome segregation protein SMC;protein_id=WP_059740996.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 9431 10372 . - . ID=gene-LDO38_RS14750;Name=LDO38_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14750;old_locus_tag=BVI2075_330006 NZ_CAJZAL010000134.1 Protein Homology CDS 9431 10372 . - 0 ID=cds-WP_011885153.1;Parent=gene-LDO38_RS14750;Dbxref=GenBank:WP_011885153.1;Name=WP_011885153.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364141.1;locus_tag=LDO38_RS14750;product=DMT family transporter;protein_id=WP_011885153.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 10532 11764 . + . ID=gene-LDO38_RS14755;Name=dapC;gbkey=Gene;gene=dapC;gene_biotype=protein_coding;locus_tag=LDO38_RS14755;old_locus_tag=BVI2075_330007 NZ_CAJZAL010000134.1 Protein Homology CDS 10532 11764 . + 0 ID=cds-WP_041493847.1;Parent=gene-LDO38_RS14755;Dbxref=GenBank:WP_041493847.1;Name=WP_041493847.1;Ontology_term=GO:0009089,GO:0009016;gbkey=CDS;gene=dapC;go_function=succinyldiaminopimelate transaminase activity|0009016||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402636.1;locus_tag=LDO38_RS14755;product=succinyldiaminopimelate transaminase;protein_id=WP_041493847.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 11810 12637 . + . ID=gene-LDO38_RS14760;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=LDO38_RS14760;old_locus_tag=BVI2075_330009 NZ_CAJZAL010000134.1 Protein Homology CDS 11810 12637 . + 0 ID=cds-WP_006478479.1;Parent=gene-LDO38_RS14760;Dbxref=GenBank:WP_006478479.1;Name=WP_006478479.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007580558.1;locus_tag=LDO38_RS14760;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_006478479.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 12637 13005 . + . ID=gene-LDO38_RS14765;Name=LDO38_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14765;old_locus_tag=BVI2075_330008 NZ_CAJZAL010000134.1 Protein Homology CDS 12637 13005 . + 0 ID=cds-WP_011885155.1;Parent=gene-LDO38_RS14765;Dbxref=GenBank:WP_011885155.1;Name=WP_011885155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885155.1;locus_tag=LDO38_RS14765;product=ArsC family reductase;protein_id=WP_011885155.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 13096 14235 . + . ID=gene-LDO38_RS14770;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=LDO38_RS14770;old_locus_tag=BVI2075_330010 NZ_CAJZAL010000134.1 Protein Homology CDS 13096 14235 . + 0 ID=cds-WP_124259627.1;Parent=gene-LDO38_RS14770;Dbxref=GenBank:WP_124259627.1;Name=WP_124259627.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493370.1;locus_tag=LDO38_RS14770;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_124259627.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 14247 15155 . + . ID=gene-LDO38_RS14775;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=LDO38_RS14775;old_locus_tag=BVI2075_330011 NZ_CAJZAL010000134.1 Protein Homology CDS 14247 15155 . + 0 ID=cds-WP_034195306.1;Parent=gene-LDO38_RS14775;Dbxref=GenBank:WP_034195306.1;Name=WP_034195306.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764011.1;locus_tag=LDO38_RS14775;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_034195306.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 15276 16727 . + . ID=gene-LDO38_RS14780;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=LDO38_RS14780;old_locus_tag=BVI2075_330012 NZ_CAJZAL010000134.1 Protein Homology CDS 15276 16727 . + 0 ID=cds-WP_014723230.1;Parent=gene-LDO38_RS14780;Dbxref=GenBank:WP_014723230.1;Name=WP_014723230.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885158.1;locus_tag=LDO38_RS14780;product=cardiolipin synthase;protein_id=WP_014723230.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 16827 17306 . - . ID=gene-LDO38_RS14785;Name=LDO38_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14785;old_locus_tag=BVI2075_330013 NZ_CAJZAL010000134.1 Protein Homology CDS 16827 17306 . - 0 ID=cds-WP_011885159.1;Parent=gene-LDO38_RS14785;Dbxref=GenBank:WP_011885159.1;Name=WP_011885159.1;Ontology_term=GO:0004602,GO:0043295;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA,glutathione binding|0043295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904829.1;locus_tag=LDO38_RS14785;product=glutathione peroxidase;protein_id=WP_011885159.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 17443 19371 . + . ID=gene-LDO38_RS14790;Name=LDO38_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14790;old_locus_tag=BVI2075_330014 NZ_CAJZAL010000134.1 Protein Homology CDS 17443 19371 . + 0 ID=cds-WP_124259626.1;Parent=gene-LDO38_RS14790;Dbxref=GenBank:WP_124259626.1;Name=WP_124259626.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759629.1;locus_tag=LDO38_RS14790;product=ATP-binding cassette domain-containing protein;protein_id=WP_124259626.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 19578 19844 . - . ID=gene-LDO38_RS14795;Name=LDO38_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14795;old_locus_tag=BVI2075_330015 NZ_CAJZAL010000134.1 Protein Homology CDS 19578 19844 . - 0 ID=cds-WP_011885161.1;Parent=gene-LDO38_RS14795;Dbxref=GenBank:WP_011885161.1;Name=WP_011885161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759630.1;locus_tag=LDO38_RS14795;product=DUF2866 domain-containing protein;protein_id=WP_011885161.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 19983 21359 . - . ID=gene-LDO38_RS14800;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=LDO38_RS14800;old_locus_tag=BVI2075_330016 NZ_CAJZAL010000134.1 Protein Homology CDS 19983 21359 . - 0 ID=cds-WP_011885162.1;Parent=gene-LDO38_RS14800;Dbxref=GenBank:WP_011885162.1;Name=WP_011885162.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026043.1;locus_tag=LDO38_RS14800;product=DNA repair protein RadA;protein_id=WP_011885162.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 21371 22441 . - . ID=gene-LDO38_RS14805;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=LDO38_RS14805;old_locus_tag=BVI2075_330017 NZ_CAJZAL010000134.1 Protein Homology CDS 21371 22441 . - 0 ID=cds-WP_011885163.1;Parent=gene-LDO38_RS14805;Dbxref=GenBank:WP_011885163.1;Name=WP_011885163.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331722.1;locus_tag=LDO38_RS14805;product=alanine racemase;protein_id=WP_011885163.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 22660 23967 . + . ID=gene-LDO38_RS14810;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=LDO38_RS14810;old_locus_tag=BVI2075_330018 NZ_CAJZAL010000134.1 Protein Homology CDS 22660 23967 . + 0 ID=cds-WP_045578976.1;Parent=gene-LDO38_RS14810;Dbxref=GenBank:WP_045578976.1;Name=WP_045578976.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885164.1;locus_tag=LDO38_RS14810;product=lysophospholipid transporter LplT;protein_id=WP_045578976.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 24035 24844 . + . ID=gene-LDO38_RS14815;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=LDO38_RS14815;old_locus_tag=BVI2075_330019 NZ_CAJZAL010000134.1 Protein Homology CDS 24035 24844 . + 0 ID=cds-WP_046422728.1;Parent=gene-LDO38_RS14815;Dbxref=GenBank:WP_046422728.1;Name=WP_046422728.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092038.1;locus_tag=LDO38_RS14815;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_046422728.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 24863 25822 . - . ID=gene-LDO38_RS14820;Name=LDO38_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14820;old_locus_tag=BVI2075_330020 NZ_CAJZAL010000134.1 Protein Homology CDS 24863 25822 . - 0 ID=cds-WP_011885166.1;Parent=gene-LDO38_RS14820;Dbxref=GenBank:WP_011885166.1;Name=WP_011885166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885166.1;locus_tag=LDO38_RS14820;product=DUF1853 family protein;protein_id=WP_011885166.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 25819 26877 . - . ID=gene-LDO38_RS14825;Name=LDO38_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14825;old_locus_tag=BVI2075_330021 NZ_CAJZAL010000134.1 Protein Homology CDS 25819 26877 . - 0 ID=cds-WP_124259625.1;Parent=gene-LDO38_RS14825;Dbxref=GenBank:WP_124259625.1;Name=WP_124259625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492692.1;locus_tag=LDO38_RS14825;product=uracil-DNA glycosylase;protein_id=WP_124259625.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 26864 27364 . - . ID=gene-LDO38_RS14830;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=LDO38_RS14830;old_locus_tag=BVI2075_330022 NZ_CAJZAL010000134.1 Protein Homology CDS 26864 27364 . - 0 ID=cds-WP_011885168.1;Parent=gene-LDO38_RS14830;Dbxref=GenBank:WP_011885168.1;Name=WP_011885168.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=protein-N-terminal-alanine acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364154.1;locus_tag=LDO38_RS14830;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_011885168.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 27361 28128 . - . ID=gene-LDO38_RS14835;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=LDO38_RS14835;old_locus_tag=BVI2075_330023 NZ_CAJZAL010000134.1 Protein Homology CDS 27361 28128 . - 0 ID=cds-WP_124259624.1;Parent=gene-LDO38_RS14835;Dbxref=GenBank:WP_124259624.1;Name=WP_124259624.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885169.1;locus_tag=LDO38_RS14835;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_124259624.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 28289 28558 . + . ID=gene-LDO38_RS14840;Name=LDO38_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14840;old_locus_tag=BVI2075_330024 NZ_CAJZAL010000134.1 Protein Homology CDS 28289 28558 . + 0 ID=cds-WP_011885170.1;Parent=gene-LDO38_RS14840;Dbxref=GenBank:WP_011885170.1;Name=WP_011885170.1;Ontology_term=GO:0000062;gbkey=CDS;go_function=fatty-acyl-CoA binding|0000062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763999.1;locus_tag=LDO38_RS14840;product=acyl-CoA-binding protein;protein_id=WP_011885170.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 28918 30468 . + . ID=gene-LDO38_RS14845;Name=LDO38_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14845;old_locus_tag=BVI2075_330025 NZ_CAJZAL010000134.1 Protein Homology CDS 28918 30468 . + 0 ID=cds-WP_124259623.1;Parent=gene-LDO38_RS14845;Dbxref=GenBank:WP_124259623.1;Name=WP_124259623.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491421.1;locus_tag=LDO38_RS14845;product=DEAD/DEAH box helicase;protein_id=WP_124259623.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 30838 32145 . + . ID=gene-LDO38_RS14850;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=LDO38_RS14850;old_locus_tag=BVI2075_330027 NZ_CAJZAL010000134.1 Protein Homology CDS 30838 32145 . + 0 ID=cds-WP_014723240.1;Parent=gene-LDO38_RS14850;Dbxref=GenBank:WP_014723240.1;Name=WP_014723240.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009931004.1;locus_tag=LDO38_RS14850;product=isocitrate lyase;protein_id=WP_014723240.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 32332 32766 . - . ID=gene-LDO38_RS14855;Name=LDO38_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14855;old_locus_tag=BVI2075_330028 NZ_CAJZAL010000134.1 Protein Homology CDS 32332 32766 . - 0 ID=cds-WP_011885173.1;Parent=gene-LDO38_RS14855;Dbxref=GenBank:WP_011885173.1;Name=WP_011885173.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007580518.1;locus_tag=LDO38_RS14855;product=universal stress protein;protein_id=WP_011885173.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 32941 33846 . - . ID=gene-LDO38_RS14860;Name=LDO38_RS14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14860;old_locus_tag=BVI2075_330029 NZ_CAJZAL010000134.1 Protein Homology CDS 32941 33846 . - 0 ID=cds-WP_059461320.1;Parent=gene-LDO38_RS14860;Dbxref=GenBank:WP_059461320.1;Name=WP_059461320.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885174.1;locus_tag=LDO38_RS14860;product=LysR family transcriptional regulator;protein_id=WP_059461320.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 34004 34765 . + . ID=gene-LDO38_RS14865;Name=LDO38_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14865;old_locus_tag=BVI2075_330030 NZ_CAJZAL010000134.1 Protein Homology CDS 34004 34765 . + 0 ID=cds-WP_059457050.1;Parent=gene-LDO38_RS14865;Dbxref=GenBank:WP_059457050.1;Name=WP_059457050.1;Ontology_term=GO:0019120;gbkey=CDS;go_function=hydrolase activity%2C acting on acid halide bonds%2C in C-halide compounds|0019120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213122.1;locus_tag=LDO38_RS14865;product=haloacid dehalogenase type II;protein_id=WP_059457050.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 34833 36425 . + . ID=gene-LDO38_RS14870;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=LDO38_RS14870;old_locus_tag=BVI2075_330032 NZ_CAJZAL010000134.1 Protein Homology CDS 34833 36425 . + 0 ID=cds-WP_059461323.1;Parent=gene-LDO38_RS14870;Dbxref=GenBank:WP_059461323.1;Name=WP_059461323.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026029.1;locus_tag=LDO38_RS14870;product=malate synthase A;protein_id=WP_059461323.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 36572 36985 . - . ID=gene-LDO38_RS14875;Name=LDO38_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14875;old_locus_tag=BVI2075_330033 NZ_CAJZAL010000134.1 Protein Homology CDS 36572 36985 . - 0 ID=cds-WP_011885177.1;Parent=gene-LDO38_RS14875;Dbxref=GenBank:WP_011885177.1;Name=WP_011885177.1;Ontology_term=GO:0061929;gbkey=CDS;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657314.1;locus_tag=LDO38_RS14875;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_011885177.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 37176 38069 . + . ID=gene-LDO38_RS14880;Name=LDO38_RS14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14880;old_locus_tag=BVI2075_330034 NZ_CAJZAL010000134.1 Protein Homology CDS 37176 38069 . + 0 ID=cds-WP_011885178.1;Parent=gene-LDO38_RS14880;Dbxref=GenBank:WP_011885178.1;Name=WP_011885178.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885178.1;locus_tag=LDO38_RS14880;product=AraC family transcriptional regulator;protein_id=WP_011885178.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 38097 38561 . - . ID=gene-LDO38_RS14885;Name=LDO38_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14885;old_locus_tag=BVI2075_330035 NZ_CAJZAL010000134.1 Protein Homology CDS 38097 38561 . - 0 ID=cds-WP_011885179.1;Parent=gene-LDO38_RS14885;Dbxref=GenBank:WP_011885179.1;Name=WP_011885179.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402608.1;locus_tag=LDO38_RS14885;product=GNAT family N-acetyltransferase;protein_id=WP_011885179.1;transl_table=11 NZ_CAJZAL010000134.1 RefSeq gene 38686 38922 . + . ID=gene-LDO38_RS14890;Name=LDO38_RS14890;end_range=38922,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14890;partial=true NZ_CAJZAL010000134.1 GeneMarkS-2+ CDS 38686 38922 . + 0 ID=cds-WP_224056489.1;Parent=gene-LDO38_RS14890;Dbxref=GenBank:WP_224056489.1;Name=WP_224056489.1;end_range=38922,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS14890;partial=true;product=hypothetical protein;protein_id=WP_224056489.1;transl_table=11 ##sequence-region NZ_CAJZAL010000135.1 1 59698 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000135.1 RefSeq region 1 59698 . + . ID=NZ_CAJZAL010000135.1:1..59698;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_34 NZ_CAJZAL010000135.1 RefSeq gene 1 1778 . - . ID=gene-LDO38_RS14895;Name=LDO38_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14895;partial=true;start_range=.,1 NZ_CAJZAL010000135.1 Protein Homology CDS 1 1778 . - 0 ID=cds-WP_224056490.1;Parent=gene-LDO38_RS14895;Dbxref=GenBank:WP_224056490.1;Name=WP_224056490.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726109.1;locus_tag=LDO38_RS14895;partial=true;product=ATP-binding protein;protein_id=WP_224056490.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 2185 3105 . + . ID=gene-LDO38_RS14900;Name=LDO38_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14900;old_locus_tag=BVI2075_340003 NZ_CAJZAL010000135.1 Protein Homology CDS 2185 3105 . + 0 ID=cds-WP_011880448.1;Parent=gene-LDO38_RS14900;Dbxref=GenBank:WP_011880448.1;Name=WP_011880448.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498483.1;locus_tag=LDO38_RS14900;product=helix-turn-helix domain-containing protein;protein_id=WP_011880448.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 3407 4312 . + . ID=gene-LDO38_RS14905;Name=LDO38_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14905;old_locus_tag=BVI2075_340005 NZ_CAJZAL010000135.1 Protein Homology CDS 3407 4312 . + 0 ID=cds-WP_014726112.1;Parent=gene-LDO38_RS14905;Dbxref=GenBank:WP_014726112.1;Name=WP_014726112.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726112.1;locus_tag=LDO38_RS14905;product=LysR family transcriptional regulator;protein_id=WP_014726112.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 4347 5831 . - . ID=gene-LDO38_RS14910;Name=LDO38_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14910;old_locus_tag=BVI2075_340006 NZ_CAJZAL010000135.1 Protein Homology CDS 4347 5831 . - 0 ID=cds-WP_041494394.1;Parent=gene-LDO38_RS14910;Dbxref=GenBank:WP_041494394.1;Name=WP_041494394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337468.1;locus_tag=LDO38_RS14910;product=alginate export family protein;protein_id=WP_041494394.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 5846 6799 . - . ID=gene-LDO38_RS14915;Name=LDO38_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14915;old_locus_tag=BVI2075_340007 NZ_CAJZAL010000135.1 Protein Homology CDS 5846 6799 . - 0 ID=cds-WP_011880451.1;Parent=gene-LDO38_RS14915;Dbxref=GenBank:WP_011880451.1;Name=WP_011880451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337467.1;locus_tag=LDO38_RS14915;product=lactoylglutathione lyase;protein_id=WP_011880451.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 6855 7592 . - . ID=gene-LDO38_RS14920;Name=LDO38_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14920;old_locus_tag=BVI2075_340008 NZ_CAJZAL010000135.1 Protein Homology CDS 6855 7592 . - 0 ID=cds-WP_059463247.1;Parent=gene-LDO38_RS14920;Dbxref=GenBank:WP_059463247.1;Name=WP_059463247.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726114.1;locus_tag=LDO38_RS14920;product=YoaK family protein;protein_id=WP_059463247.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 7574 7780 . - . ID=gene-LDO38_RS14925;Name=LDO38_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14925;old_locus_tag=BVI2075_340009 NZ_CAJZAL010000135.1 Protein Homology CDS 7574 7780 . - 0 ID=cds-WP_176300105.1;Parent=gene-LDO38_RS14925;Dbxref=GenBank:WP_176300105.1;Name=WP_176300105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726115.1;locus_tag=LDO38_RS14925;product=hypothetical protein;protein_id=WP_176300105.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 7973 8722 . + . ID=gene-LDO38_RS14930;Name=LDO38_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14930;old_locus_tag=BVI2075_340010 NZ_CAJZAL010000135.1 Protein Homology CDS 7973 8722 . + 0 ID=cds-WP_011880454.1;Parent=gene-LDO38_RS14930;Dbxref=GenBank:WP_011880454.1;Name=WP_011880454.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726116.1;locus_tag=LDO38_RS14930;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011880454.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 8868 10010 . + . ID=gene-LDO38_RS14935;Name=LDO38_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14935;old_locus_tag=BVI2075_340011 NZ_CAJZAL010000135.1 Protein Homology CDS 8868 10010 . + 0 ID=cds-WP_224056491.1;Parent=gene-LDO38_RS14935;Dbxref=GenBank:WP_224056491.1;Name=WP_224056491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337459.1;locus_tag=LDO38_RS14935;product=FAD binding domain-containing protein;protein_id=WP_224056491.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 9938 10243 . - . ID=gene-LDO38_RS14940;Name=LDO38_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14940;old_locus_tag=BVI2075_340012 NZ_CAJZAL010000135.1 Protein Homology CDS 9938 10243 . - 0 ID=cds-WP_224056492.1;Parent=gene-LDO38_RS14940;Dbxref=GenBank:WP_224056492.1;Name=WP_224056492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493778.1;locus_tag=LDO38_RS14940;product=hypothetical protein;protein_id=WP_224056492.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 10240 10521 . - . ID=gene-LDO38_RS14945;Name=LDO38_RS14945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14945;old_locus_tag=BVI2075_340013 NZ_CAJZAL010000135.1 Protein Homology CDS 10240 10521 . - 0 ID=cds-WP_011880456.1;Parent=gene-LDO38_RS14945;Dbxref=GenBank:WP_011880456.1;Name=WP_011880456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880456.1;locus_tag=LDO38_RS14945;product=DUF4148 domain-containing protein;protein_id=WP_011880456.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 10793 14050 . + . ID=gene-LDO38_RS14950;Name=LDO38_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14950;old_locus_tag=BVI2075_340014 NZ_CAJZAL010000135.1 Protein Homology CDS 10793 14050 . + 0 ID=cds-WP_224056493.1;Parent=gene-LDO38_RS14950;Dbxref=GenBank:WP_224056493.1;Name=WP_224056493.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545696.1;locus_tag=LDO38_RS14950;product=efflux RND transporter permease subunit;protein_id=WP_224056493.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 14103 15581 . + . ID=gene-LDO38_RS14955;Name=LDO38_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14955;old_locus_tag=BVI2075_340015 NZ_CAJZAL010000135.1 Protein Homology CDS 14103 15581 . + 0 ID=cds-WP_224056494.1;Parent=gene-LDO38_RS14955;Dbxref=GenBank:WP_224056494.1;Name=WP_224056494.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726120.1;locus_tag=LDO38_RS14955;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_224056494.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 15613 17154 . + . ID=gene-LDO38_RS14960;Name=LDO38_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14960;old_locus_tag=BVI2075_340016 NZ_CAJZAL010000135.1 Protein Homology CDS 15613 17154 . + 0 ID=cds-WP_224056495.1;Parent=gene-LDO38_RS14960;Dbxref=GenBank:WP_224056495.1;Name=WP_224056495.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726121.1;locus_tag=LDO38_RS14960;product=efflux transporter outer membrane subunit;protein_id=WP_224056495.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 17132 18592 . - . ID=gene-LDO38_RS14965;Name=LDO38_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14965;old_locus_tag=BVI2075_340017 NZ_CAJZAL010000135.1 Protein Homology CDS 17132 18592 . - 0 ID=cds-WP_175983634.1;Parent=gene-LDO38_RS14965;Dbxref=GenBank:WP_175983634.1;Name=WP_175983634.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726122.1;locus_tag=LDO38_RS14965;product=heavy metal sensor histidine kinase;protein_id=WP_175983634.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 18589 19266 . - . ID=gene-LDO38_RS14970;Name=LDO38_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14970;old_locus_tag=BVI2075_340018 NZ_CAJZAL010000135.1 Protein Homology CDS 18589 19266 . - 0 ID=cds-WP_011880461.1;Parent=gene-LDO38_RS14970;Dbxref=GenBank:WP_011880461.1;Name=WP_011880461.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411957.1;locus_tag=LDO38_RS14970;product=heavy metal response regulator transcription factor;protein_id=WP_011880461.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 19507 20409 . - . ID=gene-LDO38_RS14975;Name=LDO38_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14975;old_locus_tag=BVI2075_340019 NZ_CAJZAL010000135.1 Protein Homology CDS 19507 20409 . - 0 ID=cds-WP_014726124.1;Parent=gene-LDO38_RS14975;Dbxref=GenBank:WP_014726124.1;Name=WP_014726124.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749711.1;locus_tag=LDO38_RS14975;product=GNAT family N-acetyltransferase;protein_id=WP_014726124.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 20603 21829 . - . ID=gene-LDO38_RS14980;Name=LDO38_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14980;old_locus_tag=BVI2075_340020 NZ_CAJZAL010000135.1 Protein Homology CDS 20603 21829 . - 0 ID=cds-WP_404842319.1;Parent=gene-LDO38_RS14980;Dbxref=GenBank:WP_404842319.1;Name=WP_404842319.1;Ontology_term=GO:0016787,GO:0016810;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726126.1;locus_tag=LDO38_RS14980;product=M20 aminoacylase family protein;protein_id=WP_404842319.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 21859 23328 . - . ID=gene-LDO38_RS14985;Name=LDO38_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14985;old_locus_tag=BVI2075_340021 NZ_CAJZAL010000135.1 Protein Homology CDS 21859 23328 . - 0 ID=cds-WP_176300103.1;Parent=gene-LDO38_RS14985;Dbxref=GenBank:WP_176300103.1;Name=WP_176300103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661234.1;locus_tag=LDO38_RS14985;product=aldehyde dehydrogenase family protein;protein_id=WP_176300103.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 23325 24602 . - . ID=gene-LDO38_RS14990;Name=LDO38_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14990;old_locus_tag=BVI2075_340022 NZ_CAJZAL010000135.1 Protein Homology CDS 23325 24602 . - 0 ID=cds-WP_034193672.1;Parent=gene-LDO38_RS14990;Dbxref=GenBank:WP_034193672.1;Name=WP_034193672.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012427751.1;locus_tag=LDO38_RS14990;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_034193672.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 24745 26070 . - . ID=gene-LDO38_RS14995;Name=LDO38_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS14995;old_locus_tag=BVI2075_340023 NZ_CAJZAL010000135.1 Protein Homology CDS 24745 26070 . - 0 ID=cds-WP_011880466.1;Parent=gene-LDO38_RS14995;Dbxref=GenBank:WP_011880466.1;Name=WP_011880466.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661232.1;locus_tag=LDO38_RS14995;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_011880466.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 26073 26807 . - . ID=gene-LDO38_RS15000;Name=LDO38_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15000;old_locus_tag=BVI2075_340024 NZ_CAJZAL010000135.1 Protein Homology CDS 26073 26807 . - 0 ID=cds-WP_011880467.1;Parent=gene-LDO38_RS15000;Dbxref=GenBank:WP_011880467.1;Name=WP_011880467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758405.1;locus_tag=LDO38_RS15000;product=cupin domain-containing protein;protein_id=WP_011880467.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 27040 27507 . - . ID=gene-LDO38_RS15005;Name=LDO38_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15005;old_locus_tag=BVI2075_340025 NZ_CAJZAL010000135.1 Protein Homology CDS 27040 27507 . - 0 ID=cds-WP_224056496.1;Parent=gene-LDO38_RS15005;Dbxref=GenBank:WP_224056496.1;Name=WP_224056496.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726131.1;locus_tag=LDO38_RS15005;product=helix-turn-helix domain-containing protein;protein_id=WP_224056496.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 27590 28867 . - . ID=gene-LDO38_RS15010;Name=LDO38_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15010;old_locus_tag=BVI2075_340026 NZ_CAJZAL010000135.1 Protein Homology CDS 27590 28867 . - 0 ID=cds-WP_011880469.1;Parent=gene-LDO38_RS15010;Dbxref=GenBank:WP_011880469.1;Name=WP_011880469.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372397.1;locus_tag=LDO38_RS15010;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_011880469.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 29080 30954 . - . ID=gene-LDO38_RS15015;Name=LDO38_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15015;old_locus_tag=BVI2075_340027 NZ_CAJZAL010000135.1 Protein Homology CDS 29080 30954 . - 0 ID=cds-WP_212173020.1;Parent=gene-LDO38_RS15015;Dbxref=GenBank:WP_212173020.1;Name=WP_212173020.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880470.1;locus_tag=LDO38_RS15015;product=ABC transporter ATP-binding protein;protein_id=WP_212173020.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 30954 31910 . - . ID=gene-LDO38_RS15020;Name=LDO38_RS15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15020;old_locus_tag=BVI2075_340028 NZ_CAJZAL010000135.1 Protein Homology CDS 30954 31910 . - 0 ID=cds-WP_014726135.1;Parent=gene-LDO38_RS15020;Dbxref=GenBank:WP_014726135.1;Name=WP_014726135.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726135.1;locus_tag=LDO38_RS15020;product=ABC transporter permease;protein_id=WP_014726135.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 31940 32893 . - . ID=gene-LDO38_RS15025;Name=LDO38_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15025;old_locus_tag=BVI2075_340029 NZ_CAJZAL010000135.1 Protein Homology CDS 31940 32893 . - 0 ID=cds-WP_011880472.1;Parent=gene-LDO38_RS15025;Dbxref=GenBank:WP_011880472.1;Name=WP_011880472.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335753.1;locus_tag=LDO38_RS15025;product=ABC transporter permease;protein_id=WP_011880472.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 32973 34559 . - . ID=gene-LDO38_RS15030;Name=LDO38_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15030;old_locus_tag=BVI2075_340030 NZ_CAJZAL010000135.1 Protein Homology CDS 32973 34559 . - 0 ID=cds-WP_014726136.1;Parent=gene-LDO38_RS15030;Dbxref=GenBank:WP_014726136.1;Name=WP_014726136.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661225.1;locus_tag=LDO38_RS15030;product=ABC transporter substrate-binding protein;protein_id=WP_014726136.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq pseudogene 35094 35440 . + . ID=gene-LDO38_RS15035;Name=LDO38_RS15035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS15035;old_locus_tag=BVI2075_340032;partial=true;pseudo=true;start_range=.,35094 NZ_CAJZAL010000135.1 Protein Homology CDS 35094 35440 . + 0 ID=cds-LDO38_RS15035;Parent=gene-LDO38_RS15035;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013591152.1;locus_tag=LDO38_RS15035;partial=true;product=PLP-dependent aminotransferase family protein;pseudo=true;start_range=.,35094;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 35551 37443 . - . ID=gene-LDO38_RS15040;Name=LDO38_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15040;old_locus_tag=BVI2075_340033 NZ_CAJZAL010000135.1 Protein Homology CDS 35551 37443 . - 0 ID=cds-WP_059621939.1;Parent=gene-LDO38_RS15040;Dbxref=GenBank:WP_059621939.1;Name=WP_059621939.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880478.1;locus_tag=LDO38_RS15040;product=methyl-accepting chemotaxis protein;protein_id=WP_059621939.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 38022 39557 . - . ID=gene-LDO38_RS15045;Name=LDO38_RS15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15045;old_locus_tag=BVI2075_340034 NZ_CAJZAL010000135.1 Protein Homology CDS 38022 39557 . - 0 ID=cds-WP_034193629.1;Parent=gene-LDO38_RS15045;Dbxref=GenBank:WP_034193629.1;Name=WP_034193629.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014972409.1;locus_tag=LDO38_RS15045;product=methyl-accepting chemotaxis protein;protein_id=WP_034193629.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 39726 40394 . - . ID=gene-LDO38_RS15050;Name=LDO38_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15050;old_locus_tag=BVI2075_340035 NZ_CAJZAL010000135.1 Protein Homology CDS 39726 40394 . - 0 ID=cds-WP_224056497.1;Parent=gene-LDO38_RS15050;Dbxref=GenBank:WP_224056497.1;Name=WP_224056497.1;Ontology_term=GO:0019120;gbkey=CDS;go_function=hydrolase activity%2C acting on acid halide bonds%2C in C-halide compounds|0019120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549842.1;locus_tag=LDO38_RS15050;product=haloacid dehalogenase type II;protein_id=WP_224056497.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 40460 40615 . - . ID=gene-LDO38_RS15055;Name=LDO38_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15055 NZ_CAJZAL010000135.1 GeneMarkS-2+ CDS 40460 40615 . - 0 ID=cds-WP_155625328.1;Parent=gene-LDO38_RS15055;Dbxref=GenBank:WP_155625328.1;Name=WP_155625328.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS15055;product=hypothetical protein;protein_id=WP_155625328.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 40827 41687 . + . ID=gene-LDO38_RS15060;Name=LDO38_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15060;old_locus_tag=BVI2075_340036 NZ_CAJZAL010000135.1 Protein Homology CDS 40827 41687 . + 0 ID=cds-WP_011880482.1;Parent=gene-LDO38_RS15060;Dbxref=GenBank:WP_011880482.1;Name=WP_011880482.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482807.1;locus_tag=LDO38_RS15060;product=GNAT family N-acetyltransferase;protein_id=WP_011880482.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 41696 42622 . + . ID=gene-LDO38_RS15065;Name=LDO38_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15065;old_locus_tag=BVI2075_340037 NZ_CAJZAL010000135.1 Protein Homology CDS 41696 42622 . + 0 ID=cds-WP_224056498.1;Parent=gene-LDO38_RS15065;Dbxref=GenBank:WP_224056498.1;Name=WP_224056498.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880483.1;locus_tag=LDO38_RS15065;product=2-hydroxyacid dehydrogenase;protein_id=WP_224056498.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 42781 44181 . + . ID=gene-LDO38_RS15070;Name=LDO38_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15070;old_locus_tag=BVI2075_340038 NZ_CAJZAL010000135.1 Protein Homology CDS 42781 44181 . + 0 ID=cds-WP_011880484.1;Parent=gene-LDO38_RS15070;Dbxref=GenBank:WP_011880484.1;Name=WP_011880484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749695.1;locus_tag=LDO38_RS15070;product=aspartate aminotransferase family protein;protein_id=WP_011880484.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 44268 44759 . + . ID=gene-LDO38_RS15075;Name=LDO38_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15075;old_locus_tag=BVI2075_340039 NZ_CAJZAL010000135.1 Protein Homology CDS 44268 44759 . + 0 ID=cds-WP_011880485.1;Parent=gene-LDO38_RS15075;Dbxref=GenBank:WP_011880485.1;Name=WP_011880485.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880485.1;locus_tag=LDO38_RS15075;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011880485.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 44866 46338 . + . ID=gene-LDO38_RS15080;Name=LDO38_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15080;old_locus_tag=BVI2075_340040 NZ_CAJZAL010000135.1 Protein Homology CDS 44866 46338 . + 0 ID=cds-WP_034193630.1;Parent=gene-LDO38_RS15080;Dbxref=GenBank:WP_034193630.1;Name=WP_034193630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100339.1;locus_tag=LDO38_RS15080;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_034193630.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 46557 48077 . + . ID=gene-LDO38_RS15085;Name=LDO38_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15085;old_locus_tag=BVI2075_340041 NZ_CAJZAL010000135.1 Protein Homology CDS 46557 48077 . + 0 ID=cds-WP_059605106.1;Parent=gene-LDO38_RS15085;Dbxref=GenBank:WP_059605106.1;Name=WP_059605106.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749692.1;locus_tag=LDO38_RS15085;product=GGDEF domain-containing protein;protein_id=WP_059605106.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 48208 49794 . + . ID=gene-LDO38_RS15090;Name=LDO38_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15090;old_locus_tag=BVI2075_340042 NZ_CAJZAL010000135.1 Protein Homology CDS 48208 49794 . + 0 ID=cds-WP_224056499.1;Parent=gene-LDO38_RS15090;Dbxref=GenBank:WP_224056499.1;Name=WP_224056499.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880488.1;locus_tag=LDO38_RS15090;product=methyl-accepting chemotaxis protein;protein_id=WP_224056499.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 49958 51916 . + . ID=gene-LDO38_RS15095;Name=LDO38_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15095;old_locus_tag=BVI2075_340043 NZ_CAJZAL010000135.1 Protein Homology CDS 49958 51916 . + 0 ID=cds-WP_014726146.1;Parent=gene-LDO38_RS15095;Dbxref=GenBank:WP_014726146.1;Name=WP_014726146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372385.1;locus_tag=LDO38_RS15095;product=phosphatase PAP2 family protein;protein_id=WP_014726146.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 52044 53003 . + . ID=gene-LDO38_RS15100;Name=LDO38_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15100;old_locus_tag=BVI2075_340044 NZ_CAJZAL010000135.1 Protein Homology CDS 52044 53003 . + 0 ID=cds-WP_034193633.1;Parent=gene-LDO38_RS15100;Dbxref=GenBank:WP_034193633.1;Name=WP_034193633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726147.1;locus_tag=LDO38_RS15100;product=DUF72 domain-containing protein;protein_id=WP_034193633.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 53000 53170 . + . ID=gene-LDO38_RS15105;Name=LDO38_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15105;old_locus_tag=BVI2075_340045 NZ_CAJZAL010000135.1 Protein Homology CDS 53000 53170 . + 0 ID=cds-WP_014726148.1;Parent=gene-LDO38_RS15105;Dbxref=GenBank:WP_014726148.1;Name=WP_014726148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020067818.1;locus_tag=LDO38_RS15105;product=hypothetical protein;protein_id=WP_014726148.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq pseudogene 53180 53845 . - . ID=gene-LDO38_RS15110;Name=LDO38_RS15110;end_range=53845,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS15110;old_locus_tag=BVI2075_340046;partial=true;pseudo=true NZ_CAJZAL010000135.1 Protein Homology CDS 53180 53845 . - 0 ID=cds-LDO38_RS15110;Parent=gene-LDO38_RS15110;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003700;end_range=53845,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012434984.1;locus_tag=LDO38_RS15110;partial=true;product=substrate binding domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 54239 54643 . + . ID=gene-LDO38_RS15115;Name=LDO38_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15115;old_locus_tag=BVI2075_340047 NZ_CAJZAL010000135.1 Protein Homology CDS 54239 54643 . + 0 ID=cds-WP_011880494.1;Parent=gene-LDO38_RS15115;Dbxref=GenBank:WP_011880494.1;Name=WP_011880494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880494.1;locus_tag=LDO38_RS15115;product=cupin domain-containing protein;protein_id=WP_011880494.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 54892 55767 . - . ID=gene-LDO38_RS15120;Name=LDO38_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15120;old_locus_tag=BVI2075_340048 NZ_CAJZAL010000135.1 Protein Homology CDS 54892 55767 . - 0 ID=cds-WP_034193634.1;Parent=gene-LDO38_RS15120;Dbxref=GenBank:WP_034193634.1;Name=WP_034193634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372377.1;locus_tag=LDO38_RS15120;product=aldo/keto reductase family oxidoreductase;protein_id=WP_034193634.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 55868 56770 . + . ID=gene-LDO38_RS15125;Name=LDO38_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15125;old_locus_tag=BVI2075_340049 NZ_CAJZAL010000135.1 Protein Homology CDS 55868 56770 . + 0 ID=cds-WP_059894603.1;Parent=gene-LDO38_RS15125;Dbxref=GenBank:WP_059894603.1;Name=WP_059894603.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726152.1;locus_tag=LDO38_RS15125;product=LysR family transcriptional regulator;protein_id=WP_059894603.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 56834 58078 . - . ID=gene-LDO38_RS15130;Name=LDO38_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15130;old_locus_tag=BVI2075_340050 NZ_CAJZAL010000135.1 Protein Homology CDS 56834 58078 . - 0 ID=cds-WP_224056500.1;Parent=gene-LDO38_RS15130;Dbxref=GenBank:WP_224056500.1;Name=WP_224056500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880497.1;locus_tag=LDO38_RS15130;product=arsenic transporter;protein_id=WP_224056500.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 58116 59005 . - . ID=gene-LDO38_RS15135;Name=LDO38_RS15135;end_range=59005,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15135;old_locus_tag=BVI2075_340051;partial=true NZ_CAJZAL010000135.1 Protein Homology CDS 58116 59005 . - 2 ID=cds-WP_435520949.1;Parent=gene-LDO38_RS15135;Dbxref=GenBank:WP_435520949.1;Name=WP_435520949.1;end_range=59005,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726154.1;locus_tag=LDO38_RS15135;partial=true;product=MFS transporter;protein_id=WP_435520949.1;transl_table=11 NZ_CAJZAL010000135.1 RefSeq gene 59016 59302 . - . ID=gene-LDO38_RS30540;Name=LDO38_RS30540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30540;old_locus_tag=BVI2075_340052;partial=true;start_range=.,59016 NZ_CAJZAL010000135.1 Protein Homology CDS 59016 59302 . - 0 ID=cds-WP_435520950.1;Parent=gene-LDO38_RS30540;Dbxref=GenBank:WP_435520950.1;Name=WP_435520950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726154.1;locus_tag=LDO38_RS30540;partial=true;product=MFS transporter;protein_id=WP_435520950.1;start_range=.,59016;transl_table=11 NZ_CAJZAL010000135.1 RefSeq pseudogene 59471 59683 . - . ID=gene-LDO38_RS30545;Name=LDO38_RS30545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30545;old_locus_tag=BVI2075_340054;partial=true;pseudo=true;start_range=.,59471 NZ_CAJZAL010000135.1 GeneMarkS-2+ CDS 59471 59683 . - 0 ID=cds-LDO38_RS30545;Parent=gene-LDO38_RS30545;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30545;partial=true;product=hypothetical protein;pseudo=true;start_range=.,59471;transl_table=11 ##sequence-region NZ_CAJZAL010000136.1 1 57721 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000136.1 RefSeq region 1 57721 . + . ID=NZ_CAJZAL010000136.1:1..57721;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_35 NZ_CAJZAL010000136.1 RefSeq gene 185 2392 . - . ID=gene-LDO38_RS15140;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=LDO38_RS15140;old_locus_tag=BVI2075_350002 NZ_CAJZAL010000136.1 Protein Homology CDS 185 2392 . - 0 ID=cds-WP_224056501.1;Parent=gene-LDO38_RS15140;Dbxref=GenBank:WP_224056501.1;Name=WP_224056501.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726202.1;locus_tag=LDO38_RS15140;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_224056501.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 2389 3168 . - . ID=gene-LDO38_RS15145;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=LDO38_RS15145;old_locus_tag=BVI2075_350003 NZ_CAJZAL010000136.1 Protein Homology CDS 2389 3168 . - 0 ID=cds-WP_041494471.1;Parent=gene-LDO38_RS15145;Dbxref=GenBank:WP_041494471.1;Name=WP_041494471.1;Ontology_term=GO:0090540;gbkey=CDS;gene=bcsQ;go_process=bacterial cellulose biosynthetic process|0090540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008924336.1;locus_tag=LDO38_RS15145;product=cellulose biosynthesis protein BcsQ;protein_id=WP_041494471.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 3165 3602 . - . ID=gene-LDO38_RS15150;Name=bcsP;gbkey=Gene;gene=bcsP;gene_biotype=protein_coding;locus_tag=LDO38_RS15150;old_locus_tag=BVI2075_350004 NZ_CAJZAL010000136.1 Protein Homology CDS 3165 3602 . - 0 ID=cds-WP_354003697.1;Parent=gene-LDO38_RS15150;Dbxref=GenBank:WP_354003697.1;Name=WP_354003697.1;gbkey=CDS;gene=bcsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880559.1;locus_tag=LDO38_RS15150;product=cellulose biosynthesis protein BcsP;protein_id=WP_354003697.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 3630 4085 . - . ID=gene-LDO38_RS15155;Name=bcsD;gbkey=Gene;gene=bcsD;gene_biotype=protein_coding;locus_tag=LDO38_RS15155;old_locus_tag=BVI2075_350005 NZ_CAJZAL010000136.1 Protein Homology CDS 3630 4085 . - 0 ID=cds-WP_041494403.1;Parent=gene-LDO38_RS15155;Dbxref=GenBank:WP_041494403.1;Name=WP_041494403.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsD;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880560.1;locus_tag=LDO38_RS15155;product=cellulose biosynthesis protein BcsD;protein_id=WP_041494403.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 4365 4598 . - . ID=gene-LDO38_RS15160;Name=LDO38_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15160;old_locus_tag=BVI2075_350006 NZ_CAJZAL010000136.1 Protein Homology CDS 4365 4598 . - 0 ID=cds-WP_011880561.1;Parent=gene-LDO38_RS15160;Dbxref=GenBank:WP_011880561.1;Name=WP_011880561.1;Ontology_term=GO:0044780,GO:0045893;gbkey=CDS;go_process=bacterial-type flagellum assembly|0044780||IEA,positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880561.1;locus_tag=LDO38_RS15160;product=flagellar transcriptional regulator FlhD;protein_id=WP_011880561.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 4806 5027 . - . ID=gene-LDO38_RS15165;Name=LDO38_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15165;old_locus_tag=BVI2075_350007 NZ_CAJZAL010000136.1 Protein Homology CDS 4806 5027 . - 0 ID=cds-WP_224056503.1;Parent=gene-LDO38_RS15165;Dbxref=GenBank:WP_224056503.1;Name=WP_224056503.1;Ontology_term=GO:0044780,GO:0045893;gbkey=CDS;go_process=bacterial-type flagellum assembly|0044780||IEA,positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726206.1;locus_tag=LDO38_RS15165;product=flagellar transcriptional regulator FlhD;protein_id=WP_224056503.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 5379 6263 . + . ID=gene-LDO38_RS15170;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=LDO38_RS15170;old_locus_tag=BVI2075_350008 NZ_CAJZAL010000136.1 Protein Homology CDS 5379 6263 . + 0 ID=cds-WP_011880563.1;Parent=gene-LDO38_RS15170;Dbxref=GenBank:WP_011880563.1;Name=WP_011880563.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880563.1;locus_tag=LDO38_RS15170;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_011880563.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 6359 6940 . + . ID=gene-LDO38_RS15175;Name=LDO38_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15175;old_locus_tag=BVI2075_350009 NZ_CAJZAL010000136.1 Protein Homology CDS 6359 6940 . + 0 ID=cds-WP_014726208.1;Parent=gene-LDO38_RS15175;Dbxref=GenBank:WP_014726208.1;Name=WP_014726208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880564.1;locus_tag=LDO38_RS15175;product=phosphatase PAP2 family protein;protein_id=WP_014726208.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 7130 8395 . + . ID=gene-LDO38_RS15180;Name=LDO38_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15180;old_locus_tag=BVI2075_350010 NZ_CAJZAL010000136.1 Protein Homology CDS 7130 8395 . + 0 ID=cds-WP_059461001.1;Parent=gene-LDO38_RS15180;Dbxref=GenBank:WP_059461001.1;Name=WP_059461001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880565.1;locus_tag=LDO38_RS15180;product=glycosyltransferase WbuB;protein_id=WP_059461001.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 8427 9836 . + . ID=gene-LDO38_RS15185;Name=LDO38_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15185;old_locus_tag=BVI2075_350011 NZ_CAJZAL010000136.1 Protein Homology CDS 8427 9836 . + 0 ID=cds-WP_175949596.1;Parent=gene-LDO38_RS15185;Dbxref=GenBank:WP_175949596.1;Name=WP_175949596.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880566.1;locus_tag=LDO38_RS15185;product=UDP-glucose dehydrogenase family protein;protein_id=WP_175949596.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 10092 11246 . + . ID=gene-LDO38_RS15190;Name=LDO38_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15190;old_locus_tag=BVI2075_350012 NZ_CAJZAL010000136.1 Protein Homology CDS 10092 11246 . + 0 ID=cds-WP_081064982.1;Parent=gene-LDO38_RS15190;Dbxref=GenBank:WP_081064982.1;Name=WP_081064982.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: protein motif:HMM:NF012744.6;locus_tag=LDO38_RS15190;product=glycosyltransferase family 4 protein;protein_id=WP_081064982.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 11371 11979 . - . ID=gene-LDO38_RS15195;Name=LDO38_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15195;old_locus_tag=BVI2075_350015 NZ_CAJZAL010000136.1 GeneMarkS-2+ CDS 11371 11979 . - 0 ID=cds-WP_224056504.1;Parent=gene-LDO38_RS15195;Dbxref=GenBank:WP_224056504.1;Name=WP_224056504.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS15195;product=hypothetical protein;protein_id=WP_224056504.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 13212 14330 . + . ID=gene-LDO38_RS15200;Name=LDO38_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15200;old_locus_tag=BVI2075_350018 NZ_CAJZAL010000136.1 GeneMarkS-2+ CDS 13212 14330 . + 0 ID=cds-WP_146125901.1;Parent=gene-LDO38_RS15200;Dbxref=GenBank:WP_146125901.1;Name=WP_146125901.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS15200;product=hypothetical protein;protein_id=WP_146125901.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 14301 15590 . - . ID=gene-LDO38_RS15205;Name=LDO38_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15205;old_locus_tag=BVI2075_350021 NZ_CAJZAL010000136.1 GeneMarkS-2+ CDS 14301 15590 . - 0 ID=cds-WP_011880571.1;Parent=gene-LDO38_RS15205;Dbxref=GenBank:WP_011880571.1;Name=WP_011880571.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS15205;product=hypothetical protein;protein_id=WP_011880571.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 16037 17272 . - . ID=gene-LDO38_RS15210;Name=LDO38_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15210 NZ_CAJZAL010000136.1 Protein Homology CDS 16037 17272 . - 0 ID=cds-WP_176025735.1;Parent=gene-LDO38_RS15210;Dbxref=GenBank:WP_176025735.1;Name=WP_176025735.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF024968.6;locus_tag=LDO38_RS15210;product=glycosyltransferase;protein_id=WP_176025735.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 17333 17932 . - . ID=gene-LDO38_RS15215;Name=LDO38_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15215 NZ_CAJZAL010000136.1 Protein Homology CDS 17333 17932 . - 0 ID=cds-WP_212183671.1;Parent=gene-LDO38_RS15215;Dbxref=GenBank:WP_212183671.1;Name=WP_212183671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880573.1;locus_tag=LDO38_RS15215;product=putative colanic acid biosynthesis acetyltransferase;protein_id=WP_212183671.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 17929 19098 . - . ID=gene-LDO38_RS15220;Name=LDO38_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15220;old_locus_tag=BVI2075_350026 NZ_CAJZAL010000136.1 Protein Homology CDS 17929 19098 . - 0 ID=cds-WP_011880574.1;Parent=gene-LDO38_RS15220;Dbxref=GenBank:WP_011880574.1;Name=WP_011880574.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880574.1;locus_tag=LDO38_RS15220;product=glycosyltransferase family 4 protein;protein_id=WP_011880574.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 19105 20367 . - . ID=gene-LDO38_RS15225;Name=LDO38_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15225;old_locus_tag=BVI2075_350027 NZ_CAJZAL010000136.1 Protein Homology CDS 19105 20367 . - 0 ID=cds-WP_224056505.1;Parent=gene-LDO38_RS15225;Dbxref=GenBank:WP_224056505.1;Name=WP_224056505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880575.1;locus_tag=LDO38_RS15225;product=hypothetical protein;protein_id=WP_224056505.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 20473 21867 . - . ID=gene-LDO38_RS15230;Name=LDO38_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15230;old_locus_tag=BVI2075_350029 NZ_CAJZAL010000136.1 Protein Homology CDS 20473 21867 . - 0 ID=cds-WP_011880576.1;Parent=gene-LDO38_RS15230;Dbxref=GenBank:WP_011880576.1;Name=WP_011880576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880576.1;locus_tag=LDO38_RS15230;product=oligosaccharide flippase family protein;protein_id=WP_011880576.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 21891 22841 . - . ID=gene-LDO38_RS15235;Name=LDO38_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15235;old_locus_tag=BVI2075_350030 NZ_CAJZAL010000136.1 Protein Homology CDS 21891 22841 . - 0 ID=cds-WP_059474603.1;Parent=gene-LDO38_RS15235;Dbxref=GenBank:WP_059474603.1;Name=WP_059474603.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880577.1;locus_tag=LDO38_RS15235;product=GDP-L-fucose synthase family protein;protein_id=WP_059474603.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 22847 23965 . - . ID=gene-LDO38_RS15240;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=LDO38_RS15240;old_locus_tag=BVI2075_350031 NZ_CAJZAL010000136.1 Protein Homology CDS 22847 23965 . - 0 ID=cds-WP_011880578.1;Parent=gene-LDO38_RS15240;Dbxref=GenBank:WP_011880578.1;Name=WP_011880578.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069784.1;locus_tag=LDO38_RS15240;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_011880578.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 24030 26243 . - . ID=gene-LDO38_RS15245;Name=LDO38_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15245;old_locus_tag=BVI2075_350032 NZ_CAJZAL010000136.1 Protein Homology CDS 24030 26243 . - 0 ID=cds-WP_175658123.1;Parent=gene-LDO38_RS15245;Dbxref=GenBank:WP_175658123.1;Name=WP_175658123.1;Ontology_term=GO:0000271;gbkey=CDS;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880579.1;locus_tag=LDO38_RS15245;product=polysaccharide biosynthesis tyrosine autokinase;protein_id=WP_175658123.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 26246 26686 . - . ID=gene-LDO38_RS15250;Name=LDO38_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15250;old_locus_tag=BVI2075_350033 NZ_CAJZAL010000136.1 Protein Homology CDS 26246 26686 . - 0 ID=cds-WP_011880580.1;Parent=gene-LDO38_RS15250;Dbxref=GenBank:WP_011880580.1;Name=WP_011880580.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880580.1;locus_tag=LDO38_RS15250;product=low molecular weight protein-tyrosine-phosphatase;protein_id=WP_011880580.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 26683 27855 . - . ID=gene-LDO38_RS15255;Name=LDO38_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15255;old_locus_tag=BVI2075_350034 NZ_CAJZAL010000136.1 Protein Homology CDS 26683 27855 . - 0 ID=cds-WP_080938793.1;Parent=gene-LDO38_RS15255;Dbxref=GenBank:WP_080938793.1;Name=WP_080938793.1;Ontology_term=GO:0015774,GO:0015159,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=polysaccharide transmembrane transporter activity|0015159||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880581.1;locus_tag=LDO38_RS15255;product=polysaccharide biosynthesis/export family protein;protein_id=WP_080938793.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 27912 29291 . - . ID=gene-LDO38_RS15260;Name=LDO38_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15260;old_locus_tag=BVI2075_350035 NZ_CAJZAL010000136.1 Protein Homology CDS 27912 29291 . - 0 ID=cds-WP_224056506.1;Parent=gene-LDO38_RS15260;Dbxref=GenBank:WP_224056506.1;Name=WP_224056506.1;Ontology_term=GO:0016780;gbkey=CDS;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018431805.1;locus_tag=LDO38_RS15260;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_224056506.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 29337 30854 . - . ID=gene-LDO38_RS15265;Name=LDO38_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15265;old_locus_tag=BVI2075_350036 NZ_CAJZAL010000136.1 Protein Homology CDS 29337 30854 . - 0 ID=cds-WP_175658124.1;Parent=gene-LDO38_RS15265;Dbxref=GenBank:WP_175658124.1;Name=WP_175658124.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399386.1;locus_tag=LDO38_RS15265;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_175658124.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 30947 31909 . - . ID=gene-LDO38_RS15270;Name=LDO38_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15270;old_locus_tag=BVI2075_350037 NZ_CAJZAL010000136.1 Protein Homology CDS 30947 31909 . - 0 ID=cds-WP_060043469.1;Parent=gene-LDO38_RS15270;Dbxref=GenBank:WP_060043469.1;Name=WP_060043469.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726223.1;locus_tag=LDO38_RS15270;product=GlxA family transcriptional regulator;protein_id=WP_060043469.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 32524 32781 . - . ID=gene-LDO38_RS15275;Name=LDO38_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15275;old_locus_tag=BVI2075_350039 NZ_CAJZAL010000136.1 GeneMarkS-2+ CDS 32524 32781 . - 0 ID=cds-WP_011880586.1;Parent=gene-LDO38_RS15275;Dbxref=GenBank:WP_011880586.1;Name=WP_011880586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS15275;product=hypothetical protein;protein_id=WP_011880586.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 33090 33425 . - . ID=gene-LDO38_RS15280;Name=LDO38_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15280 NZ_CAJZAL010000136.1 GeneMarkS-2+ CDS 33090 33425 . - 0 ID=cds-WP_124260117.1;Parent=gene-LDO38_RS15280;Dbxref=GenBank:WP_124260117.1;Name=WP_124260117.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS15280;product=hypothetical protein;protein_id=WP_124260117.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 33572 34033 . + . ID=gene-LDO38_RS15285;Name=LDO38_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15285;old_locus_tag=BVI2075_350040 NZ_CAJZAL010000136.1 Protein Homology CDS 33572 34033 . + 0 ID=cds-WP_011880588.1;Parent=gene-LDO38_RS15285;Dbxref=GenBank:WP_011880588.1;Name=WP_011880588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880588.1;locus_tag=LDO38_RS15285;product=GDP-mannose mannosyl hydrolase;protein_id=WP_011880588.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 34122 35174 . - . ID=gene-LDO38_RS15290;Name=LDO38_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15290;old_locus_tag=BVI2075_350041 NZ_CAJZAL010000136.1 Protein Homology CDS 34122 35174 . - 0 ID=cds-WP_011880589.1;Parent=gene-LDO38_RS15290;Dbxref=GenBank:WP_011880589.1;Name=WP_011880589.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880589.1;locus_tag=LDO38_RS15290;product=GlxA family transcriptional regulator;protein_id=WP_011880589.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 35246 35620 . + . ID=gene-LDO38_RS15295;Name=LDO38_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15295;old_locus_tag=BVI2075_350042 NZ_CAJZAL010000136.1 GeneMarkS-2+ CDS 35246 35620 . + 0 ID=cds-WP_155625045.1;Parent=gene-LDO38_RS15295;Dbxref=GenBank:WP_155625045.1;Name=WP_155625045.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS15295;product=hypothetical protein;protein_id=WP_155625045.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 36867 38027 . + . ID=gene-LDO38_RS15300;Name=LDO38_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15300;old_locus_tag=BVI2075_350047 NZ_CAJZAL010000136.1 Protein Homology CDS 36867 38027 . + 0 ID=cds-WP_011880592.1;Parent=gene-LDO38_RS15300;Dbxref=GenBank:WP_011880592.1;Name=WP_011880592.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880592.1;locus_tag=LDO38_RS15300;product=porin;protein_id=WP_011880592.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq pseudogene 38068 38599 . - . ID=gene-LDO38_RS15305;Name=LDO38_RS15305;end_range=38599,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS15305;partial=true;pseudo=true NZ_CAJZAL010000136.1 Protein Homology CDS 38068 38599 . - 0 ID=cds-LDO38_RS15305;Parent=gene-LDO38_RS15305;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015288,GO:0042834,GO:0009279,GO:0016020;end_range=38599,.;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480561.1;locus_tag=LDO38_RS15305;partial=true;product=OmpA family protein;pseudo=true;transl_table=11 NZ_CAJZAL010000136.1 RefSeq pseudogene 38733 39332 . - . ID=gene-LDO38_RS15310;Name=LDO38_RS15310;end_range=39332,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS15310;old_locus_tag=BVI2075_350049;partial=true;pseudo=true NZ_CAJZAL010000136.1 Protein Homology CDS 38733 39332 . - 0 ID=cds-LDO38_RS15310;Parent=gene-LDO38_RS15310;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007155,GO:0015031;end_range=39332,.;gbkey=CDS;go_process=cell adhesion|0007155||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485575.1;locus_tag=LDO38_RS15310;partial=true;product=YadA family autotransporter adhesin;pseudo=true;transl_table=11 NZ_CAJZAL010000136.1 RefSeq pseudogene 39587 40367 . - . ID=gene-LDO38_RS15315;Name=LDO38_RS15315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS15315;old_locus_tag=BVI2075_350050;pseudo=true NZ_CAJZAL010000136.1 Protein Homology CDS 39587 40367 . - 0 ID=cds-LDO38_RS15315;Parent=gene-LDO38_RS15315;Note=frameshifted;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396328.1;locus_tag=LDO38_RS15315;product=response regulator transcription factor;pseudo=true;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 42092 42916 . + . ID=gene-LDO38_RS15320;Name=LDO38_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15320;old_locus_tag=BVI2075_350053 NZ_CAJZAL010000136.1 Protein Homology CDS 42092 42916 . + 0 ID=cds-WP_011880598.1;Parent=gene-LDO38_RS15320;Dbxref=GenBank:WP_011880598.1;Name=WP_011880598.1;Ontology_term=GO:0000160,GO:0006355,GO:0007165,GO:0000156,GO:0003677,GO:0003700;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880598.1;locus_tag=LDO38_RS15320;product=response regulator transcription factor;protein_id=WP_011880598.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 42909 45263 . + . ID=gene-LDO38_RS15325;Name=LDO38_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15325;old_locus_tag=BVI2075_350054 NZ_CAJZAL010000136.1 Protein Homology CDS 42909 45263 . + 0 ID=cds-WP_224056509.1;Parent=gene-LDO38_RS15325;Dbxref=GenBank:WP_224056509.1;Name=WP_224056509.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880599.1;locus_tag=LDO38_RS15325;product=sensor histidine kinase;protein_id=WP_224056509.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 45364 46452 . - . ID=gene-LDO38_RS15330;Name=yjfF;gbkey=Gene;gene=yjfF;gene_biotype=protein_coding;locus_tag=LDO38_RS15330;old_locus_tag=BVI2075_350055 NZ_CAJZAL010000136.1 Protein Homology CDS 45364 46452 . - 0 ID=cds-WP_011880600.1;Parent=gene-LDO38_RS15330;Dbxref=GenBank:WP_011880600.1;Name=WP_011880600.1;Ontology_term=GO:0042875,GO:0103116,GO:0016020;gbkey=CDS;gene=yjfF;go_component=membrane|0016020||IEA;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026811.1;locus_tag=LDO38_RS15330;product=galactofuranose ABC transporter%2C permease protein YjfF;protein_id=WP_011880600.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 46449 47474 . - . ID=gene-LDO38_RS15335;Name=LDO38_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15335;old_locus_tag=BVI2075_350056 NZ_CAJZAL010000136.1 Protein Homology CDS 46449 47474 . - 0 ID=cds-WP_212152683.1;Parent=gene-LDO38_RS15335;Dbxref=GenBank:WP_212152683.1;Name=WP_212152683.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891042.1;locus_tag=LDO38_RS15335;product=ABC transporter permease;protein_id=WP_212152683.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 47471 48985 . - . ID=gene-LDO38_RS15340;Name=LDO38_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15340;old_locus_tag=BVI2075_350057 NZ_CAJZAL010000136.1 Protein Homology CDS 47471 48985 . - 0 ID=cds-WP_059622252.1;Parent=gene-LDO38_RS15340;Dbxref=GenBank:WP_059622252.1;Name=WP_059622252.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756526.1;locus_tag=LDO38_RS15340;product=sugar ABC transporter ATP-binding protein;protein_id=WP_059622252.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 49056 50018 . - . ID=gene-LDO38_RS15345;Name=LDO38_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15345;old_locus_tag=BVI2075_350059 NZ_CAJZAL010000136.1 Protein Homology CDS 49056 50018 . - 0 ID=cds-WP_034194609.1;Parent=gene-LDO38_RS15345;Dbxref=GenBank:WP_034194609.1;Name=WP_034194609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880603.1;locus_tag=LDO38_RS15345;product=ABC transporter substrate-binding protein;protein_id=WP_034194609.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 50437 51495 . + . ID=gene-LDO38_RS15350;Name=LDO38_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15350;old_locus_tag=BVI2075_350061 NZ_CAJZAL010000136.1 Protein Homology CDS 50437 51495 . + 0 ID=cds-WP_059739315.1;Parent=gene-LDO38_RS15350;Dbxref=GenBank:WP_059739315.1;Name=WP_059739315.1;Ontology_term=GO:0006265,GO:0003677,GO:0003917;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726237.1;locus_tag=LDO38_RS15350;product=DNA topoisomerase IB;protein_id=WP_059739315.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 51536 52660 . - . ID=gene-LDO38_RS15355;Name=pqqE;gbkey=Gene;gene=pqqE;gene_biotype=protein_coding;locus_tag=LDO38_RS15355;old_locus_tag=BVI2075_350062 NZ_CAJZAL010000136.1 Protein Homology CDS 51536 52660 . - 0 ID=cds-WP_014726238.1;Parent=gene-LDO38_RS15355;Dbxref=GenBank:WP_014726238.1;Name=WP_014726238.1;Ontology_term=GO:0018149,GO:0018189,GO:0051539;gbkey=CDS;gene=pqqE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptide cross-linking|0018149||IEA,pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726238.1;locus_tag=LDO38_RS15355;product=pyrroloquinoline quinone biosynthesis protein PqqE;protein_id=WP_014726238.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 52662 52943 . - . ID=gene-LDO38_RS15360;Name=pqqD;gbkey=Gene;gene=pqqD;gene_biotype=protein_coding;locus_tag=LDO38_RS15360;old_locus_tag=BVI2075_350063 NZ_CAJZAL010000136.1 Protein Homology CDS 52662 52943 . - 0 ID=cds-WP_011880606.1;Parent=gene-LDO38_RS15360;Dbxref=GenBank:WP_011880606.1;Name=WP_011880606.1;Ontology_term=GO:0018189,GO:0048038;gbkey=CDS;gene=pqqD;go_function=quinone binding|0048038||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751646.1;locus_tag=LDO38_RS15360;product=pyrroloquinoline quinone biosynthesis peptide chaperone PqqD;protein_id=WP_011880606.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 52940 53659 . - . ID=gene-LDO38_RS15365;Name=pqqC;gbkey=Gene;gene=pqqC;gene_biotype=protein_coding;locus_tag=LDO38_RS15365;old_locus_tag=BVI2075_350064 NZ_CAJZAL010000136.1 Protein Homology CDS 52940 53659 . - 0 ID=cds-WP_011880607.1;Parent=gene-LDO38_RS15365;Dbxref=GenBank:WP_011880607.1;Name=WP_011880607.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqC;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726239.1;locus_tag=LDO38_RS15365;product=pyrroloquinoline-quinone synthase PqqC;protein_id=WP_011880607.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 53661 54584 . - . ID=gene-LDO38_RS15370;Name=pqqB;gbkey=Gene;gene=pqqB;gene_biotype=protein_coding;locus_tag=LDO38_RS15370;old_locus_tag=BVI2075_350065 NZ_CAJZAL010000136.1 Protein Homology CDS 53661 54584 . - 0 ID=cds-WP_011880608.1;Parent=gene-LDO38_RS15370;Dbxref=GenBank:WP_011880608.1;Name=WP_011880608.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqB;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547063.1;locus_tag=LDO38_RS15370;product=pyrroloquinoline quinone biosynthesis protein PqqB;protein_id=WP_011880608.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 54649 54723 . - . ID=gene-LDO38_RS15375;Name=pqqA;gbkey=Gene;gene=pqqA;gene_biotype=protein_coding;locus_tag=LDO38_RS15375;old_locus_tag=BVI2075_350066 NZ_CAJZAL010000136.1 Protein Homology CDS 54649 54723 . - 0 ID=cds-WP_006410019.1;Parent=gene-LDO38_RS15375;Dbxref=GenBank:WP_006410019.1;Name=WP_006410019.1;Ontology_term=GO:0018189,GO:0003824;gbkey=CDS;gene=pqqA;go_function=catalytic activity|0003824||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007178434.1;locus_tag=LDO38_RS15375;product=pyrroloquinoline quinone precursor peptide PqqA;protein_id=WP_006410019.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq gene 55024 57039 . - . ID=gene-LDO38_RS15380;Name=LDO38_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15380;old_locus_tag=BVI2075_350067 NZ_CAJZAL010000136.1 Protein Homology CDS 55024 57039 . - 0 ID=cds-WP_224056508.1;Parent=gene-LDO38_RS15380;Dbxref=GenBank:WP_224056508.1;Name=WP_224056508.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880609.1;locus_tag=LDO38_RS15380;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_224056508.1;transl_table=11 NZ_CAJZAL010000136.1 RefSeq pseudogene 57547 57721 . + . ID=gene-LDO38_RS15385;Name=LDO38_RS15385;end_range=57721,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS15385;partial=true;pseudo=true NZ_CAJZAL010000136.1 Protein Homology CDS 57547 57721 . + 0 ID=cds-LDO38_RS15385;Parent=gene-LDO38_RS15385;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=57721,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880610.1;locus_tag=LDO38_RS15385;partial=true;product=alpha/beta fold hydrolase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000137.1 1 59404 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000137.1 RefSeq region 1 59404 . + . ID=NZ_CAJZAL010000137.1:1..59404;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_36 NZ_CAJZAL010000137.1 RefSeq gene 1 537 . - . ID=gene-LDO38_RS15390;Name=LDO38_RS15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15390;partial=true;start_range=.,1 NZ_CAJZAL010000137.1 GeneMarkS-2+ CDS 1 537 . - 0 ID=cds-WP_224056510.1;Parent=gene-LDO38_RS15390;Dbxref=GenBank:WP_224056510.1;Name=WP_224056510.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS15390;partial=true;product=hypothetical protein;protein_id=WP_224056510.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 706 1611 . - . ID=gene-LDO38_RS15395;Name=LDO38_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15395;old_locus_tag=BVI2075_360002 NZ_CAJZAL010000137.1 Protein Homology CDS 706 1611 . - 0 ID=cds-WP_011880547.1;Parent=gene-LDO38_RS15395;Dbxref=GenBank:WP_011880547.1;Name=WP_011880547.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337044.1;locus_tag=LDO38_RS15395;product=LysR family transcriptional regulator;protein_id=WP_011880547.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 1732 2325 . + . ID=gene-LDO38_RS15400;Name=LDO38_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15400;old_locus_tag=BVI2075_360003 NZ_CAJZAL010000137.1 Protein Homology CDS 1732 2325 . + 0 ID=cds-WP_034193658.1;Parent=gene-LDO38_RS15400;Dbxref=GenBank:WP_034193658.1;Name=WP_034193658.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366281.1;locus_tag=LDO38_RS15400;product=flavodoxin family protein;protein_id=WP_034193658.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 2398 3453 . + . ID=gene-LDO38_RS15405;Name=LDO38_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15405;old_locus_tag=BVI2075_360004 NZ_CAJZAL010000137.1 Protein Homology CDS 2398 3453 . + 0 ID=cds-WP_224056511.1;Parent=gene-LDO38_RS15405;Dbxref=GenBank:WP_224056511.1;Name=WP_224056511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549240.1;locus_tag=LDO38_RS15405;product=aldo/keto reductase;protein_id=WP_224056511.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 3523 4251 . - . ID=gene-LDO38_RS15410;Name=LDO38_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15410;old_locus_tag=BVI2075_360005 NZ_CAJZAL010000137.1 Protein Homology CDS 3523 4251 . - 0 ID=cds-WP_014726188.1;Parent=gene-LDO38_RS15410;Dbxref=GenBank:WP_014726188.1;Name=WP_014726188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880544.1;locus_tag=LDO38_RS15410;product=ABC transporter substrate-binding protein;protein_id=WP_014726188.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 4403 4696 . - . ID=gene-LDO38_RS15415;Name=LDO38_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15415;old_locus_tag=BVI2075_360006 NZ_CAJZAL010000137.1 Protein Homology CDS 4403 4696 . - 0 ID=cds-WP_011880543.1;Parent=gene-LDO38_RS15415;Dbxref=GenBank:WP_011880543.1;Name=WP_011880543.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726186.1;locus_tag=LDO38_RS15415;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_011880543.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 4902 6356 . + . ID=gene-LDO38_RS15420;Name=LDO38_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15420;old_locus_tag=BVI2075_360007 NZ_CAJZAL010000137.1 Protein Homology CDS 4902 6356 . + 0 ID=cds-WP_045579847.1;Parent=gene-LDO38_RS15420;Dbxref=GenBank:WP_045579847.1;Name=WP_045579847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372321.1;locus_tag=LDO38_RS15420;product=HD domain-containing phosphohydrolase;protein_id=WP_045579847.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 6423 8195 . + . ID=gene-LDO38_RS15425;Name=LDO38_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15425;old_locus_tag=BVI2075_360009 NZ_CAJZAL010000137.1 Protein Homology CDS 6423 8195 . + 0 ID=cds-WP_224056512.1;Parent=gene-LDO38_RS15425;Dbxref=GenBank:WP_224056512.1;Name=WP_224056512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880541.1;locus_tag=LDO38_RS15425;product=histidine kinase;protein_id=WP_224056512.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 8218 9294 . - . ID=gene-LDO38_RS15430;Name=LDO38_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15430;old_locus_tag=BVI2075_360010 NZ_CAJZAL010000137.1 Protein Homology CDS 8218 9294 . - 0 ID=cds-WP_059461678.1;Parent=gene-LDO38_RS15430;Dbxref=GenBank:WP_059461678.1;Name=WP_059461678.1;Ontology_term=GO:0050526;gbkey=CDS;go_function=poly(3-hydroxybutyrate) depolymerase activity|0050526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753340.1;locus_tag=LDO38_RS15430;product=extracellular catalytic domain type 1 short-chain-length polyhydroxyalkanoate depolymerase;protein_id=WP_059461678.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 9633 10016 . - . ID=gene-LDO38_RS15435;Name=LDO38_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15435;old_locus_tag=BVI2075_360011 NZ_CAJZAL010000137.1 Protein Homology CDS 9633 10016 . - 0 ID=cds-WP_011880539.1;Parent=gene-LDO38_RS15435;Dbxref=GenBank:WP_011880539.1;Name=WP_011880539.1;Ontology_term=GO:0000271,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661156.1;locus_tag=LDO38_RS15435;product=GtrA family protein;protein_id=WP_011880539.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 10033 11076 . - . ID=gene-LDO38_RS15440;Name=LDO38_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15440;old_locus_tag=BVI2075_360012 NZ_CAJZAL010000137.1 Protein Homology CDS 10033 11076 . - 0 ID=cds-WP_011880538.1;Parent=gene-LDO38_RS15440;Dbxref=GenBank:WP_011880538.1;Name=WP_011880538.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004548396.1;locus_tag=LDO38_RS15440;product=glycosyltransferase family 2 protein;protein_id=WP_011880538.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 11101 12480 . - . ID=gene-LDO38_RS15445;Name=LDO38_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15445;old_locus_tag=BVI2075_360013 NZ_CAJZAL010000137.1 Protein Homology CDS 11101 12480 . - 0 ID=cds-WP_224056513.1;Parent=gene-LDO38_RS15445;Dbxref=GenBank:WP_224056513.1;Name=WP_224056513.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336897.1;locus_tag=LDO38_RS15445;product=glycosyltransferase family 87 protein;protein_id=WP_224056513.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 12477 13715 . - . ID=gene-LDO38_RS15450;Name=LDO38_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15450;old_locus_tag=BVI2075_360014 NZ_CAJZAL010000137.1 Protein Homology CDS 12477 13715 . - 0 ID=cds-WP_212172237.1;Parent=gene-LDO38_RS15450;Dbxref=GenBank:WP_212172237.1;Name=WP_212172237.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753344.1;locus_tag=LDO38_RS15450;product=glycosyltransferase family 87 protein;protein_id=WP_212172237.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 14755 14937 . + . ID=gene-LDO38_RS15455;Name=LDO38_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15455;old_locus_tag=BVI2075_360015 NZ_CAJZAL010000137.1 Protein Homology CDS 14755 14937 . + 0 ID=cds-WP_011880534.1;Parent=gene-LDO38_RS15455;Dbxref=GenBank:WP_011880534.1;Name=WP_011880534.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372332.1;locus_tag=LDO38_RS15455;product=Flp family type IVb pilin;protein_id=WP_011880534.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 15108 15314 . + . ID=gene-LDO38_RS15460;Name=LDO38_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15460;old_locus_tag=BVI2075_360016 NZ_CAJZAL010000137.1 Protein Homology CDS 15108 15314 . + 0 ID=cds-WP_011880533.1;Parent=gene-LDO38_RS15460;Dbxref=GenBank:WP_011880533.1;Name=WP_011880533.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880533.1;locus_tag=LDO38_RS15460;product=Flp family type IVb pilin;protein_id=WP_011880533.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 15346 15885 . + . ID=gene-LDO38_RS15465;Name=LDO38_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15465;old_locus_tag=BVI2075_360018 NZ_CAJZAL010000137.1 Protein Homology CDS 15346 15885 . + 0 ID=cds-WP_011880532.1;Parent=gene-LDO38_RS15465;Dbxref=GenBank:WP_011880532.1;Name=WP_011880532.1;Ontology_term=GO:0006508,GO:0004190;gbkey=CDS;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549057.1;locus_tag=LDO38_RS15465;product=A24 family peptidase;protein_id=WP_011880532.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 15918 17318 . + . ID=gene-LDO38_RS15470;Name=LDO38_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15470;old_locus_tag=BVI2075_360017 NZ_CAJZAL010000137.1 Protein Homology CDS 15918 17318 . + 0 ID=cds-WP_011880531.1;Parent=gene-LDO38_RS15470;Dbxref=GenBank:WP_011880531.1;Name=WP_011880531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498089.1;locus_tag=LDO38_RS15470;product=ATP-binding protein;protein_id=WP_011880531.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 17354 18199 . + . ID=gene-LDO38_RS15475;Name=cpaB;gbkey=Gene;gene=cpaB;gene_biotype=protein_coding;locus_tag=LDO38_RS15475;old_locus_tag=BVI2075_360019 NZ_CAJZAL010000137.1 Protein Homology CDS 17354 18199 . + 0 ID=cds-WP_011880530.1;Parent=gene-LDO38_RS15475;Dbxref=GenBank:WP_011880530.1;Name=WP_011880530.1;gbkey=CDS;gene=cpaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603420.1;locus_tag=LDO38_RS15475;product=Flp pilus assembly protein CpaB;protein_id=WP_011880530.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 18312 20246 . + . ID=gene-LDO38_RS15480;Name=LDO38_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15480;old_locus_tag=BVI2075_360020 NZ_CAJZAL010000137.1 Protein Homology CDS 18312 20246 . + 0 ID=cds-WP_059579878.1;Parent=gene-LDO38_RS15480;Dbxref=GenBank:WP_059579878.1;Name=WP_059579878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549054.1;locus_tag=LDO38_RS15480;product=type II and III secretion system protein family protein;protein_id=WP_059579878.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 20267 20560 . + . ID=gene-LDO38_RS15485;Name=LDO38_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15485;old_locus_tag=BVI2075_360021 NZ_CAJZAL010000137.1 Protein Homology CDS 20267 20560 . + 0 ID=cds-WP_041494398.1;Parent=gene-LDO38_RS15485;Dbxref=GenBank:WP_041494398.1;Name=WP_041494398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661166.1;locus_tag=LDO38_RS15485;product=hypothetical protein;protein_id=WP_041494398.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 20587 21858 . + . ID=gene-LDO38_RS15490;Name=LDO38_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15490;old_locus_tag=BVI2075_360022 NZ_CAJZAL010000137.1 Protein Homology CDS 20587 21858 . + 0 ID=cds-WP_212200458.1;Parent=gene-LDO38_RS15490;Dbxref=GenBank:WP_212200458.1;Name=WP_212200458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372339.1;locus_tag=LDO38_RS15490;product=TadE/TadG family type IV pilus assembly protein;protein_id=WP_212200458.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 21902 22405 . + . ID=gene-LDO38_RS15495;Name=LDO38_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15495;old_locus_tag=BVI2075_360024 NZ_CAJZAL010000137.1 Protein Homology CDS 21902 22405 . + 0 ID=cds-WP_175658136.1;Parent=gene-LDO38_RS15495;Dbxref=GenBank:WP_175658136.1;Name=WP_175658136.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602875.1;locus_tag=LDO38_RS15495;product=TadE/TadG family type IV pilus assembly protein;protein_id=WP_175658136.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 22402 22845 . + . ID=gene-LDO38_RS15500;Name=LDO38_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15500;old_locus_tag=BVI2075_360025 NZ_CAJZAL010000137.1 Protein Homology CDS 22402 22845 . + 0 ID=cds-WP_011880525.1;Parent=gene-LDO38_RS15500;Dbxref=GenBank:WP_011880525.1;Name=WP_011880525.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372341.1;locus_tag=LDO38_RS15500;product=TadE/TadG family type IV pilus assembly protein;protein_id=WP_011880525.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 22866 24074 . + . ID=gene-LDO38_RS15505;Name=LDO38_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15505;old_locus_tag=BVI2075_360026 NZ_CAJZAL010000137.1 Protein Homology CDS 22866 24074 . + 0 ID=cds-WP_034193646.1;Parent=gene-LDO38_RS15505;Dbxref=GenBank:WP_034193646.1;Name=WP_034193646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908183.1;locus_tag=LDO38_RS15505;product=AAA family ATPase;protein_id=WP_034193646.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 24094 25461 . + . ID=gene-LDO38_RS15510;Name=LDO38_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15510;old_locus_tag=BVI2075_360027 NZ_CAJZAL010000137.1 Protein Homology CDS 24094 25461 . + 0 ID=cds-WP_011880523.1;Parent=gene-LDO38_RS15510;Dbxref=GenBank:WP_011880523.1;Name=WP_011880523.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880523.1;locus_tag=LDO38_RS15510;product=CpaF family protein;protein_id=WP_011880523.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 25479 26456 . + . ID=gene-LDO38_RS15515;Name=LDO38_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15515;old_locus_tag=BVI2075_360028 NZ_CAJZAL010000137.1 Protein Homology CDS 25479 26456 . + 0 ID=cds-WP_011880522.1;Parent=gene-LDO38_RS15515;Dbxref=GenBank:WP_011880522.1;Name=WP_011880522.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004537325.1;locus_tag=LDO38_RS15515;product=type II secretion system F family protein;protein_id=WP_011880522.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 26495 27478 . + . ID=gene-LDO38_RS15520;Name=LDO38_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15520;old_locus_tag=BVI2075_360029 NZ_CAJZAL010000137.1 Protein Homology CDS 26495 27478 . + 0 ID=cds-WP_011880521.1;Parent=gene-LDO38_RS15520;Dbxref=GenBank:WP_011880521.1;Name=WP_011880521.1;Ontology_term=GO:0015628,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486292.1;locus_tag=LDO38_RS15520;product=type II secretion system F family protein;protein_id=WP_011880521.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 27788 28747 . - . ID=gene-LDO38_RS15525;Name=LDO38_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15525;old_locus_tag=BVI2075_360030 NZ_CAJZAL010000137.1 Protein Homology CDS 27788 28747 . - 0 ID=cds-WP_224056514.1;Parent=gene-LDO38_RS15525;Dbxref=GenBank:WP_224056514.1;Name=WP_224056514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880520.1;locus_tag=LDO38_RS15525;product=SphA family protein;protein_id=WP_224056514.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 28781 29311 . - . ID=gene-LDO38_RS15530;Name=LDO38_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15530;old_locus_tag=BVI2075_360031 NZ_CAJZAL010000137.1 Protein Homology CDS 28781 29311 . - 0 ID=cds-WP_046425710.1;Parent=gene-LDO38_RS15530;Dbxref=GenBank:WP_046425710.1;Name=WP_046425710.1;Ontology_term=GO:0010181,GO:0016491,GO:0016646;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on the CH-NH group of donors%2C NAD or NADP as acceptor|0016646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726171.1;locus_tag=LDO38_RS15530;product=flavin reductase family protein;protein_id=WP_046425710.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 29308 30555 . - . ID=gene-LDO38_RS15535;Name=LDO38_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15535;old_locus_tag=BVI2075_360032 NZ_CAJZAL010000137.1 Protein Homology CDS 29308 30555 . - 0 ID=cds-WP_059890443.1;Parent=gene-LDO38_RS15535;Dbxref=GenBank:WP_059890443.1;Name=WP_059890443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880518.1;locus_tag=LDO38_RS15535;product=styrene monooxygenase/indole monooxygenase family protein;protein_id=WP_059890443.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 30619 31407 . - . ID=gene-LDO38_RS15540;Name=LDO38_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15540;old_locus_tag=BVI2075_360033 NZ_CAJZAL010000137.1 Protein Homology CDS 30619 31407 . - 0 ID=cds-WP_175983613.1;Parent=gene-LDO38_RS15540;Dbxref=GenBank:WP_175983613.1;Name=WP_175983613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549043.1;locus_tag=LDO38_RS15540;product=SDR family oxidoreductase;protein_id=WP_175983613.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 31473 32702 . - . ID=gene-LDO38_RS15545;Name=LDO38_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15545;old_locus_tag=BVI2075_360034 NZ_CAJZAL010000137.1 Protein Homology CDS 31473 32702 . - 0 ID=cds-WP_014726168.1;Parent=gene-LDO38_RS15545;Dbxref=GenBank:WP_014726168.1;Name=WP_014726168.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372353.1;locus_tag=LDO38_RS15545;product=dienelactone hydrolase family protein;protein_id=WP_014726168.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 33056 34081 . + . ID=gene-LDO38_RS15550;Name=LDO38_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15550;old_locus_tag=BVI2075_360035 NZ_CAJZAL010000137.1 Protein Homology CDS 33056 34081 . + 0 ID=cds-WP_014726166.1;Parent=gene-LDO38_RS15550;Dbxref=GenBank:WP_014726166.1;Name=WP_014726166.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726166.1;locus_tag=LDO38_RS15550;product=AraC family transcriptional regulator;protein_id=WP_014726166.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 34253 35446 . + . ID=gene-LDO38_RS15555;Name=LDO38_RS15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15555;old_locus_tag=BVI2075_360036 NZ_CAJZAL010000137.1 Protein Homology CDS 34253 35446 . + 0 ID=cds-WP_059463223.1;Parent=gene-LDO38_RS15555;Dbxref=GenBank:WP_059463223.1;Name=WP_059463223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726165.1;locus_tag=LDO38_RS15555;product=NnrS family protein;protein_id=WP_059463223.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 35624 36733 . - . ID=gene-LDO38_RS15560;Name=LDO38_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15560;old_locus_tag=BVI2075_360037 NZ_CAJZAL010000137.1 Protein Homology CDS 35624 36733 . - 0 ID=cds-WP_034193640.1;Parent=gene-LDO38_RS15560;Dbxref=GenBank:WP_034193640.1;Name=WP_034193640.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753041.1;locus_tag=LDO38_RS15560;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_034193640.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 36789 37064 . - . ID=gene-LDO38_RS15565;Name=frmR;gbkey=Gene;gene=frmR;gene_biotype=protein_coding;locus_tag=LDO38_RS15565;old_locus_tag=BVI2075_360038 NZ_CAJZAL010000137.1 Protein Homology CDS 36789 37064 . - 0 ID=cds-WP_011880512.1;Parent=gene-LDO38_RS15565;Dbxref=GenBank:WP_011880512.1;Name=WP_011880512.1;gbkey=CDS;gene=frmR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880512.1;locus_tag=LDO38_RS15565;product=formaldehyde-responsive transcriptional repressor FrmR;protein_id=WP_011880512.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 37462 38181 . + . ID=gene-LDO38_RS15570;Name=LDO38_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15570;old_locus_tag=BVI2075_360039 NZ_CAJZAL010000137.1 Protein Homology CDS 37462 38181 . + 0 ID=cds-WP_224056515.1;Parent=gene-LDO38_RS15570;Dbxref=GenBank:WP_224056515.1;Name=WP_224056515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372073.1;locus_tag=LDO38_RS15570;product=autoinducer binding domain-containing protein;protein_id=WP_224056515.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 38225 39826 . - . ID=gene-LDO38_RS15575;Name=LDO38_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15575;old_locus_tag=BVI2075_360040 NZ_CAJZAL010000137.1 Protein Homology CDS 38225 39826 . - 0 ID=cds-WP_224056516.1;Parent=gene-LDO38_RS15575;Dbxref=GenBank:WP_224056516.1;Name=WP_224056516.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: protein motif:HMM:NF013646.6;locus_tag=LDO38_RS15575;product=FAD-dependent oxidoreductase;protein_id=WP_224056516.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 40036 40737 . + . ID=gene-LDO38_RS15580;Name=LDO38_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15580;old_locus_tag=BVI2075_360041 NZ_CAJZAL010000137.1 Protein Homology CDS 40036 40737 . + 0 ID=cds-WP_175983616.1;Parent=gene-LDO38_RS15580;Dbxref=GenBank:WP_175983616.1;Name=WP_175983616.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015700.6;locus_tag=LDO38_RS15580;product=AfsA-related hotdog domain-containing protein;protein_id=WP_175983616.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 40782 41462 . + . ID=gene-LDO38_RS15585;Name=LDO38_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15585;old_locus_tag=BVI2075_360042 NZ_CAJZAL010000137.1 Protein Homology CDS 40782 41462 . + 0 ID=cds-WP_081054717.1;Parent=gene-LDO38_RS15585;Dbxref=GenBank:WP_081054717.1;Name=WP_081054717.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:TIGR01490.1;locus_tag=LDO38_RS15585;product=HAD family hydrolase;protein_id=WP_081054717.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 41464 41694 . + . ID=gene-LDO38_RS15590;Name=LDO38_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15590;old_locus_tag=BVI2075_360044 NZ_CAJZAL010000137.1 GeneMarkS-2+ CDS 41464 41694 . + 0 ID=cds-WP_059717777.1;Parent=gene-LDO38_RS15590;Dbxref=GenBank:WP_059717777.1;Name=WP_059717777.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS15590;product=hypothetical protein;protein_id=WP_059717777.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 41758 42753 . + . ID=gene-LDO38_RS15595;Name=LDO38_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15595;old_locus_tag=BVI2075_360045 NZ_CAJZAL010000137.1 Protein Homology CDS 41758 42753 . + 0 ID=cds-WP_224056517.1;Parent=gene-LDO38_RS15595;Dbxref=GenBank:WP_224056517.1;Name=WP_224056517.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: protein motif:HMM:NF020130.6;locus_tag=LDO38_RS15595;product=3-oxoacyl-ACP synthase III family protein;protein_id=WP_224056517.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 42769 43740 . + . ID=gene-LDO38_RS15600;Name=LDO38_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15600;old_locus_tag=BVI2075_360046 NZ_CAJZAL010000137.1 Protein Homology CDS 42769 43740 . + 0 ID=cds-WP_140995043.1;Parent=gene-LDO38_RS15600;Dbxref=GenBank:WP_140995043.1;Name=WP_140995043.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: protein motif:HMM:NF006829.0;locus_tag=LDO38_RS15600;product=3-oxoacyl-ACP synthase III family protein;protein_id=WP_140995043.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 43818 44192 . + . ID=gene-LDO38_RS15605;Name=LDO38_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15605;old_locus_tag=BVI2075_360047 NZ_CAJZAL010000137.1 Protein Homology CDS 43818 44192 . + 0 ID=cds-WP_059717774.1;Parent=gene-LDO38_RS15605;Dbxref=GenBank:WP_059717774.1;Name=WP_059717774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880510.1;locus_tag=LDO38_RS15605;product=nuclear transport factor 2 family protein;protein_id=WP_059717774.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 44271 45083 . + . ID=gene-LDO38_RS15610;Name=LDO38_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15610;old_locus_tag=BVI2075_360048 NZ_CAJZAL010000137.1 Protein Homology CDS 44271 45083 . + 0 ID=cds-WP_059548619.1;Parent=gene-LDO38_RS15610;Dbxref=GenBank:WP_059548619.1;Name=WP_059548619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335650.1;locus_tag=LDO38_RS15610;product=hypothetical protein;protein_id=WP_059548619.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 45115 46665 . + . ID=gene-LDO38_RS15615;Name=LDO38_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15615;old_locus_tag=BVI2075_360049 NZ_CAJZAL010000137.1 Protein Homology CDS 45115 46665 . + 0 ID=cds-WP_059474504.1;Parent=gene-LDO38_RS15615;Dbxref=GenBank:WP_059474504.1;Name=WP_059474504.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880509.1;locus_tag=LDO38_RS15615;product=MFS transporter;protein_id=WP_059474504.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 46879 47967 . - . ID=gene-LDO38_RS15620;Name=LDO38_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15620;old_locus_tag=BVI2075_360050 NZ_CAJZAL010000137.1 Protein Homology CDS 46879 47967 . - 0 ID=cds-WP_011880508.1;Parent=gene-LDO38_RS15620;Dbxref=GenBank:WP_011880508.1;Name=WP_011880508.1;Ontology_term=GO:0005975,GO:0016857,GO:0030246;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726161.1;locus_tag=LDO38_RS15620;product=aldose epimerase family protein;protein_id=WP_011880508.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 47993 49186 . - . ID=gene-LDO38_RS15625;Name=LDO38_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15625;old_locus_tag=BVI2075_360051 NZ_CAJZAL010000137.1 Protein Homology CDS 47993 49186 . - 0 ID=cds-WP_011880507.1;Parent=gene-LDO38_RS15625;Dbxref=GenBank:WP_011880507.1;Name=WP_011880507.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403516.1;locus_tag=LDO38_RS15625;product=XylR family transcriptional regulator;protein_id=WP_011880507.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 49450 50772 . + . ID=gene-LDO38_RS15630;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=LDO38_RS15630;old_locus_tag=BVI2075_360052 NZ_CAJZAL010000137.1 Protein Homology CDS 49450 50772 . + 0 ID=cds-WP_059548632.1;Parent=gene-LDO38_RS15630;Dbxref=GenBank:WP_059548632.1;Name=WP_059548632.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880506.1;locus_tag=LDO38_RS15630;product=xylose isomerase;protein_id=WP_059548632.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 50777 52255 . + . ID=gene-LDO38_RS15635;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=LDO38_RS15635;old_locus_tag=BVI2075_360053 NZ_CAJZAL010000137.1 Protein Homology CDS 50777 52255 . + 0 ID=cds-WP_212159407.1;Parent=gene-LDO38_RS15635;Dbxref=GenBank:WP_212159407.1;Name=WP_212159407.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397034.1;locus_tag=LDO38_RS15635;product=xylulokinase;protein_id=WP_212159407.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 52342 53370 . + . ID=gene-LDO38_RS15640;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=LDO38_RS15640;old_locus_tag=BVI2075_360055 NZ_CAJZAL010000137.1 Protein Homology CDS 52342 53370 . + 0 ID=cds-WP_014726158.1;Parent=gene-LDO38_RS15640;Dbxref=GenBank:WP_014726158.1;Name=WP_014726158.1;Ontology_term=GO:0015753,GO:0015614,GO:0033222,GO:0055052;gbkey=CDS;gene=xylF;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type D-xylose transporter activity|0015614||IEA,xylose binding|0033222||IEA;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011490741.1;locus_tag=LDO38_RS15640;product=D-xylose ABC transporter substrate-binding protein;protein_id=WP_014726158.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 53442 55001 . + . ID=gene-LDO38_RS15645;Name=xylG;gbkey=Gene;gene=xylG;gene_biotype=protein_coding;locus_tag=LDO38_RS15645;old_locus_tag=BVI2075_360054 NZ_CAJZAL010000137.1 Protein Homology CDS 53442 55001 . + 0 ID=cds-WP_175999745.1;Parent=gene-LDO38_RS15645;Dbxref=GenBank:WP_175999745.1;Name=WP_175999745.1;Ontology_term=GO:0015753,GO:0005524,GO:0015614,GO:0016020;gbkey=CDS;gene=xylG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-xylose transporter activity|0015614||IEA;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335463.1;locus_tag=LDO38_RS15645;product=D-xylose ABC transporter ATP-binding protein;protein_id=WP_175999745.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 54998 56197 . + . ID=gene-LDO38_RS15650;Name=LDO38_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15650;old_locus_tag=BVI2075_360056 NZ_CAJZAL010000137.1 Protein Homology CDS 54998 56197 . + 0 ID=cds-WP_011880502.1;Parent=gene-LDO38_RS15650;Dbxref=GenBank:WP_011880502.1;Name=WP_011880502.1;Ontology_term=GO:0008643,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757042.1;locus_tag=LDO38_RS15650;product=sugar ABC transporter permease;protein_id=WP_011880502.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 56319 57815 . + . ID=gene-LDO38_RS15655;Name=LDO38_RS15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15655;old_locus_tag=BVI2075_360059 NZ_CAJZAL010000137.1 Protein Homology CDS 56319 57815 . + 0 ID=cds-WP_212173830.1;Parent=gene-LDO38_RS15655;Dbxref=GenBank:WP_212173830.1;Name=WP_212173830.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726157.1;locus_tag=LDO38_RS15655;product=sensor histidine kinase;protein_id=WP_212173830.1;transl_table=11 NZ_CAJZAL010000137.1 RefSeq gene 57800 59188 . + . ID=gene-LDO38_RS15660;Name=LDO38_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15660;old_locus_tag=BVI2075_360058 NZ_CAJZAL010000137.1 Protein Homology CDS 57800 59188 . + 0 ID=cds-WP_059890431.1;Parent=gene-LDO38_RS15660;Dbxref=GenBank:WP_059890431.1;Name=WP_059890431.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677,GO:0005524;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336844.1;locus_tag=LDO38_RS15660;product=sigma-54-dependent transcriptional regulator;protein_id=WP_059890431.1;transl_table=11 ##sequence-region NZ_CAJZAL010000138.1 1 124104 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000138.1 RefSeq region 1 124104 . + . ID=NZ_CAJZAL010000138.1:1..124104;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_37 NZ_CAJZAL010000138.1 RefSeq pseudogene 1 181 . + . ID=gene-LDO38_RS30550;Name=LDO38_RS30550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30550;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000138.1 Protein Homology CDS 1 181 . + 1 ID=cds-LDO38_RS30550;Parent=gene-LDO38_RS30550;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399402.1;locus_tag=LDO38_RS30550;partial=true;product=MFS transporter;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 213 1260 . - . ID=gene-LDO38_RS15670;Name=LDO38_RS15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15670;old_locus_tag=BVI2075_370002;partial=true;start_range=.,213 NZ_CAJZAL010000138.1 Protein Homology CDS 213 1260 . - 0 ID=cds-WP_224056526.1;Parent=gene-LDO38_RS15670;Dbxref=GenBank:WP_224056526.1;Name=WP_224056526.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482818.1;locus_tag=LDO38_RS15670;partial=true;product=glycosyltransferase family 4 protein;protein_id=WP_224056526.1;start_range=.,213;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 1360 2547 . - . ID=gene-LDO38_RS15675;Name=LDO38_RS15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15675;old_locus_tag=BVI2075_370003 NZ_CAJZAL010000138.1 Protein Homology CDS 1360 2547 . - 0 ID=cds-WP_014724616.1;Parent=gene-LDO38_RS15675;Dbxref=GenBank:WP_014724616.1;Name=WP_014724616.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881541.1;locus_tag=LDO38_RS15675;product=glycosyltransferase family 4 protein;protein_id=WP_014724616.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 2544 4010 . - . ID=gene-LDO38_RS15680;Name=LDO38_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15680;old_locus_tag=BVI2075_370004 NZ_CAJZAL010000138.1 Protein Homology CDS 2544 4010 . - 0 ID=cds-WP_011881540.1;Parent=gene-LDO38_RS15680;Dbxref=GenBank:WP_011881540.1;Name=WP_011881540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881540.1;locus_tag=LDO38_RS15680;product=glucose-6-phosphate isomerase;protein_id=WP_011881540.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 4007 5143 . - . ID=gene-LDO38_RS15685;Name=LDO38_RS15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15685;old_locus_tag=BVI2075_370005 NZ_CAJZAL010000138.1 Protein Homology CDS 4007 5143 . - 0 ID=cds-WP_045578190.1;Parent=gene-LDO38_RS15685;Dbxref=GenBank:WP_045578190.1;Name=WP_045578190.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416882.1;locus_tag=LDO38_RS15685;product=glycosyltransferase family 4 protein;protein_id=WP_045578190.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 5187 6146 . - . ID=gene-LDO38_RS15690;Name=LDO38_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15690;old_locus_tag=BVI2075_370006 NZ_CAJZAL010000138.1 Protein Homology CDS 5187 6146 . - 0 ID=cds-WP_014724615.1;Parent=gene-LDO38_RS15690;Dbxref=GenBank:WP_014724615.1;Name=WP_014724615.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482934.1;locus_tag=LDO38_RS15690;product=glycosyltransferase family 2 protein;protein_id=WP_014724615.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 6178 8403 . - . ID=gene-LDO38_RS15695;Name=LDO38_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15695;old_locus_tag=BVI2075_370007 NZ_CAJZAL010000138.1 Protein Homology CDS 6178 8403 . - 0 ID=cds-WP_011881537.1;Parent=gene-LDO38_RS15695;Dbxref=GenBank:WP_011881537.1;Name=WP_011881537.1;Ontology_term=GO:0000271;gbkey=CDS;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765453.1;locus_tag=LDO38_RS15695;product=polysaccharide biosynthesis tyrosine autokinase;protein_id=WP_011881537.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 8454 9632 . - . ID=gene-LDO38_RS15700;Name=LDO38_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15700;old_locus_tag=BVI2075_370008 NZ_CAJZAL010000138.1 Protein Homology CDS 8454 9632 . - 0 ID=cds-WP_034194966.1;Parent=gene-LDO38_RS15700;Dbxref=GenBank:WP_034194966.1;Name=WP_034194966.1;Ontology_term=GO:0015774,GO:0015159,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=polysaccharide transmembrane transporter activity|0015159||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009978106.1;locus_tag=LDO38_RS15700;product=polysaccharide biosynthesis/export family protein;protein_id=WP_034194966.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 9626 10069 . - . ID=gene-LDO38_RS15705;Name=LDO38_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15705;old_locus_tag=BVI2075_370009 NZ_CAJZAL010000138.1 Protein Homology CDS 9626 10069 . - 0 ID=cds-WP_011881535.1;Parent=gene-LDO38_RS15705;Dbxref=GenBank:WP_011881535.1;Name=WP_011881535.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900072.1;locus_tag=LDO38_RS15705;product=low molecular weight protein-tyrosine-phosphatase;protein_id=WP_011881535.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 10107 11522 . - . ID=gene-LDO38_RS15710;Name=LDO38_RS15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15710;old_locus_tag=BVI2075_370010 NZ_CAJZAL010000138.1 Protein Homology CDS 10107 11522 . - 0 ID=cds-WP_011881534.1;Parent=gene-LDO38_RS15710;Dbxref=GenBank:WP_011881534.1;Name=WP_011881534.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765450.1;locus_tag=LDO38_RS15710;product=UDP-glucose dehydrogenase family protein;protein_id=WP_011881534.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 11589 12962 . - . ID=gene-LDO38_RS15715;Name=LDO38_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15715;old_locus_tag=BVI2075_370011 NZ_CAJZAL010000138.1 Protein Homology CDS 11589 12962 . - 0 ID=cds-WP_011881533.1;Parent=gene-LDO38_RS15715;Dbxref=GenBank:WP_011881533.1;Name=WP_011881533.1;Ontology_term=GO:0016780;gbkey=CDS;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525082.1;locus_tag=LDO38_RS15715;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_011881533.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 13037 13267 . + . ID=gene-LDO38_RS15720;Name=LDO38_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15720 NZ_CAJZAL010000138.1 GeneMarkS-2+ CDS 13037 13267 . + 0 ID=cds-WP_162486632.1;Parent=gene-LDO38_RS15720;Dbxref=GenBank:WP_162486632.1;Name=WP_162486632.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS15720;product=hypothetical protein;protein_id=WP_162486632.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 13390 14922 . + . ID=gene-LDO38_RS15725;Name=LDO38_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15725;old_locus_tag=BVI2075_370012 NZ_CAJZAL010000138.1 Protein Homology CDS 13390 14922 . + 0 ID=cds-WP_059458422.1;Parent=gene-LDO38_RS15725;Dbxref=GenBank:WP_059458422.1;Name=WP_059458422.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399386.1;locus_tag=LDO38_RS15725;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_059458422.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 15052 16005 . - . ID=gene-LDO38_RS15730;Name=LDO38_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15730;old_locus_tag=BVI2075_370013 NZ_CAJZAL010000138.1 Protein Homology CDS 15052 16005 . - 0 ID=cds-WP_014724610.1;Parent=gene-LDO38_RS15730;Dbxref=GenBank:WP_014724610.1;Name=WP_014724610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482942.1;locus_tag=LDO38_RS15730;product=transposase;protein_id=WP_014724610.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 16321 16746 . - . ID=gene-LDO38_RS15735;Name=LDO38_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15735;old_locus_tag=BVI2075_370015 NZ_CAJZAL010000138.1 GeneMarkS-2+ CDS 16321 16746 . - 0 ID=cds-WP_124260008.1;Parent=gene-LDO38_RS15735;Dbxref=GenBank:WP_124260008.1;Name=WP_124260008.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS15735;product=hypothetical protein;protein_id=WP_124260008.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 17185 18453 . - . ID=gene-LDO38_RS15740;Name=LDO38_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15740;old_locus_tag=BVI2075_370017 NZ_CAJZAL010000138.1 Protein Homology CDS 17185 18453 . - 0 ID=cds-WP_011881528.1;Parent=gene-LDO38_RS15740;Dbxref=GenBank:WP_011881528.1;Name=WP_011881528.1;Ontology_term=GO:0016987;gbkey=CDS;go_function=sigma factor activity|0016987||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548203.1;locus_tag=LDO38_RS15740;product=RNA polymerase sigma factor;protein_id=WP_011881528.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 18893 19315 . - . ID=gene-LDO38_RS15745;Name=LDO38_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15745;old_locus_tag=BVI2075_370018 NZ_CAJZAL010000138.1 Protein Homology CDS 18893 19315 . - 0 ID=cds-WP_011881527.1;Parent=gene-LDO38_RS15745;Dbxref=GenBank:WP_011881527.1;Name=WP_011881527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660448.1;locus_tag=LDO38_RS15745;product=YciI family protein;protein_id=WP_011881527.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 19441 19794 . - . ID=gene-LDO38_RS15750;Name=LDO38_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15750;old_locus_tag=BVI2075_370019 NZ_CAJZAL010000138.1 Protein Homology CDS 19441 19794 . - 0 ID=cds-WP_011881526.1;Parent=gene-LDO38_RS15750;Dbxref=GenBank:WP_011881526.1;Name=WP_011881526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365581.1;locus_tag=LDO38_RS15750;product=YciI family protein;protein_id=WP_011881526.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 20529 20915 . + . ID=gene-LDO38_RS15755;Name=LDO38_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15755;old_locus_tag=BVI2075_370021 NZ_CAJZAL010000138.1 Protein Homology CDS 20529 20915 . + 0 ID=cds-WP_045578195.1;Parent=gene-LDO38_RS15755;Dbxref=GenBank:WP_045578195.1;Name=WP_045578195.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355880.1;locus_tag=LDO38_RS15755;product=DUF883 family protein;protein_id=WP_045578195.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 20968 21552 . + . ID=gene-LDO38_RS15760;Name=LDO38_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15760;old_locus_tag=BVI2075_370022 NZ_CAJZAL010000138.1 Protein Homology CDS 20968 21552 . + 0 ID=cds-WP_046424621.1;Parent=gene-LDO38_RS15760;Dbxref=GenBank:WP_046424621.1;Name=WP_046424621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885032.1;locus_tag=LDO38_RS15760;product=BPSL1445 family SYLF domain-containing lipoprotein;protein_id=WP_046424621.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 21782 22834 . + . ID=gene-LDO38_RS15765;Name=LDO38_RS15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15765;old_locus_tag=BVI2075_370023 NZ_CAJZAL010000138.1 Protein Homology CDS 21782 22834 . + 0 ID=cds-WP_011881522.1;Parent=gene-LDO38_RS15765;Dbxref=GenBank:WP_011881522.1;Name=WP_011881522.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487821.1;locus_tag=LDO38_RS15765;product=AI-2E family transporter;protein_id=WP_011881522.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 23185 24201 . - . ID=gene-LDO38_RS15770;Name=LDO38_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15770;old_locus_tag=BVI2075_370025 NZ_CAJZAL010000138.1 Protein Homology CDS 23185 24201 . - 0 ID=cds-WP_014724605.1;Parent=gene-LDO38_RS15770;Dbxref=GenBank:WP_014724605.1;Name=WP_014724605.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255233.1;locus_tag=LDO38_RS15770;product=NADP-dependent oxidoreductase;protein_id=WP_014724605.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 24237 25025 . - . ID=gene-LDO38_RS15775;Name=LDO38_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15775;old_locus_tag=BVI2075_370026 NZ_CAJZAL010000138.1 Protein Homology CDS 24237 25025 . - 0 ID=cds-WP_014724604.1;Parent=gene-LDO38_RS15775;Dbxref=GenBank:WP_014724604.1;Name=WP_014724604.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089074.1;locus_tag=LDO38_RS15775;product=SDR family oxidoreductase;protein_id=WP_014724604.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 25170 25433 . - . ID=gene-LDO38_RS15780;Name=LDO38_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15780 NZ_CAJZAL010000138.1 GeneMarkS-2+ CDS 25170 25433 . - 0 ID=cds-WP_069246546.1;Parent=gene-LDO38_RS15780;Dbxref=GenBank:WP_069246546.1;Name=WP_069246546.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS15780;product=hypothetical protein;protein_id=WP_069246546.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 25562 26149 . - . ID=gene-LDO38_RS15785;Name=LDO38_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15785;old_locus_tag=BVI2075_370027 NZ_CAJZAL010000138.1 Protein Homology CDS 25562 26149 . - 0 ID=cds-WP_059895573.1;Parent=gene-LDO38_RS15785;Dbxref=GenBank:WP_059895573.1;Name=WP_059895573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881519.1;locus_tag=LDO38_RS15785;product=phosphatase PAP2 family protein;protein_id=WP_059895573.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 26231 27547 . - . ID=gene-LDO38_RS15790;Name=LDO38_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15790;old_locus_tag=BVI2075_370028 NZ_CAJZAL010000138.1 Protein Homology CDS 26231 27547 . - 0 ID=cds-WP_069246547.1;Parent=gene-LDO38_RS15790;Dbxref=GenBank:WP_069246547.1;Name=WP_069246547.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724602.1;locus_tag=LDO38_RS15790;product=Nramp family divalent metal transporter;protein_id=WP_069246547.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 27602 28558 . - . ID=gene-LDO38_RS15795;Name=LDO38_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15795;old_locus_tag=BVI2075_370029 NZ_CAJZAL010000138.1 Protein Homology CDS 27602 28558 . - 0 ID=cds-WP_185499743.1;Parent=gene-LDO38_RS15795;Dbxref=GenBank:WP_185499743.1;Name=WP_185499743.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724601.1;locus_tag=LDO38_RS15795;product=helix-turn-helix domain-containing protein;protein_id=WP_185499743.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 28920 29840 . + . ID=gene-LDO38_RS15800;Name=LDO38_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15800;old_locus_tag=BVI2075_370030 NZ_CAJZAL010000138.1 Protein Homology CDS 28920 29840 . + 0 ID=cds-WP_014724599.1;Parent=gene-LDO38_RS15800;Dbxref=GenBank:WP_014724599.1;Name=WP_014724599.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724599.1;locus_tag=LDO38_RS15800;product=LysR family transcriptional regulator;protein_id=WP_014724599.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 30133 30534 . + . ID=gene-LDO38_RS15805;Name=LDO38_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15805;old_locus_tag=BVI2075_370031 NZ_CAJZAL010000138.1 Protein Homology CDS 30133 30534 . + 0 ID=cds-WP_014724598.1;Parent=gene-LDO38_RS15805;Dbxref=GenBank:WP_014724598.1;Name=WP_014724598.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548217.1;locus_tag=LDO38_RS15805;product=OsmC family protein;protein_id=WP_014724598.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 30701 31582 . - . ID=gene-LDO38_RS15810;Name=LDO38_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15810;old_locus_tag=BVI2075_370032 NZ_CAJZAL010000138.1 Protein Homology CDS 30701 31582 . - 0 ID=cds-WP_069246548.1;Parent=gene-LDO38_RS15810;Dbxref=GenBank:WP_069246548.1;Name=WP_069246548.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753361.1;locus_tag=LDO38_RS15810;product=Dyp-type peroxidase;protein_id=WP_069246548.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 32092 33954 . + . ID=gene-LDO38_RS15815;Name=LDO38_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15815;old_locus_tag=BVI2075_370033 NZ_CAJZAL010000138.1 Protein Homology CDS 32092 33954 . + 0 ID=cds-WP_059462391.1;Parent=gene-LDO38_RS15815;Dbxref=GenBank:WP_059462391.1;Name=WP_059462391.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881513.1;locus_tag=LDO38_RS15815;product=ABC transporter ATP-binding protein;protein_id=WP_059462391.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 34092 34805 . + . ID=gene-LDO38_RS15820;Name=LDO38_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15820;old_locus_tag=BVI2075_370034 NZ_CAJZAL010000138.1 Protein Homology CDS 34092 34805 . + 0 ID=cds-WP_011881512.1;Parent=gene-LDO38_RS15820;Dbxref=GenBank:WP_011881512.1;Name=WP_011881512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881512.1;locus_tag=LDO38_RS15820;product=riboflavin synthase;protein_id=WP_011881512.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 34887 36128 . - . ID=gene-LDO38_RS15825;Name=LDO38_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15825;old_locus_tag=BVI2075_370035 NZ_CAJZAL010000138.1 Protein Homology CDS 34887 36128 . - 0 ID=cds-WP_014724596.1;Parent=gene-LDO38_RS15825;Dbxref=GenBank:WP_014724596.1;Name=WP_014724596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487801.1;locus_tag=LDO38_RS15825;product=voltage-gated chloride channel family protein;protein_id=WP_014724596.1;transl_table=11 NZ_CAJZAL010000138.1 cmsearch riboswitch 36209 36314 . - . ID=id-NZ_CAJZAL010000138.1:36209..36314;Dbxref=RFAM:RF01734;Note=Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride%3B They are found in a wide variety of bacteria and archaea;bound_moiety=fluoride;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAL010000138.1 RefSeq gene 36384 37403 . - . ID=gene-LDO38_RS15830;Name=LDO38_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15830;old_locus_tag=BVI2075_370036 NZ_CAJZAL010000138.1 Protein Homology CDS 36384 37403 . - 0 ID=cds-WP_011881510.1;Parent=gene-LDO38_RS15830;Dbxref=GenBank:WP_011881510.1;Name=WP_011881510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479514.1;locus_tag=LDO38_RS15830;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=WP_011881510.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 37400 39958 . - . ID=gene-LDO38_RS15835;Name=LDO38_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15835;old_locus_tag=BVI2075_370037 NZ_CAJZAL010000138.1 Protein Homology CDS 37400 39958 . - 0 ID=cds-WP_069246549.1;Parent=gene-LDO38_RS15835;Dbxref=GenBank:WP_069246549.1;Name=WP_069246549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724594.1;locus_tag=LDO38_RS15835;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_069246549.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 39955 40659 . - . ID=gene-LDO38_RS15840;Name=LDO38_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15840;old_locus_tag=BVI2075_370038 NZ_CAJZAL010000138.1 Protein Homology CDS 39955 40659 . - 0 ID=cds-WP_041494270.1;Parent=gene-LDO38_RS15840;Dbxref=GenBank:WP_041494270.1;Name=WP_041494270.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398022.1;locus_tag=LDO38_RS15840;product=chemotaxis protein CheW;protein_id=WP_041494270.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 40705 42216 . - . ID=gene-LDO38_RS15845;Name=LDO38_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15845;old_locus_tag=BVI2075_370039 NZ_CAJZAL010000138.1 Protein Homology CDS 40705 42216 . - 0 ID=cds-WP_224056518.1;Parent=gene-LDO38_RS15845;Dbxref=GenBank:WP_224056518.1;Name=WP_224056518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724592.1;locus_tag=LDO38_RS15845;product=CheR family methyltransferase;protein_id=WP_224056518.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 42213 42725 . - . ID=gene-LDO38_RS15850;Name=LDO38_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15850;old_locus_tag=BVI2075_370040 NZ_CAJZAL010000138.1 Protein Homology CDS 42213 42725 . - 0 ID=cds-WP_059567464.1;Parent=gene-LDO38_RS15850;Dbxref=GenBank:WP_059567464.1;Name=WP_059567464.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724591.1;locus_tag=LDO38_RS15850;product=chemotaxis protein CheW;protein_id=WP_059567464.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 42722 44398 . - . ID=gene-LDO38_RS15855;Name=LDO38_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15855;old_locus_tag=BVI2075_370041 NZ_CAJZAL010000138.1 Protein Homology CDS 42722 44398 . - 0 ID=cds-WP_045578201.1;Parent=gene-LDO38_RS15855;Dbxref=GenBank:WP_045578201.1;Name=WP_045578201.1;Ontology_term=GO:0006935;gbkey=CDS;go_process=chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404210.1;locus_tag=LDO38_RS15855;product=methyl-accepting chemotaxis protein;protein_id=WP_045578201.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 44515 45606 . - . ID=gene-LDO38_RS15860;Name=LDO38_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15860;old_locus_tag=BVI2075_370042 NZ_CAJZAL010000138.1 Protein Homology CDS 44515 45606 . - 0 ID=cds-WP_011881504.1;Parent=gene-LDO38_RS15860;Dbxref=GenBank:WP_011881504.1;Name=WP_011881504.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493172.1;locus_tag=LDO38_RS15860;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_011881504.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 46190 47773 . - . ID=gene-LDO38_RS15865;Name=LDO38_RS15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15865;old_locus_tag=BVI2075_370045 NZ_CAJZAL010000138.1 Protein Homology CDS 46190 47773 . - 0 ID=cds-WP_059558917.1;Parent=gene-LDO38_RS15865;Dbxref=GenBank:WP_059558917.1;Name=WP_059558917.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365547.1;locus_tag=LDO38_RS15865;product=Na+/H+ antiporter;protein_id=WP_059558917.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 48082 49515 . - . ID=gene-LDO38_RS15870;Name=LDO38_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15870;old_locus_tag=BVI2075_370046 NZ_CAJZAL010000138.1 Protein Homology CDS 48082 49515 . - 0 ID=cds-WP_011881502.1;Parent=gene-LDO38_RS15870;Dbxref=GenBank:WP_011881502.1;Name=WP_011881502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330254.1;locus_tag=LDO38_RS15870;product=aldehyde dehydrogenase family protein;protein_id=WP_011881502.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 49544 51184 . - . ID=gene-LDO38_RS15875;Name=LDO38_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15875;old_locus_tag=BVI2075_370047 NZ_CAJZAL010000138.1 Protein Homology CDS 49544 51184 . - 0 ID=cds-WP_059463465.1;Parent=gene-LDO38_RS15875;Dbxref=GenBank:WP_059463465.1;Name=WP_059463465.1;Ontology_term=GO:0000287,GO:0003824,GO:0030976;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009978184.1;locus_tag=LDO38_RS15875;product=acetolactate synthase large subunit;protein_id=WP_059463465.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 51562 51879 . + . ID=gene-LDO38_RS15880;Name=LDO38_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15880;old_locus_tag=BVI2075_370049 NZ_CAJZAL010000138.1 Protein Homology CDS 51562 51879 . + 0 ID=cds-WP_330995553.1;Parent=gene-LDO38_RS15880;Dbxref=GenBank:WP_330995553.1;Name=WP_330995553.1;Ontology_term=GO:0008219,GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724585.1;locus_tag=LDO38_RS15880;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_330995553.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 51883 52182 . + . ID=gene-LDO38_RS15885;Name=LDO38_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15885;old_locus_tag=BVI2075_370050 NZ_CAJZAL010000138.1 Protein Homology CDS 51883 52182 . + 0 ID=cds-WP_011881499.1;Parent=gene-LDO38_RS15885;Dbxref=GenBank:WP_011881499.1;Name=WP_011881499.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089041.1;locus_tag=LDO38_RS15885;product=addiction module antidote protein;protein_id=WP_011881499.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 52274 53560 . - . ID=gene-LDO38_RS15890;Name=LDO38_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15890;old_locus_tag=BVI2075_370051 NZ_CAJZAL010000138.1 Protein Homology CDS 52274 53560 . - 0 ID=cds-WP_014724584.1;Parent=gene-LDO38_RS15890;Dbxref=GenBank:WP_014724584.1;Name=WP_014724584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338513.1;locus_tag=LDO38_RS15890;product=DUF445 domain-containing protein;protein_id=WP_014724584.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 53749 54969 . - . ID=gene-LDO38_RS15895;Name=andAa;gbkey=Gene;gene=andAa;gene_biotype=protein_coding;locus_tag=LDO38_RS15895;old_locus_tag=BVI2075_370052 NZ_CAJZAL010000138.1 Protein Homology CDS 53749 54969 . - 0 ID=cds-WP_059462396.1;Parent=gene-LDO38_RS15895;Dbxref=GenBank:WP_059462396.1;Name=WP_059462396.1;Ontology_term=GO:0009056,GO:0008860;gbkey=CDS;gene=andAa;go_function=ferredoxin-NAD+ reductase activity|0008860||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411378.1;locus_tag=LDO38_RS15895;product=anthranilate 1%2C2-dioxygenase system ferredoxin--NAD(+) reductase;protein_id=WP_059462396.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 54959 55285 . - . ID=gene-LDO38_RS15900;Name=andAb;gbkey=Gene;gene=andAb;gene_biotype=protein_coding;locus_tag=LDO38_RS15900;old_locus_tag=BVI2075_370053 NZ_CAJZAL010000138.1 Protein Homology CDS 54959 55285 . - 0 ID=cds-WP_011881496.1;Parent=gene-LDO38_RS15900;Dbxref=GenBank:WP_011881496.1;Name=WP_011881496.1;Ontology_term=GO:0009056,GO:0051537;gbkey=CDS;gene=andAb;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355916.1;locus_tag=LDO38_RS15900;product=anthranilate 1%2C2-dioxygenase ferredoxin subunit AndAb;protein_id=WP_011881496.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 55312 55797 . - . ID=gene-LDO38_RS15905;Name=andAd;gbkey=Gene;gene=andAd;gene_biotype=protein_coding;locus_tag=LDO38_RS15905;old_locus_tag=BVI2075_370054 NZ_CAJZAL010000138.1 Protein Homology CDS 55312 55797 . - 0 ID=cds-WP_034194948.1;Parent=gene-LDO38_RS15905;Dbxref=GenBank:WP_034194948.1;Name=WP_034194948.1;Ontology_term=GO:0009056,GO:0018618;gbkey=CDS;gene=andAd;go_function=anthranilate 1%2C2-dioxygenase (deaminating%2C decarboxylating) activity|0018618||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881495.1;locus_tag=LDO38_RS15905;product=anthranilate 1%2C2-dioxygenase small subunit AndAd;protein_id=WP_034194948.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 55815 57086 . - . ID=gene-LDO38_RS15910;Name=andAc;gbkey=Gene;gene=andAc;gene_biotype=protein_coding;locus_tag=LDO38_RS15910;old_locus_tag=BVI2075_370055 NZ_CAJZAL010000138.1 Protein Homology CDS 55815 57086 . - 0 ID=cds-WP_014724582.1;Parent=gene-LDO38_RS15910;Dbxref=GenBank:WP_014724582.1;Name=WP_014724582.1;Ontology_term=GO:0009056,GO:0018618;gbkey=CDS;gene=andAc;go_function=anthranilate 1%2C2-dioxygenase (deaminating%2C decarboxylating) activity|0018618||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412648.1;locus_tag=LDO38_RS15910;product=anthranilate 1%2C2-dioxygenase large subunit AndAc;protein_id=WP_014724582.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 57297 58253 . + . ID=gene-LDO38_RS15915;Name=andR;gbkey=Gene;gene=andR;gene_biotype=protein_coding;locus_tag=LDO38_RS15915;old_locus_tag=BVI2075_370057 NZ_CAJZAL010000138.1 Protein Homology CDS 57297 58253 . + 0 ID=cds-WP_034194947.1;Parent=gene-LDO38_RS15915;Dbxref=GenBank:WP_034194947.1;Name=WP_034194947.1;Ontology_term=GO:0009056,GO:0003700,GO:0043565;gbkey=CDS;gene=andR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338516.1;locus_tag=LDO38_RS15915;product=anthranilate 1%2C2-dioxygenase regulatory protein AndR;protein_id=WP_034194947.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 58508 59398 . - . ID=gene-LDO38_RS15920;Name=LDO38_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15920;old_locus_tag=BVI2075_370059 NZ_CAJZAL010000138.1 Protein Homology CDS 58508 59398 . - 0 ID=cds-WP_069246551.1;Parent=gene-LDO38_RS15920;Dbxref=GenBank:WP_069246551.1;Name=WP_069246551.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881492.1;locus_tag=LDO38_RS15920;product=LysR family transcriptional regulator;protein_id=WP_069246551.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 59490 60623 . + . ID=gene-LDO38_RS15925;Name=LDO38_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15925;old_locus_tag=BVI2075_370060 NZ_CAJZAL010000138.1 Protein Homology CDS 59490 60623 . + 0 ID=cds-WP_059462398.1;Parent=gene-LDO38_RS15925;Dbxref=GenBank:WP_059462398.1;Name=WP_059462398.1;Ontology_term=GO:0018849,GO:0018850,GO:0030145;gbkey=CDS;go_function=muconate cycloisomerase activity|0018849||IEA,chloromuconate cycloisomerase activity|0018850||IEA,manganese ion binding|0030145||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853729.1;locus_tag=LDO38_RS15925;product=muconate/chloromuconate family cycloisomerase;protein_id=WP_059462398.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 60675 61577 . + . ID=gene-LDO38_RS15930;Name=catA;gbkey=Gene;gene=catA;gene_biotype=protein_coding;locus_tag=LDO38_RS15930;old_locus_tag=BVI2075_370061 NZ_CAJZAL010000138.1 Protein Homology CDS 60675 61577 . + 0 ID=cds-WP_034194945.1;Parent=gene-LDO38_RS15930;Dbxref=GenBank:WP_034194945.1;Name=WP_034194945.1;Ontology_term=GO:0019615,GO:0005506,GO:0018576;gbkey=CDS;gene=catA;go_function=iron ion binding|0005506||IEA,catechol 1%2C2-dioxygenase activity|0018576||IEA;go_process=catechol catabolic process%2C ortho-cleavage|0019615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365533.1;locus_tag=LDO38_RS15930;product=catechol 1%2C2-dioxygenase;protein_id=WP_034194945.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 61621 61911 . + . ID=gene-LDO38_RS15935;Name=catC;gbkey=Gene;gene=catC;gene_biotype=protein_coding;locus_tag=LDO38_RS15935;old_locus_tag=BVI2075_370062 NZ_CAJZAL010000138.1 Protein Homology CDS 61621 61911 . + 0 ID=cds-WP_011881489.1;Parent=gene-LDO38_RS15935;Dbxref=GenBank:WP_011881489.1;Name=WP_011881489.1;Ontology_term=GO:0042952,GO:0016159;gbkey=CDS;gene=catC;go_function=muconolactone delta-isomerase activity|0016159||IEA;go_process=beta-ketoadipate pathway|0042952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881489.1;locus_tag=LDO38_RS15935;product=muconolactone Delta-isomerase;protein_id=WP_011881489.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 62006 62860 . - . ID=gene-LDO38_RS15940;Name=LDO38_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15940;old_locus_tag=BVI2075_370063 NZ_CAJZAL010000138.1 Protein Homology CDS 62006 62860 . - 0 ID=cds-WP_069246552.1;Parent=gene-LDO38_RS15940;Dbxref=GenBank:WP_069246552.1;Name=WP_069246552.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881488.1;locus_tag=LDO38_RS15940;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_069246552.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 62947 63840 . + . ID=gene-LDO38_RS15945;Name=LDO38_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15945;old_locus_tag=BVI2075_370064 NZ_CAJZAL010000138.1 Protein Homology CDS 62947 63840 . + 0 ID=cds-WP_059462399.1;Parent=gene-LDO38_RS15945;Dbxref=GenBank:WP_059462399.1;Name=WP_059462399.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484342.1;locus_tag=LDO38_RS15945;product=LysR family transcriptional regulator;protein_id=WP_059462399.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 63968 64372 . + . ID=gene-LDO38_RS15950;Name=LDO38_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15950;old_locus_tag=BVI2075_370065 NZ_CAJZAL010000138.1 Protein Homology CDS 63968 64372 . + 0 ID=cds-WP_059462400.1;Parent=gene-LDO38_RS15950;Dbxref=GenBank:WP_059462400.1;Name=WP_059462400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881486.1;locus_tag=LDO38_RS15950;product=DUF2471 family protein;protein_id=WP_059462400.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 64682 66715 . - . ID=gene-LDO38_RS15955;Name=LDO38_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15955;old_locus_tag=BVI2075_370067 NZ_CAJZAL010000138.1 Protein Homology CDS 64682 66715 . - 0 ID=cds-WP_059462401.1;Parent=gene-LDO38_RS15955;Dbxref=GenBank:WP_059462401.1;Name=WP_059462401.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004544654.1;locus_tag=LDO38_RS15955;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_059462401.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 66792 67877 . + . ID=gene-LDO38_RS15960;Name=LDO38_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15960;old_locus_tag=BVI2075_370068 NZ_CAJZAL010000138.1 Protein Homology CDS 66792 67877 . + 0 ID=cds-WP_069246553.1;Parent=gene-LDO38_RS15960;Dbxref=GenBank:WP_069246553.1;Name=WP_069246553.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496027.1;locus_tag=LDO38_RS15960;product=AraC family transcriptional regulator;protein_id=WP_069246553.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 68225 68653 . - . ID=gene-LDO38_RS15970;Name=LDO38_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15970;old_locus_tag=BVI2075_370069 NZ_CAJZAL010000138.1 Protein Homology CDS 68225 68653 . - 0 ID=cds-WP_011881483.1;Parent=gene-LDO38_RS15970;Dbxref=GenBank:WP_011881483.1;Name=WP_011881483.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338528.1;locus_tag=LDO38_RS15970;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_011881483.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 68764 69663 . + . ID=gene-LDO38_RS15975;Name=LDO38_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15975;old_locus_tag=BVI2075_370070 NZ_CAJZAL010000138.1 Protein Homology CDS 68764 69663 . + 0 ID=cds-WP_011881482.1;Parent=gene-LDO38_RS15975;Dbxref=GenBank:WP_011881482.1;Name=WP_011881482.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881482.1;locus_tag=LDO38_RS15975;product=LysR family transcriptional regulator;protein_id=WP_011881482.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 69780 70211 . + . ID=gene-LDO38_RS15980;Name=LDO38_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15980;old_locus_tag=BVI2075_370071 NZ_CAJZAL010000138.1 Protein Homology CDS 69780 70211 . + 0 ID=cds-WP_224056519.1;Parent=gene-LDO38_RS15980;Dbxref=GenBank:WP_224056519.1;Name=WP_224056519.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496031.1;locus_tag=LDO38_RS15980;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_224056519.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 70280 71371 . + . ID=gene-LDO38_RS15985;Name=LDO38_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15985;old_locus_tag=BVI2075_370072 NZ_CAJZAL010000138.1 Protein Homology CDS 70280 71371 . + 0 ID=cds-WP_043292368.1;Parent=gene-LDO38_RS15985;Dbxref=GenBank:WP_043292368.1;Name=WP_043292368.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750286.1;locus_tag=LDO38_RS15985;product=HlyD family secretion protein;protein_id=WP_043292368.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 71385 72959 . + . ID=gene-LDO38_RS15990;Name=LDO38_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15990;old_locus_tag=BVI2075_370073 NZ_CAJZAL010000138.1 Protein Homology CDS 71385 72959 . + 0 ID=cds-WP_011881479.1;Parent=gene-LDO38_RS15990;Dbxref=GenBank:WP_011881479.1;Name=WP_011881479.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338532.1;locus_tag=LDO38_RS15990;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_011881479.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 72975 74423 . + . ID=gene-LDO38_RS15995;Name=LDO38_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS15995;old_locus_tag=BVI2075_370074 NZ_CAJZAL010000138.1 Protein Homology CDS 72975 74423 . + 0 ID=cds-WP_059889619.1;Parent=gene-LDO38_RS15995;Dbxref=GenBank:WP_059889619.1;Name=WP_059889619.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724570.1;locus_tag=LDO38_RS15995;product=efflux transporter outer membrane subunit;protein_id=WP_059889619.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 74495 74905 . - . ID=gene-LDO38_RS16000;Name=LDO38_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16000;old_locus_tag=BVI2075_370075 NZ_CAJZAL010000138.1 Protein Homology CDS 74495 74905 . - 0 ID=cds-WP_011881477.1;Parent=gene-LDO38_RS16000;Dbxref=GenBank:WP_011881477.1;Name=WP_011881477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365505.1;locus_tag=LDO38_RS16000;product=TIGR02594 family protein;protein_id=WP_011881477.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 75145 76962 . - . ID=gene-LDO38_RS16005;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LDO38_RS16005;old_locus_tag=BVI2075_370076 NZ_CAJZAL010000138.1 Protein Homology CDS 75145 76962 . - 0 ID=cds-WP_059462402.1;Parent=gene-LDO38_RS16005;Dbxref=GenBank:WP_059462402.1;Name=WP_059462402.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004549145.1;locus_tag=LDO38_RS16005;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_059462402.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 77978 79195 . + . ID=gene-LDO38_RS16010;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=LDO38_RS16010;old_locus_tag=BVI2075_370078 NZ_CAJZAL010000138.1 Protein Homology CDS 77978 79195 . + 0 ID=cds-WP_011881474.1;Parent=gene-LDO38_RS16010;Dbxref=GenBank:WP_011881474.1;Name=WP_011881474.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476298.1;locus_tag=LDO38_RS16010;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_011881474.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 79382 80062 . - . ID=gene-LDO38_RS16015;Name=LDO38_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16015;old_locus_tag=BVI2075_370079 NZ_CAJZAL010000138.1 Protein Homology CDS 79382 80062 . - 0 ID=cds-WP_011881473.1;Parent=gene-LDO38_RS16015;Dbxref=GenBank:WP_011881473.1;Name=WP_011881473.1;Ontology_term=GO:0015288,GO:0042834;gbkey=CDS;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338547.1;locus_tag=LDO38_RS16015;product=OmpA/MotB family protein;protein_id=WP_011881473.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 80081 80845 . - . ID=gene-LDO38_RS16020;Name=LDO38_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16020;old_locus_tag=BVI2075_370080 NZ_CAJZAL010000138.1 Protein Homology CDS 80081 80845 . - 0 ID=cds-WP_011881472.1;Parent=gene-LDO38_RS16020;Dbxref=GenBank:WP_011881472.1;Name=WP_011881472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397961.1;locus_tag=LDO38_RS16020;product=flagellar motor protein;protein_id=WP_011881472.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 80868 82112 . - . ID=gene-LDO38_RS16025;Name=LDO38_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16025;old_locus_tag=BVI2075_370081 NZ_CAJZAL010000138.1 Protein Homology CDS 80868 82112 . - 0 ID=cds-WP_014724565.1;Parent=gene-LDO38_RS16025;Dbxref=GenBank:WP_014724565.1;Name=WP_014724565.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338548.1;locus_tag=LDO38_RS16025;product=Crp/Fnr family transcriptional regulator;protein_id=WP_014724565.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 82593 83573 . + . ID=gene-LDO38_RS16030;Name=LDO38_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16030;old_locus_tag=BVI2075_370083 NZ_CAJZAL010000138.1 Protein Homology CDS 82593 83573 . + 0 ID=cds-WP_014724562.1;Parent=gene-LDO38_RS16030;Dbxref=GenBank:WP_014724562.1;Name=WP_014724562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724562.1;locus_tag=LDO38_RS16030;product=hypothetical protein;protein_id=WP_014724562.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 83613 85307 . - . ID=gene-LDO38_RS16035;Name=LDO38_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16035;old_locus_tag=BVI2075_370084 NZ_CAJZAL010000138.1 Protein Homology CDS 83613 85307 . - 0 ID=cds-WP_059463469.1;Parent=gene-LDO38_RS16035;Dbxref=GenBank:WP_059463469.1;Name=WP_059463469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900170.1;locus_tag=LDO38_RS16035;product=bacteriophage N4 adsorption protein A;protein_id=WP_059463469.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 85304 87262 . - . ID=gene-LDO38_RS16040;Name=LDO38_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16040;old_locus_tag=BVI2075_370085 NZ_CAJZAL010000138.1 Protein Homology CDS 85304 87262 . - 0 ID=cds-WP_249182214.1;Parent=gene-LDO38_RS16040;Dbxref=GenBank:WP_249182214.1;Name=WP_249182214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724560.1;locus_tag=LDO38_RS16040;product=glycosyl transferase family protein;protein_id=WP_249182214.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 88080 88463 . + . ID=gene-LDO38_RS16045;Name=LDO38_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16045;old_locus_tag=BVI2075_370087 NZ_CAJZAL010000138.1 GeneMarkS-2+ CDS 88080 88463 . + 0 ID=cds-WP_224056520.1;Parent=gene-LDO38_RS16045;Dbxref=GenBank:WP_224056520.1;Name=WP_224056520.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS16045;product=hypothetical protein;protein_id=WP_224056520.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 88476 90119 . + . ID=gene-LDO38_RS16050;Name=LDO38_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16050;old_locus_tag=BVI2075_370088 NZ_CAJZAL010000138.1 Protein Homology CDS 88476 90119 . + 0 ID=cds-WP_059462405.1;Parent=gene-LDO38_RS16050;Dbxref=GenBank:WP_059462405.1;Name=WP_059462405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759221.1;locus_tag=LDO38_RS16050;product=DUF2334 domain-containing protein;protein_id=WP_059462405.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 90223 91182 . + . ID=gene-LDO38_RS16055;Name=LDO38_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16055;old_locus_tag=BVI2075_370089 NZ_CAJZAL010000138.1 Protein Homology CDS 90223 91182 . + 0 ID=cds-WP_059567480.1;Parent=gene-LDO38_RS16055;Dbxref=GenBank:WP_059567480.1;Name=WP_059567480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724552.1;locus_tag=LDO38_RS16055;product=hypothetical protein;protein_id=WP_059567480.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 91503 92330 . - . ID=gene-LDO38_RS16060;Name=LDO38_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16060;old_locus_tag=BVI2075_370090 NZ_CAJZAL010000138.1 Protein Homology CDS 91503 92330 . - 0 ID=cds-WP_224056521.1;Parent=gene-LDO38_RS16060;Dbxref=GenBank:WP_224056521.1;Name=WP_224056521.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549089.1;locus_tag=LDO38_RS16060;product=class I SAM-dependent methyltransferase;protein_id=WP_224056521.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 92727 92960 . + . ID=gene-LDO38_RS16065;Name=LDO38_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16065;old_locus_tag=BVI2075_370092 NZ_CAJZAL010000138.1 Protein Homology CDS 92727 92960 . + 0 ID=cds-WP_014724550.1;Parent=gene-LDO38_RS16065;Dbxref=GenBank:WP_014724550.1;Name=WP_014724550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487081.1;locus_tag=LDO38_RS16065;product=hypothetical protein;protein_id=WP_014724550.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 92992 93792 . - . ID=gene-LDO38_RS16070;Name=LDO38_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16070;old_locus_tag=BVI2075_370093 NZ_CAJZAL010000138.1 Protein Homology CDS 92992 93792 . - 0 ID=cds-WP_014724549.1;Parent=gene-LDO38_RS16070;Dbxref=GenBank:WP_014724549.1;Name=WP_014724549.1;Ontology_term=GO:0004112;gbkey=CDS;go_function=cyclic-nucleotide phosphodiesterase activity|0004112||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336949.1;locus_tag=LDO38_RS16070;product=phosphodiesterase;protein_id=WP_014724549.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 94099 94437 . - . ID=gene-LDO38_RS16075;Name=LDO38_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16075;old_locus_tag=BVI2075_370094 NZ_CAJZAL010000138.1 Protein Homology CDS 94099 94437 . - 0 ID=cds-WP_059462408.1;Parent=gene-LDO38_RS16075;Dbxref=GenBank:WP_059462408.1;Name=WP_059462408.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013089.6;locus_tag=LDO38_RS16075;product=DMT family transporter;protein_id=WP_059462408.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 94709 95194 . - . ID=gene-LDO38_RS16080;Name=LDO38_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16080;old_locus_tag=BVI2075_370096 NZ_CAJZAL010000138.1 Protein Homology CDS 94709 95194 . - 0 ID=cds-WP_059889577.1;Parent=gene-LDO38_RS16080;Dbxref=GenBank:WP_059889577.1;Name=WP_059889577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338550.1;locus_tag=LDO38_RS16080;product=DUF3761 domain-containing protein;protein_id=WP_059889577.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 95256 95393 . - . ID=gene-LDO38_RS16085;Name=LDO38_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16085 NZ_CAJZAL010000138.1 Protein Homology CDS 95256 95393 . - 0 ID=cds-WP_014724546.1;Parent=gene-LDO38_RS16085;Dbxref=GenBank:WP_014724546.1;Name=WP_014724546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365487.1;locus_tag=LDO38_RS16085;product=HHHH-motif protein;protein_id=WP_014724546.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 95940 96635 . + . ID=gene-LDO38_RS16090;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=LDO38_RS16090;old_locus_tag=BVI2075_370097 NZ_CAJZAL010000138.1 Protein Homology CDS 95940 96635 . + 0 ID=cds-WP_011881456.1;Parent=gene-LDO38_RS16090;Dbxref=GenBank:WP_011881456.1;Name=WP_011881456.1;Ontology_term=GO:0006355,GO:0006547,GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-histidine metabolic process|0006547||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900192.1;locus_tag=LDO38_RS16090;product=histidine utilization repressor;protein_id=WP_011881456.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 96846 97199 . + . ID=gene-LDO38_RS16095;Name=LDO38_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16095;old_locus_tag=BVI2075_370098 NZ_CAJZAL010000138.1 Protein Homology CDS 96846 97199 . + 0 ID=cds-WP_224056522.1;Parent=gene-LDO38_RS16095;Dbxref=GenBank:WP_224056522.1;Name=WP_224056522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355985.1;locus_tag=LDO38_RS16095;product=hypothetical protein;protein_id=WP_224056522.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 97246 98049 . - . ID=gene-LDO38_RS16100;Name=LDO38_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16100;old_locus_tag=BVI2075_370099 NZ_CAJZAL010000138.1 Protein Homology CDS 97246 98049 . - 0 ID=cds-WP_014724543.1;Parent=gene-LDO38_RS16100;Dbxref=GenBank:WP_014724543.1;Name=WP_014724543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338560.1;locus_tag=LDO38_RS16100;product=alpha/beta fold hydrolase;protein_id=WP_014724543.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 98131 99048 . - . ID=gene-LDO38_RS16105;Name=LDO38_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16105;old_locus_tag=BVI2075_370100 NZ_CAJZAL010000138.1 Protein Homology CDS 98131 99048 . - 0 ID=cds-WP_011881453.1;Parent=gene-LDO38_RS16105;Dbxref=GenBank:WP_011881453.1;Name=WP_011881453.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355987.1;locus_tag=LDO38_RS16105;product=LysR family transcriptional regulator;protein_id=WP_011881453.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 99250 99495 . - . ID=gene-LDO38_RS16110;Name=LDO38_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16110;old_locus_tag=BVI2075_370101 NZ_CAJZAL010000138.1 Protein Homology CDS 99250 99495 . - 0 ID=cds-WP_011881452.1;Parent=gene-LDO38_RS16110;Dbxref=GenBank:WP_011881452.1;Name=WP_011881452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750807.1;locus_tag=LDO38_RS16110;product=DUF3717 domain-containing protein;protein_id=WP_011881452.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 99834 101369 . - . ID=gene-LDO38_RS16115;Name=LDO38_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16115;old_locus_tag=BVI2075_370102 NZ_CAJZAL010000138.1 Protein Homology CDS 99834 101369 . - 0 ID=cds-WP_059462411.1;Parent=gene-LDO38_RS16115;Dbxref=GenBank:WP_059462411.1;Name=WP_059462411.1;Ontology_term=GO:0006865;gbkey=CDS;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496062.1;locus_tag=LDO38_RS16115;product=amino acid permease;protein_id=WP_059462411.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 101888 103420 . + . ID=gene-LDO38_RS16120;Name=LDO38_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16120;old_locus_tag=BVI2075_370103 NZ_CAJZAL010000138.1 Protein Homology CDS 101888 103420 . + 0 ID=cds-WP_059895602.1;Parent=gene-LDO38_RS16120;Dbxref=GenBank:WP_059895602.1;Name=WP_059895602.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548291.1;locus_tag=LDO38_RS16120;product=GGDEF domain-containing protein;protein_id=WP_059895602.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 103559 104629 . + . ID=gene-LDO38_RS16125;Name=LDO38_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16125;old_locus_tag=BVI2075_370104 NZ_CAJZAL010000138.1 Protein Homology CDS 103559 104629 . + 0 ID=cds-WP_124260096.1;Parent=gene-LDO38_RS16125;Dbxref=GenBank:WP_124260096.1;Name=WP_124260096.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202241.1;locus_tag=LDO38_RS16125;product=FUSC family protein;protein_id=WP_124260096.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 104959 106296 . + . ID=gene-LDO38_RS16130;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=LDO38_RS16130;old_locus_tag=BVI2075_370105 NZ_CAJZAL010000138.1 Protein Homology CDS 104959 106296 . + 0 ID=cds-WP_014724539.1;Parent=gene-LDO38_RS16130;Dbxref=GenBank:WP_014724539.1;Name=WP_014724539.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881448.1;locus_tag=LDO38_RS16130;product=argininosuccinate synthase;protein_id=WP_014724539.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 106566 107573 . - . ID=gene-LDO38_RS16135;Name=LDO38_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16135;old_locus_tag=BVI2075_370106 NZ_CAJZAL010000138.1 Protein Homology CDS 106566 107573 . - 0 ID=cds-WP_014724538.1;Parent=gene-LDO38_RS16135;Dbxref=GenBank:WP_014724538.1;Name=WP_014724538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724538.1;locus_tag=LDO38_RS16135;product=iron-containing redox enzyme family protein;protein_id=WP_014724538.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 107920 108126 . + . ID=gene-LDO38_RS16140;Name=LDO38_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16140;old_locus_tag=BVI2075_370107 NZ_CAJZAL010000138.1 Protein Homology CDS 107920 108126 . + 0 ID=cds-WP_224019383.1;Parent=gene-LDO38_RS16140;Dbxref=GenBank:WP_224019383.1;Name=WP_224019383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332137.1;locus_tag=LDO38_RS16140;product=hypothetical protein;protein_id=WP_224019383.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 108271 108450 . + . ID=gene-LDO38_RS16145;Name=LDO38_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16145;old_locus_tag=BVI2075_370108 NZ_CAJZAL010000138.1 Protein Homology CDS 108271 108450 . + 0 ID=cds-WP_034194930.1;Parent=gene-LDO38_RS16145;Dbxref=GenBank:WP_034194930.1;Name=WP_034194930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018437908.1;locus_tag=LDO38_RS16145;product=hypothetical protein;protein_id=WP_034194930.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 108527 109492 . + . ID=gene-LDO38_RS16150;Name=LDO38_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16150;old_locus_tag=BVI2075_370109 NZ_CAJZAL010000138.1 Protein Homology CDS 108527 109492 . + 0 ID=cds-WP_014724535.1;Parent=gene-LDO38_RS16150;Dbxref=GenBank:WP_014724535.1;Name=WP_014724535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018437909.1;locus_tag=LDO38_RS16150;product=iron-containing redox enzyme family protein;protein_id=WP_014724535.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 109503 110498 . + . ID=gene-LDO38_RS16155;Name=LDO38_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16155;old_locus_tag=BVI2075_370110 NZ_CAJZAL010000138.1 Protein Homology CDS 109503 110498 . + 0 ID=cds-WP_224056523.1;Parent=gene-LDO38_RS16155;Dbxref=GenBank:WP_224056523.1;Name=WP_224056523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724534.1;locus_tag=LDO38_RS16155;product=iron-containing redox enzyme family protein;protein_id=WP_224056523.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 110507 111994 . + . ID=gene-LDO38_RS16160;Name=LDO38_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16160;old_locus_tag=BVI2075_370111 NZ_CAJZAL010000138.1 Protein Homology CDS 110507 111994 . + 0 ID=cds-WP_059558942.1;Parent=gene-LDO38_RS16160;Dbxref=GenBank:WP_059558942.1;Name=WP_059558942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724533.1;locus_tag=LDO38_RS16160;product=hypothetical protein;protein_id=WP_059558942.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 112032 113528 . + . ID=gene-LDO38_RS16165;Name=LDO38_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16165;old_locus_tag=BVI2075_370112 NZ_CAJZAL010000138.1 Protein Homology CDS 112032 113528 . + 0 ID=cds-WP_045578225.1;Parent=gene-LDO38_RS16165;Dbxref=GenBank:WP_045578225.1;Name=WP_045578225.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724532.1;locus_tag=LDO38_RS16165;product=GMC family oxidoreductase;protein_id=WP_045578225.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 114580 115206 . + . ID=gene-LDO38_RS16170;Name=LDO38_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16170;old_locus_tag=BVI2075_370113 NZ_CAJZAL010000138.1 Protein Homology CDS 114580 115206 . + 0 ID=cds-WP_059453435.1;Parent=gene-LDO38_RS16170;Dbxref=GenBank:WP_059453435.1;Name=WP_059453435.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355998.1;locus_tag=LDO38_RS16170;product=LysE family translocator;protein_id=WP_059453435.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 115221 115982 . + . ID=gene-LDO38_RS16175;Name=LDO38_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16175;old_locus_tag=BVI2075_370114 NZ_CAJZAL010000138.1 Protein Homology CDS 115221 115982 . + 0 ID=cds-WP_080484444.1;Parent=gene-LDO38_RS16175;Dbxref=GenBank:WP_080484444.1;Name=WP_080484444.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766900.1;locus_tag=LDO38_RS16175;product=class I SAM-dependent methyltransferase;protein_id=WP_080484444.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 116147 117442 . + . ID=gene-LDO38_RS16180;Name=LDO38_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16180;old_locus_tag=BVI2075_370115 NZ_CAJZAL010000138.1 Protein Homology CDS 116147 117442 . + 0 ID=cds-WP_059895336.1;Parent=gene-LDO38_RS16180;Dbxref=GenBank:WP_059895336.1;Name=WP_059895336.1;Ontology_term=GO:0019346,GO:0016765,GO:0030170;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188263.1;locus_tag=LDO38_RS16180;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein;protein_id=WP_059895336.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 117506 117865 . - . ID=gene-LDO38_RS30555;Name=LDO38_RS30555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30555;old_locus_tag=BVI2075_370116 NZ_CAJZAL010000138.1 GeneMarkS-2+ CDS 117506 117865 . - 0 ID=cds-WP_226103003.1;Parent=gene-LDO38_RS30555;Dbxref=GenBank:WP_226103003.1;Name=WP_226103003.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30555;product=hypothetical protein;protein_id=WP_226103003.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 118004 118219 . + . ID=gene-LDO38_RS16185;Name=LDO38_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16185;old_locus_tag=BVI2075_370117 NZ_CAJZAL010000138.1 GeneMarkS-2+ CDS 118004 118219 . + 0 ID=cds-WP_046429202.1;Parent=gene-LDO38_RS16185;Dbxref=GenBank:WP_046429202.1;Name=WP_046429202.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS16185;product=hypothetical protein;protein_id=WP_046429202.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 118252 118539 . - . ID=gene-LDO38_RS16190;Name=LDO38_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16190 NZ_CAJZAL010000138.1 GeneMarkS-2+ CDS 118252 118539 . - 0 ID=cds-WP_124260097.1;Parent=gene-LDO38_RS16190;Dbxref=GenBank:WP_124260097.1;Name=WP_124260097.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS16190;product=hypothetical protein;protein_id=WP_124260097.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 118711 123712 . + . ID=gene-LDO38_RS16195;Name=LDO38_RS16195;end_range=123712,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16195;old_locus_tag=BVI2075_370119;partial=true NZ_CAJZAL010000138.1 Protein Homology CDS 118711 123712 . + 0 ID=cds-WP_224056524.1;Parent=gene-LDO38_RS16195;Dbxref=GenBank:WP_224056524.1;Name=WP_224056524.1;end_range=123712,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724527.1;locus_tag=LDO38_RS16195;partial=true;product=DUF4347 domain-containing protein;protein_id=WP_224056524.1;transl_table=11 NZ_CAJZAL010000138.1 RefSeq gene 123723 124104 . + . ID=gene-LDO38_RS16200;Name=LDO38_RS16200;end_range=124104,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16200;partial=true;start_range=.,123723 NZ_CAJZAL010000138.1 Protein Homology CDS 123723 124104 . + 0 ID=cds-WP_435520953.1;Parent=gene-LDO38_RS16200;Dbxref=GenBank:WP_435520953.1;Name=WP_435520953.1;end_range=124104,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724527.1;locus_tag=LDO38_RS16200;partial=true;product=hypothetical protein;protein_id=WP_435520953.1;start_range=.,123723;transl_table=11 ##sequence-region NZ_CAJZAL010000139.1 1 22052 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000139.1 RefSeq region 1 22052 . + . ID=NZ_CAJZAL010000139.1:1..22052;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_38 NZ_CAJZAL010000139.1 RefSeq gene 1 899 . + . ID=gene-LDO38_RS16205;Name=LDO38_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16205;old_locus_tag=BVI2075_380001;partial=true;start_range=.,1 NZ_CAJZAL010000139.1 Protein Homology CDS 1 899 . + 2 ID=cds-WP_224056527.1;Parent=gene-LDO38_RS16205;Dbxref=GenBank:WP_224056527.1;Name=WP_224056527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881740.1;locus_tag=LDO38_RS16205;partial=true;product=DUF2345 domain-containing protein;protein_id=WP_224056527.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000139.1 RefSeq gene 912 3065 . + . ID=gene-LDO38_RS16210;Name=LDO38_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16210;old_locus_tag=BVI2075_380002 NZ_CAJZAL010000139.1 Protein Homology CDS 912 3065 . + 0 ID=cds-WP_011881741.1;Parent=gene-LDO38_RS16210;Dbxref=GenBank:WP_011881741.1;Name=WP_011881741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881741.1;locus_tag=LDO38_RS16210;product=hypothetical protein;protein_id=WP_011881741.1;transl_table=11 NZ_CAJZAL010000139.1 RefSeq gene 3098 3916 . + . ID=gene-LDO38_RS16215;Name=LDO38_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16215;old_locus_tag=BVI2075_380004 NZ_CAJZAL010000139.1 GeneMarkS-2+ CDS 3098 3916 . + 0 ID=cds-WP_124260072.1;Parent=gene-LDO38_RS16215;Dbxref=GenBank:WP_124260072.1;Name=WP_124260072.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS16215;product=hypothetical protein;protein_id=WP_124260072.1;transl_table=11 NZ_CAJZAL010000139.1 RefSeq gene 3951 5111 . + . ID=gene-LDO38_RS16220;Name=LDO38_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16220;old_locus_tag=BVI2075_380005 NZ_CAJZAL010000139.1 Protein Homology CDS 3951 5111 . + 0 ID=cds-WP_011881744.1;Parent=gene-LDO38_RS16220;Dbxref=GenBank:WP_011881744.1;Name=WP_011881744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881744.1;locus_tag=LDO38_RS16220;product=hypothetical protein;protein_id=WP_011881744.1;transl_table=11 NZ_CAJZAL010000139.1 RefSeq gene 5113 8676 . + . ID=gene-LDO38_RS16225;Name=LDO38_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16225;old_locus_tag=BVI2075_380006 NZ_CAJZAL010000139.1 Protein Homology CDS 5113 8676 . + 0 ID=cds-WP_069246466.1;Parent=gene-LDO38_RS16225;Dbxref=GenBank:WP_069246466.1;Name=WP_069246466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881745.1;locus_tag=LDO38_RS16225;product=ImcF-related family protein;protein_id=WP_069246466.1;transl_table=11 NZ_CAJZAL010000139.1 RefSeq gene 8693 10507 . + . ID=gene-LDO38_RS16230;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LDO38_RS16230;old_locus_tag=BVI2075_380007 NZ_CAJZAL010000139.1 Protein Homology CDS 8693 10507 . + 0 ID=cds-WP_069246467.1;Parent=gene-LDO38_RS16230;Dbxref=GenBank:WP_069246467.1;Name=WP_069246467.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725199.1;locus_tag=LDO38_RS16230;product=type VI secretion system baseplate subunit TssF;protein_id=WP_069246467.1;transl_table=11 NZ_CAJZAL010000139.1 RefSeq gene 10606 11586 . + . ID=gene-LDO38_RS16235;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=LDO38_RS16235;old_locus_tag=BVI2075_380008 NZ_CAJZAL010000139.1 Protein Homology CDS 10606 11586 . + 0 ID=cds-WP_224056529.1;Parent=gene-LDO38_RS16235;Dbxref=GenBank:WP_224056529.1;Name=WP_224056529.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724742.1;locus_tag=LDO38_RS16235;product=type VI secretion system baseplate subunit TssG;protein_id=WP_224056529.1;transl_table=11 NZ_CAJZAL010000139.1 RefSeq gene 11633 12274 . + . ID=gene-LDO38_RS16240;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=LDO38_RS16240;old_locus_tag=BVI2075_380009 NZ_CAJZAL010000139.1 Protein Homology CDS 11633 12274 . + 0 ID=cds-WP_011882412.1;Parent=gene-LDO38_RS16240;Dbxref=GenBank:WP_011882412.1;Name=WP_011882412.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882412.1;locus_tag=LDO38_RS16240;product=type VI secretion system lipoprotein TssJ;protein_id=WP_011882412.1;transl_table=11 NZ_CAJZAL010000139.1 RefSeq gene 12403 12672 . + . ID=gene-LDO38_RS16245;Name=LDO38_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16245;old_locus_tag=BVI2075_380010 NZ_CAJZAL010000139.1 Protein Homology CDS 12403 12672 . + 0 ID=cds-WP_224056530.1;Parent=gene-LDO38_RS16245;Dbxref=GenBank:WP_224056530.1;Name=WP_224056530.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882411.1;locus_tag=LDO38_RS16245;product=PAAR domain-containing protein;protein_id=WP_224056530.1;transl_table=11 NZ_CAJZAL010000139.1 RefSeq gene 12984 14462 . + . ID=gene-LDO38_RS16250;Name=LDO38_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16250;old_locus_tag=BVI2075_380011 NZ_CAJZAL010000139.1 Protein Homology CDS 12984 14462 . + 0 ID=cds-WP_069240294.1;Parent=gene-LDO38_RS16250;Dbxref=GenBank:WP_069240294.1;Name=WP_069240294.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882410.1;locus_tag=LDO38_RS16250;product=sensor domain-containing diguanylate cyclase;protein_id=WP_069240294.1;transl_table=11 NZ_CAJZAL010000139.1 RefSeq gene 14532 14864 . + . ID=gene-LDO38_RS16255;Name=LDO38_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16255;old_locus_tag=BVI2075_380012 NZ_CAJZAL010000139.1 Protein Homology CDS 14532 14864 . + 0 ID=cds-WP_069240293.1;Parent=gene-LDO38_RS16255;Dbxref=GenBank:WP_069240293.1;Name=WP_069240293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759807.1;locus_tag=LDO38_RS16255;product=cupin domain-containing protein;protein_id=WP_069240293.1;transl_table=11 NZ_CAJZAL010000139.1 RefSeq gene 14954 15874 . - . ID=gene-LDO38_RS16260;Name=LDO38_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16260;old_locus_tag=BVI2075_380013 NZ_CAJZAL010000139.1 Protein Homology CDS 14954 15874 . - 0 ID=cds-WP_046426359.1;Parent=gene-LDO38_RS16260;Dbxref=GenBank:WP_046426359.1;Name=WP_046426359.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198444.1;locus_tag=LDO38_RS16260;product=alpha/beta hydrolase;protein_id=WP_046426359.1;transl_table=11 NZ_CAJZAL010000139.1 RefSeq gene 15936 17039 . - . ID=gene-LDO38_RS16265;Name=LDO38_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16265;old_locus_tag=BVI2075_380014 NZ_CAJZAL010000139.1 Protein Homology CDS 15936 17039 . - 0 ID=cds-WP_046426606.1;Parent=gene-LDO38_RS16265;Dbxref=GenBank:WP_046426606.1;Name=WP_046426606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409779.1;locus_tag=LDO38_RS16265;product=OpgC domain-containing protein;protein_id=WP_046426606.1;transl_table=11 NZ_CAJZAL010000139.1 RefSeq gene 17429 18583 . + . ID=gene-LDO38_RS16270;Name=LDO38_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16270;old_locus_tag=BVI2075_380015 NZ_CAJZAL010000139.1 Protein Homology CDS 17429 18583 . + 0 ID=cds-WP_014724747.1;Parent=gene-LDO38_RS16270;Dbxref=GenBank:WP_014724747.1;Name=WP_014724747.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009907726.1;locus_tag=LDO38_RS16270;product=porin;protein_id=WP_014724747.1;transl_table=11 NZ_CAJZAL010000139.1 RefSeq gene 18639 19025 . - . ID=gene-LDO38_RS16275;Name=LDO38_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16275;old_locus_tag=BVI2075_380016 NZ_CAJZAL010000139.1 Protein Homology CDS 18639 19025 . - 0 ID=cds-WP_045577908.1;Parent=gene-LDO38_RS16275;Dbxref=GenBank:WP_045577908.1;Name=WP_045577908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659031.1;locus_tag=LDO38_RS16275;product=ester cyclase;protein_id=WP_045577908.1;transl_table=11 NZ_CAJZAL010000139.1 RefSeq gene 19079 19975 . - . ID=gene-LDO38_RS16280;Name=LDO38_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16280;old_locus_tag=BVI2075_380017 NZ_CAJZAL010000139.1 Protein Homology CDS 19079 19975 . - 0 ID=cds-WP_014724748.1;Parent=gene-LDO38_RS16280;Dbxref=GenBank:WP_014724748.1;Name=WP_014724748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756286.1;locus_tag=LDO38_RS16280;product=LysR substrate-binding domain-containing protein;protein_id=WP_014724748.1;transl_table=11 NZ_CAJZAL010000139.1 RefSeq gene 20507 21352 . + . ID=gene-LDO38_RS16285;Name=LDO38_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16285;old_locus_tag=BVI2075_380019 NZ_CAJZAL010000139.1 Protein Homology CDS 20507 21352 . + 0 ID=cds-WP_212151733.1;Parent=gene-LDO38_RS16285;Dbxref=GenBank:WP_212151733.1;Name=WP_212151733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339846.1;locus_tag=LDO38_RS16285;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_212151733.1;transl_table=11 NZ_CAJZAL010000139.1 RefSeq pseudogene 21569 21779 . + . ID=gene-LDO38_RS30560;Name=LDO38_RS30560;end_range=21779,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30560;old_locus_tag=BVI2075_380020;partial=true;pseudo=true NZ_CAJZAL010000139.1 Protein Homology CDS 21569 21779 . + 0 ID=cds-LDO38_RS30560;Parent=gene-LDO38_RS30560;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=21779,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366249.1;locus_tag=LDO38_RS30560;partial=true;product=class A beta-lactamase;pseudo=true;transl_table=11 NZ_CAJZAL010000139.1 RefSeq gene 21790 22052 . + . ID=gene-LDO38_RS30565;Name=LDO38_RS30565;end_range=22052,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30565;partial=true;start_range=.,21790 NZ_CAJZAL010000139.1 Protein Homology CDS 21790 22052 . + 1 ID=cds-WP_435520954.1;Parent=gene-LDO38_RS30565;Dbxref=GenBank:WP_435520954.1;Name=WP_435520954.1;Ontology_term=GO:0030655,GO:0008800;end_range=22052,.;gbkey=CDS;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366249.1;locus_tag=LDO38_RS30565;partial=true;product=serine hydrolase;protein_id=WP_435520954.1;start_range=.,21790;transl_table=11 ##sequence-region NZ_CAJZAL010000140.1 1 35802 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000140.1 RefSeq region 1 35802 . + . ID=NZ_CAJZAL010000140.1:1..35802;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_39 NZ_CAJZAL010000140.1 RefSeq gene 1 436 . + . ID=gene-LDO38_RS16295;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=LDO38_RS16295;old_locus_tag=BVI2075_390001;partial=true;start_range=.,1 NZ_CAJZAL010000140.1 Protein Homology CDS 1 436 . + 1 ID=cds-WP_224056531.1;Parent=gene-LDO38_RS16295;Dbxref=GenBank:WP_224056531.1;Name=WP_224056531.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214311.1;locus_tag=LDO38_RS16295;partial=true;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_224056531.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 555 887 . + . ID=gene-LDO38_RS16300;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=LDO38_RS16300;old_locus_tag=BVI2075_390002 NZ_CAJZAL010000140.1 Protein Homology CDS 555 887 . + 0 ID=cds-WP_011886265.1;Parent=gene-LDO38_RS16300;Dbxref=GenBank:WP_011886265.1;Name=WP_011886265.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408032.1;locus_tag=LDO38_RS16300;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_011886265.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 973 1413 . + . ID=gene-LDO38_RS16305;Name=LDO38_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16305;old_locus_tag=BVI2075_390003 NZ_CAJZAL010000140.1 Protein Homology CDS 973 1413 . + 0 ID=cds-WP_011886266.1;Parent=gene-LDO38_RS16305;Dbxref=GenBank:WP_011886266.1;Name=WP_011886266.1;Ontology_term=GO:0044780;gbkey=CDS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402753.1;locus_tag=LDO38_RS16305;product=flagella synthesis protein FlgN;protein_id=WP_011886266.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq pseudogene 1481 2677 . - . ID=gene-LDO38_RS30185;Name=LDO38_RS30185;end_range=2677,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30185;partial=true;pseudo=true NZ_CAJZAL010000140.1 Protein Homology CDS 1481 2677 . - 0 ID=cds-LDO38_RS30185;Parent=gene-LDO38_RS30185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2677,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483179.1;locus_tag=LDO38_RS30185;partial=true;product=M24 family metallopeptidase;pseudo=true;transl_table=11 NZ_CAJZAL010000140.1 RefSeq pseudogene 2846 3499 . - . ID=gene-LDO38_RS30190;Name=LDO38_RS30190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30190;partial=true;pseudo=true;start_range=.,2846 NZ_CAJZAL010000140.1 Protein Homology CDS 2846 3499 . - 0 ID=cds-LDO38_RS30190;Parent=gene-LDO38_RS30190;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483179.1;locus_tag=LDO38_RS30190;partial=true;product=aminopeptidase P family N-terminal domain-containing protein;pseudo=true;start_range=.,2846;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 3860 4660 . + . ID=gene-LDO38_RS16315;Name=LDO38_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16315;old_locus_tag=BVI2075_390005 NZ_CAJZAL010000140.1 Protein Homology CDS 3860 4660 . + 0 ID=cds-WP_011886268.1;Parent=gene-LDO38_RS16315;Dbxref=GenBank:WP_011886268.1;Name=WP_011886268.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723817.1;locus_tag=LDO38_RS16315;product=helix-turn-helix domain-containing protein;protein_id=WP_011886268.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 4949 6190 . - . ID=gene-LDO38_RS16320;Name=LDO38_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16320;old_locus_tag=BVI2075_390006 NZ_CAJZAL010000140.1 Protein Homology CDS 4949 6190 . - 0 ID=cds-WP_011886269.1;Parent=gene-LDO38_RS16320;Dbxref=GenBank:WP_011886269.1;Name=WP_011886269.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658147.1;locus_tag=LDO38_RS16320;product=multifunctional CCA addition/repair protein;protein_id=WP_011886269.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 6187 6834 . - . ID=gene-LDO38_RS16325;Name=LDO38_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16325;old_locus_tag=BVI2075_390007 NZ_CAJZAL010000140.1 Protein Homology CDS 6187 6834 . - 0 ID=cds-WP_011886270.1;Parent=gene-LDO38_RS16325;Dbxref=GenBank:WP_011886270.1;Name=WP_011886270.1;Ontology_term=GO:0006749,GO:0004364;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895787.1;locus_tag=LDO38_RS16325;product=glutathione S-transferase family protein;protein_id=WP_011886270.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 6890 7849 . - . ID=gene-LDO38_RS16330;Name=LDO38_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16330;old_locus_tag=BVI2075_390008 NZ_CAJZAL010000140.1 Protein Homology CDS 6890 7849 . - 0 ID=cds-WP_034192488.1;Parent=gene-LDO38_RS16330;Dbxref=GenBank:WP_034192488.1;Name=WP_034192488.1;Ontology_term=GO:0010257,GO:0022904,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=NADH dehydrogenase complex assembly|0010257||IEA,respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197236.1;locus_tag=LDO38_RS16330;product=complex I NDUFA9 subunit family protein;protein_id=WP_034192488.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 8011 9963 . - . ID=gene-LDO38_RS16335;Name=LDO38_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16335;old_locus_tag=BVI2075_390009 NZ_CAJZAL010000140.1 Protein Homology CDS 8011 9963 . - 0 ID=cds-WP_011886272.1;Parent=gene-LDO38_RS16335;Dbxref=GenBank:WP_011886272.1;Name=WP_011886272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602139.1;locus_tag=LDO38_RS16335;product=lytic transglycosylase domain-containing protein;protein_id=WP_011886272.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 9972 10580 . + . ID=gene-LDO38_RS16340;Name=LDO38_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16340;old_locus_tag=BVI2075_390010 NZ_CAJZAL010000140.1 Protein Homology CDS 9972 10580 . + 0 ID=cds-WP_059622209.1;Parent=gene-LDO38_RS16340;Dbxref=GenBank:WP_059622209.1;Name=WP_059622209.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353482.1;locus_tag=LDO38_RS16340;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_059622209.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 10646 11158 . - . ID=gene-LDO38_RS16345;Name=LDO38_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16345;old_locus_tag=BVI2075_390011 NZ_CAJZAL010000140.1 Protein Homology CDS 10646 11158 . - 0 ID=cds-WP_014723821.1;Parent=gene-LDO38_RS16345;Dbxref=GenBank:WP_014723821.1;Name=WP_014723821.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024208.1;locus_tag=LDO38_RS16345;product=winged helix DNA-binding protein;protein_id=WP_014723821.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 11307 11963 . + . ID=gene-LDO38_RS16350;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=LDO38_RS16350;old_locus_tag=BVI2075_390013 NZ_CAJZAL010000140.1 Protein Homology CDS 11307 11963 . + 0 ID=cds-WP_011886275.1;Parent=gene-LDO38_RS16350;Dbxref=GenBank:WP_011886275.1;Name=WP_011886275.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886275.1;locus_tag=LDO38_RS16350;product=5-oxoprolinase subunit PxpB;protein_id=WP_011886275.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 11960 13027 . + . ID=gene-LDO38_RS16355;Name=LDO38_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16355;old_locus_tag=BVI2075_390012 NZ_CAJZAL010000140.1 Protein Homology CDS 11960 13027 . + 0 ID=cds-WP_011886276.1;Parent=gene-LDO38_RS16355;Dbxref=GenBank:WP_011886276.1;Name=WP_011886276.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886276.1;locus_tag=LDO38_RS16355;product=biotin-dependent carboxyltransferase family protein;protein_id=WP_011886276.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 13083 13847 . + . ID=gene-LDO38_RS16360;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=LDO38_RS16360;old_locus_tag=BVI2075_390014 NZ_CAJZAL010000140.1 Protein Homology CDS 13083 13847 . + 0 ID=cds-WP_011886277.1;Parent=gene-LDO38_RS16360;Dbxref=GenBank:WP_011886277.1;Name=WP_011886277.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886277.1;locus_tag=LDO38_RS16360;product=5-oxoprolinase subunit PxpA;protein_id=WP_011886277.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 14412 15557 . - . ID=gene-LDO38_RS16365;Name=LDO38_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16365;old_locus_tag=BVI2075_390015 NZ_CAJZAL010000140.1 Protein Homology CDS 14412 15557 . - 0 ID=cds-WP_011886278.1;Parent=gene-LDO38_RS16365;Dbxref=GenBank:WP_011886278.1;Name=WP_011886278.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895779.1;locus_tag=LDO38_RS16365;product=TraB/GumN family protein;protein_id=WP_011886278.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 15550 16566 . - . ID=gene-LDO38_RS16370;Name=LDO38_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16370;old_locus_tag=BVI2075_390016 NZ_CAJZAL010000140.1 Protein Homology CDS 15550 16566 . - 0 ID=cds-WP_011886279.1;Parent=gene-LDO38_RS16370;Dbxref=GenBank:WP_011886279.1;Name=WP_011886279.1;Ontology_term=GO:0015833,GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523051.1;locus_tag=LDO38_RS16370;product=peptide ABC transporter ATP-binding protein;protein_id=WP_011886279.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 16563 17561 . - . ID=gene-LDO38_RS16375;Name=LDO38_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16375;old_locus_tag=BVI2075_390017 NZ_CAJZAL010000140.1 Protein Homology CDS 16563 17561 . - 0 ID=cds-WP_034192484.1;Parent=gene-LDO38_RS16375;Dbxref=GenBank:WP_034192484.1;Name=WP_034192484.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477543.1;locus_tag=LDO38_RS16375;product=ABC transporter ATP-binding protein;protein_id=WP_034192484.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 17694 18611 . - . ID=gene-LDO38_RS16380;Name=LDO38_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16380;old_locus_tag=BVI2075_390018 NZ_CAJZAL010000140.1 Protein Homology CDS 17694 18611 . - 0 ID=cds-WP_011886281.1;Parent=gene-LDO38_RS16380;Dbxref=GenBank:WP_011886281.1;Name=WP_011886281.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489141.1;locus_tag=LDO38_RS16380;product=ABC transporter permease subunit;protein_id=WP_011886281.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 18616 19626 . - . ID=gene-LDO38_RS16385;Name=LDO38_RS16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16385;old_locus_tag=BVI2075_390019 NZ_CAJZAL010000140.1 Protein Homology CDS 18616 19626 . - 0 ID=cds-WP_011886282.1;Parent=gene-LDO38_RS16385;Dbxref=GenBank:WP_011886282.1;Name=WP_011886282.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014192601.1;locus_tag=LDO38_RS16385;product=ABC transporter permease subunit;protein_id=WP_011886282.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 19746 21374 . - . ID=gene-LDO38_RS16390;Name=LDO38_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16390;old_locus_tag=BVI2075_390020 NZ_CAJZAL010000140.1 Protein Homology CDS 19746 21374 . - 0 ID=cds-WP_059454082.1;Parent=gene-LDO38_RS16390;Dbxref=GenBank:WP_059454082.1;Name=WP_059454082.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417151.1;locus_tag=LDO38_RS16390;product=ABC transporter substrate-binding protein;protein_id=WP_059454082.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 21718 23025 . - . ID=gene-LDO38_RS16395;Name=LDO38_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16395;old_locus_tag=BVI2075_390021 NZ_CAJZAL010000140.1 Protein Homology CDS 21718 23025 . - 0 ID=cds-WP_069246354.1;Parent=gene-LDO38_RS16395;Dbxref=GenBank:WP_069246354.1;Name=WP_069246354.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895773.1;locus_tag=LDO38_RS16395;product=MFS transporter;protein_id=WP_069246354.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 23220 23531 . - . ID=gene-LDO38_RS16400;Name=LDO38_RS16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16400;old_locus_tag=BVI2075_390022 NZ_CAJZAL010000140.1 Protein Homology CDS 23220 23531 . - 0 ID=cds-WP_011886285.1;Parent=gene-LDO38_RS16400;Dbxref=GenBank:WP_011886285.1;Name=WP_011886285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895772.1;locus_tag=LDO38_RS16400;product=high-potential iron-sulfur protein;protein_id=WP_011886285.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 23705 24814 . - . ID=gene-LDO38_RS16405;Name=LDO38_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16405;old_locus_tag=BVI2075_390023 NZ_CAJZAL010000140.1 Protein Homology CDS 23705 24814 . - 0 ID=cds-WP_011886286.1;Parent=gene-LDO38_RS16405;Dbxref=GenBank:WP_011886286.1;Name=WP_011886286.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886286.1;locus_tag=LDO38_RS16405;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_011886286.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 24924 25904 . - . ID=gene-LDO38_RS16410;Name=LDO38_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16410;old_locus_tag=BVI2075_390024 NZ_CAJZAL010000140.1 Protein Homology CDS 24924 25904 . - 0 ID=cds-WP_011886287.1;Parent=gene-LDO38_RS16410;Dbxref=GenBank:WP_011886287.1;Name=WP_011886287.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011857941.1;locus_tag=LDO38_RS16410;product=AAA family ATPase;protein_id=WP_011886287.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 26141 26869 . + . ID=gene-LDO38_RS16415;Name=LDO38_RS16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16415;old_locus_tag=BVI2075_390025 NZ_CAJZAL010000140.1 Protein Homology CDS 26141 26869 . + 0 ID=cds-WP_069246355.1;Parent=gene-LDO38_RS16415;Dbxref=GenBank:WP_069246355.1;Name=WP_069246355.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329402.1;locus_tag=LDO38_RS16415;product=nitroreductase;protein_id=WP_069246355.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 27014 27502 . + . ID=gene-LDO38_RS16420;Name=LDO38_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16420;old_locus_tag=BVI2075_390027 NZ_CAJZAL010000140.1 Protein Homology CDS 27014 27502 . + 0 ID=cds-WP_014723829.1;Parent=gene-LDO38_RS16420;Dbxref=GenBank:WP_014723829.1;Name=WP_014723829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546435.1;locus_tag=LDO38_RS16420;product=hypothetical protein;protein_id=WP_014723829.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 27508 28323 . + . ID=gene-LDO38_RS16425;Name=LDO38_RS16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16425;old_locus_tag=BVI2075_390026 NZ_CAJZAL010000140.1 Protein Homology CDS 27508 28323 . + 0 ID=cds-WP_011886290.1;Parent=gene-LDO38_RS16425;Dbxref=GenBank:WP_011886290.1;Name=WP_011886290.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353499.1;locus_tag=LDO38_RS16425;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_011886290.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 28613 29383 . + . ID=gene-LDO38_RS16430;Name=LDO38_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16430;old_locus_tag=BVI2075_390029 NZ_CAJZAL010000140.1 Protein Homology CDS 28613 29383 . + 0 ID=cds-WP_011886291.1;Parent=gene-LDO38_RS16430;Dbxref=GenBank:WP_011886291.1;Name=WP_011886291.1;Ontology_term=GO:0004324;gbkey=CDS;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477532.1;locus_tag=LDO38_RS16430;product=ferredoxin--NADP reductase;protein_id=WP_011886291.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 29553 29816 . - . ID=gene-LDO38_RS16435;Name=LDO38_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16435 NZ_CAJZAL010000140.1 GeneMarkS-2+ CDS 29553 29816 . - 0 ID=cds-WP_131753889.1;Parent=gene-LDO38_RS16435;Dbxref=GenBank:WP_131753889.1;Name=WP_131753889.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS16435;product=hypothetical protein;protein_id=WP_131753889.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 29800 30615 . + . ID=gene-LDO38_RS16440;Name=rqpS;gbkey=Gene;gene=rqpS;gene_biotype=protein_coding;locus_tag=LDO38_RS16440;old_locus_tag=BVI2075_390030 NZ_CAJZAL010000140.1 Protein Homology CDS 29800 30615 . + 0 ID=cds-WP_212197314.1;Parent=gene-LDO38_RS16440;Dbxref=GenBank:WP_212197314.1;Name=WP_212197314.1;gbkey=CDS;gene=rqpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482035.1;locus_tag=LDO38_RS16440;product=quorum system sensor histidine kinase RqpS;protein_id=WP_212197314.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 30623 31279 . + . ID=gene-LDO38_RS16445;Name=rqpR;gbkey=Gene;gene=rqpR;gene_biotype=protein_coding;locus_tag=LDO38_RS16445;old_locus_tag=BVI2075_390031 NZ_CAJZAL010000140.1 Protein Homology CDS 30623 31279 . + 0 ID=cds-WP_011886293.1;Parent=gene-LDO38_RS16445;Dbxref=GenBank:WP_011886293.1;Name=WP_011886293.1;Note=The RqpSR system (Regulating Quorum sensing and Pathogenicity Sensor kinase and Response regulator) co-occurs with and modulates the expression of cis-2-dodecenoic acid quorum-sensing systems.;gbkey=CDS;gene=rqpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886293.1;locus_tag=LDO38_RS16445;product=response regulator transcription factor RqpR;protein_id=WP_011886293.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 31573 32979 . + . ID=gene-LDO38_RS16450;Name=LDO38_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16450;old_locus_tag=BVI2075_390033 NZ_CAJZAL010000140.1 Protein Homology CDS 31573 32979 . + 0 ID=cds-WP_011886294.1;Parent=gene-LDO38_RS16450;Dbxref=GenBank:WP_011886294.1;Name=WP_011886294.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334563.1;locus_tag=LDO38_RS16450;product=amino acid permease;protein_id=WP_011886294.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 33299 34324 . + . ID=gene-LDO38_RS16455;Name=LDO38_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16455;old_locus_tag=BVI2075_390034 NZ_CAJZAL010000140.1 Protein Homology CDS 33299 34324 . + 0 ID=cds-WP_014723832.1;Parent=gene-LDO38_RS16455;Dbxref=GenBank:WP_014723832.1;Name=WP_014723832.1;Ontology_term=GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723832.1;locus_tag=LDO38_RS16455;product=XdhC family protein;protein_id=WP_014723832.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 34383 35117 . - . ID=gene-LDO38_RS16460;Name=LDO38_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16460;old_locus_tag=BVI2075_390035 NZ_CAJZAL010000140.1 Protein Homology CDS 34383 35117 . - 0 ID=cds-WP_059992002.1;Parent=gene-LDO38_RS16460;Dbxref=GenBank:WP_059992002.1;Name=WP_059992002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402716.1;locus_tag=LDO38_RS16460;product=PepSY-associated TM helix domain-containing protein;protein_id=WP_059992002.1;transl_table=11 NZ_CAJZAL010000140.1 RefSeq gene 35405 35728 . - . ID=gene-LDO38_RS16465;Name=LDO38_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16465;old_locus_tag=BVI2075_390036 NZ_CAJZAL010000140.1 Protein Homology CDS 35405 35728 . - 0 ID=cds-WP_014723834.1;Parent=gene-LDO38_RS16465;Dbxref=GenBank:WP_014723834.1;Name=WP_014723834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658173.1;locus_tag=LDO38_RS16465;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;protein_id=WP_014723834.1;transl_table=11 ##sequence-region NZ_CAJZAL010000141.1 1 73160 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000141.1 RefSeq region 1 73160 . + . ID=NZ_CAJZAL010000141.1:1..73160;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_4 NZ_CAJZAL010000141.1 RefSeq gene 124 2079 . - . ID=gene-LDO38_RS16470;Name=LDO38_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16470;old_locus_tag=BVI2075_40001 NZ_CAJZAL010000141.1 Protein Homology CDS 124 2079 . - 0 ID=cds-WP_059460884.1;Parent=gene-LDO38_RS16470;Dbxref=GenBank:WP_059460884.1;Name=WP_059460884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199580.1;locus_tag=LDO38_RS16470;product=PhoX family protein;protein_id=WP_059460884.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 2294 3487 . - . ID=gene-LDO38_RS16475;Name=LDO38_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16475;old_locus_tag=BVI2075_40002 NZ_CAJZAL010000141.1 Protein Homology CDS 2294 3487 . - 0 ID=cds-WP_069246191.1;Parent=gene-LDO38_RS16475;Dbxref=GenBank:WP_069246191.1;Name=WP_069246191.1;Ontology_term=GO:0072488,GO:0008519,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694238.1;locus_tag=LDO38_RS16475;product=ammonium transporter;protein_id=WP_069246191.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 3741 4076 . - . ID=gene-LDO38_RS16480;Name=LDO38_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16480;old_locus_tag=BVI2075_40003 NZ_CAJZAL010000141.1 Protein Homology CDS 3741 4076 . - 0 ID=cds-WP_011884061.1;Parent=gene-LDO38_RS16480;Dbxref=GenBank:WP_011884061.1;Name=WP_011884061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545006.1;locus_tag=LDO38_RS16480;product=hypothetical protein;protein_id=WP_011884061.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 4268 4696 . + . ID=gene-LDO38_RS16485;Name=LDO38_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16485;old_locus_tag=BVI2075_40004 NZ_CAJZAL010000141.1 Protein Homology CDS 4268 4696 . + 0 ID=cds-WP_011884063.1;Parent=gene-LDO38_RS16485;Dbxref=GenBank:WP_011884063.1;Name=WP_011884063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897553.1;locus_tag=LDO38_RS16485;product=hypothetical protein;protein_id=WP_011884063.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 4789 5229 . + . ID=gene-LDO38_RS16490;Name=LDO38_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16490;old_locus_tag=BVI2075_40006 NZ_CAJZAL010000141.1 Protein Homology CDS 4789 5229 . + 0 ID=cds-WP_011884064.1;Parent=gene-LDO38_RS16490;Dbxref=GenBank:WP_011884064.1;Name=WP_011884064.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884064.1;locus_tag=LDO38_RS16490;product=Rrf2 family transcriptional regulator;protein_id=WP_011884064.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 5361 6002 . + . ID=gene-LDO38_RS16495;Name=LDO38_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16495;old_locus_tag=BVI2075_40005 NZ_CAJZAL010000141.1 Protein Homology CDS 5361 6002 . + 0 ID=cds-WP_059462926.1;Parent=gene-LDO38_RS16495;Dbxref=GenBank:WP_059462926.1;Name=WP_059462926.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601647.1;locus_tag=LDO38_RS16495;product=NAD(P)-dependent oxidoreductase;protein_id=WP_059462926.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 6266 6736 . + . ID=gene-LDO38_RS16500;Name=LDO38_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16500;old_locus_tag=BVI2075_40007 NZ_CAJZAL010000141.1 Protein Homology CDS 6266 6736 . + 0 ID=cds-WP_011884069.1;Parent=gene-LDO38_RS16500;Dbxref=GenBank:WP_011884069.1;Name=WP_011884069.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332862.1;locus_tag=LDO38_RS16500;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011884069.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 6927 7088 . + . ID=gene-LDO38_RS16505;Name=LDO38_RS16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16505;old_locus_tag=BVI2075_40008 NZ_CAJZAL010000141.1 Protein Homology CDS 6927 7088 . + 0 ID=cds-WP_011884072.1;Parent=gene-LDO38_RS16505;Dbxref=GenBank:WP_011884072.1;Name=WP_011884072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415664.1;locus_tag=LDO38_RS16505;product=hypothetical protein;protein_id=WP_011884072.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 7401 9692 . - . ID=gene-LDO38_RS16510;Name=LDO38_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16510;old_locus_tag=BVI2075_40009 NZ_CAJZAL010000141.1 Protein Homology CDS 7401 9692 . - 0 ID=cds-WP_059894770.1;Parent=gene-LDO38_RS16510;Dbxref=GenBank:WP_059894770.1;Name=WP_059894770.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534567.1;locus_tag=LDO38_RS16510;product=FUSC family protein;protein_id=WP_059894770.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 9874 13212 . + . ID=gene-LDO38_RS16515;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=LDO38_RS16515;old_locus_tag=BVI2075_40010 NZ_CAJZAL010000141.1 Protein Homology CDS 9874 13212 . + 0 ID=cds-WP_069246192.1;Parent=gene-LDO38_RS16515;Dbxref=GenBank:WP_069246192.1;Name=WP_069246192.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884075.1;locus_tag=LDO38_RS16515;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_069246192.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 13209 16913 . + . ID=gene-LDO38_RS16520;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=LDO38_RS16520;old_locus_tag=BVI2075_40011 NZ_CAJZAL010000141.1 Protein Homology CDS 13209 16913 . + 0 ID=cds-WP_069246193.1;Parent=gene-LDO38_RS16520;Dbxref=GenBank:WP_069246193.1;Name=WP_069246193.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524,GO:0008854,GO:0009338;gbkey=CDS;gene=recB;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363476.1;locus_tag=LDO38_RS16520;product=exodeoxyribonuclease V subunit beta;protein_id=WP_069246193.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 16910 19234 . + . ID=gene-LDO38_RS16525;Name=LDO38_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16525;old_locus_tag=BVI2075_40012 NZ_CAJZAL010000141.1 Protein Homology CDS 16910 19234 . + 0 ID=cds-WP_069246194.1;Parent=gene-LDO38_RS16525;Dbxref=GenBank:WP_069246194.1;Name=WP_069246194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722771.1;locus_tag=LDO38_RS16525;product=AAA family ATPase;protein_id=WP_069246194.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 19231 19635 . + . ID=gene-LDO38_RS16530;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=LDO38_RS16530;old_locus_tag=BVI2075_40013 NZ_CAJZAL010000141.1 Protein Homology CDS 19231 19635 . + 0 ID=cds-WP_011884080.1;Parent=gene-LDO38_RS16530;Dbxref=GenBank:WP_011884080.1;Name=WP_011884080.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884080.1;locus_tag=LDO38_RS16530;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_011884080.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 19882 21174 . - . ID=gene-LDO38_RS16535;Name=LDO38_RS16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16535;old_locus_tag=BVI2075_40014 NZ_CAJZAL010000141.1 Protein Homology CDS 19882 21174 . - 0 ID=cds-WP_069246195.1;Parent=gene-LDO38_RS16535;Dbxref=GenBank:WP_069246195.1;Name=WP_069246195.1;Ontology_term=GO:0007165,GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351492.1;locus_tag=LDO38_RS16535;product=sensor domain-containing phosphodiesterase;protein_id=WP_069246195.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 21392 22318 . - . ID=gene-LDO38_RS16540;Name=LDO38_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16540;old_locus_tag=BVI2075_40016 NZ_CAJZAL010000141.1 Protein Homology CDS 21392 22318 . - 0 ID=cds-WP_059462922.1;Parent=gene-LDO38_RS16540;Dbxref=GenBank:WP_059462922.1;Name=WP_059462922.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545018.1;locus_tag=LDO38_RS16540;product=DMT family transporter;protein_id=WP_059462922.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 22448 22696 . - . ID=gene-LDO38_RS16545;Name=LDO38_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16545;old_locus_tag=BVI2075_40018 NZ_CAJZAL010000141.1 Protein Homology CDS 22448 22696 . - 0 ID=cds-WP_011884086.1;Parent=gene-LDO38_RS16545;Dbxref=GenBank:WP_011884086.1;Name=WP_011884086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363480.1;locus_tag=LDO38_RS16545;product=hypothetical protein;protein_id=WP_011884086.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 22908 23123 . - . ID=gene-LDO38_RS16550;Name=LDO38_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16550;old_locus_tag=BVI2075_40019 NZ_CAJZAL010000141.1 Protein Homology CDS 22908 23123 . - 0 ID=cds-WP_034193216.1;Parent=gene-LDO38_RS16550;Dbxref=GenBank:WP_034193216.1;Name=WP_034193216.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545020.1;locus_tag=LDO38_RS16550;product=glycine zipper 2TM domain-containing protein;protein_id=WP_034193216.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 23391 25322 . - . ID=gene-LDO38_RS16555;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=LDO38_RS16555;old_locus_tag=BVI2075_40020 NZ_CAJZAL010000141.1 Protein Homology CDS 23391 25322 . - 0 ID=cds-WP_011884090.1;Parent=gene-LDO38_RS16555;Dbxref=GenBank:WP_011884090.1;Name=WP_011884090.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697214.1;locus_tag=LDO38_RS16555;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_011884090.1;transl_table=11 NZ_CAJZAL010000141.1 cmsearch riboswitch 25447 25563 . - . ID=id-NZ_CAJZAL010000141.1:25447..25563;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAL010000141.1 RefSeq gene 25829 26077 . + . ID=gene-LDO38_RS16560;Name=LDO38_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16560;old_locus_tag=BVI2075_40021 NZ_CAJZAL010000141.1 Protein Homology CDS 25829 26077 . + 0 ID=cds-WP_034193219.1;Parent=gene-LDO38_RS16560;Dbxref=GenBank:WP_034193219.1;Name=WP_034193219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363482.1;locus_tag=LDO38_RS16560;product=pentapeptide MXKDX repeat protein;protein_id=WP_034193219.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 26222 26854 . + . ID=gene-LDO38_RS16565;Name=LDO38_RS16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16565;old_locus_tag=BVI2075_40023 NZ_CAJZAL010000141.1 Protein Homology CDS 26222 26854 . + 0 ID=cds-WP_045579497.1;Parent=gene-LDO38_RS16565;Dbxref=GenBank:WP_045579497.1;Name=WP_045579497.1;Ontology_term=GO:0005506,GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884093.1;locus_tag=LDO38_RS16565;product=cytochrome b/b6 domain-containing protein;protein_id=WP_045579497.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 26884 27672 . + . ID=gene-LDO38_RS16570;Name=LDO38_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16570;old_locus_tag=BVI2075_40022 NZ_CAJZAL010000141.1 Protein Homology CDS 26884 27672 . + 0 ID=cds-WP_011884095.1;Parent=gene-LDO38_RS16570;Dbxref=GenBank:WP_011884095.1;Name=WP_011884095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754215.1;locus_tag=LDO38_RS16570;product=molybdopterin-dependent oxidoreductase;protein_id=WP_011884095.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 28119 29309 . + . ID=gene-LDO38_RS16575;Name=LDO38_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16575;old_locus_tag=BVI2075_40024 NZ_CAJZAL010000141.1 Protein Homology CDS 28119 29309 . + 0 ID=cds-WP_224056532.1;Parent=gene-LDO38_RS16575;Dbxref=GenBank:WP_224056532.1;Name=WP_224056532.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656444.1;locus_tag=LDO38_RS16575;product=EamA family transporter;protein_id=WP_224056532.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 29329 30528 . - . ID=gene-LDO38_RS16580;Name=LDO38_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16580;old_locus_tag=BVI2075_40025 NZ_CAJZAL010000141.1 Protein Homology CDS 29329 30528 . - 0 ID=cds-WP_011884099.1;Parent=gene-LDO38_RS16580;Dbxref=GenBank:WP_011884099.1;Name=WP_011884099.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884099.1;locus_tag=LDO38_RS16580;product=MFS transporter;protein_id=WP_011884099.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 30938 31762 . - . ID=gene-LDO38_RS16585;Name=LDO38_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16585;old_locus_tag=BVI2075_40026 NZ_CAJZAL010000141.1 Protein Homology CDS 30938 31762 . - 0 ID=cds-WP_014722779.1;Parent=gene-LDO38_RS16585;Dbxref=GenBank:WP_014722779.1;Name=WP_014722779.1;Ontology_term=GO:0004112;gbkey=CDS;go_function=cyclic-nucleotide phosphodiesterase activity|0004112||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762416.1;locus_tag=LDO38_RS16585;product=phosphodiesterase;protein_id=WP_014722779.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 31801 32832 . - . ID=gene-LDO38_RS16590;Name=LDO38_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16590;old_locus_tag=BVI2075_40027 NZ_CAJZAL010000141.1 Protein Homology CDS 31801 32832 . - 0 ID=cds-WP_034193221.1;Parent=gene-LDO38_RS16590;Dbxref=GenBank:WP_034193221.1;Name=WP_034193221.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497656.1;locus_tag=LDO38_RS16590;product=ABC transporter ATP-binding protein;protein_id=WP_034193221.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 32859 33755 . - . ID=gene-LDO38_RS16595;Name=LDO38_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16595;old_locus_tag=BVI2075_40028 NZ_CAJZAL010000141.1 Protein Homology CDS 32859 33755 . - 0 ID=cds-WP_059475894.1;Parent=gene-LDO38_RS16595;Dbxref=GenBank:WP_059475894.1;Name=WP_059475894.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755746.1;locus_tag=LDO38_RS16595;product=ABC transporter permease;protein_id=WP_059475894.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 33766 34590 . - . ID=gene-LDO38_RS16600;Name=LDO38_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16600;old_locus_tag=BVI2075_40029 NZ_CAJZAL010000141.1 Protein Homology CDS 33766 34590 . - 0 ID=cds-WP_014722781.1;Parent=gene-LDO38_RS16600;Dbxref=GenBank:WP_014722781.1;Name=WP_014722781.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255790.1;locus_tag=LDO38_RS16600;product=ABC transporter permease;protein_id=WP_014722781.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 34608 35636 . - . ID=gene-LDO38_RS16605;Name=LDO38_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16605;old_locus_tag=BVI2075_40030 NZ_CAJZAL010000141.1 Protein Homology CDS 34608 35636 . - 0 ID=cds-WP_069246196.1;Parent=gene-LDO38_RS16605;Dbxref=GenBank:WP_069246196.1;Name=WP_069246196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476396.1;locus_tag=LDO38_RS16605;product=ABC transporter substrate-binding protein;protein_id=WP_069246196.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 35707 36732 . - . ID=gene-LDO38_RS16610;Name=LDO38_RS16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16610;old_locus_tag=BVI2075_40031 NZ_CAJZAL010000141.1 Protein Homology CDS 35707 36732 . - 0 ID=cds-WP_059568527.1;Parent=gene-LDO38_RS16610;Dbxref=GenBank:WP_059568527.1;Name=WP_059568527.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545033.1;locus_tag=LDO38_RS16610;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_059568527.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 38019 40550 . + . ID=gene-LDO38_RS16615;Name=LDO38_RS16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16615;old_locus_tag=BVI2075_40034 NZ_CAJZAL010000141.1 Protein Homology CDS 38019 40550 . + 0 ID=cds-WP_014722782.1;Parent=gene-LDO38_RS16615;Dbxref=GenBank:WP_014722782.1;Name=WP_014722782.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363630.1;locus_tag=LDO38_RS16615;product=type VI secretion system Vgr family protein;protein_id=WP_014722782.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 40556 41530 . + . ID=gene-LDO38_RS16620;Name=LDO38_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16620;old_locus_tag=BVI2075_40035 NZ_CAJZAL010000141.1 Protein Homology CDS 40556 41530 . + 0 ID=cds-WP_041493804.1;Parent=gene-LDO38_RS16620;Dbxref=GenBank:WP_041493804.1;Name=WP_041493804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899046.1;locus_tag=LDO38_RS16620;product=DUF4123 domain-containing protein;protein_id=WP_041493804.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 41574 44474 . + . ID=gene-LDO38_RS16625;Name=LDO38_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16625;old_locus_tag=BVI2075_40037 NZ_CAJZAL010000141.1 Protein Homology CDS 41574 44474 . + 0 ID=cds-WP_224056533.1;Parent=gene-LDO38_RS16625;Dbxref=GenBank:WP_224056533.1;Name=WP_224056533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884201.1;locus_tag=LDO38_RS16625;product=T6SS effector BTH_I2691 family protein;protein_id=WP_224056533.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 44471 45202 . + . ID=gene-LDO38_RS16630;Name=LDO38_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16630;old_locus_tag=BVI2075_40038 NZ_CAJZAL010000141.1 Protein Homology CDS 44471 45202 . + 0 ID=cds-WP_011884203.1;Parent=gene-LDO38_RS16630;Dbxref=GenBank:WP_011884203.1;Name=WP_011884203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884203.1;locus_tag=LDO38_RS16630;product=putative type VI secretion system effector;protein_id=WP_011884203.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 45214 45465 . + . ID=gene-LDO38_RS16635;Name=LDO38_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16635;old_locus_tag=BVI2075_40040 NZ_CAJZAL010000141.1 Protein Homology CDS 45214 45465 . + 0 ID=cds-WP_011884205.1;Parent=gene-LDO38_RS16635;Dbxref=GenBank:WP_011884205.1;Name=WP_011884205.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899051.1;locus_tag=LDO38_RS16635;product=PAAR domain-containing protein;protein_id=WP_011884205.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 45517 47328 . - . ID=gene-LDO38_RS16640;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LDO38_RS16640;old_locus_tag=BVI2075_40041 NZ_CAJZAL010000141.1 Protein Homology CDS 45517 47328 . - 0 ID=cds-WP_045579288.1;Parent=gene-LDO38_RS16640;Dbxref=GenBank:WP_045579288.1;Name=WP_045579288.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884207.1;locus_tag=LDO38_RS16640;product=type VI secretion system baseplate subunit TssF;protein_id=WP_045579288.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 48263 49408 . + . ID=gene-LDO38_RS16645;Name=LDO38_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16645;old_locus_tag=BVI2075_40044 NZ_CAJZAL010000141.1 Protein Homology CDS 48263 49408 . + 0 ID=cds-WP_011884212.1;Parent=gene-LDO38_RS16645;Dbxref=GenBank:WP_011884212.1;Name=WP_011884212.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478783.1;locus_tag=LDO38_RS16645;product=porin;protein_id=WP_011884212.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 49623 50249 . + . ID=gene-LDO38_RS16650;Name=LDO38_RS16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16650;old_locus_tag=BVI2075_40045 NZ_CAJZAL010000141.1 Protein Homology CDS 49623 50249 . + 0 ID=cds-WP_014722788.1;Parent=gene-LDO38_RS16650;Dbxref=GenBank:WP_014722788.1;Name=WP_014722788.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476389.1;locus_tag=LDO38_RS16650;product=flavin reductase family protein;protein_id=WP_014722788.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 50522 51205 . + . ID=gene-LDO38_RS16655;Name=LDO38_RS16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16655;old_locus_tag=BVI2075_40046 NZ_CAJZAL010000141.1 Protein Homology CDS 50522 51205 . + 0 ID=cds-WP_059462919.1;Parent=gene-LDO38_RS16655;Dbxref=GenBank:WP_059462919.1;Name=WP_059462919.1;Ontology_term=GO:0006974,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722789.1;locus_tag=LDO38_RS16655;product=SOS response-associated peptidase family protein;protein_id=WP_059462919.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 51483 52913 . + . ID=gene-LDO38_RS16660;Name=LDO38_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16660;old_locus_tag=BVI2075_40048 NZ_CAJZAL010000141.1 Protein Homology CDS 51483 52913 . + 0 ID=cds-WP_034193226.1;Parent=gene-LDO38_RS16660;Dbxref=GenBank:WP_034193226.1;Name=WP_034193226.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656461.1;locus_tag=LDO38_RS16660;product=purine-cytosine permease family protein;protein_id=WP_034193226.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 52987 53943 . - . ID=gene-LDO38_RS16665;Name=LDO38_RS16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16665;old_locus_tag=BVI2075_40049 NZ_CAJZAL010000141.1 Protein Homology CDS 52987 53943 . - 0 ID=cds-WP_011884220.1;Parent=gene-LDO38_RS16665;Dbxref=GenBank:WP_011884220.1;Name=WP_011884220.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884220.1;locus_tag=LDO38_RS16665;product=LysR family transcriptional regulator;protein_id=WP_011884220.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 54139 55449 . + . ID=gene-LDO38_RS16670;Name=LDO38_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16670;old_locus_tag=BVI2075_40050 NZ_CAJZAL010000141.1 Protein Homology CDS 54139 55449 . + 0 ID=cds-WP_014722791.1;Parent=gene-LDO38_RS16670;Dbxref=GenBank:WP_014722791.1;Name=WP_014722791.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722791.1;locus_tag=LDO38_RS16670;product=MFS transporter;protein_id=WP_014722791.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 55583 56848 . + . ID=gene-LDO38_RS16675;Name=LDO38_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16675;old_locus_tag=BVI2075_40051 NZ_CAJZAL010000141.1 Protein Homology CDS 55583 56848 . + 0 ID=cds-WP_069238881.1;Parent=gene-LDO38_RS16675;Dbxref=GenBank:WP_069238881.1;Name=WP_069238881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753995.1;locus_tag=LDO38_RS16675;product=Zn-dependent hydrolase;protein_id=WP_069238881.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 56873 57895 . + . ID=gene-LDO38_RS16680;Name=LDO38_RS16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16680;old_locus_tag=BVI2075_40052 NZ_CAJZAL010000141.1 Protein Homology CDS 56873 57895 . + 0 ID=cds-WP_059462917.1;Parent=gene-LDO38_RS16680;Dbxref=GenBank:WP_059462917.1;Name=WP_059462917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545050.1;locus_tag=LDO38_RS16680;product=histone deacetylase family protein;protein_id=WP_059462917.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 58037 59242 . - . ID=gene-LDO38_RS16685;Name=LDO38_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16685;old_locus_tag=BVI2075_40053 NZ_CAJZAL010000141.1 Protein Homology CDS 58037 59242 . - 0 ID=cds-WP_014722793.1;Parent=gene-LDO38_RS16685;Dbxref=GenBank:WP_014722793.1;Name=WP_014722793.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363519.1;locus_tag=LDO38_RS16685;product=MFS transporter;protein_id=WP_014722793.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 59733 60644 . - . ID=gene-LDO38_RS16690;Name=LDO38_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16690;old_locus_tag=BVI2075_40054 NZ_CAJZAL010000141.1 Protein Homology CDS 59733 60644 . - 0 ID=cds-WP_045579282.1;Parent=gene-LDO38_RS16690;Dbxref=GenBank:WP_045579282.1;Name=WP_045579282.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753992.1;locus_tag=LDO38_RS16690;product=LysR family transcriptional regulator;protein_id=WP_045579282.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 60892 61812 . + . ID=gene-LDO38_RS16695;Name=LDO38_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16695;old_locus_tag=BVI2075_40055 NZ_CAJZAL010000141.1 Protein Homology CDS 60892 61812 . + 0 ID=cds-WP_014722795.1;Parent=gene-LDO38_RS16695;Dbxref=GenBank:WP_014722795.1;Name=WP_014722795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656468.1;locus_tag=LDO38_RS16695;product=pyridoxal-phosphate dependent enzyme;protein_id=WP_014722795.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq pseudogene 62582 63739 . - . ID=gene-LDO38_RS16700;Name=LDO38_RS16700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS16700;old_locus_tag=BVI2075_40057;partial=true;pseudo=true;start_range=.,62582 NZ_CAJZAL010000141.1 Protein Homology CDS 62582 63739 . - 0 ID=cds-LDO38_RS16700;Parent=gene-LDO38_RS16700;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351567.1;locus_tag=LDO38_RS16700;partial=true;product=DUF2242 domain-containing protein;pseudo=true;start_range=.,62582;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 63879 64772 . - . ID=gene-LDO38_RS16705;Name=LDO38_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16705;old_locus_tag=BVI2075_40058 NZ_CAJZAL010000141.1 Protein Homology CDS 63879 64772 . - 0 ID=cds-WP_034193230.1;Parent=gene-LDO38_RS16705;Dbxref=GenBank:WP_034193230.1;Name=WP_034193230.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351568.1;locus_tag=LDO38_RS16705;product=LysR family transcriptional regulator;protein_id=WP_034193230.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 64880 65635 . + . ID=gene-LDO38_RS16710;Name=LDO38_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16710;old_locus_tag=BVI2075_40059 NZ_CAJZAL010000141.1 Protein Homology CDS 64880 65635 . + 0 ID=cds-WP_011884237.1;Parent=gene-LDO38_RS16710;Dbxref=GenBank:WP_011884237.1;Name=WP_011884237.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363524.1;locus_tag=LDO38_RS16710;product=TerC family protein;protein_id=WP_011884237.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 65719 66054 . + . ID=gene-LDO38_RS16715;Name=LDO38_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16715;old_locus_tag=BVI2075_40060 NZ_CAJZAL010000141.1 Protein Homology CDS 65719 66054 . + 0 ID=cds-WP_059568523.1;Parent=gene-LDO38_RS16715;Dbxref=GenBank:WP_059568523.1;Name=WP_059568523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213706.1;locus_tag=LDO38_RS16715;product=zf-TFIIB domain-containing protein;protein_id=WP_059568523.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 66159 66575 . - . ID=gene-LDO38_RS16720;Name=LDO38_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16720;old_locus_tag=BVI2075_40061 NZ_CAJZAL010000141.1 Protein Homology CDS 66159 66575 . - 0 ID=cds-WP_059992381.1;Parent=gene-LDO38_RS16720;Dbxref=GenBank:WP_059992381.1;Name=WP_059992381.1;Ontology_term=GO:0009408,GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328222.1;locus_tag=LDO38_RS16720;product=Hsp20/alpha crystallin family protein;protein_id=WP_059992381.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 66592 67032 . - . ID=gene-LDO38_RS16725;Name=LDO38_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16725;old_locus_tag=BVI2075_40062 NZ_CAJZAL010000141.1 Protein Homology CDS 66592 67032 . - 0 ID=cds-WP_011884243.1;Parent=gene-LDO38_RS16725;Dbxref=GenBank:WP_011884243.1;Name=WP_011884243.1;Ontology_term=GO:0009408,GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897461.1;locus_tag=LDO38_RS16725;product=Hsp20/alpha crystallin family protein;protein_id=WP_011884243.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 67260 68108 . - . ID=gene-LDO38_RS16730;Name=LDO38_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16730;old_locus_tag=BVI2075_40063 NZ_CAJZAL010000141.1 Protein Homology CDS 67260 68108 . - 0 ID=cds-WP_011884244.1;Parent=gene-LDO38_RS16730;Dbxref=GenBank:WP_011884244.1;Name=WP_011884244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754565.1;locus_tag=LDO38_RS16730;product=LysR substrate-binding domain-containing protein;protein_id=WP_011884244.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 68437 68832 . + . ID=gene-LDO38_RS16735;Name=madL;gbkey=Gene;gene=madL;gene_biotype=protein_coding;locus_tag=LDO38_RS16735;old_locus_tag=BVI2075_40065 NZ_CAJZAL010000141.1 Protein Homology CDS 68437 68832 . + 0 ID=cds-WP_011884246.1;Parent=gene-LDO38_RS16735;Dbxref=GenBank:WP_011884246.1;Name=WP_011884246.1;Ontology_term=GO:0015849,GO:0005342;gbkey=CDS;gene=madL;go_function=organic acid transmembrane transporter activity|0005342||IEA;go_process=organic acid transport|0015849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897457.1;locus_tag=LDO38_RS16735;product=malonate transporter subunit MadL;protein_id=WP_011884246.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 68844 69611 . + . ID=gene-LDO38_RS16740;Name=madM;gbkey=Gene;gene=madM;gene_biotype=protein_coding;locus_tag=LDO38_RS16740;old_locus_tag=BVI2075_40066 NZ_CAJZAL010000141.1 Protein Homology CDS 68844 69611 . + 0 ID=cds-WP_059462300.1;Parent=gene-LDO38_RS16740;Dbxref=GenBank:WP_059462300.1;Name=WP_059462300.1;Ontology_term=GO:0044668;gbkey=CDS;gene=madM;go_function=sodium:malonate symporter activity|0044668||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363531.1;locus_tag=LDO38_RS16740;product=malonate transporter subunit MadM;protein_id=WP_059462300.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 69776 71422 . + . ID=gene-LDO38_RS16745;Name=mdcA;gbkey=Gene;gene=mdcA;gene_biotype=protein_coding;locus_tag=LDO38_RS16745;old_locus_tag=BVI2075_40067 NZ_CAJZAL010000141.1 Protein Homology CDS 69776 71422 . + 0 ID=cds-WP_059734052.1;Parent=gene-LDO38_RS16745;Dbxref=GenBank:WP_059734052.1;Name=WP_059734052.1;Ontology_term=GO:0006810,GO:0015451,GO:0016740;gbkey=CDS;gene=mdcA;go_function=decarboxylation-driven active transmembrane transporter activity|0015451||IEA,transferase activity|0016740||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764672.1;locus_tag=LDO38_RS16745;product=malonate decarboxylase subunit alpha;protein_id=WP_059734052.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 71433 71747 . + . ID=gene-LDO38_RS16750;Name=mdcC;gbkey=Gene;gene=mdcC;gene_biotype=protein_coding;locus_tag=LDO38_RS16750;old_locus_tag=BVI2075_40068 NZ_CAJZAL010000141.1 Protein Homology CDS 71433 71747 . + 0 ID=cds-WP_059462915.1;Parent=gene-LDO38_RS16750;Dbxref=GenBank:WP_059462915.1;Name=WP_059462915.1;gbkey=CDS;gene=mdcC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754569.1;locus_tag=LDO38_RS16750;product=malonate decarboxylase acyl carrier protein;protein_id=WP_059462915.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 71744 72685 . + . ID=gene-LDO38_RS16755;Name=LDO38_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16755;old_locus_tag=BVI2075_40069 NZ_CAJZAL010000141.1 Protein Homology CDS 71744 72685 . + 0 ID=cds-WP_060092296.1;Parent=gene-LDO38_RS16755;Dbxref=GenBank:WP_060092296.1;Name=WP_060092296.1;Ontology_term=GO:0005975,GO:0006633,GO:0003989,GO:0016831,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,carboxy-lyase activity|0016831||IEA;go_process=carbohydrate metabolic process|0005975||IEA,fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497631.1;locus_tag=LDO38_RS16755;product=biotin-independent malonate decarboxylase subunit beta;protein_id=WP_060092296.1;transl_table=11 NZ_CAJZAL010000141.1 RefSeq gene 72672 73160 . + . ID=gene-LDO38_RS16760;Name=LDO38_RS16760;end_range=73160,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16760;partial=true NZ_CAJZAL010000141.1 Protein Homology CDS 72672 73160 . + 0 ID=cds-WP_224056534.1;Parent=gene-LDO38_RS16760;Dbxref=GenBank:WP_224056534.1;Name=WP_224056534.1;end_range=73160,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722800.1;locus_tag=LDO38_RS16760;partial=true;product=biotin-independent malonate decarboxylase subunit gamma;protein_id=WP_224056534.1;transl_table=11 ##sequence-region NZ_CAJZAL010000142.1 1 47959 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000142.1 RefSeq region 1 47959 . + . ID=NZ_CAJZAL010000142.1:1..47959;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_40 NZ_CAJZAL010000142.1 RefSeq pseudogene 1 789 . - . ID=gene-LDO38_RS16765;Name=LDO38_RS16765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS16765;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000142.1 Protein Homology CDS 1 789 . - 0 ID=cds-LDO38_RS16765;Parent=gene-LDO38_RS16765;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339215.1;locus_tag=LDO38_RS16765;partial=true;product=phage tail protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 898 1905 . - . ID=gene-LDO38_RS16770;Name=hpnA;gbkey=Gene;gene=hpnA;gene_biotype=protein_coding;locus_tag=LDO38_RS16770;old_locus_tag=BVI2075_400002 NZ_CAJZAL010000142.1 Protein Homology CDS 898 1905 . - 0 ID=cds-WP_011881058.1;Parent=gene-LDO38_RS16770;Dbxref=GenBank:WP_011881058.1;Name=WP_011881058.1;Ontology_term=GO:0005975,GO:0016757;gbkey=CDS;gene=hpnA;go_function=glycosyltransferase activity|0016757||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255812.1;locus_tag=LDO38_RS16770;product=hopanoid-associated sugar epimerase;protein_id=WP_011881058.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 2096 2392 . + . ID=gene-LDO38_RS16775;Name=LDO38_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16775;old_locus_tag=BVI2075_400003 NZ_CAJZAL010000142.1 Protein Homology CDS 2096 2392 . + 0 ID=cds-WP_011881057.1;Parent=gene-LDO38_RS16775;Dbxref=GenBank:WP_011881057.1;Name=WP_011881057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367074.1;locus_tag=LDO38_RS16775;product=acylphosphatase;protein_id=WP_011881057.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 2405 3304 . + . ID=gene-LDO38_RS16780;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=LDO38_RS16780;old_locus_tag=BVI2075_400004 NZ_CAJZAL010000142.1 Protein Homology CDS 2405 3304 . + 0 ID=cds-WP_011881056.1;Parent=gene-LDO38_RS16780;Dbxref=GenBank:WP_011881056.1;Name=WP_011881056.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480293.1;locus_tag=LDO38_RS16780;product=EamA family transporter RarD;protein_id=WP_011881056.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 3662 4786 . + . ID=gene-LDO38_RS16785;Name=LDO38_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16785;old_locus_tag=BVI2075_400005 NZ_CAJZAL010000142.1 Protein Homology CDS 3662 4786 . + 0 ID=cds-WP_011881055.1;Parent=gene-LDO38_RS16785;Dbxref=GenBank:WP_011881055.1;Name=WP_011881055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216252.1;locus_tag=LDO38_RS16785;product=OpgC domain-containing protein;protein_id=WP_011881055.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 4859 5077 . - . ID=gene-LDO38_RS16790;Name=LDO38_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16790;old_locus_tag=BVI2075_400006 NZ_CAJZAL010000142.1 Protein Homology CDS 4859 5077 . - 0 ID=cds-WP_059475316.1;Parent=gene-LDO38_RS16790;Dbxref=GenBank:WP_059475316.1;Name=WP_059475316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490170.1;locus_tag=LDO38_RS16790;product=hypothetical protein;protein_id=WP_059475316.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 5196 6716 . - . ID=gene-LDO38_RS16795;Name=LDO38_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16795;old_locus_tag=BVI2075_400007 NZ_CAJZAL010000142.1 Protein Homology CDS 5196 6716 . - 0 ID=cds-WP_011881053.1;Parent=gene-LDO38_RS16795;Dbxref=GenBank:WP_011881053.1;Name=WP_011881053.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753629.1;locus_tag=LDO38_RS16795;product=peptide MFS transporter;protein_id=WP_011881053.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 7217 7798 . + . ID=gene-LDO38_RS16800;Name=LDO38_RS16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16800;old_locus_tag=BVI2075_400008 NZ_CAJZAL010000142.1 Protein Homology CDS 7217 7798 . + 0 ID=cds-WP_011881052.1;Parent=gene-LDO38_RS16800;Dbxref=GenBank:WP_011881052.1;Name=WP_011881052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900815.1;locus_tag=LDO38_RS16800;product=cupin domain-containing protein;protein_id=WP_011881052.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 7977 9590 . + . ID=gene-LDO38_RS16805;Name=LDO38_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16805;old_locus_tag=BVI2075_400009 NZ_CAJZAL010000142.1 Protein Homology CDS 7977 9590 . + 0 ID=cds-WP_069246402.1;Parent=gene-LDO38_RS16805;Dbxref=GenBank:WP_069246402.1;Name=WP_069246402.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659809.1;locus_tag=LDO38_RS16805;product=peptide ABC transporter substrate-binding protein;protein_id=WP_069246402.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 9602 10540 . + . ID=gene-LDO38_RS16810;Name=LDO38_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16810;old_locus_tag=BVI2075_400010 NZ_CAJZAL010000142.1 Protein Homology CDS 9602 10540 . + 0 ID=cds-WP_011881050.1;Parent=gene-LDO38_RS16810;Dbxref=GenBank:WP_011881050.1;Name=WP_011881050.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659808.1;locus_tag=LDO38_RS16810;product=ABC transporter permease subunit;protein_id=WP_011881050.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 10554 11456 . + . ID=gene-LDO38_RS16815;Name=LDO38_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16815;old_locus_tag=BVI2075_400011 NZ_CAJZAL010000142.1 Protein Homology CDS 10554 11456 . + 0 ID=cds-WP_011881049.1;Parent=gene-LDO38_RS16815;Dbxref=GenBank:WP_011881049.1;Name=WP_011881049.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900818.1;locus_tag=LDO38_RS16815;product=ABC transporter permease;protein_id=WP_011881049.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 11458 12450 . + . ID=gene-LDO38_RS16820;Name=LDO38_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16820;old_locus_tag=BVI2075_400012 NZ_CAJZAL010000142.1 Protein Homology CDS 11458 12450 . + 0 ID=cds-WP_011881048.1;Parent=gene-LDO38_RS16820;Dbxref=GenBank:WP_011881048.1;Name=WP_011881048.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353733.1;locus_tag=LDO38_RS16820;product=ABC transporter ATP-binding protein;protein_id=WP_011881048.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 12447 13481 . + . ID=gene-LDO38_RS16825;Name=LDO38_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16825;old_locus_tag=BVI2075_400013 NZ_CAJZAL010000142.1 Protein Homology CDS 12447 13481 . + 0 ID=cds-WP_045577618.1;Parent=gene-LDO38_RS16825;Dbxref=GenBank:WP_045577618.1;Name=WP_045577618.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881047.1;locus_tag=LDO38_RS16825;product=ABC transporter ATP-binding protein;protein_id=WP_045577618.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 13641 15119 . + . ID=gene-LDO38_RS16830;Name=LDO38_RS16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16830;old_locus_tag=BVI2075_400014 NZ_CAJZAL010000142.1 Protein Homology CDS 13641 15119 . + 0 ID=cds-WP_209149259.1;Parent=gene-LDO38_RS16830;Dbxref=GenBank:WP_209149259.1;Name=WP_209149259.1;Ontology_term=GO:0006811,GO:0015802,GO:0015288,GO:0009279,GO:0019867,GO:0046930;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,outer membrane|0019867||IEA,pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,basic amino acid transport|0015802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900821.1;locus_tag=LDO38_RS16830;product=OprD family porin;protein_id=WP_209149259.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 15190 16182 . - . ID=gene-LDO38_RS16835;Name=LDO38_RS16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16835;old_locus_tag=BVI2075_400015 NZ_CAJZAL010000142.1 Protein Homology CDS 15190 16182 . - 0 ID=cds-WP_011881045.1;Parent=gene-LDO38_RS16835;Dbxref=GenBank:WP_011881045.1;Name=WP_011881045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331030.1;locus_tag=LDO38_RS16835;product=DedA family protein/thiosulfate sulfurtransferase GlpE;protein_id=WP_011881045.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 16345 16614 . - . ID=gene-LDO38_RS16840;Name=LDO38_RS16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16840;old_locus_tag=BVI2075_400016 NZ_CAJZAL010000142.1 Protein Homology CDS 16345 16614 . - 0 ID=cds-WP_011881044.1;Parent=gene-LDO38_RS16840;Dbxref=GenBank:WP_011881044.1;Name=WP_011881044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480304.1;locus_tag=LDO38_RS16840;product=hypothetical protein;protein_id=WP_011881044.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 16850 19159 . - . ID=gene-LDO38_RS16845;Name=LDO38_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16845;old_locus_tag=BVI2075_400017 NZ_CAJZAL010000142.1 Protein Homology CDS 16850 19159 . - 0 ID=cds-WP_059568477.1;Parent=gene-LDO38_RS16845;Dbxref=GenBank:WP_059568477.1;Name=WP_059568477.1;Ontology_term=GO:0034480;gbkey=CDS;go_function=phosphatidylcholine phospholipase C activity|0034480||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367063.1;locus_tag=LDO38_RS16845;product=phosphocholine-specific phospholipase C;protein_id=WP_059568477.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 19650 19856 . - . ID=gene-LDO38_RS16850;Name=LDO38_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16850 NZ_CAJZAL010000142.1 GeneMarkS-2+ CDS 19650 19856 . - 0 ID=cds-WP_014724170.1;Parent=gene-LDO38_RS16850;Dbxref=GenBank:WP_014724170.1;Name=WP_014724170.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS16850;product=hypothetical protein;protein_id=WP_014724170.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 19884 21485 . + . ID=gene-LDO38_RS16855;Name=LDO38_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16855;old_locus_tag=BVI2075_400018 NZ_CAJZAL010000142.1 Protein Homology CDS 19884 21485 . + 0 ID=cds-WP_014724169.1;Parent=gene-LDO38_RS16855;Dbxref=GenBank:WP_014724169.1;Name=WP_014724169.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198270.1;locus_tag=LDO38_RS16855;product=thioredoxin family protein;protein_id=WP_014724169.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 21552 21833 . - . ID=gene-LDO38_RS16860;Name=LDO38_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16860;old_locus_tag=BVI2075_400019 NZ_CAJZAL010000142.1 Protein Homology CDS 21552 21833 . - 0 ID=cds-WP_045577620.1;Parent=gene-LDO38_RS16860;Dbxref=GenBank:WP_045577620.1;Name=WP_045577620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754161.1;locus_tag=LDO38_RS16860;product=DUF4148 domain-containing protein;protein_id=WP_045577620.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 22295 23698 . - . ID=gene-LDO38_RS16865;Name=LDO38_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16865;old_locus_tag=BVI2075_400021 NZ_CAJZAL010000142.1 Protein Homology CDS 22295 23698 . - 0 ID=cds-WP_011881038.1;Parent=gene-LDO38_RS16865;Dbxref=GenBank:WP_011881038.1;Name=WP_011881038.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757738.1;locus_tag=LDO38_RS16865;product=GntP family permease;protein_id=WP_011881038.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 24015 25499 . + . ID=gene-LDO38_RS16870;Name=LDO38_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16870;old_locus_tag=BVI2075_400023 NZ_CAJZAL010000142.1 Protein Homology CDS 24015 25499 . + 0 ID=cds-WP_059558489.1;Parent=gene-LDO38_RS16870;Dbxref=GenBank:WP_059558489.1;Name=WP_059558489.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548900.1;locus_tag=LDO38_RS16870;product=sigma-54 interaction domain-containing protein;protein_id=WP_059558489.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 25566 26102 . + . ID=gene-LDO38_RS16875;Name=LDO38_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16875;old_locus_tag=BVI2075_400024 NZ_CAJZAL010000142.1 Protein Homology CDS 25566 26102 . + 0 ID=cds-WP_069246405.1;Parent=gene-LDO38_RS16875;Dbxref=GenBank:WP_069246405.1;Name=WP_069246405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724166.1;locus_tag=LDO38_RS16875;product=BON domain-containing protein;protein_id=WP_069246405.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 26164 26448 . + . ID=gene-LDO38_RS30195;Name=LDO38_RS30195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30195 NZ_CAJZAL010000142.1 Protein Homology CDS 26164 26448 . + 0 ID=cds-WP_311732184.1;Parent=gene-LDO38_RS30195;Dbxref=GenBank:WP_311732184.1;Name=WP_311732184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493616.1;locus_tag=LDO38_RS30195;product=hypothetical protein;protein_id=WP_311732184.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 26551 26847 . + . ID=gene-LDO38_RS16880;Name=LDO38_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16880;old_locus_tag=BVI2075_400025 NZ_CAJZAL010000142.1 Protein Homology CDS 26551 26847 . + 0 ID=cds-WP_011881034.1;Parent=gene-LDO38_RS16880;Dbxref=GenBank:WP_011881034.1;Name=WP_011881034.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010110637.1;locus_tag=LDO38_RS16880;product=H-NS histone family protein;protein_id=WP_011881034.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 27419 29776 . + . ID=gene-LDO38_RS16885;Name=LDO38_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16885;old_locus_tag=BVI2075_400027 NZ_CAJZAL010000142.1 Protein Homology CDS 27419 29776 . + 0 ID=cds-WP_059462705.1;Parent=gene-LDO38_RS16885;Dbxref=GenBank:WP_059462705.1;Name=WP_059462705.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724165.1;locus_tag=LDO38_RS16885;product=GNAT family N-acetyltransferase;protein_id=WP_059462705.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 30492 31043 . - . ID=gene-LDO38_RS16890;Name=LDO38_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16890;old_locus_tag=BVI2075_400028 NZ_CAJZAL010000142.1 Protein Homology CDS 30492 31043 . - 0 ID=cds-WP_011881030.1;Parent=gene-LDO38_RS16890;Dbxref=GenBank:WP_011881030.1;Name=WP_011881030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881030.1;locus_tag=LDO38_RS16890;product=hypothetical protein;protein_id=WP_011881030.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 31296 32120 . - . ID=gene-LDO38_RS16895;Name=LDO38_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16895;old_locus_tag=BVI2075_400029 NZ_CAJZAL010000142.1 Protein Homology CDS 31296 32120 . - 0 ID=cds-WP_034193403.1;Parent=gene-LDO38_RS16895;Dbxref=GenBank:WP_034193403.1;Name=WP_034193403.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724163.1;locus_tag=LDO38_RS16895;product=IclR family transcriptional regulator;protein_id=WP_034193403.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 32559 33407 . + . ID=gene-LDO38_RS16900;Name=LDO38_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16900;old_locus_tag=BVI2075_400030 NZ_CAJZAL010000142.1 Protein Homology CDS 32559 33407 . + 0 ID=cds-WP_059734667.1;Parent=gene-LDO38_RS16900;Dbxref=GenBank:WP_059734667.1;Name=WP_059734667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353752.1;locus_tag=LDO38_RS16900;product=ureidoglycolate lyase;protein_id=WP_059734667.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 33763 35745 . - . ID=gene-LDO38_RS16905;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=LDO38_RS16905;old_locus_tag=BVI2075_400031 NZ_CAJZAL010000142.1 Protein Homology CDS 33763 35745 . - 0 ID=cds-WP_011881027.1;Parent=gene-LDO38_RS16905;Dbxref=GenBank:WP_011881027.1;Name=WP_011881027.1;Ontology_term=GO:0000160,GO:0006355,GO:0019629,GO:0000156,GO:0003677,GO:0005524,GO:0008134,GO:0043565,GO:0005737;gbkey=CDS;gene=prpR;go_component=cytoplasm|0005737||IEA;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481672.1;locus_tag=LDO38_RS16905;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_011881027.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 35917 36810 . + . ID=gene-LDO38_RS16910;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=LDO38_RS16910;old_locus_tag=BVI2075_400032 NZ_CAJZAL010000142.1 Protein Homology CDS 35917 36810 . + 0 ID=cds-WP_011881026.1;Parent=gene-LDO38_RS16910;Dbxref=GenBank:WP_011881026.1;Name=WP_011881026.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481649.1;locus_tag=LDO38_RS16910;product=methylisocitrate lyase;protein_id=WP_011881026.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 36859 38031 . + . ID=gene-LDO38_RS16915;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=LDO38_RS16915;old_locus_tag=BVI2075_400033 NZ_CAJZAL010000142.1 Protein Homology CDS 36859 38031 . + 0 ID=cds-WP_011881025.1;Parent=gene-LDO38_RS16915;Dbxref=GenBank:WP_011881025.1;Name=WP_011881025.1;Ontology_term=GO:0019679,GO:0036440,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate synthase activity|0036440||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757728.1;locus_tag=LDO38_RS16915;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_011881025.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 38113 40707 . + . ID=gene-LDO38_RS16920;Name=acnD;gbkey=Gene;gene=acnD;gene_biotype=protein_coding;locus_tag=LDO38_RS16920;old_locus_tag=BVI2075_400034 NZ_CAJZAL010000142.1 Protein Homology CDS 38113 40707 . + 0 ID=cds-WP_011881024.1;Parent=gene-LDO38_RS16920;Dbxref=GenBank:WP_011881024.1;Name=WP_011881024.1;Ontology_term=GO:0019679,GO:0047456;gbkey=CDS;gene=acnD;go_function=2-methylisocitrate dehydratase activity|0047456||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009981139.1;locus_tag=LDO38_RS16920;product=Fe/S-dependent 2-methylisocitrate dehydratase AcnD;protein_id=WP_011881024.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 40734 41924 . + . ID=gene-LDO38_RS16925;Name=prpF;gbkey=Gene;gene=prpF;gene_biotype=protein_coding;locus_tag=LDO38_RS16925;old_locus_tag=BVI2075_400035 NZ_CAJZAL010000142.1 Protein Homology CDS 40734 41924 . + 0 ID=cds-WP_059462702.1;Parent=gene-LDO38_RS16925;Dbxref=GenBank:WP_059462702.1;Name=WP_059462702.1;Ontology_term=GO:0019629,GO:0016853;gbkey=CDS;gene=prpF;go_function=isomerase activity|0016853||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090131.1;locus_tag=LDO38_RS16925;product=2-methylaconitate cis-trans isomerase PrpF;protein_id=WP_059462702.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 41966 42304 . + . ID=gene-LDO38_RS16930;Name=LDO38_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16930 NZ_CAJZAL010000142.1 GeneMarkS-2+ CDS 41966 42304 . + 0 ID=cds-WP_155624518.1;Parent=gene-LDO38_RS16930;Dbxref=GenBank:WP_155624518.1;Name=WP_155624518.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS16930;product=hypothetical protein;protein_id=WP_155624518.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 42344 42793 . + . ID=gene-LDO38_RS16935;Name=LDO38_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16935;old_locus_tag=BVI2075_400037 NZ_CAJZAL010000142.1 Protein Homology CDS 42344 42793 . + 0 ID=cds-WP_011881022.1;Parent=gene-LDO38_RS16935;Dbxref=GenBank:WP_011881022.1;Name=WP_011881022.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881022.1;locus_tag=LDO38_RS16935;product=response regulator transcription factor;protein_id=WP_011881022.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 42959 43867 . + . ID=gene-LDO38_RS16940;Name=LDO38_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16940;old_locus_tag=BVI2075_400038 NZ_CAJZAL010000142.1 Protein Homology CDS 42959 43867 . + 0 ID=cds-WP_124260151.1;Parent=gene-LDO38_RS16940;Dbxref=GenBank:WP_124260151.1;Name=WP_124260151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881021.1;locus_tag=LDO38_RS16940;product=hypothetical protein;protein_id=WP_124260151.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 44157 45218 . + . ID=gene-LDO38_RS16945;Name=LDO38_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16945;old_locus_tag=BVI2075_400040 NZ_CAJZAL010000142.1 Protein Homology CDS 44157 45218 . + 0 ID=cds-WP_011881020.1;Parent=gene-LDO38_RS16945;Dbxref=GenBank:WP_011881020.1;Name=WP_011881020.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881020.1;locus_tag=LDO38_RS16945;product=CaiB/BaiF CoA transferase family protein;protein_id=WP_011881020.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 45197 45493 . - . ID=gene-LDO38_RS16950;Name=LDO38_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16950;old_locus_tag=BVI2075_400041 NZ_CAJZAL010000142.1 GeneMarkS-2+ CDS 45197 45493 . - 0 ID=cds-WP_124260150.1;Parent=gene-LDO38_RS16950;Dbxref=GenBank:WP_124260150.1;Name=WP_124260150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS16950;product=hypothetical protein;protein_id=WP_124260150.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 45490 45933 . - . ID=gene-LDO38_RS16955;Name=LDO38_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16955;old_locus_tag=BVI2075_400042 NZ_CAJZAL010000142.1 Protein Homology CDS 45490 45933 . - 0 ID=cds-WP_014724157.1;Parent=gene-LDO38_RS16955;Dbxref=GenBank:WP_014724157.1;Name=WP_014724157.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900849.1;locus_tag=LDO38_RS16955;product=PaaI family thioesterase;protein_id=WP_014724157.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq gene 46193 47827 . + . ID=gene-LDO38_RS16960;Name=LDO38_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS16960;old_locus_tag=BVI2075_400043 NZ_CAJZAL010000142.1 Protein Homology CDS 46193 47827 . + 0 ID=cds-WP_046425000.1;Parent=gene-LDO38_RS16960;Dbxref=GenBank:WP_046425000.1;Name=WP_046425000.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548924.1;locus_tag=LDO38_RS16960;product=methyl-accepting chemotaxis protein;protein_id=WP_046425000.1;transl_table=11 NZ_CAJZAL010000142.1 RefSeq pseudogene 47800 47959 . - . ID=gene-LDO38_RS16965;Name=LDO38_RS16965;end_range=47959,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS16965;partial=true;pseudo=true NZ_CAJZAL010000142.1 Protein Homology CDS 47800 47959 . - 1 ID=cds-LDO38_RS16965;Parent=gene-LDO38_RS16965;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=47959,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397389.1;locus_tag=LDO38_RS16965;partial=true;product=AGE family epimerase/isomerase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000143.1 1 18166 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000143.1 RefSeq region 1 18166 . + . ID=NZ_CAJZAL010000143.1:1..18166;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_41 NZ_CAJZAL010000143.1 RefSeq pseudogene 1 113 . + . ID=gene-LDO38_RS16970;Name=LDO38_RS16970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS16970;old_locus_tag=BVI2075_410001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000143.1 Protein Homology CDS 1 113 . + 2 ID=cds-LDO38_RS16970;Parent=gene-LDO38_RS16970;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011286074.1;locus_tag=LDO38_RS16970;partial=true;product=elongation factor Tu;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000143.1 RefSeq gene 173 248 . + . ID=gene-LDO38_RS16975;Name=LDO38_RS16975;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS16975;old_locus_tag=BVI2075_TRNA7 NZ_CAJZAL010000143.1 tRNAscan-SE tRNA 173 248 . + . ID=rna-LDO38_RS16975;Parent=gene-LDO38_RS16975;anticodon=(pos:206..208);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS16975;product=tRNA-Trp NZ_CAJZAL010000143.1 tRNAscan-SE exon 173 248 . + . ID=exon-LDO38_RS16975-1;Parent=rna-LDO38_RS16975;anticodon=(pos:206..208);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS16975;product=tRNA-Trp NZ_CAJZAL010000143.1 RefSeq gene 291 671 . + . ID=gene-LDO38_RS16980;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=LDO38_RS16980;old_locus_tag=BVI2075_410002 NZ_CAJZAL010000143.1 Protein Homology CDS 291 671 . + 0 ID=cds-WP_059475040.1;Parent=gene-LDO38_RS16980;Dbxref=GenBank:WP_059475040.1;Name=WP_059475040.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734344.1;locus_tag=LDO38_RS16980;product=preprotein translocase subunit SecE;protein_id=WP_059475040.1;transl_table=11 NZ_CAJZAL010000143.1 RefSeq gene 673 1230 . + . ID=gene-LDO38_RS16985;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=LDO38_RS16985;old_locus_tag=BVI2075_410003 NZ_CAJZAL010000143.1 Protein Homology CDS 673 1230 . + 0 ID=cds-WP_006400672.1;Parent=gene-LDO38_RS16985;Dbxref=GenBank:WP_006400672.1;Name=WP_006400672.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013434764.1;locus_tag=LDO38_RS16985;product=transcription termination/antitermination protein NusG;protein_id=WP_006400672.1;transl_table=11 NZ_CAJZAL010000143.1 RefSeq gene 1371 1802 . + . ID=gene-LDO38_RS16990;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=LDO38_RS16990;old_locus_tag=BVI2075_410004 NZ_CAJZAL010000143.1 Protein Homology CDS 1371 1802 . + 0 ID=cds-WP_006753591.1;Parent=gene-LDO38_RS16990;Dbxref=GenBank:WP_006753591.1;Name=WP_006753591.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012251786.1;locus_tag=LDO38_RS16990;product=50S ribosomal protein L11;protein_id=WP_006753591.1;transl_table=11 NZ_CAJZAL010000143.1 RefSeq gene 1803 2501 . + . ID=gene-LDO38_RS16995;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=LDO38_RS16995;old_locus_tag=BVI2075_410005 NZ_CAJZAL010000143.1 Protein Homology CDS 1803 2501 . + 0 ID=cds-WP_011882997.1;Parent=gene-LDO38_RS16995;Dbxref=GenBank:WP_011882997.1;Name=WP_011882997.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407020.1;locus_tag=LDO38_RS16995;product=50S ribosomal protein L1;protein_id=WP_011882997.1;transl_table=11 NZ_CAJZAL010000143.1 RefSeq gene 2806 3303 . + . ID=gene-LDO38_RS17000;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=LDO38_RS17000;old_locus_tag=BVI2075_410007 NZ_CAJZAL010000143.1 Protein Homology CDS 2806 3303 . + 0 ID=cds-WP_014722280.1;Parent=gene-LDO38_RS17000;Dbxref=GenBank:WP_014722280.1;Name=WP_014722280.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898361.1;locus_tag=LDO38_RS17000;product=50S ribosomal protein L10;protein_id=WP_014722280.1;transl_table=11 NZ_CAJZAL010000143.1 RefSeq gene 3367 3738 . + . ID=gene-LDO38_RS17005;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=LDO38_RS17005;old_locus_tag=BVI2075_410008 NZ_CAJZAL010000143.1 Protein Homology CDS 3367 3738 . + 0 ID=cds-WP_011882999.1;Parent=gene-LDO38_RS17005;Dbxref=GenBank:WP_011882999.1;Name=WP_011882999.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029839.1;locus_tag=LDO38_RS17005;product=50S ribosomal protein L7/L12;protein_id=WP_011882999.1;transl_table=11 NZ_CAJZAL010000143.1 RefSeq gene 4115 8221 . + . ID=gene-LDO38_RS17010;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=LDO38_RS17010;old_locus_tag=BVI2075_410009 NZ_CAJZAL010000143.1 Protein Homology CDS 4115 8221 . + 0 ID=cds-WP_011883000.1;Parent=gene-LDO38_RS17010;Dbxref=GenBank:WP_011883000.1;Name=WP_011883000.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029840.1;locus_tag=LDO38_RS17010;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_011883000.1;transl_table=11 NZ_CAJZAL010000143.1 RefSeq gene 8243 12484 . + . ID=gene-LDO38_RS17015;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=LDO38_RS17015;old_locus_tag=BVI2075_410010 NZ_CAJZAL010000143.1 Protein Homology CDS 8243 12484 . + 0 ID=cds-WP_011883001.1;Parent=gene-LDO38_RS17015;Dbxref=GenBank:WP_011883001.1;Name=WP_011883001.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493357.1;locus_tag=LDO38_RS17015;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_011883001.1;transl_table=11 NZ_CAJZAL010000143.1 RefSeq gene 12726 14576 . + . ID=gene-LDO38_RS17020;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=LDO38_RS17020;old_locus_tag=BVI2075_410012 NZ_CAJZAL010000143.1 Protein Homology CDS 12726 14576 . + 0 ID=cds-WP_224056535.1;Parent=gene-LDO38_RS17020;Dbxref=GenBank:WP_224056535.1;Name=WP_224056535.1;Ontology_term=GO:0006310,GO:0009432,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696366.1;locus_tag=LDO38_RS17020;product=DNA helicase RecQ;protein_id=WP_224056535.1;transl_table=11 NZ_CAJZAL010000143.1 RefSeq gene 14848 15228 . + . ID=gene-LDO38_RS17025;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=LDO38_RS17025;old_locus_tag=BVI2075_410013 NZ_CAJZAL010000143.1 Protein Homology CDS 14848 15228 . + 0 ID=cds-WP_006400662.1;Parent=gene-LDO38_RS17025;Dbxref=GenBank:WP_006400662.1;Name=WP_006400662.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006998493.1;locus_tag=LDO38_RS17025;product=30S ribosomal protein S12;protein_id=WP_006400662.1;transl_table=11 NZ_CAJZAL010000143.1 RefSeq gene 15401 15871 . + . ID=gene-LDO38_RS17030;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=LDO38_RS17030;old_locus_tag=BVI2075_410014 NZ_CAJZAL010000143.1 Protein Homology CDS 15401 15871 . + 0 ID=cds-WP_006477195.1;Parent=gene-LDO38_RS17030;Dbxref=GenBank:WP_006477195.1;Name=WP_006477195.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008649176.1;locus_tag=LDO38_RS17030;product=30S ribosomal protein S7;protein_id=WP_006477195.1;transl_table=11 NZ_CAJZAL010000143.1 RefSeq gene 15994 18096 . + . ID=gene-LDO38_RS17035;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=LDO38_RS17035;old_locus_tag=BVI2075_410015 NZ_CAJZAL010000143.1 Protein Homology CDS 15994 18096 . + 0 ID=cds-WP_011883003.1;Parent=gene-LDO38_RS17035;Dbxref=GenBank:WP_011883003.1;Name=WP_011883003.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482929.1;locus_tag=LDO38_RS17035;product=elongation factor G;protein_id=WP_011883003.1;transl_table=11 ##sequence-region NZ_CAJZAL010000144.1 1 69914 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000144.1 RefSeq region 1 69914 . + . ID=NZ_CAJZAL010000144.1:1..69914;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_42 NZ_CAJZAL010000144.1 RefSeq gene 1 740 . - . ID=gene-LDO38_RS17040;Name=LDO38_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17040;partial=true;start_range=.,1 NZ_CAJZAL010000144.1 Protein Homology CDS 1 740 . - 0 ID=cds-WP_224056536.1;Parent=gene-LDO38_RS17040;Dbxref=GenBank:WP_224056536.1;Name=WP_224056536.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332130.1;locus_tag=LDO38_RS17040;partial=true;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_224056536.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 1042 2007 . - . ID=gene-LDO38_RS17045;Name=LDO38_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17045;old_locus_tag=BVI2075_420002 NZ_CAJZAL010000144.1 Protein Homology CDS 1042 2007 . - 0 ID=cds-WP_124259896.1;Parent=gene-LDO38_RS17045;Dbxref=GenBank:WP_124259896.1;Name=WP_124259896.1;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006475965.1;locus_tag=LDO38_RS17045;product=NAD(P)-dependent oxidoreductase;protein_id=WP_124259896.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 2013 3293 . - . ID=gene-LDO38_RS17050;Name=LDO38_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17050;old_locus_tag=BVI2075_420003 NZ_CAJZAL010000144.1 Protein Homology CDS 2013 3293 . - 0 ID=cds-WP_060043899.1;Parent=gene-LDO38_RS17050;Dbxref=GenBank:WP_060043899.1;Name=WP_060043899.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890952.1;locus_tag=LDO38_RS17050;product=MFS transporter;protein_id=WP_060043899.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 3457 4458 . - . ID=gene-LDO38_RS17055;Name=LDO38_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17055;old_locus_tag=BVI2075_420004 NZ_CAJZAL010000144.1 Protein Homology CDS 3457 4458 . - 0 ID=cds-WP_059461759.1;Parent=gene-LDO38_RS17055;Dbxref=GenBank:WP_059461759.1;Name=WP_059461759.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764274.1;locus_tag=LDO38_RS17055;product=sugar kinase;protein_id=WP_059461759.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 4487 5251 . - . ID=gene-LDO38_RS17060;Name=LDO38_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17060;old_locus_tag=BVI2075_420005 NZ_CAJZAL010000144.1 Protein Homology CDS 4487 5251 . - 0 ID=cds-WP_059461760.1;Parent=gene-LDO38_RS17060;Dbxref=GenBank:WP_059461760.1;Name=WP_059461760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754793.1;locus_tag=LDO38_RS17060;product=xylose isomerase;protein_id=WP_059461760.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 5506 6399 . - . ID=gene-LDO38_RS17065;Name=LDO38_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17065;old_locus_tag=BVI2075_420007 NZ_CAJZAL010000144.1 Protein Homology CDS 5506 6399 . - 0 ID=cds-WP_059461761.1;Parent=gene-LDO38_RS17065;Dbxref=GenBank:WP_059461761.1;Name=WP_059461761.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723070.1;locus_tag=LDO38_RS17065;product=LysR family transcriptional regulator;protein_id=WP_059461761.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 6510 7583 . + . ID=gene-LDO38_RS17070;Name=LDO38_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17070;old_locus_tag=BVI2075_420008 NZ_CAJZAL010000144.1 Protein Homology CDS 6510 7583 . + 0 ID=cds-WP_011884910.1;Parent=gene-LDO38_RS17070;Dbxref=GenBank:WP_011884910.1;Name=WP_011884910.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549751.1;locus_tag=LDO38_RS17070;product=YeiH family protein;protein_id=WP_011884910.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 7699 9432 . + . ID=gene-LDO38_RS17075;Name=LDO38_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17075;old_locus_tag=BVI2075_420009 NZ_CAJZAL010000144.1 Protein Homology CDS 7699 9432 . + 0 ID=cds-WP_034193153.1;Parent=gene-LDO38_RS17075;Dbxref=GenBank:WP_034193153.1;Name=WP_034193153.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467624.1;locus_tag=LDO38_RS17075;product=ClcB-like voltage-gated chloride channel protein;protein_id=WP_034193153.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 9626 10246 . - . ID=gene-LDO38_RS17080;Name=LDO38_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17080;old_locus_tag=BVI2075_420010 NZ_CAJZAL010000144.1 Protein Homology CDS 9626 10246 . - 0 ID=cds-WP_011884912.1;Parent=gene-LDO38_RS17080;Dbxref=GenBank:WP_011884912.1;Name=WP_011884912.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491184.1;locus_tag=LDO38_RS17080;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011884912.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 10437 11546 . + . ID=gene-LDO38_RS17085;Name=LDO38_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17085;old_locus_tag=BVI2075_420011 NZ_CAJZAL010000144.1 Protein Homology CDS 10437 11546 . + 0 ID=cds-WP_059462612.1;Parent=gene-LDO38_RS17085;Dbxref=GenBank:WP_059462612.1;Name=WP_059462612.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538244.1;locus_tag=LDO38_RS17085;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_059462612.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 11543 14692 . + . ID=gene-LDO38_RS17090;Name=LDO38_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17090;old_locus_tag=BVI2075_420012 NZ_CAJZAL010000144.1 Protein Homology CDS 11543 14692 . + 0 ID=cds-WP_011884914.1;Parent=gene-LDO38_RS17090;Dbxref=GenBank:WP_011884914.1;Name=WP_011884914.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352187.1;locus_tag=LDO38_RS17090;product=efflux RND transporter permease subunit;protein_id=WP_011884914.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 14695 16278 . + . ID=gene-LDO38_RS17095;Name=LDO38_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17095;old_locus_tag=BVI2075_420013 NZ_CAJZAL010000144.1 Protein Homology CDS 14695 16278 . + 0 ID=cds-WP_059740913.1;Parent=gene-LDO38_RS17095;Dbxref=GenBank:WP_059740913.1;Name=WP_059740913.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884915.1;locus_tag=LDO38_RS17095;product=efflux transporter outer membrane subunit;protein_id=WP_059740913.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 16404 17435 . + . ID=gene-LDO38_RS17100;Name=LDO38_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17100;old_locus_tag=BVI2075_420014 NZ_CAJZAL010000144.1 Protein Homology CDS 16404 17435 . + 0 ID=cds-WP_059453832.1;Parent=gene-LDO38_RS17100;Dbxref=GenBank:WP_059453832.1;Name=WP_059453832.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884916.1;locus_tag=LDO38_RS17100;product=MerR family transcriptional regulator;protein_id=WP_059453832.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 17478 18863 . - . ID=gene-LDO38_RS17105;Name=LDO38_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17105;old_locus_tag=BVI2075_420015 NZ_CAJZAL010000144.1 Protein Homology CDS 17478 18863 . - 0 ID=cds-WP_059462609.1;Parent=gene-LDO38_RS17105;Dbxref=GenBank:WP_059462609.1;Name=WP_059462609.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884917.1;locus_tag=LDO38_RS17105;product=sigma-54 interaction domain-containing protein;protein_id=WP_059462609.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 19113 19997 . + . ID=gene-LDO38_RS17110;Name=LDO38_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17110;old_locus_tag=BVI2075_420017 NZ_CAJZAL010000144.1 Protein Homology CDS 19113 19997 . + 0 ID=cds-WP_043291063.1;Parent=gene-LDO38_RS17110;Dbxref=GenBank:WP_043291063.1;Name=WP_043291063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328577.1;locus_tag=LDO38_RS17110;product=MBL fold metallo-hydrolase;protein_id=WP_043291063.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 20040 21707 . + . ID=gene-LDO38_RS17115;Name=LDO38_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17115;old_locus_tag=BVI2075_420018 NZ_CAJZAL010000144.1 Protein Homology CDS 20040 21707 . + 0 ID=cds-WP_034193157.1;Parent=gene-LDO38_RS17115;Dbxref=GenBank:WP_034193157.1;Name=WP_034193157.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399997.1;locus_tag=LDO38_RS17115;product=bifunctional protein tyrosine phosphatase family protein/NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_034193157.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 21726 22532 . + . ID=gene-LDO38_RS17120;Name=LDO38_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17120;old_locus_tag=BVI2075_420019 NZ_CAJZAL010000144.1 Protein Homology CDS 21726 22532 . + 0 ID=cds-WP_011884920.1;Parent=gene-LDO38_RS17120;Dbxref=GenBank:WP_011884920.1;Name=WP_011884920.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006475949.1;locus_tag=LDO38_RS17120;product=sulfite exporter TauE/SafE family protein;protein_id=WP_011884920.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 22640 23461 . - . ID=gene-LDO38_RS17125;Name=LDO38_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17125;old_locus_tag=BVI2075_420020 NZ_CAJZAL010000144.1 Protein Homology CDS 22640 23461 . - 0 ID=cds-WP_011884921.1;Parent=gene-LDO38_RS17125;Dbxref=GenBank:WP_011884921.1;Name=WP_011884921.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884921.1;locus_tag=LDO38_RS17125;product=ABC transporter permease subunit;protein_id=WP_011884921.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 23458 24387 . - . ID=gene-LDO38_RS17130;Name=LDO38_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17130;old_locus_tag=BVI2075_420021 NZ_CAJZAL010000144.1 Protein Homology CDS 23458 24387 . - 0 ID=cds-WP_011884922.1;Parent=gene-LDO38_RS17130;Dbxref=GenBank:WP_011884922.1;Name=WP_011884922.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884922.1;locus_tag=LDO38_RS17130;product=ABC transporter permease subunit;protein_id=WP_011884922.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 24384 25544 . - . ID=gene-LDO38_RS17135;Name=LDO38_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17135;old_locus_tag=BVI2075_420022 NZ_CAJZAL010000144.1 Protein Homology CDS 24384 25544 . - 0 ID=cds-WP_011884923.1;Parent=gene-LDO38_RS17135;Dbxref=GenBank:WP_011884923.1;Name=WP_011884923.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115150.1;locus_tag=LDO38_RS17135;product=ABC transporter ATP-binding protein;protein_id=WP_011884923.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 25631 26725 . - . ID=gene-LDO38_RS17140;Name=LDO38_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17140;old_locus_tag=BVI2075_420023 NZ_CAJZAL010000144.1 Protein Homology CDS 25631 26725 . - 0 ID=cds-WP_011884924.1;Parent=gene-LDO38_RS17140;Dbxref=GenBank:WP_011884924.1;Name=WP_011884924.1;Ontology_term=GO:0015846,GO:0019808,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004266745.1;locus_tag=LDO38_RS17140;product=polyamine ABC transporter substrate-binding protein;protein_id=WP_011884924.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 27234 27437 . + . ID=gene-LDO38_RS17145;Name=LDO38_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17145;old_locus_tag=BVI2075_420025 NZ_CAJZAL010000144.1 Protein Homology CDS 27234 27437 . + 0 ID=cds-WP_011884925.1;Parent=gene-LDO38_RS17145;Dbxref=GenBank:WP_011884925.1;Name=WP_011884925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009973325.1;locus_tag=LDO38_RS17145;product=DUF1289 domain-containing protein;protein_id=WP_011884925.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 27651 28292 . - . ID=gene-LDO38_RS17150;Name=LDO38_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17150;old_locus_tag=BVI2075_420026 NZ_CAJZAL010000144.1 Protein Homology CDS 27651 28292 . - 0 ID=cds-WP_011884926.1;Parent=gene-LDO38_RS17150;Dbxref=GenBank:WP_011884926.1;Name=WP_011884926.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328582.1;locus_tag=LDO38_RS17150;product=OmpW/AlkL family protein;protein_id=WP_011884926.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 28358 29548 . - . ID=gene-LDO38_RS17155;Name=LDO38_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17155;old_locus_tag=BVI2075_420027 NZ_CAJZAL010000144.1 Protein Homology CDS 28358 29548 . - 0 ID=cds-WP_011884927.1;Parent=gene-LDO38_RS17155;Dbxref=GenBank:WP_011884927.1;Name=WP_011884927.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328583.1;locus_tag=LDO38_RS17155;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_011884927.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 29672 31108 . - . ID=gene-LDO38_RS17160;Name=LDO38_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17160;old_locus_tag=BVI2075_420028 NZ_CAJZAL010000144.1 Protein Homology CDS 29672 31108 . - 0 ID=cds-WP_059461766.1;Parent=gene-LDO38_RS17160;Dbxref=GenBank:WP_059461766.1;Name=WP_059461766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760071.1;locus_tag=LDO38_RS17160;product=aldehyde dehydrogenase family protein;protein_id=WP_059461766.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 31368 31733 . + . ID=gene-LDO38_RS17165;Name=LDO38_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17165;old_locus_tag=BVI2075_420029 NZ_CAJZAL010000144.1 Protein Homology CDS 31368 31733 . + 0 ID=cds-WP_011884929.1;Parent=gene-LDO38_RS17165;Dbxref=GenBank:WP_011884929.1;Name=WP_011884929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399981.1;locus_tag=LDO38_RS17165;product=hypothetical protein;protein_id=WP_011884929.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 31749 32213 . - . ID=gene-LDO38_RS17170;Name=LDO38_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17170;old_locus_tag=BVI2075_420031 NZ_CAJZAL010000144.1 Protein Homology CDS 31749 32213 . - 0 ID=cds-WP_011884930.1;Parent=gene-LDO38_RS17170;Dbxref=GenBank:WP_011884930.1;Name=WP_011884930.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753484.1;locus_tag=LDO38_RS17170;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011884930.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 32347 33393 . + . ID=gene-LDO38_RS17175;Name=LDO38_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17175;old_locus_tag=BVI2075_420032 NZ_CAJZAL010000144.1 Protein Homology CDS 32347 33393 . + 0 ID=cds-WP_034193160.1;Parent=gene-LDO38_RS17175;Dbxref=GenBank:WP_034193160.1;Name=WP_034193160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753482.1;locus_tag=LDO38_RS17175;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_034193160.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq pseudogene 33505 33702 . - . ID=gene-LDO38_RS17180;Name=LDO38_RS17180;end_range=33702,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS17180;old_locus_tag=BVI2075_420033;partial=true;pseudo=true;start_range=.,33505 NZ_CAJZAL010000144.1 Protein Homology CDS 33505 33702 . - 0 ID=cds-LDO38_RS17180;Parent=gene-LDO38_RS17180;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=33702,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611314.1;locus_tag=LDO38_RS17180;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,33505;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 33718 34767 . - . ID=gene-LDO38_RS17185;Name=LDO38_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17185;old_locus_tag=BVI2075_420034 NZ_CAJZAL010000144.1 Protein Homology CDS 33718 34767 . - 0 ID=cds-WP_041493840.1;Parent=gene-LDO38_RS17185;Dbxref=GenBank:WP_041493840.1;Name=WP_041493840.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699837.1;locus_tag=LDO38_RS17185;product=IS110 family transposase;protein_id=WP_041493840.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq pseudogene 34981 35945 . - . ID=gene-LDO38_RS17190;Name=LDO38_RS17190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS17190;partial=true;pseudo=true;start_range=.,34981 NZ_CAJZAL010000144.1 Protein Homology CDS 34981 35945 . - 0 ID=cds-LDO38_RS17190;Parent=gene-LDO38_RS17190;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611314.1;locus_tag=LDO38_RS17190;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,34981;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 36013 36588 . - . ID=gene-LDO38_RS17195;Name=LDO38_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17195 NZ_CAJZAL010000144.1 Protein Homology CDS 36013 36588 . - 0 ID=cds-WP_224020216.1;Parent=gene-LDO38_RS17195;Dbxref=GenBank:WP_224020216.1;Name=WP_224020216.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017182.6;locus_tag=LDO38_RS17195;product=DUF746 domain-containing protein;protein_id=WP_224020216.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 36693 36914 . - . ID=gene-LDO38_RS17200;Name=LDO38_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17200;old_locus_tag=BVI2075_420038 NZ_CAJZAL010000144.1 GeneMarkS-2+ CDS 36693 36914 . - 0 ID=cds-WP_034193163.1;Parent=gene-LDO38_RS17200;Dbxref=GenBank:WP_034193163.1;Name=WP_034193163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS17200;product=hypothetical protein;protein_id=WP_034193163.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 36939 38606 . - . ID=gene-LDO38_RS17205;Name=LDO38_RS17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17205;old_locus_tag=BVI2075_420039 NZ_CAJZAL010000144.1 Protein Homology CDS 36939 38606 . - 0 ID=cds-WP_224056538.1;Parent=gene-LDO38_RS17205;Dbxref=GenBank:WP_224056538.1;Name=WP_224056538.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689922.1;locus_tag=LDO38_RS17205;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_224056538.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 38690 39028 . - . ID=gene-LDO38_RS17210;Name=LDO38_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17210;old_locus_tag=BVI2075_420040 NZ_CAJZAL010000144.1 Protein Homology CDS 38690 39028 . - 0 ID=cds-WP_059461767.1;Parent=gene-LDO38_RS17210;Dbxref=GenBank:WP_059461767.1;Name=WP_059461767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396454.1;locus_tag=LDO38_RS17210;product=small multidrug resistance protein;protein_id=WP_059461767.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 39025 40215 . - . ID=gene-LDO38_RS17215;Name=LDO38_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17215;old_locus_tag=BVI2075_420041 NZ_CAJZAL010000144.1 Protein Homology CDS 39025 40215 . - 0 ID=cds-WP_124260198.1;Parent=gene-LDO38_RS17215;Dbxref=GenBank:WP_124260198.1;Name=WP_124260198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758112.1;locus_tag=LDO38_RS17215;product=hypothetical protein;protein_id=WP_124260198.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 40230 41669 . - . ID=gene-LDO38_RS17220;Name=LDO38_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17220;old_locus_tag=BVI2075_420042 NZ_CAJZAL010000144.1 Protein Homology CDS 40230 41669 . - 0 ID=cds-WP_059461769.1;Parent=gene-LDO38_RS17220;Dbxref=GenBank:WP_059461769.1;Name=WP_059461769.1;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406101.1;locus_tag=LDO38_RS17220;product=UbiA family prenyltransferase;protein_id=WP_059461769.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 41686 41982 . - . ID=gene-LDO38_RS17225;Name=LDO38_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17225 NZ_CAJZAL010000144.1 GeneMarkS-2+ CDS 41686 41982 . - 0 ID=cds-WP_124260197.1;Parent=gene-LDO38_RS17225;Dbxref=GenBank:WP_124260197.1;Name=WP_124260197.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS17225;product=hypothetical protein;protein_id=WP_124260197.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 42012 42365 . - . ID=gene-LDO38_RS17230;Name=LDO38_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17230;old_locus_tag=BVI2075_420045 NZ_CAJZAL010000144.1 Protein Homology CDS 42012 42365 . - 0 ID=cds-WP_059461770.1;Parent=gene-LDO38_RS17230;Dbxref=GenBank:WP_059461770.1;Name=WP_059461770.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026924.6;locus_tag=LDO38_RS17230;product=Imm8 family immunity protein;protein_id=WP_059461770.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 42362 51841 . - . ID=gene-LDO38_RS17235;Name=LDO38_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17235;old_locus_tag=BVI2075_420046 NZ_CAJZAL010000144.1 Protein Homology CDS 42362 51841 . - 0 ID=cds-WP_124260196.1;Parent=gene-LDO38_RS17235;Dbxref=GenBank:WP_124260196.1;Name=WP_124260196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759145.1;locus_tag=LDO38_RS17235;product=hemagglutinin repeat-containing protein;protein_id=WP_124260196.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 52731 54323 . - . ID=gene-LDO38_RS17240;Name=LDO38_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17240;old_locus_tag=BVI2075_420047 NZ_CAJZAL010000144.1 Protein Homology CDS 52731 54323 . - 0 ID=cds-WP_014723081.1;Parent=gene-LDO38_RS17240;Dbxref=GenBank:WP_014723081.1;Name=WP_014723081.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485248.1;locus_tag=LDO38_RS17240;product=ABC-F family ATPase;protein_id=WP_014723081.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 54452 56722 . - . ID=gene-LDO38_RS17245;Name=LDO38_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17245;old_locus_tag=BVI2075_420048 NZ_CAJZAL010000144.1 Protein Homology CDS 54452 56722 . - 0 ID=cds-WP_124260195.1;Parent=gene-LDO38_RS17245;Dbxref=GenBank:WP_124260195.1;Name=WP_124260195.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656991.1;locus_tag=LDO38_RS17245;product=AsmA family protein;protein_id=WP_124260195.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 56875 57576 . + . ID=gene-LDO38_RS17250;Name=LDO38_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17250;old_locus_tag=BVI2075_420050 NZ_CAJZAL010000144.1 Protein Homology CDS 56875 57576 . + 0 ID=cds-WP_011884934.1;Parent=gene-LDO38_RS17250;Dbxref=GenBank:WP_011884934.1;Name=WP_011884934.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328605.1;locus_tag=LDO38_RS17250;product=ABC transporter ATP-binding protein;protein_id=WP_011884934.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 57573 58376 . + . ID=gene-LDO38_RS17255;Name=LDO38_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17255;old_locus_tag=BVI2075_420049 NZ_CAJZAL010000144.1 Protein Homology CDS 57573 58376 . + 0 ID=cds-WP_011884935.1;Parent=gene-LDO38_RS17255;Dbxref=GenBank:WP_011884935.1;Name=WP_011884935.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213278.1;locus_tag=LDO38_RS17255;product=ABC transporter permease;protein_id=WP_011884935.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 58567 59118 . - . ID=gene-LDO38_RS17260;Name=LDO38_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17260;old_locus_tag=BVI2075_420051 NZ_CAJZAL010000144.1 Protein Homology CDS 58567 59118 . - 0 ID=cds-WP_014723082.1;Parent=gene-LDO38_RS17260;Dbxref=GenBank:WP_014723082.1;Name=WP_014723082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363968.1;locus_tag=LDO38_RS17260;product=DUF6013 family protein;protein_id=WP_014723082.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 59286 60302 . - . ID=gene-LDO38_RS17265;Name=LDO38_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17265;old_locus_tag=BVI2075_420052 NZ_CAJZAL010000144.1 Protein Homology CDS 59286 60302 . - 0 ID=cds-WP_034193202.1;Parent=gene-LDO38_RS17265;Dbxref=GenBank:WP_034193202.1;Name=WP_034193202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497183.1;locus_tag=LDO38_RS17265;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_034193202.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 60426 61367 . + . ID=gene-LDO38_RS17270;Name=LDO38_RS17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17270;old_locus_tag=BVI2075_420053 NZ_CAJZAL010000144.1 Protein Homology CDS 60426 61367 . + 0 ID=cds-WP_014723084.1;Parent=gene-LDO38_RS17270;Dbxref=GenBank:WP_014723084.1;Name=WP_014723084.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213274.1;locus_tag=LDO38_RS17270;product=LysR family transcriptional regulator;protein_id=WP_014723084.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 61504 62349 . + . ID=gene-LDO38_RS17275;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=LDO38_RS17275;old_locus_tag=BVI2075_420054 NZ_CAJZAL010000144.1 Protein Homology CDS 61504 62349 . + 0 ID=cds-WP_014723085.1;Parent=gene-LDO38_RS17275;Dbxref=GenBank:WP_014723085.1;Name=WP_014723085.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006475922.1;locus_tag=LDO38_RS17275;product=phosphoserine phosphatase SerB;protein_id=WP_014723085.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 62434 63618 . - . ID=gene-LDO38_RS17280;Name=LDO38_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17280;old_locus_tag=BVI2075_420055 NZ_CAJZAL010000144.1 Protein Homology CDS 62434 63618 . - 0 ID=cds-WP_124260194.1;Parent=gene-LDO38_RS17280;Dbxref=GenBank:WP_124260194.1;Name=WP_124260194.1;Ontology_term=GO:0019346,GO:0047804;gbkey=CDS;go_function=cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884940.1;locus_tag=LDO38_RS17280;product=cystathionine beta-lyase;protein_id=WP_124260194.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 63728 64327 . - . ID=gene-LDO38_RS17285;Name=LDO38_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17285;old_locus_tag=BVI2075_420056 NZ_CAJZAL010000144.1 Protein Homology CDS 63728 64327 . - 0 ID=cds-WP_249176620.1;Parent=gene-LDO38_RS17285;Dbxref=GenBank:WP_249176620.1;Name=WP_249176620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192985.1;locus_tag=LDO38_RS17285;product=hypothetical protein;protein_id=WP_249176620.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 64333 65259 . - . ID=gene-LDO38_RS17290;Name=LDO38_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17290;old_locus_tag=BVI2075_420057 NZ_CAJZAL010000144.1 Protein Homology CDS 64333 65259 . - 0 ID=cds-WP_124260193.1;Parent=gene-LDO38_RS17290;Dbxref=GenBank:WP_124260193.1;Name=WP_124260193.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485268.1;locus_tag=LDO38_RS17290;product=sugar kinase;protein_id=WP_124260193.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 65263 66624 . - . ID=gene-LDO38_RS17295;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=LDO38_RS17295;old_locus_tag=BVI2075_420058 NZ_CAJZAL010000144.1 Protein Homology CDS 65263 66624 . - 0 ID=cds-WP_059461775.1;Parent=gene-LDO38_RS17295;Dbxref=GenBank:WP_059461775.1;Name=WP_059461775.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896933.1;locus_tag=LDO38_RS17295;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_059461775.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 66851 67105 . + . ID=gene-LDO38_RS17300;Name=LDO38_RS17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17300;old_locus_tag=BVI2075_420059 NZ_CAJZAL010000144.1 Protein Homology CDS 66851 67105 . + 0 ID=cds-WP_034193171.1;Parent=gene-LDO38_RS17300;Dbxref=GenBank:WP_034193171.1;Name=WP_034193171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884944.1;locus_tag=LDO38_RS17300;product=hypothetical protein;protein_id=WP_034193171.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 67188 67754 . - . ID=gene-LDO38_RS17305;Name=phaR;gbkey=Gene;gene=phaR;gene_biotype=protein_coding;locus_tag=LDO38_RS17305;old_locus_tag=BVI2075_420060 NZ_CAJZAL010000144.1 Protein Homology CDS 67188 67754 . - 0 ID=cds-WP_011884945.1;Parent=gene-LDO38_RS17305;Dbxref=GenBank:WP_011884945.1;Name=WP_011884945.1;Ontology_term=GO:0006355;gbkey=CDS;gene=phaR;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192676.1;locus_tag=LDO38_RS17305;product=polyhydroxyalkanoate synthesis repressor PhaR;protein_id=WP_011884945.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 67873 68613 . - . ID=gene-LDO38_RS17310;Name=LDO38_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17310;old_locus_tag=BVI2075_420061 NZ_CAJZAL010000144.1 Protein Homology CDS 67873 68613 . - 0 ID=cds-WP_011884946.1;Parent=gene-LDO38_RS17310;Dbxref=GenBank:WP_011884946.1;Name=WP_011884946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007586437.1;locus_tag=LDO38_RS17310;product=3-ketoacyl-ACP reductase;protein_id=WP_011884946.1;transl_table=11 NZ_CAJZAL010000144.1 RefSeq gene 68734 69914 . - . ID=gene-LDO38_RS17315;Name=LDO38_RS17315;end_range=69914,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17315;old_locus_tag=BVI2075_420062;partial=true NZ_CAJZAL010000144.1 Protein Homology CDS 68734 69914 . - 2 ID=cds-WP_224056537.1;Parent=gene-LDO38_RS17315;Dbxref=GenBank:WP_224056537.1;Name=WP_224056537.1;Ontology_term=GO:0003985;end_range=69914,.;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884947.1;locus_tag=LDO38_RS17315;partial=true;product=acetyl-CoA C-acetyltransferase;protein_id=WP_224056537.1;transl_table=11 ##sequence-region NZ_CAJZAL010000145.1 1 117154 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000145.1 RefSeq region 1 117154 . + . ID=NZ_CAJZAL010000145.1:1..117154;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_43 NZ_CAJZAL010000145.1 RefSeq gene 1 1549 . - . ID=gene-LDO38_RS17320;Name=LDO38_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17320;partial=true;start_range=.,1 NZ_CAJZAL010000145.1 Protein Homology CDS 1 1549 . - 0 ID=cds-WP_224056539.1;Parent=gene-LDO38_RS17320;Dbxref=GenBank:WP_224056539.1;Name=WP_224056539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881872.1;locus_tag=LDO38_RS17320;partial=true;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=WP_224056539.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 1563 3353 . - . ID=gene-LDO38_RS17325;Name=LDO38_RS17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17325;old_locus_tag=BVI2075_430002 NZ_CAJZAL010000145.1 Protein Homology CDS 1563 3353 . - 0 ID=cds-WP_059462355.1;Parent=gene-LDO38_RS17325;Dbxref=GenBank:WP_059462355.1;Name=WP_059462355.1;Ontology_term=GO:0006631,GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904408.1;locus_tag=LDO38_RS17325;product=acyl-CoA dehydrogenase;protein_id=WP_059462355.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 3478 4722 . - . ID=gene-LDO38_RS17330;Name=LDO38_RS17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17330;old_locus_tag=BVI2075_430004 NZ_CAJZAL010000145.1 Protein Homology CDS 3478 4722 . - 0 ID=cds-WP_011881870.1;Parent=gene-LDO38_RS17330;Dbxref=GenBank:WP_011881870.1;Name=WP_011881870.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881870.1;locus_tag=LDO38_RS17330;product=CaiB/BaiF CoA transferase family protein;protein_id=WP_011881870.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 5077 6333 . + . ID=gene-LDO38_RS17335;Name=LDO38_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17335;old_locus_tag=BVI2075_430003 NZ_CAJZAL010000145.1 Protein Homology CDS 5077 6333 . + 0 ID=cds-WP_014725167.1;Parent=gene-LDO38_RS17335;Dbxref=GenBank:WP_014725167.1;Name=WP_014725167.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725167.1;locus_tag=LDO38_RS17335;product=PucR family transcriptional regulator;protein_id=WP_014725167.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 6711 7496 . + . ID=gene-LDO38_RS17340;Name=LDO38_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17340;old_locus_tag=BVI2075_430005 NZ_CAJZAL010000145.1 Protein Homology CDS 6711 7496 . + 0 ID=cds-WP_011881868.1;Parent=gene-LDO38_RS17340;Dbxref=GenBank:WP_011881868.1;Name=WP_011881868.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881868.1;locus_tag=LDO38_RS17340;product=enoyl-CoA hydratase-related protein;protein_id=WP_011881868.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 7693 7788 . - . ID=gene-LDO38_RS17345;Name=LDO38_RS17345;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS17345 NZ_CAJZAL010000145.1 tRNAscan-SE tRNA 7693 7788 . - . ID=rna-LDO38_RS17345;Parent=gene-LDO38_RS17345;anticodon=(pos:complement(7752..7754));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS17345;product=tRNA-Sec NZ_CAJZAL010000145.1 tRNAscan-SE exon 7693 7788 . - . ID=exon-LDO38_RS17345-1;Parent=rna-LDO38_RS17345;anticodon=(pos:complement(7752..7754));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS17345;product=tRNA-Sec NZ_CAJZAL010000145.1 RefSeq gene 7821 9749 . - . ID=gene-LDO38_RS17350;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=LDO38_RS17350;old_locus_tag=BVI2075_430006 NZ_CAJZAL010000145.1 Protein Homology CDS 7821 9749 . - 0 ID=cds-WP_059890323.1;Parent=gene-LDO38_RS17350;Dbxref=GenBank:WP_059890323.1;Name=WP_059890323.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495930.1;locus_tag=LDO38_RS17350;product=selenocysteine-specific translation elongation factor;protein_id=WP_059890323.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 9746 11185 . - . ID=gene-LDO38_RS17355;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=LDO38_RS17355;old_locus_tag=BVI2075_430007 NZ_CAJZAL010000145.1 Protein Homology CDS 9746 11185 . - 0 ID=cds-WP_200091570.1;Parent=gene-LDO38_RS17355;Dbxref=GenBank:WP_200091570.1;Name=WP_200091570.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899925.1;locus_tag=LDO38_RS17355;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_200091570.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 11252 12202 . - . ID=gene-LDO38_RS17360;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=LDO38_RS17360;old_locus_tag=BVI2075_430008 NZ_CAJZAL010000145.1 Protein Homology CDS 11252 12202 . - 0 ID=cds-WP_014725170.1;Parent=gene-LDO38_RS17360;Dbxref=GenBank:WP_014725170.1;Name=WP_014725170.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725170.1;locus_tag=LDO38_RS17360;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_014725170.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 12310 12936 . - . ID=gene-LDO38_RS17365;Name=LDO38_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17365;old_locus_tag=BVI2075_430009 NZ_CAJZAL010000145.1 Protein Homology CDS 12310 12936 . - 0 ID=cds-WP_011881787.1;Parent=gene-LDO38_RS17365;Dbxref=GenBank:WP_011881787.1;Name=WP_011881787.1;Ontology_term=GO:0009061,GO:0008863,GO:0009055,GO:0009326;gbkey=CDS;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415371.1;locus_tag=LDO38_RS17365;product=formate dehydrogenase subunit gamma;protein_id=WP_011881787.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 12933 13847 . - . ID=gene-LDO38_RS17370;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=LDO38_RS17370;old_locus_tag=BVI2075_430010 NZ_CAJZAL010000145.1 Protein Homology CDS 12933 13847 . - 0 ID=cds-WP_059734955.1;Parent=gene-LDO38_RS17370;Dbxref=GenBank:WP_059734955.1;Name=WP_059734955.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019256332.1;locus_tag=LDO38_RS17370;product=formate dehydrogenase subunit beta;protein_id=WP_059734955.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 13858 16929 . - . ID=gene-LDO38_RS17375;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=LDO38_RS17375;old_locus_tag=BVI2075_430011 NZ_CAJZAL010000145.1 Protein Homology CDS 13858 16929 . - 0 ID=cds-WP_080957658.1;Parent=gene-LDO38_RS17375;Dbxref=GenBank:WP_080957658.1;Name=WP_080957658.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004528945.1;locus_tag=LDO38_RS17375;product=formate dehydrogenase-N subunit alpha;protein_id=WP_080957658.1;transl_except=(pos:complement(16339..16341)%2Caa:Sec);transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 17072 18004 . + . ID=gene-LDO38_RS17380;Name=LDO38_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17380;old_locus_tag=BVI2075_430013 NZ_CAJZAL010000145.1 Protein Homology CDS 17072 18004 . + 0 ID=cds-WP_043292131.1;Parent=gene-LDO38_RS17380;Dbxref=GenBank:WP_043292131.1;Name=WP_043292131.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725173.1;locus_tag=LDO38_RS17380;product=YihY/virulence factor BrkB family protein;protein_id=WP_043292131.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 18087 18341 . + . ID=gene-LDO38_RS17385;Name=LDO38_RS17385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17385 NZ_CAJZAL010000145.1 GeneMarkS-2+ CDS 18087 18341 . + 0 ID=cds-WP_124260004.1;Parent=gene-LDO38_RS17385;Dbxref=GenBank:WP_124260004.1;Name=WP_124260004.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS17385;product=hypothetical protein;protein_id=WP_124260004.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 18403 19566 . + . ID=gene-LDO38_RS17390;Name=LDO38_RS17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17390;old_locus_tag=BVI2075_430014 NZ_CAJZAL010000145.1 Protein Homology CDS 18403 19566 . + 0 ID=cds-WP_011881782.1;Parent=gene-LDO38_RS17390;Dbxref=GenBank:WP_011881782.1;Name=WP_011881782.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603832.1;locus_tag=LDO38_RS17390;product=porin;protein_id=WP_011881782.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 19922 20395 . + . ID=gene-LDO38_RS17395;Name=LDO38_RS17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17395;old_locus_tag=BVI2075_430017 NZ_CAJZAL010000145.1 Protein Homology CDS 19922 20395 . + 0 ID=cds-WP_069246530.1;Parent=gene-LDO38_RS17395;Dbxref=GenBank:WP_069246530.1;Name=WP_069246530.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881781.1;locus_tag=LDO38_RS17395;product=VOC family protein;protein_id=WP_069246530.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 20636 21085 . - . ID=gene-LDO38_RS17400;Name=LDO38_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17400;old_locus_tag=BVI2075_430020 NZ_CAJZAL010000145.1 Protein Homology CDS 20636 21085 . - 0 ID=cds-WP_011881780.1;Parent=gene-LDO38_RS17400;Dbxref=GenBank:WP_011881780.1;Name=WP_011881780.1;Ontology_term=GO:0030261,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011400993.1;locus_tag=LDO38_RS17400;product=HU family DNA-binding protein;protein_id=WP_011881780.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 21366 22484 . + . ID=gene-LDO38_RS17405;Name=LDO38_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17405;old_locus_tag=BVI2075_430019 NZ_CAJZAL010000145.1 Protein Homology CDS 21366 22484 . + 0 ID=cds-WP_059476013.1;Parent=gene-LDO38_RS17405;Dbxref=GenBank:WP_059476013.1;Name=WP_059476013.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365706.1;locus_tag=LDO38_RS17405;product=acyltransferase family protein;protein_id=WP_059476013.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 23230 24117 . - . ID=gene-LDO38_RS17410;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=LDO38_RS17410;old_locus_tag=BVI2075_430021 NZ_CAJZAL010000145.1 Protein Homology CDS 23230 24117 . - 0 ID=cds-WP_011881778.1;Parent=gene-LDO38_RS17410;Dbxref=GenBank:WP_011881778.1;Name=WP_011881778.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881778.1;locus_tag=LDO38_RS17410;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_011881778.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 24345 24488 . - . ID=gene-LDO38_RS17415;Name=LDO38_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17415;old_locus_tag=BVI2075_430022 NZ_CAJZAL010000145.1 Protein Homology CDS 24345 24488 . - 0 ID=cds-WP_011881777.1;Parent=gene-LDO38_RS17415;Dbxref=GenBank:WP_011881777.1;Name=WP_011881777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329973.1;locus_tag=LDO38_RS17415;product=hypothetical protein;protein_id=WP_011881777.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 24703 25878 . + . ID=gene-LDO38_RS17420;Name=LDO38_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17420;old_locus_tag=BVI2075_430023 NZ_CAJZAL010000145.1 Protein Homology CDS 24703 25878 . + 0 ID=cds-WP_011881776.1;Parent=gene-LDO38_RS17420;Dbxref=GenBank:WP_011881776.1;Name=WP_011881776.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404003.1;locus_tag=LDO38_RS17420;product=acyltransferase family protein;protein_id=WP_011881776.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 26613 29066 . - . ID=gene-LDO38_RS17425;Name=LDO38_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17425;old_locus_tag=BVI2075_430024 NZ_CAJZAL010000145.1 Protein Homology CDS 26613 29066 . - 0 ID=cds-WP_224056540.1;Parent=gene-LDO38_RS17425;Dbxref=GenBank:WP_224056540.1;Name=WP_224056540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217287.1;locus_tag=LDO38_RS17425;product=glycosyltransferase family 4 protein;protein_id=WP_224056540.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 29063 30529 . - . ID=gene-LDO38_RS17430;Name=LDO38_RS17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17430;old_locus_tag=BVI2075_430025 NZ_CAJZAL010000145.1 Protein Homology CDS 29063 30529 . - 0 ID=cds-WP_014725181.1;Parent=gene-LDO38_RS17430;Dbxref=GenBank:WP_014725181.1;Name=WP_014725181.1;Ontology_term=GO:0140327,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=flippase activity|0140327||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365703.1;locus_tag=LDO38_RS17430;product=flippase;protein_id=WP_014725181.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 30548 32740 . - . ID=gene-LDO38_RS17435;Name=LDO38_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17435;old_locus_tag=BVI2075_430026 NZ_CAJZAL010000145.1 Protein Homology CDS 30548 32740 . - 0 ID=cds-WP_014725182.1;Parent=gene-LDO38_RS17435;Dbxref=GenBank:WP_014725182.1;Name=WP_014725182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467866.1;locus_tag=LDO38_RS17435;product=hypothetical protein;protein_id=WP_014725182.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 32864 33154 . - . ID=gene-LDO38_RS17440;Name=LDO38_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17440 NZ_CAJZAL010000145.1 GeneMarkS-2+ CDS 32864 33154 . - 0 ID=cds-WP_155624534.1;Parent=gene-LDO38_RS17440;Dbxref=GenBank:WP_155624534.1;Name=WP_155624534.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS17440;product=hypothetical protein;protein_id=WP_155624534.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 33234 34298 . + . ID=gene-LDO38_RS17445;Name=LDO38_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17445;old_locus_tag=BVI2075_430029 NZ_CAJZAL010000145.1 Protein Homology CDS 33234 34298 . + 0 ID=cds-WP_011881772.1;Parent=gene-LDO38_RS17445;Dbxref=GenBank:WP_011881772.1;Name=WP_011881772.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881772.1;locus_tag=LDO38_RS17445;product=acyltransferase family protein;protein_id=WP_011881772.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 34334 35380 . + . ID=gene-LDO38_RS17450;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=LDO38_RS17450;old_locus_tag=BVI2075_430028 NZ_CAJZAL010000145.1 Protein Homology CDS 34334 35380 . + 0 ID=cds-WP_011881771.1;Parent=gene-LDO38_RS17450;Dbxref=GenBank:WP_011881771.1;Name=WP_011881771.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028634.1;locus_tag=LDO38_RS17450;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_011881771.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 35367 36335 . + . ID=gene-LDO38_RS17455;Name=LDO38_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17455;old_locus_tag=BVI2075_430030 NZ_CAJZAL010000145.1 Protein Homology CDS 35367 36335 . + 0 ID=cds-WP_069246531.1;Parent=gene-LDO38_RS17455;Dbxref=GenBank:WP_069246531.1;Name=WP_069246531.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881770.1;locus_tag=LDO38_RS17455;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_069246531.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 36456 37646 . - . ID=gene-LDO38_RS17460;Name=LDO38_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17460;old_locus_tag=BVI2075_430031 NZ_CAJZAL010000145.1 Protein Homology CDS 36456 37646 . - 0 ID=cds-WP_069246532.1;Parent=gene-LDO38_RS17460;Dbxref=GenBank:WP_069246532.1;Name=WP_069246532.1;Ontology_term=GO:0019346,GO:0071268,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA,homocysteine biosynthetic process|0071268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694679.1;locus_tag=LDO38_RS17460;product=O-succinylhomoserine sulfhydrylase;protein_id=WP_069246532.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 37890 39422 . - . ID=gene-LDO38_RS17465;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=LDO38_RS17465;old_locus_tag=BVI2075_430032 NZ_CAJZAL010000145.1 Protein Homology CDS 37890 39422 . - 0 ID=cds-WP_011881768.1;Parent=gene-LDO38_RS17465;Dbxref=GenBank:WP_011881768.1;Name=WP_011881768.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004544727.1;locus_tag=LDO38_RS17465;product=amidophosphoribosyltransferase;protein_id=WP_011881768.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 39474 39968 . - . ID=gene-LDO38_RS17470;Name=LDO38_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17470;old_locus_tag=BVI2075_430033 NZ_CAJZAL010000145.1 Protein Homology CDS 39474 39968 . - 0 ID=cds-WP_011881767.1;Parent=gene-LDO38_RS17470;Dbxref=GenBank:WP_011881767.1;Name=WP_011881767.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188369.1;locus_tag=LDO38_RS17470;product=CvpA family protein;protein_id=WP_011881767.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 39975 40832 . - . ID=gene-LDO38_RS17475;Name=LDO38_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17475;old_locus_tag=BVI2075_430034 NZ_CAJZAL010000145.1 Protein Homology CDS 39975 40832 . - 0 ID=cds-WP_046424979.1;Parent=gene-LDO38_RS17475;Dbxref=GenBank:WP_046424979.1;Name=WP_046424979.1;Ontology_term=GO:0042834,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548088.1;locus_tag=LDO38_RS17475;product=SPOR domain-containing protein;protein_id=WP_046424979.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 40862 42172 . - . ID=gene-LDO38_RS17480;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=LDO38_RS17480;old_locus_tag=BVI2075_430035 NZ_CAJZAL010000145.1 Protein Homology CDS 40862 42172 . - 0 ID=cds-WP_014725185.1;Parent=gene-LDO38_RS17480;Dbxref=GenBank:WP_014725185.1;Name=WP_014725185.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089192.1;locus_tag=LDO38_RS17480;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_014725185.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 42273 43145 . - . ID=gene-LDO38_RS17485;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=LDO38_RS17485;old_locus_tag=BVI2075_430036 NZ_CAJZAL010000145.1 Protein Homology CDS 42273 43145 . - 0 ID=cds-WP_011881764.1;Parent=gene-LDO38_RS17485;Dbxref=GenBank:WP_011881764.1;Name=WP_011881764.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012403665.1;locus_tag=LDO38_RS17485;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_011881764.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 43209 44027 . - . ID=gene-LDO38_RS17490;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=LDO38_RS17490;old_locus_tag=BVI2075_430037 NZ_CAJZAL010000145.1 Protein Homology CDS 43209 44027 . - 0 ID=cds-WP_011881763.1;Parent=gene-LDO38_RS17490;Dbxref=GenBank:WP_011881763.1;Name=WP_011881763.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881763.1;locus_tag=LDO38_RS17490;product=tryptophan synthase subunit alpha;protein_id=WP_011881763.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 44119 44970 . - . ID=gene-LDO38_RS17495;Name=LDO38_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17495;old_locus_tag=BVI2075_430038 NZ_CAJZAL010000145.1 Protein Homology CDS 44119 44970 . - 0 ID=cds-WP_011881762.1;Parent=gene-LDO38_RS17495;Dbxref=GenBank:WP_011881762.1;Name=WP_011881762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329989.1;locus_tag=LDO38_RS17495;product=DNA-methyltransferase;protein_id=WP_011881762.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 44978 46171 . - . ID=gene-LDO38_RS17500;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=LDO38_RS17500;old_locus_tag=BVI2075_430039 NZ_CAJZAL010000145.1 Protein Homology CDS 44978 46171 . - 0 ID=cds-WP_011881761.1;Parent=gene-LDO38_RS17500;Dbxref=GenBank:WP_011881761.1;Name=WP_011881761.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329990.1;locus_tag=LDO38_RS17500;product=tryptophan synthase subunit beta;protein_id=WP_011881761.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 46226 46924 . - . ID=gene-LDO38_RS17505;Name=LDO38_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17505;old_locus_tag=BVI2075_430040 NZ_CAJZAL010000145.1 Protein Homology CDS 46226 46924 . - 0 ID=cds-WP_175999716.1;Parent=gene-LDO38_RS17505;Dbxref=GenBank:WP_175999716.1;Name=WP_175999716.1;Ontology_term=GO:0000162,GO:0004640;gbkey=CDS;go_function=phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365694.1;locus_tag=LDO38_RS17505;product=phosphoribosylanthranilate isomerase;protein_id=WP_175999716.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 46921 47733 . - . ID=gene-LDO38_RS17510;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=LDO38_RS17510;old_locus_tag=BVI2075_430041 NZ_CAJZAL010000145.1 Protein Homology CDS 46921 47733 . - 0 ID=cds-WP_059890315.1;Parent=gene-LDO38_RS17510;Dbxref=GenBank:WP_059890315.1;Name=WP_059890315.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399585.1;locus_tag=LDO38_RS17510;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_059890315.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 47733 49877 . - . ID=gene-LDO38_RS17515;Name=LDO38_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17515;old_locus_tag=BVI2075_430042 NZ_CAJZAL010000145.1 Protein Homology CDS 47733 49877 . - 0 ID=cds-WP_224056541.1;Parent=gene-LDO38_RS17515;Dbxref=GenBank:WP_224056541.1;Name=WP_224056541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881758.1;locus_tag=LDO38_RS17515;product=FimV/HubP family polar landmark protein;protein_id=WP_224056541.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 50012 50197 . - . ID=gene-LDO38_RS17520;Name=LDO38_RS17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17520;old_locus_tag=BVI2075_430043 NZ_CAJZAL010000145.1 GeneMarkS-2+ CDS 50012 50197 . - 0 ID=cds-WP_224056542.1;Parent=gene-LDO38_RS17520;Dbxref=GenBank:WP_224056542.1;Name=WP_224056542.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS17520;product=hypothetical protein;protein_id=WP_224056542.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 50356 51477 . - . ID=gene-LDO38_RS17525;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=LDO38_RS17525;old_locus_tag=BVI2075_430044 NZ_CAJZAL010000145.1 Protein Homology CDS 50356 51477 . - 0 ID=cds-WP_045578157.1;Parent=gene-LDO38_RS17525;Dbxref=GenBank:WP_045578157.1;Name=WP_045578157.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338485.1;locus_tag=LDO38_RS17525;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_045578157.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 51560 51679 . - . ID=gene-LDO38_RS17530;Name=LDO38_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17530 NZ_CAJZAL010000145.1 Protein Homology CDS 51560 51679 . - 0 ID=cds-WP_069246535.1;Parent=gene-LDO38_RS17530;Dbxref=GenBank:WP_069246535.1;Name=WP_069246535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329997.1;locus_tag=LDO38_RS17530;product=3-isopropylmalate dehydrogenase;protein_id=WP_069246535.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 51810 52877 . - . ID=gene-LDO38_RS17535;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=LDO38_RS17535;old_locus_tag=BVI2075_430045 NZ_CAJZAL010000145.1 Protein Homology CDS 51810 52877 . - 0 ID=cds-WP_014725192.1;Parent=gene-LDO38_RS17535;Dbxref=GenBank:WP_014725192.1;Name=WP_014725192.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725192.1;locus_tag=LDO38_RS17535;product=3-isopropylmalate dehydrogenase;protein_id=WP_014725192.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 52951 53601 . - . ID=gene-LDO38_RS17540;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=LDO38_RS17540;old_locus_tag=BVI2075_430046 NZ_CAJZAL010000145.1 Protein Homology CDS 52951 53601 . - 0 ID=cds-WP_011881755.1;Parent=gene-LDO38_RS17540;Dbxref=GenBank:WP_011881755.1;Name=WP_011881755.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099619.1;locus_tag=LDO38_RS17540;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_011881755.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 53669 53815 . - . ID=gene-LDO38_RS17545;Name=LDO38_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17545;old_locus_tag=BVI2075_430047 NZ_CAJZAL010000145.1 Protein Homology CDS 53669 53815 . - 0 ID=cds-WP_011881754.1;Parent=gene-LDO38_RS17545;Dbxref=GenBank:WP_011881754.1;Name=WP_011881754.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487745.1;locus_tag=LDO38_RS17545;product=entericidin A/B family lipoprotein;protein_id=WP_011881754.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 53819 55228 . - . ID=gene-LDO38_RS17550;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=LDO38_RS17550;old_locus_tag=BVI2075_430048 NZ_CAJZAL010000145.1 Protein Homology CDS 53819 55228 . - 0 ID=cds-WP_014725194.1;Parent=gene-LDO38_RS17550;Dbxref=GenBank:WP_014725194.1;Name=WP_014725194.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690586.1;locus_tag=LDO38_RS17550;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_014725194.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 55964 56689 . + . ID=gene-LDO38_RS17560;Name=LDO38_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17560;old_locus_tag=BVI2075_430049 NZ_CAJZAL010000145.1 Protein Homology CDS 55964 56689 . + 0 ID=cds-WP_034195017.1;Parent=gene-LDO38_RS17560;Dbxref=GenBank:WP_034195017.1;Name=WP_034195017.1;Ontology_term=GO:0006749,GO:0043295;gbkey=CDS;go_function=glutathione binding|0043295||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404027.1;locus_tag=LDO38_RS17560;product=glutathione S-transferase family protein;protein_id=WP_034195017.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 56704 58401 . - . ID=gene-LDO38_RS17565;Name=LDO38_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17565;old_locus_tag=BVI2075_430051 NZ_CAJZAL010000145.1 Protein Homology CDS 56704 58401 . - 0 ID=cds-WP_069240053.1;Parent=gene-LDO38_RS17565;Dbxref=GenBank:WP_069240053.1;Name=WP_069240053.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881730.1;locus_tag=LDO38_RS17565;product=flavin monoamine oxidase family protein;protein_id=WP_069240053.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 58441 58923 . - . ID=gene-LDO38_RS17570;Name=LDO38_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17570;old_locus_tag=BVI2075_430052 NZ_CAJZAL010000145.1 Protein Homology CDS 58441 58923 . - 0 ID=cds-WP_011881729.1;Parent=gene-LDO38_RS17570;Dbxref=GenBank:WP_011881729.1;Name=WP_011881729.1;Ontology_term=GO:0008152,GO:0009056;gbkey=CDS;go_process=metabolic process|0008152||IEA,catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881729.1;locus_tag=LDO38_RS17570;product=aromatic-ring-hydroxylating dioxygenase subunit beta;protein_id=WP_011881729.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 58907 60247 . - . ID=gene-LDO38_RS17575;Name=LDO38_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17575;old_locus_tag=BVI2075_430053 NZ_CAJZAL010000145.1 Protein Homology CDS 58907 60247 . - 0 ID=cds-WP_041494102.1;Parent=gene-LDO38_RS17575;Dbxref=GenBank:WP_041494102.1;Name=WP_041494102.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881728.1;locus_tag=LDO38_RS17575;product=Rieske 2Fe-2S domain-containing protein;protein_id=WP_041494102.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 60405 60803 . - . ID=gene-LDO38_RS17580;Name=LDO38_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17580;old_locus_tag=BVI2075_430054 NZ_CAJZAL010000145.1 Protein Homology CDS 60405 60803 . - 0 ID=cds-WP_011881727.1;Parent=gene-LDO38_RS17580;Dbxref=GenBank:WP_011881727.1;Name=WP_011881727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881727.1;locus_tag=LDO38_RS17580;product=hypothetical protein;protein_id=WP_011881727.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 60812 62194 . - . ID=gene-LDO38_RS17585;Name=LDO38_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17585;old_locus_tag=BVI2075_430055 NZ_CAJZAL010000145.1 Protein Homology CDS 60812 62194 . - 0 ID=cds-WP_011881726.1;Parent=gene-LDO38_RS17585;Dbxref=GenBank:WP_011881726.1;Name=WP_011881726.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881726.1;locus_tag=LDO38_RS17585;product=MFS transporter;protein_id=WP_011881726.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 62333 63238 . + . ID=gene-LDO38_RS17590;Name=LDO38_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17590;old_locus_tag=BVI2075_430056 NZ_CAJZAL010000145.1 Protein Homology CDS 62333 63238 . + 0 ID=cds-WP_011881725.1;Parent=gene-LDO38_RS17590;Dbxref=GenBank:WP_011881725.1;Name=WP_011881725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881725.1;locus_tag=LDO38_RS17590;product=LysR family transcriptional regulator;protein_id=WP_011881725.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 63260 64681 . - . ID=gene-LDO38_RS17595;Name=iaaH;gbkey=Gene;gene=iaaH;gene_biotype=protein_coding;locus_tag=LDO38_RS17595;old_locus_tag=BVI2075_430057 NZ_CAJZAL010000145.1 Protein Homology CDS 63260 64681 . - 0 ID=cds-WP_080484416.1;Parent=gene-LDO38_RS17595;Dbxref=GenBank:WP_080484416.1;Name=WP_080484416.1;gbkey=CDS;gene=iaaH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881724.1;locus_tag=LDO38_RS17595;product=indoleacetamide hydrolase;protein_id=WP_080484416.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 64958 66208 . - . ID=gene-LDO38_RS17600;Name=LDO38_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17600;old_locus_tag=BVI2075_430058 NZ_CAJZAL010000145.1 Protein Homology CDS 64958 66208 . - 0 ID=cds-WP_059668969.1;Parent=gene-LDO38_RS17600;Dbxref=GenBank:WP_059668969.1;Name=WP_059668969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217311.1;locus_tag=LDO38_RS17600;product=DUF1479 domain-containing protein;protein_id=WP_059668969.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 66313 66702 . - . ID=gene-LDO38_RS17605;Name=LDO38_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17605;old_locus_tag=BVI2075_430059 NZ_CAJZAL010000145.1 Protein Homology CDS 66313 66702 . - 0 ID=cds-WP_034195013.1;Parent=gene-LDO38_RS17605;Dbxref=GenBank:WP_034195013.1;Name=WP_034195013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881722.1;locus_tag=LDO38_RS17605;product=VOC family protein;protein_id=WP_034195013.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 66774 67775 . + . ID=gene-LDO38_RS17610;Name=LDO38_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17610;old_locus_tag=BVI2075_430060 NZ_CAJZAL010000145.1 Protein Homology CDS 66774 67775 . + 0 ID=cds-WP_069246605.1;Parent=gene-LDO38_RS17610;Dbxref=GenBank:WP_069246605.1;Name=WP_069246605.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355740.1;locus_tag=LDO38_RS17610;product=helix-turn-helix domain-containing protein;protein_id=WP_069246605.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 67866 69167 . - . ID=gene-LDO38_RS17615;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=LDO38_RS17615;old_locus_tag=BVI2075_430061 NZ_CAJZAL010000145.1 Protein Homology CDS 67866 69167 . - 0 ID=cds-WP_011881720.1;Parent=gene-LDO38_RS17615;Dbxref=GenBank:WP_011881720.1;Name=WP_011881720.1;Ontology_term=GO:0006099,GO:0036440,GO:0005737;gbkey=CDS;gene=gltA;go_component=cytoplasm|0005737||IEA;go_function=citrate synthase activity|0036440||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188362.1;locus_tag=LDO38_RS17615;product=citrate synthase;protein_id=WP_011881720.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 69221 69493 . - . ID=gene-LDO38_RS17620;Name=LDO38_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17620;old_locus_tag=BVI2075_430062 NZ_CAJZAL010000145.1 Protein Homology CDS 69221 69493 . - 0 ID=cds-WP_011881719.1;Parent=gene-LDO38_RS17620;Dbxref=GenBank:WP_011881719.1;Name=WP_011881719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028609.1;locus_tag=LDO38_RS17620;product=succinate dehydrogenase assembly factor 2;protein_id=WP_011881719.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 69501 70202 . - . ID=gene-LDO38_RS17625;Name=LDO38_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17625;old_locus_tag=BVI2075_430063 NZ_CAJZAL010000145.1 Protein Homology CDS 69501 70202 . - 0 ID=cds-WP_011881718.1;Parent=gene-LDO38_RS17625;Dbxref=GenBank:WP_011881718.1;Name=WP_011881718.1;Ontology_term=GO:0008177,GO:0046872;gbkey=CDS;go_function=succinate dehydrogenase (quinone) activity|0008177||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733632.1;locus_tag=LDO38_RS17625;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_011881718.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 70224 71999 . - . ID=gene-LDO38_RS17630;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=LDO38_RS17630;old_locus_tag=BVI2075_430064 NZ_CAJZAL010000145.1 Protein Homology CDS 70224 71999 . - 0 ID=cds-WP_011881717.1;Parent=gene-LDO38_RS17630;Dbxref=GenBank:WP_011881717.1;Name=WP_011881717.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014193768.1;locus_tag=LDO38_RS17630;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_011881717.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 72003 72371 . - . ID=gene-LDO38_RS17635;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=LDO38_RS17635;old_locus_tag=BVI2075_430065 NZ_CAJZAL010000145.1 Protein Homology CDS 72003 72371 . - 0 ID=cds-WP_006399546.1;Parent=gene-LDO38_RS17635;Dbxref=GenBank:WP_006399546.1;Name=WP_006399546.1;Ontology_term=GO:0006099,GO:0000104,GO:0020037,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhD;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,heme binding|0020037||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018439830.1;locus_tag=LDO38_RS17635;product=succinate dehydrogenase%2C hydrophobic membrane anchor protein;protein_id=WP_006399546.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 72376 72792 . - . ID=gene-LDO38_RS17640;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;locus_tag=LDO38_RS17640;old_locus_tag=BVI2075_430066 NZ_CAJZAL010000145.1 Protein Homology CDS 72376 72792 . - 0 ID=cds-WP_011881716.1;Parent=gene-LDO38_RS17640;Dbxref=GenBank:WP_011881716.1;Name=WP_011881716.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0045273;gbkey=CDS;gene=sdhC;go_component=respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009895818.1;locus_tag=LDO38_RS17640;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=WP_011881716.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 72963 73775 . - . ID=gene-LDO38_RS17645;Name=LDO38_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17645;old_locus_tag=BVI2075_430068 NZ_CAJZAL010000145.1 Protein Homology CDS 72963 73775 . - 0 ID=cds-WP_193043975.1;Parent=gene-LDO38_RS17645;Dbxref=GenBank:WP_193043975.1;Name=WP_193043975.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602596.1;locus_tag=LDO38_RS17645;product=GntR family transcriptional regulator;protein_id=WP_193043975.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 74074 75060 . + . ID=gene-LDO38_RS17650;Name=LDO38_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17650;old_locus_tag=BVI2075_430070 NZ_CAJZAL010000145.1 Protein Homology CDS 74074 75060 . + 0 ID=cds-WP_011881714.1;Parent=gene-LDO38_RS17650;Dbxref=GenBank:WP_011881714.1;Name=WP_011881714.1;Ontology_term=GO:0006108,GO:0016615;gbkey=CDS;go_function=malate dehydrogenase activity|0016615||IEA;go_process=malate metabolic process|0006108||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754984.1;locus_tag=LDO38_RS17650;product=malate dehydrogenase;protein_id=WP_011881714.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 75244 76248 . + . ID=gene-LDO38_RS17655;Name=LDO38_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17655;old_locus_tag=BVI2075_430071 NZ_CAJZAL010000145.1 Protein Homology CDS 75244 76248 . + 0 ID=cds-WP_069246537.1;Parent=gene-LDO38_RS17655;Dbxref=GenBank:WP_069246537.1;Name=WP_069246537.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881713.1;locus_tag=LDO38_RS17655;product=HpcH/HpaI aldolase/citrate lyase family protein;protein_id=WP_069246537.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 76479 76988 . + . ID=gene-LDO38_RS17660;Name=LDO38_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17660;old_locus_tag=BVI2075_430073 NZ_CAJZAL010000145.1 Protein Homology CDS 76479 76988 . + 0 ID=cds-WP_011881712.1;Parent=gene-LDO38_RS17660;Dbxref=GenBank:WP_011881712.1;Name=WP_011881712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724726.1;locus_tag=LDO38_RS17660;product=hypothetical protein;protein_id=WP_011881712.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 77006 78457 . + . ID=gene-LDO38_RS17665;Name=LDO38_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17665;old_locus_tag=BVI2075_430074 NZ_CAJZAL010000145.1 Protein Homology CDS 77006 78457 . + 0 ID=cds-WP_045578164.1;Parent=gene-LDO38_RS17665;Dbxref=GenBank:WP_045578164.1;Name=WP_045578164.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487726.1;locus_tag=LDO38_RS17665;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WP_045578164.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 78510 81227 . + . ID=gene-LDO38_RS17670;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=LDO38_RS17670;old_locus_tag=BVI2075_430075 NZ_CAJZAL010000145.1 Protein Homology CDS 78510 81227 . + 0 ID=cds-WP_011881710.1;Parent=gene-LDO38_RS17670;Dbxref=GenBank:WP_011881710.1;Name=WP_011881710.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012428654.1;locus_tag=LDO38_RS17670;product=aconitate hydratase AcnA;protein_id=WP_011881710.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 81349 81789 . - . ID=gene-LDO38_RS17675;Name=LDO38_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17675;old_locus_tag=BVI2075_430076 NZ_CAJZAL010000145.1 Protein Homology CDS 81349 81789 . - 0 ID=cds-WP_011881709.1;Parent=gene-LDO38_RS17675;Dbxref=GenBank:WP_011881709.1;Name=WP_011881709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479363.1;locus_tag=LDO38_RS17675;product=DUF1801 domain-containing protein;protein_id=WP_011881709.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 81786 82217 . - . ID=gene-LDO38_RS17680;Name=LDO38_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17680;old_locus_tag=BVI2075_430077 NZ_CAJZAL010000145.1 Protein Homology CDS 81786 82217 . - 0 ID=cds-WP_011881708.1;Parent=gene-LDO38_RS17680;Dbxref=GenBank:WP_011881708.1;Name=WP_011881708.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724724.1;locus_tag=LDO38_RS17680;product=SRPBCC family protein;protein_id=WP_011881708.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 82214 82537 . - . ID=gene-LDO38_RS17685;Name=LDO38_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17685;old_locus_tag=BVI2075_430078 NZ_CAJZAL010000145.1 Protein Homology CDS 82214 82537 . - 0 ID=cds-WP_014724723.1;Parent=gene-LDO38_RS17685;Dbxref=GenBank:WP_014724723.1;Name=WP_014724723.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899976.1;locus_tag=LDO38_RS17685;product=ArsR/SmtB family transcription factor;protein_id=WP_014724723.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 83240 84979 . + . ID=gene-LDO38_RS17690;Name=LDO38_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17690;old_locus_tag=BVI2075_430080 NZ_CAJZAL010000145.1 Protein Homology CDS 83240 84979 . + 0 ID=cds-WP_059668967.1;Parent=gene-LDO38_RS17690;Dbxref=GenBank:WP_059668967.1;Name=WP_059668967.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399530.1;locus_tag=LDO38_RS17690;product=S53 family peptidase;protein_id=WP_059668967.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 85040 85876 . - . ID=gene-LDO38_RS17695;Name=LDO38_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17695;old_locus_tag=BVI2075_430081 NZ_CAJZAL010000145.1 Protein Homology CDS 85040 85876 . - 0 ID=cds-WP_011881704.1;Parent=gene-LDO38_RS17695;Dbxref=GenBank:WP_011881704.1;Name=WP_011881704.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217864.1;locus_tag=LDO38_RS17695;product=ABC transporter permease;protein_id=WP_011881704.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 85911 87167 . - . ID=gene-LDO38_RS17700;Name=LDO38_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17700;old_locus_tag=BVI2075_430082 NZ_CAJZAL010000145.1 Protein Homology CDS 85911 87167 . - 0 ID=cds-WP_011881703.1;Parent=gene-LDO38_RS17700;Dbxref=GenBank:WP_011881703.1;Name=WP_011881703.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196172.1;locus_tag=LDO38_RS17700;product=ABC transporter permease;protein_id=WP_011881703.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 87270 88316 . - . ID=gene-LDO38_RS17705;Name=LDO38_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17705;old_locus_tag=BVI2075_430083 NZ_CAJZAL010000145.1 Protein Homology CDS 87270 88316 . - 0 ID=cds-WP_069246538.1;Parent=gene-LDO38_RS17705;Dbxref=GenBank:WP_069246538.1;Name=WP_069246538.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753702.1;locus_tag=LDO38_RS17705;product=ABC transporter substrate-binding protein;protein_id=WP_069246538.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 88391 89482 . - . ID=gene-LDO38_RS17710;Name=LDO38_RS17710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17710;old_locus_tag=BVI2075_430085 NZ_CAJZAL010000145.1 Protein Homology CDS 88391 89482 . - 0 ID=cds-WP_011881701.1;Parent=gene-LDO38_RS17710;Dbxref=GenBank:WP_011881701.1;Name=WP_011881701.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479371.1;locus_tag=LDO38_RS17710;product=ABC transporter ATP-binding protein;protein_id=WP_011881701.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 89591 91114 . + . ID=gene-LDO38_RS17715;Name=LDO38_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17715;old_locus_tag=BVI2075_430084 NZ_CAJZAL010000145.1 Protein Homology CDS 89591 91114 . + 0 ID=cds-WP_069246539.1;Parent=gene-LDO38_RS17715;Dbxref=GenBank:WP_069246539.1;Name=WP_069246539.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495971.1;locus_tag=LDO38_RS17715;product=PLP-dependent aminotransferase family protein;protein_id=WP_069246539.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 91151 92185 . - . ID=gene-LDO38_RS17720;Name=LDO38_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17720;old_locus_tag=BVI2075_430086 NZ_CAJZAL010000145.1 Protein Homology CDS 91151 92185 . - 0 ID=cds-WP_011881699.1;Parent=gene-LDO38_RS17720;Dbxref=GenBank:WP_011881699.1;Name=WP_011881699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881699.1;locus_tag=LDO38_RS17720;product=lipase secretion chaperone;protein_id=WP_011881699.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 92189 93283 . - . ID=gene-LDO38_RS17725;Name=LDO38_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17725;old_locus_tag=BVI2075_430087 NZ_CAJZAL010000145.1 Protein Homology CDS 92189 93283 . - 0 ID=cds-WP_011881698.1;Parent=gene-LDO38_RS17725;Dbxref=GenBank:WP_011881698.1;Name=WP_011881698.1;Ontology_term=GO:0016042,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754864.1;locus_tag=LDO38_RS17725;product=esterase/lipase family protein;protein_id=WP_011881698.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 93521 94615 . - . ID=gene-LDO38_RS17730;Name=LDO38_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17730;old_locus_tag=BVI2075_430088 NZ_CAJZAL010000145.1 Protein Homology CDS 93521 94615 . - 0 ID=cds-WP_069246540.1;Parent=gene-LDO38_RS17730;Dbxref=GenBank:WP_069246540.1;Name=WP_069246540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754864.1;locus_tag=LDO38_RS17730;product=triacylglycerol lipase;protein_id=WP_069246540.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 94843 96972 . - . ID=gene-LDO38_RS17735;Name=LDO38_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17735;old_locus_tag=BVI2075_430090 NZ_CAJZAL010000145.1 Protein Homology CDS 94843 96972 . - 0 ID=cds-WP_059895546.1;Parent=gene-LDO38_RS17735;Dbxref=GenBank:WP_059895546.1;Name=WP_059895546.1;Ontology_term=GO:0006825,GO:0005375,GO:0005507,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=copper ion transmembrane transporter activity|0005375||IEA,copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548120.1;locus_tag=LDO38_RS17735;product=TonB-dependent copper receptor;protein_id=WP_059895546.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 97054 97422 . - . ID=gene-LDO38_RS17740;Name=LDO38_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17740;old_locus_tag=BVI2075_430091 NZ_CAJZAL010000145.1 Protein Homology CDS 97054 97422 . - 0 ID=cds-WP_011881695.1;Parent=gene-LDO38_RS17740;Dbxref=GenBank:WP_011881695.1;Name=WP_011881695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548121.1;locus_tag=LDO38_RS17740;product=DUF2946 domain-containing protein;protein_id=WP_011881695.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 97579 98115 . - . ID=gene-LDO38_RS17745;Name=LDO38_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17745;old_locus_tag=BVI2075_430093 NZ_CAJZAL010000145.1 Protein Homology CDS 97579 98115 . - 0 ID=cds-WP_034195003.1;Parent=gene-LDO38_RS17745;Dbxref=GenBank:WP_034195003.1;Name=WP_034195003.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483770.1;locus_tag=LDO38_RS17745;product=cytochrome b;protein_id=WP_034195003.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 98347 98985 . + . ID=gene-LDO38_RS17750;Name=LDO38_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17750;old_locus_tag=BVI2075_430092 NZ_CAJZAL010000145.1 Protein Homology CDS 98347 98985 . + 0 ID=cds-WP_034195059.1;Parent=gene-LDO38_RS17750;Dbxref=GenBank:WP_034195059.1;Name=WP_034195059.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404060.1;locus_tag=LDO38_RS17750;product=Pr6Pr family membrane protein;protein_id=WP_034195059.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 99035 99769 . - . ID=gene-LDO38_RS17755;Name=LDO38_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17755;old_locus_tag=BVI2075_430094 NZ_CAJZAL010000145.1 Protein Homology CDS 99035 99769 . - 0 ID=cds-WP_034195002.1;Parent=gene-LDO38_RS17755;Dbxref=GenBank:WP_034195002.1;Name=WP_034195002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495975.1;locus_tag=LDO38_RS17755;product=M23 family metallopeptidase;protein_id=WP_034195002.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 100144 100485 . - . ID=gene-LDO38_RS17760;Name=LDO38_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17760;old_locus_tag=BVI2075_430095 NZ_CAJZAL010000145.1 Protein Homology CDS 100144 100485 . - 0 ID=cds-WP_011881691.1;Parent=gene-LDO38_RS17760;Dbxref=GenBank:WP_011881691.1;Name=WP_011881691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399511.1;locus_tag=LDO38_RS17760;product=DUF4148 domain-containing protein;protein_id=WP_011881691.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 100685 102097 . - . ID=gene-LDO38_RS17765;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=LDO38_RS17765;old_locus_tag=BVI2075_430096 NZ_CAJZAL010000145.1 Protein Homology CDS 100685 102097 . - 0 ID=cds-WP_011881690.1;Parent=gene-LDO38_RS17765;Dbxref=GenBank:WP_011881690.1;Name=WP_011881690.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899993.1;locus_tag=LDO38_RS17765;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_011881690.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 102195 102836 . - . ID=gene-LDO38_RS17770;Name=LDO38_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17770;old_locus_tag=BVI2075_430097 NZ_CAJZAL010000145.1 Protein Homology CDS 102195 102836 . - 0 ID=cds-WP_059695968.1;Parent=gene-LDO38_RS17770;Dbxref=GenBank:WP_059695968.1;Name=WP_059695968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881689.1;locus_tag=LDO38_RS17770;product=DUF938 domain-containing protein;protein_id=WP_059695968.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 102833 103753 . - . ID=gene-LDO38_RS17775;Name=LDO38_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17775;old_locus_tag=BVI2075_430098 NZ_CAJZAL010000145.1 Protein Homology CDS 102833 103753 . - 0 ID=cds-WP_059623981.1;Parent=gene-LDO38_RS17775;Dbxref=GenBank:WP_059623981.1;Name=WP_059623981.1;Ontology_term=GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658326.1;locus_tag=LDO38_RS17775;product=NAD-dependent protein deacetylase;protein_id=WP_059623981.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 104868 105827 . + . ID=gene-LDO38_RS17780;Name=LDO38_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17780;old_locus_tag=BVI2075_430100 NZ_CAJZAL010000145.1 Protein Homology CDS 104868 105827 . + 0 ID=cds-WP_069240604.1;Parent=gene-LDO38_RS17780;Dbxref=GenBank:WP_069240604.1;Name=WP_069240604.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724710.1;locus_tag=LDO38_RS17780;product=TIGR03571 family LLM class oxidoreductase;protein_id=WP_069240604.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 106091 108577 . + . ID=gene-LDO38_RS17785;Name=LDO38_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17785;old_locus_tag=BVI2075_430101 NZ_CAJZAL010000145.1 Protein Homology CDS 106091 108577 . + 0 ID=cds-WP_034194998.1;Parent=gene-LDO38_RS17785;Dbxref=GenBank:WP_034194998.1;Name=WP_034194998.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724709.1;locus_tag=LDO38_RS17785;product=mechanosensitive ion channel family protein;protein_id=WP_034194998.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 108674 110224 . - . ID=gene-LDO38_RS17790;Name=LDO38_RS17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17790;old_locus_tag=BVI2075_430102 NZ_CAJZAL010000145.1 Protein Homology CDS 108674 110224 . - 0 ID=cds-WP_011881684.1;Parent=gene-LDO38_RS17790;Dbxref=GenBank:WP_011881684.1;Name=WP_011881684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365645.1;locus_tag=LDO38_RS17790;product=phospholipase D family protein;protein_id=WP_011881684.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 110477 111799 . + . ID=gene-LDO38_RS17795;Name=LDO38_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17795;old_locus_tag=BVI2075_430103 NZ_CAJZAL010000145.1 Protein Homology CDS 110477 111799 . + 0 ID=cds-WP_069240038.1;Parent=gene-LDO38_RS17795;Dbxref=GenBank:WP_069240038.1;Name=WP_069240038.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019976.6;locus_tag=LDO38_RS17795;product=NERD domain-containing protein;protein_id=WP_069240038.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 112065 112349 . - . ID=gene-LDO38_RS17800;Name=LDO38_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17800 NZ_CAJZAL010000145.1 GeneMarkS-2+ CDS 112065 112349 . - 0 ID=cds-WP_043292103.1;Parent=gene-LDO38_RS17800;Dbxref=GenBank:WP_043292103.1;Name=WP_043292103.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS17800;product=hypothetical protein;protein_id=WP_043292103.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 112372 112812 . + . ID=gene-LDO38_RS17805;Name=LDO38_RS17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17805;old_locus_tag=BVI2075_430104 NZ_CAJZAL010000145.1 Protein Homology CDS 112372 112812 . + 0 ID=cds-WP_041494097.1;Parent=gene-LDO38_RS17805;Dbxref=GenBank:WP_041494097.1;Name=WP_041494097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881682.1;locus_tag=LDO38_RS17805;product=hypothetical protein;protein_id=WP_041494097.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 112951 113940 . + . ID=gene-LDO38_RS17810;Name=LDO38_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17810;old_locus_tag=BVI2075_430105 NZ_CAJZAL010000145.1 Protein Homology CDS 112951 113940 . + 0 ID=cds-WP_034194994.1;Parent=gene-LDO38_RS17810;Dbxref=GenBank:WP_034194994.1;Name=WP_034194994.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525229.1;locus_tag=LDO38_RS17810;product=patatin-like phospholipase family protein;protein_id=WP_034194994.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq gene 114460 116016 . - . ID=gene-LDO38_RS17815;Name=LDO38_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17815;old_locus_tag=BVI2075_430106 NZ_CAJZAL010000145.1 Protein Homology CDS 114460 116016 . - 0 ID=cds-WP_069240603.1;Parent=gene-LDO38_RS17815;Dbxref=GenBank:WP_069240603.1;Name=WP_069240603.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724705.1;locus_tag=LDO38_RS17815;product=methyl-accepting chemotaxis protein;protein_id=WP_069240603.1;transl_table=11 NZ_CAJZAL010000145.1 RefSeq pseudogene 116467 116764 . + . ID=gene-LDO38_RS17820;Name=LDO38_RS17820;end_range=116764,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS17820;partial=true;pseudo=true;start_range=.,116467 NZ_CAJZAL010000145.1 Protein Homology CDS 116467 116764 . + 0 ID=cds-LDO38_RS17820;Parent=gene-LDO38_RS17820;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=116764,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407836.1;locus_tag=LDO38_RS17820;partial=true;product=endopolygalacturonase;pseudo=true;start_range=.,116467;transl_table=11 ##sequence-region NZ_CAJZAL010000146.1 1 52658 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000146.1 RefSeq region 1 52658 . + . ID=NZ_CAJZAL010000146.1:1..52658;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_44 NZ_CAJZAL010000146.1 RefSeq pseudogene 1 298 . - . ID=gene-LDO38_RS17825;Name=LDO38_RS17825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS17825;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000146.1 Protein Homology CDS 1 298 . - 0 ID=cds-LDO38_RS17825;Parent=gene-LDO38_RS17825;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885454.1;locus_tag=LDO38_RS17825;partial=true;product=4'-phosphopantetheinyl transferase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 459 1508 . - . ID=gene-LDO38_RS17830;Name=LDO38_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17830;old_locus_tag=BVI2075_440002 NZ_CAJZAL010000146.1 Protein Homology CDS 459 1508 . - 0 ID=cds-WP_059462155.1;Parent=gene-LDO38_RS17830;Dbxref=GenBank:WP_059462155.1;Name=WP_059462155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328852.1;locus_tag=LDO38_RS17830;product=alpha/beta hydrolase family protein;protein_id=WP_059462155.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 1629 2570 . + . ID=gene-LDO38_RS17835;Name=LDO38_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17835;old_locus_tag=BVI2075_440003 NZ_CAJZAL010000146.1 Protein Homology CDS 1629 2570 . + 0 ID=cds-WP_046428784.1;Parent=gene-LDO38_RS17835;Dbxref=GenBank:WP_046428784.1;Name=WP_046428784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885456.1;locus_tag=LDO38_RS17835;product=LysR substrate-binding domain-containing protein;protein_id=WP_046428784.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 3078 4310 . + . ID=gene-LDO38_RS17840;Name=LDO38_RS17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17840;old_locus_tag=BVI2075_440005 NZ_CAJZAL010000146.1 Protein Homology CDS 3078 4310 . + 0 ID=cds-WP_034194573.1;Parent=gene-LDO38_RS17840;Dbxref=GenBank:WP_034194573.1;Name=WP_034194573.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896574.1;locus_tag=LDO38_RS17840;product=MFS transporter;protein_id=WP_034194573.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 4301 4423 . + . ID=gene-LDO38_RS30095;Name=LDO38_RS30095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30095 NZ_CAJZAL010000146.1 Protein Homology CDS 4301 4423 . + 0 ID=cds-WP_014723320.1;Parent=gene-LDO38_RS30095;Dbxref=GenBank:WP_014723320.1;Name=WP_014723320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407953.1;locus_tag=LDO38_RS30095;product=hypothetical protein;protein_id=WP_014723320.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq pseudogene 4451 4762 . - . ID=gene-LDO38_RS30570;Name=LDO38_RS30570;end_range=4762,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30570;partial=true;pseudo=true NZ_CAJZAL010000146.1 Protein Homology CDS 4451 4762 . - 0 ID=cds-LDO38_RS30570;Parent=gene-LDO38_RS30570;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4762,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549418.1;locus_tag=LDO38_RS30570;partial=true;product=FAD-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 4823 5803 . - . ID=gene-LDO38_RS17850;Name=LDO38_RS17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17850;old_locus_tag=BVI2075_440006 NZ_CAJZAL010000146.1 Protein Homology CDS 4823 5803 . - 0 ID=cds-WP_059475958.1;Parent=gene-LDO38_RS17850;Dbxref=GenBank:WP_059475958.1;Name=WP_059475958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328857.1;locus_tag=LDO38_RS17850;product=hypothetical protein;protein_id=WP_059475958.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 6281 7330 . + . ID=gene-LDO38_RS17855;Name=LDO38_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17855;old_locus_tag=BVI2075_440007 NZ_CAJZAL010000146.1 Protein Homology CDS 6281 7330 . + 0 ID=cds-WP_059463487.1;Parent=gene-LDO38_RS17855;Dbxref=GenBank:WP_059463487.1;Name=WP_059463487.1;Ontology_term=GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407949.1;locus_tag=LDO38_RS17855;product=lactonase family protein;protein_id=WP_059463487.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 7368 8405 . - . ID=gene-LDO38_RS17860;Name=LDO38_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17860;old_locus_tag=BVI2075_440008 NZ_CAJZAL010000146.1 Protein Homology CDS 7368 8405 . - 0 ID=cds-WP_046428776.1;Parent=gene-LDO38_RS17860;Dbxref=GenBank:WP_046428776.1;Name=WP_046428776.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896560.1;locus_tag=LDO38_RS17860;product=AraC family transcriptional regulator;protein_id=WP_046428776.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 8639 9751 . + . ID=gene-LDO38_RS17865;Name=LDO38_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17865;old_locus_tag=BVI2075_440009 NZ_CAJZAL010000146.1 Protein Homology CDS 8639 9751 . + 0 ID=cds-WP_045578941.1;Parent=gene-LDO38_RS17865;Dbxref=GenBank:WP_045578941.1;Name=WP_045578941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694329.1;locus_tag=LDO38_RS17865;product=fatty acid desaturase;protein_id=WP_045578941.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 9773 10393 . - . ID=gene-LDO38_RS17870;Name=LDO38_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17870;old_locus_tag=BVI2075_440010 NZ_CAJZAL010000146.1 Protein Homology CDS 9773 10393 . - 0 ID=cds-WP_059475957.1;Parent=gene-LDO38_RS17870;Dbxref=GenBank:WP_059475957.1;Name=WP_059475957.1;Ontology_term=GO:0016311,GO:0016791,GO:0046872;gbkey=CDS;go_function=phosphatase activity|0016791||IEA,metal ion binding|0046872||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467662.1;locus_tag=LDO38_RS17870;product=HAD family hydrolase;protein_id=WP_059475957.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 10588 11454 . - . ID=gene-LDO38_RS17875;Name=LDO38_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17875;old_locus_tag=BVI2075_440012 NZ_CAJZAL010000146.1 Protein Homology CDS 10588 11454 . - 0 ID=cds-WP_224056543.1;Parent=gene-LDO38_RS17875;Dbxref=GenBank:WP_224056543.1;Name=WP_224056543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497779.1;locus_tag=LDO38_RS17875;product=hypothetical protein;protein_id=WP_224056543.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 11500 12156 . - . ID=gene-LDO38_RS17880;Name=LDO38_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17880;old_locus_tag=BVI2075_440013 NZ_CAJZAL010000146.1 Protein Homology CDS 11500 12156 . - 0 ID=cds-WP_034194585.1;Parent=gene-LDO38_RS17880;Dbxref=GenBank:WP_034194585.1;Name=WP_034194585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482759.1;locus_tag=LDO38_RS17880;product=TerD family protein;protein_id=WP_034194585.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 12247 13263 . - . ID=gene-LDO38_RS17885;Name=LDO38_RS17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17885;old_locus_tag=BVI2075_440014 NZ_CAJZAL010000146.1 Protein Homology CDS 12247 13263 . - 0 ID=cds-WP_045578939.1;Parent=gene-LDO38_RS17885;Dbxref=GenBank:WP_045578939.1;Name=WP_045578939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497778.1;locus_tag=LDO38_RS17885;product=DUF475 domain-containing protein;protein_id=WP_045578939.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 13308 14045 . - . ID=gene-LDO38_RS17890;Name=LDO38_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17890;old_locus_tag=BVI2075_440015 NZ_CAJZAL010000146.1 Protein Homology CDS 13308 14045 . - 0 ID=cds-WP_224056544.1;Parent=gene-LDO38_RS17890;Dbxref=GenBank:WP_224056544.1;Name=WP_224056544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497777.1;locus_tag=LDO38_RS17890;product=VWA domain-containing protein;protein_id=WP_224056544.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 14057 15169 . - . ID=gene-LDO38_RS17895;Name=LDO38_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17895;old_locus_tag=BVI2075_440016 NZ_CAJZAL010000146.1 Protein Homology CDS 14057 15169 . - 0 ID=cds-WP_059561104.1;Parent=gene-LDO38_RS17895;Dbxref=GenBank:WP_059561104.1;Name=WP_059561104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482744.1;locus_tag=LDO38_RS17895;product=toxic anion resistance protein;protein_id=WP_059561104.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 15936 16026 . + . ID=gene-LDO38_RS17900;Name=LDO38_RS17900;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS17900;old_locus_tag=BVI2075_TRNA8 NZ_CAJZAL010000146.1 tRNAscan-SE tRNA 15936 16026 . + . ID=rna-LDO38_RS17900;Parent=gene-LDO38_RS17900;anticodon=(pos:15970..15972);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS17900;product=tRNA-Ser NZ_CAJZAL010000146.1 tRNAscan-SE exon 15936 16026 . + . ID=exon-LDO38_RS17900-1;Parent=rna-LDO38_RS17900;anticodon=(pos:15970..15972);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS17900;product=tRNA-Ser NZ_CAJZAL010000146.1 RefSeq gene 17040 19547 . + . ID=gene-LDO38_RS17905;Name=LDO38_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17905;old_locus_tag=BVI2075_440020 NZ_CAJZAL010000146.1 Protein Homology CDS 17040 19547 . + 0 ID=cds-WP_059669278.1;Parent=gene-LDO38_RS17905;Dbxref=GenBank:WP_059669278.1;Name=WP_059669278.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401578.1;locus_tag=LDO38_RS17905;product=type VI secretion system Vgr family protein;protein_id=WP_059669278.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 19597 22668 . + . ID=gene-LDO38_RS17910;Name=LDO38_RS17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17910;old_locus_tag=BVI2075_440021 NZ_CAJZAL010000146.1 Protein Homology CDS 19597 22668 . + 0 ID=cds-WP_175658140.1;Parent=gene-LDO38_RS17910;Dbxref=GenBank:WP_175658140.1;Name=WP_175658140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657435.1;locus_tag=LDO38_RS17910;product=lytic transglycosylase domain-containing protein;protein_id=WP_175658140.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 22652 23515 . + . ID=gene-LDO38_RS17915;Name=LDO38_RS17915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17915;old_locus_tag=BVI2075_440022 NZ_CAJZAL010000146.1 GeneMarkS-2+ CDS 22652 23515 . + 0 ID=cds-WP_124259907.1;Parent=gene-LDO38_RS17915;Dbxref=GenBank:WP_124259907.1;Name=WP_124259907.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS17915;product=hypothetical protein;protein_id=WP_124259907.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 23644 23895 . + . ID=gene-LDO38_RS17920;Name=LDO38_RS17920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17920;old_locus_tag=BVI2075_440023 NZ_CAJZAL010000146.1 Protein Homology CDS 23644 23895 . + 0 ID=cds-WP_034194581.1;Parent=gene-LDO38_RS17920;Dbxref=GenBank:WP_034194581.1;Name=WP_034194581.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885477.1;locus_tag=LDO38_RS17920;product=PAAR domain-containing protein;protein_id=WP_034194581.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 24595 24960 . + . ID=gene-LDO38_RS17925;Name=LDO38_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17925;old_locus_tag=BVI2075_440025 NZ_CAJZAL010000146.1 Protein Homology CDS 24595 24960 . + 0 ID=cds-WP_072465541.1;Parent=gene-LDO38_RS17925;Dbxref=GenBank:WP_072465541.1;Name=WP_072465541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734117.1;locus_tag=LDO38_RS17925;product=lysozyme inhibitor LprI family protein;protein_id=WP_072465541.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 25102 25632 . + . ID=gene-LDO38_RS17930;Name=LDO38_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17930;old_locus_tag=BVI2075_440027 NZ_CAJZAL010000146.1 Protein Homology CDS 25102 25632 . + 0 ID=cds-WP_080484201.1;Parent=gene-LDO38_RS17930;Dbxref=GenBank:WP_080484201.1;Name=WP_080484201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691781.1;locus_tag=LDO38_RS17930;product=hypothetical protein;protein_id=WP_080484201.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 25689 27704 . - . ID=gene-LDO38_RS17935;Name=LDO38_RS17935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17935;old_locus_tag=BVI2075_440028 NZ_CAJZAL010000146.1 Protein Homology CDS 25689 27704 . - 0 ID=cds-WP_011885478.1;Parent=gene-LDO38_RS17935;Dbxref=GenBank:WP_011885478.1;Name=WP_011885478.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187151.1;locus_tag=LDO38_RS17935;product=sodium:solute symporter family protein;protein_id=WP_011885478.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 27708 28058 . - . ID=gene-LDO38_RS17940;Name=LDO38_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17940;old_locus_tag=BVI2075_440029 NZ_CAJZAL010000146.1 Protein Homology CDS 27708 28058 . - 0 ID=cds-WP_011885479.1;Parent=gene-LDO38_RS17940;Dbxref=GenBank:WP_011885479.1;Name=WP_011885479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885479.1;locus_tag=LDO38_RS17940;product=DUF4212 domain-containing protein;protein_id=WP_011885479.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 28299 28621 . - . ID=gene-LDO38_RS30575;Name=LDO38_RS30575;end_range=28621,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30575;old_locus_tag=BVI2075_440031;partial=true;start_range=.,28299 NZ_CAJZAL010000146.1 Protein Homology CDS 28299 28621 . - 0 ID=cds-WP_176043330.1;Parent=gene-LDO38_RS30575;Dbxref=GenBank:WP_176043330.1;Name=WP_176043330.1;end_range=28621,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014750385.1;locus_tag=LDO38_RS30575;partial=true;product=AMP-binding enzyme;protein_id=WP_176043330.1;start_range=.,28299;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 28632 29866 . - . ID=gene-LDO38_RS17945;Name=LDO38_RS17945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17945;old_locus_tag=BVI2075_440032;partial=true;start_range=.,28632 NZ_CAJZAL010000146.1 Protein Homology CDS 28632 29866 . - 0 ID=cds-WP_435520955.1;Parent=gene-LDO38_RS17945;Dbxref=GenBank:WP_435520955.1;Name=WP_435520955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328876.1;locus_tag=LDO38_RS17945;partial=true;product=AMP-binding protein;protein_id=WP_435520955.1;start_range=.,28632;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 30183 31085 . + . ID=gene-LDO38_RS17950;Name=LDO38_RS17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17950;old_locus_tag=BVI2075_440033 NZ_CAJZAL010000146.1 Protein Homology CDS 30183 31085 . + 0 ID=cds-WP_011885481.1;Parent=gene-LDO38_RS17950;Dbxref=GenBank:WP_011885481.1;Name=WP_011885481.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549404.1;locus_tag=LDO38_RS17950;product=DMT family transporter;protein_id=WP_011885481.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 31208 31789 . + . ID=gene-LDO38_RS17955;Name=LDO38_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17955;old_locus_tag=BVI2075_440034 NZ_CAJZAL010000146.1 Protein Homology CDS 31208 31789 . + 0 ID=cds-WP_011885482.1;Parent=gene-LDO38_RS17955;Dbxref=GenBank:WP_011885482.1;Name=WP_011885482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407941.1;locus_tag=LDO38_RS17955;product=TIGR00645 family protein;protein_id=WP_011885482.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 31832 33355 . + . ID=gene-LDO38_RS17960;Name=LDO38_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17960;old_locus_tag=BVI2075_440035 NZ_CAJZAL010000146.1 Protein Homology CDS 31832 33355 . + 0 ID=cds-WP_034194836.1;Parent=gene-LDO38_RS17960;Dbxref=GenBank:WP_034194836.1;Name=WP_034194836.1;Ontology_term=GO:0006091,GO:0006099,GO:0004333,GO:0046872,GO:0051539;gbkey=CDS;go_function=fumarate hydratase activity|0004333||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=generation of precursor metabolites and energy|0006091||IEA,tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549402.1;locus_tag=LDO38_RS17960;product=fumarate hydratase;protein_id=WP_034194836.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 33558 34034 . + . ID=gene-LDO38_RS17965;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=LDO38_RS17965;old_locus_tag=BVI2075_440036 NZ_CAJZAL010000146.1 Protein Homology CDS 33558 34034 . + 0 ID=cds-WP_011885484.1;Parent=gene-LDO38_RS17965;Dbxref=GenBank:WP_011885484.1;Name=WP_011885484.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028498.1;locus_tag=LDO38_RS17965;product=bacterioferritin;protein_id=WP_011885484.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 34072 34932 . + . ID=gene-LDO38_RS17970;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=LDO38_RS17970;old_locus_tag=BVI2075_440037 NZ_CAJZAL010000146.1 Protein Homology CDS 34072 34932 . + 0 ID=cds-WP_046428678.1;Parent=gene-LDO38_RS17970;Dbxref=GenBank:WP_046428678.1;Name=WP_046428678.1;Ontology_term=GO:0009252,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723333.1;locus_tag=LDO38_RS17970;product=glutamate racemase;protein_id=WP_046428678.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 35112 35348 . + . ID=gene-LDO38_RS17975;Name=LDO38_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17975;old_locus_tag=BVI2075_440038 NZ_CAJZAL010000146.1 Protein Homology CDS 35112 35348 . + 0 ID=cds-WP_011885486.1;Parent=gene-LDO38_RS17975;Dbxref=GenBank:WP_011885486.1;Name=WP_011885486.1;Ontology_term=GO:0046872,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187745.1;locus_tag=LDO38_RS17975;product=(2Fe-2S)-binding protein;protein_id=WP_011885486.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 35566 36306 . + . ID=gene-LDO38_RS17980;Name=LDO38_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17980;old_locus_tag=BVI2075_440040 NZ_CAJZAL010000146.1 Protein Homology CDS 35566 36306 . + 0 ID=cds-WP_224056546.1;Parent=gene-LDO38_RS17980;Dbxref=GenBank:WP_224056546.1;Name=WP_224056546.1;Ontology_term=GO:0015031,GO:0015891,GO:0055085,GO:0031992,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=energy transducer activity|0031992||IEA;go_process=protein transport|0015031||IEA,siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492728.1;locus_tag=LDO38_RS17980;product=energy transducer TonB;protein_id=WP_224056546.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 36341 37072 . + . ID=gene-LDO38_RS17985;Name=LDO38_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17985;old_locus_tag=BVI2075_440041 NZ_CAJZAL010000146.1 Protein Homology CDS 36341 37072 . + 0 ID=cds-WP_011885488.1;Parent=gene-LDO38_RS17985;Dbxref=GenBank:WP_011885488.1;Name=WP_011885488.1;Ontology_term=GO:0015031,GO:0015252,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=proton channel activity|0015252||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188455.1;locus_tag=LDO38_RS17985;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_011885488.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 37086 37514 . + . ID=gene-LDO38_RS17990;Name=LDO38_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17990;old_locus_tag=BVI2075_440042 NZ_CAJZAL010000146.1 Protein Homology CDS 37086 37514 . + 0 ID=cds-WP_011885489.1;Parent=gene-LDO38_RS17990;Dbxref=GenBank:WP_011885489.1;Name=WP_011885489.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011401478.1;locus_tag=LDO38_RS17990;product=ExbD/TolR family protein;protein_id=WP_011885489.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 37887 38867 . - . ID=gene-LDO38_RS17995;Name=LDO38_RS17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS17995;old_locus_tag=BVI2075_440043 NZ_CAJZAL010000146.1 Protein Homology CDS 37887 38867 . - 0 ID=cds-WP_034194834.1;Parent=gene-LDO38_RS17995;Dbxref=GenBank:WP_034194834.1;Name=WP_034194834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723335.1;locus_tag=LDO38_RS17995;product=LysR family transcriptional regulator;protein_id=WP_034194834.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 38990 39862 . + . ID=gene-LDO38_RS18000;Name=LDO38_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18000;old_locus_tag=BVI2075_440044 NZ_CAJZAL010000146.1 Protein Homology CDS 38990 39862 . + 0 ID=cds-WP_059560269.1;Parent=gene-LDO38_RS18000;Dbxref=GenBank:WP_059560269.1;Name=WP_059560269.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525407.1;locus_tag=LDO38_RS18000;product=pirin family protein;protein_id=WP_059560269.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 39963 40445 . + . ID=gene-LDO38_RS18005;Name=LDO38_RS18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18005;old_locus_tag=BVI2075_440045 NZ_CAJZAL010000146.1 Protein Homology CDS 39963 40445 . + 0 ID=cds-WP_011885492.1;Parent=gene-LDO38_RS18005;Dbxref=GenBank:WP_011885492.1;Name=WP_011885492.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011852697.1;locus_tag=LDO38_RS18005;product=SRPBCC family protein;protein_id=WP_011885492.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 40597 40842 . + . ID=gene-LDO38_RS18010;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=LDO38_RS18010;old_locus_tag=BVI2075_440047 NZ_CAJZAL010000146.1 Protein Homology CDS 40597 40842 . + 0 ID=cds-WP_011885493.1;Parent=gene-LDO38_RS18010;Dbxref=GenBank:WP_011885493.1;Name=WP_011885493.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478306.1;locus_tag=LDO38_RS18010;product=hemin uptake protein HemP;protein_id=WP_011885493.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 41168 42565 . - . ID=gene-LDO38_RS18015;Name=LDO38_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18015;old_locus_tag=BVI2075_440048 NZ_CAJZAL010000146.1 Protein Homology CDS 41168 42565 . - 0 ID=cds-WP_041493864.1;Parent=gene-LDO38_RS18015;Dbxref=GenBank:WP_041493864.1;Name=WP_041493864.1;Ontology_term=GO:0051539;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011852695.1;locus_tag=LDO38_RS18015;product=4Fe-4S binding protein;protein_id=WP_041493864.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 42562 43404 . - . ID=gene-LDO38_RS18020;Name=LDO38_RS18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18020;old_locus_tag=BVI2075_440049 NZ_CAJZAL010000146.1 Protein Homology CDS 42562 43404 . - 0 ID=cds-WP_011885495.1;Parent=gene-LDO38_RS18020;Dbxref=GenBank:WP_011885495.1;Name=WP_011885495.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009914340.1;locus_tag=LDO38_RS18020;product=FTR1 family iron permease;protein_id=WP_011885495.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 43462 43794 . - . ID=gene-LDO38_RS18025;Name=LDO38_RS18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18025;old_locus_tag=BVI2075_440050 NZ_CAJZAL010000146.1 Protein Homology CDS 43462 43794 . - 0 ID=cds-WP_011885496.1;Parent=gene-LDO38_RS18025;Dbxref=GenBank:WP_011885496.1;Name=WP_011885496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530725.1;locus_tag=LDO38_RS18025;product=cupredoxin domain-containing protein;protein_id=WP_011885496.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 43848 44399 . - . ID=gene-LDO38_RS18030;Name=LDO38_RS18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18030;old_locus_tag=BVI2075_440051 NZ_CAJZAL010000146.1 Protein Homology CDS 43848 44399 . - 0 ID=cds-WP_011885497.1;Parent=gene-LDO38_RS18030;Dbxref=GenBank:WP_011885497.1;Name=WP_011885497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407929.1;locus_tag=LDO38_RS18030;product=iron transporter;protein_id=WP_011885497.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 44632 46725 . - . ID=gene-LDO38_RS18035;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=LDO38_RS18035;old_locus_tag=BVI2075_440052 NZ_CAJZAL010000146.1 Protein Homology CDS 44632 46725 . - 0 ID=cds-WP_011885498.1;Parent=gene-LDO38_RS18035;Dbxref=GenBank:WP_011885498.1;Name=WP_011885498.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885498.1;locus_tag=LDO38_RS18035;product=excinuclease ABC subunit UvrB;protein_id=WP_011885498.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 46984 48183 . + . ID=gene-LDO38_RS18040;Name=LDO38_RS18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18040;old_locus_tag=BVI2075_440053 NZ_CAJZAL010000146.1 Protein Homology CDS 46984 48183 . + 0 ID=cds-WP_014723338.1;Parent=gene-LDO38_RS18040;Dbxref=GenBank:WP_014723338.1;Name=WP_014723338.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009932860.1;locus_tag=LDO38_RS18040;product=amino acid aminotransferase;protein_id=WP_014723338.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 48333 49121 . - . ID=gene-LDO38_RS18045;Name=LDO38_RS18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18045;old_locus_tag=BVI2075_440054 NZ_CAJZAL010000146.1 Protein Homology CDS 48333 49121 . - 0 ID=cds-WP_060043487.1;Parent=gene-LDO38_RS18045;Dbxref=GenBank:WP_060043487.1;Name=WP_060043487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885500.1;locus_tag=LDO38_RS18045;product=3-hydroxybutyrate dehydrogenase;protein_id=WP_060043487.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 49284 50255 . + . ID=gene-LDO38_RS18050;Name=LDO38_RS18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18050;old_locus_tag=BVI2075_440055 NZ_CAJZAL010000146.1 Protein Homology CDS 49284 50255 . + 0 ID=cds-WP_011885501.1;Parent=gene-LDO38_RS18050;Dbxref=GenBank:WP_011885501.1;Name=WP_011885501.1;Ontology_term=GO:0015459,GO:0016491,GO:0008076;gbkey=CDS;go_component=voltage-gated potassium channel complex|0008076||IEA;go_function=potassium channel regulator activity|0015459||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004535190.1;locus_tag=LDO38_RS18050;product=potassium channel beta subunit family protein;protein_id=WP_011885501.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 50378 51223 . + . ID=gene-LDO38_RS18055;Name=LDO38_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18055;old_locus_tag=BVI2075_440056 NZ_CAJZAL010000146.1 Protein Homology CDS 50378 51223 . + 0 ID=cds-WP_011885502.1;Parent=gene-LDO38_RS18055;Dbxref=GenBank:WP_011885502.1;Name=WP_011885502.1;Ontology_term=GO:0015976,GO:0070475,GO:0003723,GO:0008988,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=carbon utilization|0015976||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755756.1;locus_tag=LDO38_RS18055;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_011885502.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 51238 51612 . - . ID=gene-LDO38_RS18060;Name=LDO38_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18060;old_locus_tag=BVI2075_440057 NZ_CAJZAL010000146.1 Protein Homology CDS 51238 51612 . - 0 ID=cds-WP_011885503.1;Parent=gene-LDO38_RS18060;Dbxref=GenBank:WP_011885503.1;Name=WP_011885503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483871.1;locus_tag=LDO38_RS18060;product=hypothetical protein;protein_id=WP_011885503.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 51728 51874 . - . ID=gene-LDO38_RS18065;Name=LDO38_RS18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18065;old_locus_tag=BVI2075_440058 NZ_CAJZAL010000146.1 Protein Homology CDS 51728 51874 . - 0 ID=cds-WP_011885504.1;Parent=gene-LDO38_RS18065;Dbxref=GenBank:WP_011885504.1;Name=WP_011885504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763866.1;locus_tag=LDO38_RS18065;product=DUF3563 family protein;protein_id=WP_011885504.1;transl_table=11 NZ_CAJZAL010000146.1 RefSeq gene 52090 52494 . - . ID=gene-LDO38_RS18070;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=LDO38_RS18070;old_locus_tag=BVI2075_440059 NZ_CAJZAL010000146.1 Protein Homology CDS 52090 52494 . - 0 ID=cds-WP_011885505.1;Parent=gene-LDO38_RS18070;Dbxref=GenBank:WP_011885505.1;Name=WP_011885505.1;Ontology_term=GO:0045893,GO:0046688,GO:0003677,GO:0003700,GO:0005507;gbkey=CDS;gene=cueR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,copper ion binding|0005507||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885505.1;locus_tag=LDO38_RS18070;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_011885505.1;transl_table=11 ##sequence-region NZ_CAJZAL010000147.1 1 35301 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000147.1 RefSeq region 1 35301 . + . ID=NZ_CAJZAL010000147.1:1..35301;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_45 NZ_CAJZAL010000147.1 RefSeq gene 1 852 . + . ID=gene-LDO38_RS18075;Name=LDO38_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18075;old_locus_tag=BVI2075_450001;partial=true;start_range=.,1 NZ_CAJZAL010000147.1 Protein Homology CDS 1 852 . + 0 ID=cds-WP_224056547.1;Parent=gene-LDO38_RS18075;Dbxref=GenBank:WP_224056547.1;Name=WP_224056547.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723998.1;locus_tag=LDO38_RS18075;partial=true;product=ABC transporter permease;protein_id=WP_224056547.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 849 1805 . + . ID=gene-LDO38_RS18080;Name=LDO38_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18080;old_locus_tag=BVI2075_450002 NZ_CAJZAL010000147.1 Protein Homology CDS 849 1805 . + 0 ID=cds-WP_014723999.1;Parent=gene-LDO38_RS18080;Dbxref=GenBank:WP_014723999.1;Name=WP_014723999.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115358.1;locus_tag=LDO38_RS18080;product=ABC transporter ATP-binding protein;protein_id=WP_014723999.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 1802 2584 . + . ID=gene-LDO38_RS18085;Name=LDO38_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18085;old_locus_tag=BVI2075_450003 NZ_CAJZAL010000147.1 Protein Homology CDS 1802 2584 . + 0 ID=cds-WP_011880806.1;Parent=gene-LDO38_RS18085;Dbxref=GenBank:WP_011880806.1;Name=WP_011880806.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880806.1;locus_tag=LDO38_RS18085;product=ABC transporter permease;protein_id=WP_011880806.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 2790 3473 . + . ID=gene-LDO38_RS18090;Name=LDO38_RS18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18090;old_locus_tag=BVI2075_450004 NZ_CAJZAL010000147.1 Protein Homology CDS 2790 3473 . + 0 ID=cds-WP_034195510.1;Parent=gene-LDO38_RS18090;Dbxref=GenBank:WP_034195510.1;Name=WP_034195510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480599.1;locus_tag=LDO38_RS18090;product=lytic transglycosylase domain-containing protein;protein_id=WP_034195510.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 3487 3927 . - . ID=gene-LDO38_RS18095;Name=LDO38_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18095;old_locus_tag=BVI2075_450005 NZ_CAJZAL010000147.1 Protein Homology CDS 3487 3927 . - 0 ID=cds-WP_034195511.1;Parent=gene-LDO38_RS18095;Dbxref=GenBank:WP_034195511.1;Name=WP_034195511.1;Ontology_term=GO:0046654,GO:0046656,GO:0004150;gbkey=CDS;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA,folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749884.1;locus_tag=LDO38_RS18095;product=dihydroneopterin aldolase;protein_id=WP_034195511.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 3924 4553 . - . ID=gene-LDO38_RS18100;Name=LDO38_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18100;old_locus_tag=BVI2075_450006 NZ_CAJZAL010000147.1 Protein Homology CDS 3924 4553 . - 0 ID=cds-WP_034195512.1;Parent=gene-LDO38_RS18100;Dbxref=GenBank:WP_034195512.1;Name=WP_034195512.1;Ontology_term=GO:1901053,GO:0008115;gbkey=CDS;go_function=sarcosine oxidase activity|0008115||IEA;go_process=sarcosine catabolic process|1901053||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496827.1;locus_tag=LDO38_RS18100;product=sarcosine oxidase subunit gamma;protein_id=WP_034195512.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 4543 7554 . - . ID=gene-LDO38_RS18105;Name=LDO38_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18105;old_locus_tag=BVI2075_450007 NZ_CAJZAL010000147.1 Protein Homology CDS 4543 7554 . - 0 ID=cds-WP_059568761.1;Parent=gene-LDO38_RS18105;Dbxref=GenBank:WP_059568761.1;Name=WP_059568761.1;Ontology_term=GO:0046653,GO:0008115;gbkey=CDS;go_function=sarcosine oxidase activity|0008115||IEA;go_process=tetrahydrofolate metabolic process|0046653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354097.1;locus_tag=LDO38_RS18105;product=sarcosine oxidase subunit alpha family protein;protein_id=WP_059568761.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 7551 7847 . - . ID=gene-LDO38_RS18110;Name=LDO38_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18110;old_locus_tag=BVI2075_450008 NZ_CAJZAL010000147.1 Protein Homology CDS 7551 7847 . - 0 ID=cds-WP_011880811.1;Parent=gene-LDO38_RS18110;Dbxref=GenBank:WP_011880811.1;Name=WP_011880811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547035.1;locus_tag=LDO38_RS18110;product=sarcosine oxidase subunit delta;protein_id=WP_011880811.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 7874 9118 . - . ID=gene-LDO38_RS18115;Name=LDO38_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18115;old_locus_tag=BVI2075_450009 NZ_CAJZAL010000147.1 Protein Homology CDS 7874 9118 . - 0 ID=cds-WP_011880812.1;Parent=gene-LDO38_RS18115;Dbxref=GenBank:WP_011880812.1;Name=WP_011880812.1;Ontology_term=GO:0046653,GO:0008115;gbkey=CDS;go_function=sarcosine oxidase activity|0008115||IEA;go_process=tetrahydrofolate metabolic process|0046653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017773687.1;locus_tag=LDO38_RS18115;product=sarcosine oxidase subunit beta family protein;protein_id=WP_011880812.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 9134 10519 . - . ID=gene-LDO38_RS18120;Name=LDO38_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18120;old_locus_tag=BVI2075_450010 NZ_CAJZAL010000147.1 Protein Homology CDS 9134 10519 . - 0 ID=cds-WP_011880813.1;Parent=gene-LDO38_RS18120;Dbxref=GenBank:WP_011880813.1;Name=WP_011880813.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009981714.1;locus_tag=LDO38_RS18120;product=L-serine ammonia-lyase;protein_id=WP_011880813.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 10761 11852 . + . ID=gene-LDO38_RS18125;Name=LDO38_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18125;old_locus_tag=BVI2075_450011 NZ_CAJZAL010000147.1 Protein Homology CDS 10761 11852 . + 0 ID=cds-WP_069246420.1;Parent=gene-LDO38_RS18125;Dbxref=GenBank:WP_069246420.1;Name=WP_069246420.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489138.1;locus_tag=LDO38_RS18125;product=GlxA family transcriptional regulator;protein_id=WP_069246420.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 11997 12773 . + . ID=gene-LDO38_RS18130;Name=otnI;gbkey=Gene;gene=otnI;gene_biotype=protein_coding;locus_tag=LDO38_RS18130;old_locus_tag=BVI2075_450012 NZ_CAJZAL010000147.1 Protein Homology CDS 11997 12773 . + 0 ID=cds-WP_059562116.1;Parent=gene-LDO38_RS18130;Dbxref=GenBank:WP_059562116.1;Name=WP_059562116.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;gene=otnI;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004549750.1;locus_tag=LDO38_RS18130;product=2-oxo-tetronate isomerase;protein_id=WP_059562116.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 12967 13494 . + . ID=gene-LDO38_RS18135;Name=LDO38_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18135;old_locus_tag=BVI2075_450013 NZ_CAJZAL010000147.1 Protein Homology CDS 12967 13494 . + 0 ID=cds-WP_059462665.1;Parent=gene-LDO38_RS18135;Dbxref=GenBank:WP_059462665.1;Name=WP_059462665.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749899.1;locus_tag=LDO38_RS18135;product=cytochrome b;protein_id=WP_059462665.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 13983 14672 . + . ID=gene-LDO38_RS18140;Name=LDO38_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18140;old_locus_tag=BVI2075_450014 NZ_CAJZAL010000147.1 Protein Homology CDS 13983 14672 . + 0 ID=cds-WP_014724003.1;Parent=gene-LDO38_RS18140;Dbxref=GenBank:WP_014724003.1;Name=WP_014724003.1;Ontology_term=GO:0018193;gbkey=CDS;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603926.1;locus_tag=LDO38_RS18140;product=aspartyl/asparaginyl beta-hydroxylase domain-containing protein;protein_id=WP_014724003.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 14701 15642 . - . ID=gene-LDO38_RS18145;Name=LDO38_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18145;old_locus_tag=BVI2075_450015 NZ_CAJZAL010000147.1 Protein Homology CDS 14701 15642 . - 0 ID=cds-WP_011880818.1;Parent=gene-LDO38_RS18145;Dbxref=GenBank:WP_011880818.1;Name=WP_011880818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659527.1;locus_tag=LDO38_RS18145;product=LysR substrate-binding domain-containing protein;protein_id=WP_011880818.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 15721 16119 . + . ID=gene-LDO38_RS18150;Name=LDO38_RS18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18150;old_locus_tag=BVI2075_450016 NZ_CAJZAL010000147.1 Protein Homology CDS 15721 16119 . + 0 ID=cds-WP_046423131.1;Parent=gene-LDO38_RS18150;Dbxref=GenBank:WP_046423131.1;Name=WP_046423131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757403.1;locus_tag=LDO38_RS18150;product=nuclear transport factor 2 family protein;protein_id=WP_046423131.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 16268 16537 . + . ID=gene-LDO38_RS18155;Name=LDO38_RS18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18155;old_locus_tag=BVI2075_450018 NZ_CAJZAL010000147.1 Protein Homology CDS 16268 16537 . + 0 ID=cds-WP_011880820.1;Parent=gene-LDO38_RS18155;Dbxref=GenBank:WP_011880820.1;Name=WP_011880820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724006.1;locus_tag=LDO38_RS18155;product=MoaD/ThiS family protein;protein_id=WP_011880820.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 16593 17714 . + . ID=gene-LDO38_RS18160;Name=LDO38_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18160;old_locus_tag=BVI2075_450019 NZ_CAJZAL010000147.1 Protein Homology CDS 16593 17714 . + 0 ID=cds-WP_011880821.1;Parent=gene-LDO38_RS18160;Dbxref=GenBank:WP_011880821.1;Name=WP_011880821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480576.1;locus_tag=LDO38_RS18160;product=WD40/YVTN/BNR-like repeat-containing protein;protein_id=WP_011880821.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 17770 18717 . - . ID=gene-LDO38_RS18165;Name=LDO38_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18165;old_locus_tag=BVI2075_450020 NZ_CAJZAL010000147.1 Protein Homology CDS 17770 18717 . - 0 ID=cds-WP_014724007.1;Parent=gene-LDO38_RS18165;Dbxref=GenBank:WP_014724007.1;Name=WP_014724007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354069.1;locus_tag=LDO38_RS18165;product=choline ABC transporter substrate-binding protein;protein_id=WP_014724007.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 18838 19833 . - . ID=gene-LDO38_RS18170;Name=LDO38_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18170;old_locus_tag=BVI2075_450021 NZ_CAJZAL010000147.1 Protein Homology CDS 18838 19833 . - 0 ID=cds-WP_011880823.1;Parent=gene-LDO38_RS18170;Dbxref=GenBank:WP_011880823.1;Name=WP_011880823.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413023.1;locus_tag=LDO38_RS18170;product=GlxA family transcriptional regulator;protein_id=WP_011880823.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 19947 20843 . - . ID=gene-LDO38_RS18175;Name=choW;gbkey=Gene;gene=choW;gene_biotype=protein_coding;locus_tag=LDO38_RS18175;old_locus_tag=BVI2075_450022 NZ_CAJZAL010000147.1 Protein Homology CDS 19947 20843 . - 0 ID=cds-WP_011880824.1;Parent=gene-LDO38_RS18175;Dbxref=GenBank:WP_011880824.1;Name=WP_011880824.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=choW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200833.1;locus_tag=LDO38_RS18175;product=choline ABC transporter permease subunit;protein_id=WP_011880824.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq pseudogene 20836 22509 . - . ID=gene-LDO38_RS18180;Name=LDO38_RS18180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS18180;old_locus_tag=BVI2075_450023;pseudo=true NZ_CAJZAL010000147.1 Protein Homology CDS 20836 22509 . - 0 ID=cds-LDO38_RS18180;Parent=gene-LDO38_RS18180;Note=frameshifted;Ontology_term=GO:0015697,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=quaternary ammonium group transport|0015697||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853386.1;locus_tag=LDO38_RS18180;product=quaternary amine ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 22604 26017 . + . ID=gene-LDO38_RS18185;Name=LDO38_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18185;old_locus_tag=BVI2075_450024 NZ_CAJZAL010000147.1 Protein Homology CDS 22604 26017 . + 0 ID=cds-WP_224056548.1;Parent=gene-LDO38_RS18185;Dbxref=GenBank:WP_224056548.1;Name=WP_224056548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724009.1;locus_tag=LDO38_RS18185;product=DUF2339 domain-containing protein;protein_id=WP_224056548.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 26014 27372 . + . ID=gene-LDO38_RS18190;Name=LDO38_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18190;old_locus_tag=BVI2075_450025 NZ_CAJZAL010000147.1 Protein Homology CDS 26014 27372 . + 0 ID=cds-WP_224056549.1;Parent=gene-LDO38_RS18190;Dbxref=GenBank:WP_224056549.1;Name=WP_224056549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724010.1;locus_tag=LDO38_RS18190;product=DUF3999 domain-containing protein;protein_id=WP_224056549.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 27488 27793 . + . ID=gene-LDO38_RS18195;Name=LDO38_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18195;old_locus_tag=BVI2075_450026 NZ_CAJZAL010000147.1 Protein Homology CDS 27488 27793 . + 0 ID=cds-WP_011880828.1;Parent=gene-LDO38_RS18195;Dbxref=GenBank:WP_011880828.1;Name=WP_011880828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331318.1;locus_tag=LDO38_RS18195;product=NIPSNAP family protein;protein_id=WP_011880828.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 28082 28732 . + . ID=gene-LDO38_RS18200;Name=LDO38_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18200;old_locus_tag=BVI2075_450027 NZ_CAJZAL010000147.1 Protein Homology CDS 28082 28732 . + 0 ID=cds-WP_014724011.1;Parent=gene-LDO38_RS18200;Dbxref=GenBank:WP_014724011.1;Name=WP_014724011.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396284.1;locus_tag=LDO38_RS18200;product=NADPH-dependent FMN reductase;protein_id=WP_014724011.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 28943 29161 . + . ID=gene-LDO38_RS18205;Name=LDO38_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18205;old_locus_tag=BVI2075_450028 NZ_CAJZAL010000147.1 Protein Homology CDS 28943 29161 . + 0 ID=cds-WP_006749916.1;Parent=gene-LDO38_RS18205;Dbxref=GenBank:WP_006749916.1;Name=WP_006749916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898447.1;locus_tag=LDO38_RS18205;product=hypothetical protein;protein_id=WP_006749916.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 29254 30156 . + . ID=gene-LDO38_RS18210;Name=LDO38_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18210;old_locus_tag=BVI2075_450029 NZ_CAJZAL010000147.1 Protein Homology CDS 29254 30156 . + 0 ID=cds-WP_060091618.1;Parent=gene-LDO38_RS18210;Dbxref=GenBank:WP_060091618.1;Name=WP_060091618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009934541.1;locus_tag=LDO38_RS18210;product=hypothetical protein;protein_id=WP_060091618.1;transl_table=11 NZ_CAJZAL010000147.1 RefSeq gene 31286 35301 . + . ID=gene-LDO38_RS18215;Name=LDO38_RS18215;end_range=35301,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18215;partial=true NZ_CAJZAL010000147.1 Protein Homology CDS 31286 35301 . + 0 ID=cds-WP_290371187.1;Parent=gene-LDO38_RS18215;Dbxref=GenBank:WP_290371187.1;Name=WP_290371187.1;end_range=35301,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354054.1;locus_tag=LDO38_RS18215;partial=true;product=ESPR-type extended signal peptide-containing protein;protein_id=WP_290371187.1;transl_table=11 ##sequence-region NZ_CAJZAL010000148.1 1 20496 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000148.1 RefSeq region 1 20496 . + . ID=NZ_CAJZAL010000148.1:1..20496;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_46 NZ_CAJZAL010000148.1 RefSeq gene 1 269 . + . ID=gene-LDO38_RS30580;Name=LDO38_RS30580;end_range=269,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30580;old_locus_tag=BVI2075_460001;partial=true;start_range=.,1 NZ_CAJZAL010000148.1 Protein Homology CDS 1 269 . + 2 ID=cds-WP_435520956.1;Parent=gene-LDO38_RS30580;Dbxref=GenBank:WP_435520956.1;Name=WP_435520956.1;Ontology_term=GO:0009058,GO:0030170;end_range=269,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694762.1;locus_tag=LDO38_RS30580;partial=true;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_435520956.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000148.1 RefSeq gene 280 1097 . + . ID=gene-LDO38_RS18220;Name=LDO38_RS18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18220;old_locus_tag=BVI2075_460002;partial=true;start_range=.,280 NZ_CAJZAL010000148.1 Protein Homology CDS 280 1097 . + 2 ID=cds-WP_435520957.1;Parent=gene-LDO38_RS18220;Dbxref=GenBank:WP_435520957.1;Name=WP_435520957.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882335.1;locus_tag=LDO38_RS18220;partial=true;product=PLP-dependent aminotransferase family protein;protein_id=WP_435520957.1;start_range=.,280;transl_table=11 NZ_CAJZAL010000148.1 RefSeq gene 1217 2470 . - . ID=gene-LDO38_RS18225;Name=LDO38_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18225;old_locus_tag=BVI2075_460003 NZ_CAJZAL010000148.1 Protein Homology CDS 1217 2470 . - 0 ID=cds-WP_059696270.1;Parent=gene-LDO38_RS18225;Dbxref=GenBank:WP_059696270.1;Name=WP_059696270.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724801.1;locus_tag=LDO38_RS18225;product=MFS transporter;protein_id=WP_059696270.1;transl_table=11 NZ_CAJZAL010000148.1 RefSeq gene 2624 3499 . + . ID=gene-LDO38_RS18230;Name=LDO38_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18230;old_locus_tag=BVI2075_460004 NZ_CAJZAL010000148.1 Protein Homology CDS 2624 3499 . + 0 ID=cds-WP_046426409.1;Parent=gene-LDO38_RS18230;Dbxref=GenBank:WP_046426409.1;Name=WP_046426409.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658949.1;locus_tag=LDO38_RS18230;product=LysR family transcriptional regulator;protein_id=WP_046426409.1;transl_table=11 NZ_CAJZAL010000148.1 RefSeq gene 3775 5403 . + . ID=gene-LDO38_RS18235;Name=LDO38_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18235;old_locus_tag=BVI2075_460005 NZ_CAJZAL010000148.1 Protein Homology CDS 3775 5403 . + 0 ID=cds-WP_124260088.1;Parent=gene-LDO38_RS18235;Dbxref=GenBank:WP_124260088.1;Name=WP_124260088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724803.1;locus_tag=LDO38_RS18235;product=trypsin-like peptidase domain-containing protein;protein_id=WP_124260088.1;transl_table=11 NZ_CAJZAL010000148.1 RefSeq gene 5631 6833 . + . ID=gene-LDO38_RS18240;Name=LDO38_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18240;old_locus_tag=BVI2075_460006 NZ_CAJZAL010000148.1 Protein Homology CDS 5631 6833 . + 0 ID=cds-WP_069246477.1;Parent=gene-LDO38_RS18240;Dbxref=GenBank:WP_069246477.1;Name=WP_069246477.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724804.1;locus_tag=LDO38_RS18240;product=MFS transporter;protein_id=WP_069246477.1;transl_table=11 NZ_CAJZAL010000148.1 RefSeq gene 6960 7658 . - . ID=gene-LDO38_RS18245;Name=LDO38_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18245;old_locus_tag=BVI2075_460007 NZ_CAJZAL010000148.1 Protein Homology CDS 6960 7658 . - 0 ID=cds-WP_011882330.1;Parent=gene-LDO38_RS18245;Dbxref=GenBank:WP_011882330.1;Name=WP_011882330.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483786.1;locus_tag=LDO38_RS18245;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_011882330.1;transl_table=11 NZ_CAJZAL010000148.1 RefSeq gene 7787 8755 . - . ID=gene-LDO38_RS18250;Name=LDO38_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18250;old_locus_tag=BVI2075_460008 NZ_CAJZAL010000148.1 Protein Homology CDS 7787 8755 . - 0 ID=cds-WP_014724805.1;Parent=gene-LDO38_RS18250;Dbxref=GenBank:WP_014724805.1;Name=WP_014724805.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724805.1;locus_tag=LDO38_RS18250;product=helix-turn-helix transcriptional regulator;protein_id=WP_014724805.1;transl_table=11 NZ_CAJZAL010000148.1 RefSeq gene 8888 9670 . - . ID=gene-LDO38_RS18255;Name=LDO38_RS18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18255;old_locus_tag=BVI2075_460009 NZ_CAJZAL010000148.1 Protein Homology CDS 8888 9670 . - 0 ID=cds-WP_069240630.1;Parent=gene-LDO38_RS18255;Dbxref=GenBank:WP_069240630.1;Name=WP_069240630.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882328.1;locus_tag=LDO38_RS18255;product=YkgJ family cysteine cluster protein;protein_id=WP_069240630.1;transl_table=11 NZ_CAJZAL010000148.1 RefSeq gene 9732 10337 . - . ID=gene-LDO38_RS18260;Name=LDO38_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18260;old_locus_tag=BVI2075_460010 NZ_CAJZAL010000148.1 Protein Homology CDS 9732 10337 . - 0 ID=cds-WP_059464085.1;Parent=gene-LDO38_RS18260;Dbxref=GenBank:WP_059464085.1;Name=WP_059464085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882327.1;locus_tag=LDO38_RS18260;product=uracil-DNA glycosylase family protein;protein_id=WP_059464085.1;transl_table=11 NZ_CAJZAL010000148.1 RefSeq gene 10450 11493 . - . ID=gene-LDO38_RS18265;Name=LDO38_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18265;old_locus_tag=BVI2075_460011 NZ_CAJZAL010000148.1 Protein Homology CDS 10450 11493 . - 0 ID=cds-WP_011882326.1;Parent=gene-LDO38_RS18265;Dbxref=GenBank:WP_011882326.1;Name=WP_011882326.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882326.1;locus_tag=LDO38_RS18265;product=CmpA/NrtA family ABC transporter substrate-binding protein;protein_id=WP_011882326.1;transl_table=11 NZ_CAJZAL010000148.1 RefSeq gene 11499 12092 . - . ID=gene-LDO38_RS18270;Name=LDO38_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18270;old_locus_tag=BVI2075_460012 NZ_CAJZAL010000148.1 Protein Homology CDS 11499 12092 . - 0 ID=cds-WP_011882325.1;Parent=gene-LDO38_RS18270;Dbxref=GenBank:WP_011882325.1;Name=WP_011882325.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882325.1;locus_tag=LDO38_RS18270;product=ANTAR domain-containing response regulator;protein_id=WP_011882325.1;transl_table=11 NZ_CAJZAL010000148.1 RefSeq gene 12271 13041 . - . ID=gene-LDO38_RS18275;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=LDO38_RS18275;old_locus_tag=BVI2075_460013 NZ_CAJZAL010000148.1 Protein Homology CDS 12271 13041 . - 0 ID=cds-WP_014724809.1;Parent=gene-LDO38_RS18275;Dbxref=GenBank:WP_014724809.1;Name=WP_014724809.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724809.1;locus_tag=LDO38_RS18275;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_014724809.1;transl_table=11 NZ_CAJZAL010000148.1 RefSeq gene 13712 15037 . + . ID=gene-LDO38_RS18280;Name=LDO38_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18280;old_locus_tag=BVI2075_460014 NZ_CAJZAL010000148.1 Protein Homology CDS 13712 15037 . + 0 ID=cds-WP_011882322.1;Parent=gene-LDO38_RS18280;Dbxref=GenBank:WP_011882322.1;Name=WP_011882322.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494732.1;locus_tag=LDO38_RS18280;product=MFS transporter;protein_id=WP_011882322.1;transl_table=11 NZ_CAJZAL010000148.1 RefSeq gene 15059 17632 . + . ID=gene-LDO38_RS18285;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=LDO38_RS18285;old_locus_tag=BVI2075_460015 NZ_CAJZAL010000148.1 Protein Homology CDS 15059 17632 . + 0 ID=cds-WP_224056550.1;Parent=gene-LDO38_RS18285;Dbxref=GenBank:WP_224056550.1;Name=WP_224056550.1;Ontology_term=GO:0042128,GO:0008942,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882321.1;locus_tag=LDO38_RS18285;product=nitrite reductase large subunit NirB;protein_id=WP_224056550.1;transl_table=11 NZ_CAJZAL010000148.1 RefSeq gene 17670 18017 . + . ID=gene-LDO38_RS18290;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=LDO38_RS18290;old_locus_tag=BVI2075_460016 NZ_CAJZAL010000148.1 Protein Homology CDS 17670 18017 . + 0 ID=cds-WP_014724812.1;Parent=gene-LDO38_RS18290;Dbxref=GenBank:WP_014724812.1;Name=WP_014724812.1;Ontology_term=GO:0008942,GO:0051537;gbkey=CDS;gene=nirD;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396957.1;locus_tag=LDO38_RS18290;product=nitrite reductase small subunit NirD;protein_id=WP_014724812.1;transl_table=11 NZ_CAJZAL010000148.1 RefSeq gene 18034 20365 . + . ID=gene-LDO38_RS18295;Name=LDO38_RS18295;end_range=20365,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18295;old_locus_tag=BVI2075_460017;partial=true NZ_CAJZAL010000148.1 Protein Homology CDS 18034 20365 . + 0 ID=cds-WP_435520958.1;Parent=gene-LDO38_RS18295;Dbxref=GenBank:WP_435520958.1;Name=WP_435520958.1;Ontology_term=GO:0015942,GO:0008863;end_range=20365,.;gbkey=CDS;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329195.1;locus_tag=LDO38_RS18295;partial=true;product=molybdopterin oxidoreductase family protein;protein_id=WP_435520958.1;transl_table=11 ##sequence-region NZ_CAJZAL010000149.1 1 27802 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000149.1 RefSeq region 1 27802 . + . ID=NZ_CAJZAL010000149.1:1..27802;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_47 NZ_CAJZAL010000149.1 RefSeq gene 122 2581 . + . ID=gene-LDO38_RS18300;Name=LDO38_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18300;old_locus_tag=BVI2075_470001 NZ_CAJZAL010000149.1 Protein Homology CDS 122 2581 . + 0 ID=cds-WP_045577688.1;Parent=gene-LDO38_RS18300;Dbxref=GenBank:WP_045577688.1;Name=WP_045577688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724048.1;locus_tag=LDO38_RS18300;product=DUF3772 domain-containing protein;protein_id=WP_045577688.1;transl_table=11 NZ_CAJZAL010000149.1 RefSeq gene 2712 4223 . - . ID=gene-LDO38_RS18305;Name=amaB;gbkey=Gene;gene=amaB;gene_biotype=protein_coding;gene_synonym=amaA;locus_tag=LDO38_RS18305;old_locus_tag=BVI2075_470002 NZ_CAJZAL010000149.1 Protein Homology CDS 2712 4223 . - 0 ID=cds-WP_034194750.1;Parent=gene-LDO38_RS18305;Dbxref=GenBank:WP_034194750.1;Name=WP_034194750.1;gbkey=CDS;gene=amaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880871.1;locus_tag=LDO38_RS18305;product=L-piperidine-6-carboxylate dehydrogenase;protein_id=WP_034194750.1;transl_table=11 NZ_CAJZAL010000149.1 RefSeq gene 4847 6115 . + . ID=gene-LDO38_RS18310;Name=LDO38_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18310;old_locus_tag=BVI2075_470004 NZ_CAJZAL010000149.1 Protein Homology CDS 4847 6115 . + 0 ID=cds-WP_011880872.1;Parent=gene-LDO38_RS18310;Dbxref=GenBank:WP_011880872.1;Name=WP_011880872.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898382.1;locus_tag=LDO38_RS18310;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_011880872.1;transl_table=11 NZ_CAJZAL010000149.1 RefSeq gene 6232 6906 . + . ID=gene-LDO38_RS18315;Name=LDO38_RS18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18315;old_locus_tag=BVI2075_470005 NZ_CAJZAL010000149.1 Protein Homology CDS 6232 6906 . + 0 ID=cds-WP_034194751.1;Parent=gene-LDO38_RS18315;Dbxref=GenBank:WP_034194751.1;Name=WP_034194751.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366853.1;locus_tag=LDO38_RS18315;product=TetR family transcriptional regulator;protein_id=WP_034194751.1;transl_table=11 NZ_CAJZAL010000149.1 RefSeq gene 7040 8824 . - . ID=gene-LDO38_RS18320;Name=LDO38_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18320;old_locus_tag=BVI2075_470006 NZ_CAJZAL010000149.1 Protein Homology CDS 7040 8824 . - 0 ID=cds-WP_059568034.1;Parent=gene-LDO38_RS18320;Dbxref=GenBank:WP_059568034.1;Name=WP_059568034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758666.1;locus_tag=LDO38_RS18320;product=phospholipase D-like domain-containing protein;protein_id=WP_059568034.1;transl_table=11 NZ_CAJZAL010000149.1 RefSeq gene 8929 9687 . - . ID=gene-LDO38_RS18325;Name=LDO38_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18325;old_locus_tag=BVI2075_470008 NZ_CAJZAL010000149.1 Protein Homology CDS 8929 9687 . - 0 ID=cds-WP_014724053.1;Parent=gene-LDO38_RS18325;Dbxref=GenBank:WP_014724053.1;Name=WP_014724053.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546920.1;locus_tag=LDO38_RS18325;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_014724053.1;transl_table=11 NZ_CAJZAL010000149.1 RefSeq gene 9888 10073 . + . ID=gene-LDO38_RS18330;Name=LDO38_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18330;old_locus_tag=BVI2075_470009 NZ_CAJZAL010000149.1 Protein Homology CDS 9888 10073 . + 0 ID=cds-WP_011880876.1;Parent=gene-LDO38_RS18330;Dbxref=GenBank:WP_011880876.1;Name=WP_011880876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853420.1;locus_tag=LDO38_RS18330;product=hypothetical protein;protein_id=WP_011880876.1;transl_table=11 NZ_CAJZAL010000149.1 RefSeq gene 10310 11179 . + . ID=gene-LDO38_RS18335;Name=LDO38_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18335;old_locus_tag=BVI2075_470010 NZ_CAJZAL010000149.1 Protein Homology CDS 10310 11179 . + 0 ID=cds-WP_046424465.1;Parent=gene-LDO38_RS18335;Dbxref=GenBank:WP_046424465.1;Name=WP_046424465.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331232.1;locus_tag=LDO38_RS18335;product=DMT family transporter;protein_id=WP_046424465.1;transl_table=11 NZ_CAJZAL010000149.1 RefSeq gene 11455 12303 . + . ID=gene-LDO38_RS18340;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=LDO38_RS18340;old_locus_tag=BVI2075_470012 NZ_CAJZAL010000149.1 Protein Homology CDS 11455 12303 . + 0 ID=cds-WP_059462751.1;Parent=gene-LDO38_RS18340;Dbxref=GenBank:WP_059462751.1;Name=WP_059462751.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366857.1;locus_tag=LDO38_RS18340;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_059462751.1;transl_table=11 NZ_CAJZAL010000149.1 RefSeq gene 12391 14067 . - . ID=gene-LDO38_RS18345;Name=LDO38_RS18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18345;old_locus_tag=BVI2075_470013 NZ_CAJZAL010000149.1 Protein Homology CDS 12391 14067 . - 0 ID=cds-WP_011880879.1;Parent=gene-LDO38_RS18345;Dbxref=GenBank:WP_011880879.1;Name=WP_011880879.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353985.1;locus_tag=LDO38_RS18345;product=S10 family peptidase;protein_id=WP_011880879.1;transl_table=11 NZ_CAJZAL010000149.1 RefSeq gene 14140 15726 . - . ID=gene-LDO38_RS18350;Name=LDO38_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18350;old_locus_tag=BVI2075_470014 NZ_CAJZAL010000149.1 Protein Homology CDS 14140 15726 . - 0 ID=cds-WP_069224736.1;Parent=gene-LDO38_RS18350;Dbxref=GenBank:WP_069224736.1;Name=WP_069224736.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339395.1;locus_tag=LDO38_RS18350;product=S53 family peptidase;protein_id=WP_069224736.1;transl_table=11 NZ_CAJZAL010000149.1 RefSeq gene 15985 16608 . - . ID=gene-LDO38_RS18355;Name=LDO38_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18355;old_locus_tag=BVI2075_470017 NZ_CAJZAL010000149.1 Protein Homology CDS 15985 16608 . - 0 ID=cds-WP_011880881.1;Parent=gene-LDO38_RS18355;Dbxref=GenBank:WP_011880881.1;Name=WP_011880881.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752375.1;locus_tag=LDO38_RS18355;product=LysE family translocator;protein_id=WP_011880881.1;transl_table=11 NZ_CAJZAL010000149.1 RefSeq gene 16742 17206 . + . ID=gene-LDO38_RS18360;Name=LDO38_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18360;old_locus_tag=BVI2075_470018 NZ_CAJZAL010000149.1 Protein Homology CDS 16742 17206 . + 0 ID=cds-WP_011880882.1;Parent=gene-LDO38_RS18360;Dbxref=GenBank:WP_011880882.1;Name=WP_011880882.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188527.1;locus_tag=LDO38_RS18360;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011880882.1;transl_table=11 NZ_CAJZAL010000149.1 RefSeq gene 17264 18175 . - . ID=gene-LDO38_RS18365;Name=LDO38_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18365;old_locus_tag=BVI2075_470019 NZ_CAJZAL010000149.1 Protein Homology CDS 17264 18175 . - 0 ID=cds-WP_046424456.1;Parent=gene-LDO38_RS18365;Dbxref=GenBank:WP_046424456.1;Name=WP_046424456.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880883.1;locus_tag=LDO38_RS18365;product=LysR family transcriptional regulator;protein_id=WP_046424456.1;transl_table=11 NZ_CAJZAL010000149.1 RefSeq gene 18315 19271 . + . ID=gene-LDO38_RS18370;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=LDO38_RS18370;old_locus_tag=BVI2075_470020 NZ_CAJZAL010000149.1 Protein Homology CDS 18315 19271 . + 0 ID=cds-WP_034194754.1;Parent=gene-LDO38_RS18370;Dbxref=GenBank:WP_034194754.1;Name=WP_034194754.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766488.1;locus_tag=LDO38_RS18370;product=agmatinase;protein_id=WP_034194754.1;transl_table=11 NZ_CAJZAL010000149.1 RefSeq gene 19377 21680 . - . ID=gene-LDO38_RS18375;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=LDO38_RS18375;old_locus_tag=BVI2075_470021 NZ_CAJZAL010000149.1 Protein Homology CDS 19377 21680 . - 0 ID=cds-WP_059991748.1;Parent=gene-LDO38_RS18375;Dbxref=GenBank:WP_059991748.1;Name=WP_059991748.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880885.1;locus_tag=LDO38_RS18375;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_059991748.1;transl_table=11 NZ_CAJZAL010000149.1 RefSeq gene 21790 22698 . + . ID=gene-LDO38_RS18380;Name=LDO38_RS18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18380;old_locus_tag=BVI2075_470022 NZ_CAJZAL010000149.1 Protein Homology CDS 21790 22698 . + 0 ID=cds-WP_034194758.1;Parent=gene-LDO38_RS18380;Dbxref=GenBank:WP_034194758.1;Name=WP_034194758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758655.1;locus_tag=LDO38_RS18380;product=LysR family transcriptional regulator;protein_id=WP_034194758.1;transl_table=11 NZ_CAJZAL010000149.1 RefSeq gene 22852 24444 . + . ID=gene-LDO38_RS18385;Name=LDO38_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18385;old_locus_tag=BVI2075_470023 NZ_CAJZAL010000149.1 Protein Homology CDS 22852 24444 . + 0 ID=cds-WP_059460976.1;Parent=gene-LDO38_RS18385;Dbxref=GenBank:WP_059460976.1;Name=WP_059460976.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488499.1;locus_tag=LDO38_RS18385;product=inorganic phosphate transporter;protein_id=WP_059460976.1;transl_table=11 NZ_CAJZAL010000149.1 RefSeq gene 24765 25508 . + . ID=gene-LDO38_RS18390;Name=LDO38_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18390;old_locus_tag=BVI2075_470024 NZ_CAJZAL010000149.1 Protein Homology CDS 24765 25508 . + 0 ID=cds-WP_014724063.1;Parent=gene-LDO38_RS18390;Dbxref=GenBank:WP_014724063.1;Name=WP_014724063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724063.1;locus_tag=LDO38_RS18390;product=2OG-Fe(II) oxygenase;protein_id=WP_014724063.1;transl_table=11 NZ_CAJZAL010000149.1 RefSeq gene 26020 27447 . - . ID=gene-LDO38_RS18395;Name=LDO38_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18395;old_locus_tag=BVI2075_470025 NZ_CAJZAL010000149.1 Protein Homology CDS 26020 27447 . - 0 ID=cds-WP_059475927.1;Parent=gene-LDO38_RS18395;Dbxref=GenBank:WP_059475927.1;Name=WP_059475927.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880889.1;locus_tag=LDO38_RS18395;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_059475927.1;transl_table=11 ##sequence-region NZ_CAJZAL010000150.1 1 78018 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000150.1 RefSeq region 1 78018 . + . ID=NZ_CAJZAL010000150.1:1..78018;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_48 NZ_CAJZAL010000150.1 RefSeq gene 1 152 . - . ID=gene-LDO38_RS18400;Name=LDO38_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18400;partial=true;start_range=.,1 NZ_CAJZAL010000150.1 Protein Homology CDS 1 152 . - 0 ID=cds-WP_124627112.1;Parent=gene-LDO38_RS18400;Dbxref=GenBank:WP_124627112.1;Name=WP_124627112.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725605.1;locus_tag=LDO38_RS18400;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_124627112.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 187 1977 . - . ID=gene-LDO38_RS18405;Name=LDO38_RS18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18405;old_locus_tag=BVI2075_480002 NZ_CAJZAL010000150.1 Protein Homology CDS 187 1977 . - 0 ID=cds-WP_011879790.1;Parent=gene-LDO38_RS18405;Dbxref=GenBank:WP_011879790.1;Name=WP_011879790.1;Ontology_term=GO:0006631,GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904408.1;locus_tag=LDO38_RS18405;product=acyl-CoA dehydrogenase;protein_id=WP_011879790.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 2615 4216 . + . ID=gene-LDO38_RS18410;Name=LDO38_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18410;old_locus_tag=BVI2075_480004 NZ_CAJZAL010000150.1 Protein Homology CDS 2615 4216 . + 0 ID=cds-WP_060122051.1;Parent=gene-LDO38_RS18410;Dbxref=GenBank:WP_060122051.1;Name=WP_060122051.1;Ontology_term=GO:1902600;gbkey=CDS;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012371936.1;locus_tag=LDO38_RS18410;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_060122051.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 4230 5642 . + . ID=gene-LDO38_RS18415;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=LDO38_RS18415;old_locus_tag=BVI2075_480005 NZ_CAJZAL010000150.1 Protein Homology CDS 4230 5642 . + 0 ID=cds-WP_014725601.1;Parent=gene-LDO38_RS18415;Dbxref=GenBank:WP_014725601.1;Name=WP_014725601.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725601.1;locus_tag=LDO38_RS18415;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_014725601.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 5835 6881 . - . ID=gene-LDO38_RS18420;Name=LDO38_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18420;old_locus_tag=BVI2075_480006 NZ_CAJZAL010000150.1 Protein Homology CDS 5835 6881 . - 0 ID=cds-WP_041494422.1;Parent=gene-LDO38_RS18420;Dbxref=GenBank:WP_041494422.1;Name=WP_041494422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879787.1;locus_tag=LDO38_RS18420;product=AraC family transcriptional regulator;protein_id=WP_041494422.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 7031 8665 . - . ID=gene-LDO38_RS18425;Name=LDO38_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18425;old_locus_tag=BVI2075_480007 NZ_CAJZAL010000150.1 Protein Homology CDS 7031 8665 . - 0 ID=cds-WP_181709613.1;Parent=gene-LDO38_RS18425;Dbxref=GenBank:WP_181709613.1;Name=WP_181709613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725598.1;locus_tag=LDO38_RS18425;product=AMP-binding protein;protein_id=WP_181709613.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 8977 10077 . + . ID=gene-LDO38_RS18430;Name=LDO38_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18430;old_locus_tag=BVI2075_480008 NZ_CAJZAL010000150.1 Protein Homology CDS 8977 10077 . + 0 ID=cds-WP_034194374.1;Parent=gene-LDO38_RS18430;Dbxref=GenBank:WP_034194374.1;Name=WP_034194374.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545752.1;locus_tag=LDO38_RS18430;product=AraC family transcriptional regulator;protein_id=WP_034194374.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 10115 11608 . - . ID=gene-LDO38_RS18435;Name=LDO38_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18435;old_locus_tag=BVI2075_480009 NZ_CAJZAL010000150.1 Protein Homology CDS 10115 11608 . - 0 ID=cds-WP_046423183.1;Parent=gene-LDO38_RS18435;Dbxref=GenBank:WP_046423183.1;Name=WP_046423183.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337235.1;locus_tag=LDO38_RS18435;product=sensor histidine kinase;protein_id=WP_046423183.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 11608 12327 . - . ID=gene-LDO38_RS18440;Name=LDO38_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18440;old_locus_tag=BVI2075_480010 NZ_CAJZAL010000150.1 Protein Homology CDS 11608 12327 . - 0 ID=cds-WP_059561984.1;Parent=gene-LDO38_RS18440;Dbxref=GenBank:WP_059561984.1;Name=WP_059561984.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725594.1;locus_tag=LDO38_RS18440;product=response regulator transcription factor;protein_id=WP_059561984.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 12619 13107 . + . ID=gene-LDO38_RS18445;Name=LDO38_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18445 NZ_CAJZAL010000150.1 Protein Homology CDS 12619 13107 . + 0 ID=cds-WP_224056551.1;Parent=gene-LDO38_RS18445;Dbxref=GenBank:WP_224056551.1;Name=WP_224056551.1;Ontology_term=GO:0031992,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=energy transducer activity|0031992||IEA;inference=COORDINATES: protein motif:HMM:TIGR01352.1;locus_tag=LDO38_RS18445;product=energy transducer TonB family protein;protein_id=WP_224056551.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 13520 14557 . - . ID=gene-LDO38_RS18450;Name=LDO38_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18450;old_locus_tag=BVI2075_480013 NZ_CAJZAL010000150.1 Protein Homology CDS 13520 14557 . - 0 ID=cds-WP_059696562.1;Parent=gene-LDO38_RS18450;Dbxref=GenBank:WP_059696562.1;Name=WP_059696562.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879779.1;locus_tag=LDO38_RS18450;product=AraC family transcriptional regulator;protein_id=WP_059696562.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 14630 15166 . + . ID=gene-LDO38_RS18455;Name=LDO38_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18455;old_locus_tag=BVI2075_480014 NZ_CAJZAL010000150.1 Protein Homology CDS 14630 15166 . + 0 ID=cds-WP_014725591.1;Parent=gene-LDO38_RS18455;Dbxref=GenBank:WP_014725591.1;Name=WP_014725591.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725591.1;locus_tag=LDO38_RS18455;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_014725591.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 15527 16144 . - . ID=gene-LDO38_RS18460;Name=LDO38_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18460;old_locus_tag=BVI2075_480015 NZ_CAJZAL010000150.1 Protein Homology CDS 15527 16144 . - 0 ID=cds-WP_224056552.1;Parent=gene-LDO38_RS18460;Dbxref=GenBank:WP_224056552.1;Name=WP_224056552.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879777.1;locus_tag=LDO38_RS18460;product=PqiC family protein;protein_id=WP_224056552.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 16141 17436 . - . ID=gene-LDO38_RS18465;Name=LDO38_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18465;old_locus_tag=BVI2075_480016 NZ_CAJZAL010000150.1 Protein Homology CDS 16141 17436 . - 0 ID=cds-WP_059462005.1;Parent=gene-LDO38_RS18465;Dbxref=GenBank:WP_059462005.1;Name=WP_059462005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725589.1;locus_tag=LDO38_RS18465;product=MlaD family protein;protein_id=WP_059462005.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq pseudogene 17433 18598 . - . ID=gene-LDO38_RS30200;Name=LDO38_RS30200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30200;pseudo=true NZ_CAJZAL010000150.1 Protein Homology CDS 17433 18598 . - 0 ID=cds-LDO38_RS30200;Parent=gene-LDO38_RS30200;Note=frameshifted;Ontology_term=GO:0006950,GO:0061024,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=response to stress|0006950||IEA,membrane organization|0061024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725588.1;locus_tag=LDO38_RS30200;product=paraquat-inducible protein A;pseudo=true;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 19336 20343 . - . ID=gene-LDO38_RS18480;Name=LDO38_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18480;old_locus_tag=BVI2075_480020 NZ_CAJZAL010000150.1 Protein Homology CDS 19336 20343 . - 0 ID=cds-WP_059561977.1;Parent=gene-LDO38_RS18480;Dbxref=GenBank:WP_059561977.1;Name=WP_059561977.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725587.1;locus_tag=LDO38_RS18480;product=fimbrial protein;protein_id=WP_059561977.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 20733 23366 . - . ID=gene-LDO38_RS18485;Name=LDO38_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18485;old_locus_tag=BVI2075_480021 NZ_CAJZAL010000150.1 Protein Homology CDS 20733 23366 . - 0 ID=cds-WP_224056555.1;Parent=gene-LDO38_RS18485;Dbxref=GenBank:WP_224056555.1;Name=WP_224056555.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725585.1;locus_tag=LDO38_RS18485;product=fimbria/pilus outer membrane usher protein;protein_id=WP_224056555.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 23459 24193 . - . ID=gene-LDO38_RS18490;Name=LDO38_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18490;old_locus_tag=BVI2075_480022 NZ_CAJZAL010000150.1 Protein Homology CDS 23459 24193 . - 0 ID=cds-WP_059561970.1;Parent=gene-LDO38_RS18490;Dbxref=GenBank:WP_059561970.1;Name=WP_059561970.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725584.1;locus_tag=LDO38_RS18490;product=fimbrial biogenesis chaperone;protein_id=WP_059561970.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 24320 24889 . - . ID=gene-LDO38_RS18495;Name=LDO38_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18495;old_locus_tag=BVI2075_480023 NZ_CAJZAL010000150.1 Protein Homology CDS 24320 24889 . - 0 ID=cds-WP_014725583.1;Parent=gene-LDO38_RS18495;Dbxref=GenBank:WP_014725583.1;Name=WP_014725583.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725583.1;locus_tag=LDO38_RS18495;product=fimbrial protein;protein_id=WP_014725583.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 25214 26206 . - . ID=gene-LDO38_RS18500;Name=LDO38_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18500;old_locus_tag=BVI2075_480025 NZ_CAJZAL010000150.1 Protein Homology CDS 25214 26206 . - 0 ID=cds-WP_014725582.1;Parent=gene-LDO38_RS18500;Dbxref=GenBank:WP_014725582.1;Name=WP_014725582.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725582.1;locus_tag=LDO38_RS18500;product=fimbrial protein;protein_id=WP_014725582.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 26557 27399 . - . ID=gene-LDO38_RS18505;Name=LDO38_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18505;old_locus_tag=BVI2075_480026 NZ_CAJZAL010000150.1 Protein Homology CDS 26557 27399 . - 0 ID=cds-WP_224056556.1;Parent=gene-LDO38_RS18505;Dbxref=GenBank:WP_224056556.1;Name=WP_224056556.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879771.1;locus_tag=LDO38_RS18505;product=IclR family transcriptional regulator;protein_id=WP_224056556.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 27499 27825 . - . ID=gene-LDO38_RS18510;Name=LDO38_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18510;old_locus_tag=BVI2075_480028 NZ_CAJZAL010000150.1 Protein Homology CDS 27499 27825 . - 0 ID=cds-WP_014725579.1;Parent=gene-LDO38_RS18510;Dbxref=GenBank:WP_014725579.1;Name=WP_014725579.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725579.1;locus_tag=LDO38_RS18510;product=H-NS histone family protein;protein_id=WP_014725579.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 27827 30487 . - . ID=gene-LDO38_RS18515;Name=LDO38_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18515;old_locus_tag=BVI2075_480029 NZ_CAJZAL010000150.1 Protein Homology CDS 27827 30487 . - 0 ID=cds-WP_224056557.1;Parent=gene-LDO38_RS18515;Dbxref=GenBank:WP_224056557.1;Name=WP_224056557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725578.1;locus_tag=LDO38_RS18515;product=polysaccharide pyruvyl transferase family protein;protein_id=WP_224056557.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 30484 32793 . - . ID=gene-LDO38_RS18520;Name=LDO38_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18520;old_locus_tag=BVI2075_480030 NZ_CAJZAL010000150.1 Protein Homology CDS 30484 32793 . - 0 ID=cds-WP_224056558.1;Parent=gene-LDO38_RS18520;Dbxref=GenBank:WP_224056558.1;Name=WP_224056558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725577.1;locus_tag=LDO38_RS18520;product=DUF4838 domain-containing protein;protein_id=WP_224056558.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 32790 33620 . - . ID=gene-LDO38_RS18525;Name=LDO38_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18525;old_locus_tag=BVI2075_480031 NZ_CAJZAL010000150.1 Protein Homology CDS 32790 33620 . - 0 ID=cds-WP_059696544.1;Parent=gene-LDO38_RS18525;Dbxref=GenBank:WP_059696544.1;Name=WP_059696544.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725576.1;locus_tag=LDO38_RS18525;product=glycosyltransferase family 2 protein;protein_id=WP_059696544.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 33688 34827 . - . ID=gene-LDO38_RS18530;Name=LDO38_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18530;old_locus_tag=BVI2075_480032 NZ_CAJZAL010000150.1 Protein Homology CDS 33688 34827 . - 0 ID=cds-WP_224056559.1;Parent=gene-LDO38_RS18530;Dbxref=GenBank:WP_224056559.1;Name=WP_224056559.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725575.1;locus_tag=LDO38_RS18530;product=glycosyltransferase family 4 protein;protein_id=WP_224056559.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 34831 35667 . - . ID=gene-LDO38_RS18535;Name=LDO38_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18535;old_locus_tag=BVI2075_480033 NZ_CAJZAL010000150.1 Protein Homology CDS 34831 35667 . - 0 ID=cds-WP_059457153.1;Parent=gene-LDO38_RS18535;Dbxref=GenBank:WP_059457153.1;Name=WP_059457153.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725574.1;locus_tag=LDO38_RS18535;product=glycosyltransferase family 2 protein;protein_id=WP_059457153.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 35664 36875 . - . ID=gene-LDO38_RS18540;Name=LDO38_RS18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18540;old_locus_tag=BVI2075_480034 NZ_CAJZAL010000150.1 Protein Homology CDS 35664 36875 . - 0 ID=cds-WP_059462028.1;Parent=gene-LDO38_RS18540;Dbxref=GenBank:WP_059462028.1;Name=WP_059462028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879764.1;locus_tag=LDO38_RS18540;product=hypothetical protein;protein_id=WP_059462028.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 36872 38407 . - . ID=gene-LDO38_RS18545;Name=LDO38_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18545;old_locus_tag=BVI2075_480035 NZ_CAJZAL010000150.1 Protein Homology CDS 36872 38407 . - 0 ID=cds-WP_224056560.1;Parent=gene-LDO38_RS18545;Dbxref=GenBank:WP_224056560.1;Name=WP_224056560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725572.1;locus_tag=LDO38_RS18545;product=oligosaccharide flippase family protein;protein_id=WP_224056560.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 38391 40622 . - . ID=gene-LDO38_RS18550;Name=LDO38_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18550;old_locus_tag=BVI2075_480036 NZ_CAJZAL010000150.1 Protein Homology CDS 38391 40622 . - 0 ID=cds-WP_224056561.1;Parent=gene-LDO38_RS18550;Dbxref=GenBank:WP_224056561.1;Name=WP_224056561.1;Ontology_term=GO:0000271;gbkey=CDS;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725571.1;locus_tag=LDO38_RS18550;product=polysaccharide biosynthesis tyrosine autokinase;protein_id=WP_224056561.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 40699 41892 . - . ID=gene-LDO38_RS18555;Name=LDO38_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18555;old_locus_tag=BVI2075_480037 NZ_CAJZAL010000150.1 Protein Homology CDS 40699 41892 . - 0 ID=cds-WP_224056562.1;Parent=gene-LDO38_RS18555;Dbxref=GenBank:WP_224056562.1;Name=WP_224056562.1;Ontology_term=GO:0015774,GO:0015159,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=polysaccharide transmembrane transporter activity|0015159||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879761.1;locus_tag=LDO38_RS18555;product=polysaccharide biosynthesis/export family protein;protein_id=WP_224056562.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 42011 42403 . - . ID=gene-LDO38_RS18560;Name=LDO38_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18560;old_locus_tag=BVI2075_480038 NZ_CAJZAL010000150.1 Protein Homology CDS 42011 42403 . - 0 ID=cds-WP_224056563.1;Parent=gene-LDO38_RS18560;Dbxref=GenBank:WP_224056563.1;Name=WP_224056563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879760.1;locus_tag=LDO38_RS18560;product=hypothetical protein;protein_id=WP_224056563.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 42403 42855 . - . ID=gene-LDO38_RS18565;Name=LDO38_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18565;old_locus_tag=BVI2075_480039 NZ_CAJZAL010000150.1 Protein Homology CDS 42403 42855 . - 0 ID=cds-WP_011879759.1;Parent=gene-LDO38_RS18565;Dbxref=GenBank:WP_011879759.1;Name=WP_011879759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879759.1;locus_tag=LDO38_RS18565;product=protein-tyrosine-phosphatase;protein_id=WP_011879759.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 42864 44234 . - . ID=gene-LDO38_RS18570;Name=LDO38_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18570;old_locus_tag=BVI2075_480040 NZ_CAJZAL010000150.1 Protein Homology CDS 42864 44234 . - 0 ID=cds-WP_224056564.1;Parent=gene-LDO38_RS18570;Dbxref=GenBank:WP_224056564.1;Name=WP_224056564.1;Ontology_term=GO:0016780;gbkey=CDS;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725567.1;locus_tag=LDO38_RS18570;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_224056564.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 44276 45805 . - . ID=gene-LDO38_RS18575;Name=LDO38_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18575;old_locus_tag=BVI2075_480041 NZ_CAJZAL010000150.1 Protein Homology CDS 44276 45805 . - 0 ID=cds-WP_224056565.1;Parent=gene-LDO38_RS18575;Dbxref=GenBank:WP_224056565.1;Name=WP_224056565.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725566.1;locus_tag=LDO38_RS18575;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_224056565.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 46458 46739 . - . ID=gene-LDO38_RS18580;Name=LDO38_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18580 NZ_CAJZAL010000150.1 GeneMarkS-2+ CDS 46458 46739 . - 0 ID=cds-WP_176043126.1;Parent=gene-LDO38_RS18580;Dbxref=GenBank:WP_176043126.1;Name=WP_176043126.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS18580;product=hypothetical protein;protein_id=WP_176043126.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 46742 47665 . + . ID=gene-LDO38_RS18585;Name=LDO38_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18585;old_locus_tag=BVI2075_480043 NZ_CAJZAL010000150.1 Protein Homology CDS 46742 47665 . + 0 ID=cds-WP_011879756.1;Parent=gene-LDO38_RS18585;Dbxref=GenBank:WP_011879756.1;Name=WP_011879756.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879756.1;locus_tag=LDO38_RS18585;product=LysR family transcriptional regulator;protein_id=WP_011879756.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 47763 49169 . + . ID=gene-LDO38_RS18590;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=LDO38_RS18590;old_locus_tag=BVI2075_480044 NZ_CAJZAL010000150.1 Protein Homology CDS 47763 49169 . + 0 ID=cds-WP_059602474.1;Parent=gene-LDO38_RS18590;Dbxref=GenBank:WP_059602474.1;Name=WP_059602474.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011616411.1;locus_tag=LDO38_RS18590;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=WP_059602474.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 49156 50373 . + . ID=gene-LDO38_RS18595;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=LDO38_RS18595;old_locus_tag=BVI2075_480045 NZ_CAJZAL010000150.1 Protein Homology CDS 49156 50373 . + 0 ID=cds-WP_276522969.1;Parent=gene-LDO38_RS18595;Dbxref=GenBank:WP_276522969.1;Name=WP_276522969.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498142.1;locus_tag=LDO38_RS18595;product=tricarballylate utilization 4Fe-4S protein TcuB;protein_id=WP_276522969.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 50439 51755 . + . ID=gene-LDO38_RS18600;Name=LDO38_RS18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18600;old_locus_tag=BVI2075_480046 NZ_CAJZAL010000150.1 Protein Homology CDS 50439 51755 . + 0 ID=cds-WP_014725561.1;Parent=gene-LDO38_RS18600;Dbxref=GenBank:WP_014725561.1;Name=WP_014725561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498141.1;locus_tag=LDO38_RS18600;product=MFS transporter;protein_id=WP_014725561.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 51825 53171 . - . ID=gene-LDO38_RS18605;Name=LDO38_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18605;old_locus_tag=BVI2075_480047 NZ_CAJZAL010000150.1 Protein Homology CDS 51825 53171 . - 0 ID=cds-WP_011879752.1;Parent=gene-LDO38_RS18605;Dbxref=GenBank:WP_011879752.1;Name=WP_011879752.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879752.1;locus_tag=LDO38_RS18605;product=MFS transporter;protein_id=WP_011879752.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 53470 54507 . + . ID=gene-LDO38_RS18610;Name=LDO38_RS18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18610;old_locus_tag=BVI2075_480049 NZ_CAJZAL010000150.1 Protein Homology CDS 53470 54507 . + 0 ID=cds-WP_043292734.1;Parent=gene-LDO38_RS18610;Dbxref=GenBank:WP_043292734.1;Name=WP_043292734.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336821.1;locus_tag=LDO38_RS18610;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_043292734.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 54761 56542 . + . ID=gene-LDO38_RS18615;Name=LDO38_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18615;old_locus_tag=BVI2075_480051 NZ_CAJZAL010000150.1 Protein Homology CDS 54761 56542 . + 0 ID=cds-WP_011879750.1;Parent=gene-LDO38_RS18615;Dbxref=GenBank:WP_011879750.1;Name=WP_011879750.1;Ontology_term=GO:0016836,GO:0051536;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217270.1;locus_tag=LDO38_RS18615;product=IlvD/Edd family dehydratase;protein_id=WP_011879750.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 56575 57765 . + . ID=gene-LDO38_RS18620;Name=LDO38_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18620;old_locus_tag=BVI2075_480050 NZ_CAJZAL010000150.1 Protein Homology CDS 56575 57765 . + 0 ID=cds-WP_224056566.1;Parent=gene-LDO38_RS18620;Dbxref=GenBank:WP_224056566.1;Name=WP_224056566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483290.1;locus_tag=LDO38_RS18620;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_224056566.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 57796 59109 . - . ID=gene-LDO38_RS18625;Name=LDO38_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18625;old_locus_tag=BVI2075_480052 NZ_CAJZAL010000150.1 Protein Homology CDS 57796 59109 . - 0 ID=cds-WP_046423206.1;Parent=gene-LDO38_RS18625;Dbxref=GenBank:WP_046423206.1;Name=WP_046423206.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549870.1;locus_tag=LDO38_RS18625;product=MFS transporter;protein_id=WP_046423206.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 59940 60905 . + . ID=gene-LDO38_RS18630;Name=LDO38_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18630;old_locus_tag=BVI2075_480053 NZ_CAJZAL010000150.1 Protein Homology CDS 59940 60905 . + 0 ID=cds-WP_224056567.1;Parent=gene-LDO38_RS18630;Dbxref=GenBank:WP_224056567.1;Name=WP_224056567.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725556.1;locus_tag=LDO38_RS18630;product=helix-turn-helix domain-containing protein;protein_id=WP_224056567.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 61198 62637 . + . ID=gene-LDO38_RS18635;Name=LDO38_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18635;old_locus_tag=BVI2075_480055 NZ_CAJZAL010000150.1 Protein Homology CDS 61198 62637 . + 0 ID=cds-WP_046423209.1;Parent=gene-LDO38_RS18635;Dbxref=GenBank:WP_046423209.1;Name=WP_046423209.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549872.1;locus_tag=LDO38_RS18635;product=APC family permease;protein_id=WP_046423209.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 62907 64352 . + . ID=gene-LDO38_RS18640;Name=LDO38_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18640;old_locus_tag=BVI2075_480056 NZ_CAJZAL010000150.1 Protein Homology CDS 62907 64352 . + 0 ID=cds-WP_059717990.1;Parent=gene-LDO38_RS18640;Dbxref=GenBank:WP_059717990.1;Name=WP_059717990.1;Ontology_term=GO:0004030;gbkey=CDS;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725554.1;locus_tag=LDO38_RS18640;product=aldehyde dehydrogenase family protein;protein_id=WP_059717990.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 64408 65772 . + . ID=gene-LDO38_RS18645;Name=LDO38_RS18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18645;old_locus_tag=BVI2075_480057 NZ_CAJZAL010000150.1 Protein Homology CDS 64408 65772 . + 0 ID=cds-WP_176322098.1;Parent=gene-LDO38_RS18645;Dbxref=GenBank:WP_176322098.1;Name=WP_176322098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549874.1;locus_tag=LDO38_RS18645;product=aspartate aminotransferase family protein;protein_id=WP_176322098.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 65937 66500 . + . ID=gene-LDO38_RS18650;Name=LDO38_RS18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18650;old_locus_tag=BVI2075_480058 NZ_CAJZAL010000150.1 Protein Homology CDS 65937 66500 . + 0 ID=cds-WP_014725553.1;Parent=gene-LDO38_RS18650;Dbxref=GenBank:WP_014725553.1;Name=WP_014725553.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732971.1;locus_tag=LDO38_RS18650;product=cytochrome b;protein_id=WP_014725553.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 66687 67844 . + . ID=gene-LDO38_RS18655;Name=LDO38_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18655;old_locus_tag=BVI2075_480059 NZ_CAJZAL010000150.1 Protein Homology CDS 66687 67844 . + 0 ID=cds-WP_224056568.1;Parent=gene-LDO38_RS18655;Dbxref=GenBank:WP_224056568.1;Name=WP_224056568.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879742.1;locus_tag=LDO38_RS18655;product=porin;protein_id=WP_224056568.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 67905 68960 . - . ID=gene-LDO38_RS18660;Name=LDO38_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18660;old_locus_tag=BVI2075_480060 NZ_CAJZAL010000150.1 Protein Homology CDS 67905 68960 . - 0 ID=cds-WP_014725551.1;Parent=gene-LDO38_RS18660;Dbxref=GenBank:WP_014725551.1;Name=WP_014725551.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725551.1;locus_tag=LDO38_RS18660;product=porin;protein_id=WP_014725551.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 69171 69899 . + . ID=gene-LDO38_RS18665;Name=LDO38_RS18665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18665;old_locus_tag=BVI2075_480061 NZ_CAJZAL010000150.1 Protein Homology CDS 69171 69899 . + 0 ID=cds-WP_011879740.1;Parent=gene-LDO38_RS18665;Dbxref=GenBank:WP_011879740.1;Name=WP_011879740.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732970.1;locus_tag=LDO38_RS18665;product=IclR family transcriptional regulator;protein_id=WP_011879740.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 69943 71394 . - . ID=gene-LDO38_RS18670;Name=LDO38_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18670;old_locus_tag=BVI2075_480062 NZ_CAJZAL010000150.1 Protein Homology CDS 69943 71394 . - 0 ID=cds-WP_212173192.1;Parent=gene-LDO38_RS18670;Dbxref=GenBank:WP_212173192.1;Name=WP_212173192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879739.1;locus_tag=LDO38_RS18670;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_212173192.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 71501 71833 . - . ID=gene-LDO38_RS18675;Name=LDO38_RS18675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18675;old_locus_tag=BVI2075_480063 NZ_CAJZAL010000150.1 Protein Homology CDS 71501 71833 . - 0 ID=cds-WP_011879738.1;Parent=gene-LDO38_RS18675;Dbxref=GenBank:WP_011879738.1;Name=WP_011879738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879738.1;locus_tag=LDO38_RS18675;product=NIPSNAP family protein;protein_id=WP_011879738.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 71823 73463 . - . ID=gene-LDO38_RS18680;Name=LDO38_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18680;old_locus_tag=BVI2075_480064 NZ_CAJZAL010000150.1 Protein Homology CDS 71823 73463 . - 0 ID=cds-WP_059463306.1;Parent=gene-LDO38_RS18680;Dbxref=GenBank:WP_059463306.1;Name=WP_059463306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549881.1;locus_tag=LDO38_RS18680;product=bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;protein_id=WP_059463306.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 73460 74347 . - . ID=gene-LDO38_RS18685;Name=LDO38_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18685;old_locus_tag=BVI2075_480065 NZ_CAJZAL010000150.1 Protein Homology CDS 73460 74347 . - 0 ID=cds-WP_014725546.1;Parent=gene-LDO38_RS18685;Dbxref=GenBank:WP_014725546.1;Name=WP_014725546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725546.1;locus_tag=LDO38_RS18685;product=alpha/beta fold hydrolase;protein_id=WP_014725546.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 74375 74980 . - . ID=gene-LDO38_RS18690;Name=LDO38_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18690;old_locus_tag=BVI2075_480066 NZ_CAJZAL010000150.1 Protein Homology CDS 74375 74980 . - 0 ID=cds-WP_011879735.1;Parent=gene-LDO38_RS18690;Dbxref=GenBank:WP_011879735.1;Name=WP_011879735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697510.1;locus_tag=LDO38_RS18690;product=amino acid synthesis family protein;protein_id=WP_011879735.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 75041 75556 . - . ID=gene-LDO38_RS18695;Name=LDO38_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18695;old_locus_tag=BVI2075_480067 NZ_CAJZAL010000150.1 Protein Homology CDS 75041 75556 . - 0 ID=cds-WP_014725545.1;Parent=gene-LDO38_RS18695;Dbxref=GenBank:WP_014725545.1;Name=WP_014725545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732964.1;locus_tag=LDO38_RS18695;product=VOC family protein;protein_id=WP_014725545.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 75569 76606 . - . ID=gene-LDO38_RS18700;Name=LDO38_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18700;old_locus_tag=BVI2075_480068 NZ_CAJZAL010000150.1 Protein Homology CDS 75569 76606 . - 0 ID=cds-WP_014725544.1;Parent=gene-LDO38_RS18700;Dbxref=GenBank:WP_014725544.1;Name=WP_014725544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732963.1;locus_tag=LDO38_RS18700;product=sialidase family protein;protein_id=WP_014725544.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 76640 77452 . - . ID=gene-LDO38_RS18705;Name=LDO38_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18705;old_locus_tag=BVI2075_480069 NZ_CAJZAL010000150.1 Protein Homology CDS 76640 77452 . - 0 ID=cds-WP_011879732.1;Parent=gene-LDO38_RS18705;Dbxref=GenBank:WP_011879732.1;Name=WP_011879732.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017775041.1;locus_tag=LDO38_RS18705;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_011879732.1;transl_table=11 NZ_CAJZAL010000150.1 RefSeq gene 77501 78018 . - . ID=gene-LDO38_RS18710;Name=LDO38_RS18710;end_range=78018,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18710;old_locus_tag=BVI2075_480070;partial=true NZ_CAJZAL010000150.1 Protein Homology CDS 77501 78018 . - 2 ID=cds-WP_253074558.1;Parent=gene-LDO38_RS18710;Dbxref=GenBank:WP_253074558.1;Name=WP_253074558.1;Ontology_term=GO:0003824,GO:0030976;end_range=78018,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732961.1;locus_tag=LDO38_RS18710;partial=true;product=thiamine pyrophosphate-dependent enzyme;protein_id=WP_253074558.1;transl_table=11 ##sequence-region NZ_CAJZAL010000151.1 1 31830 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000151.1 RefSeq region 1 31830 . + . ID=NZ_CAJZAL010000151.1:1..31830;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_49 NZ_CAJZAL010000151.1 RefSeq gene 1 645 . - . ID=gene-LDO38_RS18715;Name=LDO38_RS18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18715;partial=true;start_range=.,1 NZ_CAJZAL010000151.1 Protein Homology CDS 1 645 . - 0 ID=cds-WP_224056571.1;Parent=gene-LDO38_RS18715;Dbxref=GenBank:WP_224056571.1;Name=WP_224056571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011850994.1;locus_tag=LDO38_RS18715;partial=true;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_224056571.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 783 1775 . - . ID=gene-LDO38_RS18720;Name=LDO38_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18720;old_locus_tag=BVI2075_490002 NZ_CAJZAL010000151.1 Protein Homology CDS 783 1775 . - 0 ID=cds-WP_014723739.1;Parent=gene-LDO38_RS18720;Dbxref=GenBank:WP_014723739.1;Name=WP_014723739.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189282.1;locus_tag=LDO38_RS18720;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_014723739.1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 1901 2776 . + . ID=gene-LDO38_RS18725;Name=LDO38_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18725;old_locus_tag=BVI2075_490003 NZ_CAJZAL010000151.1 Protein Homology CDS 1901 2776 . + 0 ID=cds-WP_059558673.1;Parent=gene-LDO38_RS18725;Dbxref=GenBank:WP_059558673.1;Name=WP_059558673.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212625.1;locus_tag=LDO38_RS18725;product=IclR family transcriptional regulator;protein_id=WP_059558673.1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 2894 4210 . + . ID=gene-LDO38_RS18730;Name=LDO38_RS18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18730;old_locus_tag=BVI2075_490004 NZ_CAJZAL010000151.1 Protein Homology CDS 2894 4210 . + 0 ID=cds-WP_175898325.1;Parent=gene-LDO38_RS18730;Dbxref=GenBank:WP_175898325.1;Name=WP_175898325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886163.1;locus_tag=LDO38_RS18730;product=DUF3108 domain-containing protein;protein_id=WP_175898325.1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 4456 4713 . + . ID=gene-LDO38_RS18735;Name=LDO38_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18735;old_locus_tag=BVI2075_490006 NZ_CAJZAL010000151.1 Protein Homology CDS 4456 4713 . + 0 ID=cds-WP_006477667.1;Parent=gene-LDO38_RS18735;Dbxref=GenBank:WP_006477667.1;Name=WP_006477667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398119.1;locus_tag=LDO38_RS18735;product=BTH_I0359 family protein;protein_id=WP_006477667.1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 4939 6006 . + . ID=gene-LDO38_RS18740;Name=LDO38_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18740;old_locus_tag=BVI2075_490007 NZ_CAJZAL010000151.1 Protein Homology CDS 4939 6006 . + 0 ID=cds-WP_014723742.1;Parent=gene-LDO38_RS18740;Dbxref=GenBank:WP_014723742.1;Name=WP_014723742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658053.1;locus_tag=LDO38_RS18740;product=homocysteine S-methyltransferase family protein;protein_id=WP_014723742.1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 6053 8770 . + . ID=gene-LDO38_RS18745;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=LDO38_RS18745;old_locus_tag=BVI2075_490008 NZ_CAJZAL010000151.1 Protein Homology CDS 6053 8770 . + 0 ID=cds-WP_011886165.1;Parent=gene-LDO38_RS18745;Dbxref=GenBank:WP_011886165.1;Name=WP_011886165.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009918375.1;locus_tag=LDO38_RS18745;product=methionine synthase;protein_id=WP_011886165.1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 8916 9239 . - . ID=gene-LDO38_RS18750;Name=LDO38_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18750;old_locus_tag=BVI2075_490009 NZ_CAJZAL010000151.1 Protein Homology CDS 8916 9239 . - 0 ID=cds-WP_011886166.1;Parent=gene-LDO38_RS18750;Dbxref=GenBank:WP_011886166.1;Name=WP_011886166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334383.1;locus_tag=LDO38_RS18750;product=DUF1840 domain-containing protein;protein_id=WP_011886166.1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 9441 11222 . + . ID=gene-LDO38_RS18755;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=LDO38_RS18755;old_locus_tag=BVI2075_490011 NZ_CAJZAL010000151.1 Protein Homology CDS 9441 11222 . + 0 ID=cds-WP_014723744.1;Parent=gene-LDO38_RS18755;Dbxref=GenBank:WP_014723744.1;Name=WP_014723744.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522947.1;locus_tag=LDO38_RS18755;product=arginine--tRNA ligase;protein_id=WP_014723744.1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 11322 12227 . + . ID=gene-LDO38_RS18760;Name=LDO38_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18760;old_locus_tag=BVI2075_490012 NZ_CAJZAL010000151.1 Protein Homology CDS 11322 12227 . + 0 ID=cds-WP_045578737.1;Parent=gene-LDO38_RS18760;Dbxref=GenBank:WP_045578737.1;Name=WP_045578737.1;Ontology_term=GO:0042834,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750888.1;locus_tag=LDO38_RS18760;product=SPOR domain-containing protein;protein_id=WP_045578737.1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 12294 12932 . + . ID=gene-LDO38_RS18765;Name=LDO38_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18765;old_locus_tag=BVI2075_490013 NZ_CAJZAL010000151.1 Protein Homology CDS 12294 12932 . + 0 ID=cds-WP_011886169.1;Parent=gene-LDO38_RS18765;Dbxref=GenBank:WP_011886169.1;Name=WP_011886169.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190112.1;locus_tag=LDO38_RS18765;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_011886169.1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 12952 13725 . + . ID=gene-LDO38_RS18770;Name=LDO38_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18770;old_locus_tag=BVI2075_490014 NZ_CAJZAL010000151.1 Protein Homology CDS 12952 13725 . + 0 ID=cds-WP_011886170.1;Parent=gene-LDO38_RS18770;Dbxref=GenBank:WP_011886170.1;Name=WP_011886170.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886170.1;locus_tag=LDO38_RS18770;product=SDR family oxidoreductase;protein_id=WP_011886170.1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 14464 16059 . + . ID=gene-LDO38_RS18775;Name=LDO38_RS18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18775;old_locus_tag=BVI2075_490015 NZ_CAJZAL010000151.1 Protein Homology CDS 14464 16059 . + 0 ID=cds-WP_011886171.1;Parent=gene-LDO38_RS18775;Dbxref=GenBank:WP_011886171.1;Name=WP_011886171.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895890.1;locus_tag=LDO38_RS18775;product=ABC transporter substrate-binding protein;protein_id=WP_011886171.1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 16182 16370 . + . ID=gene-LDO38_RS18780;Name=LDO38_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18780;old_locus_tag=BVI2075_490016 NZ_CAJZAL010000151.1 GeneMarkS-2+ CDS 16182 16370 . + 0 ID=cds-WP_059475390.1;Parent=gene-LDO38_RS18780;Dbxref=GenBank:WP_059475390.1;Name=WP_059475390.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS18780;product=hypothetical protein;protein_id=WP_059475390.1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 16388 17467 . - . ID=gene-LDO38_RS18785;Name=LDO38_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18785;old_locus_tag=BVI2075_490017 NZ_CAJZAL010000151.1 Protein Homology CDS 16388 17467 . - 0 ID=cds-WP_046429155.1;Parent=gene-LDO38_RS18785;Dbxref=GenBank:WP_046429155.1;Name=WP_046429155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407098.1;locus_tag=LDO38_RS18785;product=MBL fold metallo-hydrolase;protein_id=WP_046429155.1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 17889 19709 . + . ID=gene-LDO38_RS18790;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=LDO38_RS18790;old_locus_tag=BVI2075_490018 NZ_CAJZAL010000151.1 Protein Homology CDS 17889 19709 . + 0 ID=cds-WP_059461190.1;Parent=gene-LDO38_RS18790;Dbxref=GenBank:WP_059461190.1;Name=WP_059461190.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407100.1;locus_tag=LDO38_RS18790;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_059461190.1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 19776 20543 . + . ID=gene-LDO38_RS18795;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=LDO38_RS18795;old_locus_tag=BVI2075_490019 NZ_CAJZAL010000151.1 Protein Homology CDS 19776 20543 . + 0 ID=cds-WP_059668237.1;Parent=gene-LDO38_RS18795;Dbxref=GenBank:WP_059668237.1;Name=WP_059668237.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493618.1;locus_tag=LDO38_RS18795;product=carbonate dehydratase;protein_id=WP_059668237.1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 20620 21297 . + . ID=gene-LDO38_RS18800;Name=LDO38_RS18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18800;old_locus_tag=BVI2075_490020 NZ_CAJZAL010000151.1 Protein Homology CDS 20620 21297 . + 0 ID=cds-WP_011886176.1;Parent=gene-LDO38_RS18800;Dbxref=GenBank:WP_011886176.1;Name=WP_011886176.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895885.1;locus_tag=LDO38_RS18800;product=SDR family oxidoreductase;protein_id=WP_011886176.1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 21337 21774 . + . ID=gene-LDO38_RS18805;Name=LDO38_RS18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18805;old_locus_tag=BVI2075_490021 NZ_CAJZAL010000151.1 Protein Homology CDS 21337 21774 . + 0 ID=cds-WP_011886177.1;Parent=gene-LDO38_RS18805;Dbxref=GenBank:WP_011886177.1;Name=WP_011886177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495438.1;locus_tag=LDO38_RS18805;product=YchJ family protein;protein_id=WP_011886177.1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 21882 23159 . + . ID=gene-LDO38_RS18810;Name=LDO38_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18810;old_locus_tag=BVI2075_490022 NZ_CAJZAL010000151.1 Protein Homology CDS 21882 23159 . + 0 ID=cds-WP_059668236.1;Parent=gene-LDO38_RS18810;Dbxref=GenBank:WP_059668236.1;Name=WP_059668236.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477650.1;locus_tag=LDO38_RS18810;product=dienelactone hydrolase family protein;protein_id=WP_059668236.1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 23558 24904 . + . ID=gene-LDO38_RS18815;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=LDO38_RS18815;old_locus_tag=BVI2075_490023 NZ_CAJZAL010000151.1 Protein Homology CDS 23558 24904 . + 0 ID=cds-WP_059463389.1;Parent=gene-LDO38_RS18815;Dbxref=GenBank:WP_059463389.1;Name=WP_059463389.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090506.1;locus_tag=LDO38_RS18815;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_059463389.1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 24901 26112 . + . ID=gene-LDO38_RS18820;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=LDO38_RS18820;old_locus_tag=BVI2075_490024 NZ_CAJZAL010000151.1 Protein Homology CDS 24901 26112 . + 0 ID=cds-WP_224056572.1;Parent=gene-LDO38_RS18820;Dbxref=GenBank:WP_224056572.1;Name=WP_224056572.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886180.1;locus_tag=LDO38_RS18820;product=8-amino-7-oxononanoate synthase;protein_id=WP_224056572.1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 26109 26828 . + . ID=gene-LDO38_RS18825;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=LDO38_RS18825;old_locus_tag=BVI2075_490025 NZ_CAJZAL010000151.1 Protein Homology CDS 26109 26828 . + 0 ID=cds-WP_011886181.1;Parent=gene-LDO38_RS18825;Dbxref=GenBank:WP_011886181.1;Name=WP_011886181.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886181.1;locus_tag=LDO38_RS18825;product=dethiobiotin synthase;protein_id=WP_011886181.1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 26873 27892 . + . ID=gene-LDO38_RS18830;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=LDO38_RS18830;old_locus_tag=BVI2075_490026 NZ_CAJZAL010000151.1 Protein Homology CDS 26873 27892 . + 0 ID=cds-WP_011886182.1;Parent=gene-LDO38_RS18830;Dbxref=GenBank:WP_011886182.1;Name=WP_011886182.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886182.1;locus_tag=LDO38_RS18830;product=biotin synthase BioB;protein_id=WP_011886182.1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 28130 28855 . - . ID=gene-LDO38_RS18835;Name=LDO38_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18835;old_locus_tag=BVI2075_490027 NZ_CAJZAL010000151.1 Protein Homology CDS 28130 28855 . - 0 ID=cds-WP_011886183.1;Parent=gene-LDO38_RS18835;Dbxref=GenBank:WP_011886183.1;Name=WP_011886183.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546341.1;locus_tag=LDO38_RS18835;product=copper homeostasis protein CutC;protein_id=WP_011886183.1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 29015 30301 . - . ID=gene-LDO38_RS18840;Name=LDO38_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18840;old_locus_tag=BVI2075_490028 NZ_CAJZAL010000151.1 Protein Homology CDS 29015 30301 . - 0 ID=cds-WP_011886184.1;Parent=gene-LDO38_RS18840;Dbxref=GenBank:WP_011886184.1;Name=WP_011886184.1;Ontology_term=GO:0007165,GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895877.1;locus_tag=LDO38_RS18840;product=sensor domain-containing phosphodiesterase;protein_id=WP_011886184.1;transl_table=11 NZ_CAJZAL010000151.1 RefSeq gene 30591 31830 . + . ID=gene-LDO38_RS18845;Name=LDO38_RS18845;end_range=31830,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18845;partial=true NZ_CAJZAL010000151.1 Protein Homology CDS 30591 31830 . + 0 ID=cds-WP_224056573.1;Parent=gene-LDO38_RS18845;Dbxref=GenBank:WP_224056573.1;Name=WP_224056573.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;end_range=31830,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414312.1;locus_tag=LDO38_RS18845;partial=true;product=Na+/H+ antiporter;protein_id=WP_224056573.1;transl_table=11 ##sequence-region NZ_CAJZAL010000152.1 1 67452 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000152.1 RefSeq region 1 67452 . + . ID=NZ_CAJZAL010000152.1:1..67452;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_5 NZ_CAJZAL010000152.1 RefSeq gene 1 1067 . - . ID=gene-LDO38_RS18850;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=LDO38_RS18850;partial=true;start_range=.,1 NZ_CAJZAL010000152.1 Protein Homology CDS 1 1067 . - 0 ID=cds-WP_224056574.1;Parent=gene-LDO38_RS18850;Dbxref=GenBank:WP_224056574.1;Name=WP_224056574.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351692.1;locus_tag=LDO38_RS18850;partial=true;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_224056574.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 1071 3419 . - . ID=gene-LDO38_RS18855;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=LDO38_RS18855;old_locus_tag=BVI2075_50002 NZ_CAJZAL010000152.1 Protein Homology CDS 1071 3419 . - 0 ID=cds-WP_045579245.1;Parent=gene-LDO38_RS18855;Dbxref=GenBank:WP_045579245.1;Name=WP_045579245.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545161.1;locus_tag=LDO38_RS18855;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_045579245.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 4040 4501 . - . ID=gene-LDO38_RS18860;Name=LDO38_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18860;old_locus_tag=BVI2075_50004 NZ_CAJZAL010000152.1 Protein Homology CDS 4040 4501 . - 0 ID=cds-WP_011884377.1;Parent=gene-LDO38_RS18860;Dbxref=GenBank:WP_011884377.1;Name=WP_011884377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722838.1;locus_tag=LDO38_RS18860;product=hypothetical protein;protein_id=WP_011884377.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 4498 5895 . - . ID=gene-LDO38_RS18865;Name=LDO38_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18865;old_locus_tag=BVI2075_50005 NZ_CAJZAL010000152.1 Protein Homology CDS 4498 5895 . - 0 ID=cds-WP_069246207.1;Parent=gene-LDO38_RS18865;Dbxref=GenBank:WP_069246207.1;Name=WP_069246207.1;Ontology_term=GO:0016311,GO:0008138;gbkey=CDS;go_function=protein tyrosine/serine/threonine phosphatase activity|0008138||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722837.1;locus_tag=LDO38_RS18865;product=phosphatase PAP2 family protein;protein_id=WP_069246207.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 5892 7661 . - . ID=gene-LDO38_RS18870;Name=LDO38_RS18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18870;old_locus_tag=BVI2075_50006 NZ_CAJZAL010000152.1 Protein Homology CDS 5892 7661 . - 0 ID=cds-WP_069246206.1;Parent=gene-LDO38_RS18870;Dbxref=GenBank:WP_069246206.1;Name=WP_069246206.1;Ontology_term=GO:0008168,GO:0016787,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,hydrolase activity|0016787||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884372.1;locus_tag=LDO38_RS18870;product=bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase;protein_id=WP_069246206.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 7752 8357 . - . ID=gene-LDO38_RS18875;Name=LDO38_RS18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18875;old_locus_tag=BVI2075_50007 NZ_CAJZAL010000152.1 Protein Homology CDS 7752 8357 . - 0 ID=cds-WP_011884371.1;Parent=gene-LDO38_RS18875;Dbxref=GenBank:WP_011884371.1;Name=WP_011884371.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332730.1;locus_tag=LDO38_RS18875;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_011884371.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 8437 8817 . - . ID=gene-LDO38_RS18880;Name=LDO38_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18880 NZ_CAJZAL010000152.1 GeneMarkS-2+ CDS 8437 8817 . - 0 ID=cds-WP_155625344.1;Parent=gene-LDO38_RS18880;Dbxref=GenBank:WP_155625344.1;Name=WP_155625344.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS18880;product=hypothetical protein;protein_id=WP_155625344.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 8810 9442 . + . ID=gene-LDO38_RS18885;Name=LDO38_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18885;old_locus_tag=BVI2075_50008 NZ_CAJZAL010000152.1 Protein Homology CDS 8810 9442 . + 0 ID=cds-WP_011884370.1;Parent=gene-LDO38_RS18885;Dbxref=GenBank:WP_011884370.1;Name=WP_011884370.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481857.1;locus_tag=LDO38_RS18885;product=lysophospholipid acyltransferase family protein;protein_id=WP_011884370.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 9479 10408 . + . ID=gene-LDO38_RS18890;Name=LDO38_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18890;old_locus_tag=BVI2075_50009 NZ_CAJZAL010000152.1 Protein Homology CDS 9479 10408 . + 0 ID=cds-WP_011884369.1;Parent=gene-LDO38_RS18890;Dbxref=GenBank:WP_011884369.1;Name=WP_011884369.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332728.1;locus_tag=LDO38_RS18890;product=phosphatidate cytidylyltransferase;protein_id=WP_011884369.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq pseudogene 10463 11172 . - . ID=gene-LDO38_RS18895;Name=LDO38_RS18895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS18895;pseudo=true NZ_CAJZAL010000152.1 Protein Homology CDS 10463 11172 . - 0 ID=cds-LDO38_RS18895;Parent=gene-LDO38_RS18895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481846.1;locus_tag=LDO38_RS18895;product=topoisomerase IV;pseudo=true;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 11600 12760 . + . ID=gene-LDO38_RS18900;Name=LDO38_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18900;old_locus_tag=BVI2075_50011 NZ_CAJZAL010000152.1 Protein Homology CDS 11600 12760 . + 0 ID=cds-WP_059462903.1;Parent=gene-LDO38_RS18900;Dbxref=GenBank:WP_059462903.1;Name=WP_059462903.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884367.1;locus_tag=LDO38_RS18900;product=porin;protein_id=WP_059462903.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 13095 14294 . + . ID=gene-LDO38_RS18905;Name=LDO38_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18905;old_locus_tag=BVI2075_50012 NZ_CAJZAL010000152.1 Protein Homology CDS 13095 14294 . + 0 ID=cds-WP_014722830.1;Parent=gene-LDO38_RS18905;Dbxref=GenBank:WP_014722830.1;Name=WP_014722830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490616.1;locus_tag=LDO38_RS18905;product=transglycosylase SLT domain-containing protein;protein_id=WP_014722830.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 14341 14676 . - . ID=gene-LDO38_RS18910;Name=LDO38_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18910;old_locus_tag=BVI2075_50014 NZ_CAJZAL010000152.1 Protein Homology CDS 14341 14676 . - 0 ID=cds-WP_011884365.1;Parent=gene-LDO38_RS18910;Dbxref=GenBank:WP_011884365.1;Name=WP_011884365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492516.1;locus_tag=LDO38_RS18910;product=hypothetical protein;protein_id=WP_011884365.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 14770 15516 . - . ID=gene-LDO38_RS18915;Name=LDO38_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18915;old_locus_tag=BVI2075_50016 NZ_CAJZAL010000152.1 Protein Homology CDS 14770 15516 . - 0 ID=cds-WP_043290978.1;Parent=gene-LDO38_RS18915;Dbxref=GenBank:WP_043290978.1;Name=WP_043290978.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897364.1;locus_tag=LDO38_RS18915;product=MipA/OmpV family protein;protein_id=WP_043290978.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 15759 16487 . + . ID=gene-LDO38_RS18920;Name=LDO38_RS18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18920;old_locus_tag=BVI2075_50017 NZ_CAJZAL010000152.1 Protein Homology CDS 15759 16487 . + 0 ID=cds-WP_011884363.1;Parent=gene-LDO38_RS18920;Dbxref=GenBank:WP_011884363.1;Name=WP_011884363.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523775.1;locus_tag=LDO38_RS18920;product=response regulator;protein_id=WP_011884363.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 16488 17771 . + . ID=gene-LDO38_RS18925;Name=LDO38_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18925;old_locus_tag=BVI2075_50018 NZ_CAJZAL010000152.1 Protein Homology CDS 16488 17771 . + 0 ID=cds-WP_059462260.1;Parent=gene-LDO38_RS18925;Dbxref=GenBank:WP_059462260.1;Name=WP_059462260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884362.1;locus_tag=LDO38_RS18925;product=ATP-binding protein;protein_id=WP_059462260.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 17983 18513 . + . ID=gene-LDO38_RS18930;Name=LDO38_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18930;old_locus_tag=BVI2075_50019 NZ_CAJZAL010000152.1 Protein Homology CDS 17983 18513 . + 0 ID=cds-WP_224056575.1;Parent=gene-LDO38_RS18930;Dbxref=GenBank:WP_224056575.1;Name=WP_224056575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884361.1;locus_tag=LDO38_RS18930;product=hypothetical protein;protein_id=WP_224056575.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 18603 19664 . - . ID=gene-LDO38_RS18935;Name=LDO38_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18935;old_locus_tag=BVI2075_50020 NZ_CAJZAL010000152.1 Protein Homology CDS 18603 19664 . - 0 ID=cds-WP_059567945.1;Parent=gene-LDO38_RS18935;Dbxref=GenBank:WP_059567945.1;Name=WP_059567945.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722826.1;locus_tag=LDO38_RS18935;product=helix-turn-helix transcriptional regulator;protein_id=WP_059567945.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 19931 20647 . + . ID=gene-LDO38_RS18940;Name=LDO38_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18940;old_locus_tag=BVI2075_50021 NZ_CAJZAL010000152.1 Protein Homology CDS 19931 20647 . + 0 ID=cds-WP_224056577.1;Parent=gene-LDO38_RS18940;Dbxref=GenBank:WP_224056577.1;Name=WP_224056577.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722825.1;locus_tag=LDO38_RS18940;product=helix-turn-helix domain-containing protein;protein_id=WP_224056577.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 21049 21125 . - . ID=gene-LDO38_RS18945;Name=LDO38_RS18945;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS18945;old_locus_tag=BVI2075_TRNA48 NZ_CAJZAL010000152.1 tRNAscan-SE tRNA 21049 21125 . - . ID=rna-LDO38_RS18945;Parent=gene-LDO38_RS18945;anticodon=(pos:complement(21089..21091));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS18945;product=tRNA-Arg NZ_CAJZAL010000152.1 tRNAscan-SE exon 21049 21125 . - . ID=exon-LDO38_RS18945-1;Parent=rna-LDO38_RS18945;anticodon=(pos:complement(21089..21091));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS18945;product=tRNA-Arg NZ_CAJZAL010000152.1 RefSeq gene 21305 22135 . - . ID=gene-LDO38_RS18950;Name=LDO38_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18950;old_locus_tag=BVI2075_50023 NZ_CAJZAL010000152.1 Protein Homology CDS 21305 22135 . - 0 ID=cds-WP_011884310.1;Parent=gene-LDO38_RS18950;Dbxref=GenBank:WP_011884310.1;Name=WP_011884310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545102.1;locus_tag=LDO38_RS18950;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_011884310.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 22618 23532 . + . ID=gene-LDO38_RS18955;Name=LDO38_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18955;old_locus_tag=BVI2075_50025 NZ_CAJZAL010000152.1 Protein Homology CDS 22618 23532 . + 0 ID=cds-WP_069246204.1;Parent=gene-LDO38_RS18955;Dbxref=GenBank:WP_069246204.1;Name=WP_069246204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545101.1;locus_tag=LDO38_RS18955;product=aldose epimerase;protein_id=WP_069246204.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 23663 24361 . + . ID=gene-LDO38_RS18960;Name=LDO38_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18960;old_locus_tag=BVI2075_50026 NZ_CAJZAL010000152.1 Protein Homology CDS 23663 24361 . + 0 ID=cds-WP_011884308.1;Parent=gene-LDO38_RS18960;Dbxref=GenBank:WP_011884308.1;Name=WP_011884308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417339.1;locus_tag=LDO38_RS18960;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_011884308.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 25211 25534 . + . ID=gene-LDO38_RS18965;Name=LDO38_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18965;old_locus_tag=BVI2075_50030 NZ_CAJZAL010000152.1 Protein Homology CDS 25211 25534 . + 0 ID=cds-WP_034193252.1;Parent=gene-LDO38_RS18965;Dbxref=GenBank:WP_034193252.1;Name=WP_034193252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405071.1;locus_tag=LDO38_RS18965;product=DUF2288 domain-containing protein;protein_id=WP_034193252.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 25545 26915 . + . ID=gene-LDO38_RS18970;Name=LDO38_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18970;old_locus_tag=BVI2075_50031 NZ_CAJZAL010000152.1 Protein Homology CDS 25545 26915 . + 0 ID=cds-WP_069246203.1;Parent=gene-LDO38_RS18970;Dbxref=GenBank:WP_069246203.1;Name=WP_069246203.1;Ontology_term=GO:0006855,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884306.1;locus_tag=LDO38_RS18970;product=MATE family efflux transporter;protein_id=WP_069246203.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 26932 27117 . - . ID=gene-LDO38_RS18975;Name=LDO38_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18975;old_locus_tag=BVI2075_50032 NZ_CAJZAL010000152.1 Protein Homology CDS 26932 27117 . - 0 ID=cds-WP_069246202.1;Parent=gene-LDO38_RS18975;Dbxref=GenBank:WP_069246202.1;Name=WP_069246202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884305.1;locus_tag=LDO38_RS18975;product=hypothetical protein;protein_id=WP_069246202.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 27253 27423 . + . ID=gene-LDO38_RS18980;Name=LDO38_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18980;old_locus_tag=BVI2075_50033 NZ_CAJZAL010000152.1 Protein Homology CDS 27253 27423 . + 0 ID=cds-WP_011884304.1;Parent=gene-LDO38_RS18980;Dbxref=GenBank:WP_011884304.1;Name=WP_011884304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191316.1;locus_tag=LDO38_RS18980;product=hypothetical protein;protein_id=WP_011884304.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 27614 28420 . - . ID=gene-LDO38_RS18985;Name=LDO38_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS18985;old_locus_tag=BVI2075_50034 NZ_CAJZAL010000152.1 Protein Homology CDS 27614 28420 . - 0 ID=cds-WP_011884303.1;Parent=gene-LDO38_RS18985;Dbxref=GenBank:WP_011884303.1;Name=WP_011884303.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092640.1;locus_tag=LDO38_RS18985;product=GNAT family N-acetyltransferase;protein_id=WP_011884303.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 28581 29042 . - . ID=gene-LDO38_RS18990;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=LDO38_RS18990;old_locus_tag=BVI2075_50035 NZ_CAJZAL010000152.1 Protein Homology CDS 28581 29042 . - 0 ID=cds-WP_011884302.1;Parent=gene-LDO38_RS18990;Dbxref=GenBank:WP_011884302.1;Name=WP_011884302.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: protein motif:HMM:TIGR00249.1;locus_tag=LDO38_RS18990;product=phosphohistidine phosphatase SixA;protein_id=WP_011884302.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 29204 29280 . + . ID=gene-LDO38_RS18995;Name=LDO38_RS18995;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS18995;old_locus_tag=BVI2075_TRNA1 NZ_CAJZAL010000152.1 tRNAscan-SE tRNA 29204 29280 . + . ID=rna-LDO38_RS18995;Parent=gene-LDO38_RS18995;anticodon=(pos:29238..29240);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS18995;product=tRNA-Pro NZ_CAJZAL010000152.1 tRNAscan-SE exon 29204 29280 . + . ID=exon-LDO38_RS18995-1;Parent=rna-LDO38_RS18995;anticodon=(pos:29238..29240);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS18995;product=tRNA-Pro NZ_CAJZAL010000152.1 RefSeq gene 29423 29857 . + . ID=gene-LDO38_RS19000;Name=LDO38_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19000;old_locus_tag=BVI2075_50036 NZ_CAJZAL010000152.1 Protein Homology CDS 29423 29857 . + 0 ID=cds-WP_011884291.1;Parent=gene-LDO38_RS19000;Dbxref=GenBank:WP_011884291.1;Name=WP_011884291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884291.1;locus_tag=LDO38_RS19000;product=hypothetical protein;protein_id=WP_011884291.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 29923 31437 . - . ID=gene-LDO38_RS19005;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=LDO38_RS19005;old_locus_tag=BVI2075_50037 NZ_CAJZAL010000152.1 Protein Homology CDS 29923 31437 . - 0 ID=cds-WP_011884290.1;Parent=gene-LDO38_RS19005;Dbxref=GenBank:WP_011884290.1;Name=WP_011884290.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009970405.1;locus_tag=LDO38_RS19005;product=exopolyphosphatase;protein_id=WP_011884290.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 31721 33784 . + . ID=gene-LDO38_RS19010;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=LDO38_RS19010;old_locus_tag=BVI2075_50039 NZ_CAJZAL010000152.1 Protein Homology CDS 31721 33784 . + 0 ID=cds-WP_045579266.1;Parent=gene-LDO38_RS19010;Dbxref=GenBank:WP_045579266.1;Name=WP_045579266.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041492798.1;locus_tag=LDO38_RS19010;product=polyphosphate kinase 1;protein_id=WP_045579266.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 33902 35221 . - . ID=gene-LDO38_RS19015;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=LDO38_RS19015;old_locus_tag=BVI2075_50040 NZ_CAJZAL010000152.1 Protein Homology CDS 33902 35221 . - 0 ID=cds-WP_011884288.1;Parent=gene-LDO38_RS19015;Dbxref=GenBank:WP_011884288.1;Name=WP_011884288.1;Ontology_term=GO:0000160,GO:0006796,GO:0006817,GO:0000155;gbkey=CDS;gene=phoR;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphate-containing compound metabolic process|0006796||IEA,phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332665.1;locus_tag=LDO38_RS19015;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_011884288.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 35279 35980 . - . ID=gene-LDO38_RS19020;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=LDO38_RS19020;old_locus_tag=BVI2075_50041 NZ_CAJZAL010000152.1 Protein Homology CDS 35279 35980 . - 0 ID=cds-WP_006750313.1;Parent=gene-LDO38_RS19020;Dbxref=GenBank:WP_006750313.1;Name=WP_006750313.1;Ontology_term=GO:0000160,GO:0006355,GO:0006817,GO:0000156,GO:0003677;gbkey=CDS;gene=phoB;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332664.1;locus_tag=LDO38_RS19020;product=phosphate regulon transcriptional regulator PhoB;protein_id=WP_006750313.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 36012 36716 . - . ID=gene-LDO38_RS19025;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=LDO38_RS19025;old_locus_tag=BVI2075_50042 NZ_CAJZAL010000152.1 Protein Homology CDS 36012 36716 . - 0 ID=cds-WP_011884287.1;Parent=gene-LDO38_RS19025;Dbxref=GenBank:WP_011884287.1;Name=WP_011884287.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351613.1;locus_tag=LDO38_RS19025;product=phosphate signaling complex protein PhoU;protein_id=WP_011884287.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 36735 37583 . - . ID=gene-LDO38_RS19030;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=LDO38_RS19030;old_locus_tag=BVI2075_50043 NZ_CAJZAL010000152.1 Protein Homology CDS 36735 37583 . - 0 ID=cds-WP_011884286.1;Parent=gene-LDO38_RS19030;Dbxref=GenBank:WP_011884286.1;Name=WP_011884286.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401039.1;locus_tag=LDO38_RS19030;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_011884286.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 37599 38492 . - . ID=gene-LDO38_RS19035;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=LDO38_RS19035;old_locus_tag=BVI2075_50044 NZ_CAJZAL010000152.1 Protein Homology CDS 37599 38492 . - 0 ID=cds-WP_011884285.1;Parent=gene-LDO38_RS19035;Dbxref=GenBank:WP_011884285.1;Name=WP_011884285.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906011.1;locus_tag=LDO38_RS19035;product=phosphate ABC transporter permease PstA;protein_id=WP_011884285.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 38489 39475 . - . ID=gene-LDO38_RS19040;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=LDO38_RS19040;old_locus_tag=BVI2075_50045 NZ_CAJZAL010000152.1 Protein Homology CDS 38489 39475 . - 0 ID=cds-WP_069246201.1;Parent=gene-LDO38_RS19040;Dbxref=GenBank:WP_069246201.1;Name=WP_069246201.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417346.1;locus_tag=LDO38_RS19040;product=phosphate ABC transporter permease PstC;protein_id=WP_069246201.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 39571 40605 . - . ID=gene-LDO38_RS19045;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=LDO38_RS19045;old_locus_tag=BVI2075_50046 NZ_CAJZAL010000152.1 Protein Homology CDS 39571 40605 . - 0 ID=cds-WP_014722815.1;Parent=gene-LDO38_RS19045;Dbxref=GenBank:WP_014722815.1;Name=WP_014722815.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363555.1;locus_tag=LDO38_RS19045;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_014722815.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 41052 42407 . - . ID=gene-LDO38_RS19050;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=LDO38_RS19050;old_locus_tag=BVI2075_50048 NZ_CAJZAL010000152.1 Protein Homology CDS 41052 42407 . - 0 ID=cds-WP_011884282.1;Parent=gene-LDO38_RS19050;Dbxref=GenBank:WP_011884282.1;Name=WP_011884282.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004542480.1;locus_tag=LDO38_RS19050;product=phosphoglucosamine mutase;protein_id=WP_011884282.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 42444 43337 . - . ID=gene-LDO38_RS19055;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=LDO38_RS19055;old_locus_tag=BVI2075_50049 NZ_CAJZAL010000152.1 Protein Homology CDS 42444 43337 . - 0 ID=cds-WP_034193246.1;Parent=gene-LDO38_RS19055;Dbxref=GenBank:WP_034193246.1;Name=WP_034193246.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405091.1;locus_tag=LDO38_RS19055;product=dihydropteroate synthase;protein_id=WP_034193246.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 43414 45309 . - . ID=gene-LDO38_RS19060;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=LDO38_RS19060;old_locus_tag=BVI2075_50051 NZ_CAJZAL010000152.1 Protein Homology CDS 43414 45309 . - 0 ID=cds-WP_011884280.1;Parent=gene-LDO38_RS19060;Dbxref=GenBank:WP_011884280.1;Name=WP_011884280.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656500.1;locus_tag=LDO38_RS19060;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_011884280.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 45476 46138 . - . ID=gene-LDO38_RS19065;Name=LDO38_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19065;old_locus_tag=BVI2075_50053 NZ_CAJZAL010000152.1 Protein Homology CDS 45476 46138 . - 0 ID=cds-WP_011884279.1;Parent=gene-LDO38_RS19065;Dbxref=GenBank:WP_011884279.1;Name=WP_011884279.1;Ontology_term=GO:0001510,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009911930.1;locus_tag=LDO38_RS19065;product=RlmE family RNA methyltransferase;protein_id=WP_011884279.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 46332 46856 . + . ID=gene-LDO38_RS19070;Name=LDO38_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19070;old_locus_tag=BVI2075_50054 NZ_CAJZAL010000152.1 Protein Homology CDS 46332 46856 . + 0 ID=cds-WP_011884278.1;Parent=gene-LDO38_RS19070;Dbxref=GenBank:WP_011884278.1;Name=WP_011884278.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363551.1;locus_tag=LDO38_RS19070;product=YhbY family RNA-binding protein;protein_id=WP_011884278.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 46915 47373 . - . ID=gene-LDO38_RS19075;Name=LDO38_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19075;old_locus_tag=BVI2075_50056 NZ_CAJZAL010000152.1 Protein Homology CDS 46915 47373 . - 0 ID=cds-WP_011884277.1;Parent=gene-LDO38_RS19075;Dbxref=GenBank:WP_011884277.1;Name=WP_011884277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213687.1;locus_tag=LDO38_RS19075;product=DUF4149 domain-containing protein;protein_id=WP_011884277.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 47388 47864 . - . ID=gene-LDO38_RS19080;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=LDO38_RS19080;old_locus_tag=BVI2075_50057 NZ_CAJZAL010000152.1 Protein Homology CDS 47388 47864 . - 0 ID=cds-WP_011884276.1;Parent=gene-LDO38_RS19080;Dbxref=GenBank:WP_011884276.1;Name=WP_011884276.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534614.1;locus_tag=LDO38_RS19080;product=transcription elongation factor GreA;protein_id=WP_011884276.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 47983 51237 . - . ID=gene-LDO38_RS19085;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=LDO38_RS19085;old_locus_tag=BVI2075_50058 NZ_CAJZAL010000152.1 Protein Homology CDS 47983 51237 . - 0 ID=cds-WP_011884275.1;Parent=gene-LDO38_RS19085;Dbxref=GenBank:WP_011884275.1;Name=WP_011884275.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193866.1;locus_tag=LDO38_RS19085;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_011884275.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 51287 51967 . - . ID=gene-LDO38_RS19090;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=LDO38_RS19090;old_locus_tag=BVI2075_50059 NZ_CAJZAL010000152.1 Protein Homology CDS 51287 51967 . - 0 ID=cds-WP_059462292.1;Parent=gene-LDO38_RS19090;Dbxref=GenBank:WP_059462292.1;Name=WP_059462292.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192135.1;locus_tag=LDO38_RS19090;product=leucine efflux protein LeuE;protein_id=WP_059462292.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 52014 53159 . - . ID=gene-LDO38_RS19095;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=LDO38_RS19095;old_locus_tag=BVI2075_50060 NZ_CAJZAL010000152.1 Protein Homology CDS 52014 53159 . - 0 ID=cds-WP_011884273.1;Parent=gene-LDO38_RS19095;Dbxref=GenBank:WP_011884273.1;Name=WP_011884273.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697358.1;locus_tag=LDO38_RS19095;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_011884273.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 53519 54751 . - . ID=gene-LDO38_RS19100;Name=LDO38_RS19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19100;old_locus_tag=BVI2075_50062 NZ_CAJZAL010000152.1 Protein Homology CDS 53519 54751 . - 0 ID=cds-WP_045579269.1;Parent=gene-LDO38_RS19100;Dbxref=GenBank:WP_045579269.1;Name=WP_045579269.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897435.1;locus_tag=LDO38_RS19100;product=MFS transporter;protein_id=WP_045579269.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 54930 56501 . - . ID=gene-LDO38_RS19105;Name=LDO38_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19105;old_locus_tag=BVI2075_50063 NZ_CAJZAL010000152.1 Protein Homology CDS 54930 56501 . - 0 ID=cds-WP_011884271.1;Parent=gene-LDO38_RS19105;Dbxref=GenBank:WP_011884271.1;Name=WP_011884271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694247.1;locus_tag=LDO38_RS19105;product=transglycosylase SLT domain-containing protein;protein_id=WP_011884271.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 56653 57459 . - . ID=gene-LDO38_RS19110;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=LDO38_RS19110;old_locus_tag=BVI2075_50064 NZ_CAJZAL010000152.1 Protein Homology CDS 56653 57459 . - 0 ID=cds-WP_011884270.1;Parent=gene-LDO38_RS19110;Dbxref=GenBank:WP_011884270.1;Name=WP_011884270.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600438.1;locus_tag=LDO38_RS19110;product=hydroxyacylglutathione hydrolase;protein_id=WP_011884270.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 57478 58290 . + . ID=gene-LDO38_RS19115;Name=LDO38_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19115;old_locus_tag=BVI2075_50066 NZ_CAJZAL010000152.1 Protein Homology CDS 57478 58290 . + 0 ID=cds-WP_011884269.1;Parent=gene-LDO38_RS19115;Dbxref=GenBank:WP_011884269.1;Name=WP_011884269.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004556858.1;locus_tag=LDO38_RS19115;product=class I SAM-dependent methyltransferase;protein_id=WP_011884269.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 58287 58730 . + . ID=gene-LDO38_RS19120;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=LDO38_RS19120;old_locus_tag=BVI2075_50065 NZ_CAJZAL010000152.1 Protein Homology CDS 58287 58730 . + 0 ID=cds-WP_011884268.1;Parent=gene-LDO38_RS19120;Dbxref=GenBank:WP_011884268.1;Name=WP_011884268.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764660.1;locus_tag=LDO38_RS19120;product=ribonuclease HI;protein_id=WP_011884268.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 58769 59503 . + . ID=gene-LDO38_RS19125;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=LDO38_RS19125;old_locus_tag=BVI2075_50067 NZ_CAJZAL010000152.1 Protein Homology CDS 58769 59503 . + 0 ID=cds-WP_011884267.1;Parent=gene-LDO38_RS19125;Dbxref=GenBank:WP_011884267.1;Name=WP_011884267.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656490.1;locus_tag=LDO38_RS19125;product=DNA polymerase III subunit epsilon;protein_id=WP_011884267.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 59538 59870 . - . ID=gene-LDO38_RS19130;Name=LDO38_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19130;old_locus_tag=BVI2075_50068 NZ_CAJZAL010000152.1 Protein Homology CDS 59538 59870 . - 0 ID=cds-WP_059894796.1;Parent=gene-LDO38_RS19130;Dbxref=GenBank:WP_059894796.1;Name=WP_059894796.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656489.1;locus_tag=LDO38_RS19130;product=YnfA family protein;protein_id=WP_059894796.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 60423 61907 . + . ID=gene-LDO38_RS19135;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=LDO38_RS19135;old_locus_tag=BVI2075_50069 NZ_CAJZAL010000152.1 Protein Homology CDS 60423 61907 . + 0 ID=cds-WP_011884265.1;Parent=gene-LDO38_RS19135;Dbxref=GenBank:WP_011884265.1;Name=WP_011884265.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332641.1;locus_tag=LDO38_RS19135;product=glycine betaine/L-proline transporter ProP;protein_id=WP_011884265.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 62035 62241 . - . ID=gene-LDO38_RS19140;Name=LDO38_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19140;old_locus_tag=BVI2075_50071 NZ_CAJZAL010000152.1 Protein Homology CDS 62035 62241 . - 0 ID=cds-WP_014722807.1;Parent=gene-LDO38_RS19140;Dbxref=GenBank:WP_014722807.1;Name=WP_014722807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722807.1;locus_tag=LDO38_RS19140;product=hypothetical protein;protein_id=WP_014722807.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 62610 63239 . - . ID=gene-LDO38_RS19145;Name=LDO38_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19145;old_locus_tag=BVI2075_50072 NZ_CAJZAL010000152.1 Protein Homology CDS 62610 63239 . - 0 ID=cds-WP_069246200.1;Parent=gene-LDO38_RS19145;Dbxref=GenBank:WP_069246200.1;Name=WP_069246200.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851393.1;locus_tag=LDO38_RS19145;product=glutathione S-transferase family protein;protein_id=WP_069246200.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 63420 64643 . + . ID=gene-LDO38_RS19150;Name=phaZ;gbkey=Gene;gene=phaZ;gene_biotype=protein_coding;locus_tag=LDO38_RS19150;old_locus_tag=BVI2075_50073 NZ_CAJZAL010000152.1 Protein Homology CDS 63420 64643 . + 0 ID=cds-WP_059734058.1;Parent=gene-LDO38_RS19150;Dbxref=GenBank:WP_059734058.1;Name=WP_059734058.1;gbkey=CDS;gene=phaZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405099.1;locus_tag=LDO38_RS19150;product=polyhydroxyalkanoate depolymerase;protein_id=WP_059734058.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 64630 65310 . - . ID=gene-LDO38_RS19155;Name=LDO38_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19155;old_locus_tag=BVI2075_50074 NZ_CAJZAL010000152.1 Protein Homology CDS 64630 65310 . - 0 ID=cds-WP_080957807.1;Parent=gene-LDO38_RS19155;Dbxref=GenBank:WP_080957807.1;Name=WP_080957807.1;Ontology_term=GO:0016772;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722805.1;locus_tag=LDO38_RS19155;product=phosphoribosyltransferase;protein_id=WP_080957807.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 65637 66158 . - . ID=gene-LDO38_RS19160;Name=LDO38_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19160;old_locus_tag=BVI2075_50075 NZ_CAJZAL010000152.1 Protein Homology CDS 65637 66158 . - 0 ID=cds-WP_045579270.1;Parent=gene-LDO38_RS19160;Dbxref=GenBank:WP_045579270.1;Name=WP_045579270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722804.1;locus_tag=LDO38_RS19160;product=phospholipase D-like domain-containing protein;protein_id=WP_045579270.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 66315 67247 . - . ID=gene-LDO38_RS19165;Name=LDO38_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19165;old_locus_tag=BVI2075_50077 NZ_CAJZAL010000152.1 Protein Homology CDS 66315 67247 . - 0 ID=cds-WP_059462911.1;Parent=gene-LDO38_RS19165;Dbxref=GenBank:WP_059462911.1;Name=WP_059462911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722803.1;locus_tag=LDO38_RS19165;product=acyltransferase domain-containing protein;protein_id=WP_059462911.1;transl_table=11 NZ_CAJZAL010000152.1 RefSeq gene 67292 67452 . - . ID=gene-LDO38_RS19170;Name=LDO38_RS19170;end_range=67452,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19170;partial=true;start_range=.,67292 NZ_CAJZAL010000152.1 Protein Homology CDS 67292 67452 . - 0 ID=cds-WP_224056578.1;Parent=gene-LDO38_RS19170;Dbxref=GenBank:WP_224056578.1;Name=WP_224056578.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;end_range=67452,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405102.1;locus_tag=LDO38_RS19170;partial=true;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_224056578.1;start_range=.,67292;transl_table=11 ##sequence-region NZ_CAJZAL010000153.1 1 15443 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000153.1 RefSeq region 1 15443 . + . ID=NZ_CAJZAL010000153.1:1..15443;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_50 NZ_CAJZAL010000153.1 RefSeq gene 1 1355 . + . ID=gene-LDO38_RS19175;Name=LDO38_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19175;old_locus_tag=BVI2075_500001;partial=true;start_range=.,1 NZ_CAJZAL010000153.1 Protein Homology CDS 1 1355 . + 2 ID=cds-WP_224056579.1;Parent=gene-LDO38_RS19175;Dbxref=GenBank:WP_224056579.1;Name=WP_224056579.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546713.1;locus_tag=LDO38_RS19175;partial=true;product=chemotaxis protein CheW;protein_id=WP_224056579.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000153.1 RefSeq gene 1404 1919 . + . ID=gene-LDO38_RS19180;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=LDO38_RS19180;old_locus_tag=BVI2075_500002 NZ_CAJZAL010000153.1 Protein Homology CDS 1404 1919 . + 0 ID=cds-WP_011882907.1;Parent=gene-LDO38_RS19180;Dbxref=GenBank:WP_011882907.1;Name=WP_011882907.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401394.1;locus_tag=LDO38_RS19180;product=chemotaxis protein CheW;protein_id=WP_011882907.1;transl_table=11 NZ_CAJZAL010000153.1 RefSeq gene 1957 3909 . + . ID=gene-LDO38_RS19185;Name=LDO38_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19185;old_locus_tag=BVI2075_500003 NZ_CAJZAL010000153.1 Protein Homology CDS 1957 3909 . + 0 ID=cds-WP_014722234.1;Parent=gene-LDO38_RS19185;Dbxref=GenBank:WP_014722234.1;Name=WP_014722234.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722234.1;locus_tag=LDO38_RS19185;product=methyl-accepting chemotaxis protein;protein_id=WP_014722234.1;transl_table=11 NZ_CAJZAL010000153.1 RefSeq gene 3913 4893 . + . ID=gene-LDO38_RS19190;Name=LDO38_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19190;old_locus_tag=BVI2075_500004 NZ_CAJZAL010000153.1 Protein Homology CDS 3913 4893 . + 0 ID=cds-WP_011882909.1;Parent=gene-LDO38_RS19190;Dbxref=GenBank:WP_011882909.1;Name=WP_011882909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882909.1;locus_tag=LDO38_RS19190;product=CheR family methyltransferase;protein_id=WP_011882909.1;transl_table=11 NZ_CAJZAL010000153.1 RefSeq gene 4893 5633 . + . ID=gene-LDO38_RS19195;Name=cheD;gbkey=Gene;gene=cheD;gene_biotype=protein_coding;locus_tag=LDO38_RS19195;old_locus_tag=BVI2075_500005 NZ_CAJZAL010000153.1 Protein Homology CDS 4893 5633 . + 0 ID=cds-WP_011882910.1;Parent=gene-LDO38_RS19195;Dbxref=GenBank:WP_011882910.1;Name=WP_011882910.1;gbkey=CDS;gene=cheD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882910.1;locus_tag=LDO38_RS19195;product=chemoreceptor glutamine deamidase CheD;protein_id=WP_011882910.1;transl_table=11 NZ_CAJZAL010000153.1 RefSeq gene 5639 6730 . + . ID=gene-LDO38_RS19200;Name=LDO38_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19200;old_locus_tag=BVI2075_500006 NZ_CAJZAL010000153.1 Protein Homology CDS 5639 6730 . + 0 ID=cds-WP_011882911.1;Parent=gene-LDO38_RS19200;Dbxref=GenBank:WP_011882911.1;Name=WP_011882911.1;Ontology_term=GO:0006482,GO:0006935,GO:0018277,GO:0000156,GO:0008984,GO:0050568,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphorelay response regulator activity|0000156||IEA,protein-glutamate methylesterase activity|0008984||IEA,protein-glutamine glutaminase activity|0050568||IEA;go_process=protein demethylation|0006482||IEA,chemotaxis|0006935||IEA,protein deamination|0018277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895566.1;locus_tag=LDO38_RS19200;product=protein-glutamate methylesterase/protein-glutamine glutaminase;protein_id=WP_011882911.1;transl_table=11 NZ_CAJZAL010000153.1 RefSeq gene 6798 7193 . + . ID=gene-LDO38_RS19205;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=LDO38_RS19205;old_locus_tag=BVI2075_500007 NZ_CAJZAL010000153.1 Protein Homology CDS 6798 7193 . + 0 ID=cds-WP_006754880.1;Parent=gene-LDO38_RS19205;Dbxref=GenBank:WP_006754880.1;Name=WP_006754880.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754880.1;locus_tag=LDO38_RS19205;product=chemotaxis response regulator CheY;protein_id=WP_006754880.1;transl_table=11 NZ_CAJZAL010000153.1 RefSeq gene 7195 7926 . + . ID=gene-LDO38_RS19210;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=LDO38_RS19210;old_locus_tag=BVI2075_500008 NZ_CAJZAL010000153.1 Protein Homology CDS 7195 7926 . + 0 ID=cds-WP_011882912.1;Parent=gene-LDO38_RS19210;Dbxref=GenBank:WP_011882912.1;Name=WP_011882912.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350602.1;locus_tag=LDO38_RS19210;product=protein phosphatase CheZ;protein_id=WP_011882912.1;transl_table=11 NZ_CAJZAL010000153.1 RefSeq gene 8239 8745 . + . ID=gene-LDO38_RS19215;Name=LDO38_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19215;old_locus_tag=BVI2075_500009 NZ_CAJZAL010000153.1 Protein Homology CDS 8239 8745 . + 0 ID=cds-WP_011882913.1;Parent=gene-LDO38_RS19215;Dbxref=GenBank:WP_011882913.1;Name=WP_011882913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546708.1;locus_tag=LDO38_RS19215;product=DUF2844 domain-containing protein;protein_id=WP_011882913.1;transl_table=11 NZ_CAJZAL010000153.1 RefSeq gene 8762 10015 . + . ID=gene-LDO38_RS19220;Name=LDO38_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19220;old_locus_tag=BVI2075_500010 NZ_CAJZAL010000153.1 Protein Homology CDS 8762 10015 . + 0 ID=cds-WP_224056580.1;Parent=gene-LDO38_RS19220;Dbxref=GenBank:WP_224056580.1;Name=WP_224056580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212518.1;locus_tag=LDO38_RS19220;product=DUF3443 domain-containing protein;protein_id=WP_224056580.1;transl_table=11 NZ_CAJZAL010000153.1 RefSeq gene 10179 10676 . + . ID=gene-LDO38_RS19225;Name=LDO38_RS19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19225;old_locus_tag=BVI2075_500012 NZ_CAJZAL010000153.1 Protein Homology CDS 10179 10676 . + 0 ID=cds-WP_011882915.1;Parent=gene-LDO38_RS19225;Dbxref=GenBank:WP_011882915.1;Name=WP_011882915.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198641.1;locus_tag=LDO38_RS19225;product=VOC family protein;protein_id=WP_011882915.1;transl_table=11 NZ_CAJZAL010000153.1 RefSeq gene 10915 11406 . + . ID=gene-LDO38_RS19230;Name=LDO38_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19230;old_locus_tag=BVI2075_500013 NZ_CAJZAL010000153.1 Protein Homology CDS 10915 11406 . + 0 ID=cds-WP_346268555.1;Parent=gene-LDO38_RS19230;Dbxref=GenBank:WP_346268555.1;Name=WP_346268555.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF017470.6;locus_tag=LDO38_RS19230;product=DUF805 domain-containing protein;protein_id=WP_346268555.1;transl_table=11 NZ_CAJZAL010000153.1 RefSeq gene 11884 13083 . + . ID=gene-LDO38_RS19235;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=LDO38_RS19235;old_locus_tag=BVI2075_500015 NZ_CAJZAL010000153.1 Protein Homology CDS 11884 13083 . + 0 ID=cds-WP_011882917.1;Parent=gene-LDO38_RS19235;Dbxref=GenBank:WP_011882917.1;Name=WP_011882917.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761747.1;locus_tag=LDO38_RS19235;product=flagellar biosynthesis protein FlhB;protein_id=WP_011882917.1;transl_table=11 NZ_CAJZAL010000153.1 RefSeq gene 13080 15182 . + . ID=gene-LDO38_RS19240;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=LDO38_RS19240;old_locus_tag=BVI2075_500016 NZ_CAJZAL010000153.1 Protein Homology CDS 13080 15182 . + 0 ID=cds-WP_034192934.1;Parent=gene-LDO38_RS19240;Dbxref=GenBank:WP_034192934.1;Name=WP_034192934.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602362.1;locus_tag=LDO38_RS19240;product=flagellar biosynthesis protein FlhA;protein_id=WP_034192934.1;transl_table=11 NZ_CAJZAL010000153.1 RefSeq pseudogene 15179 15443 . + . ID=gene-LDO38_RS19245;Name=LDO38_RS19245;end_range=15443,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS19245;partial=true;pseudo=true NZ_CAJZAL010000153.1 Protein Homology CDS 15179 15443 . + 0 ID=cds-LDO38_RS19245;Parent=gene-LDO38_RS19245;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=15443,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018418776.1;locus_tag=LDO38_RS19245;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000154.1 1 47001 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000154.1 RefSeq region 1 47001 . + . ID=NZ_CAJZAL010000154.1:1..47001;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_51 NZ_CAJZAL010000154.1 RefSeq gene 1 1034 . - . ID=gene-LDO38_RS19250;Name=LDO38_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19250;partial=true;start_range=.,1 NZ_CAJZAL010000154.1 Protein Homology CDS 1 1034 . - 0 ID=cds-WP_224056581.1;Parent=gene-LDO38_RS19250;Dbxref=GenBank:WP_224056581.1;Name=WP_224056581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493661.1;locus_tag=LDO38_RS19250;partial=true;product=dihydroxyacetone kinase family protein;protein_id=WP_224056581.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 1280 2170 . - . ID=gene-LDO38_RS19255;Name=LDO38_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19255;old_locus_tag=BVI2075_510003 NZ_CAJZAL010000154.1 Protein Homology CDS 1280 2170 . - 0 ID=cds-WP_034194411.1;Parent=gene-LDO38_RS19255;Dbxref=GenBank:WP_034194411.1;Name=WP_034194411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372166.1;locus_tag=LDO38_RS19255;product=LysR substrate-binding domain-containing protein;protein_id=WP_034194411.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 2324 5374 . + . ID=gene-LDO38_RS19260;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=LDO38_RS19260;old_locus_tag=BVI2075_510002 NZ_CAJZAL010000154.1 Protein Homology CDS 2324 5374 . + 0 ID=cds-WP_224056582.1;Parent=gene-LDO38_RS19260;Dbxref=GenBank:WP_224056582.1;Name=WP_224056582.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase (NAD+) activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726285.1;locus_tag=LDO38_RS19260;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_224056582.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 5470 5772 . - . ID=gene-LDO38_RS19265;Name=LDO38_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19265;old_locus_tag=BVI2075_510004 NZ_CAJZAL010000154.1 Protein Homology CDS 5470 5772 . - 0 ID=cds-WP_014726284.1;Parent=gene-LDO38_RS19265;Dbxref=GenBank:WP_014726284.1;Name=WP_014726284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726284.1;locus_tag=LDO38_RS19265;product=hypothetical protein;protein_id=WP_014726284.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 5859 7013 . - . ID=gene-LDO38_RS19270;Name=LDO38_RS19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19270;old_locus_tag=BVI2075_510005 NZ_CAJZAL010000154.1 Protein Homology CDS 5859 7013 . - 0 ID=cds-WP_011880662.1;Parent=gene-LDO38_RS19270;Dbxref=GenBank:WP_011880662.1;Name=WP_011880662.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726283.1;locus_tag=LDO38_RS19270;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_011880662.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 7600 8511 . - . ID=gene-LDO38_RS19275;Name=LDO38_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19275;old_locus_tag=BVI2075_510006 NZ_CAJZAL010000154.1 Protein Homology CDS 7600 8511 . - 0 ID=cds-WP_034194413.1;Parent=gene-LDO38_RS19275;Dbxref=GenBank:WP_034194413.1;Name=WP_034194413.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549321.1;locus_tag=LDO38_RS19275;product=DMT family transporter;protein_id=WP_034194413.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 8569 9528 . + . ID=gene-LDO38_RS19280;Name=LDO38_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19280;old_locus_tag=BVI2075_510007 NZ_CAJZAL010000154.1 Protein Homology CDS 8569 9528 . + 0 ID=cds-WP_041494418.1;Parent=gene-LDO38_RS19280;Dbxref=GenBank:WP_041494418.1;Name=WP_041494418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481033.1;locus_tag=LDO38_RS19280;product=LysR substrate-binding domain-containing protein;protein_id=WP_041494418.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 9680 10339 . + . ID=gene-LDO38_RS19285;Name=LDO38_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19285;old_locus_tag=BVI2075_510008 NZ_CAJZAL010000154.1 Protein Homology CDS 9680 10339 . + 0 ID=cds-WP_011880661.1;Parent=gene-LDO38_RS19285;Dbxref=GenBank:WP_011880661.1;Name=WP_011880661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749736.1;locus_tag=LDO38_RS19285;product=hypothetical protein;protein_id=WP_011880661.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 10416 10874 . + . ID=gene-LDO38_RS19290;Name=LDO38_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19290;old_locus_tag=BVI2075_510009 NZ_CAJZAL010000154.1 Protein Homology CDS 10416 10874 . + 0 ID=cds-WP_046428431.1;Parent=gene-LDO38_RS19290;Dbxref=GenBank:WP_046428431.1;Name=WP_046428431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767060.1;locus_tag=LDO38_RS19290;product=hypothetical protein;protein_id=WP_046428431.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 10933 12786 . - . ID=gene-LDO38_RS19295;Name=LDO38_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19295;old_locus_tag=BVI2075_510010 NZ_CAJZAL010000154.1 Protein Homology CDS 10933 12786 . - 0 ID=cds-WP_059559800.1;Parent=gene-LDO38_RS19295;Dbxref=GenBank:WP_059559800.1;Name=WP_059559800.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399227.1;locus_tag=LDO38_RS19295;product=ABC transporter ATP-binding protein;protein_id=WP_059559800.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 12988 13554 . + . ID=gene-LDO38_RS19300;Name=LDO38_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19300;old_locus_tag=BVI2075_510011 NZ_CAJZAL010000154.1 Protein Homology CDS 12988 13554 . + 0 ID=cds-WP_011880658.1;Parent=gene-LDO38_RS19300;Dbxref=GenBank:WP_011880658.1;Name=WP_011880658.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490955.1;locus_tag=LDO38_RS19300;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011880658.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 13772 14197 . + . ID=gene-LDO38_RS19305;Name=LDO38_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19305;old_locus_tag=BVI2075_510012 NZ_CAJZAL010000154.1 Protein Homology CDS 13772 14197 . + 0 ID=cds-WP_011880657.1;Parent=gene-LDO38_RS19305;Dbxref=GenBank:WP_011880657.1;Name=WP_011880657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767064.1;locus_tag=LDO38_RS19305;product=organic hydroperoxide resistance protein;protein_id=WP_011880657.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 14270 15304 . + . ID=gene-LDO38_RS19310;Name=LDO38_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19310;old_locus_tag=BVI2075_510013 NZ_CAJZAL010000154.1 Protein Homology CDS 14270 15304 . + 0 ID=cds-WP_011880656.1;Parent=gene-LDO38_RS19310;Dbxref=GenBank:WP_011880656.1;Name=WP_011880656.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416006.1;locus_tag=LDO38_RS19310;product=alpha/beta hydrolase;protein_id=WP_011880656.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 15580 15951 . + . ID=gene-LDO38_RS19315;Name=LDO38_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19315;old_locus_tag=BVI2075_510014 NZ_CAJZAL010000154.1 Protein Homology CDS 15580 15951 . + 0 ID=cds-WP_059559797.1;Parent=gene-LDO38_RS19315;Dbxref=GenBank:WP_059559797.1;Name=WP_059559797.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337109.1;locus_tag=LDO38_RS19315;product=CidA/LrgA family protein;protein_id=WP_059559797.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 15948 16682 . + . ID=gene-LDO38_RS19320;Name=LDO38_RS19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19320;old_locus_tag=BVI2075_510015 NZ_CAJZAL010000154.1 Protein Homology CDS 15948 16682 . + 0 ID=cds-WP_011880654.1;Parent=gene-LDO38_RS19320;Dbxref=GenBank:WP_011880654.1;Name=WP_011880654.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372191.1;locus_tag=LDO38_RS19320;product=LrgB family protein;protein_id=WP_011880654.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 16972 17301 . + . ID=gene-LDO38_RS19325;Name=LDO38_RS19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19325;old_locus_tag=BVI2075_510016 NZ_CAJZAL010000154.1 Protein Homology CDS 16972 17301 . + 0 ID=cds-WP_059461855.1;Parent=gene-LDO38_RS19325;Dbxref=GenBank:WP_059461855.1;Name=WP_059461855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490956.1;locus_tag=LDO38_RS19325;product=hypothetical protein;protein_id=WP_059461855.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 17797 18399 . - . ID=gene-LDO38_RS19330;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=LDO38_RS19330;old_locus_tag=BVI2075_510017 NZ_CAJZAL010000154.1 Protein Homology CDS 17797 18399 . - 0 ID=cds-WP_011880650.1;Parent=gene-LDO38_RS19330;Dbxref=GenBank:WP_011880650.1;Name=WP_011880650.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350320.1;locus_tag=LDO38_RS19330;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_011880650.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 18462 19187 . - . ID=gene-LDO38_RS19335;Name=LDO38_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19335;old_locus_tag=BVI2075_510018 NZ_CAJZAL010000154.1 Protein Homology CDS 18462 19187 . - 0 ID=cds-WP_059695287.1;Parent=gene-LDO38_RS19335;Dbxref=GenBank:WP_059695287.1;Name=WP_059695287.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525454.1;locus_tag=LDO38_RS19335;product=pirin family protein;protein_id=WP_059695287.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 19316 20209 . + . ID=gene-LDO38_RS19340;Name=LDO38_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19340;old_locus_tag=BVI2075_510019 NZ_CAJZAL010000154.1 Protein Homology CDS 19316 20209 . + 0 ID=cds-WP_011880648.1;Parent=gene-LDO38_RS19340;Dbxref=GenBank:WP_011880648.1;Name=WP_011880648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880648.1;locus_tag=LDO38_RS19340;product=LysR family transcriptional regulator;protein_id=WP_011880648.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 20383 21426 . + . ID=gene-LDO38_RS19345;Name=LDO38_RS19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19345;old_locus_tag=BVI2075_510020 NZ_CAJZAL010000154.1 Protein Homology CDS 20383 21426 . + 0 ID=cds-WP_435520959.1;Parent=gene-LDO38_RS19345;Dbxref=GenBank:WP_435520959.1;Name=WP_435520959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880647.1;locus_tag=LDO38_RS19345;product=lysozyme inhibitor LprI family protein;protein_id=WP_435520959.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 21751 22164 . + . ID=gene-LDO38_RS19350;Name=LDO38_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19350;old_locus_tag=BVI2075_510021 NZ_CAJZAL010000154.1 Protein Homology CDS 21751 22164 . + 0 ID=cds-WP_045580006.1;Parent=gene-LDO38_RS19350;Dbxref=GenBank:WP_045580006.1;Name=WP_045580006.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760672.1;locus_tag=LDO38_RS19350;product=DoxX family protein;protein_id=WP_045580006.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 22336 23280 . + . ID=gene-LDO38_RS19355;Name=LDO38_RS19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19355;old_locus_tag=BVI2075_510022 NZ_CAJZAL010000154.1 Protein Homology CDS 22336 23280 . + 0 ID=cds-WP_059559791.1;Parent=gene-LDO38_RS19355;Dbxref=GenBank:WP_059559791.1;Name=WP_059559791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750596.1;locus_tag=LDO38_RS19355;product=dTDP-4-dehydrorhamnose reductase family protein;protein_id=WP_059559791.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 23654 23983 . + . ID=gene-LDO38_RS19360;Name=LDO38_RS19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19360;old_locus_tag=BVI2075_510023 NZ_CAJZAL010000154.1 Protein Homology CDS 23654 23983 . + 0 ID=cds-WP_011880644.1;Parent=gene-LDO38_RS19360;Dbxref=GenBank:WP_011880644.1;Name=WP_011880644.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760669.1;locus_tag=LDO38_RS19360;product=H-NS histone family protein;protein_id=WP_011880644.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 24282 25529 . + . ID=gene-LDO38_RS19365;Name=LDO38_RS19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19365;old_locus_tag=BVI2075_510025 NZ_CAJZAL010000154.1 Protein Homology CDS 24282 25529 . + 0 ID=cds-WP_014726270.1;Parent=gene-LDO38_RS19365;Dbxref=GenBank:WP_014726270.1;Name=WP_014726270.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754640.1;locus_tag=LDO38_RS19365;product=MFS transporter;protein_id=WP_014726270.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 25606 26685 . - . ID=gene-LDO38_RS19370;Name=LDO38_RS19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19370;old_locus_tag=BVI2075_510026 NZ_CAJZAL010000154.1 Protein Homology CDS 25606 26685 . - 0 ID=cds-WP_014726269.1;Parent=gene-LDO38_RS19370;Dbxref=GenBank:WP_014726269.1;Name=WP_014726269.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726269.1;locus_tag=LDO38_RS19370;product=AraC family transcriptional regulator;protein_id=WP_014726269.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 26933 28345 . + . ID=gene-LDO38_RS19375;Name=LDO38_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19375;old_locus_tag=BVI2075_510027 NZ_CAJZAL010000154.1 Protein Homology CDS 26933 28345 . + 0 ID=cds-WP_034194421.1;Parent=gene-LDO38_RS19375;Dbxref=GenBank:WP_034194421.1;Name=WP_034194421.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416950.1;locus_tag=LDO38_RS19375;product=APC family permease;protein_id=WP_034194421.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 28400 29797 . + . ID=gene-LDO38_RS19380;Name=LDO38_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19380;old_locus_tag=BVI2075_510028 NZ_CAJZAL010000154.1 Protein Homology CDS 28400 29797 . + 0 ID=cds-WP_034194422.1;Parent=gene-LDO38_RS19380;Dbxref=GenBank:WP_034194422.1;Name=WP_034194422.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880641.1;locus_tag=LDO38_RS19380;product=aspartate aminotransferase family protein;protein_id=WP_034194422.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 29834 31258 . + . ID=gene-LDO38_RS19385;Name=LDO38_RS19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19385;old_locus_tag=BVI2075_510029 NZ_CAJZAL010000154.1 Protein Homology CDS 29834 31258 . + 0 ID=cds-WP_014726268.1;Parent=gene-LDO38_RS19385;Dbxref=GenBank:WP_014726268.1;Name=WP_014726268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880640.1;locus_tag=LDO38_RS19385;product=aldehyde dehydrogenase family protein;protein_id=WP_014726268.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 31258 32760 . + . ID=gene-LDO38_RS19390;Name=LDO38_RS19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19390;old_locus_tag=BVI2075_510030 NZ_CAJZAL010000154.1 Protein Homology CDS 31258 32760 . + 0 ID=cds-WP_059461853.1;Parent=gene-LDO38_RS19390;Dbxref=GenBank:WP_059461853.1;Name=WP_059461853.1;Ontology_term=GO:0006508,GO:0008237,GO:0008270;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726264.1;locus_tag=LDO38_RS19390;product=M81 family metallopeptidase;protein_id=WP_059461853.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 32875 34062 . + . ID=gene-LDO38_RS19395;Name=LDO38_RS19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19395;old_locus_tag=BVI2075_510031 NZ_CAJZAL010000154.1 Protein Homology CDS 32875 34062 . + 0 ID=cds-WP_034194426.1;Parent=gene-LDO38_RS19395;Dbxref=GenBank:WP_034194426.1;Name=WP_034194426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399148.1;locus_tag=LDO38_RS19395;product=YncE family protein;protein_id=WP_034194426.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 34330 34464 . - . ID=gene-LDO38_RS30100;Name=LDO38_RS30100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30100;old_locus_tag=BVI2075_510032 NZ_CAJZAL010000154.1 Protein Homology CDS 34330 34464 . - 0 ID=cds-WP_011880630.1;Parent=gene-LDO38_RS30100;Dbxref=GenBank:WP_011880630.1;Name=WP_011880630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880630.1;locus_tag=LDO38_RS30100;product=hypothetical protein;protein_id=WP_011880630.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 34801 35229 . + . ID=gene-LDO38_RS19400;Name=LDO38_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19400;old_locus_tag=BVI2075_510033 NZ_CAJZAL010000154.1 Protein Homology CDS 34801 35229 . + 0 ID=cds-WP_212152725.1;Parent=gene-LDO38_RS19400;Dbxref=GenBank:WP_212152725.1;Name=WP_212152725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760662.1;locus_tag=LDO38_RS19400;product=hypothetical protein;protein_id=WP_212152725.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 35308 36120 . + . ID=gene-LDO38_RS19405;Name=LDO38_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19405;old_locus_tag=BVI2075_510034 NZ_CAJZAL010000154.1 Protein Homology CDS 35308 36120 . + 0 ID=cds-WP_045579888.1;Parent=gene-LDO38_RS19405;Dbxref=GenBank:WP_045579888.1;Name=WP_045579888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481116.1;locus_tag=LDO38_RS19405;product=alpha/beta fold hydrolase;protein_id=WP_045579888.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 36211 37152 . - . ID=gene-LDO38_RS19410;Name=LDO38_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19410;old_locus_tag=BVI2075_510035 NZ_CAJZAL010000154.1 Protein Homology CDS 36211 37152 . - 0 ID=cds-WP_014726259.1;Parent=gene-LDO38_RS19410;Dbxref=GenBank:WP_014726259.1;Name=WP_014726259.1;Ontology_term=GO:0009436,GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=glyoxylate catabolic process|0009436||IEA,obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660982.1;locus_tag=LDO38_RS19410;product=dihydrodipicolinate synthase family protein;protein_id=WP_014726259.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 37678 38358 . + . ID=gene-LDO38_RS19415;Name=LDO38_RS19415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19415;old_locus_tag=BVI2075_510037 NZ_CAJZAL010000154.1 Protein Homology CDS 37678 38358 . + 0 ID=cds-WP_011880625.1;Parent=gene-LDO38_RS19415;Dbxref=GenBank:WP_011880625.1;Name=WP_011880625.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750619.1;locus_tag=LDO38_RS19415;product=GntR family transcriptional regulator;protein_id=WP_011880625.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 38477 38671 . - . ID=gene-LDO38_RS19420;Name=LDO38_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19420;old_locus_tag=BVI2075_510038 NZ_CAJZAL010000154.1 Protein Homology CDS 38477 38671 . - 0 ID=cds-WP_072465533.1;Parent=gene-LDO38_RS19420;Dbxref=GenBank:WP_072465533.1;Name=WP_072465533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399114.1;locus_tag=LDO38_RS19420;product=hypothetical protein;protein_id=WP_072465533.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 39248 40234 . + . ID=gene-LDO38_RS19425;Name=LDO38_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19425;old_locus_tag=BVI2075_510040 NZ_CAJZAL010000154.1 Protein Homology CDS 39248 40234 . + 0 ID=cds-WP_011880623.1;Parent=gene-LDO38_RS19425;Dbxref=GenBank:WP_011880623.1;Name=WP_011880623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726257.1;locus_tag=LDO38_RS19425;product=TRAP transporter substrate-binding protein;protein_id=WP_011880623.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 40231 40800 . + . ID=gene-LDO38_RS19430;Name=LDO38_RS19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19430;old_locus_tag=BVI2075_510041 NZ_CAJZAL010000154.1 Protein Homology CDS 40231 40800 . + 0 ID=cds-WP_045579886.1;Parent=gene-LDO38_RS19430;Dbxref=GenBank:WP_045579886.1;Name=WP_045579886.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726256.1;locus_tag=LDO38_RS19430;product=TRAP transporter small permease;protein_id=WP_045579886.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 40805 42157 . + . ID=gene-LDO38_RS19435;Name=LDO38_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19435;old_locus_tag=BVI2075_510042 NZ_CAJZAL010000154.1 Protein Homology CDS 40805 42157 . + 0 ID=cds-WP_011880621.1;Parent=gene-LDO38_RS19435;Dbxref=GenBank:WP_011880621.1;Name=WP_011880621.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350121.1;locus_tag=LDO38_RS19435;product=TRAP transporter large permease;protein_id=WP_011880621.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 42609 43433 . + . ID=gene-LDO38_RS19440;Name=LDO38_RS19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19440;old_locus_tag=BVI2075_510043 NZ_CAJZAL010000154.1 Protein Homology CDS 42609 43433 . + 0 ID=cds-WP_224056584.1;Parent=gene-LDO38_RS19440;Dbxref=GenBank:WP_224056584.1;Name=WP_224056584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880620.1;locus_tag=LDO38_RS19440;product=alpha/beta fold hydrolase;protein_id=WP_224056584.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 43521 44990 . - . ID=gene-LDO38_RS19445;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=LDO38_RS19445;old_locus_tag=BVI2075_510044 NZ_CAJZAL010000154.1 Protein Homology CDS 43521 44990 . - 0 ID=cds-WP_059581243.1;Parent=gene-LDO38_RS19445;Dbxref=GenBank:WP_059581243.1;Name=WP_059581243.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372234.1;locus_tag=LDO38_RS19445;product=glycine betaine/L-proline transporter ProP;protein_id=WP_059581243.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 45472 46539 . - . ID=gene-LDO38_RS19450;Name=LDO38_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19450;old_locus_tag=BVI2075_510045 NZ_CAJZAL010000154.1 Protein Homology CDS 45472 46539 . - 0 ID=cds-WP_014726251.1;Parent=gene-LDO38_RS19450;Dbxref=GenBank:WP_014726251.1;Name=WP_014726251.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339490.1;locus_tag=LDO38_RS19450;product=porin;protein_id=WP_014726251.1;transl_table=11 NZ_CAJZAL010000154.1 RefSeq gene 46810 47001 . - . ID=gene-LDO38_RS19455;Name=LDO38_RS19455;end_range=47001,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19455;old_locus_tag=BVI2075_510047;partial=true;start_range=.,46810 NZ_CAJZAL010000154.1 Protein Homology CDS 46810 47001 . - 2 ID=cds-WP_224056585.1;Parent=gene-LDO38_RS19455;Dbxref=GenBank:WP_224056585.1;Name=WP_224056585.1;end_range=47001,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328876.1;locus_tag=LDO38_RS19455;partial=true;product=AMP-binding protein;protein_id=WP_224056585.1;start_range=.,46810;transl_table=11 ##sequence-region NZ_CAJZAL010000155.1 1 26326 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000155.1 RefSeq region 1 26326 . + . ID=NZ_CAJZAL010000155.1:1..26326;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_52 NZ_CAJZAL010000155.1 RefSeq gene 1 642 . - . ID=gene-LDO38_RS19460;Name=LDO38_RS19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19460;partial=true;start_range=.,1 NZ_CAJZAL010000155.1 Protein Homology CDS 1 642 . - 0 ID=cds-WP_224056586.1;Parent=gene-LDO38_RS19460;Dbxref=GenBank:WP_224056586.1;Name=WP_224056586.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880719.1;locus_tag=LDO38_RS19460;partial=true;product=AraC family ligand binding domain-containing protein;protein_id=WP_224056586.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 728 2029 . - . ID=gene-LDO38_RS19465;Name=LDO38_RS19465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19465;old_locus_tag=BVI2075_520002 NZ_CAJZAL010000155.1 Protein Homology CDS 728 2029 . - 0 ID=cds-WP_034195474.1;Parent=gene-LDO38_RS19465;Dbxref=GenBank:WP_034195474.1;Name=WP_034195474.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007176061.1;locus_tag=LDO38_RS19465;product=aspartate aminotransferase family protein;protein_id=WP_034195474.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 2106 2990 . + . ID=gene-LDO38_RS19470;Name=LDO38_RS19470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19470;old_locus_tag=BVI2075_520003 NZ_CAJZAL010000155.1 Protein Homology CDS 2106 2990 . + 0 ID=cds-WP_175658061.1;Parent=gene-LDO38_RS19470;Dbxref=GenBank:WP_175658061.1;Name=WP_175658061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493511.1;locus_tag=LDO38_RS19470;product=LysR family transcriptional regulator;protein_id=WP_175658061.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 3521 4810 . + . ID=gene-LDO38_RS19475;Name=LDO38_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19475;old_locus_tag=BVI2075_520005 NZ_CAJZAL010000155.1 Protein Homology CDS 3521 4810 . + 0 ID=cds-WP_059568722.1;Parent=gene-LDO38_RS19475;Dbxref=GenBank:WP_059568722.1;Name=WP_059568722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723934.1;locus_tag=LDO38_RS19475;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_059568722.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 5062 5703 . - . ID=gene-LDO38_RS19480;Name=LDO38_RS19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19480;old_locus_tag=BVI2075_520006 NZ_CAJZAL010000155.1 Protein Homology CDS 5062 5703 . - 0 ID=cds-WP_011880715.1;Parent=gene-LDO38_RS19480;Dbxref=GenBank:WP_011880715.1;Name=WP_011880715.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216579.1;locus_tag=LDO38_RS19480;product=response regulator;protein_id=WP_011880715.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 5677 6282 . + . ID=gene-LDO38_RS19485;Name=LDO38_RS19485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19485;old_locus_tag=BVI2075_520004 NZ_CAJZAL010000155.1 GeneMarkS-2+ CDS 5677 6282 . + 0 ID=cds-WP_124259672.1;Parent=gene-LDO38_RS19485;Dbxref=GenBank:WP_124259672.1;Name=WP_124259672.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS19485;product=flagellar transcriptional regulator FlhD;protein_id=WP_124259672.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 6323 8134 . - . ID=gene-LDO38_RS19490;Name=LDO38_RS19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19490;old_locus_tag=BVI2075_520007 NZ_CAJZAL010000155.1 Protein Homology CDS 6323 8134 . - 0 ID=cds-WP_011880714.1;Parent=gene-LDO38_RS19490;Dbxref=GenBank:WP_011880714.1;Name=WP_011880714.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723932.1;locus_tag=LDO38_RS19490;product=ATP-binding response regulator;protein_id=WP_011880714.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 8514 8598 . - . ID=gene-LDO38_RS19495;Name=LDO38_RS19495;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS19495;old_locus_tag=BVI2075_TRNA37 NZ_CAJZAL010000155.1 tRNAscan-SE tRNA 8514 8598 . - . ID=rna-LDO38_RS19495;Parent=gene-LDO38_RS19495;anticodon=(pos:complement(8562..8564));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS19495;product=tRNA-Leu NZ_CAJZAL010000155.1 tRNAscan-SE exon 8514 8598 . - . ID=exon-LDO38_RS19495-1;Parent=rna-LDO38_RS19495;anticodon=(pos:complement(8562..8564));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS19495;product=tRNA-Leu NZ_CAJZAL010000155.1 RefSeq gene 8746 10071 . + . ID=gene-LDO38_RS19500;Name=LDO38_RS19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19500;old_locus_tag=BVI2075_520009 NZ_CAJZAL010000155.1 Protein Homology CDS 8746 10071 . + 0 ID=cds-WP_014723930.1;Parent=gene-LDO38_RS19500;Dbxref=GenBank:WP_014723930.1;Name=WP_014723930.1;Ontology_term=GO:0006468,GO:0005515,GO:0005524;gbkey=CDS;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880713.1;locus_tag=LDO38_RS19500;product=leucine-rich repeat-containing protein kinase family protein;protein_id=WP_014723930.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 10110 10739 . - . ID=gene-LDO38_RS19505;Name=LDO38_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19505;old_locus_tag=BVI2075_520010 NZ_CAJZAL010000155.1 Protein Homology CDS 10110 10739 . - 0 ID=cds-WP_069240423.1;Parent=gene-LDO38_RS19505;Dbxref=GenBank:WP_069240423.1;Name=WP_069240423.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498820.1;locus_tag=LDO38_RS19505;product=LysE family translocator;protein_id=WP_069240423.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 10826 11002 . - . ID=gene-LDO38_RS19510;Name=LDO38_RS19510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19510;old_locus_tag=BVI2075_520011 NZ_CAJZAL010000155.1 Protein Homology CDS 10826 11002 . - 0 ID=cds-WP_011880711.1;Parent=gene-LDO38_RS19510;Dbxref=GenBank:WP_011880711.1;Name=WP_011880711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880711.1;locus_tag=LDO38_RS19510;product=hypothetical protein;protein_id=WP_011880711.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 11033 11479 . - . ID=gene-LDO38_RS19515;Name=LDO38_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19515;old_locus_tag=BVI2075_520012 NZ_CAJZAL010000155.1 Protein Homology CDS 11033 11479 . - 0 ID=cds-WP_011880710.1;Parent=gene-LDO38_RS19515;Dbxref=GenBank:WP_011880710.1;Name=WP_011880710.1;Ontology_term=GO:0016531;gbkey=CDS;go_function=copper chaperone activity|0016531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366652.1;locus_tag=LDO38_RS19515;product=copper chaperone PCu(A)C;protein_id=WP_011880710.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 11532 11897 . - . ID=gene-LDO38_RS19520;Name=copC;gbkey=Gene;gene=copC;gene_biotype=protein_coding;locus_tag=LDO38_RS19520 NZ_CAJZAL010000155.1 Protein Homology CDS 11532 11897 . - 0 ID=cds-WP_011880709.1;Parent=gene-LDO38_RS19520;Dbxref=GenBank:WP_011880709.1;Name=WP_011880709.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507,GO:0042597;gbkey=CDS;gene=copC;go_component=periplasmic space|0042597||IEA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354302.1;locus_tag=LDO38_RS19520;product=copper homeostasis periplasmic binding protein CopC;protein_id=WP_011880709.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 12115 12492 . - . ID=gene-LDO38_RS19525;Name=LDO38_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19525;old_locus_tag=BVI2075_520014 NZ_CAJZAL010000155.1 Protein Homology CDS 12115 12492 . - 0 ID=cds-WP_034195468.1;Parent=gene-LDO38_RS19525;Dbxref=GenBank:WP_034195468.1;Name=WP_034195468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659386.1;locus_tag=LDO38_RS19525;product=DUF2946 domain-containing protein;protein_id=WP_034195468.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 12587 12889 . - . ID=gene-LDO38_RS19530;Name=LDO38_RS19530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19530;old_locus_tag=BVI2075_520015 NZ_CAJZAL010000155.1 Protein Homology CDS 12587 12889 . - 0 ID=cds-WP_034195467.1;Parent=gene-LDO38_RS19530;Dbxref=GenBank:WP_034195467.1;Name=WP_034195467.1;Ontology_term=GO:0009055,GO:0051537;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486753.1;locus_tag=LDO38_RS19530;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_034195467.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 12988 14886 . - . ID=gene-LDO38_RS19535;Name=LDO38_RS19535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19535;old_locus_tag=BVI2075_520016 NZ_CAJZAL010000155.1 Protein Homology CDS 12988 14886 . - 0 ID=cds-WP_069246430.1;Parent=gene-LDO38_RS19535;Dbxref=GenBank:WP_069246430.1;Name=WP_069246430.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749465.1;locus_tag=LDO38_RS19535;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_069246430.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 15111 15386 . + . ID=gene-LDO38_RS30205;Name=LDO38_RS30205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30205;old_locus_tag=BVI2075_520017 NZ_CAJZAL010000155.1 Protein Homology CDS 15111 15386 . + 0 ID=cds-WP_226184110.1;Parent=gene-LDO38_RS30205;Dbxref=GenBank:WP_226184110.1;Name=WP_226184110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396459.1;locus_tag=LDO38_RS30205;product=DUF2964 family protein;protein_id=WP_226184110.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 15629 15916 . + . ID=gene-LDO38_RS19545;Name=LDO38_RS19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19545;old_locus_tag=BVI2075_520018 NZ_CAJZAL010000155.1 Protein Homology CDS 15629 15916 . + 0 ID=cds-WP_011880704.1;Parent=gene-LDO38_RS19545;Dbxref=GenBank:WP_011880704.1;Name=WP_011880704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027738.1;locus_tag=LDO38_RS19545;product=DUF1488 domain-containing protein;protein_id=WP_011880704.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 16068 16931 . - . ID=gene-LDO38_RS19550;Name=LDO38_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19550;old_locus_tag=BVI2075_520019 NZ_CAJZAL010000155.1 Protein Homology CDS 16068 16931 . - 0 ID=cds-WP_011880703.1;Parent=gene-LDO38_RS19550;Dbxref=GenBank:WP_011880703.1;Name=WP_011880703.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880703.1;locus_tag=LDO38_RS19550;product=MBL fold metallo-hydrolase;protein_id=WP_011880703.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 16934 17260 . - . ID=gene-LDO38_RS19555;Name=LDO38_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19555;old_locus_tag=BVI2075_520020 NZ_CAJZAL010000155.1 Protein Homology CDS 16934 17260 . - 0 ID=cds-WP_060122692.1;Parent=gene-LDO38_RS19555;Dbxref=GenBank:WP_060122692.1;Name=WP_060122692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659379.1;locus_tag=LDO38_RS19555;product=hypothetical protein;protein_id=WP_060122692.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 17273 17812 . - . ID=gene-LDO38_RS19560;Name=LDO38_RS19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19560;old_locus_tag=BVI2075_520021 NZ_CAJZAL010000155.1 Protein Homology CDS 17273 17812 . - 0 ID=cds-WP_011880701.1;Parent=gene-LDO38_RS19560;Dbxref=GenBank:WP_011880701.1;Name=WP_011880701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880701.1;locus_tag=LDO38_RS19560;product=hypothetical protein;protein_id=WP_011880701.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 18003 18854 . + . ID=gene-LDO38_RS19565;Name=LDO38_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19565;old_locus_tag=BVI2075_520022 NZ_CAJZAL010000155.1 Protein Homology CDS 18003 18854 . + 0 ID=cds-WP_059607089.1;Parent=gene-LDO38_RS19565;Dbxref=GenBank:WP_059607089.1;Name=WP_059607089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366643.1;locus_tag=LDO38_RS19565;product=LysR substrate-binding domain-containing protein;protein_id=WP_059607089.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 18946 20247 . - . ID=gene-LDO38_RS19570;Name=LDO38_RS19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19570;old_locus_tag=BVI2075_520023 NZ_CAJZAL010000155.1 Protein Homology CDS 18946 20247 . - 0 ID=cds-WP_011880699.1;Parent=gene-LDO38_RS19570;Dbxref=GenBank:WP_011880699.1;Name=WP_011880699.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009897941.1;locus_tag=LDO38_RS19570;product=NCS2 family permease;protein_id=WP_011880699.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 20938 21216 . + . ID=gene-LDO38_RS19575;Name=LDO38_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19575;old_locus_tag=BVI2075_520025 NZ_CAJZAL010000155.1 Protein Homology CDS 20938 21216 . + 0 ID=cds-WP_011880698.1;Parent=gene-LDO38_RS19575;Dbxref=GenBank:WP_011880698.1;Name=WP_011880698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880698.1;locus_tag=LDO38_RS19575;product=hypothetical protein;protein_id=WP_011880698.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 21380 21754 . - . ID=gene-LDO38_RS19580;Name=LDO38_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19580;old_locus_tag=BVI2075_520026 NZ_CAJZAL010000155.1 Protein Homology CDS 21380 21754 . - 0 ID=cds-WP_059739105.1;Parent=gene-LDO38_RS19580;Dbxref=GenBank:WP_059739105.1;Name=WP_059739105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723916.1;locus_tag=LDO38_RS19580;product=DUF2917 domain-containing protein;protein_id=WP_059739105.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 22005 22292 . - . ID=gene-LDO38_RS19585;Name=LDO38_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19585;old_locus_tag=BVI2075_520027 NZ_CAJZAL010000155.1 Protein Homology CDS 22005 22292 . - 0 ID=cds-WP_011880696.1;Parent=gene-LDO38_RS19585;Dbxref=GenBank:WP_011880696.1;Name=WP_011880696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396466.1;locus_tag=LDO38_RS19585;product=hypothetical protein;protein_id=WP_011880696.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 22796 24073 . + . ID=gene-LDO38_RS19590;Name=LDO38_RS19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19590;old_locus_tag=BVI2075_520028 NZ_CAJZAL010000155.1 Protein Homology CDS 22796 24073 . + 0 ID=cds-WP_069246431.1;Parent=gene-LDO38_RS19590;Dbxref=GenBank:WP_069246431.1;Name=WP_069246431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659370.1;locus_tag=LDO38_RS19590;product=haloacid dehalogenase-like hydrolase;protein_id=WP_069246431.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 24134 24907 . - . ID=gene-LDO38_RS19595;Name=LDO38_RS19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19595;old_locus_tag=BVI2075_520029 NZ_CAJZAL010000155.1 Protein Homology CDS 24134 24907 . - 0 ID=cds-WP_011880694.1;Parent=gene-LDO38_RS19595;Dbxref=GenBank:WP_011880694.1;Name=WP_011880694.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483242.1;locus_tag=LDO38_RS19595;product=slipin family protein;protein_id=WP_011880694.1;transl_table=11 NZ_CAJZAL010000155.1 RefSeq gene 24904 26196 . - . ID=gene-LDO38_RS19600;Name=LDO38_RS19600;end_range=26196,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19600;old_locus_tag=BVI2075_520030;partial=true NZ_CAJZAL010000155.1 Protein Homology CDS 24904 26196 . - 0 ID=cds-WP_435520960.1;Parent=gene-LDO38_RS19600;Dbxref=GenBank:WP_435520960.1;Name=WP_435520960.1;Ontology_term=GO:0005886,GO:0016020;end_range=26196,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493499.1;locus_tag=LDO38_RS19600;partial=true;product=NfeD family protein;protein_id=WP_435520960.1;transl_table=11 ##sequence-region NZ_CAJZAL010000156.1 1 126208 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000156.1 RefSeq region 1 126208 . + . ID=NZ_CAJZAL010000156.1:1..126208;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_53 NZ_CAJZAL010000156.1 RefSeq gene 1 230 . + . ID=gene-LDO38_RS19605;Name=LDO38_RS19605;end_range=230,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19605;old_locus_tag=BVI2075_530001;partial=true;start_range=.,1 NZ_CAJZAL010000156.1 Protein Homology CDS 1 230 . + 0 ID=cds-WP_224056587.1;Parent=gene-LDO38_RS19605;Dbxref=GenBank:WP_224056587.1;Name=WP_224056587.1;end_range=230,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012371993.1;locus_tag=LDO38_RS19605;partial=true;product=amidohydrolase family protein;protein_id=WP_224056587.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq pseudogene 312 392 . + . ID=gene-LDO38_RS30585;Name=LDO38_RS30585;end_range=392,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30585;old_locus_tag=BVI2075_530002;partial=true;pseudo=true NZ_CAJZAL010000156.1 Protein Homology CDS 312 392 . + 0 ID=cds-LDO38_RS30585;Parent=gene-LDO38_RS30585;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=392,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545673.1;locus_tag=LDO38_RS30585;partial=true;product=phosphohydrolase;pseudo=true;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 403 932 . + . ID=gene-LDO38_RS19610;Name=LDO38_RS19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19610;old_locus_tag=BVI2075_530003;partial=true;start_range=.,403 NZ_CAJZAL010000156.1 Protein Homology CDS 403 932 . + 2 ID=cds-WP_435520961.1;Parent=gene-LDO38_RS19610;Dbxref=GenBank:WP_435520961.1;Name=WP_435520961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880445.1;locus_tag=LDO38_RS19610;partial=true;product=phosphohydrolase;protein_id=WP_435520961.1;start_range=.,403;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 1021 2133 . - . ID=gene-LDO38_RS19615;Name=LDO38_RS19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19615;old_locus_tag=BVI2075_530004 NZ_CAJZAL010000156.1 Protein Homology CDS 1021 2133 . - 0 ID=cds-WP_034193610.1;Parent=gene-LDO38_RS19615;Dbxref=GenBank:WP_034193610.1;Name=WP_034193610.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726105.1;locus_tag=LDO38_RS19615;product=alkene reductase;protein_id=WP_034193610.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 2180 3397 . - . ID=gene-LDO38_RS19620;Name=LDO38_RS19620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19620;old_locus_tag=BVI2075_530005 NZ_CAJZAL010000156.1 Protein Homology CDS 2180 3397 . - 0 ID=cds-WP_011880443.1;Parent=gene-LDO38_RS19620;Dbxref=GenBank:WP_011880443.1;Name=WP_011880443.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545671.1;locus_tag=LDO38_RS19620;product=MFS transporter;protein_id=WP_011880443.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 3579 4496 . - . ID=gene-LDO38_RS19625;Name=LDO38_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19625;old_locus_tag=BVI2075_530006 NZ_CAJZAL010000156.1 Protein Homology CDS 3579 4496 . - 0 ID=cds-WP_014726104.1;Parent=gene-LDO38_RS19625;Dbxref=GenBank:WP_014726104.1;Name=WP_014726104.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100311.1;locus_tag=LDO38_RS19625;product=LysR family transcriptional regulator;protein_id=WP_014726104.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 4582 6843 . - . ID=gene-LDO38_RS19630;Name=LDO38_RS19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19630;old_locus_tag=BVI2075_530007 NZ_CAJZAL010000156.1 Protein Homology CDS 4582 6843 . - 0 ID=cds-WP_224056588.1;Parent=gene-LDO38_RS19630;Dbxref=GenBank:WP_224056588.1;Name=WP_224056588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880441.1;locus_tag=LDO38_RS19630;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;protein_id=WP_224056588.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 6843 7343 . - . ID=gene-LDO38_RS19635;Name=LDO38_RS19635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19635;old_locus_tag=BVI2075_530008 NZ_CAJZAL010000156.1 Protein Homology CDS 6843 7343 . - 0 ID=cds-WP_011880440.1;Parent=gene-LDO38_RS19635;Dbxref=GenBank:WP_011880440.1;Name=WP_011880440.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498476.1;locus_tag=LDO38_RS19635;product=(2Fe-2S)-binding protein;protein_id=WP_011880440.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 7340 8626 . - . ID=gene-LDO38_RS19640;Name=LDO38_RS19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19640;old_locus_tag=BVI2075_530009 NZ_CAJZAL010000156.1 Protein Homology CDS 7340 8626 . - 0 ID=cds-WP_011880439.1;Parent=gene-LDO38_RS19640;Dbxref=GenBank:WP_011880439.1;Name=WP_011880439.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481364.1;locus_tag=LDO38_RS19640;product=c-type cytochrome;protein_id=WP_011880439.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 8887 10017 . - . ID=gene-LDO38_RS19645;Name=LDO38_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19645;old_locus_tag=BVI2075_530010 NZ_CAJZAL010000156.1 Protein Homology CDS 8887 10017 . - 0 ID=cds-WP_176327129.1;Parent=gene-LDO38_RS19645;Dbxref=GenBank:WP_176327129.1;Name=WP_176327129.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726102.1;locus_tag=LDO38_RS19645;product=amidohydrolase family protein;protein_id=WP_176327129.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 10014 11687 . - . ID=gene-LDO38_RS19650;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=LDO38_RS19650;old_locus_tag=BVI2075_530011 NZ_CAJZAL010000156.1 Protein Homology CDS 10014 11687 . - 0 ID=cds-WP_034193605.1;Parent=gene-LDO38_RS19650;Dbxref=GenBank:WP_034193605.1;Name=WP_034193605.1;gbkey=CDS;gene=actP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726101.1;locus_tag=LDO38_RS19650;product=cation/acetate symporter ActP;protein_id=WP_034193605.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 11684 12043 . - . ID=gene-LDO38_RS19655;Name=LDO38_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19655;old_locus_tag=BVI2075_530012 NZ_CAJZAL010000156.1 Protein Homology CDS 11684 12043 . - 0 ID=cds-WP_014726100.1;Parent=gene-LDO38_RS19655;Dbxref=GenBank:WP_014726100.1;Name=WP_014726100.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726100.1;locus_tag=LDO38_RS19655;product=DUF485 domain-containing protein;protein_id=WP_014726100.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 12108 13334 . - . ID=gene-LDO38_RS19660;Name=LDO38_RS19660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19660;old_locus_tag=BVI2075_530013 NZ_CAJZAL010000156.1 Protein Homology CDS 12108 13334 . - 0 ID=cds-WP_014726099.1;Parent=gene-LDO38_RS19660;Dbxref=GenBank:WP_014726099.1;Name=WP_014726099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726099.1;locus_tag=LDO38_RS19660;product=FAD binding domain-containing protein;protein_id=WP_014726099.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 13336 13809 . - . ID=gene-LDO38_RS19665;Name=LDO38_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19665;old_locus_tag=BVI2075_530014 NZ_CAJZAL010000156.1 Protein Homology CDS 13336 13809 . - 0 ID=cds-WP_011880434.1;Parent=gene-LDO38_RS19665;Dbxref=GenBank:WP_011880434.1;Name=WP_011880434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880434.1;locus_tag=LDO38_RS19665;product=VOC family protein;protein_id=WP_011880434.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 13971 14396 . - . ID=gene-LDO38_RS19670;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=LDO38_RS19670;old_locus_tag=BVI2075_530015 NZ_CAJZAL010000156.1 Protein Homology CDS 13971 14396 . - 0 ID=cds-WP_059605183.1;Parent=gene-LDO38_RS19670;Dbxref=GenBank:WP_059605183.1;Name=WP_059605183.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726098.1;locus_tag=LDO38_RS19670;product=type VI secretion system baseplate subunit TssE;protein_id=WP_059605183.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 14412 17135 . - . ID=gene-LDO38_RS19675;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=LDO38_RS19675;old_locus_tag=BVI2075_530016 NZ_CAJZAL010000156.1 Protein Homology CDS 14412 17135 . - 0 ID=cds-WP_212167556.1;Parent=gene-LDO38_RS19675;Dbxref=GenBank:WP_212167556.1;Name=WP_212167556.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726097.1;locus_tag=LDO38_RS19675;product=type VI secretion system ATPase TssH;protein_id=WP_212167556.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 17274 17759 . - . ID=gene-LDO38_RS19680;Name=LDO38_RS19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19680;old_locus_tag=BVI2075_530017 NZ_CAJZAL010000156.1 Protein Homology CDS 17274 17759 . - 0 ID=cds-WP_014726096.1;Parent=gene-LDO38_RS19680;Dbxref=GenBank:WP_014726096.1;Name=WP_014726096.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007587801.1;locus_tag=LDO38_RS19680;product=Hcp family type VI secretion system effector;protein_id=WP_014726096.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 17857 19578 . - . ID=gene-LDO38_RS19685;Name=LDO38_RS19685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19685;old_locus_tag=BVI2075_530018 NZ_CAJZAL010000156.1 Protein Homology CDS 17857 19578 . - 0 ID=cds-WP_224056589.1;Parent=gene-LDO38_RS19685;Dbxref=GenBank:WP_224056589.1;Name=WP_224056589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726095.1;locus_tag=LDO38_RS19685;product=OmpA family protein;protein_id=WP_224056589.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 19575 20306 . - . ID=gene-LDO38_RS19690;Name=LDO38_RS19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19690;old_locus_tag=BVI2075_530019 NZ_CAJZAL010000156.1 Protein Homology CDS 19575 20306 . - 0 ID=cds-WP_014726094.1;Parent=gene-LDO38_RS19690;Dbxref=GenBank:WP_014726094.1;Name=WP_014726094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013092074.1;locus_tag=LDO38_RS19690;product=DotU family type IV/VI secretion system protein;protein_id=WP_014726094.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 20303 21655 . - . ID=gene-LDO38_RS19695;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=LDO38_RS19695;old_locus_tag=BVI2075_530020 NZ_CAJZAL010000156.1 Protein Homology CDS 20303 21655 . - 0 ID=cds-WP_212172497.1;Parent=gene-LDO38_RS19695;Dbxref=GenBank:WP_212172497.1;Name=WP_212172497.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765961.1;locus_tag=LDO38_RS19695;product=type VI secretion system baseplate subunit TssK;protein_id=WP_212172497.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 22250 22762 . + . ID=gene-LDO38_RS19700;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=LDO38_RS19700;old_locus_tag=BVI2075_530021 NZ_CAJZAL010000156.1 Protein Homology CDS 22250 22762 . + 0 ID=cds-WP_014726092.1;Parent=gene-LDO38_RS19700;Dbxref=GenBank:WP_014726092.1;Name=WP_014726092.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018434326.1;locus_tag=LDO38_RS19700;product=type VI secretion system contractile sheath small subunit;protein_id=WP_014726092.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 22836 24368 . + . ID=gene-LDO38_RS19705;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=LDO38_RS19705;old_locus_tag=BVI2075_530022 NZ_CAJZAL010000156.1 Protein Homology CDS 22836 24368 . + 0 ID=cds-WP_014726091.1;Parent=gene-LDO38_RS19705;Dbxref=GenBank:WP_014726091.1;Name=WP_014726091.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726091.1;locus_tag=LDO38_RS19705;product=type VI secretion system contractile sheath large subunit;protein_id=WP_014726091.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 24452 26803 . + . ID=gene-LDO38_RS19710;Name=LDO38_RS19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19710;old_locus_tag=BVI2075_530023 NZ_CAJZAL010000156.1 Protein Homology CDS 24452 26803 . + 0 ID=cds-WP_224056590.1;Parent=gene-LDO38_RS19710;Dbxref=GenBank:WP_224056590.1;Name=WP_224056590.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733083.1;locus_tag=LDO38_RS19710;product=type VI secretion system Vgr family protein;protein_id=WP_224056590.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 26814 27731 . + . ID=gene-LDO38_RS19715;Name=LDO38_RS19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19715;old_locus_tag=BVI2075_530024 NZ_CAJZAL010000156.1 Protein Homology CDS 26814 27731 . + 0 ID=cds-WP_059740251.1;Parent=gene-LDO38_RS19715;Dbxref=GenBank:WP_059740251.1;Name=WP_059740251.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024894.6;locus_tag=LDO38_RS19715;product=DUF4123 domain-containing protein;protein_id=WP_059740251.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 27753 28205 . + . ID=gene-LDO38_RS19720;Name=LDO38_RS19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19720;old_locus_tag=BVI2075_530025 NZ_CAJZAL010000156.1 Protein Homology CDS 27753 28205 . + 0 ID=cds-WP_175899573.1;Parent=gene-LDO38_RS19720;Dbxref=GenBank:WP_175899573.1;Name=WP_175899573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365228.1;locus_tag=LDO38_RS19720;product=DUF3304 domain-containing protein;protein_id=WP_175899573.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 28157 28663 . + . ID=gene-LDO38_RS19725;Name=LDO38_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19725;old_locus_tag=BVI2075_530026 NZ_CAJZAL010000156.1 Protein Homology CDS 28157 28663 . + 0 ID=cds-WP_224056591.1;Parent=gene-LDO38_RS19725;Dbxref=GenBank:WP_224056591.1;Name=WP_224056591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365230.1;locus_tag=LDO38_RS19725;product=DUF3304 domain-containing protein;protein_id=WP_224056591.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 28675 30774 . + . ID=gene-LDO38_RS19730;Name=LDO38_RS19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19730;old_locus_tag=BVI2075_530027 NZ_CAJZAL010000156.1 Protein Homology CDS 28675 30774 . + 0 ID=cds-WP_212181123.1;Parent=gene-LDO38_RS19730;Dbxref=GenBank:WP_212181123.1;Name=WP_212181123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479879.1;locus_tag=LDO38_RS19730;product=phospholipase effector Tle1 domain-containing protein;protein_id=WP_212181123.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 30778 31026 . + . ID=gene-LDO38_RS19735;Name=LDO38_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19735;old_locus_tag=BVI2075_530028 NZ_CAJZAL010000156.1 Protein Homology CDS 30778 31026 . + 0 ID=cds-WP_059740240.1;Parent=gene-LDO38_RS19735;Dbxref=GenBank:WP_059740240.1;Name=WP_059740240.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750262.1;locus_tag=LDO38_RS19735;product=PAAR domain-containing protein;protein_id=WP_059740240.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 31130 32281 . + . ID=gene-LDO38_RS19740;Name=LDO38_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19740;old_locus_tag=BVI2075_530029 NZ_CAJZAL010000156.1 Protein Homology CDS 31130 32281 . + 0 ID=cds-WP_224056613.1;Parent=gene-LDO38_RS19740;Dbxref=GenBank:WP_224056613.1;Name=WP_224056613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750261.1;locus_tag=LDO38_RS19740;product=hypothetical protein;protein_id=WP_224056613.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 32278 35808 . + . ID=gene-LDO38_RS19745;Name=LDO38_RS19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19745;old_locus_tag=BVI2075_530030 NZ_CAJZAL010000156.1 Protein Homology CDS 32278 35808 . + 0 ID=cds-WP_224056592.1;Parent=gene-LDO38_RS19745;Dbxref=GenBank:WP_224056592.1;Name=WP_224056592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733879.1;locus_tag=LDO38_RS19745;product=ImcF-related family protein;protein_id=WP_224056592.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 35805 37385 . + . ID=gene-LDO38_RS19750;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=LDO38_RS19750;old_locus_tag=BVI2075_530031 NZ_CAJZAL010000156.1 Protein Homology CDS 35805 37385 . + 0 ID=cds-WP_224056593.1;Parent=gene-LDO38_RS19750;Dbxref=GenBank:WP_224056593.1;Name=WP_224056593.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424034.1;locus_tag=LDO38_RS19750;product=type VI secretion system protein TssA;protein_id=WP_224056593.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 37397 39211 . + . ID=gene-LDO38_RS19755;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LDO38_RS19755;old_locus_tag=BVI2075_530032 NZ_CAJZAL010000156.1 Protein Homology CDS 37397 39211 . + 0 ID=cds-WP_224056594.1;Parent=gene-LDO38_RS19755;Dbxref=GenBank:WP_224056594.1;Name=WP_224056594.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750258.1;locus_tag=LDO38_RS19755;product=type VI secretion system baseplate subunit TssF;protein_id=WP_224056594.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 39208 40305 . + . ID=gene-LDO38_RS19760;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=LDO38_RS19760;old_locus_tag=BVI2075_530033 NZ_CAJZAL010000156.1 Protein Homology CDS 39208 40305 . + 0 ID=cds-WP_059696856.1;Parent=gene-LDO38_RS19760;Dbxref=GenBank:WP_059696856.1;Name=WP_059696856.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726084.1;locus_tag=LDO38_RS19760;product=type VI secretion system baseplate subunit TssG;protein_id=WP_059696856.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 40387 40917 . + . ID=gene-LDO38_RS19765;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=LDO38_RS19765;old_locus_tag=BVI2075_530034 NZ_CAJZAL010000156.1 Protein Homology CDS 40387 40917 . + 0 ID=cds-WP_224056595.1;Parent=gene-LDO38_RS19765;Dbxref=GenBank:WP_224056595.1;Name=WP_224056595.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726083.1;locus_tag=LDO38_RS19765;product=type VI secretion system lipoprotein TssJ;protein_id=WP_224056595.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 40934 41122 . - . ID=gene-LDO38_RS19770;Name=LDO38_RS19770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19770;old_locus_tag=BVI2075_530035 NZ_CAJZAL010000156.1 Protein Homology CDS 40934 41122 . - 0 ID=cds-WP_085954529.1;Parent=gene-LDO38_RS19770;Dbxref=GenBank:WP_085954529.1;Name=WP_085954529.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF025063.6;locus_tag=LDO38_RS19770;product=integrase core domain-containing protein;protein_id=WP_085954529.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 41071 41421 . - . ID=gene-LDO38_RS30590;Name=LDO38_RS30590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30590;old_locus_tag=BVI2075_530036 NZ_CAJZAL010000156.1 Protein Homology CDS 41071 41421 . - 0 ID=cds-WP_014726082.1;Parent=gene-LDO38_RS30590;Dbxref=GenBank:WP_014726082.1;Name=WP_014726082.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF025063.6;locus_tag=LDO38_RS30590;product=integrase core domain-containing protein;protein_id=WP_014726082.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq pseudogene 41603 43964 . + . ID=gene-LDO38_RS19775;Name=LDO38_RS19775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS19775;old_locus_tag=BVI2075_530038;pseudo=true NZ_CAJZAL010000156.1 Protein Homology CDS 41603 43964 . + 0 ID=cds-LDO38_RS19775;Parent=gene-LDO38_RS19775;Note=frameshifted;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094714.1;locus_tag=LDO38_RS19775;product=type VI secretion system Vgr family protein;pseudo=true;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 44039 46327 . + . ID=gene-LDO38_RS19780;Name=LDO38_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19780;old_locus_tag=BVI2075_530039 NZ_CAJZAL010000156.1 Protein Homology CDS 44039 46327 . + 0 ID=cds-WP_224056596.1;Parent=gene-LDO38_RS19780;Dbxref=GenBank:WP_224056596.1;Name=WP_224056596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726081.1;locus_tag=LDO38_RS19780;product=M23 family metallopeptidase;protein_id=WP_224056596.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 46347 46883 . + . ID=gene-LDO38_RS19785;Name=LDO38_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19785;old_locus_tag=BVI2075_530040 NZ_CAJZAL010000156.1 GeneMarkS-2+ CDS 46347 46883 . + 0 ID=cds-WP_224056597.1;Parent=gene-LDO38_RS19785;Dbxref=GenBank:WP_224056597.1;Name=WP_224056597.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS19785;product=hypothetical protein;protein_id=WP_224056597.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 47001 47339 . + . ID=gene-LDO38_RS19790;Name=LDO38_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19790;old_locus_tag=BVI2075_530041 NZ_CAJZAL010000156.1 GeneMarkS-2+ CDS 47001 47339 . + 0 ID=cds-WP_224056598.1;Parent=gene-LDO38_RS19790;Dbxref=GenBank:WP_224056598.1;Name=WP_224056598.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS19790;product=hypothetical protein;protein_id=WP_224056598.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 47578 47838 . + . ID=gene-LDO38_RS19795;Name=LDO38_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19795;old_locus_tag=BVI2075_530044 NZ_CAJZAL010000156.1 Protein Homology CDS 47578 47838 . + 0 ID=cds-WP_083854929.1;Parent=gene-LDO38_RS19795;Dbxref=GenBank:WP_083854929.1;Name=WP_083854929.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733434.1;locus_tag=LDO38_RS19795;product=PAAR domain-containing protein;protein_id=WP_083854929.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 47841 49190 . + . ID=gene-LDO38_RS19800;Name=LDO38_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19800;old_locus_tag=BVI2075_530045 NZ_CAJZAL010000156.1 Protein Homology CDS 47841 49190 . + 0 ID=cds-WP_175899913.1;Parent=gene-LDO38_RS19800;Dbxref=GenBank:WP_175899913.1;Name=WP_175899913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733435.1;locus_tag=LDO38_RS19800;product=hypothetical protein;protein_id=WP_175899913.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 49300 52743 . + . ID=gene-LDO38_RS19805;Name=LDO38_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19805;old_locus_tag=BVI2075_530046 NZ_CAJZAL010000156.1 Protein Homology CDS 49300 52743 . + 0 ID=cds-WP_224056599.1;Parent=gene-LDO38_RS19805;Dbxref=GenBank:WP_224056599.1;Name=WP_224056599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017775963.1;locus_tag=LDO38_RS19805;product=ImcF-related family protein;protein_id=WP_224056599.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 52830 54650 . + . ID=gene-LDO38_RS19810;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LDO38_RS19810;old_locus_tag=BVI2075_530047 NZ_CAJZAL010000156.1 Protein Homology CDS 52830 54650 . + 0 ID=cds-WP_224056614.1;Parent=gene-LDO38_RS19810;Dbxref=GenBank:WP_224056614.1;Name=WP_224056614.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726078.1;locus_tag=LDO38_RS19810;product=type VI secretion system baseplate subunit TssF;protein_id=WP_224056614.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 54704 55183 . + . ID=gene-LDO38_RS19815;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=LDO38_RS19815;old_locus_tag=BVI2075_530048 NZ_CAJZAL010000156.1 Protein Homology CDS 54704 55183 . + 0 ID=cds-WP_224056600.1;Parent=gene-LDO38_RS19815;Dbxref=GenBank:WP_224056600.1;Name=WP_224056600.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733438.1;locus_tag=LDO38_RS19815;product=type VI secretion system lipoprotein TssJ;protein_id=WP_224056600.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 55437 56702 . + . ID=gene-LDO38_RS19820;Name=LDO38_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19820;old_locus_tag=BVI2075_530050 NZ_CAJZAL010000156.1 Protein Homology CDS 55437 56702 . + 0 ID=cds-WP_212196381.1;Parent=gene-LDO38_RS19820;Dbxref=GenBank:WP_212196381.1;Name=WP_212196381.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726076.1;locus_tag=LDO38_RS19820;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_212196381.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 56742 58175 . - . ID=gene-LDO38_RS19825;Name=LDO38_RS19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19825;old_locus_tag=BVI2075_530051 NZ_CAJZAL010000156.1 Protein Homology CDS 56742 58175 . - 0 ID=cds-WP_224056601.1;Parent=gene-LDO38_RS19825;Dbxref=GenBank:WP_224056601.1;Name=WP_224056601.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337482.1;locus_tag=LDO38_RS19825;product=efflux transporter outer membrane subunit;protein_id=WP_224056601.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 58172 58620 . - . ID=gene-LDO38_RS30595;Name=LDO38_RS30595;end_range=58620,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30595;partial=true NZ_CAJZAL010000156.1 Protein Homology CDS 58172 58620 . - 2 ID=cds-WP_435520962.1;Parent=gene-LDO38_RS30595;Dbxref=GenBank:WP_435520962.1;Name=WP_435520962.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=58620,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880431.1;locus_tag=LDO38_RS30595;partial=true;product=HlyD family secretion protein;protein_id=WP_435520962.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 58631 59164 . - . ID=gene-LDO38_RS30600;Name=LDO38_RS30600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30600;old_locus_tag=BVI2075_530053;partial=true;start_range=.,58631 NZ_CAJZAL010000156.1 Protein Homology CDS 58631 59164 . - 0 ID=cds-WP_435520963.1;Parent=gene-LDO38_RS30600;Dbxref=GenBank:WP_435520963.1;Name=WP_435520963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545665.1;locus_tag=LDO38_RS30600;partial=true;product=biotin/lipoyl-binding protein;protein_id=WP_435520963.1;start_range=.,58631;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 59248 60825 . + . ID=gene-LDO38_RS19835;Name=LDO38_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19835;old_locus_tag=BVI2075_530054 NZ_CAJZAL010000156.1 Protein Homology CDS 59248 60825 . + 0 ID=cds-WP_059456650.1;Parent=gene-LDO38_RS19835;Dbxref=GenBank:WP_059456650.1;Name=WP_059456650.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545664.1;locus_tag=LDO38_RS19835;product=MFS transporter;protein_id=WP_059456650.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 60918 61898 . - . ID=gene-LDO38_RS19840;Name=LDO38_RS19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19840;old_locus_tag=BVI2075_530055 NZ_CAJZAL010000156.1 Protein Homology CDS 60918 61898 . - 0 ID=cds-WP_011880429.1;Parent=gene-LDO38_RS19840;Dbxref=GenBank:WP_011880429.1;Name=WP_011880429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767244.1;locus_tag=LDO38_RS19840;product=alpha/beta fold hydrolase;protein_id=WP_011880429.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 62306 62731 . + . ID=gene-LDO38_RS19845;Name=LDO38_RS19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19845;old_locus_tag=BVI2075_530057 NZ_CAJZAL010000156.1 Protein Homology CDS 62306 62731 . + 0 ID=cds-WP_014726072.1;Parent=gene-LDO38_RS19845;Dbxref=GenBank:WP_014726072.1;Name=WP_014726072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337486.1;locus_tag=LDO38_RS19845;product=DUF3331 domain-containing protein;protein_id=WP_014726072.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 63050 64846 . + . ID=gene-LDO38_RS19850;Name=LDO38_RS19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19850;old_locus_tag=BVI2075_530058 NZ_CAJZAL010000156.1 Protein Homology CDS 63050 64846 . + 0 ID=cds-WP_224056602.1;Parent=gene-LDO38_RS19850;Dbxref=GenBank:WP_224056602.1;Name=WP_224056602.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726070.1;locus_tag=LDO38_RS19850;product=ATP-binding protein;protein_id=WP_224056602.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 65038 65451 . + . ID=gene-LDO38_RS19855;Name=LDO38_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19855;old_locus_tag=BVI2075_530059 NZ_CAJZAL010000156.1 Protein Homology CDS 65038 65451 . + 0 ID=cds-WP_059740356.1;Parent=gene-LDO38_RS19855;Dbxref=GenBank:WP_059740356.1;Name=WP_059740356.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498462.1;locus_tag=LDO38_RS19855;product=DoxX family protein;protein_id=WP_059740356.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 65483 65635 . + . ID=gene-LDO38_RS19860;Name=LDO38_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19860;old_locus_tag=BVI2075_530060 NZ_CAJZAL010000156.1 GeneMarkS-2+ CDS 65483 65635 . + 0 ID=cds-WP_155624700.1;Parent=gene-LDO38_RS19860;Dbxref=GenBank:WP_155624700.1;Name=WP_155624700.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS19860;product=hypothetical protein;protein_id=WP_155624700.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 65852 66760 . - . ID=gene-LDO38_RS19865;Name=LDO38_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19865;old_locus_tag=BVI2075_530061 NZ_CAJZAL010000156.1 Protein Homology CDS 65852 66760 . - 0 ID=cds-WP_014726067.1;Parent=gene-LDO38_RS19865;Dbxref=GenBank:WP_014726067.1;Name=WP_014726067.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726067.1;locus_tag=LDO38_RS19865;product=LysR family transcriptional regulator;protein_id=WP_014726067.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 67112 67927 . - . ID=gene-LDO38_RS19870;Name=LDO38_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19870;old_locus_tag=BVI2075_530063 NZ_CAJZAL010000156.1 Protein Homology CDS 67112 67927 . - 0 ID=cds-WP_176327149.1;Parent=gene-LDO38_RS19870;Dbxref=GenBank:WP_176327149.1;Name=WP_176327149.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372407.1;locus_tag=LDO38_RS19870;product=response regulator transcription factor;protein_id=WP_176327149.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 68915 72292 . + . ID=gene-LDO38_RS19875;Name=LDO38_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19875;old_locus_tag=BVI2075_530068 NZ_CAJZAL010000156.1 Protein Homology CDS 68915 72292 . + 0 ID=cds-WP_224056603.1;Parent=gene-LDO38_RS19875;Dbxref=GenBank:WP_224056603.1;Name=WP_224056603.1;Ontology_term=GO:0007155,GO:0015031;gbkey=CDS;go_process=cell adhesion|0007155||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336870.1;locus_tag=LDO38_RS19875;product=YadA family autotransporter adhesin;protein_id=WP_224056603.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 72584 73474 . + . ID=gene-LDO38_RS19880;Name=LDO38_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19880;old_locus_tag=BVI2075_530069 NZ_CAJZAL010000156.1 Protein Homology CDS 72584 73474 . + 0 ID=cds-WP_176043285.1;Parent=gene-LDO38_RS19880;Dbxref=GenBank:WP_176043285.1;Name=WP_176043285.1;Ontology_term=GO:0006865,GO:0016597,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=amino acid binding|0016597||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726062.1;locus_tag=LDO38_RS19880;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_176043285.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 73563 74954 . - . ID=gene-LDO38_RS19885;Name=LDO38_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19885;old_locus_tag=BVI2075_530070 NZ_CAJZAL010000156.1 Protein Homology CDS 73563 74954 . - 0 ID=cds-WP_224056604.1;Parent=gene-LDO38_RS19885;Dbxref=GenBank:WP_224056604.1;Name=WP_224056604.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880421.1;locus_tag=LDO38_RS19885;product=PAS domain-containing sensor histidine kinase;protein_id=WP_224056604.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 75058 75435 . + . ID=gene-LDO38_RS19890;Name=LDO38_RS19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19890;old_locus_tag=BVI2075_530071 NZ_CAJZAL010000156.1 Protein Homology CDS 75058 75435 . + 0 ID=cds-WP_224056605.1;Parent=gene-LDO38_RS19890;Dbxref=GenBank:WP_224056605.1;Name=WP_224056605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880420.1;locus_tag=LDO38_RS19890;product=hypothetical protein;protein_id=WP_224056605.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 75455 76471 . - . ID=gene-LDO38_RS19895;Name=LDO38_RS19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19895;old_locus_tag=BVI2075_530072 NZ_CAJZAL010000156.1 Protein Homology CDS 75455 76471 . - 0 ID=cds-WP_224056606.1;Parent=gene-LDO38_RS19895;Dbxref=GenBank:WP_224056606.1;Name=WP_224056606.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880419.1;locus_tag=LDO38_RS19895;product=Crp/Fnr family transcriptional regulator;protein_id=WP_224056606.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 76758 76973 . - . ID=gene-LDO38_RS19900;Name=LDO38_RS19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19900;old_locus_tag=BVI2075_530073 NZ_CAJZAL010000156.1 Protein Homology CDS 76758 76973 . - 0 ID=cds-WP_034193570.1;Parent=gene-LDO38_RS19900;Dbxref=GenBank:WP_034193570.1;Name=WP_034193570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726057.1;locus_tag=LDO38_RS19900;product=hypothetical protein;protein_id=WP_034193570.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 77533 77982 . + . ID=gene-LDO38_RS19905;Name=LDO38_RS19905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19905;old_locus_tag=BVI2075_530075 NZ_CAJZAL010000156.1 Protein Homology CDS 77533 77982 . + 0 ID=cds-WP_014726054.1;Parent=gene-LDO38_RS19905;Dbxref=GenBank:WP_014726054.1;Name=WP_014726054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372500.1;locus_tag=LDO38_RS19905;product=CBS domain-containing protein;protein_id=WP_014726054.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 78061 78525 . + . ID=gene-LDO38_RS19910;Name=LDO38_RS19910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19910;old_locus_tag=BVI2075_530076 NZ_CAJZAL010000156.1 Protein Homology CDS 78061 78525 . + 0 ID=cds-WP_045579989.1;Parent=gene-LDO38_RS19910;Dbxref=GenBank:WP_045579989.1;Name=WP_045579989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726053.1;locus_tag=LDO38_RS19910;product=hypothetical protein;protein_id=WP_045579989.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 78574 78756 . + . ID=gene-LDO38_RS19915;Name=LDO38_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19915 NZ_CAJZAL010000156.1 GeneMarkS-2+ CDS 78574 78756 . + 0 ID=cds-WP_146230240.1;Parent=gene-LDO38_RS19915;Dbxref=GenBank:WP_146230240.1;Name=WP_146230240.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS19915;product=hypothetical protein;protein_id=WP_146230240.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 79274 79738 . + . ID=gene-LDO38_RS19920;Name=LDO38_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19920;old_locus_tag=BVI2075_530078 NZ_CAJZAL010000156.1 Protein Homology CDS 79274 79738 . + 0 ID=cds-WP_014726050.1;Parent=gene-LDO38_RS19920;Dbxref=GenBank:WP_014726050.1;Name=WP_014726050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880414.1;locus_tag=LDO38_RS19920;product=hypothetical protein;protein_id=WP_014726050.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 79967 80416 . + . ID=gene-LDO38_RS19925;Name=LDO38_RS19925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19925;old_locus_tag=BVI2075_530079 NZ_CAJZAL010000156.1 Protein Homology CDS 79967 80416 . + 0 ID=cds-WP_011880413.1;Parent=gene-LDO38_RS19925;Dbxref=GenBank:WP_011880413.1;Name=WP_011880413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880413.1;locus_tag=LDO38_RS19925;product=CBS domain-containing protein;protein_id=WP_011880413.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 80456 82057 . - . ID=gene-LDO38_RS19930;Name=LDO38_RS19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19930;old_locus_tag=BVI2075_530080 NZ_CAJZAL010000156.1 Protein Homology CDS 80456 82057 . - 0 ID=cds-WP_060082014.1;Parent=gene-LDO38_RS19930;Dbxref=GenBank:WP_060082014.1;Name=WP_060082014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880412.1;locus_tag=LDO38_RS19930;product=AAA family ATPase;protein_id=WP_060082014.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 82431 82871 . + . ID=gene-LDO38_RS19935;Name=LDO38_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19935;old_locus_tag=BVI2075_530081 NZ_CAJZAL010000156.1 Protein Homology CDS 82431 82871 . + 0 ID=cds-WP_034193567.1;Parent=gene-LDO38_RS19935;Dbxref=GenBank:WP_034193567.1;Name=WP_034193567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880411.1;locus_tag=LDO38_RS19935;product=hypothetical protein;protein_id=WP_034193567.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 83003 83473 . + . ID=gene-LDO38_RS19940;Name=LDO38_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19940;old_locus_tag=BVI2075_530083 NZ_CAJZAL010000156.1 Protein Homology CDS 83003 83473 . + 0 ID=cds-WP_011880410.1;Parent=gene-LDO38_RS19940;Dbxref=GenBank:WP_011880410.1;Name=WP_011880410.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880410.1;locus_tag=LDO38_RS19940;product=universal stress protein;protein_id=WP_011880410.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 83515 83790 . + . ID=gene-LDO38_RS19945;Name=LDO38_RS19945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19945;old_locus_tag=BVI2075_530082 NZ_CAJZAL010000156.1 Protein Homology CDS 83515 83790 . + 0 ID=cds-WP_014726047.1;Parent=gene-LDO38_RS19945;Dbxref=GenBank:WP_014726047.1;Name=WP_014726047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726047.1;locus_tag=LDO38_RS19945;product=DUF1488 domain-containing protein;protein_id=WP_014726047.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 83972 84406 . + . ID=gene-LDO38_RS19950;Name=LDO38_RS19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19950;old_locus_tag=BVI2075_530084 NZ_CAJZAL010000156.1 Protein Homology CDS 83972 84406 . + 0 ID=cds-WP_034193566.1;Parent=gene-LDO38_RS19950;Dbxref=GenBank:WP_034193566.1;Name=WP_034193566.1;Ontology_term=GO:0009408,GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415428.1;locus_tag=LDO38_RS19950;product=Hsp20/alpha crystallin family protein;protein_id=WP_034193566.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 84535 85200 . - . ID=gene-LDO38_RS19955;Name=LDO38_RS19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19955;old_locus_tag=BVI2075_530085 NZ_CAJZAL010000156.1 Protein Homology CDS 84535 85200 . - 0 ID=cds-WP_175899879.1;Parent=gene-LDO38_RS19955;Dbxref=GenBank:WP_175899879.1;Name=WP_175899879.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726045.1;locus_tag=LDO38_RS19955;product=nitroreductase family protein;protein_id=WP_175899879.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 85430 86080 . + . ID=gene-LDO38_RS19960;Name=LDO38_RS19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19960;old_locus_tag=BVI2075_530086 NZ_CAJZAL010000156.1 Protein Homology CDS 85430 86080 . + 0 ID=cds-WP_045579811.1;Parent=gene-LDO38_RS19960;Dbxref=GenBank:WP_045579811.1;Name=WP_045579811.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603916.1;locus_tag=LDO38_RS19960;product=BON domain-containing protein;protein_id=WP_045579811.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 86659 87399 . - . ID=gene-LDO38_RS19965;Name=LDO38_RS19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19965;old_locus_tag=BVI2075_530088 NZ_CAJZAL010000156.1 Protein Homology CDS 86659 87399 . - 0 ID=cds-WP_034193952.1;Parent=gene-LDO38_RS19965;Dbxref=GenBank:WP_034193952.1;Name=WP_034193952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003812097.1;locus_tag=LDO38_RS19965;product=SDR family oxidoreductase;protein_id=WP_034193952.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 87396 88328 . - . ID=gene-LDO38_RS19970;Name=LDO38_RS19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19970;old_locus_tag=BVI2075_530089 NZ_CAJZAL010000156.1 Protein Homology CDS 87396 88328 . - 0 ID=cds-WP_034193951.1;Parent=gene-LDO38_RS19970;Dbxref=GenBank:WP_034193951.1;Name=WP_034193951.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726042.1;locus_tag=LDO38_RS19970;product=SDR family oxidoreductase;protein_id=WP_034193951.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 88344 89288 . - . ID=gene-LDO38_RS19975;Name=LDO38_RS19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19975;old_locus_tag=BVI2075_530090 NZ_CAJZAL010000156.1 Protein Homology CDS 88344 89288 . - 0 ID=cds-WP_319000706.1;Parent=gene-LDO38_RS19975;Dbxref=GenBank:WP_319000706.1;Name=WP_319000706.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726041.1;locus_tag=LDO38_RS19975;product=NADP-dependent oxidoreductase;protein_id=WP_319000706.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 89336 89782 . - . ID=gene-LDO38_RS19980;Name=LDO38_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19980;old_locus_tag=BVI2075_530091 NZ_CAJZAL010000156.1 Protein Homology CDS 89336 89782 . - 0 ID=cds-WP_212167500.1;Parent=gene-LDO38_RS19980;Dbxref=GenBank:WP_212167500.1;Name=WP_212167500.1;Ontology_term=GO:0030638;gbkey=CDS;go_process=polyketide metabolic process|0030638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726040.1;locus_tag=LDO38_RS19980;product=ester cyclase;protein_id=WP_212167500.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 89895 90806 . + . ID=gene-LDO38_RS19985;Name=LDO38_RS19985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19985;old_locus_tag=BVI2075_530093 NZ_CAJZAL010000156.1 Protein Homology CDS 89895 90806 . + 0 ID=cds-WP_224056607.1;Parent=gene-LDO38_RS19985;Dbxref=GenBank:WP_224056607.1;Name=WP_224056607.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726039.1;locus_tag=LDO38_RS19985;product=LysR family transcriptional regulator;protein_id=WP_224056607.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 90949 92112 . - . ID=gene-LDO38_RS19990;Name=LDO38_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19990;old_locus_tag=BVI2075_530094 NZ_CAJZAL010000156.1 Protein Homology CDS 90949 92112 . - 0 ID=cds-WP_224056615.1;Parent=gene-LDO38_RS19990;Dbxref=GenBank:WP_224056615.1;Name=WP_224056615.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004631563.1;locus_tag=LDO38_RS19990;product=GGDEF domain-containing protein;protein_id=WP_224056615.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 92515 94272 . - . ID=gene-LDO38_RS19995;Name=LDO38_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS19995;old_locus_tag=BVI2075_530096 NZ_CAJZAL010000156.1 Protein Homology CDS 92515 94272 . - 0 ID=cds-WP_014726036.1;Parent=gene-LDO38_RS19995;Dbxref=GenBank:WP_014726036.1;Name=WP_014726036.1;Ontology_term=GO:0015103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=inorganic anion transmembrane transporter activity|0015103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488350.1;locus_tag=LDO38_RS19995;product=SulP family inorganic anion transporter;protein_id=WP_014726036.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 94474 94695 . - . ID=gene-LDO38_RS20000;Name=LDO38_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20000;old_locus_tag=BVI2075_530097 NZ_CAJZAL010000156.1 Protein Homology CDS 94474 94695 . - 0 ID=cds-WP_011880401.1;Parent=gene-LDO38_RS20000;Dbxref=GenBank:WP_011880401.1;Name=WP_011880401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880401.1;locus_tag=LDO38_RS20000;product=hypothetical protein;protein_id=WP_011880401.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 94836 95876 . - . ID=gene-LDO38_RS20005;Name=LDO38_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20005;old_locus_tag=BVI2075_530098 NZ_CAJZAL010000156.1 Protein Homology CDS 94836 95876 . - 0 ID=cds-WP_155624699.1;Parent=gene-LDO38_RS20005;Dbxref=GenBank:WP_155624699.1;Name=WP_155624699.1;Ontology_term=GO:0009691,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880400.1;locus_tag=LDO38_RS20005;product=TIGR00730 family Rossman fold protein;protein_id=WP_155624699.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 95899 96234 . - . ID=gene-LDO38_RS20010;Name=LDO38_RS20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20010;old_locus_tag=BVI2075_530099 NZ_CAJZAL010000156.1 Protein Homology CDS 95899 96234 . - 0 ID=cds-WP_014726033.1;Parent=gene-LDO38_RS20010;Dbxref=GenBank:WP_014726033.1;Name=WP_014726033.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726033.1;locus_tag=LDO38_RS20010;product=c-type cytochrome;protein_id=WP_014726033.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 96254 97255 . - . ID=gene-LDO38_RS20015;Name=LDO38_RS20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20015;old_locus_tag=BVI2075_530100 NZ_CAJZAL010000156.1 Protein Homology CDS 96254 97255 . - 0 ID=cds-WP_059621894.1;Parent=gene-LDO38_RS20015;Dbxref=GenBank:WP_059621894.1;Name=WP_059621894.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726032.1;locus_tag=LDO38_RS20015;product=Acg family FMN-binding oxidoreductase;protein_id=WP_059621894.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 97432 98421 . + . ID=gene-LDO38_RS20020;Name=LDO38_RS20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20020;old_locus_tag=BVI2075_530101 NZ_CAJZAL010000156.1 Protein Homology CDS 97432 98421 . + 0 ID=cds-WP_014726031.1;Parent=gene-LDO38_RS20020;Dbxref=GenBank:WP_014726031.1;Name=WP_014726031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752861.1;locus_tag=LDO38_RS20020;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_014726031.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 98538 99311 . - . ID=gene-LDO38_RS20025;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=LDO38_RS20025;old_locus_tag=BVI2075_530102 NZ_CAJZAL010000156.1 Protein Homology CDS 98538 99311 . - 0 ID=cds-WP_014726030.1;Parent=gene-LDO38_RS20025;Dbxref=GenBank:WP_014726030.1;Name=WP_014726030.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=fnr;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488370.1;locus_tag=LDO38_RS20025;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_014726030.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 99693 100340 . - . ID=gene-LDO38_RS20030;Name=LDO38_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20030;old_locus_tag=BVI2075_530104 NZ_CAJZAL010000156.1 Protein Homology CDS 99693 100340 . - 0 ID=cds-WP_014726029.1;Parent=gene-LDO38_RS20030;Dbxref=GenBank:WP_014726029.1;Name=WP_014726029.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726029.1;locus_tag=LDO38_RS20030;product=response regulator;protein_id=WP_014726029.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 100953 101423 . + . ID=gene-LDO38_RS20035;Name=LDO38_RS20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20035;old_locus_tag=BVI2075_530106 NZ_CAJZAL010000156.1 Protein Homology CDS 100953 101423 . + 0 ID=cds-WP_011880394.1;Parent=gene-LDO38_RS20035;Dbxref=GenBank:WP_011880394.1;Name=WP_011880394.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726027.1;locus_tag=LDO38_RS20035;product=universal stress protein;protein_id=WP_011880394.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 101484 102317 . - . ID=gene-LDO38_RS20040;Name=LDO38_RS20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20040;old_locus_tag=BVI2075_530107 NZ_CAJZAL010000156.1 Protein Homology CDS 101484 102317 . - 0 ID=cds-WP_014726026.1;Parent=gene-LDO38_RS20040;Dbxref=GenBank:WP_014726026.1;Name=WP_014726026.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880393.1;locus_tag=LDO38_RS20040;product=universal stress protein;protein_id=WP_014726026.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 102314 102817 . - . ID=gene-LDO38_RS20045;Name=LDO38_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20045;old_locus_tag=BVI2075_530108 NZ_CAJZAL010000156.1 Protein Homology CDS 102314 102817 . - 0 ID=cds-WP_011880392.1;Parent=gene-LDO38_RS20045;Dbxref=GenBank:WP_011880392.1;Name=WP_011880392.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218247.1;locus_tag=LDO38_RS20045;product=universal stress protein;protein_id=WP_011880392.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 102887 104086 . - . ID=gene-LDO38_RS20050;Name=LDO38_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20050;old_locus_tag=BVI2075_530109 NZ_CAJZAL010000156.1 Protein Homology CDS 102887 104086 . - 0 ID=cds-WP_212172486.1;Parent=gene-LDO38_RS20050;Dbxref=GenBank:WP_212172486.1;Name=WP_212172486.1;Ontology_term=GO:0006082,GO:0016310,GO:0000287,GO:0005524,GO:0016301,GO:0016774;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C carboxyl group as acceptor|0016774||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658823.1;locus_tag=LDO38_RS20050;product=acetate/propionate family kinase;protein_id=WP_212172486.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 104095 104934 . - . ID=gene-LDO38_RS20055;Name=LDO38_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20055;old_locus_tag=BVI2075_530110 NZ_CAJZAL010000156.1 Protein Homology CDS 104095 104934 . - 0 ID=cds-WP_011880390.1;Parent=gene-LDO38_RS20055;Dbxref=GenBank:WP_011880390.1;Name=WP_011880390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009968117.1;locus_tag=LDO38_RS20055;product=universal stress protein;protein_id=WP_011880390.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 105123 105653 . + . ID=gene-LDO38_RS20060;Name=LDO38_RS20060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20060;old_locus_tag=BVI2075_530111 NZ_CAJZAL010000156.1 Protein Homology CDS 105123 105653 . + 0 ID=cds-WP_045579796.1;Parent=gene-LDO38_RS20060;Dbxref=GenBank:WP_045579796.1;Name=WP_045579796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726024.1;locus_tag=LDO38_RS20060;product=hypothetical protein;protein_id=WP_045579796.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 105643 106389 . + . ID=gene-LDO38_RS20065;Name=phbB;gbkey=Gene;gene=phbB;gene_biotype=protein_coding;locus_tag=LDO38_RS20065;old_locus_tag=BVI2075_530112 NZ_CAJZAL010000156.1 Protein Homology CDS 105643 106389 . + 0 ID=cds-WP_011880388.1;Parent=gene-LDO38_RS20065;Dbxref=GenBank:WP_011880388.1;Name=WP_011880388.1;Ontology_term=GO:0042619,GO:0018454,GO:0005737;gbkey=CDS;gene=phbB;go_component=cytoplasm|0005737||IEA;go_function=acetoacetyl-CoA reductase activity|0018454||IEA;go_process=poly-hydroxybutyrate biosynthetic process|0042619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726023.1;locus_tag=LDO38_RS20065;product=acetoacetyl-CoA reductase;protein_id=WP_011880388.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 106523 108337 . + . ID=gene-LDO38_RS20070;Name=LDO38_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20070;old_locus_tag=BVI2075_530113 NZ_CAJZAL010000156.1 Protein Homology CDS 106523 108337 . + 0 ID=cds-WP_059896010.1;Parent=gene-LDO38_RS20070;Dbxref=GenBank:WP_059896010.1;Name=WP_059896010.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366073.1;locus_tag=LDO38_RS20070;product=PHA/PHB synthase family protein;protein_id=WP_059896010.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 108357 109397 . + . ID=gene-LDO38_RS20075;Name=LDO38_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20075;old_locus_tag=BVI2075_530114 NZ_CAJZAL010000156.1 Protein Homology CDS 108357 109397 . + 0 ID=cds-WP_014726021.1;Parent=gene-LDO38_RS20075;Dbxref=GenBank:WP_014726021.1;Name=WP_014726021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658829.1;locus_tag=LDO38_RS20075;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_014726021.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 109612 109944 . + . ID=gene-LDO38_RS20080;Name=LDO38_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20080;old_locus_tag=BVI2075_530115 NZ_CAJZAL010000156.1 Protein Homology CDS 109612 109944 . + 0 ID=cds-WP_045577810.1;Parent=gene-LDO38_RS20080;Dbxref=GenBank:WP_045577810.1;Name=WP_045577810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365323.1;locus_tag=LDO38_RS20080;product=barstar family protein;protein_id=WP_045577810.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 110038 110835 . + . ID=gene-LDO38_RS20085;Name=LDO38_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20085;old_locus_tag=BVI2075_530116 NZ_CAJZAL010000156.1 GeneMarkS-2+ CDS 110038 110835 . + 0 ID=cds-WP_176315856.1;Parent=gene-LDO38_RS20085;Dbxref=GenBank:WP_176315856.1;Name=WP_176315856.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS20085;product=hypothetical protein;protein_id=WP_176315856.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 111190 111624 . - . ID=gene-LDO38_RS20090;Name=LDO38_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20090 NZ_CAJZAL010000156.1 Protein Homology CDS 111190 111624 . - 0 ID=cds-WP_059493352.1;Parent=gene-LDO38_RS20090;Dbxref=GenBank:WP_059493352.1;Name=WP_059493352.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691449.1;locus_tag=LDO38_RS20090;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_059493352.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 111734 112351 . + . ID=gene-LDO38_RS20095;Name=LDO38_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20095;old_locus_tag=BVI2075_530119 NZ_CAJZAL010000156.1 Protein Homology CDS 111734 112351 . + 0 ID=cds-WP_059493350.1;Parent=gene-LDO38_RS20095;Dbxref=GenBank:WP_059493350.1;Name=WP_059493350.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0016491,GO:0050136,GO:0050446;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,azobenzene reductase (NADP+) activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013343496.1;locus_tag=LDO38_RS20095;product=FMN-dependent NADH-azoreductase;protein_id=WP_059493350.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 112801 113007 . + . ID=gene-LDO38_RS20100;Name=LDO38_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20100;old_locus_tag=BVI2075_530120 NZ_CAJZAL010000156.1 GeneMarkS-2+ CDS 112801 113007 . + 0 ID=cds-WP_155623401.1;Parent=gene-LDO38_RS20100;Dbxref=GenBank:WP_155623401.1;Name=WP_155623401.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS20100;product=hypothetical protein;protein_id=WP_155623401.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 113099 116125 . + . ID=gene-LDO38_RS20105;Name=LDO38_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20105;old_locus_tag=BVI2075_530121 NZ_CAJZAL010000156.1 Protein Homology CDS 113099 116125 . + 0 ID=cds-WP_224056608.1;Parent=gene-LDO38_RS20105;Dbxref=GenBank:WP_224056608.1;Name=WP_224056608.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689773.1;locus_tag=LDO38_RS20105;product=type VI secretion system Vgr family protein;protein_id=WP_224056608.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 116129 116665 . + . ID=gene-LDO38_RS20110;Name=LDO38_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20110;old_locus_tag=BVI2075_530122 NZ_CAJZAL010000156.1 GeneMarkS-2+ CDS 116129 116665 . + 0 ID=cds-WP_059493348.1;Parent=gene-LDO38_RS20110;Dbxref=GenBank:WP_059493348.1;Name=WP_059493348.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS20110;product=hypothetical protein;protein_id=WP_059493348.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 116675 118507 . + . ID=gene-LDO38_RS20115;Name=LDO38_RS20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20115;old_locus_tag=BVI2075_530123 NZ_CAJZAL010000156.1 GeneMarkS-2+ CDS 116675 118507 . + 0 ID=cds-WP_224056609.1;Parent=gene-LDO38_RS20115;Dbxref=GenBank:WP_224056609.1;Name=WP_224056609.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS20115;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_224056609.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 118520 119125 . + . ID=gene-LDO38_RS20120;Name=LDO38_RS20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20120;old_locus_tag=BVI2075_530124 NZ_CAJZAL010000156.1 GeneMarkS-2+ CDS 118520 119125 . + 0 ID=cds-WP_155121918.1;Parent=gene-LDO38_RS20120;Dbxref=GenBank:WP_155121918.1;Name=WP_155121918.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS20120;product=hypothetical protein;protein_id=WP_155121918.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 119191 119448 . + . ID=gene-LDO38_RS20125;Name=LDO38_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20125 NZ_CAJZAL010000156.1 Protein Homology CDS 119191 119448 . + 0 ID=cds-WP_080484339.1;Parent=gene-LDO38_RS20125;Dbxref=GenBank:WP_080484339.1;Name=WP_080484339.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: protein motif:HMM:NF017315.6;locus_tag=LDO38_RS20125;product=PAAR domain-containing protein;protein_id=WP_080484339.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq pseudogene 119593 119724 . - . ID=gene-LDO38_RS20130;Name=LDO38_RS20130;end_range=119724,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS20130;partial=true;pseudo=true NZ_CAJZAL010000156.1 Protein Homology CDS 119593 119724 . - 0 ID=cds-LDO38_RS20130;Parent=gene-LDO38_RS20130;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=119724,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611734.1;locus_tag=LDO38_RS20130;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 119717 119977 . - . ID=gene-LDO38_RS30105;Name=LDO38_RS30105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30105 NZ_CAJZAL010000156.1 GeneMarkS-2+ CDS 119717 119977 . - 0 ID=cds-WP_059493344.1;Parent=gene-LDO38_RS30105;Dbxref=GenBank:WP_059493344.1;Name=WP_059493344.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30105;product=hypothetical protein;protein_id=WP_059493344.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 120572 120641 . + . ID=gene-LDO38_RS20140;Name=LDO38_RS20140;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS20140;old_locus_tag=BVI2075_TRNA9 NZ_CAJZAL010000156.1 tRNAscan-SE tRNA 120572 120641 . + . ID=rna-LDO38_RS20140;Parent=gene-LDO38_RS20140;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS20140;product=tRNA-OTHER NZ_CAJZAL010000156.1 tRNAscan-SE exon 120572 120641 . + . ID=exon-LDO38_RS20140-1;Parent=rna-LDO38_RS20140;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS20140;product=tRNA-OTHER NZ_CAJZAL010000156.1 RefSeq gene 120693 121433 . + . ID=gene-LDO38_RS20145;Name=LDO38_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20145;old_locus_tag=BVI2075_530128 NZ_CAJZAL010000156.1 GeneMarkS-2+ CDS 120693 121433 . + 0 ID=cds-WP_155624614.1;Parent=gene-LDO38_RS20145;Dbxref=GenBank:WP_155624614.1;Name=WP_155624614.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS20145;product=hypothetical protein;protein_id=WP_155624614.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 121737 122516 . - . ID=gene-LDO38_RS20150;Name=LDO38_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20150;old_locus_tag=BVI2075_530129 NZ_CAJZAL010000156.1 GeneMarkS-2+ CDS 121737 122516 . - 0 ID=cds-WP_224056610.1;Parent=gene-LDO38_RS20150;Dbxref=GenBank:WP_224056610.1;Name=WP_224056610.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS20150;product=DUF3150 domain-containing protein;protein_id=WP_224056610.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 122897 124342 . - . ID=gene-LDO38_RS20155;Name=LDO38_RS20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20155;old_locus_tag=BVI2075_530130 NZ_CAJZAL010000156.1 Protein Homology CDS 122897 124342 . - 0 ID=cds-WP_176315857.1;Parent=gene-LDO38_RS20155;Dbxref=GenBank:WP_176315857.1;Name=WP_176315857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415440.1;locus_tag=LDO38_RS20155;product=MBL fold metallo-hydrolase RNA specificity domain-containing protein;protein_id=WP_176315857.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 124628 125068 . + . ID=gene-LDO38_RS20160;Name=LDO38_RS20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20160;old_locus_tag=BVI2075_530131 NZ_CAJZAL010000156.1 Protein Homology CDS 124628 125068 . + 0 ID=cds-WP_014726018.1;Parent=gene-LDO38_RS20160;Dbxref=GenBank:WP_014726018.1;Name=WP_014726018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726018.1;locus_tag=LDO38_RS20160;product=hypothetical protein;protein_id=WP_014726018.1;transl_table=11 NZ_CAJZAL010000156.1 RefSeq gene 125113 126208 . - . ID=gene-LDO38_RS20165;Name=LDO38_RS20165;end_range=126208,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20165;old_locus_tag=BVI2075_530132;partial=true NZ_CAJZAL010000156.1 Protein Homology CDS 125113 126208 . - 1 ID=cds-WP_224056611.1;Parent=gene-LDO38_RS20165;Dbxref=GenBank:WP_224056611.1;Name=WP_224056611.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;end_range=126208,.;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218241.1;locus_tag=LDO38_RS20165;partial=true;product=efflux transporter outer membrane subunit;protein_id=WP_224056611.1;transl_table=11 ##sequence-region NZ_CAJZAL010000157.1 1 6820 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000157.1 RefSeq region 1 6820 . + . ID=NZ_CAJZAL010000157.1:1..6820;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_54 NZ_CAJZAL010000157.1 RefSeq gene 135 1293 . + . ID=gene-LDO38_RS20170;Name=LDO38_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20170;old_locus_tag=BVI2075_540002;partial=true;start_range=.,135 NZ_CAJZAL010000157.1 Protein Homology CDS 135 1293 . + 1 ID=cds-WP_435520966.1;Parent=gene-LDO38_RS20170;Dbxref=GenBank:WP_435520966.1;Name=WP_435520966.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546787.1;locus_tag=LDO38_RS20170;partial=true;product=FAD-binding oxidoreductase;protein_id=WP_435520966.1;start_range=.,135;transl_table=11 NZ_CAJZAL010000157.1 RefSeq gene 1319 1891 . - . ID=gene-LDO38_RS20175;Name=LDO38_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20175;old_locus_tag=BVI2075_540003 NZ_CAJZAL010000157.1 Protein Homology CDS 1319 1891 . - 0 ID=cds-WP_011882830.1;Parent=gene-LDO38_RS20175;Dbxref=GenBank:WP_011882830.1;Name=WP_011882830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408113.1;locus_tag=LDO38_RS20175;product=PadR family transcriptional regulator;protein_id=WP_011882830.1;transl_table=11 NZ_CAJZAL010000157.1 RefSeq gene 1960 2391 . - . ID=gene-LDO38_RS20180;Name=cadR;gbkey=Gene;gene=cadR;gene_biotype=protein_coding;locus_tag=LDO38_RS20180;old_locus_tag=BVI2075_540004 NZ_CAJZAL010000157.1 Protein Homology CDS 1960 2391 . - 0 ID=cds-WP_011882831.1;Parent=gene-LDO38_RS20180;Dbxref=GenBank:WP_011882831.1;Name=WP_011882831.1;Ontology_term=GO:0045893,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;gene=cadR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195850.1;locus_tag=LDO38_RS20180;product=Cd(II)/Pb(II)-responsive transcriptional regulator;protein_id=WP_011882831.1;transl_table=11 NZ_CAJZAL010000157.1 RefSeq gene 2473 5067 . + . ID=gene-LDO38_RS20190;Name=LDO38_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20190;old_locus_tag=BVI2075_540005 NZ_CAJZAL010000157.1 Protein Homology CDS 2473 5067 . + 0 ID=cds-WP_435520967.1;Parent=gene-LDO38_RS20190;Dbxref=GenBank:WP_435520967.1;Name=WP_435520967.1;Ontology_term=GO:0006812,GO:0042625,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled ion transmembrane transporter activity|0042625||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546784.1;locus_tag=LDO38_RS20190;product=heavy metal translocating P-type ATPase;protein_id=WP_435520967.1;transl_table=11 NZ_CAJZAL010000157.1 RefSeq pseudogene 5078 5154 . + . ID=gene-LDO38_RS30605;Name=LDO38_RS30605;end_range=5154,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30605;partial=true;pseudo=true NZ_CAJZAL010000157.1 Protein Homology CDS 5078 5154 . + 0 ID=cds-LDO38_RS30605;Parent=gene-LDO38_RS30605;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5154,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546783.1;locus_tag=LDO38_RS30605;partial=true;product=zinc ribbon domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAL010000157.1 RefSeq gene 5165 5515 . + . ID=gene-LDO38_RS20195;Name=LDO38_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20195;partial=true;start_range=.,5165 NZ_CAJZAL010000157.1 Protein Homology CDS 5165 5515 . + 0 ID=cds-WP_435520968.1;Parent=gene-LDO38_RS20195;Dbxref=GenBank:WP_435520968.1;Name=WP_435520968.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496297.1;locus_tag=LDO38_RS20195;partial=true;product=zinc ribbon domain-containing protein;protein_id=WP_435520968.1;start_range=.,5165;transl_table=11 NZ_CAJZAL010000157.1 RefSeq gene 5902 6820 . + . ID=gene-LDO38_RS20200;Name=LDO38_RS20200;end_range=6820,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20200;partial=true NZ_CAJZAL010000157.1 Protein Homology CDS 5902 6820 . + 0 ID=cds-WP_435520969.1;Parent=gene-LDO38_RS20200;Dbxref=GenBank:WP_435520969.1;Name=WP_435520969.1;end_range=6820,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401442.1;locus_tag=LDO38_RS20200;partial=true;product=mechanosensitive ion channel family protein;protein_id=WP_435520969.1;transl_table=11 ##sequence-region NZ_CAJZAL010000158.1 1 76828 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000158.1 RefSeq region 1 76828 . + . ID=NZ_CAJZAL010000158.1:1..76828;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_55 NZ_CAJZAL010000158.1 RefSeq gene 53 1330 . - . ID=gene-LDO38_RS20205;Name=LDO38_RS20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20205;old_locus_tag=BVI2075_550001 NZ_CAJZAL010000158.1 Protein Homology CDS 53 1330 . - 0 ID=cds-WP_224056617.1;Parent=gene-LDO38_RS20205;Dbxref=GenBank:WP_224056617.1;Name=WP_224056617.1;Ontology_term=GO:0009306,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752230.1;locus_tag=LDO38_RS20205;product=GspE/PulE family protein;protein_id=WP_224056617.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 1413 2699 . - . ID=gene-LDO38_RS20210;Name=LDO38_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20210;old_locus_tag=BVI2075_550002 NZ_CAJZAL010000158.1 Protein Homology CDS 1413 2699 . - 0 ID=cds-WP_181709107.1;Parent=gene-LDO38_RS20210;Dbxref=GenBank:WP_181709107.1;Name=WP_181709107.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883195.1;locus_tag=LDO38_RS20210;product=HlyC/CorC family transporter;protein_id=WP_181709107.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 3054 4499 . - . ID=gene-LDO38_RS20215;Name=LDO38_RS20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20215;old_locus_tag=BVI2075_550004 NZ_CAJZAL010000158.1 Protein Homology CDS 3054 4499 . - 0 ID=cds-WP_224056618.1;Parent=gene-LDO38_RS20215;Dbxref=GenBank:WP_224056618.1;Name=WP_224056618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883196.1;locus_tag=LDO38_RS20215;product=GSCFA domain-containing protein;protein_id=WP_224056618.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 4958 5034 . - . ID=gene-LDO38_RS20220;Name=LDO38_RS20220;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS20220;old_locus_tag=BVI2075_TRNA36 NZ_CAJZAL010000158.1 tRNAscan-SE tRNA 4958 5034 . - . ID=rna-LDO38_RS20220;Parent=gene-LDO38_RS20220;anticodon=(pos:complement(4998..5000));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS20220;product=tRNA-Pro NZ_CAJZAL010000158.1 tRNAscan-SE exon 4958 5034 . - . ID=exon-LDO38_RS20220-1;Parent=rna-LDO38_RS20220;anticodon=(pos:complement(4998..5000));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS20220;product=tRNA-Pro NZ_CAJZAL010000158.1 RefSeq gene 5186 6181 . - . ID=gene-LDO38_RS20225;Name=LDO38_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20225;old_locus_tag=BVI2075_550006 NZ_CAJZAL010000158.1 Protein Homology CDS 5186 6181 . - 0 ID=cds-WP_011883197.1;Parent=gene-LDO38_RS20225;Dbxref=GenBank:WP_011883197.1;Name=WP_011883197.1;Ontology_term=GO:0008299;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091260.1;locus_tag=LDO38_RS20225;product=polyprenyl synthetase family protein;protein_id=WP_011883197.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 6392 6703 . + . ID=gene-LDO38_RS20230;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=LDO38_RS20230;old_locus_tag=BVI2075_550007 NZ_CAJZAL010000158.1 Protein Homology CDS 6392 6703 . + 0 ID=cds-WP_006025184.1;Parent=gene-LDO38_RS20230;Dbxref=GenBank:WP_006025184.1;Name=WP_006025184.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011902040.1;locus_tag=LDO38_RS20230;product=50S ribosomal protein L21;protein_id=WP_006025184.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 6728 6991 . + . ID=gene-LDO38_RS20235;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=LDO38_RS20235;old_locus_tag=BVI2075_550008 NZ_CAJZAL010000158.1 Protein Homology CDS 6728 6991 . + 0 ID=cds-WP_006476999.1;Parent=gene-LDO38_RS20235;Dbxref=GenBank:WP_006476999.1;Name=WP_006476999.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194025.1;locus_tag=LDO38_RS20235;product=50S ribosomal protein L27;protein_id=WP_006476999.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 7177 8289 . + . ID=gene-LDO38_RS20240;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=LDO38_RS20240;old_locus_tag=BVI2075_550009 NZ_CAJZAL010000158.1 Protein Homology CDS 7177 8289 . + 0 ID=cds-WP_011883198.1;Parent=gene-LDO38_RS20240;Dbxref=GenBank:WP_011883198.1;Name=WP_011883198.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400418.1;locus_tag=LDO38_RS20240;product=Obg family GTPase CgtA;protein_id=WP_011883198.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 8379 9497 . + . ID=gene-LDO38_RS20245;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=LDO38_RS20245;old_locus_tag=BVI2075_550010 NZ_CAJZAL010000158.1 Protein Homology CDS 8379 9497 . + 0 ID=cds-WP_011883199.1;Parent=gene-LDO38_RS20245;Dbxref=GenBank:WP_011883199.1;Name=WP_011883199.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013340556.1;locus_tag=LDO38_RS20245;product=glutamate 5-kinase;protein_id=WP_011883199.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 9600 10208 . - . ID=gene-LDO38_RS20250;Name=LDO38_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20250;old_locus_tag=BVI2075_550011 NZ_CAJZAL010000158.1 Protein Homology CDS 9600 10208 . - 0 ID=cds-WP_011883200.1;Parent=gene-LDO38_RS20250;Dbxref=GenBank:WP_011883200.1;Name=WP_011883200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400416.1;locus_tag=LDO38_RS20250;product=CNP1-like family protein;protein_id=WP_011883200.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 10222 10869 . - . ID=gene-LDO38_RS20255;Name=LDO38_RS20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20255;old_locus_tag=BVI2075_550012 NZ_CAJZAL010000158.1 Protein Homology CDS 10222 10869 . - 0 ID=cds-WP_011883201.1;Parent=gene-LDO38_RS20255;Dbxref=GenBank:WP_011883201.1;Name=WP_011883201.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350862.1;locus_tag=LDO38_RS20255;product=RNA pyrophosphohydrolase;protein_id=WP_011883201.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 11086 12822 . + . ID=gene-LDO38_RS20260;Name=LDO38_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20260;old_locus_tag=BVI2075_550013 NZ_CAJZAL010000158.1 Protein Homology CDS 11086 12822 . + 0 ID=cds-WP_011883202.1;Parent=gene-LDO38_RS20260;Dbxref=GenBank:WP_011883202.1;Name=WP_011883202.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA deacylase activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400413.1;locus_tag=LDO38_RS20260;product=proline--tRNA ligase;protein_id=WP_011883202.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 12844 13446 . + . ID=gene-LDO38_RS20265;Name=LDO38_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20265;old_locus_tag=BVI2075_550014 NZ_CAJZAL010000158.1 Protein Homology CDS 12844 13446 . + 0 ID=cds-WP_011883203.1;Parent=gene-LDO38_RS20265;Dbxref=GenBank:WP_011883203.1;Name=WP_011883203.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194061.1;locus_tag=LDO38_RS20265;product=MarC family protein;protein_id=WP_011883203.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 13524 14075 . - . ID=gene-LDO38_RS20270;Name=LDO38_RS20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20270;old_locus_tag=BVI2075_550015 NZ_CAJZAL010000158.1 Protein Homology CDS 13524 14075 . - 0 ID=cds-WP_011883204.1;Parent=gene-LDO38_RS20270;Dbxref=GenBank:WP_011883204.1;Name=WP_011883204.1;Ontology_term=GO:0009116;gbkey=CDS;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025192.1;locus_tag=LDO38_RS20270;product=hypoxanthine-guanine phosphoribosyltransferase;protein_id=WP_011883204.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 14173 15540 . - . ID=gene-LDO38_RS20275;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=LDO38_RS20275;old_locus_tag=BVI2075_550016 NZ_CAJZAL010000158.1 Protein Homology CDS 14173 15540 . - 0 ID=cds-WP_011883205.1;Parent=gene-LDO38_RS20275;Dbxref=GenBank:WP_011883205.1;Name=WP_011883205.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194338.1;locus_tag=LDO38_RS20275;product=signal recognition particle protein;protein_id=WP_011883205.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 15631 16524 . + . ID=gene-LDO38_RS20280;Name=LDO38_RS20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20280;old_locus_tag=BVI2075_550017 NZ_CAJZAL010000158.1 Protein Homology CDS 15631 16524 . + 0 ID=cds-WP_011883206.1;Parent=gene-LDO38_RS20280;Dbxref=GenBank:WP_011883206.1;Name=WP_011883206.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538773.1;locus_tag=LDO38_RS20280;product=cytochrome C assembly family protein;protein_id=WP_011883206.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 16538 16834 . + . ID=gene-LDO38_RS20285;Name=LDO38_RS20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20285;old_locus_tag=BVI2075_550018 NZ_CAJZAL010000158.1 Protein Homology CDS 16538 16834 . + 0 ID=cds-WP_011883207.1;Parent=gene-LDO38_RS20285;Dbxref=GenBank:WP_011883207.1;Name=WP_011883207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491491.1;locus_tag=LDO38_RS20285;product=PP0621 family protein;protein_id=WP_011883207.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 16845 17435 . + . ID=gene-LDO38_RS20290;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=LDO38_RS20290;old_locus_tag=BVI2075_550019 NZ_CAJZAL010000158.1 Protein Homology CDS 16845 17435 . + 0 ID=cds-WP_034194192.1;Parent=gene-LDO38_RS20290;Dbxref=GenBank:WP_034194192.1;Name=WP_034194192.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025196.1;locus_tag=LDO38_RS20290;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_034194192.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 17899 20889 . + . ID=gene-LDO38_RS20295;Name=LDO38_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20295;old_locus_tag=BVI2075_550021 NZ_CAJZAL010000158.1 Protein Homology CDS 17899 20889 . + 0 ID=cds-WP_011883209.1;Parent=gene-LDO38_RS20295;Dbxref=GenBank:WP_011883209.1;Name=WP_011883209.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544523.1;locus_tag=LDO38_RS20295;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_011883209.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 21252 22463 . + . ID=gene-LDO38_RS20300;Name=LDO38_RS20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20300;old_locus_tag=BVI2075_550022 NZ_CAJZAL010000158.1 Protein Homology CDS 21252 22463 . + 0 ID=cds-WP_011883210.1;Parent=gene-LDO38_RS20300;Dbxref=GenBank:WP_011883210.1;Name=WP_011883210.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194129.1;locus_tag=LDO38_RS20300;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_011883210.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 22546 22872 . + . ID=gene-LDO38_RS20305;Name=LDO38_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20305;old_locus_tag=BVI2075_550023 NZ_CAJZAL010000158.1 Protein Homology CDS 22546 22872 . + 0 ID=cds-WP_081056201.1;Parent=gene-LDO38_RS20305;Dbxref=GenBank:WP_081056201.1;Name=WP_081056201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091277.1;locus_tag=LDO38_RS20305;product=hypothetical protein;protein_id=WP_081056201.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 22901 23602 . + . ID=gene-LDO38_RS20310;Name=LDO38_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20310;old_locus_tag=BVI2075_550024 NZ_CAJZAL010000158.1 Protein Homology CDS 22901 23602 . + 0 ID=cds-WP_011883212.1;Parent=gene-LDO38_RS20310;Dbxref=GenBank:WP_011883212.1;Name=WP_011883212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655917.1;locus_tag=LDO38_RS20310;product=histone H1-like DNA-binding protein;protein_id=WP_011883212.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 23820 24293 . - . ID=gene-LDO38_RS20315;Name=LDO38_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20315;old_locus_tag=BVI2075_550025 NZ_CAJZAL010000158.1 Protein Homology CDS 23820 24293 . - 0 ID=cds-WP_011883213.1;Parent=gene-LDO38_RS20315;Dbxref=GenBank:WP_011883213.1;Name=WP_011883213.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601283.1;locus_tag=LDO38_RS20315;product=glycine zipper 2TM domain-containing protein;protein_id=WP_011883213.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 24313 25251 . - . ID=gene-LDO38_RS20320;Name=LDO38_RS20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20320;old_locus_tag=BVI2075_550026 NZ_CAJZAL010000158.1 Protein Homology CDS 24313 25251 . - 0 ID=cds-WP_011883214.1;Parent=gene-LDO38_RS20320;Dbxref=GenBank:WP_011883214.1;Name=WP_011883214.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602176.1;locus_tag=LDO38_RS20320;product=carbohydrate kinase family protein;protein_id=WP_011883214.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 25346 25849 . - . ID=gene-LDO38_RS20325;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=LDO38_RS20325;old_locus_tag=BVI2075_550027 NZ_CAJZAL010000158.1 Protein Homology CDS 25346 25849 . - 0 ID=cds-WP_034194191.1;Parent=gene-LDO38_RS20325;Dbxref=GenBank:WP_034194191.1;Name=WP_034194191.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765230.1;locus_tag=LDO38_RS20325;product=thiol peroxidase;protein_id=WP_034194191.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 25921 27558 . - . ID=gene-LDO38_RS20330;Name=LDO38_RS20330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20330;old_locus_tag=BVI2075_550028 NZ_CAJZAL010000158.1 Protein Homology CDS 25921 27558 . - 0 ID=cds-WP_059476092.1;Parent=gene-LDO38_RS20330;Dbxref=GenBank:WP_059476092.1;Name=WP_059476092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722415.1;locus_tag=LDO38_RS20330;product=DUF3426 domain-containing protein;protein_id=WP_059476092.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 27604 28506 . - . ID=gene-LDO38_RS20335;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=LDO38_RS20335;old_locus_tag=BVI2075_550029 NZ_CAJZAL010000158.1 Protein Homology CDS 27604 28506 . - 0 ID=cds-WP_011883217.1;Parent=gene-LDO38_RS20335;Dbxref=GenBank:WP_011883217.1;Name=WP_011883217.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490720.1;locus_tag=LDO38_RS20335;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_011883217.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 28509 29876 . - . ID=gene-LDO38_RS20340;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=LDO38_RS20340;old_locus_tag=BVI2075_550030 NZ_CAJZAL010000158.1 Protein Homology CDS 28509 29876 . - 0 ID=cds-WP_011883218.1;Parent=gene-LDO38_RS20340;Dbxref=GenBank:WP_011883218.1;Name=WP_011883218.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017777083.1;locus_tag=LDO38_RS20340;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_011883218.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 29961 30434 . - . ID=gene-LDO38_RS20345;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=LDO38_RS20345;old_locus_tag=BVI2075_550031 NZ_CAJZAL010000158.1 Protein Homology CDS 29961 30434 . - 0 ID=cds-WP_011883219.1;Parent=gene-LDO38_RS20345;Dbxref=GenBank:WP_011883219.1;Name=WP_011883219.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009888964.1;locus_tag=LDO38_RS20345;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_011883219.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 30499 30951 . - . ID=gene-LDO38_RS20350;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=LDO38_RS20350;old_locus_tag=BVI2075_550032 NZ_CAJZAL010000158.1 Protein Homology CDS 30499 30951 . - 0 ID=cds-WP_034194178.1;Parent=gene-LDO38_RS20350;Dbxref=GenBank:WP_034194178.1;Name=WP_034194178.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756005.1;locus_tag=LDO38_RS20350;product=type II 3-dehydroquinate dehydratase;protein_id=WP_034194178.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 31146 31718 . - . ID=gene-LDO38_RS20355;Name=LDO38_RS20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20355;old_locus_tag=BVI2075_550033 NZ_CAJZAL010000158.1 Protein Homology CDS 31146 31718 . - 0 ID=cds-WP_059461832.1;Parent=gene-LDO38_RS20355;Dbxref=GenBank:WP_059461832.1;Name=WP_059461832.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496749.1;locus_tag=LDO38_RS20355;product=TlpA family protein disulfide reductase;protein_id=WP_059461832.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 31726 32370 . - . ID=gene-LDO38_RS20360;Name=LDO38_RS20360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20360;old_locus_tag=BVI2075_550035 NZ_CAJZAL010000158.1 Protein Homology CDS 31726 32370 . - 0 ID=cds-WP_014722418.1;Parent=gene-LDO38_RS20360;Dbxref=GenBank:WP_014722418.1;Name=WP_014722418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214153.1;locus_tag=LDO38_RS20360;product=UDP-N-acetylmuramate--alanine ligase;protein_id=WP_014722418.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 32593 33978 . + . ID=gene-LDO38_RS20365;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=LDO38_RS20365;old_locus_tag=BVI2075_550034 NZ_CAJZAL010000158.1 Protein Homology CDS 32593 33978 . + 0 ID=cds-WP_011883223.1;Parent=gene-LDO38_RS20365;Dbxref=GenBank:WP_011883223.1;Name=WP_011883223.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655924.1;locus_tag=LDO38_RS20365;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_011883223.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 33975 34544 . + . ID=gene-LDO38_RS20370;Name=LDO38_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20370;old_locus_tag=BVI2075_550036 NZ_CAJZAL010000158.1 Protein Homology CDS 33975 34544 . + 0 ID=cds-WP_011883224.1;Parent=gene-LDO38_RS20370;Dbxref=GenBank:WP_011883224.1;Name=WP_011883224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350884.1;locus_tag=LDO38_RS20370;product=YqiA/YcfP family alpha/beta fold hydrolase;protein_id=WP_011883224.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 34626 36734 . + . ID=gene-LDO38_RS20375;Name=LDO38_RS20375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20375;old_locus_tag=BVI2075_550037 NZ_CAJZAL010000158.1 Protein Homology CDS 34626 36734 . + 0 ID=cds-WP_059735994.1;Parent=gene-LDO38_RS20375;Dbxref=GenBank:WP_059735994.1;Name=WP_059735994.1;Ontology_term=GO:0003723,GO:0004540;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363053.1;locus_tag=LDO38_RS20375;product=RNB domain-containing ribonuclease;protein_id=WP_059735994.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 36731 37597 . + . ID=gene-LDO38_RS20380;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=LDO38_RS20380;old_locus_tag=BVI2075_550038 NZ_CAJZAL010000158.1 Protein Homology CDS 36731 37597 . + 0 ID=cds-WP_011883226.1;Parent=gene-LDO38_RS20380;Dbxref=GenBank:WP_011883226.1;Name=WP_011883226.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883226.1;locus_tag=LDO38_RS20380;product=shikimate dehydrogenase;protein_id=WP_011883226.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 37612 38349 . + . ID=gene-LDO38_RS20385;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=LDO38_RS20385;old_locus_tag=BVI2075_550039 NZ_CAJZAL010000158.1 Protein Homology CDS 37612 38349 . + 0 ID=cds-WP_014722419.1;Parent=gene-LDO38_RS20385;Dbxref=GenBank:WP_014722419.1;Name=WP_014722419.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350887.1;locus_tag=LDO38_RS20385;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_014722419.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 38776 40386 . + . ID=gene-LDO38_RS20390;Name=LDO38_RS20390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20390;old_locus_tag=BVI2075_550041 NZ_CAJZAL010000158.1 Protein Homology CDS 38776 40386 . + 0 ID=cds-WP_011883228.1;Parent=gene-LDO38_RS20390;Dbxref=GenBank:WP_011883228.1;Name=WP_011883228.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544540.1;locus_tag=LDO38_RS20390;product=S10 family peptidase;protein_id=WP_011883228.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 40451 40849 . + . ID=gene-LDO38_RS20395;Name=LDO38_RS20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20395;old_locus_tag=BVI2075_550042 NZ_CAJZAL010000158.1 Protein Homology CDS 40451 40849 . + 0 ID=cds-WP_014722420.1;Parent=gene-LDO38_RS20395;Dbxref=GenBank:WP_014722420.1;Name=WP_014722420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544541.1;locus_tag=LDO38_RS20395;product=EF-hand domain-containing protein;protein_id=WP_014722420.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 41183 42082 . + . ID=gene-LDO38_RS20400;Name=LDO38_RS20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20400;old_locus_tag=BVI2075_550043 NZ_CAJZAL010000158.1 Protein Homology CDS 41183 42082 . + 0 ID=cds-WP_011883231.1;Parent=gene-LDO38_RS20400;Dbxref=GenBank:WP_011883231.1;Name=WP_011883231.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755792.1;locus_tag=LDO38_RS20400;product=IclR family transcriptional regulator;protein_id=WP_011883231.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 42079 42379 . + . ID=gene-LDO38_RS30610;Name=LDO38_RS30610;end_range=42379,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30610;partial=true NZ_CAJZAL010000158.1 Protein Homology CDS 42079 42379 . + 0 ID=cds-WP_435520970.1;Parent=gene-LDO38_RS30610;Dbxref=GenBank:WP_435520970.1;Name=WP_435520970.1;Ontology_term=GO:0034194,GO:0008671;end_range=42379,.;gbkey=CDS;go_function=2-dehydro-3-deoxygalactonokinase activity|0008671||IEA;go_process=D-galactonate catabolic process|0034194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544542.1;locus_tag=LDO38_RS30610;partial=true;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_435520970.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 42390 43116 . + . ID=gene-LDO38_RS20405;Name=LDO38_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20405;old_locus_tag=BVI2075_550045;partial=true;start_range=.,42390 NZ_CAJZAL010000158.1 Protein Homology CDS 42390 43116 . + 1 ID=cds-WP_435520971.1;Parent=gene-LDO38_RS20405;Dbxref=GenBank:WP_435520971.1;Name=WP_435520971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722422.1;locus_tag=LDO38_RS20405;partial=true;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_435520971.1;start_range=.,42390;transl_table=11 NZ_CAJZAL010000158.1 RefSeq pseudogene 43130 43799 . + . ID=gene-LDO38_RS20410;Name=LDO38_RS20410;end_range=43799,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS20410;partial=true;pseudo=true NZ_CAJZAL010000158.1 Protein Homology CDS 43130 43799 . + 0 ID=cds-LDO38_RS20410;Parent=gene-LDO38_RS20410;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0034194,GO:0008674;end_range=43799,.;gbkey=CDS;go_function=2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity|0008674||IEA;go_process=D-galactonate catabolic process|0034194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333520.1;locus_tag=LDO38_RS20410;partial=true;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;pseudo=true;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 43806 44117 . + . ID=gene-LDO38_RS20415;Name=LDO38_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20415 NZ_CAJZAL010000158.1 Protein Homology CDS 43806 44117 . + 0 ID=cds-WP_435520973.1;Parent=gene-LDO38_RS20415;Dbxref=GenBank:WP_435520973.1;Name=WP_435520973.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012488.6;locus_tag=LDO38_RS20415;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_435520973.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 44145 44363 . + . ID=gene-LDO38_RS20420;Name=nifT;gbkey=Gene;gene=nifT;gene_biotype=protein_coding;locus_tag=LDO38_RS20420 NZ_CAJZAL010000158.1 Protein Homology CDS 44145 44363 . + 0 ID=cds-WP_011880134.1;Parent=gene-LDO38_RS20420;Dbxref=GenBank:WP_011880134.1;Name=WP_011880134.1;Ontology_term=GO:0009399;gbkey=CDS;gene=nifT;go_process=nitrogen fixation|0009399||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007177241.1;locus_tag=LDO38_RS20420;product=putative nitrogen fixation protein NifT;protein_id=WP_011880134.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 44365 44643 . + . ID=gene-LDO38_RS20425;Name=LDO38_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20425;old_locus_tag=BVI2075_550047 NZ_CAJZAL010000158.1 Protein Homology CDS 44365 44643 . + 0 ID=cds-WP_011880135.1;Parent=gene-LDO38_RS20425;Dbxref=GenBank:WP_011880135.1;Name=WP_011880135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880135.1;locus_tag=LDO38_RS20425;product=hypothetical protein;protein_id=WP_011880135.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 44633 45796 . + . ID=gene-LDO38_RS20430;Name=LDO38_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20430;old_locus_tag=BVI2075_550048 NZ_CAJZAL010000158.1 Protein Homology CDS 44633 45796 . + 0 ID=cds-WP_014725859.1;Parent=gene-LDO38_RS20430;Dbxref=GenBank:WP_014725859.1;Name=WP_014725859.1;Ontology_term=GO:0008483;gbkey=CDS;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018423187.1;locus_tag=LDO38_RS20430;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_014725859.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 45808 46647 . + . ID=gene-LDO38_RS20435;Name=LDO38_RS20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20435;old_locus_tag=BVI2075_550049 NZ_CAJZAL010000158.1 Protein Homology CDS 45808 46647 . + 0 ID=cds-WP_176000086.1;Parent=gene-LDO38_RS20435;Dbxref=GenBank:WP_176000086.1;Name=WP_176000086.1;Ontology_term=GO:0008270,GO:0017136,GO:0046872,GO:0070403;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,histone deacetylase activity%2C NAD-dependent|0017136||IEA,metal ion binding|0046872||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880137.1;locus_tag=LDO38_RS20435;product=SIR2 family NAD-dependent protein deacylase;protein_id=WP_176000086.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 46728 47024 . + . ID=gene-LDO38_RS20440;Name=LDO38_RS20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20440;old_locus_tag=BVI2075_550050 NZ_CAJZAL010000158.1 Protein Homology CDS 46728 47024 . + 0 ID=cds-WP_175900057.1;Parent=gene-LDO38_RS20440;Dbxref=GenBank:WP_175900057.1;Name=WP_175900057.1;Ontology_term=GO:0009055,GO:0051537;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880138.1;locus_tag=LDO38_RS20440;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_175900057.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 47139 47375 . - . ID=gene-LDO38_RS20445;Name=LDO38_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20445;old_locus_tag=BVI2075_550051 NZ_CAJZAL010000158.1 Protein Homology CDS 47139 47375 . - 0 ID=cds-WP_014725861.1;Parent=gene-LDO38_RS20445;Dbxref=GenBank:WP_014725861.1;Name=WP_014725861.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880139.1;locus_tag=LDO38_RS20445;product=FmdB family zinc ribbon protein;protein_id=WP_014725861.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 47400 47834 . - . ID=gene-LDO38_RS20450;Name=LDO38_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20450;old_locus_tag=BVI2075_550052 NZ_CAJZAL010000158.1 Protein Homology CDS 47400 47834 . - 0 ID=cds-WP_034192738.1;Parent=gene-LDO38_RS20450;Dbxref=GenBank:WP_034192738.1;Name=WP_034192738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880140.1;locus_tag=LDO38_RS20450;product=ArsC/Spx/MgsR family protein;protein_id=WP_034192738.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 47849 48616 . - . ID=gene-LDO38_RS20455;Name=LDO38_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20455;old_locus_tag=BVI2075_550053 NZ_CAJZAL010000158.1 Protein Homology CDS 47849 48616 . - 0 ID=cds-WP_059463592.1;Parent=gene-LDO38_RS20455;Dbxref=GenBank:WP_059463592.1;Name=WP_059463592.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880141.1;locus_tag=LDO38_RS20455;product=ankyrin repeat domain-containing protein;protein_id=WP_059463592.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 48613 48846 . - . ID=gene-LDO38_RS20460;Name=LDO38_RS20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20460 NZ_CAJZAL010000158.1 GeneMarkS-2+ CDS 48613 48846 . - 0 ID=cds-WP_034192736.1;Parent=gene-LDO38_RS20460;Dbxref=GenBank:WP_034192736.1;Name=WP_034192736.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS20460;product=hypothetical protein;protein_id=WP_034192736.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 48843 49385 . - . ID=gene-LDO38_RS20465;Name=LDO38_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20465;old_locus_tag=BVI2075_550054 NZ_CAJZAL010000158.1 Protein Homology CDS 48843 49385 . - 0 ID=cds-WP_014725865.1;Parent=gene-LDO38_RS20465;Dbxref=GenBank:WP_014725865.1;Name=WP_014725865.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880142.1;locus_tag=LDO38_RS20465;product=ankyrin repeat domain-containing protein;protein_id=WP_014725865.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 49530 50138 . - . ID=gene-LDO38_RS20470;Name=LDO38_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20470;old_locus_tag=BVI2075_550055 NZ_CAJZAL010000158.1 Protein Homology CDS 49530 50138 . - 0 ID=cds-WP_060122459.1;Parent=gene-LDO38_RS20470;Dbxref=GenBank:WP_060122459.1;Name=WP_060122459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725866.1;locus_tag=LDO38_RS20470;product=hypothetical protein;protein_id=WP_060122459.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 50182 50610 . - . ID=gene-LDO38_RS20475;Name=LDO38_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20475;old_locus_tag=BVI2075_550056 NZ_CAJZAL010000158.1 Protein Homology CDS 50182 50610 . - 0 ID=cds-WP_011880144.1;Parent=gene-LDO38_RS20475;Dbxref=GenBank:WP_011880144.1;Name=WP_011880144.1;Ontology_term=GO:0005344,GO:0019825,GO:0020037,GO:0046872;gbkey=CDS;go_function=oxygen carrier activity|0005344||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880144.1;locus_tag=LDO38_RS20475;product=group II truncated hemoglobin;protein_id=WP_011880144.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 50984 51865 . + . ID=gene-LDO38_RS20480;Name=nifH;gbkey=Gene;gene=nifH;gene_biotype=protein_coding;locus_tag=LDO38_RS20480;old_locus_tag=BVI2075_550057 NZ_CAJZAL010000158.1 Protein Homology CDS 50984 51865 . + 0 ID=cds-WP_011880146.1;Parent=gene-LDO38_RS20480;Dbxref=GenBank:WP_011880146.1;Name=WP_011880146.1;Ontology_term=GO:0009399,GO:0016163,GO:0016610;gbkey=CDS;gene=nifH;go_component=nitrogenase complex|0016610||IEA;go_function=nitrogenase activity|0016163||IEA;go_process=nitrogen fixation|0009399||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094509.1;locus_tag=LDO38_RS20480;product=nitrogenase iron protein;protein_id=WP_011880146.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 51948 53411 . + . ID=gene-LDO38_RS20485;Name=nifD;gbkey=Gene;gene=nifD;gene_biotype=protein_coding;locus_tag=LDO38_RS20485;old_locus_tag=BVI2075_550058 NZ_CAJZAL010000158.1 Protein Homology CDS 51948 53411 . + 0 ID=cds-WP_059561383.1;Parent=gene-LDO38_RS20485;Dbxref=GenBank:WP_059561383.1;Name=WP_059561383.1;Ontology_term=GO:0009399,GO:0016163,GO:0016612;gbkey=CDS;gene=nifD;go_component=molybdenum-iron nitrogenase complex|0016612||IEA;go_function=nitrogenase activity|0016163||IEA;go_process=nitrogen fixation|0009399||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011801729.1;locus_tag=LDO38_RS20485;product=nitrogenase molybdenum-iron protein alpha chain;protein_id=WP_059561383.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 53489 55048 . + . ID=gene-LDO38_RS20490;Name=nifK;gbkey=Gene;gene=nifK;gene_biotype=protein_coding;locus_tag=LDO38_RS20490;old_locus_tag=BVI2075_550060 NZ_CAJZAL010000158.1 Protein Homology CDS 53489 55048 . + 0 ID=cds-WP_011880148.1;Parent=gene-LDO38_RS20490;Dbxref=GenBank:WP_011880148.1;Name=WP_011880148.1;Ontology_term=GO:0009399,GO:0016163,GO:0016612;gbkey=CDS;gene=nifK;go_component=molybdenum-iron nitrogenase complex|0016612||IEA;go_function=nitrogenase activity|0016163||IEA;go_process=nitrogen fixation|0009399||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017773471.1;locus_tag=LDO38_RS20490;product=nitrogenase molybdenum-iron protein subunit beta;protein_id=WP_011880148.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 55062 55382 . + . ID=gene-LDO38_RS20495;Name=LDO38_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20495;old_locus_tag=BVI2075_550061 NZ_CAJZAL010000158.1 Protein Homology CDS 55062 55382 . + 0 ID=cds-WP_059463589.1;Parent=gene-LDO38_RS20495;Dbxref=GenBank:WP_059463589.1;Name=WP_059463589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725868.1;locus_tag=LDO38_RS20495;product=hypothetical protein;protein_id=WP_059463589.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 55655 56134 . + . ID=gene-LDO38_RS20500;Name=LDO38_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20500;old_locus_tag=BVI2075_550062 NZ_CAJZAL010000158.1 Protein Homology CDS 55655 56134 . + 0 ID=cds-WP_041494445.1;Parent=gene-LDO38_RS20500;Dbxref=GenBank:WP_041494445.1;Name=WP_041494445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880150.1;locus_tag=LDO38_RS20500;product=hypothetical protein;protein_id=WP_041494445.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 56441 57934 . + . ID=gene-LDO38_RS20505;Name=nifE;gbkey=Gene;gene=nifE;gene_biotype=protein_coding;locus_tag=LDO38_RS20505;old_locus_tag=BVI2075_550064 NZ_CAJZAL010000158.1 Protein Homology CDS 56441 57934 . + 0 ID=cds-WP_224056619.1;Parent=gene-LDO38_RS20505;Dbxref=GenBank:WP_224056619.1;Name=WP_224056619.1;Ontology_term=GO:0009399,GO:0065003;gbkey=CDS;gene=nifE;go_process=nitrogen fixation|0009399||IEA,protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880151.1;locus_tag=LDO38_RS20505;product=nitrogenase iron-molybdenum cofactor biosynthesis protein NifE;protein_id=WP_224056619.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 57955 59367 . + . ID=gene-LDO38_RS20510;Name=nifN;gbkey=Gene;gene=nifN;gene_biotype=protein_coding;locus_tag=LDO38_RS20510;old_locus_tag=BVI2075_550063 NZ_CAJZAL010000158.1 Protein Homology CDS 57955 59367 . + 0 ID=cds-WP_014725871.1;Parent=gene-LDO38_RS20510;Dbxref=GenBank:WP_014725871.1;Name=WP_014725871.1;Ontology_term=GO:0009399,GO:0065003;gbkey=CDS;gene=nifN;go_process=nitrogen fixation|0009399||IEA,protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725871.1;locus_tag=LDO38_RS20510;product=nitrogenase iron-molybdenum cofactor biosynthesis protein NifN;protein_id=WP_014725871.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 59364 59780 . + . ID=gene-LDO38_RS20515;Name=nifX;gbkey=Gene;gene=nifX;gene_biotype=protein_coding;locus_tag=LDO38_RS20515;old_locus_tag=BVI2075_550065 NZ_CAJZAL010000158.1 Protein Homology CDS 59364 59780 . + 0 ID=cds-WP_011880153.1;Parent=gene-LDO38_RS20515;Dbxref=GenBank:WP_011880153.1;Name=WP_011880153.1;Ontology_term=GO:0009399,GO:0051540;gbkey=CDS;gene=nifX;go_function=metal cluster binding|0051540||IEA;go_process=nitrogen fixation|0009399||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880153.1;locus_tag=LDO38_RS20515;product=nitrogen fixation protein NifX;protein_id=WP_011880153.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 59773 60264 . + . ID=gene-LDO38_RS20520;Name=LDO38_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20520;old_locus_tag=BVI2075_550066 NZ_CAJZAL010000158.1 Protein Homology CDS 59773 60264 . + 0 ID=cds-WP_014725872.1;Parent=gene-LDO38_RS20520;Dbxref=GenBank:WP_014725872.1;Name=WP_014725872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725872.1;locus_tag=LDO38_RS20520;product=NifX-associated nitrogen fixation protein;protein_id=WP_014725872.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 60288 60479 . + . ID=gene-LDO38_RS20525;Name=LDO38_RS20525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20525;old_locus_tag=BVI2075_550067 NZ_CAJZAL010000158.1 Protein Homology CDS 60288 60479 . + 0 ID=cds-WP_011880155.1;Parent=gene-LDO38_RS20525;Dbxref=GenBank:WP_011880155.1;Name=WP_011880155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880155.1;locus_tag=LDO38_RS20525;product=CCE_0567 family metalloprotein;protein_id=WP_011880155.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 60496 60804 . + . ID=gene-LDO38_RS20530;Name=fdxB;gbkey=Gene;gene=fdxB;gene_biotype=protein_coding;locus_tag=LDO38_RS20530;old_locus_tag=BVI2075_550068 NZ_CAJZAL010000158.1 Protein Homology CDS 60496 60804 . + 0 ID=cds-WP_011880156.1;Parent=gene-LDO38_RS20530;Dbxref=GenBank:WP_011880156.1;Name=WP_011880156.1;gbkey=CDS;gene=fdxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880156.1;locus_tag=LDO38_RS20530;product=ferredoxin III%2C nif-specific;protein_id=WP_011880156.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 60819 61406 . + . ID=gene-LDO38_RS20535;Name=LDO38_RS20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20535;old_locus_tag=BVI2075_550069 NZ_CAJZAL010000158.1 Protein Homology CDS 60819 61406 . + 0 ID=cds-WP_059561391.1;Parent=gene-LDO38_RS20535;Dbxref=GenBank:WP_059561391.1;Name=WP_059561391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725873.1;locus_tag=LDO38_RS20535;product=nitrogen fixation protein NifQ;protein_id=WP_059561391.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 61506 62123 . + . ID=gene-LDO38_RS20540;Name=LDO38_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20540;old_locus_tag=BVI2075_550070 NZ_CAJZAL010000158.1 Protein Homology CDS 61506 62123 . + 0 ID=cds-WP_011880158.1;Parent=gene-LDO38_RS20540;Dbxref=GenBank:WP_011880158.1;Name=WP_011880158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880158.1;locus_tag=LDO38_RS20540;product=hypothetical protein;protein_id=WP_011880158.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 62126 62668 . + . ID=gene-LDO38_RS20545;Name=LDO38_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20545;old_locus_tag=BVI2075_550071 NZ_CAJZAL010000158.1 Protein Homology CDS 62126 62668 . + 0 ID=cds-WP_059561394.1;Parent=gene-LDO38_RS20545;Dbxref=GenBank:WP_059561394.1;Name=WP_059561394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725875.1;locus_tag=LDO38_RS20545;product=DUF2325 domain-containing protein;protein_id=WP_059561394.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 63022 63696 . + . ID=gene-LDO38_RS20550;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=LDO38_RS20550;old_locus_tag=BVI2075_550072 NZ_CAJZAL010000158.1 Protein Homology CDS 63022 63696 . + 0 ID=cds-WP_014725876.1;Parent=gene-LDO38_RS20550;Dbxref=GenBank:WP_014725876.1;Name=WP_014725876.1;Ontology_term=GO:0015689,GO:0015412,GO:0005886,GO:0055052;gbkey=CDS;gene=modB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725876.1;locus_tag=LDO38_RS20550;product=molybdate ABC transporter permease subunit;protein_id=WP_014725876.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 63712 64464 . + . ID=gene-LDO38_RS20555;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=LDO38_RS20555;old_locus_tag=BVI2075_550073 NZ_CAJZAL010000158.1 Protein Homology CDS 63712 64464 . + 0 ID=cds-WP_014725877.1;Parent=gene-LDO38_RS20555;Dbxref=GenBank:WP_014725877.1;Name=WP_014725877.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880162.1;locus_tag=LDO38_RS20555;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_014725877.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 64477 65256 . + . ID=gene-LDO38_RS20560;Name=LDO38_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20560;old_locus_tag=BVI2075_550074 NZ_CAJZAL010000158.1 Protein Homology CDS 64477 65256 . + 0 ID=cds-WP_014725878.1;Parent=gene-LDO38_RS20560;Dbxref=GenBank:WP_014725878.1;Name=WP_014725878.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725878.1;locus_tag=LDO38_RS20560;product=ATP-binding cassette domain-containing protein;protein_id=WP_014725878.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 65269 66084 . + . ID=gene-LDO38_RS20565;Name=LDO38_RS20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20565;old_locus_tag=BVI2075_550075 NZ_CAJZAL010000158.1 Protein Homology CDS 65269 66084 . + 0 ID=cds-WP_060122457.1;Parent=gene-LDO38_RS20565;Dbxref=GenBank:WP_060122457.1;Name=WP_060122457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725879.1;locus_tag=LDO38_RS20565;product=TOBE domain-containing protein;protein_id=WP_060122457.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 66094 66633 . + . ID=gene-LDO38_RS20570;Name=LDO38_RS20570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20570;old_locus_tag=BVI2075_550076 NZ_CAJZAL010000158.1 Protein Homology CDS 66094 66633 . + 0 ID=cds-WP_212173965.1;Parent=gene-LDO38_RS20570;Dbxref=GenBank:WP_212173965.1;Name=WP_212173965.1;Ontology_term=GO:0009058,GO:0016853,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isomerase activity|0016853||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF014609.6;locus_tag=LDO38_RS20570;product=PhzF family phenazine biosynthesis protein;protein_id=WP_212173965.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 66801 67367 . + . ID=gene-LDO38_RS20575;Name=LDO38_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20575;old_locus_tag=BVI2075_550077 NZ_CAJZAL010000158.1 Protein Homology CDS 66801 67367 . + 0 ID=cds-WP_081053383.1;Parent=gene-LDO38_RS20575;Dbxref=GenBank:WP_081053383.1;Name=WP_081053383.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019498.6;locus_tag=LDO38_RS20575;product=cupin domain-containing protein;protein_id=WP_081053383.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 67534 67677 . + . ID=gene-LDO38_RS20580;Name=LDO38_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20580;old_locus_tag=BVI2075_550078 NZ_CAJZAL010000158.1 GeneMarkS-2+ CDS 67534 67677 . + 0 ID=cds-WP_155624606.1;Parent=gene-LDO38_RS20580;Dbxref=GenBank:WP_155624606.1;Name=WP_155624606.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS20580;product=hypothetical protein;protein_id=WP_155624606.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 67779 68048 . + . ID=gene-LDO38_RS20585;Name=LDO38_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20585;old_locus_tag=BVI2075_550079 NZ_CAJZAL010000158.1 Protein Homology CDS 67779 68048 . + 0 ID=cds-WP_011880168.1;Parent=gene-LDO38_RS20585;Dbxref=GenBank:WP_011880168.1;Name=WP_011880168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424109.1;locus_tag=LDO38_RS20585;product=DUF1778 domain-containing protein;protein_id=WP_011880168.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 68045 68533 . + . ID=gene-LDO38_RS20590;Name=LDO38_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20590;old_locus_tag=BVI2075_550080 NZ_CAJZAL010000158.1 Protein Homology CDS 68045 68533 . + 0 ID=cds-WP_034192730.1;Parent=gene-LDO38_RS20590;Dbxref=GenBank:WP_034192730.1;Name=WP_034192730.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732893.1;locus_tag=LDO38_RS20590;product=GNAT family N-acetyltransferase;protein_id=WP_034192730.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 69519 70406 . + . ID=gene-LDO38_RS20600;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=LDO38_RS20600;old_locus_tag=BVI2075_550082 NZ_CAJZAL010000158.1 Protein Homology CDS 69519 70406 . + 0 ID=cds-WP_212159632.1;Parent=gene-LDO38_RS20600;Dbxref=GenBank:WP_212159632.1;Name=WP_212159632.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cynR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372076.1;locus_tag=LDO38_RS20600;product=transcriptional regulator CynR;protein_id=WP_212159632.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 70829 71086 . - . ID=gene-LDO38_RS20605;Name=LDO38_RS20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20605;old_locus_tag=BVI2075_550083 NZ_CAJZAL010000158.1 Protein Homology CDS 70829 71086 . - 0 ID=cds-WP_034192729.1;Parent=gene-LDO38_RS20605;Dbxref=GenBank:WP_034192729.1;Name=WP_034192729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880172.1;locus_tag=LDO38_RS20605;product=hypothetical protein;protein_id=WP_034192729.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 71516 71995 . - . ID=gene-LDO38_RS20610;Name=LDO38_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20610;old_locus_tag=BVI2075_550084 NZ_CAJZAL010000158.1 Protein Homology CDS 71516 71995 . - 0 ID=cds-WP_046424764.1;Parent=gene-LDO38_RS20610;Dbxref=GenBank:WP_046424764.1;Name=WP_046424764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018437286.1;locus_tag=LDO38_RS20610;product=DUF1348 family protein;protein_id=WP_046424764.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 72091 72561 . - . ID=gene-LDO38_RS20615;Name=cynS;gbkey=Gene;gene=cynS;gene_biotype=protein_coding;locus_tag=LDO38_RS20615;old_locus_tag=BVI2075_550085 NZ_CAJZAL010000158.1 Protein Homology CDS 72091 72561 . - 0 ID=cds-WP_059457549.1;Parent=gene-LDO38_RS20615;Dbxref=GenBank:WP_059457549.1;Name=WP_059457549.1;Ontology_term=GO:0009439,GO:0008824;gbkey=CDS;gene=cynS;go_function=cyanate hydratase activity|0008824||IEA;go_process=cyanate metabolic process|0009439||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020204195.1;locus_tag=LDO38_RS20615;product=cyanase;protein_id=WP_059457549.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 72623 73282 . - . ID=gene-LDO38_RS20620;Name=LDO38_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20620;old_locus_tag=BVI2075_550086 NZ_CAJZAL010000158.1 Protein Homology CDS 72623 73282 . - 0 ID=cds-WP_059463702.1;Parent=gene-LDO38_RS20620;Dbxref=GenBank:WP_059463702.1;Name=WP_059463702.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761771.1;locus_tag=LDO38_RS20620;product=carbonic anhydrase;protein_id=WP_059463702.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq pseudogene 73893 74285 . - . ID=gene-LDO38_RS20630;Name=LDO38_RS20630;end_range=74285,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS20630;partial=true;pseudo=true NZ_CAJZAL010000158.1 Protein Homology CDS 73893 74285 . - 0 ID=cds-LDO38_RS20630;Parent=gene-LDO38_RS20630;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=74285,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024260.6;locus_tag=LDO38_RS20630;partial=true;product=cupin domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 74400 74807 . - . ID=gene-LDO38_RS20635;Name=LDO38_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20635;old_locus_tag=BVI2075_550089 NZ_CAJZAL010000158.1 Protein Homology CDS 74400 74807 . - 0 ID=cds-WP_034192726.1;Parent=gene-LDO38_RS20635;Dbxref=GenBank:WP_034192726.1;Name=WP_034192726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880193.1;locus_tag=LDO38_RS20635;product=DUF934 domain-containing protein;protein_id=WP_034192726.1;transl_table=11 NZ_CAJZAL010000158.1 RefSeq gene 74804 76594 . - . ID=gene-LDO38_RS20640;Name=LDO38_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20640;old_locus_tag=BVI2075_550090 NZ_CAJZAL010000158.1 Protein Homology CDS 74804 76594 . - 0 ID=cds-WP_224056620.1;Parent=gene-LDO38_RS20640;Dbxref=GenBank:WP_224056620.1;Name=WP_224056620.1;Ontology_term=GO:0016491,GO:0020037,GO:0046872,GO:0050311,GO:0051536,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA,sulfite reductase (ferredoxin) activity|0050311||IEA,iron-sulfur cluster binding|0051536||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880194.1;locus_tag=LDO38_RS20640;product=nitrite/sulfite reductase;protein_id=WP_224056620.1;transl_table=11 ##sequence-region NZ_CAJZAL010000159.1 1 85093 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000159.1 RefSeq region 1 85093 . + . ID=NZ_CAJZAL010000159.1:1..85093;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_56 NZ_CAJZAL010000159.1 RefSeq gene 1 880 . + . ID=gene-LDO38_RS20645;Name=LDO38_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20645;old_locus_tag=BVI2075_560001;partial=true;start_range=.,1 NZ_CAJZAL010000159.1 Protein Homology CDS 1 880 . + 1 ID=cds-WP_224056622.1;Parent=gene-LDO38_RS20645;Dbxref=GenBank:WP_224056622.1;Name=WP_224056622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917772.1;locus_tag=LDO38_RS20645;partial=true;product=dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_224056622.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 1162 2949 . + . ID=gene-LDO38_RS20650;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=LDO38_RS20650;old_locus_tag=BVI2075_560002 NZ_CAJZAL010000159.1 Protein Homology CDS 1162 2949 . + 0 ID=cds-WP_124259920.1;Parent=gene-LDO38_RS20650;Dbxref=GenBank:WP_124259920.1;Name=WP_124259920.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213072.1;locus_tag=LDO38_RS20650;product=dihydrolipoyl dehydrogenase;protein_id=WP_124259920.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 3148 3714 . - . ID=gene-LDO38_RS20655;Name=LDO38_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20655;old_locus_tag=BVI2075_560003 NZ_CAJZAL010000159.1 Protein Homology CDS 3148 3714 . - 0 ID=cds-WP_011885423.1;Parent=gene-LDO38_RS20655;Dbxref=GenBank:WP_011885423.1;Name=WP_011885423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331817.1;locus_tag=LDO38_RS20655;product=phasin family protein;protein_id=WP_011885423.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 4368 5519 . + . ID=gene-LDO38_RS20660;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=LDO38_RS20660;old_locus_tag=BVI2075_560005 NZ_CAJZAL010000159.1 Protein Homology CDS 4368 5519 . + 0 ID=cds-WP_011885421.1;Parent=gene-LDO38_RS20660;Dbxref=GenBank:WP_011885421.1;Name=WP_011885421.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401961.1;locus_tag=LDO38_RS20660;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_011885421.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 5624 6433 . - . ID=gene-LDO38_RS20665;Name=LDO38_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20665;old_locus_tag=BVI2075_560006 NZ_CAJZAL010000159.1 Protein Homology CDS 5624 6433 . - 0 ID=cds-WP_011885420.1;Parent=gene-LDO38_RS20665;Dbxref=GenBank:WP_011885420.1;Name=WP_011885420.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524720.1;locus_tag=LDO38_RS20665;product=IclR family transcriptional regulator;protein_id=WP_011885420.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 6628 7350 . + . ID=gene-LDO38_RS20670;Name=LDO38_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20670;old_locus_tag=BVI2075_560007 NZ_CAJZAL010000159.1 Protein Homology CDS 6628 7350 . + 0 ID=cds-WP_011885419.1;Parent=gene-LDO38_RS20670;Dbxref=GenBank:WP_011885419.1;Name=WP_011885419.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549455.1;locus_tag=LDO38_RS20670;product=(Fe-S)-binding protein;protein_id=WP_011885419.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 7385 8797 . + . ID=gene-LDO38_RS20675;Name=LDO38_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20675;old_locus_tag=BVI2075_560008 NZ_CAJZAL010000159.1 Protein Homology CDS 7385 8797 . + 0 ID=cds-WP_059460475.1;Parent=gene-LDO38_RS20675;Dbxref=GenBank:WP_059460475.1;Name=WP_059460475.1;Ontology_term=GO:0046872,GO:0051539;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408173.1;locus_tag=LDO38_RS20675;product=lactate utilization protein B;protein_id=WP_059460475.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 8925 9152 . + . ID=gene-LDO38_RS20680;Name=LDO38_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20680;old_locus_tag=BVI2075_560009 NZ_CAJZAL010000159.1 Protein Homology CDS 8925 9152 . + 0 ID=cds-WP_014723283.1;Parent=gene-LDO38_RS20680;Dbxref=GenBank:WP_014723283.1;Name=WP_014723283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478387.1;locus_tag=LDO38_RS20680;product=hypothetical protein;protein_id=WP_014723283.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 9254 9736 . + . ID=gene-LDO38_RS20685;Name=LDO38_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20685;old_locus_tag=BVI2075_560010 NZ_CAJZAL010000159.1 Protein Homology CDS 9254 9736 . + 0 ID=cds-WP_011885416.1;Parent=gene-LDO38_RS20685;Dbxref=GenBank:WP_011885416.1;Name=WP_011885416.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478388.1;locus_tag=LDO38_RS20685;product=low molecular weight protein-tyrosine-phosphatase;protein_id=WP_011885416.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 9854 10393 . + . ID=gene-LDO38_RS20690;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=LDO38_RS20690;old_locus_tag=BVI2075_560011 NZ_CAJZAL010000159.1 Protein Homology CDS 9854 10393 . + 0 ID=cds-WP_011885415.1;Parent=gene-LDO38_RS20690;Dbxref=GenBank:WP_011885415.1;Name=WP_011885415.1;Ontology_term=GO:0006355,GO:0003690,GO:0003700;gbkey=CDS;gene=iscR;go_function=double-stranded DNA binding|0003690||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195928.1;locus_tag=LDO38_RS20690;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_011885415.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 10467 11690 . + . ID=gene-LDO38_RS20695;Name=LDO38_RS20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20695;old_locus_tag=BVI2075_560012 NZ_CAJZAL010000159.1 Protein Homology CDS 10467 11690 . + 0 ID=cds-WP_011885414.1;Parent=gene-LDO38_RS20695;Dbxref=GenBank:WP_011885414.1;Name=WP_011885414.1;Ontology_term=GO:0044571,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=[2Fe-2S] cluster assembly|0044571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698736.1;locus_tag=LDO38_RS20695;product=IscS subfamily cysteine desulfurase;protein_id=WP_011885414.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 11759 12166 . + . ID=gene-LDO38_RS20700;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=LDO38_RS20700;old_locus_tag=BVI2075_560014 NZ_CAJZAL010000159.1 Protein Homology CDS 11759 12166 . + 0 ID=cds-WP_009691729.1;Parent=gene-LDO38_RS20700;Dbxref=GenBank:WP_009691729.1;Name=WP_009691729.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533937.1;locus_tag=LDO38_RS20700;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_009691729.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 12231 12554 . + . ID=gene-LDO38_RS20705;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=LDO38_RS20705;old_locus_tag=BVI2075_560015 NZ_CAJZAL010000159.1 Protein Homology CDS 12231 12554 . + 0 ID=cds-WP_011885413.1;Parent=gene-LDO38_RS20705;Dbxref=GenBank:WP_011885413.1;Name=WP_011885413.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=iscA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018417526.1;locus_tag=LDO38_RS20705;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_011885413.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 12652 13179 . + . ID=gene-LDO38_RS20710;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=LDO38_RS20710;old_locus_tag=BVI2075_560016 NZ_CAJZAL010000159.1 Protein Homology CDS 12652 13179 . + 0 ID=cds-WP_011885412.1;Parent=gene-LDO38_RS20710;Dbxref=GenBank:WP_011885412.1;Name=WP_011885412.1;Ontology_term=GO:0051259,GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein complex oligomerization|0051259||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091954.1;locus_tag=LDO38_RS20710;product=Fe-S protein assembly co-chaperone HscB;protein_id=WP_011885412.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 13234 15102 . + . ID=gene-LDO38_RS20715;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=LDO38_RS20715;old_locus_tag=BVI2075_560017 NZ_CAJZAL010000159.1 Protein Homology CDS 13234 15102 . + 0 ID=cds-WP_011885411.1;Parent=gene-LDO38_RS20715;Dbxref=GenBank:WP_011885411.1;Name=WP_011885411.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876413.1;locus_tag=LDO38_RS20715;product=Fe-S protein assembly chaperone HscA;protein_id=WP_011885411.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 15186 15527 . + . ID=gene-LDO38_RS20720;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=LDO38_RS20720;old_locus_tag=BVI2075_560018 NZ_CAJZAL010000159.1 Protein Homology CDS 15186 15527 . + 0 ID=cds-WP_011885410.1;Parent=gene-LDO38_RS20720;Dbxref=GenBank:WP_011885410.1;Name=WP_011885410.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193872.1;locus_tag=LDO38_RS20720;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_011885410.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 15564 15773 . + . ID=gene-LDO38_RS20725;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=LDO38_RS20725;old_locus_tag=BVI2075_560020 NZ_CAJZAL010000159.1 Protein Homology CDS 15564 15773 . + 0 ID=cds-WP_011885409.1;Parent=gene-LDO38_RS20725;Dbxref=GenBank:WP_011885409.1;Name=WP_011885409.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601144.1;locus_tag=LDO38_RS20725;product=Fe-S cluster assembly protein IscX;protein_id=WP_011885409.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 15883 16611 . - . ID=gene-LDO38_RS20730;Name=LDO38_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20730;old_locus_tag=BVI2075_560021 NZ_CAJZAL010000159.1 Protein Homology CDS 15883 16611 . - 0 ID=cds-WP_014723279.1;Parent=gene-LDO38_RS20730;Dbxref=GenBank:WP_014723279.1;Name=WP_014723279.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409697.1;locus_tag=LDO38_RS20730;product=glycine zipper 2TM domain-containing protein;protein_id=WP_014723279.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 16959 18485 . - . ID=gene-LDO38_RS20735;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=LDO38_RS20735;old_locus_tag=BVI2075_560022 NZ_CAJZAL010000159.1 Protein Homology CDS 16959 18485 . - 0 ID=cds-WP_124259921.1;Parent=gene-LDO38_RS20735;Dbxref=GenBank:WP_124259921.1;Name=WP_124259921.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091959.1;locus_tag=LDO38_RS20735;product=lysine--tRNA ligase;protein_id=WP_124259921.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 18561 19665 . - . ID=gene-LDO38_RS20740;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=LDO38_RS20740;old_locus_tag=BVI2075_560023 NZ_CAJZAL010000159.1 Protein Homology CDS 19585 19665 . - 0 ID=cds-WP_106919330.1;Parent=gene-LDO38_RS20740;Dbxref=GenBank:WP_106919330.1;Name=WP_106919330.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006998981.1;locus_tag=LDO38_RS20740;product=peptide chain release factor 2;protein_id=WP_106919330.1;transl_table=11 NZ_CAJZAL010000159.1 Protein Homology CDS 18561 19583 . - 0 ID=cds-WP_106919330.1;Parent=gene-LDO38_RS20740;Dbxref=GenBank:WP_106919330.1;Name=WP_106919330.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006998981.1;locus_tag=LDO38_RS20740;product=peptide chain release factor 2;protein_id=WP_106919330.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 19813 21510 . - . ID=gene-LDO38_RS20745;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=LDO38_RS20745;old_locus_tag=BVI2075_560025 NZ_CAJZAL010000159.1 Protein Homology CDS 19813 21510 . - 0 ID=cds-WP_059460476.1;Parent=gene-LDO38_RS20745;Dbxref=GenBank:WP_059460476.1;Name=WP_059460476.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352553.1;locus_tag=LDO38_RS20745;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_059460476.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 21521 22597 . - . ID=gene-LDO38_RS20750;Name=LDO38_RS20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20750;old_locus_tag=BVI2075_560026 NZ_CAJZAL010000159.1 Protein Homology CDS 21521 22597 . - 0 ID=cds-WP_059460477.1;Parent=gene-LDO38_RS20750;Dbxref=GenBank:WP_059460477.1;Name=WP_059460477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657369.1;locus_tag=LDO38_RS20750;product=hypothetical protein;protein_id=WP_059460477.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 22805 24058 . + . ID=gene-LDO38_RS20755;Name=LDO38_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20755;old_locus_tag=BVI2075_560027 NZ_CAJZAL010000159.1 Protein Homology CDS 22805 24058 . + 0 ID=cds-WP_224056623.1;Parent=gene-LDO38_RS20755;Dbxref=GenBank:WP_224056623.1;Name=WP_224056623.1;Ontology_term=GO:0042953,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532144.1;locus_tag=LDO38_RS20755;product=lipoprotein-releasing ABC transporter permease subunit;protein_id=WP_224056623.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 24051 24809 . + . ID=gene-LDO38_RS20760;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=LDO38_RS20760;old_locus_tag=BVI2075_560028 NZ_CAJZAL010000159.1 Protein Homology CDS 24051 24809 . + 0 ID=cds-WP_011885402.1;Parent=gene-LDO38_RS20760;Dbxref=GenBank:WP_011885402.1;Name=WP_011885402.1;Ontology_term=GO:0042953,GO:0005524,GO:0043190;gbkey=CDS;gene=lolD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007580373.1;locus_tag=LDO38_RS20760;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_011885402.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 24872 25660 . + . ID=gene-LDO38_RS20765;Name=LDO38_RS20765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20765;old_locus_tag=BVI2075_560029 NZ_CAJZAL010000159.1 Protein Homology CDS 24872 25660 . + 0 ID=cds-WP_014723275.1;Parent=gene-LDO38_RS20765;Dbxref=GenBank:WP_014723275.1;Name=WP_014723275.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213084.1;locus_tag=LDO38_RS20765;product=TatD family hydrolase;protein_id=WP_014723275.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 25720 28290 . + . ID=gene-LDO38_RS20770;Name=LDO38_RS20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20770;old_locus_tag=BVI2075_560030 NZ_CAJZAL010000159.1 Protein Homology CDS 25720 28290 . + 0 ID=cds-WP_224056624.1;Parent=gene-LDO38_RS20770;Dbxref=GenBank:WP_224056624.1;Name=WP_224056624.1;Ontology_term=GO:0009290,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723274.1;locus_tag=LDO38_RS20770;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_224056624.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 28412 29257 . + . ID=gene-LDO38_RS20775;Name=LDO38_RS20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20775;old_locus_tag=BVI2075_560031 NZ_CAJZAL010000159.1 Protein Homology CDS 28412 29257 . + 0 ID=cds-WP_011885399.1;Parent=gene-LDO38_RS20775;Dbxref=GenBank:WP_011885399.1;Name=WP_011885399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885399.1;locus_tag=LDO38_RS20775;product=alpha/beta fold hydrolase;protein_id=WP_011885399.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 29433 31091 . + . ID=gene-LDO38_RS20780;Name=LDO38_RS20780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20780;old_locus_tag=BVI2075_560032 NZ_CAJZAL010000159.1 Protein Homology CDS 29433 31091 . + 0 ID=cds-WP_011885398.1;Parent=gene-LDO38_RS20780;Dbxref=GenBank:WP_011885398.1;Name=WP_011885398.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904686.1;locus_tag=LDO38_RS20780;product=CTP synthase;protein_id=WP_011885398.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 31088 31942 . + . ID=gene-LDO38_RS20785;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=LDO38_RS20785;old_locus_tag=BVI2075_560033 NZ_CAJZAL010000159.1 Protein Homology CDS 31088 31942 . + 0 ID=cds-WP_011885397.1;Parent=gene-LDO38_RS20785;Dbxref=GenBank:WP_011885397.1;Name=WP_011885397.1;Ontology_term=GO:0009058,GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364209.1;locus_tag=LDO38_RS20785;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_011885397.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 32048 33331 . + . ID=gene-LDO38_RS20790;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=LDO38_RS20790;old_locus_tag=BVI2075_560034 NZ_CAJZAL010000159.1 Protein Homology CDS 32048 33331 . + 0 ID=cds-WP_011885396.1;Parent=gene-LDO38_RS20790;Dbxref=GenBank:WP_011885396.1;Name=WP_011885396.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011001079.1;locus_tag=LDO38_RS20790;product=phosphopyruvate hydratase;protein_id=WP_011885396.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 33413 33835 . + . ID=gene-LDO38_RS20795;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=LDO38_RS20795;old_locus_tag=BVI2075_560035 NZ_CAJZAL010000159.1 Protein Homology CDS 33413 33835 . + 0 ID=cds-WP_011885395.1;Parent=gene-LDO38_RS20795;Dbxref=GenBank:WP_011885395.1;Name=WP_011885395.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401934.1;locus_tag=LDO38_RS20795;product=cell division protein FtsB;protein_id=WP_011885395.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 33933 34286 . - . ID=gene-LDO38_RS20800;Name=LDO38_RS20800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20800;old_locus_tag=BVI2075_560037 NZ_CAJZAL010000159.1 Protein Homology CDS 33933 34286 . - 0 ID=cds-WP_011885394.1;Parent=gene-LDO38_RS20800;Dbxref=GenBank:WP_011885394.1;Name=WP_011885394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885394.1;locus_tag=LDO38_RS20800;product=hypothetical protein;protein_id=WP_011885394.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 34450 35397 . - . ID=gene-LDO38_RS20805;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=LDO38_RS20805;old_locus_tag=BVI2075_560038 NZ_CAJZAL010000159.1 Protein Homology CDS 34450 35397 . - 0 ID=cds-WP_014723272.1;Parent=gene-LDO38_RS20805;Dbxref=GenBank:WP_014723272.1;Name=WP_014723272.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213089.1;locus_tag=LDO38_RS20805;product=Hsp33 family molecular chaperone HslO;protein_id=WP_014723272.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 35423 35947 . - . ID=gene-LDO38_RS20810;Name=LDO38_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20810;old_locus_tag=BVI2075_560039 NZ_CAJZAL010000159.1 Protein Homology CDS 35423 35947 . - 0 ID=cds-WP_011885392.1;Parent=gene-LDO38_RS20810;Dbxref=GenBank:WP_011885392.1;Name=WP_011885392.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890200.1;locus_tag=LDO38_RS20810;product=gamma carbonic anhydrase family protein;protein_id=WP_011885392.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 36099 36956 . + . ID=gene-LDO38_RS20815;Name=LDO38_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20815;old_locus_tag=BVI2075_560040 NZ_CAJZAL010000159.1 Protein Homology CDS 36099 36956 . + 0 ID=cds-WP_046428364.1;Parent=gene-LDO38_RS20815;Dbxref=GenBank:WP_046428364.1;Name=WP_046428364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763954.1;locus_tag=LDO38_RS20815;product=ferritin-like domain-containing protein;protein_id=WP_046428364.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 37215 38105 . + . ID=gene-LDO38_RS20820;Name=LDO38_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20820;old_locus_tag=BVI2075_560041 NZ_CAJZAL010000159.1 Protein Homology CDS 37215 38105 . + 0 ID=cds-WP_046428325.1;Parent=gene-LDO38_RS20820;Dbxref=GenBank:WP_046428325.1;Name=WP_046428325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364204.1;locus_tag=LDO38_RS20820;product=alpha/beta fold hydrolase;protein_id=WP_046428325.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 38188 39018 . + . ID=gene-LDO38_RS20825;Name=LDO38_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20825;old_locus_tag=BVI2075_560042 NZ_CAJZAL010000159.1 Protein Homology CDS 38188 39018 . + 0 ID=cds-WP_014723269.1;Parent=gene-LDO38_RS20825;Dbxref=GenBank:WP_014723269.1;Name=WP_014723269.1;Ontology_term=GO:0016311,GO:0097657;gbkey=CDS;go_function=3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723269.1;locus_tag=LDO38_RS20825;product=3'%2C5'-nucleoside bisphosphate phosphatase;protein_id=WP_014723269.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 39095 39727 . + . ID=gene-LDO38_RS20830;Name=LDO38_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20830;old_locus_tag=BVI2075_560043 NZ_CAJZAL010000159.1 Protein Homology CDS 39095 39727 . + 0 ID=cds-WP_059460479.1;Parent=gene-LDO38_RS20830;Dbxref=GenBank:WP_059460479.1;Name=WP_059460479.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885388.1;locus_tag=LDO38_RS20830;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_059460479.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 39773 40435 . + . ID=gene-LDO38_RS20835;Name=LDO38_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20835;old_locus_tag=BVI2075_560044 NZ_CAJZAL010000159.1 Protein Homology CDS 39773 40435 . + 0 ID=cds-WP_059460480.1;Parent=gene-LDO38_RS20835;Dbxref=GenBank:WP_059460480.1;Name=WP_059460480.1;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009980725.1;locus_tag=LDO38_RS20835;product=site-2 protease family protein;protein_id=WP_059460480.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 40444 41646 . + . ID=gene-LDO38_RS20840;Name=LDO38_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20840;old_locus_tag=BVI2075_560045 NZ_CAJZAL010000159.1 Protein Homology CDS 40444 41646 . + 0 ID=cds-WP_011885386.1;Parent=gene-LDO38_RS20840;Dbxref=GenBank:WP_011885386.1;Name=WP_011885386.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010104925.1;locus_tag=LDO38_RS20840;product=tryptophan--tRNA ligase;protein_id=WP_011885386.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 41656 42258 . + . ID=gene-LDO38_RS20845;Name=LDO38_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20845;old_locus_tag=BVI2075_560047 NZ_CAJZAL010000159.1 Protein Homology CDS 41656 42258 . + 0 ID=cds-WP_059460481.1;Parent=gene-LDO38_RS20845;Dbxref=GenBank:WP_059460481.1;Name=WP_059460481.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401924.1;locus_tag=LDO38_RS20845;product=class I SAM-dependent methyltransferase;protein_id=WP_059460481.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 42306 43211 . + . ID=gene-LDO38_RS20850;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=LDO38_RS20850;old_locus_tag=BVI2075_560046 NZ_CAJZAL010000159.1 Protein Homology CDS 42306 43211 . + 0 ID=cds-WP_011885384.1;Parent=gene-LDO38_RS20850;Dbxref=GenBank:WP_011885384.1;Name=WP_011885384.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751602.1;locus_tag=LDO38_RS20850;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_011885384.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 43323 44468 . + . ID=gene-LDO38_RS20855;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=LDO38_RS20855;old_locus_tag=BVI2075_560048 NZ_CAJZAL010000159.1 Protein Homology CDS 43323 44468 . + 0 ID=cds-WP_011885383.1;Parent=gene-LDO38_RS20855;Dbxref=GenBank:WP_011885383.1;Name=WP_011885383.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904698.1;locus_tag=LDO38_RS20855;product=outer membrane protein assembly factor BamC;protein_id=WP_011885383.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 44473 45249 . + . ID=gene-LDO38_RS20860;Name=LDO38_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20860;old_locus_tag=BVI2075_560049 NZ_CAJZAL010000159.1 Protein Homology CDS 44473 45249 . + 0 ID=cds-WP_046428330.1;Parent=gene-LDO38_RS20860;Dbxref=GenBank:WP_046428330.1;Name=WP_046428330.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885382.1;locus_tag=LDO38_RS20860;product=MBL fold metallo-hydrolase;protein_id=WP_046428330.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 45419 45577 . + . ID=gene-LDO38_RS20865;Name=LDO38_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20865 NZ_CAJZAL010000159.1 Protein Homology CDS 45419 45577 . + 0 ID=cds-WP_014723266.1;Parent=gene-LDO38_RS20865;Dbxref=GenBank:WP_014723266.1;Name=WP_014723266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091987.1;locus_tag=LDO38_RS20865;product=hypothetical protein;protein_id=WP_014723266.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 45598 45843 . - . ID=gene-LDO38_RS30615;Name=LDO38_RS30615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30615;old_locus_tag=BVI2075_560051 NZ_CAJZAL010000159.1 Protein Homology CDS 45598 45843 . - 0 ID=cds-WP_011657350.1;Parent=gene-LDO38_RS30615;Dbxref=GenBank:WP_011657350.1;Name=WP_011657350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657350.1;locus_tag=LDO38_RS30615;product=hypothetical protein;protein_id=WP_011657350.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 45898 47118 . - . ID=gene-LDO38_RS20870;Name=LDO38_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20870;old_locus_tag=BVI2075_560052 NZ_CAJZAL010000159.1 Protein Homology CDS 45898 47118 . - 0 ID=cds-WP_060091996.1;Parent=gene-LDO38_RS20870;Dbxref=GenBank:WP_060091996.1;Name=WP_060091996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761910.1;locus_tag=LDO38_RS20870;product=cupin domain-containing protein;protein_id=WP_060091996.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 47151 47699 . + . ID=gene-LDO38_RS20875;Name=LDO38_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20875;old_locus_tag=BVI2075_560053 NZ_CAJZAL010000159.1 Protein Homology CDS 47151 47699 . + 0 ID=cds-WP_011885380.1;Parent=gene-LDO38_RS20875;Dbxref=GenBank:WP_011885380.1;Name=WP_011885380.1;Ontology_term=GO:0006457,GO:0003755,GO:0046872;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,metal ion binding|0046872||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025990.1;locus_tag=LDO38_RS20875;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_011885380.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 47679 48950 . - . ID=gene-LDO38_RS20880;Name=LDO38_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20880;old_locus_tag=BVI2075_560054 NZ_CAJZAL010000159.1 Protein Homology CDS 47679 48950 . - 0 ID=cds-WP_034192438.1;Parent=gene-LDO38_RS20880;Dbxref=GenBank:WP_034192438.1;Name=WP_034192438.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885379.1;locus_tag=LDO38_RS20880;product=metallophosphoesterase;protein_id=WP_034192438.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 48931 51588 . - . ID=gene-LDO38_RS20885;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=LDO38_RS20885;old_locus_tag=BVI2075_560055 NZ_CAJZAL010000159.1 Protein Homology CDS 48931 51588 . - 0 ID=cds-WP_034192439.1;Parent=gene-LDO38_RS20885;Dbxref=GenBank:WP_034192439.1;Name=WP_034192439.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352525.1;locus_tag=LDO38_RS20885;product=DNA mismatch repair protein MutS;protein_id=WP_034192439.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 52328 53950 . - . ID=gene-LDO38_RS20890;Name=LDO38_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20890;old_locus_tag=BVI2075_560057 NZ_CAJZAL010000159.1 Protein Homology CDS 52328 53950 . - 0 ID=cds-WP_124259924.1;Parent=gene-LDO38_RS20890;Dbxref=GenBank:WP_124259924.1;Name=WP_124259924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483988.1;locus_tag=LDO38_RS20890;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_124259924.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 54063 54866 . - . ID=gene-LDO38_RS20895;Name=LDO38_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20895;old_locus_tag=BVI2075_560058 NZ_CAJZAL010000159.1 Protein Homology CDS 54063 54866 . - 0 ID=cds-WP_011885205.1;Parent=gene-LDO38_RS20895;Dbxref=GenBank:WP_011885205.1;Name=WP_011885205.1;Ontology_term=GO:0006020,GO:0008934,GO:0046872;gbkey=CDS;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA,metal ion binding|0046872||IEA;go_process=inositol metabolic process|0006020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352522.1;locus_tag=LDO38_RS20895;product=inositol monophosphatase family protein;protein_id=WP_011885205.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 55146 55970 . + . ID=gene-LDO38_RS20900;Name=LDO38_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20900;old_locus_tag=BVI2075_560059 NZ_CAJZAL010000159.1 Protein Homology CDS 55146 55970 . + 0 ID=cds-WP_014723261.1;Parent=gene-LDO38_RS20900;Dbxref=GenBank:WP_014723261.1;Name=WP_014723261.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364188.1;locus_tag=LDO38_RS20900;product=RNA methyltransferase;protein_id=WP_014723261.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 56149 56922 . + . ID=gene-LDO38_RS20905;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=LDO38_RS20905;old_locus_tag=BVI2075_560060 NZ_CAJZAL010000159.1 Protein Homology CDS 56149 56922 . + 0 ID=cds-WP_011885203.1;Parent=gene-LDO38_RS20905;Dbxref=GenBank:WP_011885203.1;Name=WP_011885203.1;Ontology_term=GO:0006535,GO:0009001,GO:0005737;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||IEA;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885203.1;locus_tag=LDO38_RS20905;product=serine O-acetyltransferase;protein_id=WP_011885203.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 57000 57800 . - . ID=gene-LDO38_RS20910;Name=LDO38_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20910;old_locus_tag=BVI2075_560061 NZ_CAJZAL010000159.1 Protein Homology CDS 57000 57800 . - 0 ID=cds-WP_014723259.1;Parent=gene-LDO38_RS20910;Dbxref=GenBank:WP_014723259.1;Name=WP_014723259.1;Ontology_term=GO:0009245,GO:0016462;gbkey=CDS;go_function=pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763970.1;locus_tag=LDO38_RS20910;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_014723259.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 57827 58318 . - . ID=gene-LDO38_RS20915;Name=LDO38_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20915;old_locus_tag=BVI2075_560062 NZ_CAJZAL010000159.1 Protein Homology CDS 57827 58318 . - 0 ID=cds-WP_011885201.1;Parent=gene-LDO38_RS20915;Dbxref=GenBank:WP_011885201.1;Name=WP_011885201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016345694.1;locus_tag=LDO38_RS20915;product=peptidylprolyl isomerase;protein_id=WP_011885201.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 58407 58982 . - . ID=gene-LDO38_RS20920;Name=LDO38_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20920;old_locus_tag=BVI2075_560063 NZ_CAJZAL010000159.1 Protein Homology CDS 58407 58982 . - 0 ID=cds-WP_059457919.1;Parent=gene-LDO38_RS20920;Dbxref=GenBank:WP_059457919.1;Name=WP_059457919.1;Ontology_term=GO:0000413,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein peptidyl-prolyl isomerization|0000413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364186.1;locus_tag=LDO38_RS20920;product=peptidylprolyl isomerase;protein_id=WP_059457919.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 59022 59744 . - . ID=gene-LDO38_RS20925;Name=LDO38_RS20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20925;old_locus_tag=BVI2075_560064 NZ_CAJZAL010000159.1 Protein Homology CDS 59022 59744 . - 0 ID=cds-WP_060044880.1;Parent=gene-LDO38_RS20925;Dbxref=GenBank:WP_060044880.1;Name=WP_060044880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851871.1;locus_tag=LDO38_RS20925;product=tetratricopeptide repeat protein;protein_id=WP_060044880.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 59979 61376 . + . ID=gene-LDO38_RS20930;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=LDO38_RS20930;old_locus_tag=BVI2075_560066 NZ_CAJZAL010000159.1 Protein Homology CDS 59979 61376 . + 0 ID=cds-WP_014723256.1;Parent=gene-LDO38_RS20930;Dbxref=GenBank:WP_014723256.1;Name=WP_014723256.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011488917.1;locus_tag=LDO38_RS20930;product=cysteine--tRNA ligase;protein_id=WP_014723256.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 61420 62283 . + . ID=gene-LDO38_RS20935;Name=LDO38_RS20935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20935;old_locus_tag=BVI2075_560067 NZ_CAJZAL010000159.1 Protein Homology CDS 61420 62283 . + 0 ID=cds-WP_011885197.1;Parent=gene-LDO38_RS20935;Dbxref=GenBank:WP_011885197.1;Name=WP_011885197.1;Ontology_term=GO:0006281,GO:0019104,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885197.1;locus_tag=LDO38_RS20935;product=DNA-3-methyladenine glycosylase family protein;protein_id=WP_011885197.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 62383 63354 . + . ID=gene-LDO38_RS20940;Name=LDO38_RS20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20940;old_locus_tag=BVI2075_560068 NZ_CAJZAL010000159.1 Protein Homology CDS 62383 63354 . + 0 ID=cds-WP_011885196.1;Parent=gene-LDO38_RS20940;Dbxref=GenBank:WP_011885196.1;Name=WP_011885196.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065573.1;locus_tag=LDO38_RS20940;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_011885196.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 63398 64804 . + . ID=gene-LDO38_RS20945;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=LDO38_RS20945;old_locus_tag=BVI2075_560069 NZ_CAJZAL010000159.1 Protein Homology CDS 63398 64804 . + 0 ID=cds-WP_046428358.1;Parent=gene-LDO38_RS20945;Dbxref=GenBank:WP_046428358.1;Name=WP_046428358.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328792.1;locus_tag=LDO38_RS20945;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_046428358.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq pseudogene 64926 65163 . - . ID=gene-LDO38_RS30620;Name=LDO38_RS30620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30620;partial=true;pseudo=true;start_range=.,64926 NZ_CAJZAL010000159.1 Protein Homology CDS 64926 65163 . - 0 ID=cds-LDO38_RS30620;Parent=gene-LDO38_RS30620;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010104874.1;locus_tag=LDO38_RS30620;partial=true;product=hypothetical protein;pseudo=true;start_range=.,64926;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 65146 66399 . + . ID=gene-LDO38_RS20950;Name=LDO38_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20950;old_locus_tag=BVI2075_560071 NZ_CAJZAL010000159.1 Protein Homology CDS 65146 66399 . + 0 ID=cds-WP_011885194.1;Parent=gene-LDO38_RS20950;Dbxref=GenBank:WP_011885194.1;Name=WP_011885194.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885194.1;locus_tag=LDO38_RS20950;product=aspartate kinase;protein_id=WP_011885194.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 66510 66603 . + . ID=gene-LDO38_RS20955;Name=LDO38_RS20955;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS20955;old_locus_tag=BVI2075_TRNA10 NZ_CAJZAL010000159.1 tRNAscan-SE tRNA 66510 66603 . + . ID=rna-LDO38_RS20955;Parent=gene-LDO38_RS20955;anticodon=(pos:66544..66546);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS20955;product=tRNA-Ser NZ_CAJZAL010000159.1 tRNAscan-SE exon 66510 66603 . + . ID=exon-LDO38_RS20955-1;Parent=rna-LDO38_RS20955;anticodon=(pos:66544..66546);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS20955;product=tRNA-Ser NZ_CAJZAL010000159.1 RefSeq gene 66754 68127 . + . ID=gene-LDO38_RS20960;Name=LDO38_RS20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20960;old_locus_tag=BVI2075_560072 NZ_CAJZAL010000159.1 Protein Homology CDS 66754 68127 . + 0 ID=cds-WP_059461293.1;Parent=gene-LDO38_RS20960;Dbxref=GenBank:WP_059461293.1;Name=WP_059461293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885193.1;locus_tag=LDO38_RS20960;product=hypothetical protein;protein_id=WP_059461293.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 68554 70083 . + . ID=gene-LDO38_RS20965;Name=LDO38_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20965;old_locus_tag=BVI2075_560073 NZ_CAJZAL010000159.1 Protein Homology CDS 68554 70083 . + 0 ID=cds-WP_014723252.1;Parent=gene-LDO38_RS20965;Dbxref=GenBank:WP_014723252.1;Name=WP_014723252.1;Ontology_term=GO:0015990,GO:0042773,GO:0008137,GO:0048039,GO:0045271;gbkey=CDS;go_component=respiratory chain complex I|0045271||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,ubiquinone binding|0048039||IEA;go_process=electron transport coupled proton transport|0015990||IEA,ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364181.1;locus_tag=LDO38_RS20965;product=complex I subunit 4 family protein;protein_id=WP_014723252.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 70115 70324 . - . ID=gene-LDO38_RS20970;Name=LDO38_RS20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20970;old_locus_tag=BVI2075_560074 NZ_CAJZAL010000159.1 GeneMarkS-2+ CDS 70115 70324 . - 0 ID=cds-WP_080484203.1;Parent=gene-LDO38_RS20970;Dbxref=GenBank:WP_080484203.1;Name=WP_080484203.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS20970;product=hypothetical protein;protein_id=WP_080484203.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 70359 71246 . + . ID=gene-LDO38_RS20975;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=LDO38_RS20975;old_locus_tag=BVI2075_560075 NZ_CAJZAL010000159.1 Protein Homology CDS 70359 71246 . + 0 ID=cds-WP_011885191.1;Parent=gene-LDO38_RS20975;Dbxref=GenBank:WP_011885191.1;Name=WP_011885191.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoA;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213114.1;locus_tag=LDO38_RS20975;product=ubiquinol oxidase subunit II;protein_id=WP_011885191.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 71250 73253 . + . ID=gene-LDO38_RS20980;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=LDO38_RS20980;old_locus_tag=BVI2075_560076 NZ_CAJZAL010000159.1 Protein Homology CDS 71250 73253 . + 0 ID=cds-WP_011885190.1;Parent=gene-LDO38_RS20980;Dbxref=GenBank:WP_011885190.1;Name=WP_011885190.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoB;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331750.1;locus_tag=LDO38_RS20980;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_011885190.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 73253 73861 . + . ID=gene-LDO38_RS20985;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;locus_tag=LDO38_RS20985;old_locus_tag=BVI2075_560077 NZ_CAJZAL010000159.1 Protein Homology CDS 73253 73861 . + 0 ID=cds-WP_011885189.1;Parent=gene-LDO38_RS20985;Dbxref=GenBank:WP_011885189.1;Name=WP_011885189.1;Ontology_term=GO:0019646,GO:0009486;gbkey=CDS;gene=cyoC;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657331.1;locus_tag=LDO38_RS20985;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_011885189.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 73862 74194 . + . ID=gene-LDO38_RS20990;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=LDO38_RS20990;old_locus_tag=BVI2075_560078 NZ_CAJZAL010000159.1 Protein Homology CDS 73862 74194 . + 0 ID=cds-WP_011885188.1;Parent=gene-LDO38_RS20990;Dbxref=GenBank:WP_011885188.1;Name=WP_011885188.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoD;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352504.1;locus_tag=LDO38_RS20990;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_011885188.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 74524 74886 . + . ID=gene-LDO38_RS20995;Name=LDO38_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS20995;old_locus_tag=BVI2075_560079 NZ_CAJZAL010000159.1 Protein Homology CDS 74524 74886 . + 0 ID=cds-WP_059695630.1;Parent=gene-LDO38_RS20995;Dbxref=GenBank:WP_059695630.1;Name=WP_059695630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549502.1;locus_tag=LDO38_RS20995;product=hypothetical protein;protein_id=WP_059695630.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 75221 77104 . + . ID=gene-LDO38_RS21000;Name=LDO38_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21000;old_locus_tag=BVI2075_560080 NZ_CAJZAL010000159.1 Protein Homology CDS 75221 77104 . + 0 ID=cds-WP_014723248.1;Parent=gene-LDO38_RS21000;Dbxref=GenBank:WP_014723248.1;Name=WP_014723248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885186.1;locus_tag=LDO38_RS21000;product=extracellular solute-binding protein;protein_id=WP_014723248.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 77157 78200 . + . ID=gene-LDO38_RS21005;Name=LDO38_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21005;old_locus_tag=BVI2075_560081 NZ_CAJZAL010000159.1 Protein Homology CDS 77157 78200 . + 0 ID=cds-WP_011885185.1;Parent=gene-LDO38_RS21005;Dbxref=GenBank:WP_011885185.1;Name=WP_011885185.1;Ontology_term=GO:0042884,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=microcin transport|0042884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890352.1;locus_tag=LDO38_RS21005;product=microcin C ABC transporter permease YejB;protein_id=WP_011885185.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 78276 79373 . + . ID=gene-LDO38_RS21010;Name=LDO38_RS21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21010;old_locus_tag=BVI2075_560083 NZ_CAJZAL010000159.1 Protein Homology CDS 78276 79373 . + 0 ID=cds-WP_011885184.1;Parent=gene-LDO38_RS21010;Dbxref=GenBank:WP_011885184.1;Name=WP_011885184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478449.1;locus_tag=LDO38_RS21010;product=ABC transporter permease;protein_id=WP_011885184.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 79370 80992 . + . ID=gene-LDO38_RS21015;Name=LDO38_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21015;old_locus_tag=BVI2075_560082 NZ_CAJZAL010000159.1 Protein Homology CDS 79370 80992 . + 0 ID=cds-WP_011885183.1;Parent=gene-LDO38_RS21015;Dbxref=GenBank:WP_011885183.1;Name=WP_011885183.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885183.1;locus_tag=LDO38_RS21015;product=ABC transporter ATP-binding protein;protein_id=WP_011885183.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 81122 81793 . + . ID=gene-LDO38_RS21020;Name=LDO38_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21020;old_locus_tag=BVI2075_560084 NZ_CAJZAL010000159.1 Protein Homology CDS 81122 81793 . + 0 ID=cds-WP_011885182.1;Parent=gene-LDO38_RS21020;Dbxref=GenBank:WP_011885182.1;Name=WP_011885182.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760701.1;locus_tag=LDO38_RS21020;product=C40 family peptidase;protein_id=WP_011885182.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 81884 82798 . - . ID=gene-LDO38_RS21025;Name=LDO38_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21025;old_locus_tag=BVI2075_560085 NZ_CAJZAL010000159.1 Protein Homology CDS 81884 82798 . - 0 ID=cds-WP_011885181.1;Parent=gene-LDO38_RS21025;Dbxref=GenBank:WP_011885181.1;Name=WP_011885181.1;Ontology_term=GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364163.1;locus_tag=LDO38_RS21025;product=patatin-like phospholipase family protein;protein_id=WP_011885181.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 83078 84487 . + . ID=gene-LDO38_RS21030;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=LDO38_RS21030;old_locus_tag=BVI2075_560086 NZ_CAJZAL010000159.1 Protein Homology CDS 83078 84487 . + 0 ID=cds-WP_011885180.1;Parent=gene-LDO38_RS21030;Dbxref=GenBank:WP_011885180.1;Name=WP_011885180.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723246.1;locus_tag=LDO38_RS21030;product=glutamate--tRNA ligase;protein_id=WP_011885180.1;transl_table=11 NZ_CAJZAL010000159.1 RefSeq gene 84615 84690 . + . ID=gene-LDO38_RS21035;Name=LDO38_RS21035;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS21035;old_locus_tag=BVI2075_TRNA11 NZ_CAJZAL010000159.1 tRNAscan-SE tRNA 84615 84690 . + . ID=rna-LDO38_RS21035;Parent=gene-LDO38_RS21035;anticodon=(pos:84648..84650);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS21035;product=tRNA-Ala NZ_CAJZAL010000159.1 tRNAscan-SE exon 84615 84690 . + . ID=exon-LDO38_RS21035-1;Parent=rna-LDO38_RS21035;anticodon=(pos:84648..84650);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS21035;product=tRNA-Ala NZ_CAJZAL010000159.1 RefSeq gene 84950 85026 . + . ID=gene-LDO38_RS21040;Name=LDO38_RS21040;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS21040;old_locus_tag=BVI2075_TRNA12 NZ_CAJZAL010000159.1 tRNAscan-SE tRNA 84950 85026 . + . ID=rna-LDO38_RS21040;Parent=gene-LDO38_RS21040;anticodon=(pos:84984..84986);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS21040;product=tRNA-Asp NZ_CAJZAL010000159.1 tRNAscan-SE exon 84950 85026 . + . ID=exon-LDO38_RS21040-1;Parent=rna-LDO38_RS21040;anticodon=(pos:84984..84986);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS21040;product=tRNA-Asp ##sequence-region NZ_CAJZAL010000160.1 1 69242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000160.1 RefSeq region 1 69242 . + . ID=NZ_CAJZAL010000160.1:1..69242;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_57 NZ_CAJZAL010000160.1 RefSeq pseudogene 1 139 . - . ID=gene-LDO38_RS21045;Name=LDO38_RS21045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS21045;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000160.1 Protein Homology CDS 1 139 . - 0 ID=cds-LDO38_RS21045;Parent=gene-LDO38_RS21045;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533517.1;locus_tag=LDO38_RS21045;partial=true;product=type II secretion system protein GspL;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 164 1264 . - . ID=gene-LDO38_RS21050;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=LDO38_RS21050;old_locus_tag=BVI2075_570002 NZ_CAJZAL010000160.1 Protein Homology CDS 164 1264 . - 0 ID=cds-WP_034193034.1;Parent=gene-LDO38_RS21050;Dbxref=GenBank:WP_034193034.1;Name=WP_034193034.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=gspK;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327583.1;locus_tag=LDO38_RS21050;product=type II secretion system minor pseudopilin GspK;protein_id=WP_034193034.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 1267 1971 . - . ID=gene-LDO38_RS21055;Name=LDO38_RS21055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21055;old_locus_tag=BVI2075_570003 NZ_CAJZAL010000160.1 Protein Homology CDS 1267 1971 . - 0 ID=cds-WP_011882769.1;Parent=gene-LDO38_RS21055;Dbxref=GenBank:WP_011882769.1;Name=WP_011882769.1;Ontology_term=GO:0015628,GO:0005886,GO:0015627;gbkey=CDS;go_component=plasma membrane|0005886||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185018.1;locus_tag=LDO38_RS21055;product=PulJ/GspJ family protein;protein_id=WP_011882769.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 1949 2356 . - . ID=gene-LDO38_RS21060;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=LDO38_RS21060;old_locus_tag=BVI2075_570004 NZ_CAJZAL010000160.1 Protein Homology CDS 1949 2356 . - 0 ID=cds-WP_043290598.1;Parent=gene-LDO38_RS21060;Dbxref=GenBank:WP_043290598.1;Name=WP_043290598.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524538.1;locus_tag=LDO38_RS21060;product=type II secretion system minor pseudopilin GspI;protein_id=WP_043290598.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 2353 2883 . - . ID=gene-LDO38_RS21065;Name=LDO38_RS21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21065;old_locus_tag=BVI2075_570005 NZ_CAJZAL010000160.1 Protein Homology CDS 2353 2883 . - 0 ID=cds-WP_069246096.1;Parent=gene-LDO38_RS21065;Dbxref=GenBank:WP_069246096.1;Name=WP_069246096.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751355.1;locus_tag=LDO38_RS21065;product=GspH/FimT family pseudopilin;protein_id=WP_069246096.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 2926 3378 . - . ID=gene-LDO38_RS21070;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=LDO38_RS21070;old_locus_tag=BVI2075_570006 NZ_CAJZAL010000160.1 Protein Homology CDS 2926 3378 . - 0 ID=cds-WP_045578645.1;Parent=gene-LDO38_RS21070;Dbxref=GenBank:WP_045578645.1;Name=WP_045578645.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751354.1;locus_tag=LDO38_RS21070;product=type II secretion system major pseudopilin GspG;protein_id=WP_045578645.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 3552 3962 . + . ID=gene-LDO38_RS21075;Name=LDO38_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21075;old_locus_tag=BVI2075_570007 NZ_CAJZAL010000160.1 Protein Homology CDS 3552 3962 . + 0 ID=cds-WP_011882773.1;Parent=gene-LDO38_RS21075;Dbxref=GenBank:WP_011882773.1;Name=WP_011882773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910818.1;locus_tag=LDO38_RS21075;product=hypothetical protein;protein_id=WP_011882773.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 3993 5210 . - . ID=gene-LDO38_RS21080;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=LDO38_RS21080;old_locus_tag=BVI2075_570008 NZ_CAJZAL010000160.1 Protein Homology CDS 3993 5210 . - 0 ID=cds-WP_011882774.1;Parent=gene-LDO38_RS21080;Dbxref=GenBank:WP_011882774.1;Name=WP_011882774.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477248.1;locus_tag=LDO38_RS21080;product=type II secretion system inner membrane protein GspF;protein_id=WP_011882774.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 5215 6714 . - . ID=gene-LDO38_RS21085;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=LDO38_RS21085;old_locus_tag=BVI2075_570009 NZ_CAJZAL010000160.1 Protein Homology CDS 5215 6714 . - 0 ID=cds-WP_011882775.1;Parent=gene-LDO38_RS21085;Dbxref=GenBank:WP_011882775.1;Name=WP_011882775.1;Ontology_term=GO:0015628,GO:0005524,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_function=ATP binding|0005524||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490004.1;locus_tag=LDO38_RS21085;product=type II secretion system ATPase GspE;protein_id=WP_011882775.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 6711 9035 . - . ID=gene-LDO38_RS21090;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=LDO38_RS21090;old_locus_tag=BVI2075_570010 NZ_CAJZAL010000160.1 Protein Homology CDS 6711 9035 . - 0 ID=cds-WP_041493718.1;Parent=gene-LDO38_RS21090;Dbxref=GenBank:WP_041493718.1;Name=WP_041493718.1;Ontology_term=GO:0015628,GO:0015627,GO:0019867;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA,outer membrane|0019867||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544449.1;locus_tag=LDO38_RS21090;product=type II secretion system secretin GspD;protein_id=WP_041493718.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 9408 9854 . + . ID=gene-LDO38_RS21095;Name=LDO38_RS21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21095;old_locus_tag=BVI2075_570011 NZ_CAJZAL010000160.1 Protein Homology CDS 9408 9854 . + 0 ID=cds-WP_014722145.1;Parent=gene-LDO38_RS21095;Dbxref=GenBank:WP_014722145.1;Name=WP_014722145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401507.1;locus_tag=LDO38_RS21095;product=lytic transglycosylase domain-containing protein;protein_id=WP_014722145.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 10000 11310 . + . ID=gene-LDO38_RS21100;Name=LDO38_RS21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21100;old_locus_tag=BVI2075_570012 NZ_CAJZAL010000160.1 Protein Homology CDS 10000 11310 . + 0 ID=cds-WP_011882778.1;Parent=gene-LDO38_RS21100;Dbxref=GenBank:WP_011882778.1;Name=WP_011882778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759200.1;locus_tag=LDO38_RS21100;product=GTP-binding protein;protein_id=WP_011882778.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 11451 11729 . - . ID=gene-LDO38_RS21105;Name=LDO38_RS21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21105;old_locus_tag=BVI2075_570013 NZ_CAJZAL010000160.1 Protein Homology CDS 11451 11729 . - 0 ID=cds-WP_006401505.1;Parent=gene-LDO38_RS21105;Dbxref=GenBank:WP_006401505.1;Name=WP_006401505.1;Ontology_term=GO:0030261,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008352404.1;locus_tag=LDO38_RS21105;product=HU family DNA-binding protein;protein_id=WP_006401505.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 12119 14080 . + . ID=gene-LDO38_RS21110;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=LDO38_RS21110;old_locus_tag=BVI2075_570015 NZ_CAJZAL010000160.1 Protein Homology CDS 12119 14080 . + 0 ID=cds-WP_069246097.1;Parent=gene-LDO38_RS21110;Dbxref=GenBank:WP_069246097.1;Name=WP_069246097.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759201.1;locus_tag=LDO38_RS21110;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_069246097.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 14753 15967 . + . ID=gene-LDO38_RS21115;Name=LDO38_RS21115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21115;old_locus_tag=BVI2075_570016 NZ_CAJZAL010000160.1 Protein Homology CDS 14753 15967 . + 0 ID=cds-WP_059454910.1;Parent=gene-LDO38_RS21115;Dbxref=GenBank:WP_059454910.1;Name=WP_059454910.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327590.1;locus_tag=LDO38_RS21115;product=cation:proton antiporter;protein_id=WP_059454910.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 15982 17097 . + . ID=gene-LDO38_RS21120;Name=LDO38_RS21120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21120;old_locus_tag=BVI2075_570017 NZ_CAJZAL010000160.1 Protein Homology CDS 15982 17097 . + 0 ID=cds-WP_046425491.1;Parent=gene-LDO38_RS21120;Dbxref=GenBank:WP_046425491.1;Name=WP_046425491.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334758.1;locus_tag=LDO38_RS21120;product=YbdK family carboxylate-amine ligase;protein_id=WP_046425491.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 17602 18240 . + . ID=gene-LDO38_RS21125;Name=LDO38_RS21125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21125;old_locus_tag=BVI2075_570018 NZ_CAJZAL010000160.1 Protein Homology CDS 17602 18240 . + 0 ID=cds-WP_011882784.1;Parent=gene-LDO38_RS21125;Dbxref=GenBank:WP_011882784.1;Name=WP_011882784.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408074.1;locus_tag=LDO38_RS21125;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_011882784.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 18269 18979 . + . ID=gene-LDO38_RS21130;Name=LDO38_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21130;old_locus_tag=BVI2075_570019 NZ_CAJZAL010000160.1 Protein Homology CDS 18269 18979 . + 0 ID=cds-WP_034193033.1;Parent=gene-LDO38_RS21130;Dbxref=GenBank:WP_034193033.1;Name=WP_034193033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601196.1;locus_tag=LDO38_RS21130;product=glutamine amidotransferase;protein_id=WP_034193033.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 19160 20272 . + . ID=gene-LDO38_RS21135;Name=LDO38_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21135;old_locus_tag=BVI2075_570020 NZ_CAJZAL010000160.1 Protein Homology CDS 19160 20272 . + 0 ID=cds-WP_059460843.1;Parent=gene-LDO38_RS21135;Dbxref=GenBank:WP_059460843.1;Name=WP_059460843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010093147.1;locus_tag=LDO38_RS21135;product=NADH:flavin oxidoreductase/NADH oxidase;protein_id=WP_059460843.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 20456 20986 . + . ID=gene-LDO38_RS21140;Name=LDO38_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21140;old_locus_tag=BVI2075_570022 NZ_CAJZAL010000160.1 Protein Homology CDS 20456 20986 . + 0 ID=cds-WP_034192996.1;Parent=gene-LDO38_RS21140;Dbxref=GenBank:WP_034192996.1;Name=WP_034192996.1;Ontology_term=GO:0005515,GO:0008168,GO:1904047;gbkey=CDS;go_function=protein binding|0005515||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362746.1;locus_tag=LDO38_RS21140;product=SET domain-containing protein;protein_id=WP_034192996.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 21126 22610 . - . ID=gene-LDO38_RS21145;Name=LDO38_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21145;old_locus_tag=BVI2075_570023 NZ_CAJZAL010000160.1 Protein Homology CDS 21126 22610 . - 0 ID=cds-WP_011882788.1;Parent=gene-LDO38_RS21145;Dbxref=GenBank:WP_011882788.1;Name=WP_011882788.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492237.1;locus_tag=LDO38_RS21145;product=sensor histidine kinase;protein_id=WP_011882788.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 22740 23432 . - . ID=gene-LDO38_RS21150;Name=LDO38_RS21150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21150;old_locus_tag=BVI2075_570024 NZ_CAJZAL010000160.1 Protein Homology CDS 22740 23432 . - 0 ID=cds-WP_006401494.1;Parent=gene-LDO38_RS21150;Dbxref=GenBank:WP_006401494.1;Name=WP_006401494.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401494.1;locus_tag=LDO38_RS21150;product=response regulator;protein_id=WP_006401494.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 23555 23785 . + . ID=gene-LDO38_RS21155;Name=LDO38_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21155;old_locus_tag=BVI2075_570025 NZ_CAJZAL010000160.1 Protein Homology CDS 23555 23785 . + 0 ID=cds-WP_014722154.1;Parent=gene-LDO38_RS21155;Dbxref=GenBank:WP_014722154.1;Name=WP_014722154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401493.1;locus_tag=LDO38_RS21155;product=DUF3717 domain-containing protein;protein_id=WP_014722154.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 23879 24187 . - . ID=gene-LDO38_RS21160;Name=LDO38_RS21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21160;old_locus_tag=BVI2075_570026 NZ_CAJZAL010000160.1 Protein Homology CDS 23879 24187 . - 0 ID=cds-WP_011882790.1;Parent=gene-LDO38_RS21160;Dbxref=GenBank:WP_011882790.1;Name=WP_011882790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694015.1;locus_tag=LDO38_RS21160;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=WP_011882790.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 24341 25267 . - . ID=gene-LDO38_RS21165;Name=phhA;gbkey=Gene;gene=phhA;gene_biotype=protein_coding;locus_tag=LDO38_RS21165;old_locus_tag=BVI2075_570027 NZ_CAJZAL010000160.1 Protein Homology CDS 24341 25267 . - 0 ID=cds-WP_185499744.1;Parent=gene-LDO38_RS21165;Dbxref=GenBank:WP_185499744.1;Name=WP_185499744.1;Ontology_term=GO:0006559,GO:0004505;gbkey=CDS;gene=phhA;go_function=phenylalanine 4-monooxygenase activity|0004505||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895476.1;locus_tag=LDO38_RS21165;product=phenylalanine 4-monooxygenase;protein_id=WP_185499744.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 25374 25859 . + . ID=gene-LDO38_RS21170;Name=LDO38_RS21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21170;old_locus_tag=BVI2075_570028 NZ_CAJZAL010000160.1 Protein Homology CDS 25374 25859 . + 0 ID=cds-WP_006408082.1;Parent=gene-LDO38_RS21170;Dbxref=GenBank:WP_006408082.1;Name=WP_006408082.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010093131.1;locus_tag=LDO38_RS21170;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_006408082.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 25939 26472 . - . ID=gene-LDO38_RS21175;Name=LDO38_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21175;old_locus_tag=BVI2075_570029 NZ_CAJZAL010000160.1 Protein Homology CDS 25939 26472 . - 0 ID=cds-WP_046425480.1;Parent=gene-LDO38_RS21175;Dbxref=GenBank:WP_046425480.1;Name=WP_046425480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546816.1;locus_tag=LDO38_RS21175;product=class IV adenylate cyclase;protein_id=WP_046425480.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 26560 27459 . - . ID=gene-LDO38_RS21180;Name=LDO38_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21180;old_locus_tag=BVI2075_570030 NZ_CAJZAL010000160.1 Protein Homology CDS 26560 27459 . - 0 ID=cds-WP_034192994.1;Parent=gene-LDO38_RS21180;Dbxref=GenBank:WP_034192994.1;Name=WP_034192994.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004556010.1;locus_tag=LDO38_RS21180;product=LysR family transcriptional regulator;protein_id=WP_034192994.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 27624 29309 . + . ID=gene-LDO38_RS21185;Name=LDO38_RS21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21185;old_locus_tag=BVI2075_570031 NZ_CAJZAL010000160.1 Protein Homology CDS 27624 29309 . + 0 ID=cds-WP_011882794.1;Parent=gene-LDO38_RS21185;Dbxref=GenBank:WP_011882794.1;Name=WP_011882794.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751333.1;locus_tag=LDO38_RS21185;product=GMC family oxidoreductase;protein_id=WP_011882794.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 29763 30542 . + . ID=gene-LDO38_RS21190;Name=LDO38_RS21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21190;old_locus_tag=BVI2075_570032 NZ_CAJZAL010000160.1 Protein Homology CDS 29763 30542 . + 0 ID=cds-WP_011882795.1;Parent=gene-LDO38_RS21190;Dbxref=GenBank:WP_011882795.1;Name=WP_011882795.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008917939.1;locus_tag=LDO38_RS21190;product=ABC transporter ATP-binding protein;protein_id=WP_011882795.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 30539 31294 . + . ID=gene-LDO38_RS21195;Name=LDO38_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21195;old_locus_tag=BVI2075_570033 NZ_CAJZAL010000160.1 Protein Homology CDS 30539 31294 . + 0 ID=cds-WP_014722161.1;Parent=gene-LDO38_RS21195;Dbxref=GenBank:WP_014722161.1;Name=WP_014722161.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023954.1;locus_tag=LDO38_RS21195;product=ABC transporter ATP-binding protein;protein_id=WP_014722161.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 31372 32571 . + . ID=gene-LDO38_RS21200;Name=LDO38_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21200;old_locus_tag=BVI2075_570034 NZ_CAJZAL010000160.1 Protein Homology CDS 31372 32571 . + 0 ID=cds-WP_059474941.1;Parent=gene-LDO38_RS21200;Dbxref=GenBank:WP_059474941.1;Name=WP_059474941.1;Ontology_term=GO:0055085,GO:0022857,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185183.1;locus_tag=LDO38_RS21200;product=ABC transporter substrate-binding protein;protein_id=WP_059474941.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 32691 33575 . + . ID=gene-LDO38_RS21205;Name=LDO38_RS21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21205;old_locus_tag=BVI2075_570035 NZ_CAJZAL010000160.1 Protein Homology CDS 32691 33575 . + 0 ID=cds-WP_014722163.1;Parent=gene-LDO38_RS21205;Dbxref=GenBank:WP_014722163.1;Name=WP_014722163.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401481.1;locus_tag=LDO38_RS21205;product=branched-chain amino acid ABC transporter permease;protein_id=WP_014722163.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 33575 34549 . + . ID=gene-LDO38_RS21210;Name=LDO38_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21210;old_locus_tag=BVI2075_570036 NZ_CAJZAL010000160.1 Protein Homology CDS 33575 34549 . + 0 ID=cds-WP_011882799.1;Parent=gene-LDO38_RS21210;Dbxref=GenBank:WP_011882799.1;Name=WP_011882799.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600354.1;locus_tag=LDO38_RS21210;product=branched-chain amino acid ABC transporter permease;protein_id=WP_011882799.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 35038 35460 . - . ID=gene-LDO38_RS21215;Name=LDO38_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21215;old_locus_tag=BVI2075_570037 NZ_CAJZAL010000160.1 GeneMarkS-2+ CDS 35038 35460 . - 0 ID=cds-WP_224056625.1;Parent=gene-LDO38_RS21215;Dbxref=GenBank:WP_224056625.1;Name=WP_224056625.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS21215;product=hypothetical protein;protein_id=WP_224056625.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 35622 36779 . + . ID=gene-LDO38_RS21220;Name=LDO38_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21220;old_locus_tag=BVI2075_570038 NZ_CAJZAL010000160.1 Protein Homology CDS 35622 36779 . + 0 ID=cds-WP_059474940.1;Parent=gene-LDO38_RS21220;Dbxref=GenBank:WP_059474940.1;Name=WP_059474940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762981.1;locus_tag=LDO38_RS21220;product=ABC transporter substrate-binding protein;protein_id=WP_059474940.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 36942 37997 . + . ID=gene-LDO38_RS21225;Name=LDO38_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21225;old_locus_tag=BVI2075_570039 NZ_CAJZAL010000160.1 Protein Homology CDS 36942 37997 . + 0 ID=cds-WP_059474939.1;Parent=gene-LDO38_RS21225;Dbxref=GenBank:WP_059474939.1;Name=WP_059474939.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401477.1;locus_tag=LDO38_RS21225;product=branched-chain amino acid ABC transporter permease;protein_id=WP_059474939.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 38002 39786 . + . ID=gene-LDO38_RS21230;Name=LDO38_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21230;old_locus_tag=BVI2075_570040 NZ_CAJZAL010000160.1 Protein Homology CDS 38002 39786 . + 0 ID=cds-WP_059474938.1;Parent=gene-LDO38_RS21230;Dbxref=GenBank:WP_059474938.1;Name=WP_059474938.1;Ontology_term=GO:0015803,GO:0005524,GO:0015658,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,branched-chain amino acid transmembrane transporter activity|0015658||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655609.1;locus_tag=LDO38_RS21230;product=branched-chain amino acid ABC transporter ATP-binding protein/permease;protein_id=WP_059474938.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 39786 40541 . + . ID=gene-LDO38_RS21235;Name=LDO38_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21235;old_locus_tag=BVI2075_570041 NZ_CAJZAL010000160.1 Protein Homology CDS 39786 40541 . + 0 ID=cds-WP_059474937.1;Parent=gene-LDO38_RS21235;Dbxref=GenBank:WP_059474937.1;Name=WP_059474937.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895489.1;locus_tag=LDO38_RS21235;product=ABC transporter ATP-binding protein;protein_id=WP_059474937.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 41011 42981 . + . ID=gene-LDO38_RS21240;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=LDO38_RS21240;old_locus_tag=BVI2075_570042 NZ_CAJZAL010000160.1 Protein Homology CDS 41011 42981 . + 0 ID=cds-WP_011882804.1;Parent=gene-LDO38_RS21240;Dbxref=GenBank:WP_011882804.1;Name=WP_011882804.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010093113.1;locus_tag=LDO38_RS21240;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_011882804.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 42978 43664 . + . ID=gene-LDO38_RS21245;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=LDO38_RS21245;old_locus_tag=BVI2075_570043 NZ_CAJZAL010000160.1 Protein Homology CDS 42978 43664 . + 0 ID=cds-WP_046425470.1;Parent=gene-LDO38_RS21245;Dbxref=GenBank:WP_046425470.1;Name=WP_046425470.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756475.1;locus_tag=LDO38_RS21245;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_046425470.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 43715 44494 . + . ID=gene-LDO38_RS21250;Name=LDO38_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21250;old_locus_tag=BVI2075_570044 NZ_CAJZAL010000160.1 Protein Homology CDS 43715 44494 . + 0 ID=cds-WP_011882806.1;Parent=gene-LDO38_RS21250;Dbxref=GenBank:WP_011882806.1;Name=WP_011882806.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895493.1;locus_tag=LDO38_RS21250;product=ParA family protein;protein_id=WP_011882806.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 44526 45419 . + . ID=gene-LDO38_RS21255;Name=LDO38_RS21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21255;old_locus_tag=BVI2075_570045 NZ_CAJZAL010000160.1 Protein Homology CDS 44526 45419 . + 0 ID=cds-WP_011882807.1;Parent=gene-LDO38_RS21255;Dbxref=GenBank:WP_011882807.1;Name=WP_011882807.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895494.1;locus_tag=LDO38_RS21255;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_011882807.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 45433 46563 . + . ID=gene-LDO38_RS21260;Name=LDO38_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21260;old_locus_tag=BVI2075_570046 NZ_CAJZAL010000160.1 Protein Homology CDS 45433 46563 . + 0 ID=cds-WP_175898749.1;Parent=gene-LDO38_RS21260;Dbxref=GenBank:WP_175898749.1;Name=WP_175898749.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496314.1;locus_tag=LDO38_RS21260;product=SLC13 family permease;protein_id=WP_175898749.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 46676 46954 . - . ID=gene-LDO38_RS21265;Name=LDO38_RS21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21265 NZ_CAJZAL010000160.1 GeneMarkS-2+ CDS 46676 46954 . - 0 ID=cds-WP_124260015.1;Parent=gene-LDO38_RS21265;Dbxref=GenBank:WP_124260015.1;Name=WP_124260015.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS21265;product=hypothetical protein;protein_id=WP_124260015.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 47139 47666 . + . ID=gene-LDO38_RS21270;Name=LDO38_RS21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21270;old_locus_tag=BVI2075_570048 NZ_CAJZAL010000160.1 Protein Homology CDS 47139 47666 . + 0 ID=cds-WP_011882810.1;Parent=gene-LDO38_RS21270;Dbxref=GenBank:WP_011882810.1;Name=WP_011882810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401468.1;locus_tag=LDO38_RS21270;product=ATP synthase subunit I;protein_id=WP_011882810.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 47776 48627 . + . ID=gene-LDO38_RS21275;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=LDO38_RS21275;old_locus_tag=BVI2075_570049 NZ_CAJZAL010000160.1 Protein Homology CDS 47776 48627 . + 0 ID=cds-WP_011882811.1;Parent=gene-LDO38_RS21275;Dbxref=GenBank:WP_011882811.1;Name=WP_011882811.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011204192.1;locus_tag=LDO38_RS21275;product=F0F1 ATP synthase subunit A;protein_id=WP_011882811.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 48703 48972 . + . ID=gene-LDO38_RS21280;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=LDO38_RS21280;old_locus_tag=BVI2075_570050 NZ_CAJZAL010000160.1 Protein Homology CDS 48703 48972 . + 0 ID=cds-WP_006482730.1;Parent=gene-LDO38_RS21280;Dbxref=GenBank:WP_006482730.1;Name=WP_006482730.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734176.1;locus_tag=LDO38_RS21280;product=F0F1 ATP synthase subunit C;protein_id=WP_006482730.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 49102 49572 . + . ID=gene-LDO38_RS21285;Name=LDO38_RS21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21285;old_locus_tag=BVI2075_570051 NZ_CAJZAL010000160.1 Protein Homology CDS 49102 49572 . + 0 ID=cds-WP_011882812.1;Parent=gene-LDO38_RS21285;Dbxref=GenBank:WP_011882812.1;Name=WP_011882812.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017772246.1;locus_tag=LDO38_RS21285;product=F0F1 ATP synthase subunit B;protein_id=WP_011882812.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 49575 50114 . + . ID=gene-LDO38_RS21290;Name=LDO38_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21290;old_locus_tag=BVI2075_570052 NZ_CAJZAL010000160.1 Protein Homology CDS 49575 50114 . + 0 ID=cds-WP_011882813.1;Parent=gene-LDO38_RS21290;Dbxref=GenBank:WP_011882813.1;Name=WP_011882813.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895498.1;locus_tag=LDO38_RS21290;product=F0F1 ATP synthase subunit delta;protein_id=WP_011882813.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 50159 51700 . + . ID=gene-LDO38_RS21295;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=LDO38_RS21295;old_locus_tag=BVI2075_570053 NZ_CAJZAL010000160.1 Protein Homology CDS 50159 51700 . + 0 ID=cds-WP_011882814.1;Parent=gene-LDO38_RS21295;Dbxref=GenBank:WP_011882814.1;Name=WP_011882814.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524507.1;locus_tag=LDO38_RS21295;product=F0F1 ATP synthase subunit alpha;protein_id=WP_011882814.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 51770 52645 . + . ID=gene-LDO38_RS21300;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=LDO38_RS21300;old_locus_tag=BVI2075_570054 NZ_CAJZAL010000160.1 Protein Homology CDS 51770 52645 . + 0 ID=cds-WP_011882815.1;Parent=gene-LDO38_RS21300;Dbxref=GenBank:WP_011882815.1;Name=WP_011882815.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195831.1;locus_tag=LDO38_RS21300;product=F0F1 ATP synthase subunit gamma;protein_id=WP_011882815.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 52711 54105 . + . ID=gene-LDO38_RS21305;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=LDO38_RS21305;old_locus_tag=BVI2075_570055 NZ_CAJZAL010000160.1 Protein Homology CDS 52711 54105 . + 0 ID=cds-WP_011882816.1;Parent=gene-LDO38_RS21305;Dbxref=GenBank:WP_011882816.1;Name=WP_011882816.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180028.1;locus_tag=LDO38_RS21305;product=F0F1 ATP synthase subunit beta;protein_id=WP_011882816.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 54266 54691 . + . ID=gene-LDO38_RS21310;Name=LDO38_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21310;old_locus_tag=BVI2075_570056 NZ_CAJZAL010000160.1 Protein Homology CDS 54266 54691 . + 0 ID=cds-WP_011882817.1;Parent=gene-LDO38_RS21310;Dbxref=GenBank:WP_011882817.1;Name=WP_011882817.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010107215.1;locus_tag=LDO38_RS21310;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_011882817.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 54949 56676 . + . ID=gene-LDO38_RS21315;Name=LDO38_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21315;old_locus_tag=BVI2075_570057 NZ_CAJZAL010000160.1 Protein Homology CDS 54949 56676 . + 0 ID=cds-WP_059669512.1;Parent=gene-LDO38_RS21315;Dbxref=GenBank:WP_059669512.1;Name=WP_059669512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895502.1;locus_tag=LDO38_RS21315;product=AMP-binding protein;protein_id=WP_059669512.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 57282 58106 . - . ID=gene-LDO38_RS21320;Name=LDO38_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21320;old_locus_tag=BVI2075_570059 NZ_CAJZAL010000160.1 Protein Homology CDS 57282 58106 . - 0 ID=cds-WP_059669511.1;Parent=gene-LDO38_RS21320;Dbxref=GenBank:WP_059669511.1;Name=WP_059669511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751773.1;locus_tag=LDO38_RS21320;product=transporter substrate-binding domain-containing protein;protein_id=WP_059669511.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 58253 59347 . + . ID=gene-LDO38_RS21325;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=LDO38_RS21325;old_locus_tag=BVI2075_570060 NZ_CAJZAL010000160.1 Protein Homology CDS 58253 59347 . + 0 ID=cds-WP_059460836.1;Parent=gene-LDO38_RS21325;Dbxref=GenBank:WP_059460836.1;Name=WP_059460836.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_043290608.1;locus_tag=LDO38_RS21325;product=uroporphyrinogen decarboxylase;protein_id=WP_059460836.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 59793 62054 . + . ID=gene-LDO38_RS21330;Name=LDO38_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21330;old_locus_tag=BVI2075_570062 NZ_CAJZAL010000160.1 Protein Homology CDS 59793 62054 . + 0 ID=cds-WP_059889147.1;Parent=gene-LDO38_RS21330;Dbxref=GenBank:WP_059889147.1;Name=WP_059889147.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554653.1;locus_tag=LDO38_RS21330;product=primosomal protein N';protein_id=WP_059889147.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 62394 66323 . + . ID=gene-LDO38_RS21335;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=LDO38_RS21335;old_locus_tag=BVI2075_570063 NZ_CAJZAL010000160.1 Protein Homology CDS 62394 66323 . + 0 ID=cds-WP_011882823.1;Parent=gene-LDO38_RS21335;Dbxref=GenBank:WP_011882823.1;Name=WP_011882823.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,L-glutamate gamma-semialdehyde dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600251.1;locus_tag=LDO38_RS21335;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_011882823.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 66408 67547 . + . ID=gene-LDO38_RS21340;Name=LDO38_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21340;old_locus_tag=BVI2075_570064 NZ_CAJZAL010000160.1 Protein Homology CDS 66408 67547 . + 0 ID=cds-WP_011882824.1;Parent=gene-LDO38_RS21340;Dbxref=GenBank:WP_011882824.1;Name=WP_011882824.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734190.1;locus_tag=LDO38_RS21340;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_011882824.1;transl_table=11 NZ_CAJZAL010000160.1 RefSeq gene 67668 69242 . - . ID=gene-LDO38_RS21345;Name=LDO38_RS21345;end_range=69242,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21345;old_locus_tag=BVI2075_570065;partial=true NZ_CAJZAL010000160.1 Protein Homology CDS 67668 69242 . - 0 ID=cds-WP_224056626.1;Parent=gene-LDO38_RS21345;Dbxref=GenBank:WP_224056626.1;Name=WP_224056626.1;Ontology_term=GO:0016627;end_range=69242,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254845.1;locus_tag=LDO38_RS21345;partial=true;product=acyl-CoA dehydrogenase family protein;protein_id=WP_224056626.1;transl_table=11 ##sequence-region NZ_CAJZAL010000161.1 1 74816 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000161.1 RefSeq region 1 74816 . + . ID=NZ_CAJZAL010000161.1:1..74816;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_58 NZ_CAJZAL010000161.1 RefSeq gene 185 696 . - . ID=gene-LDO38_RS21350;Name=LDO38_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21350;old_locus_tag=BVI2075_580002;partial=true;start_range=.,185 NZ_CAJZAL010000161.1 Protein Homology CDS 185 696 . - 0 ID=cds-WP_224056627.1;Parent=gene-LDO38_RS21350;Dbxref=GenBank:WP_224056627.1;Name=WP_224056627.1;Ontology_term=GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489696.1;locus_tag=LDO38_RS21350;partial=true;product=Maf family protein;protein_id=WP_224056627.1;start_range=.,185;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 957 1592 . + . ID=gene-LDO38_RS21355;Name=LDO38_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21355;old_locus_tag=BVI2075_580004 NZ_CAJZAL010000161.1 Protein Homology CDS 957 1592 . + 0 ID=cds-WP_011883952.1;Parent=gene-LDO38_RS21355;Dbxref=GenBank:WP_011883952.1;Name=WP_011883952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889985.1;locus_tag=LDO38_RS21355;product=DUF177 domain-containing protein;protein_id=WP_011883952.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 1691 1870 . + . ID=gene-LDO38_RS21360;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=LDO38_RS21360;old_locus_tag=BVI2075_580005 NZ_CAJZAL010000161.1 Protein Homology CDS 1691 1870 . + 0 ID=cds-WP_006051932.1;Parent=gene-LDO38_RS21360;Dbxref=GenBank:WP_006051932.1;Name=WP_006051932.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889986.1;locus_tag=LDO38_RS21360;product=50S ribosomal protein L32;protein_id=WP_006051932.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 2000 3106 . + . ID=gene-LDO38_RS21365;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=LDO38_RS21365;old_locus_tag=BVI2075_580006 NZ_CAJZAL010000161.1 Protein Homology CDS 2000 3106 . + 0 ID=cds-WP_011883953.1;Parent=gene-LDO38_RS21365;Dbxref=GenBank:WP_011883953.1;Name=WP_011883953.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764798.1;locus_tag=LDO38_RS21365;product=phosphate acyltransferase PlsX;protein_id=WP_011883953.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 3107 4096 . + . ID=gene-LDO38_RS21370;Name=LDO38_RS21370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21370;old_locus_tag=BVI2075_580007 NZ_CAJZAL010000161.1 Protein Homology CDS 3107 4096 . + 0 ID=cds-WP_011883955.1;Parent=gene-LDO38_RS21370;Dbxref=GenBank:WP_011883955.1;Name=WP_011883955.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010105339.1;locus_tag=LDO38_RS21370;product=beta-ketoacyl-ACP synthase III;protein_id=WP_011883955.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 4182 5114 . + . ID=gene-LDO38_RS21375;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=LDO38_RS21375;old_locus_tag=BVI2075_580008 NZ_CAJZAL010000161.1 Protein Homology CDS 4182 5114 . + 0 ID=cds-WP_011883957.1;Parent=gene-LDO38_RS21375;Dbxref=GenBank:WP_011883957.1;Name=WP_011883957.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025800.1;locus_tag=LDO38_RS21375;product=ACP S-malonyltransferase;protein_id=WP_011883957.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 5151 5900 . + . ID=gene-LDO38_RS21380;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=LDO38_RS21380;old_locus_tag=BVI2075_580009 NZ_CAJZAL010000161.1 Protein Homology CDS 5151 5900 . + 0 ID=cds-WP_011883958.1;Parent=gene-LDO38_RS21380;Dbxref=GenBank:WP_011883958.1;Name=WP_011883958.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192016.1;locus_tag=LDO38_RS21380;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_011883958.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 6045 6284 . + . ID=gene-LDO38_RS21385;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=LDO38_RS21385;old_locus_tag=BVI2075_580010 NZ_CAJZAL010000161.1 Protein Homology CDS 6045 6284 . + 0 ID=cds-WP_004197638.1;Parent=gene-LDO38_RS21385;Dbxref=GenBank:WP_004197638.1;Name=WP_004197638.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735022.1;locus_tag=LDO38_RS21385;product=acyl carrier protein;protein_id=WP_004197638.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 6449 7681 . + . ID=gene-LDO38_RS21390;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=LDO38_RS21390;old_locus_tag=BVI2075_580011 NZ_CAJZAL010000161.1 Protein Homology CDS 6449 7681 . + 0 ID=cds-WP_011883959.1;Parent=gene-LDO38_RS21390;Dbxref=GenBank:WP_011883959.1;Name=WP_011883959.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752488.1;locus_tag=LDO38_RS21390;product=beta-ketoacyl-ACP synthase II;protein_id=WP_011883959.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 7693 8157 . + . ID=gene-LDO38_RS21395;Name=LDO38_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21395;old_locus_tag=BVI2075_580012 NZ_CAJZAL010000161.1 Protein Homology CDS 7693 8157 . + 0 ID=cds-WP_014722720.1;Parent=gene-LDO38_RS21395;Dbxref=GenBank:WP_014722720.1;Name=WP_014722720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213793.1;locus_tag=LDO38_RS21395;product=hypothetical protein;protein_id=WP_014722720.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 8248 8847 . + . ID=gene-LDO38_RS21400;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=LDO38_RS21400;old_locus_tag=BVI2075_580013 NZ_CAJZAL010000161.1 Protein Homology CDS 8248 8847 . + 0 ID=cds-WP_011883961.1;Parent=gene-LDO38_RS21400;Dbxref=GenBank:WP_011883961.1;Name=WP_011883961.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883961.1;locus_tag=LDO38_RS21400;product=RNA polymerase sigma factor RpoE;protein_id=WP_011883961.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 8936 9553 . + . ID=gene-LDO38_RS21405;Name=LDO38_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21405;old_locus_tag=BVI2075_580014 NZ_CAJZAL010000161.1 Protein Homology CDS 8936 9553 . + 0 ID=cds-WP_011883962.1;Parent=gene-LDO38_RS21405;Dbxref=GenBank:WP_011883962.1;Name=WP_011883962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415543.1;locus_tag=LDO38_RS21405;product=sigma-E factor negative regulatory protein;protein_id=WP_011883962.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 9559 10611 . + . ID=gene-LDO38_RS21410;Name=LDO38_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21410;old_locus_tag=BVI2075_580015 NZ_CAJZAL010000161.1 Protein Homology CDS 9559 10611 . + 0 ID=cds-WP_011883963.1;Parent=gene-LDO38_RS21410;Dbxref=GenBank:WP_011883963.1;Name=WP_011883963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192760.1;locus_tag=LDO38_RS21410;product=MucB/RseB C-terminal domain-containing protein;protein_id=WP_011883963.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 10628 12121 . + . ID=gene-LDO38_RS21415;Name=LDO38_RS21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21415;old_locus_tag=BVI2075_580016 NZ_CAJZAL010000161.1 Protein Homology CDS 10628 12121 . + 0 ID=cds-WP_059460869.1;Parent=gene-LDO38_RS21415;Dbxref=GenBank:WP_059460869.1;Name=WP_059460869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363407.1;locus_tag=LDO38_RS21415;product=DegQ family serine endoprotease;protein_id=WP_059460869.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 12133 12369 . + . ID=gene-LDO38_RS21420;Name=LDO38_RS21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21420;old_locus_tag=BVI2075_580017 NZ_CAJZAL010000161.1 Protein Homology CDS 12133 12369 . + 0 ID=cds-WP_011883965.1;Parent=gene-LDO38_RS21420;Dbxref=GenBank:WP_011883965.1;Name=WP_011883965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476497.1;locus_tag=LDO38_RS21420;product=glutaredoxin family protein;protein_id=WP_011883965.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 12554 14347 . + . ID=gene-LDO38_RS21425;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=LDO38_RS21425;old_locus_tag=BVI2075_580018 NZ_CAJZAL010000161.1 Protein Homology CDS 12554 14347 . + 0 ID=cds-WP_011883966.1;Parent=gene-LDO38_RS21425;Dbxref=GenBank:WP_011883966.1;Name=WP_011883966.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897649.1;locus_tag=LDO38_RS21425;product=translation elongation factor 4;protein_id=WP_011883966.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 14364 15257 . + . ID=gene-LDO38_RS21430;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=LDO38_RS21430;old_locus_tag=BVI2075_580019 NZ_CAJZAL010000161.1 Protein Homology CDS 14364 15257 . + 0 ID=cds-WP_011883967.1;Parent=gene-LDO38_RS21430;Dbxref=GenBank:WP_011883967.1;Name=WP_011883967.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890017.1;locus_tag=LDO38_RS21430;product=signal peptidase I;protein_id=WP_011883967.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 15411 16664 . + . ID=gene-LDO38_RS21435;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=LDO38_RS21435;old_locus_tag=BVI2075_580020 NZ_CAJZAL010000161.1 Protein Homology CDS 15411 16664 . + 0 ID=cds-WP_034194218.1;Parent=gene-LDO38_RS21435;Dbxref=GenBank:WP_034194218.1;Name=WP_034194218.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408140.1;locus_tag=LDO38_RS21435;product=ribonuclease III;protein_id=WP_034194218.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 16725 17624 . + . ID=gene-LDO38_RS21440;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=LDO38_RS21440;old_locus_tag=BVI2075_580021 NZ_CAJZAL010000161.1 Protein Homology CDS 16725 17624 . + 0 ID=cds-WP_041493796.1;Parent=gene-LDO38_RS21440;Dbxref=GenBank:WP_041493796.1;Name=WP_041493796.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009913163.1;locus_tag=LDO38_RS21440;product=GTPase Era;protein_id=WP_041493796.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 17611 18450 . + . ID=gene-LDO38_RS21445;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=LDO38_RS21445;old_locus_tag=BVI2075_580022 NZ_CAJZAL010000161.1 Protein Homology CDS 17611 18450 . + 0 ID=cds-WP_011883970.1;Parent=gene-LDO38_RS21445;Dbxref=GenBank:WP_011883970.1;Name=WP_011883970.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351416.1;locus_tag=LDO38_RS21445;product=DNA repair protein RecO;protein_id=WP_011883970.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 18447 19223 . + . ID=gene-LDO38_RS21450;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=LDO38_RS21450;old_locus_tag=BVI2075_580023 NZ_CAJZAL010000161.1 Protein Homology CDS 18447 19223 . + 0 ID=cds-WP_011883971.1;Parent=gene-LDO38_RS21450;Dbxref=GenBank:WP_011883971.1;Name=WP_011883971.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762396.1;locus_tag=LDO38_RS21450;product=pyridoxine 5'-phosphate synthase;protein_id=WP_011883971.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 19293 19724 . + . ID=gene-LDO38_RS21455;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=LDO38_RS21455;old_locus_tag=BVI2075_580024 NZ_CAJZAL010000161.1 Protein Homology CDS 19293 19724 . + 0 ID=cds-WP_034194217.1;Parent=gene-LDO38_RS21455;Dbxref=GenBank:WP_034194217.1;Name=WP_034194217.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544946.1;locus_tag=LDO38_RS21455;product=holo-ACP synthase;protein_id=WP_034194217.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 19741 20769 . + . ID=gene-LDO38_RS21460;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=LDO38_RS21460;old_locus_tag=BVI2075_580025 NZ_CAJZAL010000161.1 Protein Homology CDS 19741 20769 . + 0 ID=cds-WP_069246180.1;Parent=gene-LDO38_RS21460;Dbxref=GenBank:WP_069246180.1;Name=WP_069246180.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897642.1;locus_tag=LDO38_RS21460;product=beta-N-acetylhexosaminidase;protein_id=WP_069246180.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 20921 22306 . - . ID=gene-LDO38_RS21465;Name=LDO38_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21465;old_locus_tag=BVI2075_580026 NZ_CAJZAL010000161.1 Protein Homology CDS 20921 22306 . - 0 ID=cds-WP_059695507.1;Parent=gene-LDO38_RS21465;Dbxref=GenBank:WP_059695507.1;Name=WP_059695507.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677,GO:0005524;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401253.1;locus_tag=LDO38_RS21465;product=sigma-54-dependent transcriptional regulator;protein_id=WP_059695507.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 22578 23135 . - . ID=gene-LDO38_RS21470;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=LDO38_RS21470;old_locus_tag=BVI2075_580027 NZ_CAJZAL010000161.1 Protein Homology CDS 22578 23135 . - 0 ID=cds-WP_011883975.1;Parent=gene-LDO38_RS21470;Dbxref=GenBank:WP_011883975.1;Name=WP_011883975.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883975.1;locus_tag=LDO38_RS21470;product=elongation factor P;protein_id=WP_011883975.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 23273 24484 . - . ID=gene-LDO38_RS21475;Name=earP;gbkey=Gene;gene=earP;gene_biotype=protein_coding;locus_tag=LDO38_RS21475;old_locus_tag=BVI2075_580028 NZ_CAJZAL010000161.1 Protein Homology CDS 23273 24484 . - 0 ID=cds-WP_069246181.1;Parent=gene-LDO38_RS21475;Dbxref=GenBank:WP_069246181.1;Name=WP_069246181.1;Ontology_term=GO:0106361;gbkey=CDS;gene=earP;go_function=protein-arginine rhamnosyltransferase activity|0106361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751870.1;locus_tag=LDO38_RS21475;product=elongation factor P maturation arginine rhamnosyltransferase EarP;protein_id=WP_069246181.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 24560 26599 . + . ID=gene-LDO38_RS21480;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=LDO38_RS21480;old_locus_tag=BVI2075_580030 NZ_CAJZAL010000161.1 Protein Homology CDS 24560 26599 . + 0 ID=cds-WP_059735225.1;Parent=gene-LDO38_RS21480;Dbxref=GenBank:WP_059735225.1;Name=WP_059735225.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544950.1;locus_tag=LDO38_RS21480;product=excinuclease ABC subunit UvrC;protein_id=WP_059735225.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 26711 27298 . + . ID=gene-LDO38_RS21485;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=LDO38_RS21485;old_locus_tag=BVI2075_580031 NZ_CAJZAL010000161.1 Protein Homology CDS 26711 27298 . + 0 ID=cds-WP_069246182.1;Parent=gene-LDO38_RS21485;Dbxref=GenBank:WP_069246182.1;Name=WP_069246182.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544951.1;locus_tag=LDO38_RS21485;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_069246182.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 27599 27672 . + . ID=gene-LDO38_RS21490;Name=LDO38_RS21490;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS21490;old_locus_tag=BVI2075_TRNA13 NZ_CAJZAL010000161.1 tRNAscan-SE tRNA 27599 27672 . + . ID=rna-LDO38_RS21490;Parent=gene-LDO38_RS21490;anticodon=(pos:27631..27633);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS21490;product=tRNA-Cys NZ_CAJZAL010000161.1 tRNAscan-SE exon 27599 27672 . + . ID=exon-LDO38_RS21490-1;Parent=rna-LDO38_RS21490;anticodon=(pos:27631..27633);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS21490;product=tRNA-Cys NZ_CAJZAL010000161.1 RefSeq gene 27847 28128 . + . ID=gene-LDO38_RS21495;Name=LDO38_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21495;old_locus_tag=BVI2075_580032 NZ_CAJZAL010000161.1 GeneMarkS-2+ CDS 27847 28128 . + 0 ID=cds-WP_224056628.1;Parent=gene-LDO38_RS21495;Dbxref=GenBank:WP_224056628.1;Name=WP_224056628.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS21495;product=hypothetical protein;protein_id=WP_224056628.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq pseudogene 28093 28285 . - . ID=gene-LDO38_RS21500;Name=LDO38_RS21500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS21500;partial=true;pseudo=true;start_range=.,28093 NZ_CAJZAL010000161.1 Protein Homology CDS 28093 28285 . - 0 ID=cds-LDO38_RS21500;Parent=gene-LDO38_RS21500;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611734.1;locus_tag=LDO38_RS21500;partial=true;product=transposase;pseudo=true;start_range=.,28093;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 28527 29111 . + . ID=gene-LDO38_RS21505;Name=LDO38_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21505;old_locus_tag=BVI2075_580036 NZ_CAJZAL010000161.1 GeneMarkS-2+ CDS 28527 29111 . + 0 ID=cds-WP_126220090.1;Parent=gene-LDO38_RS21505;Dbxref=GenBank:WP_126220090.1;Name=WP_126220090.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS21505;product=hypothetical protein;protein_id=WP_126220090.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 29302 30138 . + . ID=gene-LDO38_RS21510;Name=LDO38_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21510;old_locus_tag=BVI2075_580038 NZ_CAJZAL010000161.1 Protein Homology CDS 29302 30138 . + 0 ID=cds-WP_081059398.1;Parent=gene-LDO38_RS21510;Dbxref=GenBank:WP_081059398.1;Name=WP_081059398.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722733.1;locus_tag=LDO38_RS21510;product=FkbM family methyltransferase;protein_id=WP_081059398.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 30665 31186 . + . ID=gene-LDO38_RS21515;Name=LDO38_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21515 NZ_CAJZAL010000161.1 Protein Homology CDS 30665 31186 . + 0 ID=cds-WP_081056110.1;Parent=gene-LDO38_RS21515;Dbxref=GenBank:WP_081056110.1;Name=WP_081056110.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024479.6;locus_tag=LDO38_RS21515;product=DUF3916 domain-containing protein;protein_id=WP_081056110.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 31390 31689 . + . ID=gene-LDO38_RS21520;Name=LDO38_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21520;old_locus_tag=BVI2075_580042 NZ_CAJZAL010000161.1 GeneMarkS-2+ CDS 31390 31689 . + 0 ID=cds-WP_041493797.1;Parent=gene-LDO38_RS21520;Dbxref=GenBank:WP_041493797.1;Name=WP_041493797.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS21520;product=hypothetical protein;protein_id=WP_041493797.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 31849 32409 . + . ID=gene-LDO38_RS21525;Name=LDO38_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21525;old_locus_tag=BVI2075_580043 NZ_CAJZAL010000161.1 GeneMarkS-2+ CDS 31849 32409 . + 0 ID=cds-WP_146125928.1;Parent=gene-LDO38_RS21525;Dbxref=GenBank:WP_146125928.1;Name=WP_146125928.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS21525;product=hypothetical protein;protein_id=WP_146125928.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 32610 32725 . + . ID=gene-LDO38_RS21530;Name=LDO38_RS21530;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS21530 NZ_CAJZAL010000161.1 tRNAscan-SE tRNA 32610 32725 . + . ID=rna-LDO38_RS21530;Parent=gene-LDO38_RS21530;anticodon=(pos:32684..32686);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS21530;product=tRNA-Cys NZ_CAJZAL010000161.1 tRNAscan-SE exon 32610 32725 . + . ID=exon-LDO38_RS21530-1;Parent=rna-LDO38_RS21530;anticodon=(pos:32684..32686);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS21530;product=tRNA-Cys NZ_CAJZAL010000161.1 RefSeq gene 32817 33365 . - . ID=gene-LDO38_RS21535;Name=LDO38_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21535;old_locus_tag=BVI2075_580044 NZ_CAJZAL010000161.1 Protein Homology CDS 32817 33365 . - 0 ID=cds-WP_011883979.1;Parent=gene-LDO38_RS21535;Dbxref=GenBank:WP_011883979.1;Name=WP_011883979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482197.1;locus_tag=LDO38_RS21535;product=GNAT family N-acetyltransferase;protein_id=WP_011883979.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 33362 34027 . - . ID=gene-LDO38_RS21540;Name=LDO38_RS21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21540;old_locus_tag=BVI2075_580045 NZ_CAJZAL010000161.1 Protein Homology CDS 33362 34027 . - 0 ID=cds-WP_059460894.1;Parent=gene-LDO38_RS21540;Dbxref=GenBank:WP_059460894.1;Name=WP_059460894.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722736.1;locus_tag=LDO38_RS21540;product=helix-turn-helix domain-containing protein;protein_id=WP_059460894.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 34177 34413 . + . ID=gene-LDO38_RS21545;Name=LDO38_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21545;old_locus_tag=BVI2075_580046 NZ_CAJZAL010000161.1 Protein Homology CDS 34177 34413 . + 0 ID=cds-WP_014722737.1;Parent=gene-LDO38_RS21545;Dbxref=GenBank:WP_014722737.1;Name=WP_014722737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722737.1;locus_tag=LDO38_RS21545;product=ParD-like family protein;protein_id=WP_014722737.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 34413 35219 . + . ID=gene-LDO38_RS21550;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=LDO38_RS21550;old_locus_tag=BVI2075_580047 NZ_CAJZAL010000161.1 Protein Homology CDS 34413 35219 . + 0 ID=cds-WP_011883982.1;Parent=gene-LDO38_RS21550;Dbxref=GenBank:WP_011883982.1;Name=WP_011883982.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751860.1;locus_tag=LDO38_RS21550;product=type I methionyl aminopeptidase;protein_id=WP_011883982.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 35346 35858 . - . ID=gene-LDO38_RS21555;Name=LDO38_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21555;old_locus_tag=BVI2075_580049 NZ_CAJZAL010000161.1 Protein Homology CDS 35346 35858 . - 0 ID=cds-WP_034194211.1;Parent=gene-LDO38_RS21555;Dbxref=GenBank:WP_034194211.1;Name=WP_034194211.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883983.1;locus_tag=LDO38_RS21555;product=GAF domain-containing protein;protein_id=WP_034194211.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 36016 36933 . - . ID=gene-LDO38_RS21560;Name=LDO38_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21560;old_locus_tag=BVI2075_580050 NZ_CAJZAL010000161.1 Protein Homology CDS 36016 36933 . - 0 ID=cds-WP_059475873.1;Parent=gene-LDO38_RS21560;Dbxref=GenBank:WP_059475873.1;Name=WP_059475873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333193.1;locus_tag=LDO38_RS21560;product=LysR family transcriptional regulator;protein_id=WP_059475873.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 37044 37910 . + . ID=gene-LDO38_RS21565;Name=LDO38_RS21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21565;old_locus_tag=BVI2075_580051 NZ_CAJZAL010000161.1 Protein Homology CDS 37044 37910 . + 0 ID=cds-WP_069246183.1;Parent=gene-LDO38_RS21565;Dbxref=GenBank:WP_069246183.1;Name=WP_069246183.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532092.1;locus_tag=LDO38_RS21565;product=pirin family protein;protein_id=WP_069246183.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 38042 38533 . + . ID=gene-LDO38_RS21570;Name=LDO38_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21570;old_locus_tag=BVI2075_580052 NZ_CAJZAL010000161.1 Protein Homology CDS 38042 38533 . + 0 ID=cds-WP_059735221.1;Parent=gene-LDO38_RS21570;Dbxref=GenBank:WP_059735221.1;Name=WP_059735221.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897627.1;locus_tag=LDO38_RS21570;product=GNAT family N-acetyltransferase;protein_id=WP_059735221.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 38556 39428 . - . ID=gene-LDO38_RS21575;Name=LDO38_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21575;old_locus_tag=BVI2075_580053 NZ_CAJZAL010000161.1 Protein Homology CDS 38556 39428 . - 0 ID=cds-WP_011883987.1;Parent=gene-LDO38_RS21575;Dbxref=GenBank:WP_011883987.1;Name=WP_011883987.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009955133.1;locus_tag=LDO38_RS21575;product=cytochrome c oxidase assembly protein;protein_id=WP_011883987.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 39439 39885 . - . ID=gene-LDO38_RS21580;Name=LDO38_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21580;old_locus_tag=BVI2075_580054 NZ_CAJZAL010000161.1 Protein Homology CDS 39439 39885 . - 0 ID=cds-WP_011883988.1;Parent=gene-LDO38_RS21580;Dbxref=GenBank:WP_011883988.1;Name=WP_011883988.1;Ontology_term=GO:0016531;gbkey=CDS;go_function=copper chaperone activity|0016531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476464.1;locus_tag=LDO38_RS21580;product=copper chaperone PCu(A)C;protein_id=WP_011883988.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 39893 40537 . - . ID=gene-LDO38_RS21585;Name=LDO38_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21585;old_locus_tag=BVI2075_580055 NZ_CAJZAL010000161.1 Protein Homology CDS 39893 40537 . - 0 ID=cds-WP_014722744.1;Parent=gene-LDO38_RS21585;Dbxref=GenBank:WP_014722744.1;Name=WP_014722744.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544964.1;locus_tag=LDO38_RS21585;product=SCO family protein;protein_id=WP_014722744.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 40809 41561 . + . ID=gene-LDO38_RS21590;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=LDO38_RS21590;old_locus_tag=BVI2075_580057 NZ_CAJZAL010000161.1 Protein Homology CDS 40809 41561 . + 0 ID=cds-WP_011883990.1;Parent=gene-LDO38_RS21590;Dbxref=GenBank:WP_011883990.1;Name=WP_011883990.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213775.1;locus_tag=LDO38_RS21590;product=trehalose-phosphatase;protein_id=WP_011883990.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 41558 42934 . + . ID=gene-LDO38_RS21595;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=LDO38_RS21595;old_locus_tag=BVI2075_580058 NZ_CAJZAL010000161.1 Protein Homology CDS 41558 42934 . + 0 ID=cds-WP_069246185.1;Parent=gene-LDO38_RS21595;Dbxref=GenBank:WP_069246185.1;Name=WP_069246185.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476461.1;locus_tag=LDO38_RS21595;product=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming);protein_id=WP_069246185.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 43050 44882 . - . ID=gene-LDO38_RS21600;Name=LDO38_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21600;old_locus_tag=BVI2075_580059 NZ_CAJZAL010000161.1 Protein Homology CDS 43050 44882 . - 0 ID=cds-WP_011883992.1;Parent=gene-LDO38_RS21600;Dbxref=GenBank:WP_011883992.1;Name=WP_011883992.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401234.1;locus_tag=LDO38_RS21600;product=ABC transporter ATP-binding protein;protein_id=WP_011883992.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 45464 46528 . + . ID=gene-LDO38_RS21605;Name=LDO38_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21605;old_locus_tag=BVI2075_580060 NZ_CAJZAL010000161.1 Protein Homology CDS 45464 46528 . + 0 ID=cds-WP_011883993.1;Parent=gene-LDO38_RS21605;Dbxref=GenBank:WP_011883993.1;Name=WP_011883993.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527452.1;locus_tag=LDO38_RS21605;product=glycosyltransferase family 4 protein;protein_id=WP_011883993.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 46775 47575 . + . ID=gene-LDO38_RS21610;Name=LDO38_RS21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21610;old_locus_tag=BVI2075_580062 NZ_CAJZAL010000161.1 Protein Homology CDS 46775 47575 . + 0 ID=cds-WP_011883994.1;Parent=gene-LDO38_RS21610;Dbxref=GenBank:WP_011883994.1;Name=WP_011883994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751848.1;locus_tag=LDO38_RS21610;product=hypothetical protein;protein_id=WP_011883994.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 47613 48077 . + . ID=gene-LDO38_RS21615;Name=LDO38_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21615;old_locus_tag=BVI2075_580063 NZ_CAJZAL010000161.1 Protein Homology CDS 47613 48077 . + 0 ID=cds-WP_011883995.1;Parent=gene-LDO38_RS21615;Dbxref=GenBank:WP_011883995.1;Name=WP_011883995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476457.1;locus_tag=LDO38_RS21615;product=DUF2214 family protein;protein_id=WP_011883995.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 48166 49518 . - . ID=gene-LDO38_RS21620;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=LDO38_RS21620;old_locus_tag=BVI2075_580064 NZ_CAJZAL010000161.1 Protein Homology CDS 48166 49518 . - 0 ID=cds-WP_011883996.1;Parent=gene-LDO38_RS21620;Dbxref=GenBank:WP_011883996.1;Name=WP_011883996.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764752.1;locus_tag=LDO38_RS21620;product=glucarate dehydratase;protein_id=WP_011883996.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 49942 50703 . + . ID=gene-LDO38_RS21625;Name=LDO38_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21625;old_locus_tag=BVI2075_580065 NZ_CAJZAL010000161.1 Protein Homology CDS 49942 50703 . + 0 ID=cds-WP_011883997.1;Parent=gene-LDO38_RS21625;Dbxref=GenBank:WP_011883997.1;Name=WP_011883997.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883997.1;locus_tag=LDO38_RS21625;product=FadR/GntR family transcriptional regulator;protein_id=WP_011883997.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 50919 52067 . - . ID=gene-LDO38_RS21630;Name=LDO38_RS21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21630;old_locus_tag=BVI2075_580066 NZ_CAJZAL010000161.1 Protein Homology CDS 50919 52067 . - 0 ID=cds-WP_011883998.1;Parent=gene-LDO38_RS21630;Dbxref=GenBank:WP_011883998.1;Name=WP_011883998.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497706.1;locus_tag=LDO38_RS21630;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_011883998.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 52454 54598 . - . ID=gene-LDO38_RS21635;Name=LDO38_RS21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21635;old_locus_tag=BVI2075_580067 NZ_CAJZAL010000161.1 Protein Homology CDS 52454 54598 . - 0 ID=cds-WP_060122656.1;Parent=gene-LDO38_RS21635;Dbxref=GenBank:WP_060122656.1;Name=WP_060122656.1;Ontology_term=GO:0034480;gbkey=CDS;go_function=phosphatidylcholine phospholipase C activity|0034480||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484309.1;locus_tag=LDO38_RS21635;product=phosphocholine-specific phospholipase C;protein_id=WP_060122656.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 54883 55743 . - . ID=gene-LDO38_RS21640;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=LDO38_RS21640;old_locus_tag=BVI2075_580068 NZ_CAJZAL010000161.1 Protein Homology CDS 54883 55743 . - 0 ID=cds-WP_011884000.1;Parent=gene-LDO38_RS21640;Dbxref=GenBank:WP_011884000.1;Name=WP_011884000.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884000.1;locus_tag=LDO38_RS21640;product=pyridoxal kinase PdxY;protein_id=WP_011884000.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 55919 56977 . + . ID=gene-LDO38_RS21645;Name=LDO38_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21645;old_locus_tag=BVI2075_580069 NZ_CAJZAL010000161.1 Protein Homology CDS 55919 56977 . + 0 ID=cds-WP_059568536.1;Parent=gene-LDO38_RS21645;Dbxref=GenBank:WP_059568536.1;Name=WP_059568536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884001.1;locus_tag=LDO38_RS21645;product=alpha/beta fold hydrolase;protein_id=WP_059568536.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 57038 58036 . - . ID=gene-LDO38_RS21650;Name=LDO38_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21650;old_locus_tag=BVI2075_580070 NZ_CAJZAL010000161.1 Protein Homology CDS 57038 58036 . - 0 ID=cds-WP_011884003.1;Parent=gene-LDO38_RS21650;Dbxref=GenBank:WP_011884003.1;Name=WP_011884003.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656385.1;locus_tag=LDO38_RS21650;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_011884003.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 58675 59847 . + . ID=gene-LDO38_RS21655;Name=hpnI;gbkey=Gene;gene=hpnI;gene_biotype=protein_coding;locus_tag=LDO38_RS21655;old_locus_tag=BVI2075_580071 NZ_CAJZAL010000161.1 Protein Homology CDS 58675 59847 . + 0 ID=cds-WP_059455548.1;Parent=gene-LDO38_RS21655;Dbxref=GenBank:WP_059455548.1;Name=WP_059455548.1;Ontology_term=GO:0016757;gbkey=CDS;gene=hpnI;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884009.1;locus_tag=LDO38_RS21655;product=bacteriohopanetetrol glucosamine biosynthesis glycosyltransferase HpnI;protein_id=WP_059455548.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 60009 61454 . + . ID=gene-LDO38_RS21660;Name=hpnJ;gbkey=Gene;gene=hpnJ;gene_biotype=protein_coding;locus_tag=LDO38_RS21660;old_locus_tag=BVI2075_580072 NZ_CAJZAL010000161.1 Protein Homology CDS 60009 61454 . + 0 ID=cds-WP_306306641.1;Parent=gene-LDO38_RS21660;Dbxref=GenBank:WP_306306641.1;Name=WP_306306641.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;gene=hpnJ;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004552371.1;locus_tag=LDO38_RS21660;product=hopanoid biosynthesis associated radical SAM protein HpnJ;protein_id=WP_306306641.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 61458 62342 . + . ID=gene-LDO38_RS21665;Name=hpnK;gbkey=Gene;gene=hpnK;gene_biotype=protein_coding;locus_tag=LDO38_RS21665;old_locus_tag=BVI2075_580073 NZ_CAJZAL010000161.1 Protein Homology CDS 61458 62342 . + 0 ID=cds-WP_059475878.1;Parent=gene-LDO38_RS21665;Dbxref=GenBank:WP_059475878.1;Name=WP_059475878.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=hpnK;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401218.1;locus_tag=LDO38_RS21665;product=hopanoid biosynthesis-associated protein HpnK;protein_id=WP_059475878.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 62339 63382 . + . ID=gene-LDO38_RS21670;Name=LDO38_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21670;old_locus_tag=BVI2075_580074 NZ_CAJZAL010000161.1 Protein Homology CDS 62339 63382 . + 0 ID=cds-WP_014722753.1;Parent=gene-LDO38_RS21670;Dbxref=GenBank:WP_014722753.1;Name=WP_014722753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213764.1;locus_tag=LDO38_RS21670;product=lysylphosphatidylglycerol synthase domain-containing protein;protein_id=WP_014722753.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 63471 64025 . + . ID=gene-LDO38_RS21675;Name=LDO38_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21675;old_locus_tag=BVI2075_580075 NZ_CAJZAL010000161.1 Protein Homology CDS 63471 64025 . + 0 ID=cds-WP_011884016.1;Parent=gene-LDO38_RS21675;Dbxref=GenBank:WP_011884016.1;Name=WP_011884016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333215.1;locus_tag=LDO38_RS21675;product=hypothetical protein;protein_id=WP_011884016.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 64292 64981 . + . ID=gene-LDO38_RS21680;Name=LDO38_RS21680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21680;old_locus_tag=BVI2075_580078 NZ_CAJZAL010000161.1 Protein Homology CDS 64292 64981 . + 0 ID=cds-WP_011884017.1;Parent=gene-LDO38_RS21680;Dbxref=GenBank:WP_011884017.1;Name=WP_011884017.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527442.1;locus_tag=LDO38_RS21680;product=ABC transporter permease;protein_id=WP_011884017.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 64978 65691 . + . ID=gene-LDO38_RS21685;Name=LDO38_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21685;old_locus_tag=BVI2075_580077 NZ_CAJZAL010000161.1 Protein Homology CDS 64978 65691 . + 0 ID=cds-WP_011884019.1;Parent=gene-LDO38_RS21685;Dbxref=GenBank:WP_011884019.1;Name=WP_011884019.1;Ontology_term=GO:0022857,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424506.1;locus_tag=LDO38_RS21685;product=ABC transporter permease;protein_id=WP_011884019.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 65713 66513 . + . ID=gene-LDO38_RS21690;Name=LDO38_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21690;old_locus_tag=BVI2075_580079 NZ_CAJZAL010000161.1 Protein Homology CDS 65713 66513 . + 0 ID=cds-WP_011884020.1;Parent=gene-LDO38_RS21690;Dbxref=GenBank:WP_011884020.1;Name=WP_011884020.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254933.1;locus_tag=LDO38_RS21690;product=ABC transporter ATP-binding protein;protein_id=WP_011884020.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 66534 67574 . + . ID=gene-LDO38_RS21695;Name=LDO38_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21695;old_locus_tag=BVI2075_580080 NZ_CAJZAL010000161.1 Protein Homology CDS 66534 67574 . + 0 ID=cds-WP_011884021.1;Parent=gene-LDO38_RS21695;Dbxref=GenBank:WP_011884021.1;Name=WP_011884021.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408165.1;locus_tag=LDO38_RS21695;product=GlxA family transcriptional regulator;protein_id=WP_011884021.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 68458 69690 . + . ID=gene-LDO38_RS21700;Name=LDO38_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21700;old_locus_tag=BVI2075_580083 NZ_CAJZAL010000161.1 Protein Homology CDS 68458 69690 . + 0 ID=cds-WP_046422469.1;Parent=gene-LDO38_RS21700;Dbxref=GenBank:WP_046422469.1;Name=WP_046422469.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755011.1;locus_tag=LDO38_RS21700;product=aspartate aminotransferase family protein;protein_id=WP_046422469.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 69721 70797 . + . ID=gene-LDO38_RS21705;Name=aruF;gbkey=Gene;gene=aruF;gene_biotype=protein_coding;locus_tag=LDO38_RS21705;old_locus_tag=BVI2075_580084 NZ_CAJZAL010000161.1 Protein Homology CDS 69721 70797 . + 0 ID=cds-WP_046422471.1;Parent=gene-LDO38_RS21705;Dbxref=GenBank:WP_046422471.1;Name=WP_046422471.1;gbkey=CDS;gene=aruF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524646.1;locus_tag=LDO38_RS21705;product=arginine/ornithine succinyltransferase subunit alpha;protein_id=WP_046422471.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 70794 71825 . + . ID=gene-LDO38_RS21710;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=LDO38_RS21710;old_locus_tag=BVI2075_580085 NZ_CAJZAL010000161.1 Protein Homology CDS 70794 71825 . + 0 ID=cds-WP_011884025.1;Parent=gene-LDO38_RS21710;Dbxref=GenBank:WP_011884025.1;Name=WP_011884025.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009931289.1;locus_tag=LDO38_RS21710;product=arginine N-succinyltransferase;protein_id=WP_011884025.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 71833 73296 . + . ID=gene-LDO38_RS21715;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=LDO38_RS21715;old_locus_tag=BVI2075_580086 NZ_CAJZAL010000161.1 Protein Homology CDS 71833 73296 . + 0 ID=cds-WP_014722756.1;Parent=gene-LDO38_RS21715;Dbxref=GenBank:WP_014722756.1;Name=WP_014722756.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656401.1;locus_tag=LDO38_RS21715;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_014722756.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq gene 73311 74651 . + . ID=gene-LDO38_RS21720;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=LDO38_RS21720;old_locus_tag=BVI2075_580087 NZ_CAJZAL010000161.1 Protein Homology CDS 73311 74651 . + 0 ID=cds-WP_124260154.1;Parent=gene-LDO38_RS21720;Dbxref=GenBank:WP_124260154.1;Name=WP_124260154.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025855.1;locus_tag=LDO38_RS21720;product=N-succinylarginine dihydrolase;protein_id=WP_124260154.1;transl_table=11 NZ_CAJZAL010000161.1 RefSeq pseudogene 74659 74816 . + . ID=gene-LDO38_RS21725;Name=LDO38_RS21725;end_range=74816,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS21725;partial=true;pseudo=true NZ_CAJZAL010000161.1 Protein Homology CDS 74659 74816 . + 0 ID=cds-LDO38_RS21725;Parent=gene-LDO38_RS21725;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=74816,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328183.1;locus_tag=LDO38_RS21725;partial=true;product=succinylglutamate desuccinylase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000162.1 1 24153 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000162.1 RefSeq region 1 24153 . + . ID=NZ_CAJZAL010000162.1:1..24153;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_59 NZ_CAJZAL010000162.1 RefSeq gene 259 414 . + . ID=gene-LDO38_RS21730;Name=LDO38_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21730 NZ_CAJZAL010000162.1 Protein Homology CDS 259 414 . + 0 ID=cds-WP_014725740.1;Parent=gene-LDO38_RS21730;Dbxref=GenBank:WP_014725740.1;Name=WP_014725740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398990.1;locus_tag=LDO38_RS21730;product=hypothetical protein;protein_id=WP_014725740.1;transl_table=11 NZ_CAJZAL010000162.1 RefSeq pseudogene 676 906 . + . ID=gene-LDO38_RS21735;Name=LDO38_RS21735;end_range=906,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS21735;partial=true;pseudo=true NZ_CAJZAL010000162.1 Protein Homology CDS 676 906 . + 0 ID=cds-LDO38_RS21735;Parent=gene-LDO38_RS21735;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=906,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217731.1;locus_tag=LDO38_RS21735;partial=true;product=manganese catalase family protein;pseudo=true;transl_table=11 NZ_CAJZAL010000162.1 RefSeq gene 1119 2408 . - . ID=gene-LDO38_RS21740;Name=LDO38_RS21740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21740;old_locus_tag=BVI2075_590004 NZ_CAJZAL010000162.1 Protein Homology CDS 1119 2408 . - 0 ID=cds-WP_224056629.1;Parent=gene-LDO38_RS21740;Dbxref=GenBank:WP_224056629.1;Name=WP_224056629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725738.1;locus_tag=LDO38_RS21740;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_224056629.1;transl_table=11 NZ_CAJZAL010000162.1 RefSeq gene 2457 3782 . - . ID=gene-LDO38_RS21745;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=LDO38_RS21745;old_locus_tag=BVI2075_590005 NZ_CAJZAL010000162.1 Protein Homology CDS 2457 3782 . - 0 ID=cds-WP_059740441.1;Parent=gene-LDO38_RS21745;Dbxref=GenBank:WP_059740441.1;Name=WP_059740441.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007580949.1;locus_tag=LDO38_RS21745;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_059740441.1;transl_table=11 NZ_CAJZAL010000162.1 RefSeq gene 3930 4838 . + . ID=gene-LDO38_RS21750;Name=LDO38_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21750;old_locus_tag=BVI2075_590006 NZ_CAJZAL010000162.1 Protein Homology CDS 3930 4838 . + 0 ID=cds-WP_034192821.1;Parent=gene-LDO38_RS21750;Dbxref=GenBank:WP_034192821.1;Name=WP_034192821.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725736.1;locus_tag=LDO38_RS21750;product=LysR family transcriptional regulator;protein_id=WP_034192821.1;transl_table=11 NZ_CAJZAL010000162.1 RefSeq gene 5188 6177 . + . ID=gene-LDO38_RS21755;Name=LDO38_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21755;old_locus_tag=BVI2075_590007 NZ_CAJZAL010000162.1 Protein Homology CDS 5188 6177 . + 0 ID=cds-WP_212172345.1;Parent=gene-LDO38_RS21755;Dbxref=GenBank:WP_212172345.1;Name=WP_212172345.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725735.1;locus_tag=LDO38_RS21755;product=c-type cytochrome;protein_id=WP_212172345.1;transl_table=11 NZ_CAJZAL010000162.1 RefSeq gene 6191 8689 . + . ID=gene-LDO38_RS21760;Name=LDO38_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21760;old_locus_tag=BVI2075_590008 NZ_CAJZAL010000162.1 Protein Homology CDS 6191 8689 . + 0 ID=cds-WP_224056631.1;Parent=gene-LDO38_RS21760;Dbxref=GenBank:WP_224056631.1;Name=WP_224056631.1;Ontology_term=GO:0009060,GO:0004129,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA,heme binding|0020037||IEA;go_process=aerobic respiration|0009060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725734.1;locus_tag=LDO38_RS21760;product=cbb3-type cytochrome c oxidase subunit I;protein_id=WP_224056631.1;transl_table=11 NZ_CAJZAL010000162.1 RefSeq gene 8674 8802 . + . ID=gene-LDO38_RS30110;Name=LDO38_RS30110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30110;old_locus_tag=BVI2075_590009 NZ_CAJZAL010000162.1 GeneMarkS-2+ CDS 8674 8802 . + 0 ID=cds-WP_279613031.1;Parent=gene-LDO38_RS30110;Dbxref=GenBank:WP_279613031.1;Name=WP_279613031.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30110;product=hypothetical protein;protein_id=WP_279613031.1;transl_table=11 NZ_CAJZAL010000162.1 RefSeq gene 9179 9577 . - . ID=gene-LDO38_RS21770;Name=LDO38_RS21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21770;old_locus_tag=BVI2075_590011 NZ_CAJZAL010000162.1 Protein Homology CDS 9179 9577 . - 0 ID=cds-WP_014725731.1;Parent=gene-LDO38_RS21770;Dbxref=GenBank:WP_014725731.1;Name=WP_014725731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407856.1;locus_tag=LDO38_RS21770;product=RidA family protein;protein_id=WP_014725731.1;transl_table=11 NZ_CAJZAL010000162.1 RefSeq gene 9658 10434 . - . ID=gene-LDO38_RS21775;Name=benD;gbkey=Gene;gene=benD;gene_biotype=protein_coding;locus_tag=LDO38_RS21775;old_locus_tag=BVI2075_590012 NZ_CAJZAL010000162.1 Protein Homology CDS 9658 10434 . - 0 ID=cds-WP_014725730.1;Parent=gene-LDO38_RS21775;Dbxref=GenBank:WP_014725730.1;Name=WP_014725730.1;gbkey=CDS;gene=benD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336679.1;locus_tag=LDO38_RS21775;product=benzoate diol dehydrogenase BenD;protein_id=WP_014725730.1;transl_table=11 NZ_CAJZAL010000162.1 RefSeq gene 10431 11453 . - . ID=gene-LDO38_RS21780;Name=benC;gbkey=Gene;gene=benC;gene_biotype=protein_coding;locus_tag=LDO38_RS21780;old_locus_tag=BVI2075_590013 NZ_CAJZAL010000162.1 Protein Homology CDS 10431 11453 . - 0 ID=cds-WP_224056632.1;Parent=gene-LDO38_RS21780;Dbxref=GenBank:WP_224056632.1;Name=WP_224056632.1;gbkey=CDS;gene=benC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485361.1;locus_tag=LDO38_RS21780;product=benzoate 1%2C2-dioxygenase electron transfer component BenC;protein_id=WP_224056632.1;transl_table=11 NZ_CAJZAL010000162.1 RefSeq gene 11492 11980 . - . ID=gene-LDO38_RS21785;Name=benB;gbkey=Gene;gene=benB;gene_biotype=protein_coding;locus_tag=LDO38_RS21785;old_locus_tag=BVI2075_590014 NZ_CAJZAL010000162.1 Protein Homology CDS 11492 11980 . - 0 ID=cds-WP_011879963.1;Parent=gene-LDO38_RS21785;Dbxref=GenBank:WP_011879963.1;Name=WP_011879963.1;Ontology_term=GO:0008152;gbkey=CDS;gene=benB;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011695017.1;locus_tag=LDO38_RS21785;product=benzoate 1%2C2-dioxygenase small subunit;protein_id=WP_011879963.1;transl_table=11 NZ_CAJZAL010000162.1 RefSeq gene 11977 13335 . - . ID=gene-LDO38_RS21790;Name=LDO38_RS21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21790;old_locus_tag=BVI2075_590015 NZ_CAJZAL010000162.1 Protein Homology CDS 11977 13335 . - 0 ID=cds-WP_176043730.1;Parent=gene-LDO38_RS21790;Dbxref=GenBank:WP_176043730.1;Name=WP_176043730.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661450.1;locus_tag=LDO38_RS21790;product=Rieske 2Fe-2S domain-containing protein;protein_id=WP_176043730.1;transl_table=11 NZ_CAJZAL010000162.1 RefSeq gene 13447 14391 . - . ID=gene-LDO38_RS21795;Name=catA;gbkey=Gene;gene=catA;gene_biotype=protein_coding;locus_tag=LDO38_RS21795;old_locus_tag=BVI2075_590016 NZ_CAJZAL010000162.1 Protein Homology CDS 13447 14391 . - 0 ID=cds-WP_059456216.1;Parent=gene-LDO38_RS21795;Dbxref=GenBank:WP_059456216.1;Name=WP_059456216.1;Ontology_term=GO:0019615,GO:0005506,GO:0018576;gbkey=CDS;gene=catA;go_function=iron ion binding|0005506||IEA,catechol 1%2C2-dioxygenase activity|0018576||IEA;go_process=catechol catabolic process%2C ortho-cleavage|0019615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008919234.1;locus_tag=LDO38_RS21795;product=catechol 1%2C2-dioxygenase;protein_id=WP_059456216.1;transl_table=11 NZ_CAJZAL010000162.1 RefSeq gene 15287 16471 . - . ID=gene-LDO38_RS21800;Name=LDO38_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21800;old_locus_tag=BVI2075_590017 NZ_CAJZAL010000162.1 Protein Homology CDS 15287 16471 . - 0 ID=cds-WP_059694124.1;Parent=gene-LDO38_RS21800;Dbxref=GenBank:WP_059694124.1;Name=WP_059694124.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758807.1;locus_tag=LDO38_RS21800;product=sugar transporter;protein_id=WP_059694124.1;transl_table=11 NZ_CAJZAL010000162.1 RefSeq gene 16691 17365 . + . ID=gene-LDO38_RS21805;Name=LDO38_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21805;old_locus_tag=BVI2075_590018 NZ_CAJZAL010000162.1 Protein Homology CDS 16691 17365 . + 0 ID=cds-WP_011879959.1;Parent=gene-LDO38_RS21805;Dbxref=GenBank:WP_011879959.1;Name=WP_011879959.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008347718.1;locus_tag=LDO38_RS21805;product=HAD family hydrolase;protein_id=WP_011879959.1;transl_table=11 NZ_CAJZAL010000162.1 RefSeq gene 17652 18359 . - . ID=gene-LDO38_RS21810;Name=LDO38_RS21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21810;old_locus_tag=BVI2075_590020 NZ_CAJZAL010000162.1 Protein Homology CDS 17652 18359 . - 0 ID=cds-WP_041494359.1;Parent=gene-LDO38_RS21810;Dbxref=GenBank:WP_041494359.1;Name=WP_041494359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009961057.1;locus_tag=LDO38_RS21810;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=WP_041494359.1;transl_table=11 NZ_CAJZAL010000162.1 RefSeq gene 18459 18701 . - . ID=gene-LDO38_RS21815;Name=LDO38_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21815;old_locus_tag=BVI2075_590021 NZ_CAJZAL010000162.1 Protein Homology CDS 18459 18701 . - 0 ID=cds-WP_011879957.1;Parent=gene-LDO38_RS21815;Dbxref=GenBank:WP_011879957.1;Name=WP_011879957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372628.1;locus_tag=LDO38_RS21815;product=DUF6566 family protein;protein_id=WP_011879957.1;transl_table=11 NZ_CAJZAL010000162.1 RefSeq gene 18879 19580 . + . ID=gene-LDO38_RS21820;Name=LDO38_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21820;old_locus_tag=BVI2075_590024 NZ_CAJZAL010000162.1 Protein Homology CDS 18879 19580 . + 0 ID=cds-WP_059740436.1;Parent=gene-LDO38_RS21820;Dbxref=GenBank:WP_059740436.1;Name=WP_059740436.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405126.1;locus_tag=LDO38_RS21820;product=MgtC/SapB family protein;protein_id=WP_059740436.1;transl_table=11 NZ_CAJZAL010000162.1 RefSeq gene 19577 19915 . + . ID=gene-LDO38_RS21825;Name=LDO38_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21825;old_locus_tag=BVI2075_590023 NZ_CAJZAL010000162.1 Protein Homology CDS 19577 19915 . + 0 ID=cds-WP_224056633.1;Parent=gene-LDO38_RS21825;Dbxref=GenBank:WP_224056633.1;Name=WP_224056633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405125.1;locus_tag=LDO38_RS21825;product=hypothetical protein;protein_id=WP_224056633.1;transl_table=11 NZ_CAJZAL010000162.1 RefSeq gene 19912 22131 . + . ID=gene-LDO38_RS21830;Name=LDO38_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21830;old_locus_tag=BVI2075_590025 NZ_CAJZAL010000162.1 Protein Homology CDS 19912 22131 . + 0 ID=cds-WP_059897215.1;Parent=gene-LDO38_RS21830;Dbxref=GenBank:WP_059897215.1;Name=WP_059897215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417153.1;locus_tag=LDO38_RS21830;product=VTT domain-containing protein;protein_id=WP_059897215.1;transl_table=11 NZ_CAJZAL010000162.1 RefSeq gene 22122 22913 . + . ID=gene-LDO38_RS21835;Name=LDO38_RS21835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21835;old_locus_tag=BVI2075_590026 NZ_CAJZAL010000162.1 Protein Homology CDS 22122 22913 . + 0 ID=cds-WP_176300322.1;Parent=gene-LDO38_RS21835;Dbxref=GenBank:WP_176300322.1;Name=WP_176300322.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725722.1;locus_tag=LDO38_RS21835;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_176300322.1;transl_table=11 NZ_CAJZAL010000162.1 RefSeq gene 22951 23439 . + . ID=gene-LDO38_RS21840;Name=LDO38_RS21840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21840;old_locus_tag=BVI2075_590027 NZ_CAJZAL010000162.1 Protein Homology CDS 22951 23439 . + 0 ID=cds-WP_014725721.1;Parent=gene-LDO38_RS21840;Dbxref=GenBank:WP_014725721.1;Name=WP_014725721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217901.1;locus_tag=LDO38_RS21840;product=phage protein NinX family protein;protein_id=WP_014725721.1;transl_table=11 NZ_CAJZAL010000162.1 RefSeq pseudogene 23635 24153 . + . ID=gene-LDO38_RS21845;Name=LDO38_RS21845;end_range=24153,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS21845;partial=true;pseudo=true NZ_CAJZAL010000162.1 Protein Homology CDS 23635 24153 . + 0 ID=cds-LDO38_RS21845;Parent=gene-LDO38_RS21845;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=24153,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498311.1;locus_tag=LDO38_RS21845;partial=true;product=DUF3416 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000163.1 1 71358 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000163.1 RefSeq region 1 71358 . + . ID=NZ_CAJZAL010000163.1:1..71358;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_6 NZ_CAJZAL010000163.1 RefSeq gene 234 632 . - . ID=gene-LDO38_RS21850;Name=LDO38_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21850;old_locus_tag=BVI2075_60002 NZ_CAJZAL010000163.1 Protein Homology CDS 234 632 . - 0 ID=cds-WP_011882595.1;Parent=gene-LDO38_RS21850;Dbxref=GenBank:WP_011882595.1;Name=WP_011882595.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754334.1;locus_tag=LDO38_RS21850;product=winged helix-turn-helix domain-containing protein;protein_id=WP_011882595.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 995 3205 . - . ID=gene-LDO38_RS21855;Name=LDO38_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21855;old_locus_tag=BVI2075_60003 NZ_CAJZAL010000163.1 Protein Homology CDS 995 3205 . - 0 ID=cds-WP_014725393.1;Parent=gene-LDO38_RS21855;Dbxref=GenBank:WP_014725393.1;Name=WP_014725393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659201.1;locus_tag=LDO38_RS21855;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;protein_id=WP_014725393.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 3208 3669 . - . ID=gene-LDO38_RS21860;Name=LDO38_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21860;old_locus_tag=BVI2075_60004 NZ_CAJZAL010000163.1 Protein Homology CDS 3208 3669 . - 0 ID=cds-WP_059460938.1;Parent=gene-LDO38_RS21860;Dbxref=GenBank:WP_059460938.1;Name=WP_059460938.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017328867.1;locus_tag=LDO38_RS21860;product=(2Fe-2S)-binding protein;protein_id=WP_059460938.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 3849 4775 . + . ID=gene-LDO38_RS21865;Name=LDO38_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21865;old_locus_tag=BVI2075_60005 NZ_CAJZAL010000163.1 Protein Homology CDS 3849 4775 . + 0 ID=cds-WP_034194301.1;Parent=gene-LDO38_RS21865;Dbxref=GenBank:WP_034194301.1;Name=WP_034194301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659200.1;locus_tag=LDO38_RS21865;product=AraC family transcriptional regulator;protein_id=WP_034194301.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 6262 6555 . + . ID=gene-LDO38_RS21870;Name=LDO38_RS21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21870 NZ_CAJZAL010000163.1 Protein Homology CDS 6262 6555 . + 0 ID=cds-WP_080484433.1;Parent=gene-LDO38_RS21870;Dbxref=GenBank:WP_080484433.1;Name=WP_080484433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725389.1;locus_tag=LDO38_RS21870;product=hypothetical protein;protein_id=WP_080484433.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 6716 7042 . + . ID=gene-LDO38_RS21875;Name=LDO38_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21875;old_locus_tag=BVI2075_60008 NZ_CAJZAL010000163.1 Protein Homology CDS 6716 7042 . + 0 ID=cds-WP_011882588.1;Parent=gene-LDO38_RS21875;Dbxref=GenBank:WP_011882588.1;Name=WP_011882588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396622.1;locus_tag=LDO38_RS21875;product=hypothetical protein;protein_id=WP_011882588.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 7154 7744 . + . ID=gene-LDO38_RS21880;Name=LDO38_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21880;old_locus_tag=BVI2075_60009 NZ_CAJZAL010000163.1 Protein Homology CDS 7154 7744 . + 0 ID=cds-WP_011882587.1;Parent=gene-LDO38_RS21880;Dbxref=GenBank:WP_011882587.1;Name=WP_011882587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725386.1;locus_tag=LDO38_RS21880;product=hypothetical protein;protein_id=WP_011882587.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 7819 8100 . + . ID=gene-LDO38_RS21885;Name=LDO38_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21885;old_locus_tag=BVI2075_60010 NZ_CAJZAL010000163.1 Protein Homology CDS 7819 8100 . + 0 ID=cds-WP_011882586.1;Parent=gene-LDO38_RS21885;Dbxref=GenBank:WP_011882586.1;Name=WP_011882586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882586.1;locus_tag=LDO38_RS21885;product=hypothetical protein;protein_id=WP_011882586.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 8145 9947 . + . ID=gene-LDO38_RS21890;Name=LDO38_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21890;old_locus_tag=BVI2075_60011 NZ_CAJZAL010000163.1 Protein Homology CDS 8145 9947 . + 0 ID=cds-WP_069240362.1;Parent=gene-LDO38_RS21890;Dbxref=GenBank:WP_069240362.1;Name=WP_069240362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725385.1;locus_tag=LDO38_RS21890;product=chemotaxis protein CheA;protein_id=WP_069240362.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 10099 10683 . + . ID=gene-LDO38_RS21895;Name=LDO38_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21895;old_locus_tag=BVI2075_60012 NZ_CAJZAL010000163.1 Protein Homology CDS 10099 10683 . + 0 ID=cds-WP_011882584.1;Parent=gene-LDO38_RS21895;Dbxref=GenBank:WP_011882584.1;Name=WP_011882584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480876.1;locus_tag=LDO38_RS21895;product=hypothetical protein;protein_id=WP_011882584.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 10828 12204 . + . ID=gene-LDO38_RS21900;Name=LDO38_RS21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21900;old_locus_tag=BVI2075_60013 NZ_CAJZAL010000163.1 Protein Homology CDS 10828 12204 . + 0 ID=cds-WP_224056636.1;Parent=gene-LDO38_RS21900;Dbxref=GenBank:WP_224056636.1;Name=WP_224056636.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725384.1;locus_tag=LDO38_RS21900;product=sigma-54 dependent transcriptional regulator;protein_id=WP_224056636.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 12307 12798 . - . ID=gene-LDO38_RS21905;Name=LDO38_RS21905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21905;old_locus_tag=BVI2075_60014 NZ_CAJZAL010000163.1 Protein Homology CDS 12307 12798 . - 0 ID=cds-WP_011882582.1;Parent=gene-LDO38_RS21905;Dbxref=GenBank:WP_011882582.1;Name=WP_011882582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898793.1;locus_tag=LDO38_RS21905;product=hypothetical protein;protein_id=WP_011882582.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 13156 13857 . + . ID=gene-LDO38_RS21910;Name=LDO38_RS21910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21910;old_locus_tag=BVI2075_60015 NZ_CAJZAL010000163.1 Protein Homology CDS 13156 13857 . + 0 ID=cds-WP_069246449.1;Parent=gene-LDO38_RS21910;Dbxref=GenBank:WP_069246449.1;Name=WP_069246449.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480881.1;locus_tag=LDO38_RS21910;product=response regulator transcription factor;protein_id=WP_069246449.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 14273 15826 . - . ID=gene-LDO38_RS21915;Name=LDO38_RS21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21915;old_locus_tag=BVI2075_60017 NZ_CAJZAL010000163.1 Protein Homology CDS 14273 15826 . - 0 ID=cds-WP_011882580.1;Parent=gene-LDO38_RS21915;Dbxref=GenBank:WP_011882580.1;Name=WP_011882580.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216630.1;locus_tag=LDO38_RS21915;product=methyl-accepting chemotaxis protein;protein_id=WP_011882580.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 16085 17023 . + . ID=gene-LDO38_RS21920;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=LDO38_RS21920;old_locus_tag=BVI2075_60018 NZ_CAJZAL010000163.1 Protein Homology CDS 16085 17023 . + 0 ID=cds-WP_059991770.1;Parent=gene-LDO38_RS21920;Dbxref=GenBank:WP_059991770.1;Name=WP_059991770.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216631.1;locus_tag=LDO38_RS21920;product=2-dehydropantoate 2-reductase;protein_id=WP_059991770.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 17071 17214 . - . ID=gene-LDO38_RS21925;Name=LDO38_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21925;old_locus_tag=BVI2075_60019 NZ_CAJZAL010000163.1 Protein Homology CDS 17071 17214 . - 0 ID=cds-WP_165487640.1;Parent=gene-LDO38_RS21925;Dbxref=GenBank:WP_165487640.1;Name=WP_165487640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752960.1;locus_tag=LDO38_RS21925;product=hypothetical protein;protein_id=WP_165487640.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 17383 17967 . - . ID=gene-LDO38_RS21930;Name=LDO38_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21930;old_locus_tag=BVI2075_60020 NZ_CAJZAL010000163.1 Protein Homology CDS 17383 17967 . - 0 ID=cds-WP_069246450.1;Parent=gene-LDO38_RS21930;Dbxref=GenBank:WP_069246450.1;Name=WP_069246450.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396642.1;locus_tag=LDO38_RS21930;product=nucleotidyltransferase family protein;protein_id=WP_069246450.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 18347 19642 . - . ID=gene-LDO38_RS21935;Name=LDO38_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21935;old_locus_tag=BVI2075_60021 NZ_CAJZAL010000163.1 Protein Homology CDS 18347 19642 . - 0 ID=cds-WP_034194295.1;Parent=gene-LDO38_RS21935;Dbxref=GenBank:WP_034194295.1;Name=WP_034194295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254972.1;locus_tag=LDO38_RS21935;product=aspartate carbamoyltransferase;protein_id=WP_034194295.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 19856 19990 . + . ID=gene-LDO38_RS21940;Name=LDO38_RS21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21940;old_locus_tag=BVI2075_60022 NZ_CAJZAL010000163.1 Protein Homology CDS 19856 19990 . + 0 ID=cds-WP_009688930.1;Parent=gene-LDO38_RS21940;Dbxref=GenBank:WP_009688930.1;Name=WP_009688930.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010109044.1;locus_tag=LDO38_RS21940;product=entericidin A/B family lipoprotein;protein_id=WP_009688930.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 20100 20648 . - . ID=gene-LDO38_RS21945;Name=LDO38_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21945;old_locus_tag=BVI2075_60023 NZ_CAJZAL010000163.1 Protein Homology CDS 20100 20648 . - 0 ID=cds-WP_011882575.1;Parent=gene-LDO38_RS21945;Dbxref=GenBank:WP_011882575.1;Name=WP_011882575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485834.1;locus_tag=LDO38_RS21945;product=hypothetical protein;protein_id=WP_011882575.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 20796 21737 . - . ID=gene-LDO38_RS21950;Name=LDO38_RS21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21950;old_locus_tag=BVI2075_60024 NZ_CAJZAL010000163.1 Protein Homology CDS 20796 21737 . - 0 ID=cds-WP_059475286.1;Parent=gene-LDO38_RS21950;Dbxref=GenBank:WP_059475286.1;Name=WP_059475286.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725378.1;locus_tag=LDO38_RS21950;product=DMT family transporter;protein_id=WP_059475286.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 22096 22890 . - . ID=gene-LDO38_RS21955;Name=LDO38_RS21955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21955;old_locus_tag=BVI2075_60025 NZ_CAJZAL010000163.1 Protein Homology CDS 22096 22890 . - 0 ID=cds-WP_059475269.1;Parent=gene-LDO38_RS21955;Dbxref=GenBank:WP_059475269.1;Name=WP_059475269.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758098.1;locus_tag=LDO38_RS21955;product=AraC family transcriptional regulator;protein_id=WP_059475269.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 23164 23517 . + . ID=gene-LDO38_RS30625;Name=LDO38_RS30625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30625 NZ_CAJZAL010000163.1 Protein Homology CDS 23164 23517 . + 0 ID=cds-WP_059475268.1;Parent=gene-LDO38_RS30625;Dbxref=GenBank:WP_059475268.1;Name=WP_059475268.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022164.6;locus_tag=LDO38_RS30625;product=MoaF N-terminal domain-containing protein;protein_id=WP_059475268.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 23495 24172 . - . ID=gene-LDO38_RS21965;Name=LDO38_RS21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21965;old_locus_tag=BVI2075_60026 NZ_CAJZAL010000163.1 Protein Homology CDS 23495 24172 . - 0 ID=cds-WP_011882572.1;Parent=gene-LDO38_RS21965;Dbxref=GenBank:WP_011882572.1;Name=WP_011882572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547343.1;locus_tag=LDO38_RS21965;product=dihydrodipicolinate reductase C-terminal domain-containing protein;protein_id=WP_011882572.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 24460 25173 . + . ID=gene-LDO38_RS21970;Name=LDO38_RS21970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21970;old_locus_tag=BVI2075_60027 NZ_CAJZAL010000163.1 Protein Homology CDS 24460 25173 . + 0 ID=cds-WP_011882571.1;Parent=gene-LDO38_RS21970;Dbxref=GenBank:WP_011882571.1;Name=WP_011882571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758094.1;locus_tag=LDO38_RS21970;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_011882571.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 25348 25545 . + . ID=gene-LDO38_RS21975;Name=LDO38_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21975;old_locus_tag=BVI2075_60028 NZ_CAJZAL010000163.1 Protein Homology CDS 25348 25545 . + 0 ID=cds-WP_034194292.1;Parent=gene-LDO38_RS21975;Dbxref=GenBank:WP_034194292.1;Name=WP_034194292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725372.1;locus_tag=LDO38_RS21975;product=oxidoreductase-like domain-containing protein;protein_id=WP_034194292.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 25620 27086 . - . ID=gene-LDO38_RS21980;Name=LDO38_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21980;old_locus_tag=BVI2075_60029 NZ_CAJZAL010000163.1 Protein Homology CDS 25620 27086 . - 0 ID=cds-WP_069240353.1;Parent=gene-LDO38_RS21980;Dbxref=GenBank:WP_069240353.1;Name=WP_069240353.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496843.1;locus_tag=LDO38_RS21980;product=MFS transporter;protein_id=WP_069240353.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 27245 28117 . + . ID=gene-LDO38_RS21985;Name=LDO38_RS21985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21985;old_locus_tag=BVI2075_60030 NZ_CAJZAL010000163.1 Protein Homology CDS 27245 28117 . + 0 ID=cds-WP_011882568.1;Parent=gene-LDO38_RS21985;Dbxref=GenBank:WP_011882568.1;Name=WP_011882568.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898832.1;locus_tag=LDO38_RS21985;product=LysR family transcriptional regulator;protein_id=WP_011882568.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 28449 29348 . - . ID=gene-LDO38_RS21990;Name=LDO38_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21990;old_locus_tag=BVI2075_60031 NZ_CAJZAL010000163.1 Protein Homology CDS 28449 29348 . - 0 ID=cds-WP_059735321.1;Parent=gene-LDO38_RS21990;Dbxref=GenBank:WP_059735321.1;Name=WP_059735321.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216654.1;locus_tag=LDO38_RS21990;product=LysR family transcriptional regulator;protein_id=WP_059735321.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 29448 30428 . + . ID=gene-LDO38_RS21995;Name=LDO38_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS21995;old_locus_tag=BVI2075_60032 NZ_CAJZAL010000163.1 Protein Homology CDS 29448 30428 . + 0 ID=cds-WP_069246451.1;Parent=gene-LDO38_RS21995;Dbxref=GenBank:WP_069246451.1;Name=WP_069246451.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882565.1;locus_tag=LDO38_RS21995;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_069246451.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 31207 32085 . + . ID=gene-LDO38_RS22000;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=LDO38_RS22000;old_locus_tag=BVI2075_60033 NZ_CAJZAL010000163.1 Protein Homology CDS 31207 32085 . + 0 ID=cds-WP_059460931.1;Parent=gene-LDO38_RS22000;Dbxref=GenBank:WP_059460931.1;Name=WP_059460931.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882564.1;locus_tag=LDO38_RS22000;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_059460931.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 32510 33748 . + . ID=gene-LDO38_RS22005;Name=LDO38_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22005;old_locus_tag=BVI2075_60034 NZ_CAJZAL010000163.1 Protein Homology CDS 32510 33748 . + 0 ID=cds-WP_011882563.1;Parent=gene-LDO38_RS22005;Dbxref=GenBank:WP_011882563.1;Name=WP_011882563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480924.1;locus_tag=LDO38_RS22005;product=ABC transporter substrate-binding protein;protein_id=WP_011882563.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 33745 34653 . + . ID=gene-LDO38_RS22010;Name=LDO38_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22010;old_locus_tag=BVI2075_60035 NZ_CAJZAL010000163.1 Protein Homology CDS 33745 34653 . + 0 ID=cds-WP_080938594.1;Parent=gene-LDO38_RS22010;Dbxref=GenBank:WP_080938594.1;Name=WP_080938594.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725363.1;locus_tag=LDO38_RS22010;product=carbohydrate ABC transporter permease;protein_id=WP_080938594.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 34623 35510 . + . ID=gene-LDO38_RS22015;Name=LDO38_RS22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22015;old_locus_tag=BVI2075_60036 NZ_CAJZAL010000163.1 Protein Homology CDS 34623 35510 . + 0 ID=cds-WP_069246453.1;Parent=gene-LDO38_RS22015;Dbxref=GenBank:WP_069246453.1;Name=WP_069246453.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480926.1;locus_tag=LDO38_RS22015;product=carbohydrate ABC transporter permease;protein_id=WP_069246453.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 35520 36542 . - . ID=gene-LDO38_RS22020;Name=LDO38_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22020;old_locus_tag=BVI2075_60037 NZ_CAJZAL010000163.1 Protein Homology CDS 35520 36542 . - 0 ID=cds-WP_014725361.1;Parent=gene-LDO38_RS22020;Dbxref=GenBank:WP_014725361.1;Name=WP_014725361.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882560.1;locus_tag=LDO38_RS22020;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_014725361.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 36549 37463 . + . ID=gene-LDO38_RS22025;Name=LDO38_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22025;old_locus_tag=BVI2075_60038 NZ_CAJZAL010000163.1 Protein Homology CDS 36549 37463 . + 0 ID=cds-WP_014725360.1;Parent=gene-LDO38_RS22025;Dbxref=GenBank:WP_014725360.1;Name=WP_014725360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725360.1;locus_tag=LDO38_RS22025;product=phosphatidylinositol-specific phospholipase C;protein_id=WP_014725360.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 37460 38413 . - . ID=gene-LDO38_RS22030;Name=LDO38_RS22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22030;old_locus_tag=BVI2075_60039 NZ_CAJZAL010000163.1 Protein Homology CDS 37460 38413 . - 0 ID=cds-WP_069240349.1;Parent=gene-LDO38_RS22030;Dbxref=GenBank:WP_069240349.1;Name=WP_069240349.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339728.1;locus_tag=LDO38_RS22030;product=alpha/beta hydrolase family protein;protein_id=WP_069240349.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 38525 39136 . - . ID=gene-LDO38_RS22035;Name=LDO38_RS22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22035;old_locus_tag=BVI2075_60040 NZ_CAJZAL010000163.1 Protein Homology CDS 38525 39136 . - 0 ID=cds-WP_011882557.1;Parent=gene-LDO38_RS22035;Dbxref=GenBank:WP_011882557.1;Name=WP_011882557.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760511.1;locus_tag=LDO38_RS22035;product=LysE family translocator;protein_id=WP_011882557.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 39223 39750 . + . ID=gene-LDO38_RS22040;Name=LDO38_RS22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22040;old_locus_tag=BVI2075_60041 NZ_CAJZAL010000163.1 Protein Homology CDS 39223 39750 . + 0 ID=cds-WP_011882556.1;Parent=gene-LDO38_RS22040;Dbxref=GenBank:WP_011882556.1;Name=WP_011882556.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216733.1;locus_tag=LDO38_RS22040;product=GNAT family N-acetyltransferase;protein_id=WP_011882556.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 39763 40824 . - . ID=gene-LDO38_RS22045;Name=LDO38_RS22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22045;old_locus_tag=BVI2075_60042 NZ_CAJZAL010000163.1 Protein Homology CDS 39763 40824 . - 0 ID=cds-WP_011882555.1;Parent=gene-LDO38_RS22045;Dbxref=GenBank:WP_011882555.1;Name=WP_011882555.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602739.1;locus_tag=LDO38_RS22045;product=alkene reductase;protein_id=WP_011882555.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 40894 41202 . - . ID=gene-LDO38_RS22050;Name=LDO38_RS22050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22050;old_locus_tag=BVI2075_60043 NZ_CAJZAL010000163.1 Protein Homology CDS 40894 41202 . - 0 ID=cds-WP_034194241.1;Parent=gene-LDO38_RS22050;Dbxref=GenBank:WP_034194241.1;Name=WP_034194241.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898858.1;locus_tag=LDO38_RS22050;product=ArsR/SmtB family transcription factor;protein_id=WP_034194241.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 41339 42238 . - . ID=gene-LDO38_RS22055;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=LDO38_RS22055;old_locus_tag=BVI2075_60044 NZ_CAJZAL010000163.1 Protein Homology CDS 41339 42238 . - 0 ID=cds-WP_014725325.1;Parent=gene-LDO38_RS22055;Dbxref=GenBank:WP_014725325.1;Name=WP_014725325.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=gcvA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882553.1;locus_tag=LDO38_RS22055;product=transcriptional regulator GcvA;protein_id=WP_014725325.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 42358 43062 . + . ID=gene-LDO38_RS22060;Name=LDO38_RS22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22060;old_locus_tag=BVI2075_60045 NZ_CAJZAL010000163.1 Protein Homology CDS 42358 43062 . + 0 ID=cds-WP_059475284.1;Parent=gene-LDO38_RS22060;Dbxref=GenBank:WP_059475284.1;Name=WP_059475284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404426.1;locus_tag=LDO38_RS22060;product=SDR family oxidoreductase;protein_id=WP_059475284.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 43121 44260 . - . ID=gene-LDO38_RS22065;Name=LDO38_RS22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22065;old_locus_tag=BVI2075_60046 NZ_CAJZAL010000163.1 Protein Homology CDS 43121 44260 . - 0 ID=cds-WP_059463059.1;Parent=gene-LDO38_RS22065;Dbxref=GenBank:WP_059463059.1;Name=WP_059463059.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753646.1;locus_tag=LDO38_RS22065;product=patatin-like phospholipase family protein;protein_id=WP_059463059.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 44881 46635 . + . ID=gene-LDO38_RS22070;Name=LDO38_RS22070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22070;old_locus_tag=BVI2075_60047 NZ_CAJZAL010000163.1 Protein Homology CDS 44881 46635 . + 0 ID=cds-WP_069246454.1;Parent=gene-LDO38_RS22070;Dbxref=GenBank:WP_069246454.1;Name=WP_069246454.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892433.1;locus_tag=LDO38_RS22070;product=ABC transporter permease;protein_id=WP_069246454.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 46647 47008 . + . ID=gene-LDO38_RS30630;Name=LDO38_RS30630;end_range=47008,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30630;partial=true NZ_CAJZAL010000163.1 Protein Homology CDS 46647 47008 . + 0 ID=cds-WP_435520975.1;Parent=gene-LDO38_RS30630;Dbxref=GenBank:WP_435520975.1;Name=WP_435520975.1;Ontology_term=GO:0005524;end_range=47008,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484429.1;locus_tag=LDO38_RS30630;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_435520975.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 47019 47768 . + . ID=gene-LDO38_RS22075;Name=LDO38_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22075;old_locus_tag=BVI2075_60049;partial=true;start_range=.,47019 NZ_CAJZAL010000163.1 Protein Homology CDS 47019 47768 . + 0 ID=cds-WP_435520976.1;Parent=gene-LDO38_RS22075;Dbxref=GenBank:WP_435520976.1;Name=WP_435520976.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484429.1;locus_tag=LDO38_RS22075;partial=true;product=ABC transporter ATP-binding protein;protein_id=WP_435520976.1;start_range=.,47019;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 47818 48696 . - . ID=gene-LDO38_RS22080;Name=LDO38_RS22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22080;old_locus_tag=BVI2075_60050 NZ_CAJZAL010000163.1 Protein Homology CDS 47818 48696 . - 0 ID=cds-WP_034195257.1;Parent=gene-LDO38_RS22080;Dbxref=GenBank:WP_034195257.1;Name=WP_034195257.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882548.1;locus_tag=LDO38_RS22080;product=MurR/RpiR family transcriptional regulator;protein_id=WP_034195257.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 48854 49057 . - . ID=gene-LDO38_RS22085;Name=LDO38_RS22085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22085 NZ_CAJZAL010000163.1 GeneMarkS-2+ CDS 48854 49057 . - 0 ID=cds-WP_124259751.1;Parent=gene-LDO38_RS22085;Dbxref=GenBank:WP_124259751.1;Name=WP_124259751.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS22085;product=hypothetical protein;protein_id=WP_124259751.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 49056 50807 . + . ID=gene-LDO38_RS22090;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=LDO38_RS22090;old_locus_tag=BVI2075_60052 NZ_CAJZAL010000163.1 Protein Homology CDS 49056 50807 . + 0 ID=cds-WP_059894852.1;Parent=gene-LDO38_RS22090;Dbxref=GenBank:WP_059894852.1;Name=WP_059894852.1;Ontology_term=GO:0006750,GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione biosynthetic process|0006750||IEA,glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760501.1;locus_tag=LDO38_RS22090;product=gamma-glutamyltransferase;protein_id=WP_059894852.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq pseudogene 50801 51013 . + . ID=gene-LDO38_RS22095;Name=LDO38_RS22095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS22095;partial=true;pseudo=true;start_range=.,50801 NZ_CAJZAL010000163.1 Protein Homology CDS 50801 51013 . + 0 ID=cds-LDO38_RS22095;Parent=gene-LDO38_RS22095;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766172.1;locus_tag=LDO38_RS22095;partial=true;product=dicarboxylate/amino acid:cation symporter;pseudo=true;start_range=.,50801;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 51125 51508 . - . ID=gene-LDO38_RS22100;Name=LDO38_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22100;old_locus_tag=BVI2075_60053 NZ_CAJZAL010000163.1 Protein Homology CDS 51125 51508 . - 0 ID=cds-WP_014725317.1;Parent=gene-LDO38_RS22100;Dbxref=GenBank:WP_014725317.1;Name=WP_014725317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752581.1;locus_tag=LDO38_RS22100;product=YXWGXW repeat-containing protein;protein_id=WP_014725317.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 52122 53210 . + . ID=gene-LDO38_RS22105;Name=LDO38_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22105;old_locus_tag=BVI2075_60054 NZ_CAJZAL010000163.1 Protein Homology CDS 52122 53210 . + 0 ID=cds-WP_011882545.1;Parent=gene-LDO38_RS22105;Dbxref=GenBank:WP_011882545.1;Name=WP_011882545.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396739.1;locus_tag=LDO38_RS22105;product=porin;protein_id=WP_011882545.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 53408 53806 . - . ID=gene-LDO38_RS22110;Name=LDO38_RS22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22110;old_locus_tag=BVI2075_60055 NZ_CAJZAL010000163.1 Protein Homology CDS 53408 53806 . - 0 ID=cds-WP_011882544.1;Parent=gene-LDO38_RS22110;Dbxref=GenBank:WP_011882544.1;Name=WP_011882544.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761842.1;locus_tag=LDO38_RS22110;product=GreA/GreB family elongation factor;protein_id=WP_011882544.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 54317 54646 . + . ID=gene-LDO38_RS22115;Name=LDO38_RS22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22115;old_locus_tag=BVI2075_60057 NZ_CAJZAL010000163.1 Protein Homology CDS 54317 54646 . + 0 ID=cds-WP_059474411.1;Parent=gene-LDO38_RS22115;Dbxref=GenBank:WP_059474411.1;Name=WP_059474411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496913.1;locus_tag=LDO38_RS22115;product=DUF4148 domain-containing protein;protein_id=WP_059474411.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 54787 55248 . - . ID=gene-LDO38_RS22120;Name=LDO38_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22120;old_locus_tag=BVI2075_60058 NZ_CAJZAL010000163.1 Protein Homology CDS 54787 55248 . - 0 ID=cds-WP_014725314.1;Parent=gene-LDO38_RS22120;Dbxref=GenBank:WP_014725314.1;Name=WP_014725314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486040.1;locus_tag=LDO38_RS22120;product=CBS domain-containing protein;protein_id=WP_014725314.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 55425 56075 . + . ID=gene-LDO38_RS22125;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=LDO38_RS22125;old_locus_tag=BVI2075_60059 NZ_CAJZAL010000163.1 Protein Homology CDS 55425 56075 . + 0 ID=cds-WP_011882540.1;Parent=gene-LDO38_RS22125;Dbxref=GenBank:WP_011882540.1;Name=WP_011882540.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195483.1;locus_tag=LDO38_RS22125;product=GTP cyclohydrolase II;protein_id=WP_011882540.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 56130 57212 . + . ID=gene-LDO38_RS22130;Name=LDO38_RS22130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22130;old_locus_tag=BVI2075_60060 NZ_CAJZAL010000163.1 Protein Homology CDS 56130 57212 . + 0 ID=cds-WP_014725312.1;Parent=gene-LDO38_RS22130;Dbxref=GenBank:WP_014725312.1;Name=WP_014725312.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF013884.7;locus_tag=LDO38_RS22130;product=acyltransferase family protein;protein_id=WP_014725312.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 57229 57402 . + . ID=gene-LDO38_RS22135;Name=LDO38_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22135;old_locus_tag=BVI2075_60061 NZ_CAJZAL010000163.1 GeneMarkS-2+ CDS 57229 57402 . + 0 ID=cds-WP_155121977.1;Parent=gene-LDO38_RS22135;Dbxref=GenBank:WP_155121977.1;Name=WP_155121977.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS22135;product=hypothetical protein;protein_id=WP_155121977.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 57501 57791 . + . ID=gene-LDO38_RS22140;Name=LDO38_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22140;old_locus_tag=BVI2075_60062 NZ_CAJZAL010000163.1 Protein Homology CDS 57501 57791 . + 0 ID=cds-WP_224019468.1;Parent=gene-LDO38_RS22140;Dbxref=GenBank:WP_224019468.1;Name=WP_224019468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725310.1;locus_tag=LDO38_RS22140;product=VgrG protein;protein_id=WP_224019468.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 57791 58660 . + . ID=gene-LDO38_RS22145;Name=LDO38_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22145;old_locus_tag=BVI2075_60063 NZ_CAJZAL010000163.1 Protein Homology CDS 57791 58660 . + 0 ID=cds-WP_069240339.1;Parent=gene-LDO38_RS22145;Dbxref=GenBank:WP_069240339.1;Name=WP_069240339.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733122.1;locus_tag=LDO38_RS22145;product=ankyrin repeat domain-containing protein;protein_id=WP_069240339.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 58881 59654 . - . ID=gene-LDO38_RS22150;Name=LDO38_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22150;old_locus_tag=BVI2075_60064 NZ_CAJZAL010000163.1 Protein Homology CDS 58881 59654 . - 0 ID=cds-WP_174479778.1;Parent=gene-LDO38_RS22150;Dbxref=GenBank:WP_174479778.1;Name=WP_174479778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725308.1;locus_tag=LDO38_RS22150;product=hypothetical protein;protein_id=WP_174479778.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 59707 60315 . - . ID=gene-LDO38_RS22155;Name=LDO38_RS22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22155;old_locus_tag=BVI2075_60065 NZ_CAJZAL010000163.1 Protein Homology CDS 59707 60315 . - 0 ID=cds-WP_059696352.1;Parent=gene-LDO38_RS22155;Dbxref=GenBank:WP_059696352.1;Name=WP_059696352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195479.1;locus_tag=LDO38_RS22155;product=acyl-homoserine-lactone synthase;protein_id=WP_059696352.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 60525 60968 . - . ID=gene-LDO38_RS22160;Name=LDO38_RS22160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22160;old_locus_tag=BVI2075_60066 NZ_CAJZAL010000163.1 Protein Homology CDS 60525 60968 . - 0 ID=cds-WP_011882533.1;Parent=gene-LDO38_RS22160;Dbxref=GenBank:WP_011882533.1;Name=WP_011882533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366335.1;locus_tag=LDO38_RS22160;product=DUF4902 domain-containing protein;protein_id=WP_011882533.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq pseudogene 61042 61760 . + . ID=gene-LDO38_RS22165;Name=LDO38_RS22165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS22165;old_locus_tag=BVI2075_60068;pseudo=true NZ_CAJZAL010000163.1 Protein Homology CDS 61042 61760 . + 0 ID=cds-LDO38_RS22165;Parent=gene-LDO38_RS22165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409826.1;locus_tag=LDO38_RS22165;product=autoinducer binding domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 61819 62526 . - . ID=gene-LDO38_RS22170;Name=LDO38_RS22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22170;old_locus_tag=BVI2075_60069 NZ_CAJZAL010000163.1 Protein Homology CDS 61819 62526 . - 0 ID=cds-WP_011882531.1;Parent=gene-LDO38_RS22170;Dbxref=GenBank:WP_011882531.1;Name=WP_011882531.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009897347.1;locus_tag=LDO38_RS22170;product=MgtC/SapB family protein;protein_id=WP_011882531.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 62855 63055 . - . ID=gene-LDO38_RS22175;Name=LDO38_RS22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22175 NZ_CAJZAL010000163.1 GeneMarkS-2+ CDS 62855 63055 . - 0 ID=cds-WP_034195251.1;Parent=gene-LDO38_RS22175;Dbxref=GenBank:WP_034195251.1;Name=WP_034195251.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS22175;product=hypothetical protein;protein_id=WP_034195251.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 63059 64207 . + . ID=gene-LDO38_RS22180;Name=LDO38_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22180;old_locus_tag=BVI2075_60071 NZ_CAJZAL010000163.1 Protein Homology CDS 63059 64207 . + 0 ID=cds-WP_011882530.1;Parent=gene-LDO38_RS22180;Dbxref=GenBank:WP_011882530.1;Name=WP_011882530.1;Ontology_term=GO:0016311,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403202.1;locus_tag=LDO38_RS22180;product=metallophosphoesterase;protein_id=WP_011882530.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 64469 65068 . + . ID=gene-LDO38_RS22185;Name=LDO38_RS22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22185;old_locus_tag=BVI2075_60072 NZ_CAJZAL010000163.1 Protein Homology CDS 64469 65068 . + 0 ID=cds-WP_069246455.1;Parent=gene-LDO38_RS22185;Dbxref=GenBank:WP_069246455.1;Name=WP_069246455.1;Ontology_term=GO:0003676,GO:0008198,GO:0016706;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ferrous iron binding|0008198||IEA,2-oxoglutarate-dependent dioxygenase activity|0016706||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725302.1;locus_tag=LDO38_RS22185;product=alpha-ketoglutarate-dependent dioxygenase AlkB family protein;protein_id=WP_069246455.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 65401 65607 . + . ID=gene-LDO38_RS22190;Name=LDO38_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22190;old_locus_tag=BVI2075_60073 NZ_CAJZAL010000163.1 Protein Homology CDS 65401 65607 . + 0 ID=cds-WP_043292475.1;Parent=gene-LDO38_RS22190;Dbxref=GenBank:WP_043292475.1;Name=WP_043292475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766132.1;locus_tag=LDO38_RS22190;product=hypothetical protein;protein_id=WP_043292475.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 66220 66630 . + . ID=gene-LDO38_RS22195;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=LDO38_RS22195;old_locus_tag=BVI2075_60074 NZ_CAJZAL010000163.1 Protein Homology CDS 66220 66630 . + 0 ID=cds-WP_063710896.1;Parent=gene-LDO38_RS22195;Dbxref=GenBank:WP_063710896.1;Name=WP_063710896.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602073.1;locus_tag=LDO38_RS22195;product=type II secretion system minor pseudopilin GspI;protein_id=WP_063710896.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 66614 67276 . + . ID=gene-LDO38_RS22200;Name=LDO38_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22200;old_locus_tag=BVI2075_60075 NZ_CAJZAL010000163.1 Protein Homology CDS 66614 67276 . + 0 ID=cds-WP_034195246.1;Parent=gene-LDO38_RS22200;Dbxref=GenBank:WP_034195246.1;Name=WP_034195246.1;Ontology_term=GO:0015628,GO:0005886,GO:0015627;gbkey=CDS;go_component=plasma membrane|0005886||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725299.1;locus_tag=LDO38_RS22200;product=PulJ/GspJ family protein;protein_id=WP_034195246.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 67414 71046 . + . ID=gene-LDO38_RS22205;Name=LDO38_RS22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22205;old_locus_tag=BVI2075_60076 NZ_CAJZAL010000163.1 Protein Homology CDS 67414 71046 . + 0 ID=cds-WP_224056634.1;Parent=gene-LDO38_RS22205;Dbxref=GenBank:WP_224056634.1;Name=WP_224056634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725298.1;locus_tag=LDO38_RS22205;product=tetratricopeptide repeat protein;protein_id=WP_224056634.1;transl_table=11 NZ_CAJZAL010000163.1 RefSeq gene 71043 71358 . + . ID=gene-LDO38_RS22210;Name=LDO38_RS22210;end_range=71358,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22210;partial=true NZ_CAJZAL010000163.1 Protein Homology CDS 71043 71358 . + 0 ID=cds-WP_224056635.1;Parent=gene-LDO38_RS22210;Dbxref=GenBank:WP_224056635.1;Name=WP_224056635.1;end_range=71358,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882524.1;locus_tag=LDO38_RS22210;partial=true;product=tetratricopeptide repeat protein;protein_id=WP_224056635.1;transl_table=11 ##sequence-region NZ_CAJZAL010000164.1 1 19320 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000164.1 RefSeq region 1 19320 . + . ID=NZ_CAJZAL010000164.1:1..19320;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_60 NZ_CAJZAL010000164.1 RefSeq gene 1 1653 . - . ID=gene-LDO38_RS22215;Name=LDO38_RS22215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22215;partial=true;start_range=.,1 NZ_CAJZAL010000164.1 Protein Homology CDS 1 1653 . - 0 ID=cds-WP_224056637.1;Parent=gene-LDO38_RS22215;Dbxref=GenBank:WP_224056637.1;Name=WP_224056637.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492664.1;locus_tag=LDO38_RS22215;partial=true;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_224056637.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000164.1 RefSeq gene 2167 3225 . + . ID=gene-LDO38_RS22220;Name=LDO38_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22220;old_locus_tag=BVI2075_600003 NZ_CAJZAL010000164.1 Protein Homology CDS 2167 3225 . + 0 ID=cds-WP_034195399.1;Parent=gene-LDO38_RS22220;Dbxref=GenBank:WP_034195399.1;Name=WP_034195399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657042.1;locus_tag=LDO38_RS22220;product=ATP-NAD kinase family protein;protein_id=WP_034195399.1;transl_table=11 NZ_CAJZAL010000164.1 RefSeq gene 3285 4061 . + . ID=gene-LDO38_RS22225;Name=LDO38_RS22225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22225;old_locus_tag=BVI2075_600004 NZ_CAJZAL010000164.1 Protein Homology CDS 3285 4061 . + 0 ID=cds-WP_011884992.1;Parent=gene-LDO38_RS22225;Dbxref=GenBank:WP_011884992.1;Name=WP_011884992.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213237.1;locus_tag=LDO38_RS22225;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_011884992.1;transl_table=11 NZ_CAJZAL010000164.1 RefSeq gene 4138 5121 . + . ID=gene-LDO38_RS22230;Name=LDO38_RS22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22230;old_locus_tag=BVI2075_600006 NZ_CAJZAL010000164.1 Protein Homology CDS 4138 5121 . + 0 ID=cds-WP_014723114.1;Parent=gene-LDO38_RS22230;Dbxref=GenBank:WP_014723114.1;Name=WP_014723114.1;Ontology_term=GO:0016624,GO:0030976;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C disulfide as acceptor|0016624||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094295.1;locus_tag=LDO38_RS22230;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_014723114.1;transl_table=11 NZ_CAJZAL010000164.1 RefSeq gene 5183 6187 . + . ID=gene-LDO38_RS22235;Name=LDO38_RS22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22235;old_locus_tag=BVI2075_600007 NZ_CAJZAL010000164.1 Protein Homology CDS 5183 6187 . + 0 ID=cds-WP_046426131.1;Parent=gene-LDO38_RS22235;Dbxref=GenBank:WP_046426131.1;Name=WP_046426131.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364013.1;locus_tag=LDO38_RS22235;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_046426131.1;transl_table=11 NZ_CAJZAL010000164.1 RefSeq gene 6192 7307 . + . ID=gene-LDO38_RS22240;Name=LDO38_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22240;old_locus_tag=BVI2075_600008 NZ_CAJZAL010000164.1 Protein Homology CDS 6192 7307 . + 0 ID=cds-WP_034195400.1;Parent=gene-LDO38_RS22240;Dbxref=GenBank:WP_034195400.1;Name=WP_034195400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328642.1;locus_tag=LDO38_RS22240;product=acetoin dehydrogenase dihydrolipoyllysine-residue acetyltransferase subunit;protein_id=WP_034195400.1;transl_table=11 NZ_CAJZAL010000164.1 RefSeq gene 7310 8275 . + . ID=gene-LDO38_RS22245;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=LDO38_RS22245;old_locus_tag=BVI2075_600009 NZ_CAJZAL010000164.1 Protein Homology CDS 7310 8275 . + 0 ID=cds-WP_034195401.1;Parent=gene-LDO38_RS22245;Dbxref=GenBank:WP_034195401.1;Name=WP_034195401.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657038.1;locus_tag=LDO38_RS22245;product=lipoyl synthase;protein_id=WP_034195401.1;transl_table=11 NZ_CAJZAL010000164.1 RefSeq gene 8291 9640 . - . ID=gene-LDO38_RS22250;Name=LDO38_RS22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22250;old_locus_tag=BVI2075_600010 NZ_CAJZAL010000164.1 Protein Homology CDS 8291 9640 . - 0 ID=cds-WP_034195402.1;Parent=gene-LDO38_RS22250;Dbxref=GenBank:WP_034195402.1;Name=WP_034195402.1;Ontology_term=GO:0006855,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884987.1;locus_tag=LDO38_RS22250;product=MATE family efflux transporter;protein_id=WP_034195402.1;transl_table=11 NZ_CAJZAL010000164.1 RefSeq gene 9643 11400 . - . ID=gene-LDO38_RS22255;Name=LDO38_RS22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22255;old_locus_tag=BVI2075_600011 NZ_CAJZAL010000164.1 Protein Homology CDS 9643 11400 . - 0 ID=cds-WP_059475037.1;Parent=gene-LDO38_RS22255;Dbxref=GenBank:WP_059475037.1;Name=WP_059475037.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753670.1;locus_tag=LDO38_RS22255;product=ArnT family glycosyltransferase;protein_id=WP_059475037.1;transl_table=11 NZ_CAJZAL010000164.1 RefSeq gene 11630 11893 . - . ID=gene-LDO38_RS22260;Name=LDO38_RS22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22260;old_locus_tag=BVI2075_600012 NZ_CAJZAL010000164.1 Protein Homology CDS 11630 11893 . - 0 ID=cds-WP_011884985.1;Parent=gene-LDO38_RS22260;Dbxref=GenBank:WP_011884985.1;Name=WP_011884985.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010103191.1;locus_tag=LDO38_RS22260;product=type B 50S ribosomal protein L31;protein_id=WP_011884985.1;transl_table=11 NZ_CAJZAL010000164.1 RefSeq gene 12054 12884 . - . ID=gene-LDO38_RS22265;Name=LDO38_RS22265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22265;old_locus_tag=BVI2075_600013 NZ_CAJZAL010000164.1 Protein Homology CDS 12054 12884 . - 0 ID=cds-WP_011884984.1;Parent=gene-LDO38_RS22265;Dbxref=GenBank:WP_011884984.1;Name=WP_011884984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364008.1;locus_tag=LDO38_RS22265;product=zinc-dependent peptidase;protein_id=WP_011884984.1;transl_table=11 NZ_CAJZAL010000164.1 RefSeq gene 12923 14479 . - . ID=gene-LDO38_RS22270;Name=LDO38_RS22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22270;old_locus_tag=BVI2075_600014 NZ_CAJZAL010000164.1 Protein Homology CDS 12923 14479 . - 0 ID=cds-WP_059460797.1;Parent=gene-LDO38_RS22270;Dbxref=GenBank:WP_059460797.1;Name=WP_059460797.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255169.1;locus_tag=LDO38_RS22270;product=MFS transporter;protein_id=WP_059460797.1;transl_table=11 NZ_CAJZAL010000164.1 RefSeq gene 14476 14976 . - . ID=gene-LDO38_RS22275;Name=LDO38_RS22275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22275;old_locus_tag=BVI2075_600015 NZ_CAJZAL010000164.1 Protein Homology CDS 14476 14976 . - 0 ID=cds-WP_014723110.1;Parent=gene-LDO38_RS22275;Dbxref=GenBank:WP_014723110.1;Name=WP_014723110.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328636.1;locus_tag=LDO38_RS22275;product=MerR family transcriptional regulator;protein_id=WP_014723110.1;transl_table=11 NZ_CAJZAL010000164.1 RefSeq gene 15107 16369 . - . ID=gene-LDO38_RS22280;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=LDO38_RS22280;old_locus_tag=BVI2075_600016 NZ_CAJZAL010000164.1 Protein Homology CDS 15107 16369 . - 0 ID=cds-WP_006478662.1;Parent=gene-LDO38_RS22280;Dbxref=GenBank:WP_006478662.1;Name=WP_006478662.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013435079.1;locus_tag=LDO38_RS22280;product=transcription termination factor Rho;protein_id=WP_006478662.1;transl_table=11 NZ_CAJZAL010000164.1 RefSeq gene 16564 16890 . - . ID=gene-LDO38_RS22285;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=LDO38_RS22285;old_locus_tag=BVI2075_600017 NZ_CAJZAL010000164.1 Protein Homology CDS 16564 16890 . - 0 ID=cds-WP_006402348.1;Parent=gene-LDO38_RS22285;Dbxref=GenBank:WP_006402348.1;Name=WP_006402348.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026981.1;locus_tag=LDO38_RS22285;product=thioredoxin TrxA;protein_id=WP_006402348.1;transl_table=11 NZ_CAJZAL010000164.1 RefSeq gene 17281 17379 . + . ID=gene-LDO38_RS22290;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=LDO38_RS22290;old_locus_tag=BVI2075_MISCRNA33 NZ_CAJZAL010000164.1 cmsearch SRP_RNA 17281 17379 . + . ID=rna-LDO38_RS22290;Parent=gene-LDO38_RS22290;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO38_RS22290;product=signal recognition particle sRNA small type NZ_CAJZAL010000164.1 cmsearch exon 17281 17379 . + . ID=exon-LDO38_RS22290-1;Parent=rna-LDO38_RS22290;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO38_RS22290;product=signal recognition particle sRNA small type NZ_CAJZAL010000164.1 RefSeq gene 17507 19153 . + . ID=gene-LDO38_RS22295;Name=dnaX;end_range=19153,.;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=LDO38_RS22295;old_locus_tag=BVI2075_600020;partial=true NZ_CAJZAL010000164.1 Protein Homology CDS 17507 19153 . + 0 ID=cds-WP_435520977.1;Parent=gene-LDO38_RS22295;Dbxref=GenBank:WP_435520977.1;Name=WP_435520977.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;end_range=19153,.;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408522.1;locus_tag=LDO38_RS22295;partial=true;product=DNA polymerase III subunit gamma/tau;protein_id=WP_435520977.1;transl_table=11 ##sequence-region NZ_CAJZAL010000165.1 1 54654 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000165.1 RefSeq region 1 54654 . + . ID=NZ_CAJZAL010000165.1:1..54654;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_61 NZ_CAJZAL010000165.1 RefSeq gene 1 1023 . + . ID=gene-LDO38_RS22300;Name=LDO38_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22300;old_locus_tag=BVI2075_610001;partial=true;start_range=.,1 NZ_CAJZAL010000165.1 Protein Homology CDS 1 1023 . + 0 ID=cds-WP_224056638.1;Parent=gene-LDO38_RS22300;Dbxref=GenBank:WP_224056638.1;Name=WP_224056638.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882839.1;locus_tag=LDO38_RS22300;partial=true;product=MFS transporter;protein_id=WP_224056638.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 1064 1492 . - . ID=gene-LDO38_RS22305;Name=LDO38_RS22305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22305;old_locus_tag=BVI2075_610002 NZ_CAJZAL010000165.1 Protein Homology CDS 1064 1492 . - 0 ID=cds-WP_014722195.1;Parent=gene-LDO38_RS22305;Dbxref=GenBank:WP_014722195.1;Name=WP_014722195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362790.1;locus_tag=LDO38_RS22305;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_014722195.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 1807 3333 . + . ID=gene-LDO38_RS22310;Name=exaC;gbkey=Gene;gene=exaC;gene_biotype=protein_coding;locus_tag=LDO38_RS22310;old_locus_tag=BVI2075_610003 NZ_CAJZAL010000165.1 Protein Homology CDS 1807 3333 . + 0 ID=cds-WP_011882841.1;Parent=gene-LDO38_RS22310;Dbxref=GenBank:WP_011882841.1;Name=WP_011882841.1;Ontology_term=GO:0006068,GO:0004029;gbkey=CDS;gene=exaC;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA;go_process=ethanol catabolic process|0006068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489874.1;locus_tag=LDO38_RS22310;product=acetaldehyde dehydrogenase ExaC;protein_id=WP_011882841.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 3779 4315 . + . ID=gene-LDO38_RS22315;Name=LDO38_RS22315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22315;old_locus_tag=BVI2075_610004 NZ_CAJZAL010000165.1 Protein Homology CDS 3779 4315 . + 0 ID=cds-WP_014722196.1;Parent=gene-LDO38_RS22315;Dbxref=GenBank:WP_014722196.1;Name=WP_014722196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882842.1;locus_tag=LDO38_RS22315;product=hypothetical protein;protein_id=WP_014722196.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 4521 5555 . + . ID=gene-LDO38_RS22320;Name=LDO38_RS22320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22320;old_locus_tag=BVI2075_610005 NZ_CAJZAL010000165.1 Protein Homology CDS 4521 5555 . + 0 ID=cds-WP_034192975.1;Parent=gene-LDO38_RS22320;Dbxref=GenBank:WP_034192975.1;Name=WP_034192975.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362792.1;locus_tag=LDO38_RS22320;product=helix-turn-helix domain-containing protein;protein_id=WP_034192975.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 5689 6810 . - . ID=gene-LDO38_RS22325;Name=LDO38_RS22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22325;old_locus_tag=BVI2075_610006 NZ_CAJZAL010000165.1 Protein Homology CDS 5689 6810 . - 0 ID=cds-WP_069246102.1;Parent=gene-LDO38_RS22325;Dbxref=GenBank:WP_069246102.1;Name=WP_069246102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882844.1;locus_tag=LDO38_RS22325;product=ADP-heptose--LPS heptosyltransferase;protein_id=WP_069246102.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 6807 8510 . - . ID=gene-LDO38_RS22330;Name=LDO38_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22330;old_locus_tag=BVI2075_610007 NZ_CAJZAL010000165.1 Protein Homology CDS 6807 8510 . - 0 ID=cds-WP_069246103.1;Parent=gene-LDO38_RS22330;Dbxref=GenBank:WP_069246103.1;Name=WP_069246103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600702.1;locus_tag=LDO38_RS22330;product=thiamine pyrophosphate-binding protein;protein_id=WP_069246103.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 8789 9025 . + . ID=gene-LDO38_RS22335;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=LDO38_RS22335;old_locus_tag=BVI2075_610008 NZ_CAJZAL010000165.1 Protein Homology CDS 8789 9025 . + 0 ID=cds-WP_045578624.1;Parent=gene-LDO38_RS22335;Dbxref=GenBank:WP_045578624.1;Name=WP_045578624.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759705.1;locus_tag=LDO38_RS22335;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_045578624.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 9025 9426 . + . ID=gene-LDO38_RS22340;Name=LDO38_RS22340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22340;old_locus_tag=BVI2075_610009 NZ_CAJZAL010000165.1 Protein Homology CDS 9025 9426 . + 0 ID=cds-WP_059735504.1;Parent=gene-LDO38_RS22340;Dbxref=GenBank:WP_059735504.1;Name=WP_059735504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754107.1;locus_tag=LDO38_RS22340;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_059735504.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 9494 10882 . - . ID=gene-LDO38_RS22345;Name=LDO38_RS22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22345;old_locus_tag=BVI2075_610010 NZ_CAJZAL010000165.1 Protein Homology CDS 9494 10882 . - 0 ID=cds-WP_014722202.1;Parent=gene-LDO38_RS22345;Dbxref=GenBank:WP_014722202.1;Name=WP_014722202.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015004074.1;locus_tag=LDO38_RS22345;product=L-serine ammonia-lyase;protein_id=WP_014722202.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 10913 12049 . - . ID=gene-LDO38_RS22350;Name=LDO38_RS22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22350;old_locus_tag=BVI2075_610011 NZ_CAJZAL010000165.1 Protein Homology CDS 10913 12049 . - 0 ID=cds-WP_045578623.1;Parent=gene-LDO38_RS22350;Dbxref=GenBank:WP_045578623.1;Name=WP_045578623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004545290.1;locus_tag=LDO38_RS22350;product=alginate lyase family protein;protein_id=WP_045578623.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 12201 15128 . - . ID=gene-LDO38_RS22355;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=LDO38_RS22355;old_locus_tag=BVI2075_610013 NZ_CAJZAL010000165.1 Protein Homology CDS 12201 15128 . - 0 ID=cds-WP_069246104.1;Parent=gene-LDO38_RS22355;Dbxref=GenBank:WP_069246104.1;Name=WP_069246104.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754104.1;locus_tag=LDO38_RS22355;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_069246104.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 15189 15569 . - . ID=gene-LDO38_RS22360;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=LDO38_RS22360;old_locus_tag=BVI2075_610014 NZ_CAJZAL010000165.1 Protein Homology CDS 15189 15569 . - 0 ID=cds-WP_011882851.1;Parent=gene-LDO38_RS22360;Dbxref=GenBank:WP_011882851.1;Name=WP_011882851.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759700.1;locus_tag=LDO38_RS22360;product=glycine cleavage system protein GcvH;protein_id=WP_011882851.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 15693 16811 . - . ID=gene-LDO38_RS22365;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=LDO38_RS22365;old_locus_tag=BVI2075_610015 NZ_CAJZAL010000165.1 Protein Homology CDS 15693 16811 . - 0 ID=cds-WP_059463002.1;Parent=gene-LDO38_RS22365;Dbxref=GenBank:WP_059463002.1;Name=WP_059463002.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010093063.1;locus_tag=LDO38_RS22365;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_059463002.1;transl_table=11 NZ_CAJZAL010000165.1 cmsearch riboswitch 16897 17029 . - . ID=id-NZ_CAJZAL010000165.1:16897..17029;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAL010000165.1 cmsearch riboswitch 17063 17165 . - . ID=id-NZ_CAJZAL010000165.1:17063..17165;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAL010000165.1 RefSeq gene 17277 17645 . - . ID=gene-LDO38_RS22370;Name=LDO38_RS22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22370;old_locus_tag=BVI2075_610017 NZ_CAJZAL010000165.1 Protein Homology CDS 17277 17645 . - 0 ID=cds-WP_059992204.1;Parent=gene-LDO38_RS22370;Dbxref=GenBank:WP_059992204.1;Name=WP_059992204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195883.1;locus_tag=LDO38_RS22370;product=hypothetical protein;protein_id=WP_059992204.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 17864 18916 . - . ID=gene-LDO38_RS22375;Name=LDO38_RS22375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22375;old_locus_tag=BVI2075_610018 NZ_CAJZAL010000165.1 Protein Homology CDS 17864 18916 . - 0 ID=cds-WP_059493677.1;Parent=gene-LDO38_RS22375;Dbxref=GenBank:WP_059493677.1;Name=WP_059493677.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401418.1;locus_tag=LDO38_RS22375;product=oxidoreductase;protein_id=WP_059493677.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 19242 19952 . - . ID=gene-LDO38_RS22380;Name=LDO38_RS22380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22380;old_locus_tag=BVI2075_610019 NZ_CAJZAL010000165.1 Protein Homology CDS 19242 19952 . - 0 ID=cds-WP_069246105.1;Parent=gene-LDO38_RS22380;Dbxref=GenBank:WP_069246105.1;Name=WP_069246105.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882855.1;locus_tag=LDO38_RS22380;product=SGNH/GDSL hydrolase family protein;protein_id=WP_069246105.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 20261 22348 . + . ID=gene-LDO38_RS22385;Name=LDO38_RS22385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22385;old_locus_tag=BVI2075_610020 NZ_CAJZAL010000165.1 Protein Homology CDS 20261 22348 . + 0 ID=cds-WP_011882856.1;Parent=gene-LDO38_RS22385;Dbxref=GenBank:WP_011882856.1;Name=WP_011882856.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751043.1;locus_tag=LDO38_RS22385;product=UvrD-helicase domain-containing protein;protein_id=WP_011882856.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 22463 23362 . - . ID=gene-LDO38_RS22390;Name=LDO38_RS22390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22390;old_locus_tag=BVI2075_610021 NZ_CAJZAL010000165.1 Protein Homology CDS 22463 23362 . - 0 ID=cds-WP_059474555.1;Parent=gene-LDO38_RS22390;Dbxref=GenBank:WP_059474555.1;Name=WP_059474555.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408293.1;locus_tag=LDO38_RS22390;product=c-type cytochrome;protein_id=WP_059474555.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 23621 23696 . + . ID=gene-LDO38_RS22395;Name=LDO38_RS22395;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS22395;old_locus_tag=BVI2075_TRNA14 NZ_CAJZAL010000165.1 tRNAscan-SE tRNA 23621 23696 . + . ID=rna-LDO38_RS22395;Parent=gene-LDO38_RS22395;anticodon=(pos:23654..23656);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS22395;product=tRNA-Arg NZ_CAJZAL010000165.1 tRNAscan-SE exon 23621 23696 . + . ID=exon-LDO38_RS22395-1;Parent=rna-LDO38_RS22395;anticodon=(pos:23654..23656);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS22395;product=tRNA-Arg NZ_CAJZAL010000165.1 RefSeq gene 24110 24535 . - . ID=gene-LDO38_RS22400;Name=LDO38_RS22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22400;old_locus_tag=BVI2075_610022 NZ_CAJZAL010000165.1 GeneMarkS-2+ CDS 24110 24535 . - 0 ID=cds-WP_041493721.1;Parent=gene-LDO38_RS22400;Dbxref=GenBank:WP_041493721.1;Name=WP_041493721.1;Ontology_term=GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS22400;product=RICIN domain-containing protein;protein_id=WP_041493721.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq pseudogene 24818 25578 . + . ID=gene-LDO38_RS22405;Name=LDO38_RS22405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS22405;partial=true;pseudo=true;start_range=.,24818 NZ_CAJZAL010000165.1 Protein Homology CDS 24818 25578 . + 0 ID=cds-LDO38_RS22405;Parent=gene-LDO38_RS22405;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408294.1;locus_tag=LDO38_RS22405;partial=true;product=TIGR04222 domain-containing membrane protein;pseudo=true;start_range=.,24818;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 25649 29017 . - . ID=gene-LDO38_RS22410;Name=LDO38_RS22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22410;old_locus_tag=BVI2075_610028 NZ_CAJZAL010000165.1 Protein Homology CDS 25649 29017 . - 0 ID=cds-WP_069246106.1;Parent=gene-LDO38_RS22410;Dbxref=GenBank:WP_069246106.1;Name=WP_069246106.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350571.1;locus_tag=LDO38_RS22410;product=glycosyltransferase;protein_id=WP_069246106.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 29020 30177 . - . ID=gene-LDO38_RS22415;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=LDO38_RS22415;old_locus_tag=BVI2075_610029 NZ_CAJZAL010000165.1 Protein Homology CDS 29020 30177 . - 0 ID=cds-WP_014722212.1;Parent=gene-LDO38_RS22415;Dbxref=GenBank:WP_014722212.1;Name=WP_014722212.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099338.1;locus_tag=LDO38_RS22415;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_014722212.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 30236 30883 . - . ID=gene-LDO38_RS22420;Name=LDO38_RS22420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22420;old_locus_tag=BVI2075_610030 NZ_CAJZAL010000165.1 Protein Homology CDS 30236 30883 . - 0 ID=cds-WP_014722213.1;Parent=gene-LDO38_RS22420;Dbxref=GenBank:WP_014722213.1;Name=WP_014722213.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722213.1;locus_tag=LDO38_RS22420;product=class I SAM-dependent methyltransferase;protein_id=WP_014722213.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 30894 31616 . - . ID=gene-LDO38_RS22425;Name=LDO38_RS22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22425;old_locus_tag=BVI2075_610031 NZ_CAJZAL010000165.1 Protein Homology CDS 30894 31616 . - 0 ID=cds-WP_124260126.1;Parent=gene-LDO38_RS22425;Dbxref=GenBank:WP_124260126.1;Name=WP_124260126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722214.1;locus_tag=LDO38_RS22425;product=WbqC family protein;protein_id=WP_124260126.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 31613 32998 . - . ID=gene-LDO38_RS22430;Name=LDO38_RS22430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22430;old_locus_tag=BVI2075_610032 NZ_CAJZAL010000165.1 Protein Homology CDS 31613 32998 . - 0 ID=cds-WP_224056639.1;Parent=gene-LDO38_RS22430;Dbxref=GenBank:WP_224056639.1;Name=WP_224056639.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751056.1;locus_tag=LDO38_RS22430;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_224056639.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 32995 33780 . - . ID=gene-LDO38_RS22435;Name=LDO38_RS22435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22435;old_locus_tag=BVI2075_610033 NZ_CAJZAL010000165.1 Protein Homology CDS 32995 33780 . - 0 ID=cds-WP_059561588.1;Parent=gene-LDO38_RS22435;Dbxref=GenBank:WP_059561588.1;Name=WP_059561588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722216.1;locus_tag=LDO38_RS22435;product=TylF/MycF/NovP-related O-methyltransferase;protein_id=WP_059561588.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 33925 34188 . - . ID=gene-LDO38_RS22440;Name=LDO38_RS22440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22440;old_locus_tag=BVI2075_610034 NZ_CAJZAL010000165.1 GeneMarkS-2+ CDS 33925 34188 . - 0 ID=cds-WP_041493726.1;Parent=gene-LDO38_RS22440;Dbxref=GenBank:WP_041493726.1;Name=WP_041493726.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS22440;product=hypothetical protein;protein_id=WP_041493726.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 34187 35974 . + . ID=gene-LDO38_RS22445;Name=LDO38_RS22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22445;old_locus_tag=BVI2075_610035 NZ_CAJZAL010000165.1 Protein Homology CDS 34187 35974 . + 0 ID=cds-WP_069246107.1;Parent=gene-LDO38_RS22445;Dbxref=GenBank:WP_069246107.1;Name=WP_069246107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099334.1;locus_tag=LDO38_RS22445;product=tetratricopeptide repeat protein;protein_id=WP_069246107.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 36231 38429 . + . ID=gene-LDO38_RS22450;Name=LDO38_RS22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22450;old_locus_tag=BVI2075_610036 NZ_CAJZAL010000165.1 Protein Homology CDS 36231 38429 . + 0 ID=cds-WP_069246108.1;Parent=gene-LDO38_RS22450;Dbxref=GenBank:WP_069246108.1;Name=WP_069246108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350577.1;locus_tag=LDO38_RS22450;product=tetratricopeptide repeat protein;protein_id=WP_069246108.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 38426 40912 . + . ID=gene-LDO38_RS22455;Name=LDO38_RS22455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22455;old_locus_tag=BVI2075_610037 NZ_CAJZAL010000165.1 Protein Homology CDS 38426 40912 . + 0 ID=cds-WP_069246109.1;Parent=gene-LDO38_RS22455;Dbxref=GenBank:WP_069246109.1;Name=WP_069246109.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722221.1;locus_tag=LDO38_RS22455;product=tetratricopeptide repeat protein;protein_id=WP_069246109.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 41134 41430 . - . ID=gene-LDO38_RS22460;Name=LDO38_RS22460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22460;old_locus_tag=BVI2075_610038 NZ_CAJZAL010000165.1 Protein Homology CDS 41134 41430 . - 0 ID=cds-WP_014722222.1;Parent=gene-LDO38_RS22460;Dbxref=GenBank:WP_014722222.1;Name=WP_014722222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722222.1;locus_tag=LDO38_RS22460;product=flagellar protein FliT;protein_id=WP_014722222.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 41454 42872 . - . ID=gene-LDO38_RS22465;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=LDO38_RS22465;old_locus_tag=BVI2075_610039 NZ_CAJZAL010000165.1 Protein Homology CDS 41454 42872 . - 0 ID=cds-WP_060091119.1;Parent=gene-LDO38_RS22465;Dbxref=GenBank:WP_060091119.1;Name=WP_060091119.1;Ontology_term=GO:0007155,GO:0009288;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722223.1;locus_tag=LDO38_RS22465;product=flagellar filament capping protein FliD;protein_id=WP_060091119.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 43062 43880 . - . ID=gene-LDO38_RS22470;Name=LDO38_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22470;old_locus_tag=BVI2075_610040 NZ_CAJZAL010000165.1 Protein Homology CDS 43062 43880 . - 0 ID=cds-WP_014722224.1;Parent=gene-LDO38_RS22470;Dbxref=GenBank:WP_014722224.1;Name=WP_014722224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010096443.1;locus_tag=LDO38_RS22470;product=flagellin domain-containing protein;protein_id=WP_014722224.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 44422 44634 . + . ID=gene-LDO38_RS22475;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=LDO38_RS22475;old_locus_tag=BVI2075_610041 NZ_CAJZAL010000165.1 Protein Homology CDS 44422 44634 . + 0 ID=cds-WP_006401410.1;Parent=gene-LDO38_RS22475;Dbxref=GenBank:WP_006401410.1;Name=WP_006401410.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198205.1;locus_tag=LDO38_RS22475;product=30S ribosomal protein S21;protein_id=WP_006401410.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 44884 45486 . - . ID=gene-LDO38_RS22480;Name=LDO38_RS22480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22480;old_locus_tag=BVI2075_610042 NZ_CAJZAL010000165.1 Protein Homology CDS 44884 45486 . - 0 ID=cds-WP_060091121.1;Parent=gene-LDO38_RS22480;Dbxref=GenBank:WP_060091121.1;Name=WP_060091121.1;Ontology_term=GO:0006284,GO:0008725;gbkey=CDS;go_function=DNA-3-methyladenine glycosylase activity|0008725||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401407.1;locus_tag=LDO38_RS22480;product=DNA-3-methyladenine glycosylase I;protein_id=WP_060091121.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 45628 46509 . + . ID=gene-LDO38_RS22485;Name=LDO38_RS22485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22485;old_locus_tag=BVI2075_610043 NZ_CAJZAL010000165.1 Protein Homology CDS 45628 46509 . + 0 ID=cds-WP_069246110.1;Parent=gene-LDO38_RS22485;Dbxref=GenBank:WP_069246110.1;Name=WP_069246110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760457.1;locus_tag=LDO38_RS22485;product=BadF/BadG/BcrA/BcrD ATPase family protein;protein_id=WP_069246110.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 46629 47462 . + . ID=gene-LDO38_RS22490;Name=LDO38_RS22490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22490;old_locus_tag=BVI2075_610044 NZ_CAJZAL010000165.1 Protein Homology CDS 46629 47462 . + 0 ID=cds-WP_069246111.1;Parent=gene-LDO38_RS22490;Dbxref=GenBank:WP_069246111.1;Name=WP_069246111.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895550.1;locus_tag=LDO38_RS22490;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_069246111.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 47568 48305 . - . ID=gene-LDO38_RS22495;Name=aqpZ;gbkey=Gene;gene=aqpZ;gene_biotype=protein_coding;locus_tag=LDO38_RS22495;old_locus_tag=BVI2075_610045 NZ_CAJZAL010000165.1 Protein Homology CDS 47568 48305 . - 0 ID=cds-WP_069246112.1;Parent=gene-LDO38_RS22495;Dbxref=GenBank:WP_069246112.1;Name=WP_069246112.1;Ontology_term=GO:0006833,GO:0015250;gbkey=CDS;gene=aqpZ;go_function=water channel activity|0015250||IEA;go_process=water transport|0006833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212508.1;locus_tag=LDO38_RS22495;product=aquaporin Z;protein_id=WP_069246112.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 48601 48897 . + . ID=gene-LDO38_RS22500;Name=LDO38_RS22500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22500;old_locus_tag=BVI2075_610046 NZ_CAJZAL010000165.1 Protein Homology CDS 48601 48897 . + 0 ID=cds-WP_011882898.1;Parent=gene-LDO38_RS22500;Dbxref=GenBank:WP_011882898.1;Name=WP_011882898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762906.1;locus_tag=LDO38_RS22500;product=H-NS histone family protein;protein_id=WP_011882898.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 49041 50105 . - . ID=gene-LDO38_RS22505;Name=LDO38_RS22505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22505;old_locus_tag=BVI2075_610047 NZ_CAJZAL010000165.1 Protein Homology CDS 49041 50105 . - 0 ID=cds-WP_069246113.1;Parent=gene-LDO38_RS22505;Dbxref=GenBank:WP_069246113.1;Name=WP_069246113.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415729.1;locus_tag=LDO38_RS22505;product=glycosyltransferase family 4 protein;protein_id=WP_069246113.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 50757 51077 . + . ID=gene-LDO38_RS22510;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=LDO38_RS22510;old_locus_tag=BVI2075_610051 NZ_CAJZAL010000165.1 Protein Homology CDS 50757 51077 . + 0 ID=cds-WP_034193026.1;Parent=gene-LDO38_RS22510;Dbxref=GenBank:WP_034193026.1;Name=WP_034193026.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198199.1;locus_tag=LDO38_RS22510;product=flagellar transcriptional regulator FlhD;protein_id=WP_034193026.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 51172 51726 . + . ID=gene-LDO38_RS22515;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=LDO38_RS22515;old_locus_tag=BVI2075_610053 NZ_CAJZAL010000165.1 Protein Homology CDS 51172 51726 . + 0 ID=cds-WP_011882902.1;Parent=gene-LDO38_RS22515;Dbxref=GenBank:WP_011882902.1;Name=WP_011882902.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760462.1;locus_tag=LDO38_RS22515;product=flagellar transcriptional regulator FlhC;protein_id=WP_011882902.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 51906 52766 . + . ID=gene-LDO38_RS22520;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=LDO38_RS22520;old_locus_tag=BVI2075_610054 NZ_CAJZAL010000165.1 Protein Homology CDS 51906 52766 . + 0 ID=cds-WP_011882903.1;Parent=gene-LDO38_RS22520;Dbxref=GenBank:WP_011882903.1;Name=WP_011882903.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013090904.1;locus_tag=LDO38_RS22520;product=flagellar motor stator protein MotA;protein_id=WP_011882903.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 52780 53796 . + . ID=gene-LDO38_RS22525;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=LDO38_RS22525;old_locus_tag=BVI2075_610055 NZ_CAJZAL010000165.1 Protein Homology CDS 52780 53796 . + 0 ID=cds-WP_011882904.1;Parent=gene-LDO38_RS22525;Dbxref=GenBank:WP_011882904.1;Name=WP_011882904.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895557.1;locus_tag=LDO38_RS22525;product=flagellar motor protein MotB;protein_id=WP_011882904.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 53820 54197 . + . ID=gene-LDO38_RS22530;Name=LDO38_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22530;old_locus_tag=BVI2075_610056 NZ_CAJZAL010000165.1 Protein Homology CDS 53820 54197 . + 0 ID=cds-WP_011882905.1;Parent=gene-LDO38_RS22530;Dbxref=GenBank:WP_011882905.1;Name=WP_011882905.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482646.1;locus_tag=LDO38_RS22530;product=response regulator;protein_id=WP_011882905.1;transl_table=11 NZ_CAJZAL010000165.1 RefSeq gene 54231 54654 . + . ID=gene-LDO38_RS22535;Name=LDO38_RS22535;end_range=54654,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22535;partial=true NZ_CAJZAL010000165.1 Protein Homology CDS 54231 54654 . + 0 ID=cds-WP_224056640.1;Parent=gene-LDO38_RS22535;Dbxref=GenBank:WP_224056640.1;Name=WP_224056640.1;Ontology_term=GO:0000160;end_range=54654,.;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023825.1;locus_tag=LDO38_RS22535;partial=true;product=Hpt domain-containing protein;protein_id=WP_224056640.1;transl_table=11 ##sequence-region NZ_CAJZAL010000166.1 1 102784 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000166.1 RefSeq region 1 102784 . + . ID=NZ_CAJZAL010000166.1:1..102784;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_62 NZ_CAJZAL010000166.1 RefSeq gene 1 258 . - . ID=gene-LDO38_RS22540;Name=LDO38_RS22540;end_range=258,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22540;partial=true;start_range=.,1 NZ_CAJZAL010000166.1 Protein Homology CDS 1 258 . - 0 ID=cds-WP_435520978.1;Parent=gene-LDO38_RS22540;Dbxref=GenBank:WP_435520978.1;Name=WP_435520978.1;end_range=258,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723459.1;locus_tag=LDO38_RS22540;partial=true;product=lysozyme inhibitor LprI family protein;protein_id=WP_435520978.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 314 2593 . - . ID=gene-LDO38_RS22545;Name=LDO38_RS22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22545;old_locus_tag=BVI2075_620002 NZ_CAJZAL010000166.1 Protein Homology CDS 314 2593 . - 0 ID=cds-WP_011885706.1;Parent=gene-LDO38_RS22545;Dbxref=GenBank:WP_011885706.1;Name=WP_011885706.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491304.1;locus_tag=LDO38_RS22545;product=arginine/lysine/ornithine decarboxylase;protein_id=WP_011885706.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 2675 3244 . - . ID=gene-LDO38_RS22550;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=LDO38_RS22550;old_locus_tag=BVI2075_620003 NZ_CAJZAL010000166.1 Protein Homology CDS 2675 3244 . - 0 ID=cds-WP_006398615.1;Parent=gene-LDO38_RS22550;Dbxref=GenBank:WP_006398615.1;Name=WP_006398615.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398615.1;locus_tag=LDO38_RS22550;product=dCTP deaminase;protein_id=WP_006398615.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 3360 3896 . - . ID=gene-LDO38_RS22555;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=LDO38_RS22555;old_locus_tag=BVI2075_620004 NZ_CAJZAL010000166.1 Protein Homology CDS 3360 3896 . - 0 ID=cds-WP_011885707.1;Parent=gene-LDO38_RS22555;Dbxref=GenBank:WP_011885707.1;Name=WP_011885707.1;gbkey=CDS;gene=sodC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493653.1;locus_tag=LDO38_RS22555;product=superoxide dismutase [Cu-Zn];protein_id=WP_011885707.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 4031 5122 . - . ID=gene-LDO38_RS22560;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=LDO38_RS22560;old_locus_tag=BVI2075_620005 NZ_CAJZAL010000166.1 Protein Homology CDS 4031 5122 . - 0 ID=cds-WP_034192601.1;Parent=gene-LDO38_RS22560;Dbxref=GenBank:WP_034192601.1;Name=WP_034192601.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600266.1;locus_tag=LDO38_RS22560;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_034192601.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 5475 6116 . + . ID=gene-LDO38_RS22565;Name=LDO38_RS22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22565;old_locus_tag=BVI2075_620006 NZ_CAJZAL010000166.1 Protein Homology CDS 5475 6116 . + 0 ID=cds-WP_011885709.1;Parent=gene-LDO38_RS22565;Dbxref=GenBank:WP_011885709.1;Name=WP_011885709.1;Ontology_term=GO:0015288,GO:0042834,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896346.1;locus_tag=LDO38_RS22565;product=OmpA family protein;protein_id=WP_011885709.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 6491 8656 . + . ID=gene-LDO38_RS22570;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=LDO38_RS22570;old_locus_tag=BVI2075_620008 NZ_CAJZAL010000166.1 Protein Homology CDS 6491 8656 . + 0 ID=cds-WP_069238562.1;Parent=gene-LDO38_RS22570;Dbxref=GenBank:WP_069238562.1;Name=WP_069238562.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657654.1;locus_tag=LDO38_RS22570;product=methionine--tRNA ligase;protein_id=WP_069238562.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 8754 12809 . - . ID=gene-LDO38_RS22575;Name=LDO38_RS22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22575;old_locus_tag=BVI2075_620009 NZ_CAJZAL010000166.1 Protein Homology CDS 8754 12809 . - 0 ID=cds-WP_224056641.1;Parent=gene-LDO38_RS22575;Dbxref=GenBank:WP_224056641.1;Name=WP_224056641.1;Ontology_term=GO:0009306,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478109.1;locus_tag=LDO38_RS22575;product=translocation/assembly module TamB domain-containing protein;protein_id=WP_224056641.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 12838 14667 . - . ID=gene-LDO38_RS22580;Name=LDO38_RS22580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22580;old_locus_tag=BVI2075_620010 NZ_CAJZAL010000166.1 Protein Homology CDS 12838 14667 . - 0 ID=cds-WP_224056642.1;Parent=gene-LDO38_RS22580;Dbxref=GenBank:WP_224056642.1;Name=WP_224056642.1;Ontology_term=GO:0009306,GO:0097347;gbkey=CDS;go_component=TAM protein secretion complex|0097347||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492817.1;locus_tag=LDO38_RS22580;product=autotransporter assembly complex protein TamA;protein_id=WP_224056642.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 14901 15089 . + . ID=gene-LDO38_RS22585;Name=LDO38_RS22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22585;old_locus_tag=BVI2075_620011 NZ_CAJZAL010000166.1 Protein Homology CDS 14901 15089 . + 0 ID=cds-WP_011885713.1;Parent=gene-LDO38_RS22585;Dbxref=GenBank:WP_011885713.1;Name=WP_011885713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333879.1;locus_tag=LDO38_RS22585;product=DUF3460 family protein;protein_id=WP_011885713.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 15094 15966 . + . ID=gene-LDO38_RS22590;Name=LDO38_RS22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22590;old_locus_tag=BVI2075_620012 NZ_CAJZAL010000166.1 Protein Homology CDS 15094 15966 . + 0 ID=cds-WP_011885714.1;Parent=gene-LDO38_RS22590;Dbxref=GenBank:WP_011885714.1;Name=WP_011885714.1;Ontology_term=GO:0007059,GO:0051301;gbkey=CDS;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102217.1;locus_tag=LDO38_RS22590;product=segregation and condensation protein A;protein_id=WP_011885714.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 16218 17057 . + . ID=gene-LDO38_RS22595;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=LDO38_RS22595;old_locus_tag=BVI2075_620013 NZ_CAJZAL010000166.1 Protein Homology CDS 16218 17057 . + 0 ID=cds-WP_011885715.1;Parent=gene-LDO38_RS22595;Dbxref=GenBank:WP_011885715.1;Name=WP_011885715.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352891.1;locus_tag=LDO38_RS22595;product=pantoate--beta-alanine ligase;protein_id=WP_011885715.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 17094 17480 . + . ID=gene-LDO38_RS22600;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=LDO38_RS22600;old_locus_tag=BVI2075_620014 NZ_CAJZAL010000166.1 Protein Homology CDS 17094 17480 . + 0 ID=cds-WP_011885716.1;Parent=gene-LDO38_RS22600;Dbxref=GenBank:WP_011885716.1;Name=WP_011885716.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006048527.1;locus_tag=LDO38_RS22600;product=aspartate 1-decarboxylase;protein_id=WP_011885716.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 17673 18332 . - . ID=gene-LDO38_RS22605;Name=LDO38_RS22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22605;old_locus_tag=BVI2075_620015 NZ_CAJZAL010000166.1 Protein Homology CDS 17673 18332 . - 0 ID=cds-WP_011885717.1;Parent=gene-LDO38_RS22605;Dbxref=GenBank:WP_011885717.1;Name=WP_011885717.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212899.1;locus_tag=LDO38_RS22605;product=ParA family protein;protein_id=WP_011885717.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 18487 18888 . - . ID=gene-LDO38_RS22610;Name=LDO38_RS22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22610;old_locus_tag=BVI2075_620016 NZ_CAJZAL010000166.1 Protein Homology CDS 18487 18888 . - 0 ID=cds-WP_014723466.1;Parent=gene-LDO38_RS22610;Dbxref=GenBank:WP_014723466.1;Name=WP_014723466.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885718.1;locus_tag=LDO38_RS22610;product=DoxX family protein;protein_id=WP_014723466.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 19171 20670 . - . ID=gene-LDO38_RS22615;Name=LDO38_RS22615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22615;old_locus_tag=BVI2075_620019 NZ_CAJZAL010000166.1 Protein Homology CDS 19171 20670 . - 0 ID=cds-WP_060044848.1;Parent=gene-LDO38_RS22615;Dbxref=GenBank:WP_060044848.1;Name=WP_060044848.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657662.1;locus_tag=LDO38_RS22615;product=cobyric acid synthase;protein_id=WP_060044848.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 20764 21324 . + . ID=gene-LDO38_RS22620;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=LDO38_RS22620;old_locus_tag=BVI2075_620018 NZ_CAJZAL010000166.1 Protein Homology CDS 20764 21324 . + 0 ID=cds-WP_059668399.1;Parent=gene-LDO38_RS22620;Dbxref=GenBank:WP_059668399.1;Name=WP_059668399.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364467.1;locus_tag=LDO38_RS22620;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_059668399.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 21318 22262 . + . ID=gene-LDO38_RS22625;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=LDO38_RS22625;old_locus_tag=BVI2075_620020 NZ_CAJZAL010000166.1 Protein Homology CDS 21318 22262 . + 0 ID=cds-WP_045578872.1;Parent=gene-LDO38_RS22625;Dbxref=GenBank:WP_045578872.1;Name=WP_045578872.1;Ontology_term=GO:0009236,GO:0048472,GO:0016020;gbkey=CDS;gene=cbiB;go_component=membrane|0016020||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352897.1;locus_tag=LDO38_RS22625;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WP_045578872.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 22255 23274 . + . ID=gene-LDO38_RS22630;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=LDO38_RS22630;old_locus_tag=BVI2075_620021 NZ_CAJZAL010000166.1 Protein Homology CDS 22255 23274 . + 0 ID=cds-WP_124259765.1;Parent=gene-LDO38_RS22630;Dbxref=GenBank:WP_124259765.1;Name=WP_124259765.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;gene=cobD;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329017.1;locus_tag=LDO38_RS22630;product=threonine-phosphate decarboxylase CobD;protein_id=WP_124259765.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 23271 24182 . + . ID=gene-LDO38_RS22635;Name=LDO38_RS22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22635;old_locus_tag=BVI2075_620022 NZ_CAJZAL010000166.1 Protein Homology CDS 23271 24182 . + 0 ID=cds-WP_069246391.1;Parent=gene-LDO38_RS22635;Dbxref=GenBank:WP_069246391.1;Name=WP_069246391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885723.1;locus_tag=LDO38_RS22635;product=cobalamin-binding protein;protein_id=WP_069246391.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 24228 24812 . - . ID=gene-LDO38_RS22640;Name=cobC;gbkey=Gene;gene=cobC;gene_biotype=protein_coding;locus_tag=LDO38_RS22640;old_locus_tag=BVI2075_620023 NZ_CAJZAL010000166.1 Protein Homology CDS 24228 24812 . - 0 ID=cds-WP_011885724.1;Parent=gene-LDO38_RS22640;Dbxref=GenBank:WP_011885724.1;Name=WP_011885724.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;gene=cobC;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484442.1;locus_tag=LDO38_RS22640;product=alpha-ribazole phosphatase;protein_id=WP_011885724.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 24797 25570 . - . ID=gene-LDO38_RS22645;Name=LDO38_RS22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22645;old_locus_tag=BVI2075_620024 NZ_CAJZAL010000166.1 Protein Homology CDS 24797 25570 . - 0 ID=cds-WP_059460517.1;Parent=gene-LDO38_RS22645;Dbxref=GenBank:WP_059460517.1;Name=WP_059460517.1;Ontology_term=GO:0051073;gbkey=CDS;go_function=adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212891.1;locus_tag=LDO38_RS22645;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_059460517.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 25563 26618 . - . ID=gene-LDO38_RS22650;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=LDO38_RS22650;old_locus_tag=BVI2075_620025 NZ_CAJZAL010000166.1 Protein Homology CDS 25563 26618 . - 0 ID=cds-WP_011885726.1;Parent=gene-LDO38_RS22650;Dbxref=GenBank:WP_011885726.1;Name=WP_011885726.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694361.1;locus_tag=LDO38_RS22650;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_011885726.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 26674 27471 . - . ID=gene-LDO38_RS22655;Name=LDO38_RS22655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22655;old_locus_tag=BVI2075_620026 NZ_CAJZAL010000166.1 Protein Homology CDS 26674 27471 . - 0 ID=cds-WP_011885727.1;Parent=gene-LDO38_RS22655;Dbxref=GenBank:WP_011885727.1;Name=WP_011885727.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885727.1;locus_tag=LDO38_RS22655;product=ABC transporter ATP-binding protein;protein_id=WP_011885727.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 27468 28475 . - . ID=gene-LDO38_RS22660;Name=LDO38_RS22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22660;old_locus_tag=BVI2075_620027 NZ_CAJZAL010000166.1 Protein Homology CDS 27468 28475 . - 0 ID=cds-WP_224056644.1;Parent=gene-LDO38_RS22660;Dbxref=GenBank:WP_224056644.1;Name=WP_224056644.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493438.1;locus_tag=LDO38_RS22660;product=FecCD family ABC transporter permease;protein_id=WP_224056644.1;transl_table=11 NZ_CAJZAL010000166.1 cmsearch riboswitch 28947 29201 . - . ID=id-NZ_CAJZAL010000166.1:28947..29201;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAL010000166.1 RefSeq gene 29367 29717 . + . ID=gene-LDO38_RS22665;Name=LDO38_RS22665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22665;old_locus_tag=BVI2075_620031 NZ_CAJZAL010000166.1 Protein Homology CDS 29367 29717 . + 0 ID=cds-WP_046425691.1;Parent=gene-LDO38_RS22665;Dbxref=GenBank:WP_046425691.1;Name=WP_046425691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600179.1;locus_tag=LDO38_RS22665;product=hypothetical protein;protein_id=WP_046425691.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 29714 30028 . + . ID=gene-LDO38_RS22670;Name=LDO38_RS22670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22670;old_locus_tag=BVI2075_620032 NZ_CAJZAL010000166.1 Protein Homology CDS 29714 30028 . + 0 ID=cds-WP_011885730.1;Parent=gene-LDO38_RS22670;Dbxref=GenBank:WP_011885730.1;Name=WP_011885730.1;Ontology_term=GO:0000917,GO:0000921,GO:0043093;gbkey=CDS;go_process=division septum assembly|0000917||IEA,septin ring assembly|0000921||IEA,FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024874.1;locus_tag=LDO38_RS22670;product=cell division protein ZapA;protein_id=WP_011885730.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 30121 30302 . + . ID=gene-LDO38_RS22675;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=LDO38_RS22675;old_locus_tag=BVI2075_MISCRNA39 NZ_CAJZAL010000166.1 cmsearch ncRNA 30121 30302 . + . ID=rna-LDO38_RS22675;Parent=gene-LDO38_RS22675;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO38_RS22675;product=6S RNA NZ_CAJZAL010000166.1 cmsearch exon 30121 30302 . + . ID=exon-LDO38_RS22675-1;Parent=rna-LDO38_RS22675;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO38_RS22675;product=6S RNA NZ_CAJZAL010000166.1 RefSeq gene 30373 30834 . + . ID=gene-LDO38_RS22680;Name=LDO38_RS22680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22680;old_locus_tag=BVI2075_620033 NZ_CAJZAL010000166.1 Protein Homology CDS 30373 30834 . + 0 ID=cds-WP_059460516.1;Parent=gene-LDO38_RS22680;Dbxref=GenBank:WP_059460516.1;Name=WP_059460516.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896324.1;locus_tag=LDO38_RS22680;product=EVE domain-containing protein;protein_id=WP_059460516.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 31015 31755 . + . ID=gene-LDO38_RS22685;Name=LDO38_RS22685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22685;old_locus_tag=BVI2075_620034 NZ_CAJZAL010000166.1 Protein Homology CDS 31015 31755 . + 0 ID=cds-WP_011885732.1;Parent=gene-LDO38_RS22685;Dbxref=GenBank:WP_011885732.1;Name=WP_011885732.1;Note=The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26%2C from Brucella%2C was shown to assemble into a channel-like structure%2C while YggE from E. coli has been associated with resistance to oxidative stress.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750009.1;locus_tag=LDO38_RS22685;product=SIMPL domain-containing protein;protein_id=WP_011885732.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 31894 32784 . - . ID=gene-LDO38_RS22690;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=LDO38_RS22690;old_locus_tag=BVI2075_620035 NZ_CAJZAL010000166.1 Protein Homology CDS 31894 32784 . - 0 ID=cds-WP_034192612.1;Parent=gene-LDO38_RS22690;Dbxref=GenBank:WP_034192612.1;Name=WP_034192612.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657673.1;locus_tag=LDO38_RS22690;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_034192612.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq pseudogene 32873 33273 . - . ID=gene-LDO38_RS22695;Name=LDO38_RS22695;end_range=33273,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS22695;partial=true;pseudo=true;start_range=.,32873 NZ_CAJZAL010000166.1 Protein Homology CDS 32873 33273 . - 0 ID=cds-LDO38_RS22695;Parent=gene-LDO38_RS22695;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=33273,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004555555.1;locus_tag=LDO38_RS22695;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,32873;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 33432 33761 . + . ID=gene-LDO38_RS22700;Name=LDO38_RS22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22700;old_locus_tag=BVI2075_620036 NZ_CAJZAL010000166.1 Protein Homology CDS 33432 33761 . + 0 ID=cds-WP_011885733.1;Parent=gene-LDO38_RS22700;Dbxref=GenBank:WP_011885733.1;Name=WP_011885733.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496118.1;locus_tag=LDO38_RS22700;product=c-type cytochrome;protein_id=WP_011885733.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 33907 34656 . - . ID=gene-LDO38_RS22705;Name=LDO38_RS22705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22705;old_locus_tag=BVI2075_620038 NZ_CAJZAL010000166.1 Protein Homology CDS 33907 34656 . - 0 ID=cds-WP_011885734.1;Parent=gene-LDO38_RS22705;Dbxref=GenBank:WP_011885734.1;Name=WP_011885734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478084.1;locus_tag=LDO38_RS22705;product=DUF2486 family protein;protein_id=WP_011885734.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 34682 35098 . - . ID=gene-LDO38_RS22710;Name=LDO38_RS22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22710;old_locus_tag=BVI2075_620039 NZ_CAJZAL010000166.1 Protein Homology CDS 34682 35098 . - 0 ID=cds-WP_011885735.1;Parent=gene-LDO38_RS22710;Dbxref=GenBank:WP_011885735.1;Name=WP_011885735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750016.1;locus_tag=LDO38_RS22710;product=DNA polymerase III subunit chi;protein_id=WP_011885735.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 35133 36644 . - . ID=gene-LDO38_RS22715;Name=LDO38_RS22715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22715;old_locus_tag=BVI2075_620040 NZ_CAJZAL010000166.1 Protein Homology CDS 35133 36644 . - 0 ID=cds-WP_011885736.1;Parent=gene-LDO38_RS22715;Dbxref=GenBank:WP_011885736.1;Name=WP_011885736.1;Ontology_term=GO:0019538,GO:0070006;gbkey=CDS;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352915.1;locus_tag=LDO38_RS22715;product=leucyl aminopeptidase;protein_id=WP_011885736.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 36767 37858 . + . ID=gene-LDO38_RS22720;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=LDO38_RS22720;old_locus_tag=BVI2075_620041 NZ_CAJZAL010000166.1 Protein Homology CDS 36767 37858 . + 0 ID=cds-WP_011885737.1;Parent=gene-LDO38_RS22720;Dbxref=GenBank:WP_011885737.1;Name=WP_011885737.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522573.1;locus_tag=LDO38_RS22720;product=LPS export ABC transporter permease LptF;protein_id=WP_011885737.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 37862 39010 . + . ID=gene-LDO38_RS22725;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=LDO38_RS22725;old_locus_tag=BVI2075_620043 NZ_CAJZAL010000166.1 Protein Homology CDS 37862 39010 . + 0 ID=cds-WP_011885738.1;Parent=gene-LDO38_RS22725;Dbxref=GenBank:WP_011885738.1;Name=WP_011885738.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009903370.1;locus_tag=LDO38_RS22725;product=LPS export ABC transporter permease LptG;protein_id=WP_011885738.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 39036 39419 . + . ID=gene-LDO38_RS22730;Name=LDO38_RS22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22730;old_locus_tag=BVI2075_620044 NZ_CAJZAL010000166.1 Protein Homology CDS 39036 39419 . + 0 ID=cds-WP_011885739.1;Parent=gene-LDO38_RS22730;Dbxref=GenBank:WP_011885739.1;Name=WP_011885739.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657682.1;locus_tag=LDO38_RS22730;product=sirohydrochlorin chelatase;protein_id=WP_011885739.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 39499 40248 . - . ID=gene-LDO38_RS22735;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=LDO38_RS22735;old_locus_tag=BVI2075_620045 NZ_CAJZAL010000166.1 Protein Homology CDS 39499 40248 . - 0 ID=cds-WP_011885740.1;Parent=gene-LDO38_RS22735;Dbxref=GenBank:WP_011885740.1;Name=WP_011885740.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750021.1;locus_tag=LDO38_RS22735;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_011885740.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 40326 41642 . - . ID=gene-LDO38_RS22740;Name=LDO38_RS22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22740;old_locus_tag=BVI2075_620046 NZ_CAJZAL010000166.1 Protein Homology CDS 40326 41642 . - 0 ID=cds-WP_059460515.1;Parent=gene-LDO38_RS22740;Dbxref=GenBank:WP_059460515.1;Name=WP_059460515.1;Ontology_term=GO:0006790,GO:0000166,GO:0003924,GO:0004781;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,GTPase activity|0003924||IEA,sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602383.1;locus_tag=LDO38_RS22740;product=sulfate adenylyltransferase subunit 1;protein_id=WP_059460515.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 41665 42627 . - . ID=gene-LDO38_RS22745;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=LDO38_RS22745;old_locus_tag=BVI2075_620047 NZ_CAJZAL010000166.1 Protein Homology CDS 41665 42627 . - 0 ID=cds-WP_034192618.1;Parent=gene-LDO38_RS22745;Dbxref=GenBank:WP_034192618.1;Name=WP_034192618.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010114318.1;locus_tag=LDO38_RS22745;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_034192618.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 42703 43449 . - . ID=gene-LDO38_RS22750;Name=LDO38_RS22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22750;old_locus_tag=BVI2075_620048 NZ_CAJZAL010000166.1 Protein Homology CDS 42703 43449 . - 0 ID=cds-WP_014723478.1;Parent=gene-LDO38_RS22750;Dbxref=GenBank:WP_014723478.1;Name=WP_014723478.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657686.1;locus_tag=LDO38_RS22750;product=phosphoadenylyl-sulfate reductase;protein_id=WP_014723478.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 43446 43988 . - . ID=gene-LDO38_RS22755;Name=LDO38_RS22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22755;old_locus_tag=BVI2075_620049 NZ_CAJZAL010000166.1 Protein Homology CDS 43446 43988 . - 0 ID=cds-WP_059567043.1;Parent=gene-LDO38_RS22755;Dbxref=GenBank:WP_059567043.1;Name=WP_059567043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892528.1;locus_tag=LDO38_RS22755;product=DUF934 domain-containing protein;protein_id=WP_059567043.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 44014 45693 . - . ID=gene-LDO38_RS22760;Name=LDO38_RS22760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22760;old_locus_tag=BVI2075_620050 NZ_CAJZAL010000166.1 Protein Homology CDS 44014 45693 . - 0 ID=cds-WP_011885745.1;Parent=gene-LDO38_RS22760;Dbxref=GenBank:WP_011885745.1;Name=WP_011885745.1;Ontology_term=GO:0016491,GO:0020037,GO:0046872,GO:0050311,GO:0051536,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA,sulfite reductase (ferredoxin) activity|0050311||IEA,iron-sulfur cluster binding|0051536||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601281.1;locus_tag=LDO38_RS22760;product=nitrite/sulfite reductase;protein_id=WP_011885745.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 45910 46851 . + . ID=gene-LDO38_RS22765;Name=LDO38_RS22765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22765;old_locus_tag=BVI2075_620051 NZ_CAJZAL010000166.1 Protein Homology CDS 45910 46851 . + 0 ID=cds-WP_011885746.1;Parent=gene-LDO38_RS22765;Dbxref=GenBank:WP_011885746.1;Name=WP_011885746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065144.1;locus_tag=LDO38_RS22765;product=CysB family HTH-type transcriptional regulator;protein_id=WP_011885746.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 46928 48085 . + . ID=gene-LDO38_RS22770;Name=LDO38_RS22770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22770;old_locus_tag=BVI2075_620052 NZ_CAJZAL010000166.1 Protein Homology CDS 46928 48085 . + 0 ID=cds-WP_011885747.1;Parent=gene-LDO38_RS22770;Dbxref=GenBank:WP_011885747.1;Name=WP_011885747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398570.1;locus_tag=LDO38_RS22770;product=ABC transporter substrate-binding protein;protein_id=WP_011885747.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 48183 48267 . + . ID=gene-LDO38_RS22775;Name=LDO38_RS22775;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS22775;old_locus_tag=BVI2075_TRNA15 NZ_CAJZAL010000166.1 tRNAscan-SE tRNA 48183 48267 . + . ID=rna-LDO38_RS22775;Parent=gene-LDO38_RS22775;anticodon=(pos:48217..48219);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS22775;product=tRNA-Leu NZ_CAJZAL010000166.1 tRNAscan-SE exon 48183 48267 . + . ID=exon-LDO38_RS22775-1;Parent=rna-LDO38_RS22775;anticodon=(pos:48217..48219);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS22775;product=tRNA-Leu NZ_CAJZAL010000166.1 RefSeq gene 48396 49298 . - . ID=gene-LDO38_RS22780;Name=LDO38_RS22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22780;old_locus_tag=BVI2075_620054 NZ_CAJZAL010000166.1 Protein Homology CDS 48396 49298 . - 0 ID=cds-WP_011885748.1;Parent=gene-LDO38_RS22780;Dbxref=GenBank:WP_011885748.1;Name=WP_011885748.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482979.1;locus_tag=LDO38_RS22780;product=LysR family transcriptional regulator;protein_id=WP_011885748.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 49419 50156 . + . ID=gene-LDO38_RS22785;Name=LDO38_RS22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22785;old_locus_tag=BVI2075_620056 NZ_CAJZAL010000166.1 Protein Homology CDS 49419 50156 . + 0 ID=cds-WP_059475187.1;Parent=gene-LDO38_RS22785;Dbxref=GenBank:WP_059475187.1;Name=WP_059475187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545991.1;locus_tag=LDO38_RS22785;product=SDR family oxidoreductase;protein_id=WP_059475187.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 50201 51100 . + . ID=gene-LDO38_RS22790;Name=LDO38_RS22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22790;old_locus_tag=BVI2075_620055 NZ_CAJZAL010000166.1 Protein Homology CDS 50201 51100 . + 0 ID=cds-WP_212173095.1;Parent=gene-LDO38_RS22790;Dbxref=GenBank:WP_212173095.1;Name=WP_212173095.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723482.1;locus_tag=LDO38_RS22790;product=SDR family oxidoreductase;protein_id=WP_212173095.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq pseudogene 51120 51248 . + . ID=gene-LDO38_RS22795;Name=LDO38_RS22795;end_range=51248,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS22795;partial=true;pseudo=true;start_range=.,51120 NZ_CAJZAL010000166.1 Protein Homology CDS 51120 51248 . + 0 ID=cds-LDO38_RS22795;Parent=gene-LDO38_RS22795;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=51248,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467681.1;locus_tag=LDO38_RS22795;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,51120;transl_table=11 NZ_CAJZAL010000166.1 RefSeq pseudogene 51242 51358 . - . ID=gene-LDO38_RS22800;Name=LDO38_RS22800;end_range=51358,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS22800;partial=true;pseudo=true;start_range=.,51242 NZ_CAJZAL010000166.1 Protein Homology CDS 51242 51358 . - 0 ID=cds-LDO38_RS22800;Parent=gene-LDO38_RS22800;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=51358,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545997.1;locus_tag=LDO38_RS22800;partial=true;product=DinB family protein;pseudo=true;start_range=.,51242;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 51465 52181 . + . ID=gene-LDO38_RS22805;Name=LDO38_RS22805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22805;old_locus_tag=BVI2075_620058 NZ_CAJZAL010000166.1 Protein Homology CDS 51465 52181 . + 0 ID=cds-WP_011885751.1;Parent=gene-LDO38_RS22805;Dbxref=GenBank:WP_011885751.1;Name=WP_011885751.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896298.1;locus_tag=LDO38_RS22805;product=pseudouridine synthase;protein_id=WP_011885751.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 52287 52475 . + . ID=gene-LDO38_RS22810;Name=LDO38_RS22810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22810;old_locus_tag=BVI2075_620059 NZ_CAJZAL010000166.1 Protein Homology CDS 52287 52475 . + 0 ID=cds-WP_011885752.1;Parent=gene-LDO38_RS22810;Dbxref=GenBank:WP_011885752.1;Name=WP_011885752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546000.1;locus_tag=LDO38_RS22810;product=hypothetical protein;protein_id=WP_011885752.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 52458 53495 . - . ID=gene-LDO38_RS22815;Name=LDO38_RS22815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22815;old_locus_tag=BVI2075_620060 NZ_CAJZAL010000166.1 Protein Homology CDS 52458 53495 . - 0 ID=cds-WP_011885753.1;Parent=gene-LDO38_RS22815;Dbxref=GenBank:WP_011885753.1;Name=WP_011885753.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492821.1;locus_tag=LDO38_RS22815;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_011885753.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 53602 54633 . + . ID=gene-LDO38_RS22820;Name=LDO38_RS22820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22820;old_locus_tag=BVI2075_620061 NZ_CAJZAL010000166.1 Protein Homology CDS 53602 54633 . + 0 ID=cds-WP_011885754.1;Parent=gene-LDO38_RS22820;Dbxref=GenBank:WP_011885754.1;Name=WP_011885754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413312.1;locus_tag=LDO38_RS22820;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;protein_id=WP_011885754.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 54926 56110 . + . ID=gene-LDO38_RS22825;Name=LDO38_RS22825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22825;old_locus_tag=BVI2075_620063 NZ_CAJZAL010000166.1 Protein Homology CDS 54926 56110 . + 0 ID=cds-WP_059463184.1;Parent=gene-LDO38_RS22825;Dbxref=GenBank:WP_059463184.1;Name=WP_059463184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522595.1;locus_tag=LDO38_RS22825;product=acetylornithine transaminase;protein_id=WP_059463184.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 56124 56579 . + . ID=gene-LDO38_RS22830;Name=LDO38_RS22830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22830;old_locus_tag=BVI2075_620064 NZ_CAJZAL010000166.1 Protein Homology CDS 56124 56579 . + 0 ID=cds-WP_011885756.1;Parent=gene-LDO38_RS22830;Dbxref=GenBank:WP_011885756.1;Name=WP_011885756.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757315.1;locus_tag=LDO38_RS22830;product=GNAT family acetyltransferase;protein_id=WP_011885756.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 56609 57280 . - . ID=gene-LDO38_RS22835;Name=LDO38_RS22835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22835;old_locus_tag=BVI2075_620065 NZ_CAJZAL010000166.1 Protein Homology CDS 56609 57280 . - 0 ID=cds-WP_224056645.1;Parent=gene-LDO38_RS22835;Dbxref=GenBank:WP_224056645.1;Name=WP_224056645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090952.1;locus_tag=LDO38_RS22835;product=DUF2278 family protein;protein_id=WP_224056645.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 57522 58238 . - . ID=gene-LDO38_RS22840;Name=LDO38_RS22840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22840;old_locus_tag=BVI2075_620067 NZ_CAJZAL010000166.1 Protein Homology CDS 57522 58238 . - 0 ID=cds-WP_011885758.1;Parent=gene-LDO38_RS22840;Dbxref=GenBank:WP_011885758.1;Name=WP_011885758.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478054.1;locus_tag=LDO38_RS22840;product=ABC transporter ATP-binding protein;protein_id=WP_011885758.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 58238 59014 . - . ID=gene-LDO38_RS22845;Name=LDO38_RS22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22845;old_locus_tag=BVI2075_620068 NZ_CAJZAL010000166.1 Protein Homology CDS 58238 59014 . - 0 ID=cds-WP_011885759.1;Parent=gene-LDO38_RS22845;Dbxref=GenBank:WP_011885759.1;Name=WP_011885759.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008351156.1;locus_tag=LDO38_RS22845;product=ABC transporter ATP-binding protein;protein_id=WP_011885759.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 59039 60208 . - . ID=gene-LDO38_RS22850;Name=LDO38_RS22850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22850;old_locus_tag=BVI2075_620069 NZ_CAJZAL010000166.1 Protein Homology CDS 59039 60208 . - 0 ID=cds-WP_011885760.1;Parent=gene-LDO38_RS22850;Dbxref=GenBank:WP_011885760.1;Name=WP_011885760.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478052.1;locus_tag=LDO38_RS22850;product=ABC transporter permease subunit;protein_id=WP_011885760.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 60228 61178 . - . ID=gene-LDO38_RS22855;Name=LDO38_RS22855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22855;old_locus_tag=BVI2075_620070 NZ_CAJZAL010000166.1 Protein Homology CDS 60228 61178 . - 0 ID=cds-WP_011885761.1;Parent=gene-LDO38_RS22855;Dbxref=GenBank:WP_011885761.1;Name=WP_011885761.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885761.1;locus_tag=LDO38_RS22855;product=branched-chain amino acid ABC transporter permease;protein_id=WP_011885761.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 61390 62223 . - . ID=gene-LDO38_RS22860;Name=LDO38_RS22860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22860;old_locus_tag=BVI2075_620071 NZ_CAJZAL010000166.1 Protein Homology CDS 61390 62223 . - 0 ID=cds-WP_011885762.1;Parent=gene-LDO38_RS22860;Dbxref=GenBank:WP_011885762.1;Name=WP_011885762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885762.1;locus_tag=LDO38_RS22860;product=hypothetical protein;protein_id=WP_011885762.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 62494 63474 . - . ID=gene-LDO38_RS22865;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=LDO38_RS22865;old_locus_tag=BVI2075_620073 NZ_CAJZAL010000166.1 Protein Homology CDS 62494 63474 . - 0 ID=cds-WP_011885763.1;Parent=gene-LDO38_RS22865;Dbxref=GenBank:WP_011885763.1;Name=WP_011885763.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892570.1;locus_tag=LDO38_RS22865;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_011885763.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 63477 63932 . - . ID=gene-LDO38_RS22870;Name=LDO38_RS22870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22870;old_locus_tag=BVI2075_620074 NZ_CAJZAL010000166.1 Protein Homology CDS 63477 63932 . - 0 ID=cds-WP_059455004.1;Parent=gene-LDO38_RS22870;Dbxref=GenBank:WP_059455004.1;Name=WP_059455004.1;Ontology_term=GO:0006457,GO:0003755,GO:0046872;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,metal ion binding|0046872||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892571.1;locus_tag=LDO38_RS22870;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_059455004.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 64068 64844 . + . ID=gene-LDO38_RS22875;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=LDO38_RS22875;old_locus_tag=BVI2075_620075 NZ_CAJZAL010000166.1 Protein Homology CDS 64068 64844 . + 0 ID=cds-WP_060044839.1;Parent=gene-LDO38_RS22875;Dbxref=GenBank:WP_060044839.1;Name=WP_060044839.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885765.1;locus_tag=LDO38_RS22875;product=RadC family protein;protein_id=WP_060044839.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 65084 65317 . + . ID=gene-LDO38_RS22880;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=LDO38_RS22880;old_locus_tag=BVI2075_620076 NZ_CAJZAL010000166.1 Protein Homology CDS 65084 65317 . + 0 ID=cds-WP_004186391.1;Parent=gene-LDO38_RS22880;Dbxref=GenBank:WP_004186391.1;Name=WP_004186391.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007586227.1;locus_tag=LDO38_RS22880;product=50S ribosomal protein L28;protein_id=WP_004186391.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 65335 65502 . + . ID=gene-LDO38_RS22885;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=LDO38_RS22885;old_locus_tag=BVI2075_620077 NZ_CAJZAL010000166.1 Protein Homology CDS 65335 65502 . + 0 ID=cds-WP_006478046.1;Parent=gene-LDO38_RS22885;Dbxref=GenBank:WP_006478046.1;Name=WP_006478046.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180630.1;locus_tag=LDO38_RS22885;product=50S ribosomal protein L33;protein_id=WP_006478046.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 65675 67261 . + . ID=gene-LDO38_RS22890;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=LDO38_RS22890;old_locus_tag=BVI2075_620078 NZ_CAJZAL010000166.1 Protein Homology CDS 65675 67261 . + 0 ID=cds-WP_011885766.1;Parent=gene-LDO38_RS22890;Dbxref=GenBank:WP_011885766.1;Name=WP_011885766.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885766.1;locus_tag=LDO38_RS22890;product=L-aspartate oxidase;protein_id=WP_011885766.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 67340 68221 . - . ID=gene-LDO38_RS22895;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=LDO38_RS22895;old_locus_tag=BVI2075_620079 NZ_CAJZAL010000166.1 Protein Homology CDS 67340 68221 . - 0 ID=cds-WP_045578847.1;Parent=gene-LDO38_RS22895;Dbxref=GenBank:WP_045578847.1;Name=WP_045578847.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329065.1;locus_tag=LDO38_RS22895;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_045578847.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 68218 69354 . - . ID=gene-LDO38_RS22900;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=LDO38_RS22900;old_locus_tag=BVI2075_620080 NZ_CAJZAL010000166.1 Protein Homology CDS 68218 69354 . - 0 ID=cds-WP_014723490.1;Parent=gene-LDO38_RS22900;Dbxref=GenBank:WP_014723490.1;Name=WP_014723490.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329066.1;locus_tag=LDO38_RS22900;product=quinolinate synthase NadA;protein_id=WP_014723490.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 69637 70833 . - . ID=gene-LDO38_RS22905;Name=LDO38_RS22905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22905;old_locus_tag=BVI2075_620081 NZ_CAJZAL010000166.1 Protein Homology CDS 69637 70833 . - 0 ID=cds-WP_069246302.1;Parent=gene-LDO38_RS22905;Dbxref=GenBank:WP_069246302.1;Name=WP_069246302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012434118.1;locus_tag=LDO38_RS22905;product=DesA family fatty acid desaturase;protein_id=WP_069246302.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 71053 72444 . - . ID=gene-LDO38_RS22910;Name=LDO38_RS22910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22910;old_locus_tag=BVI2075_620082 NZ_CAJZAL010000166.1 Protein Homology CDS 71053 72444 . - 0 ID=cds-WP_011885770.1;Parent=gene-LDO38_RS22910;Dbxref=GenBank:WP_011885770.1;Name=WP_011885770.1;Ontology_term=GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760013.1;locus_tag=LDO38_RS22910;product=mechanosensitive ion channel family protein;protein_id=WP_011885770.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 72463 73725 . - . ID=gene-LDO38_RS22915;Name=LDO38_RS22915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22915;old_locus_tag=BVI2075_620083 NZ_CAJZAL010000166.1 Protein Homology CDS 72463 73725 . - 0 ID=cds-WP_011885771.1;Parent=gene-LDO38_RS22915;Dbxref=GenBank:WP_011885771.1;Name=WP_011885771.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554551.1;locus_tag=LDO38_RS22915;product=RsmB/NOP family class I SAM-dependent RNA methyltransferase;protein_id=WP_011885771.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 73722 74384 . - . ID=gene-LDO38_RS22920;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=LDO38_RS22920;old_locus_tag=BVI2075_620084 NZ_CAJZAL010000166.1 Protein Homology CDS 73722 74384 . - 0 ID=cds-WP_011885772.1;Parent=gene-LDO38_RS22920;Dbxref=GenBank:WP_011885772.1;Name=WP_011885772.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892597.1;locus_tag=LDO38_RS22920;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_011885772.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 74507 75499 . + . ID=gene-LDO38_RS22925;Name=LDO38_RS22925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22925;old_locus_tag=BVI2075_620085 NZ_CAJZAL010000166.1 Protein Homology CDS 74507 75499 . + 0 ID=cds-WP_011885773.1;Parent=gene-LDO38_RS22925;Dbxref=GenBank:WP_011885773.1;Name=WP_011885773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750061.1;locus_tag=LDO38_RS22925;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_011885773.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 75602 78439 . + . ID=gene-LDO38_RS22930;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=LDO38_RS22930;old_locus_tag=BVI2075_620086 NZ_CAJZAL010000166.1 Protein Homology CDS 75602 78439 . + 0 ID=cds-WP_011885774.1;Parent=gene-LDO38_RS22930;Dbxref=GenBank:WP_011885774.1;Name=WP_011885774.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352960.1;locus_tag=LDO38_RS22930;product=isoleucine--tRNA ligase;protein_id=WP_011885774.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 78442 78942 . + . ID=gene-LDO38_RS22935;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=LDO38_RS22935;old_locus_tag=BVI2075_620087 NZ_CAJZAL010000166.1 Protein Homology CDS 78442 78942 . + 0 ID=cds-WP_011885775.1;Parent=gene-LDO38_RS22935;Dbxref=GenBank:WP_011885775.1;Name=WP_011885775.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333949.1;locus_tag=LDO38_RS22935;product=signal peptidase II;protein_id=WP_011885775.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 79010 80221 . + . ID=gene-LDO38_RS22940;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=LDO38_RS22940;old_locus_tag=BVI2075_620088 NZ_CAJZAL010000166.1 Protein Homology CDS 79010 80221 . + 0 ID=cds-WP_011885776.1;Parent=gene-LDO38_RS22940;Dbxref=GenBank:WP_011885776.1;Name=WP_011885776.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851204.1;locus_tag=LDO38_RS22940;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_011885776.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 80277 80723 . + . ID=gene-LDO38_RS22945;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=LDO38_RS22945;old_locus_tag=BVI2075_620089 NZ_CAJZAL010000166.1 Protein Homology CDS 80277 80723 . + 0 ID=cds-WP_011885777.1;Parent=gene-LDO38_RS22945;Dbxref=GenBank:WP_011885777.1;Name=WP_011885777.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602380.1;locus_tag=LDO38_RS22945;product=dUTP diphosphatase;protein_id=WP_011885777.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 80779 81549 . - . ID=gene-LDO38_RS22950;Name=LDO38_RS22950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22950;old_locus_tag=BVI2075_620090 NZ_CAJZAL010000166.1 Protein Homology CDS 80779 81549 . - 0 ID=cds-WP_011885778.1;Parent=gene-LDO38_RS22950;Dbxref=GenBank:WP_011885778.1;Name=WP_011885778.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329071.1;locus_tag=LDO38_RS22950;product=COG4705 family protein;protein_id=WP_011885778.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 81680 83059 . - . ID=gene-LDO38_RS22955;Name=LDO38_RS22955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22955;old_locus_tag=BVI2075_620091 NZ_CAJZAL010000166.1 Protein Homology CDS 81680 83059 . - 0 ID=cds-WP_045578846.1;Parent=gene-LDO38_RS22955;Dbxref=GenBank:WP_045578846.1;Name=WP_045578846.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488957.1;locus_tag=LDO38_RS22955;product=amino acid permease;protein_id=WP_045578846.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 83163 85463 . - . ID=gene-LDO38_RS22960;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=LDO38_RS22960;old_locus_tag=BVI2075_620092 NZ_CAJZAL010000166.1 Protein Homology CDS 83163 85463 . - 0 ID=cds-WP_011885780.1;Parent=gene-LDO38_RS22960;Dbxref=GenBank:WP_011885780.1;Name=WP_011885780.1;Ontology_term=GO:0006508,GO:0043335,GO:0004176,GO:0016887,GO:0009368;gbkey=CDS;gene=clpA;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546019.1;locus_tag=LDO38_RS22960;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_011885780.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 85460 85774 . - . ID=gene-LDO38_RS22965;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=LDO38_RS22965;old_locus_tag=BVI2075_620093 NZ_CAJZAL010000166.1 Protein Homology CDS 85460 85774 . - 0 ID=cds-WP_006398529.1;Parent=gene-LDO38_RS22965;Dbxref=GenBank:WP_006398529.1;Name=WP_006398529.1;gbkey=CDS;gene=clpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012080368.1;locus_tag=LDO38_RS22965;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_006398529.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 86321 86524 . + . ID=gene-LDO38_RS22970;Name=LDO38_RS22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22970;old_locus_tag=BVI2075_620095 NZ_CAJZAL010000166.1 Protein Homology CDS 86321 86524 . + 0 ID=cds-WP_004196460.1;Parent=gene-LDO38_RS22970;Dbxref=GenBank:WP_004196460.1;Name=WP_004196460.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016687461.1;locus_tag=LDO38_RS22970;product=cold-shock protein;protein_id=WP_004196460.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 86703 88301 . - . ID=gene-LDO38_RS22975;Name=LDO38_RS22975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22975;old_locus_tag=BVI2075_620096 NZ_CAJZAL010000166.1 Protein Homology CDS 86703 88301 . - 0 ID=cds-WP_175657787.1;Parent=gene-LDO38_RS22975;Dbxref=GenBank:WP_175657787.1;Name=WP_175657787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546020.1;locus_tag=LDO38_RS22975;product=multicopper oxidase family protein;protein_id=WP_175657787.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 88998 89222 . + . ID=gene-LDO38_RS22980;Name=LDO38_RS22980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22980;old_locus_tag=BVI2075_620097 NZ_CAJZAL010000166.1 Protein Homology CDS 88998 89222 . + 0 ID=cds-WP_011885782.1;Parent=gene-LDO38_RS22980;Dbxref=GenBank:WP_011885782.1;Name=WP_011885782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478028.1;locus_tag=LDO38_RS22980;product=hypothetical protein;protein_id=WP_011885782.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 89328 91556 . - . ID=gene-LDO38_RS22985;Name=LDO38_RS22985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22985;old_locus_tag=BVI2075_620098 NZ_CAJZAL010000166.1 Protein Homology CDS 89328 91556 . - 0 ID=cds-WP_011885783.1;Parent=gene-LDO38_RS22985;Dbxref=GenBank:WP_011885783.1;Name=WP_011885783.1;Ontology_term=GO:0006099,GO:0004450;gbkey=CDS;go_function=isocitrate dehydrogenase (NADP+) activity|0004450||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723497.1;locus_tag=LDO38_RS22985;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_011885783.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 91837 93093 . - . ID=gene-LDO38_RS22990;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=LDO38_RS22990;old_locus_tag=BVI2075_620099 NZ_CAJZAL010000166.1 Protein Homology CDS 91837 93093 . - 0 ID=cds-WP_011885784.1;Parent=gene-LDO38_RS22990;Dbxref=GenBank:WP_011885784.1;Name=WP_011885784.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069124.1;locus_tag=LDO38_RS22990;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_011885784.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 93378 93956 . + . ID=gene-LDO38_RS22995;Name=LDO38_RS22995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS22995;old_locus_tag=BVI2075_620101 NZ_CAJZAL010000166.1 Protein Homology CDS 93378 93956 . + 0 ID=cds-WP_011885785.1;Parent=gene-LDO38_RS22995;Dbxref=GenBank:WP_011885785.1;Name=WP_011885785.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0016866;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,intramolecular transferase activity|0016866||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885785.1;locus_tag=LDO38_RS22995;product=pseudouridine synthase;protein_id=WP_011885785.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 94258 94470 . + . ID=gene-LDO38_RS23000;Name=LDO38_RS23000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23000 NZ_CAJZAL010000166.1 Protein Homology CDS 94258 94470 . + 0 ID=cds-WP_072465376.1;Parent=gene-LDO38_RS23000;Dbxref=GenBank:WP_072465376.1;Name=WP_072465376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398520.1;locus_tag=LDO38_RS23000;product=hypothetical protein;protein_id=WP_072465376.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 94630 95130 . + . ID=gene-LDO38_RS23005;Name=LDO38_RS23005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23005;old_locus_tag=BVI2075_620103 NZ_CAJZAL010000166.1 Protein Homology CDS 94630 95130 . + 0 ID=cds-WP_014723499.1;Parent=gene-LDO38_RS23005;Dbxref=GenBank:WP_014723499.1;Name=WP_014723499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546024.1;locus_tag=LDO38_RS23005;product=DUF192 domain-containing protein;protein_id=WP_014723499.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 95348 97459 . + . ID=gene-LDO38_RS23010;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=LDO38_RS23010;old_locus_tag=BVI2075_620104 NZ_CAJZAL010000166.1 Protein Homology CDS 95348 97459 . + 0 ID=cds-WP_011885787.1;Parent=gene-LDO38_RS23010;Dbxref=GenBank:WP_011885787.1;Name=WP_011885787.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329077.1;locus_tag=LDO38_RS23010;product=elongation factor G;protein_id=WP_011885787.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 97628 98638 . + . ID=gene-LDO38_RS23015;Name=LDO38_RS23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23015;old_locus_tag=BVI2075_620105 NZ_CAJZAL010000166.1 Protein Homology CDS 97628 98638 . + 0 ID=cds-WP_059463205.1;Parent=gene-LDO38_RS23015;Dbxref=GenBank:WP_059463205.1;Name=WP_059463205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754590.1;locus_tag=LDO38_RS23015;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_059463205.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 98841 99686 . - . ID=gene-LDO38_RS23020;Name=LDO38_RS23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23020;old_locus_tag=BVI2075_620106 NZ_CAJZAL010000166.1 Protein Homology CDS 98841 99686 . - 0 ID=cds-WP_059890684.1;Parent=gene-LDO38_RS23020;Dbxref=GenBank:WP_059890684.1;Name=WP_059890684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398516.1;locus_tag=LDO38_RS23020;product=aldo/keto reductase;protein_id=WP_059890684.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 99844 100590 . + . ID=gene-LDO38_RS23025;Name=LDO38_RS23025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23025;old_locus_tag=BVI2075_620107 NZ_CAJZAL010000166.1 Protein Homology CDS 99844 100590 . + 0 ID=cds-WP_034192708.1;Parent=gene-LDO38_RS23025;Dbxref=GenBank:WP_034192708.1;Name=WP_034192708.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185897.1;locus_tag=LDO38_RS23025;product=GntR family transcriptional regulator;protein_id=WP_034192708.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 100612 102003 . - . ID=gene-LDO38_RS23030;Name=LDO38_RS23030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23030;old_locus_tag=BVI2075_620108 NZ_CAJZAL010000166.1 Protein Homology CDS 100612 102003 . - 0 ID=cds-WP_124259757.1;Parent=gene-LDO38_RS23030;Dbxref=GenBank:WP_124259757.1;Name=WP_124259757.1;Ontology_term=GO:0003824,GO:0008410;gbkey=CDS;go_function=catalytic activity|0003824||IEA,CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755663.1;locus_tag=LDO38_RS23030;product=CoA transferase;protein_id=WP_124259757.1;transl_table=11 NZ_CAJZAL010000166.1 RefSeq gene 102142 102784 . + . ID=gene-LDO38_RS23035;Name=LDO38_RS23035;end_range=102784,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23035;partial=true NZ_CAJZAL010000166.1 Protein Homology CDS 102142 102784 . + 0 ID=cds-WP_224056646.1;Parent=gene-LDO38_RS23035;Dbxref=GenBank:WP_224056646.1;Name=WP_224056646.1;Ontology_term=GO:0006355,GO:0003677;end_range=102784,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896256.1;locus_tag=LDO38_RS23035;partial=true;product=MerR family DNA-binding transcriptional regulator;protein_id=WP_224056646.1;transl_table=11 ##sequence-region NZ_CAJZAL010000167.1 1 15017 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000167.1 RefSeq region 1 15017 . + . ID=NZ_CAJZAL010000167.1:1..15017;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_63 NZ_CAJZAL010000167.1 RefSeq pseudogene 1 156 . - . ID=gene-LDO38_RS30635;Name=LDO38_RS30635;end_range=156,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30635;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000167.1 Protein Homology CDS 1 156 . - 2 ID=cds-LDO38_RS30635;Parent=gene-LDO38_RS30635;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=156,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365420.1;locus_tag=LDO38_RS30635;partial=true;product=FAD/NAD(P)-binding oxidoreductase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000167.1 RefSeq gene 167 708 . - . ID=gene-LDO38_RS23040;Name=LDO38_RS23040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23040;old_locus_tag=BVI2075_630002;partial=true;start_range=.,167 NZ_CAJZAL010000167.1 Protein Homology CDS 167 708 . - 0 ID=cds-WP_435520979.1;Parent=gene-LDO38_RS23040;Dbxref=GenBank:WP_435520979.1;Name=WP_435520979.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016348348.1;locus_tag=LDO38_RS23040;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_435520979.1;start_range=.,167;transl_table=11 NZ_CAJZAL010000167.1 RefSeq gene 705 1055 . - . ID=gene-LDO38_RS23045;Name=LDO38_RS23045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23045;old_locus_tag=BVI2075_630003 NZ_CAJZAL010000167.1 Protein Homology CDS 705 1055 . - 0 ID=cds-WP_011881408.1;Parent=gene-LDO38_RS23045;Dbxref=GenBank:WP_011881408.1;Name=WP_011881408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495622.1;locus_tag=LDO38_RS23045;product=(2Fe-2S)-binding protein;protein_id=WP_011881408.1;transl_table=11 NZ_CAJZAL010000167.1 RefSeq gene 1055 1849 . - . ID=gene-LDO38_RS23050;Name=LDO38_RS23050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23050;old_locus_tag=BVI2075_630004 NZ_CAJZAL010000167.1 Protein Homology CDS 1055 1849 . - 0 ID=cds-WP_011881409.1;Parent=gene-LDO38_RS23050;Dbxref=GenBank:WP_011881409.1;Name=WP_011881409.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020068159.1;locus_tag=LDO38_RS23050;product=ABC transporter permease;protein_id=WP_011881409.1;transl_table=11 NZ_CAJZAL010000167.1 RefSeq gene 1846 2829 . - . ID=gene-LDO38_RS23055;Name=LDO38_RS23055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23055;old_locus_tag=BVI2075_630005 NZ_CAJZAL010000167.1 Protein Homology CDS 1846 2829 . - 0 ID=cds-WP_059889744.1;Parent=gene-LDO38_RS23055;Dbxref=GenBank:WP_059889744.1;Name=WP_059889744.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365423.1;locus_tag=LDO38_RS23055;product=ABC transporter permease;protein_id=WP_059889744.1;transl_table=11 NZ_CAJZAL010000167.1 RefSeq gene 2830 3912 . - . ID=gene-LDO38_RS23060;Name=LDO38_RS23060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23060;old_locus_tag=BVI2075_630007 NZ_CAJZAL010000167.1 Protein Homology CDS 2830 3912 . - 0 ID=cds-WP_034194912.1;Parent=gene-LDO38_RS23060;Dbxref=GenBank:WP_034194912.1;Name=WP_034194912.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759615.1;locus_tag=LDO38_RS23060;product=ABC transporter ATP-binding protein;protein_id=WP_034194912.1;transl_table=11 NZ_CAJZAL010000167.1 RefSeq gene 4207 5082 . + . ID=gene-LDO38_RS23065;Name=LDO38_RS23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23065;old_locus_tag=BVI2075_630006 NZ_CAJZAL010000167.1 Protein Homology CDS 4207 5082 . + 0 ID=cds-WP_011881412.1;Parent=gene-LDO38_RS23065;Dbxref=GenBank:WP_011881412.1;Name=WP_011881412.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881412.1;locus_tag=LDO38_RS23065;product=IclR family transcriptional regulator;protein_id=WP_011881412.1;transl_table=11 NZ_CAJZAL010000167.1 RefSeq gene 5188 6750 . - . ID=gene-LDO38_RS23070;Name=LDO38_RS23070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23070;old_locus_tag=BVI2075_630008 NZ_CAJZAL010000167.1 Protein Homology CDS 5188 6750 . - 0 ID=cds-WP_059567524.1;Parent=gene-LDO38_RS23070;Dbxref=GenBank:WP_059567524.1;Name=WP_059567524.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759613.1;locus_tag=LDO38_RS23070;product=methyl-accepting chemotaxis protein;protein_id=WP_059567524.1;transl_table=11 NZ_CAJZAL010000167.1 RefSeq gene 7259 8272 . + . ID=gene-LDO38_RS23075;Name=LDO38_RS23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23075;old_locus_tag=BVI2075_630010 NZ_CAJZAL010000167.1 Protein Homology CDS 7259 8272 . + 0 ID=cds-WP_221417822.1;Parent=gene-LDO38_RS23075;Dbxref=GenBank:WP_221417822.1;Name=WP_221417822.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354190.1;locus_tag=LDO38_RS23075;product=SEL1-like repeat protein;protein_id=WP_221417822.1;transl_table=11 NZ_CAJZAL010000167.1 RefSeq gene 8318 8605 . + . ID=gene-LDO38_RS23080;Name=LDO38_RS23080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23080;old_locus_tag=BVI2075_630011 NZ_CAJZAL010000167.1 Protein Homology CDS 8318 8605 . + 0 ID=cds-WP_011881415.1;Parent=gene-LDO38_RS23080;Dbxref=GenBank:WP_011881415.1;Name=WP_011881415.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724501.1;locus_tag=LDO38_RS23080;product=PAAR domain-containing protein;protein_id=WP_011881415.1;transl_table=11 NZ_CAJZAL010000167.1 RefSeq gene 8705 9961 . - . ID=gene-LDO38_RS23085;Name=LDO38_RS23085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23085;old_locus_tag=BVI2075_630013 NZ_CAJZAL010000167.1 Protein Homology CDS 8705 9961 . - 0 ID=cds-WP_059735651.1;Parent=gene-LDO38_RS23085;Dbxref=GenBank:WP_059735651.1;Name=WP_059735651.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881416.1;locus_tag=LDO38_RS23085;product=cyanate transporter;protein_id=WP_059735651.1;transl_table=11 NZ_CAJZAL010000167.1 RefSeq gene 10121 10978 . - . ID=gene-LDO38_RS23090;Name=LDO38_RS23090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23090;old_locus_tag=BVI2075_630014 NZ_CAJZAL010000167.1 Protein Homology CDS 10121 10978 . - 0 ID=cds-WP_014724503.1;Parent=gene-LDO38_RS23090;Dbxref=GenBank:WP_014724503.1;Name=WP_014724503.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881417.1;locus_tag=LDO38_RS23090;product=helix-turn-helix transcriptional regulator;protein_id=WP_014724503.1;transl_table=11 NZ_CAJZAL010000167.1 RefSeq gene 11074 11967 . + . ID=gene-LDO38_RS23095;Name=LDO38_RS23095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23095;old_locus_tag=BVI2075_630015 NZ_CAJZAL010000167.1 Protein Homology CDS 11074 11967 . + 0 ID=cds-WP_069240594.1;Parent=gene-LDO38_RS23095;Dbxref=GenBank:WP_069240594.1;Name=WP_069240594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548354.1;locus_tag=LDO38_RS23095;product=SDR family oxidoreductase;protein_id=WP_069240594.1;transl_table=11 NZ_CAJZAL010000167.1 RefSeq gene 12212 13588 . - . ID=gene-LDO38_RS23100;Name=LDO38_RS23100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23100;old_locus_tag=BVI2075_630016 NZ_CAJZAL010000167.1 Protein Homology CDS 12212 13588 . - 0 ID=cds-WP_011881419.1;Parent=gene-LDO38_RS23100;Dbxref=GenBank:WP_011881419.1;Name=WP_011881419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356056.1;locus_tag=LDO38_RS23100;product=FAD-containing oxidoreductase;protein_id=WP_011881419.1;transl_table=11 NZ_CAJZAL010000167.1 RefSeq gene 13815 14453 . + . ID=gene-LDO38_RS23105;Name=LDO38_RS23105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23105;old_locus_tag=BVI2075_630017 NZ_CAJZAL010000167.1 Protein Homology CDS 13815 14453 . + 0 ID=cds-WP_011881420.1;Parent=gene-LDO38_RS23105;Dbxref=GenBank:WP_011881420.1;Name=WP_011881420.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338617.1;locus_tag=LDO38_RS23105;product=LysE family translocator;protein_id=WP_011881420.1;transl_table=11 NZ_CAJZAL010000167.1 RefSeq gene 14787 15017 . + . ID=gene-LDO38_RS23110;Name=LDO38_RS23110;end_range=15017,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23110;partial=true NZ_CAJZAL010000167.1 Protein Homology CDS 14787 15017 . + 0 ID=cds-WP_224056647.1;Parent=gene-LDO38_RS23110;Dbxref=GenBank:WP_224056647.1;Name=WP_224056647.1;end_range=15017,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479650.1;locus_tag=LDO38_RS23110;partial=true;product=DUF3348 family protein;protein_id=WP_224056647.1;transl_table=11 ##sequence-region NZ_CAJZAL010000168.1 1 143379 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000168.1 RefSeq region 1 143379 . + . ID=NZ_CAJZAL010000168.1:1..143379;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_64 NZ_CAJZAL010000168.1 RefSeq gene 305 1099 . - . ID=gene-LDO38_RS23115;Name=LDO38_RS23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23115;old_locus_tag=BVI2075_640002 NZ_CAJZAL010000168.1 Protein Homology CDS 305 1099 . - 0 ID=cds-WP_011883845.1;Parent=gene-LDO38_RS23115;Dbxref=GenBank:WP_011883845.1;Name=WP_011883845.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544895.1;locus_tag=LDO38_RS23115;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_011883845.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 1127 1780 . - . ID=gene-LDO38_RS23120;Name=LDO38_RS23120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23120;old_locus_tag=BVI2075_640003 NZ_CAJZAL010000168.1 Protein Homology CDS 1127 1780 . - 0 ID=cds-WP_011883843.1;Parent=gene-LDO38_RS23120;Dbxref=GenBank:WP_011883843.1;Name=WP_011883843.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016345956.1;locus_tag=LDO38_RS23120;product=methionine ABC transporter permease;protein_id=WP_011883843.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 1770 2804 . - . ID=gene-LDO38_RS23125;Name=LDO38_RS23125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23125;old_locus_tag=BVI2075_640004 NZ_CAJZAL010000168.1 Protein Homology CDS 1770 2804 . - 0 ID=cds-WP_034194145.1;Parent=gene-LDO38_RS23125;Dbxref=GenBank:WP_034194145.1;Name=WP_034194145.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889868.1;locus_tag=LDO38_RS23125;product=methionine ABC transporter ATP-binding protein;protein_id=WP_034194145.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 3021 3950 . + . ID=gene-LDO38_RS23130;Name=LDO38_RS23130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23130;old_locus_tag=BVI2075_640005 NZ_CAJZAL010000168.1 Protein Homology CDS 3021 3950 . + 0 ID=cds-WP_041493793.1;Parent=gene-LDO38_RS23130;Dbxref=GenBank:WP_041493793.1;Name=WP_041493793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883841.1;locus_tag=LDO38_RS23130;product=alpha/beta hydrolase;protein_id=WP_041493793.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 4075 4998 . - . ID=gene-LDO38_RS23135;Name=LDO38_RS23135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23135;old_locus_tag=BVI2075_640006 NZ_CAJZAL010000168.1 Protein Homology CDS 4075 4998 . - 0 ID=cds-WP_069246170.1;Parent=gene-LDO38_RS23135;Dbxref=GenBank:WP_069246170.1;Name=WP_069246170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889864.1;locus_tag=LDO38_RS23135;product=histone deacetylase family protein;protein_id=WP_069246170.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 5169 6392 . + . ID=gene-LDO38_RS23140;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=LDO38_RS23140;old_locus_tag=BVI2075_640007 NZ_CAJZAL010000168.1 Protein Homology CDS 5169 6392 . + 0 ID=cds-WP_011883839.1;Parent=gene-LDO38_RS23140;Dbxref=GenBank:WP_011883839.1;Name=WP_011883839.1;Ontology_term=GO:0009253,GO:0016757;gbkey=CDS;gene=mltB;go_function=glycosyltransferase activity|0016757||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722685.1;locus_tag=LDO38_RS23140;product=lytic murein transglycosylase B;protein_id=WP_011883839.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 6474 7376 . - . ID=gene-LDO38_RS23145;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=LDO38_RS23145;old_locus_tag=BVI2075_640008 NZ_CAJZAL010000168.1 Protein Homology CDS 6474 7376 . - 0 ID=cds-WP_011883837.1;Parent=gene-LDO38_RS23145;Dbxref=GenBank:WP_011883837.1;Name=WP_011883837.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476564.1;locus_tag=LDO38_RS23145;product=cysteine synthase CysM;protein_id=WP_011883837.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 7582 7929 . - . ID=gene-LDO38_RS23150;Name=LDO38_RS23150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23150;old_locus_tag=BVI2075_640009 NZ_CAJZAL010000168.1 Protein Homology CDS 7582 7929 . - 0 ID=cds-WP_034194143.1;Parent=gene-LDO38_RS23150;Dbxref=GenBank:WP_034194143.1;Name=WP_034194143.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750746.1;locus_tag=LDO38_RS23150;product=ComEA family DNA-binding protein;protein_id=WP_034194143.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 8003 8995 . - . ID=gene-LDO38_RS23155;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=LDO38_RS23155;old_locus_tag=BVI2075_640010 NZ_CAJZAL010000168.1 Protein Homology CDS 8003 8995 . - 0 ID=cds-WP_069246370.1;Parent=gene-LDO38_RS23155;Dbxref=GenBank:WP_069246370.1;Name=WP_069246370.1;Ontology_term=GO:0005975,GO:0009244,GO:0008712,GO:0050661;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA,NADP binding|0050661||IEA;go_process=carbohydrate metabolic process|0005975||IEA,lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904403.1;locus_tag=LDO38_RS23155;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_069246370.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 9059 10009 . - . ID=gene-LDO38_RS23160;Name=rfaE1;gbkey=Gene;gene=rfaE1;gene_biotype=protein_coding;locus_tag=LDO38_RS23160;old_locus_tag=BVI2075_640011 NZ_CAJZAL010000168.1 Protein Homology CDS 9059 10009 . - 0 ID=cds-WP_011883831.1;Parent=gene-LDO38_RS23160;Dbxref=GenBank:WP_011883831.1;Name=WP_011883831.1;Ontology_term=GO:0005975,GO:0016773,GO:0016779;gbkey=CDS;gene=rfaE1;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363349.1;locus_tag=LDO38_RS23160;product=D-glycero-beta-D-manno-heptose-7-phosphate kinase;protein_id=WP_011883831.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 10017 11417 . - . ID=gene-LDO38_RS23165;Name=LDO38_RS23165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23165;old_locus_tag=BVI2075_640012 NZ_CAJZAL010000168.1 Protein Homology CDS 10017 11417 . - 0 ID=cds-WP_069246169.1;Parent=gene-LDO38_RS23165;Dbxref=GenBank:WP_069246169.1;Name=WP_069246169.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363348.1;locus_tag=LDO38_RS23165;product=UDP-glucose dehydrogenase family protein;protein_id=WP_069246169.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 11507 12679 . - . ID=gene-LDO38_RS23170;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=LDO38_RS23170;old_locus_tag=BVI2075_640013 NZ_CAJZAL010000168.1 Protein Homology CDS 11507 12679 . - 0 ID=cds-WP_069246168.1;Parent=gene-LDO38_RS23170;Dbxref=GenBank:WP_069246168.1;Name=WP_069246168.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897725.1;locus_tag=LDO38_RS23170;product=lipopolysaccharide assembly protein LapB;protein_id=WP_069246168.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 12733 13026 . - . ID=gene-LDO38_RS23175;Name=LDO38_RS23175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23175;old_locus_tag=BVI2075_640014 NZ_CAJZAL010000168.1 Protein Homology CDS 12733 13026 . - 0 ID=cds-WP_011883826.1;Parent=gene-LDO38_RS23175;Dbxref=GenBank:WP_011883826.1;Name=WP_011883826.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195986.1;locus_tag=LDO38_RS23175;product=lipopolysaccharide assembly protein LapA domain-containing protein;protein_id=WP_011883826.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 13235 13558 . - . ID=gene-LDO38_RS23180;Name=LDO38_RS23180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23180;old_locus_tag=BVI2075_640015 NZ_CAJZAL010000168.1 Protein Homology CDS 13235 13558 . - 0 ID=cds-WP_006750752.1;Parent=gene-LDO38_RS23180;Dbxref=GenBank:WP_006750752.1;Name=WP_006750752.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486894.1;locus_tag=LDO38_RS23180;product=integration host factor subunit beta;protein_id=WP_006750752.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 13581 15293 . - . ID=gene-LDO38_RS23185;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=LDO38_RS23185;old_locus_tag=BVI2075_640016 NZ_CAJZAL010000168.1 Protein Homology CDS 13581 15293 . - 0 ID=cds-WP_034176254.1;Parent=gene-LDO38_RS23185;Dbxref=GenBank:WP_034176254.1;Name=WP_034176254.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025716.1;locus_tag=LDO38_RS23185;product=30S ribosomal protein S1;protein_id=WP_034176254.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 15434 16120 . - . ID=gene-LDO38_RS23190;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=LDO38_RS23190;old_locus_tag=BVI2075_640017 NZ_CAJZAL010000168.1 Protein Homology CDS 15434 16120 . - 0 ID=cds-WP_060122632.1;Parent=gene-LDO38_RS23190;Dbxref=GenBank:WP_060122632.1;Name=WP_060122632.1;Ontology_term=GO:0015949,GO:0005524;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189396.1;locus_tag=LDO38_RS23190;product=(d)CMP kinase;protein_id=WP_060122632.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 16134 17438 . - . ID=gene-LDO38_RS23195;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=LDO38_RS23195;old_locus_tag=BVI2075_640018 NZ_CAJZAL010000168.1 Protein Homology CDS 16134 17438 . - 0 ID=cds-WP_011883818.1;Parent=gene-LDO38_RS23195;Dbxref=GenBank:WP_011883818.1;Name=WP_011883818.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009921655.1;locus_tag=LDO38_RS23195;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_011883818.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 17452 18378 . - . ID=gene-LDO38_RS23200;Name=LDO38_RS23200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23200;old_locus_tag=BVI2075_640019 NZ_CAJZAL010000168.1 Protein Homology CDS 17452 18378 . - 0 ID=cds-WP_034194139.1;Parent=gene-LDO38_RS23200;Dbxref=GenBank:WP_034194139.1;Name=WP_034194139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486923.1;locus_tag=LDO38_RS23200;product=prephenate dehydrogenase;protein_id=WP_034194139.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 18572 19654 . - . ID=gene-LDO38_RS23205;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=LDO38_RS23205;old_locus_tag=BVI2075_640020 NZ_CAJZAL010000168.1 Protein Homology CDS 18572 19654 . - 0 ID=cds-WP_011883815.1;Parent=gene-LDO38_RS23205;Dbxref=GenBank:WP_011883815.1;Name=WP_011883815.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328120.1;locus_tag=LDO38_RS23205;product=prephenate dehydratase;protein_id=WP_011883815.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 19687 20769 . - . ID=gene-LDO38_RS23210;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=LDO38_RS23210;old_locus_tag=BVI2075_640021 NZ_CAJZAL010000168.1 Protein Homology CDS 19687 20769 . - 0 ID=cds-WP_034194138.1;Parent=gene-LDO38_RS23210;Dbxref=GenBank:WP_034194138.1;Name=WP_034194138.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476577.1;locus_tag=LDO38_RS23210;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_034194138.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 20944 21543 . - . ID=gene-LDO38_RS23215;Name=LDO38_RS23215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23215;old_locus_tag=BVI2075_640022 NZ_CAJZAL010000168.1 Protein Homology CDS 20944 21543 . - 0 ID=cds-WP_011883810.1;Parent=gene-LDO38_RS23215;Dbxref=GenBank:WP_011883810.1;Name=WP_011883810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009916801.1;locus_tag=LDO38_RS23215;product=DUF2059 domain-containing protein;protein_id=WP_011883810.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 21628 24231 . - . ID=gene-LDO38_RS23220;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=LDO38_RS23220;old_locus_tag=BVI2075_640023 NZ_CAJZAL010000168.1 Protein Homology CDS 21628 24231 . - 0 ID=cds-WP_045579347.1;Parent=gene-LDO38_RS23220;Dbxref=GenBank:WP_045579347.1;Name=WP_045579347.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764872.1;locus_tag=LDO38_RS23220;product=DNA gyrase subunit A;protein_id=WP_045579347.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 24769 25440 . + . ID=gene-LDO38_RS23225;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=LDO38_RS23225;old_locus_tag=BVI2075_640026 NZ_CAJZAL010000168.1 Protein Homology CDS 24769 25440 . + 0 ID=cds-WP_011883806.1;Parent=gene-LDO38_RS23225;Dbxref=GenBank:WP_011883806.1;Name=WP_011883806.1;Ontology_term=GO:0006811,GO:0015288;gbkey=CDS;gene=ompA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189892.1;locus_tag=LDO38_RS23225;product=outer membrane protein OmpA;protein_id=WP_011883806.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 25591 26289 . + . ID=gene-LDO38_RS23230;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=LDO38_RS23230;old_locus_tag=BVI2075_640027 NZ_CAJZAL010000168.1 Protein Homology CDS 25591 26289 . + 0 ID=cds-WP_011883804.1;Parent=gene-LDO38_RS23230;Dbxref=GenBank:WP_011883804.1;Name=WP_011883804.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486844.1;locus_tag=LDO38_RS23230;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_011883804.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 26303 27019 . + . ID=gene-LDO38_RS23235;Name=LDO38_RS23235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23235;old_locus_tag=BVI2075_640028 NZ_CAJZAL010000168.1 Protein Homology CDS 26303 27019 . + 0 ID=cds-WP_034194137.1;Parent=gene-LDO38_RS23235;Dbxref=GenBank:WP_034194137.1;Name=WP_034194137.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351325.1;locus_tag=LDO38_RS23235;product=HAD-IA family hydrolase;protein_id=WP_034194137.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 27037 27406 . + . ID=gene-LDO38_RS23240;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=LDO38_RS23240 NZ_CAJZAL010000168.1 cmsearch tmRNA 27037 27406 . + . ID=rna-LDO38_RS23240;Parent=gene-LDO38_RS23240;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO38_RS23240;product=transfer-messenger RNA NZ_CAJZAL010000168.1 cmsearch exon 27037 27406 . + . ID=exon-LDO38_RS23240-1;Parent=rna-LDO38_RS23240;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO38_RS23240;product=transfer-messenger RNA NZ_CAJZAL010000168.1 RefSeq gene 27946 28296 . - . ID=gene-LDO38_RS23245;Name=LDO38_RS23245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23245;old_locus_tag=BVI2075_640031 NZ_CAJZAL010000168.1 Protein Homology CDS 27946 28296 . - 0 ID=cds-WP_011883800.1;Parent=gene-LDO38_RS23245;Dbxref=GenBank:WP_011883800.1;Name=WP_011883800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897737.1;locus_tag=LDO38_RS23245;product=DUF4148 domain-containing protein;protein_id=WP_011883800.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 28574 28843 . - . ID=gene-LDO38_RS23250;Name=LDO38_RS23250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23250;old_locus_tag=BVI2075_640032 NZ_CAJZAL010000168.1 Protein Homology CDS 28574 28843 . - 0 ID=cds-WP_011883798.1;Parent=gene-LDO38_RS23250;Dbxref=GenBank:WP_011883798.1;Name=WP_011883798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883798.1;locus_tag=LDO38_RS23250;product=hypothetical protein;protein_id=WP_011883798.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 28945 30048 . - . ID=gene-LDO38_RS23255;Name=LDO38_RS23255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23255;old_locus_tag=BVI2075_640033 NZ_CAJZAL010000168.1 Protein Homology CDS 28945 30048 . - 0 ID=cds-WP_014722673.1;Parent=gene-LDO38_RS23255;Dbxref=GenBank:WP_014722673.1;Name=WP_014722673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656257.1;locus_tag=LDO38_RS23255;product=substrate-binding domain-containing protein;protein_id=WP_014722673.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 30180 30680 . + . ID=gene-LDO38_RS23260;Name=LDO38_RS23260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23260;old_locus_tag=BVI2075_640035 NZ_CAJZAL010000168.1 Protein Homology CDS 30180 30680 . + 0 ID=cds-WP_014722672.1;Parent=gene-LDO38_RS23260;Dbxref=GenBank:WP_014722672.1;Name=WP_014722672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904393.1;locus_tag=LDO38_RS23260;product=NAD(P)H-dependent oxidoreductase subunit E;protein_id=WP_014722672.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 30677 32254 . + . ID=gene-LDO38_RS23265;Name=LDO38_RS23265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23265;old_locus_tag=BVI2075_640034 NZ_CAJZAL010000168.1 Protein Homology CDS 30677 32254 . + 0 ID=cds-WP_059566985.1;Parent=gene-LDO38_RS23265;Dbxref=GenBank:WP_059566985.1;Name=WP_059566985.1;Ontology_term=GO:0051539,GO:0009326;gbkey=CDS;go_component=formate dehydrogenase complex|0009326||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544874.1;locus_tag=LDO38_RS23265;product=formate dehydrogenase beta subunit;protein_id=WP_059566985.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 32272 35223 . + . ID=gene-LDO38_RS23270;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=LDO38_RS23270;old_locus_tag=BVI2075_640036 NZ_CAJZAL010000168.1 Protein Homology CDS 32272 35223 . + 0 ID=cds-WP_069246167.1;Parent=gene-LDO38_RS23270;Dbxref=GenBank:WP_069246167.1;Name=WP_069246167.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363333.1;locus_tag=LDO38_RS23270;product=formate dehydrogenase subunit alpha;protein_id=WP_069246167.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 35231 35482 . + . ID=gene-LDO38_RS23275;Name=LDO38_RS23275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23275;old_locus_tag=BVI2075_640037 NZ_CAJZAL010000168.1 Protein Homology CDS 35231 35482 . + 0 ID=cds-WP_011883789.1;Parent=gene-LDO38_RS23275;Dbxref=GenBank:WP_011883789.1;Name=WP_011883789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750770.1;locus_tag=LDO38_RS23275;product=formate dehydrogenase subunit delta;protein_id=WP_011883789.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 35547 37214 . - . ID=gene-LDO38_RS23280;Name=LDO38_RS23280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23280;old_locus_tag=BVI2075_640038 NZ_CAJZAL010000168.1 Protein Homology CDS 35547 37214 . - 0 ID=cds-WP_011883788.1;Parent=gene-LDO38_RS23280;Dbxref=GenBank:WP_011883788.1;Name=WP_011883788.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756777.1;locus_tag=LDO38_RS23280;product=FAD-dependent monooxygenase;protein_id=WP_011883788.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 37345 39183 . + . ID=gene-LDO38_RS23285;Name=LDO38_RS23285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23285;old_locus_tag=BVI2075_640039 NZ_CAJZAL010000168.1 Protein Homology CDS 37345 39183 . + 0 ID=cds-WP_014722667.1;Parent=gene-LDO38_RS23285;Dbxref=GenBank:WP_014722667.1;Name=WP_014722667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722667.1;locus_tag=LDO38_RS23285;product=tetratricopeptide repeat protein;protein_id=WP_014722667.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 39256 40551 . - . ID=gene-LDO38_RS23290;Name=LDO38_RS23290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23290;old_locus_tag=BVI2075_640040 NZ_CAJZAL010000168.1 Protein Homology CDS 39256 40551 . - 0 ID=cds-WP_011883785.1;Parent=gene-LDO38_RS23290;Dbxref=GenBank:WP_011883785.1;Name=WP_011883785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883785.1;locus_tag=LDO38_RS23290;product=MFS transporter;protein_id=WP_011883785.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 40896 41816 . + . ID=gene-LDO38_RS23295;Name=LDO38_RS23295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23295;old_locus_tag=BVI2075_640041 NZ_CAJZAL010000168.1 Protein Homology CDS 40896 41816 . + 0 ID=cds-WP_011883783.1;Parent=gene-LDO38_RS23295;Dbxref=GenBank:WP_011883783.1;Name=WP_011883783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883783.1;locus_tag=LDO38_RS23295;product=hypothetical protein;protein_id=WP_011883783.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 41896 42591 . - . ID=gene-LDO38_RS23300;Name=LDO38_RS23300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23300;old_locus_tag=BVI2075_640042 NZ_CAJZAL010000168.1 Protein Homology CDS 41896 42591 . - 0 ID=cds-WP_011883781.1;Parent=gene-LDO38_RS23300;Dbxref=GenBank:WP_011883781.1;Name=WP_011883781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485520.1;locus_tag=LDO38_RS23300;product=DUF2968 domain-containing protein;protein_id=WP_011883781.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 42705 43877 . - . ID=gene-LDO38_RS23305;Name=LDO38_RS23305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23305;old_locus_tag=BVI2075_640043 NZ_CAJZAL010000168.1 Protein Homology CDS 42705 43877 . - 0 ID=cds-WP_059668153.1;Parent=gene-LDO38_RS23305;Dbxref=GenBank:WP_059668153.1;Name=WP_059668153.1;Ontology_term=GO:0016787,GO:0016811;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544866.1;locus_tag=LDO38_RS23305;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_059668153.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 44146 44826 . + . ID=gene-LDO38_RS23310;Name=LDO38_RS23310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23310;old_locus_tag=BVI2075_640044 NZ_CAJZAL010000168.1 Protein Homology CDS 44146 44826 . + 0 ID=cds-WP_014722662.1;Parent=gene-LDO38_RS23310;Dbxref=GenBank:WP_014722662.1;Name=WP_014722662.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722662.1;locus_tag=LDO38_RS23310;product=GntR family transcriptional regulator;protein_id=WP_014722662.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 44834 46210 . + . ID=gene-LDO38_RS23315;Name=LDO38_RS23315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23315;old_locus_tag=BVI2075_640045 NZ_CAJZAL010000168.1 Protein Homology CDS 44834 46210 . + 0 ID=cds-WP_014722661.1;Parent=gene-LDO38_RS23315;Dbxref=GenBank:WP_014722661.1;Name=WP_014722661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756770.1;locus_tag=LDO38_RS23315;product=amidase;protein_id=WP_014722661.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 46360 46872 . + . ID=gene-LDO38_RS23320;Name=LDO38_RS23320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23320;old_locus_tag=BVI2075_640046 NZ_CAJZAL010000168.1 Protein Homology CDS 46360 46872 . + 0 ID=cds-WP_011883773.1;Parent=gene-LDO38_RS23320;Dbxref=GenBank:WP_011883773.1;Name=WP_011883773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883773.1;locus_tag=LDO38_RS23320;product=disulfide bond formation protein B;protein_id=WP_011883773.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 47428 48432 . + . ID=gene-LDO38_RS23325;Name=xdhC;gbkey=Gene;gene=xdhC;gene_biotype=protein_coding;locus_tag=LDO38_RS23325;old_locus_tag=BVI2075_640047 NZ_CAJZAL010000168.1 Protein Homology CDS 47428 48432 . + 0 ID=cds-WP_059461244.1;Parent=gene-LDO38_RS23325;Dbxref=GenBank:WP_059461244.1;Name=WP_059461244.1;Ontology_term=GO:0009115,GO:0065003,GO:0043546;gbkey=CDS;gene=xdhC;go_function=molybdopterin cofactor binding|0043546||IEA;go_process=xanthine catabolic process|0009115||IEA,protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756768.1;locus_tag=LDO38_RS23325;product=xanthine dehydrogenase accessory protein XdhC;protein_id=WP_059461244.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 48451 49476 . + . ID=gene-LDO38_RS23330;Name=LDO38_RS23330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23330;old_locus_tag=BVI2075_640048 NZ_CAJZAL010000168.1 Protein Homology CDS 48451 49476 . + 0 ID=cds-WP_014722660.1;Parent=gene-LDO38_RS23330;Dbxref=GenBank:WP_014722660.1;Name=WP_014722660.1;Ontology_term=GO:0006146,GO:0000034;gbkey=CDS;go_function=adenine deaminase activity|0000034||IEA;go_process=adenine catabolic process|0006146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722660.1;locus_tag=LDO38_RS23330;product=adenosine deaminase;protein_id=WP_014722660.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 49917 51233 . + . ID=gene-LDO38_RS23335;Name=guaD;gbkey=Gene;gene=guaD;gene_biotype=protein_coding;locus_tag=LDO38_RS23335;old_locus_tag=BVI2075_640049 NZ_CAJZAL010000168.1 Protein Homology CDS 49917 51233 . + 0 ID=cds-WP_059560666.1;Parent=gene-LDO38_RS23335;Dbxref=GenBank:WP_059560666.1;Name=WP_059560666.1;Ontology_term=GO:0006147,GO:0008270,GO:0008892;gbkey=CDS;gene=guaD;go_function=zinc ion binding|0008270||IEA,guanine deaminase activity|0008892||IEA;go_process=guanine catabolic process|0006147||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363320.1;locus_tag=LDO38_RS23335;product=guanine deaminase;protein_id=WP_059560666.1;transl_table=11 NZ_CAJZAL010000168.1 cmsearch riboswitch 51332 51453 . + . ID=id-NZ_CAJZAL010000168.1:51332..51453;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAL010000168.1 RefSeq gene 51548 52120 . + . ID=gene-LDO38_RS23340;Name=LDO38_RS23340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23340;old_locus_tag=BVI2075_640051 NZ_CAJZAL010000168.1 Protein Homology CDS 51548 52120 . + 0 ID=cds-WP_224056648.1;Parent=gene-LDO38_RS23340;Dbxref=GenBank:WP_224056648.1;Name=WP_224056648.1;Ontology_term=GO:0030001,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189913.1;locus_tag=LDO38_RS23340;product=TMEM165/GDT1 family protein;protein_id=WP_224056648.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 52181 52882 . - . ID=gene-LDO38_RS23345;Name=LDO38_RS23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23345;old_locus_tag=BVI2075_640052 NZ_CAJZAL010000168.1 Protein Homology CDS 52181 52882 . - 0 ID=cds-WP_224056649.1;Parent=gene-LDO38_RS23345;Dbxref=GenBank:WP_224056649.1;Name=WP_224056649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753214.1;locus_tag=LDO38_RS23345;product=DUF4136 domain-containing protein;protein_id=WP_224056649.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 53069 55762 . + . ID=gene-LDO38_RS23350;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=LDO38_RS23350;old_locus_tag=BVI2075_640053 NZ_CAJZAL010000168.1 Protein Homology CDS 53069 55762 . + 0 ID=cds-WP_011883761.1;Parent=gene-LDO38_RS23350;Dbxref=GenBank:WP_011883761.1;Name=WP_011883761.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006050190.1;locus_tag=LDO38_RS23350;product=aminopeptidase N;protein_id=WP_011883761.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 55979 56992 . + . ID=gene-LDO38_RS23355;Name=LDO38_RS23355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23355;old_locus_tag=BVI2075_640054 NZ_CAJZAL010000168.1 Protein Homology CDS 55979 56992 . + 0 ID=cds-WP_011883759.1;Parent=gene-LDO38_RS23355;Dbxref=GenBank:WP_011883759.1;Name=WP_011883759.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400763.1;locus_tag=LDO38_RS23355;product=class 1 fructose-bisphosphatase;protein_id=WP_011883759.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 57204 57279 . + . ID=gene-LDO38_RS23360;Name=LDO38_RS23360;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS23360;old_locus_tag=BVI2075_TRNA16 NZ_CAJZAL010000168.1 tRNAscan-SE tRNA 57204 57279 . + . ID=rna-LDO38_RS23360;Parent=gene-LDO38_RS23360;anticodon=(pos:57237..57239);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS23360;product=tRNA-Thr NZ_CAJZAL010000168.1 tRNAscan-SE exon 57204 57279 . + . ID=exon-LDO38_RS23360-1;Parent=rna-LDO38_RS23360;anticodon=(pos:57237..57239);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS23360;product=tRNA-Thr NZ_CAJZAL010000168.1 RefSeq gene 57681 57935 . + . ID=gene-LDO38_RS23365;Name=LDO38_RS23365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23365;old_locus_tag=BVI2075_640056 NZ_CAJZAL010000168.1 Protein Homology CDS 57681 57935 . + 0 ID=cds-WP_006476609.1;Parent=gene-LDO38_RS23365;Dbxref=GenBank:WP_006476609.1;Name=WP_006476609.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897763.1;locus_tag=LDO38_RS23365;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_006476609.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 58021 58506 . - . ID=gene-LDO38_RS23370;Name=LDO38_RS23370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23370;old_locus_tag=BVI2075_640057 NZ_CAJZAL010000168.1 Protein Homology CDS 58021 58506 . - 0 ID=cds-WP_011883757.1;Parent=gene-LDO38_RS23370;Dbxref=GenBank:WP_011883757.1;Name=WP_011883757.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897764.1;locus_tag=LDO38_RS23370;product=TlpA family protein disulfide reductase;protein_id=WP_011883757.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 58503 59780 . - . ID=gene-LDO38_RS23375;Name=LDO38_RS23375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23375;old_locus_tag=BVI2075_640058 NZ_CAJZAL010000168.1 Protein Homology CDS 58503 59780 . - 0 ID=cds-WP_011883755.1;Parent=gene-LDO38_RS23375;Dbxref=GenBank:WP_011883755.1;Name=WP_011883755.1;Ontology_term=GO:0005975,GO:0004308;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897765.1;locus_tag=LDO38_RS23375;product=sialidase family protein;protein_id=WP_011883755.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 59768 62128 . - . ID=gene-LDO38_RS23380;Name=LDO38_RS23380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23380;old_locus_tag=BVI2075_640059 NZ_CAJZAL010000168.1 Protein Homology CDS 59768 62128 . - 0 ID=cds-WP_176153362.1;Parent=gene-LDO38_RS23380;Dbxref=GenBank:WP_176153362.1;Name=WP_176153362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656231.1;locus_tag=LDO38_RS23380;product=TonB-dependent receptor;protein_id=WP_176153362.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 62257 62646 . - . ID=gene-LDO38_RS23385;Name=LDO38_RS23385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23385;old_locus_tag=BVI2075_640060 NZ_CAJZAL010000168.1 Protein Homology CDS 62257 62646 . - 0 ID=cds-WP_043291644.1;Parent=gene-LDO38_RS23385;Dbxref=GenBank:WP_043291644.1;Name=WP_043291644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756196.1;locus_tag=LDO38_RS23385;product=DUF2946 domain-containing protein;protein_id=WP_043291644.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 62846 62992 . + . ID=gene-LDO38_RS23390;Name=LDO38_RS23390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23390 NZ_CAJZAL010000168.1 Protein Homology CDS 62846 62992 . + 0 ID=cds-WP_006476612.1;Parent=gene-LDO38_RS23390;Dbxref=GenBank:WP_006476612.1;Name=WP_006476612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010105617.1;locus_tag=LDO38_RS23390;product=hypothetical protein;protein_id=WP_006476612.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 63216 63809 . + . ID=gene-LDO38_RS23395;Name=LDO38_RS23395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23395;old_locus_tag=BVI2075_640062 NZ_CAJZAL010000168.1 Protein Homology CDS 63216 63809 . + 0 ID=cds-WP_011883744.1;Parent=gene-LDO38_RS23395;Dbxref=GenBank:WP_011883744.1;Name=WP_011883744.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476613.1;locus_tag=LDO38_RS23395;product=chorismate mutase;protein_id=WP_011883744.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 63846 64973 . - . ID=gene-LDO38_RS23400;Name=LDO38_RS23400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23400;old_locus_tag=BVI2075_640063 NZ_CAJZAL010000168.1 Protein Homology CDS 63846 64973 . - 0 ID=cds-WP_011883743.1;Parent=gene-LDO38_RS23400;Dbxref=GenBank:WP_011883743.1;Name=WP_011883743.1;Ontology_term=GO:0004527;gbkey=CDS;go_function=exonuclease activity|0004527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496574.1;locus_tag=LDO38_RS23400;product=exonuclease domain-containing protein;protein_id=WP_011883743.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 65134 65337 . - . ID=gene-LDO38_RS23405;Name=LDO38_RS23405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23405;old_locus_tag=BVI2075_640064 NZ_CAJZAL010000168.1 Protein Homology CDS 65134 65337 . - 0 ID=cds-WP_011883742.1;Parent=gene-LDO38_RS23405;Dbxref=GenBank:WP_011883742.1;Name=WP_011883742.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016687461.1;locus_tag=LDO38_RS23405;product=cold-shock protein;protein_id=WP_011883742.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 65729 65989 . + . ID=gene-LDO38_RS23410;Name=LDO38_RS23410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23410;old_locus_tag=BVI2075_640066 NZ_CAJZAL010000168.1 Protein Homology CDS 65729 65989 . + 0 ID=cds-WP_014722650.1;Parent=gene-LDO38_RS23410;Dbxref=GenBank:WP_014722650.1;Name=WP_014722650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722650.1;locus_tag=LDO38_RS23410;product=hypothetical protein;protein_id=WP_014722650.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 66510 67652 . + . ID=gene-LDO38_RS23415;Name=LDO38_RS23415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23415;old_locus_tag=BVI2075_640067 NZ_CAJZAL010000168.1 Protein Homology CDS 66510 67652 . + 0 ID=cds-WP_014722649.1;Parent=gene-LDO38_RS23415;Dbxref=GenBank:WP_014722649.1;Name=WP_014722649.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194869.1;locus_tag=LDO38_RS23415;product=porin;protein_id=WP_014722649.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 67738 68301 . - . ID=gene-LDO38_RS23420;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=LDO38_RS23420;old_locus_tag=BVI2075_640068 NZ_CAJZAL010000168.1 Protein Homology CDS 67738 68301 . - 0 ID=cds-WP_011883732.1;Parent=gene-LDO38_RS23420;Dbxref=GenBank:WP_011883732.1;Name=WP_011883732.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185709.1;locus_tag=LDO38_RS23420;product=transcription elongation factor GreB;protein_id=WP_011883732.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 68537 68613 . + . ID=gene-LDO38_RS23425;Name=LDO38_RS23425;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS23425;old_locus_tag=BVI2075_TRNA17 NZ_CAJZAL010000168.1 tRNAscan-SE tRNA 68537 68613 . + . ID=rna-LDO38_RS23425;Parent=gene-LDO38_RS23425;anticodon=(pos:68571..68573);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS23425;product=tRNA-Arg NZ_CAJZAL010000168.1 tRNAscan-SE exon 68537 68613 . + . ID=exon-LDO38_RS23425-1;Parent=rna-LDO38_RS23425;anticodon=(pos:68571..68573);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS23425;product=tRNA-Arg NZ_CAJZAL010000168.1 RefSeq gene 68675 68751 . + . ID=gene-LDO38_RS23430;Name=LDO38_RS23430;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS23430;old_locus_tag=BVI2075_TRNA18 NZ_CAJZAL010000168.1 tRNAscan-SE tRNA 68675 68751 . + . ID=rna-LDO38_RS23430;Parent=gene-LDO38_RS23430;anticodon=(pos:68709..68711);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS23430;product=tRNA-Arg NZ_CAJZAL010000168.1 tRNAscan-SE exon 68675 68751 . + . ID=exon-LDO38_RS23430-1;Parent=rna-LDO38_RS23430;anticodon=(pos:68709..68711);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS23430;product=tRNA-Arg NZ_CAJZAL010000168.1 RefSeq gene 68880 71246 . - . ID=gene-LDO38_RS23435;Name=LDO38_RS23435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23435;old_locus_tag=BVI2075_640070 NZ_CAJZAL010000168.1 Protein Homology CDS 68880 71246 . - 0 ID=cds-WP_011883730.1;Parent=gene-LDO38_RS23435;Dbxref=GenBank:WP_011883730.1;Name=WP_011883730.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194871.1;locus_tag=LDO38_RS23435;product=RelA/SpoT family protein;protein_id=WP_011883730.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 71310 71513 . - . ID=gene-LDO38_RS23440;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=LDO38_RS23440;old_locus_tag=BVI2075_640071 NZ_CAJZAL010000168.1 Protein Homology CDS 71310 71513 . - 0 ID=cds-WP_006025620.1;Parent=gene-LDO38_RS23440;Dbxref=GenBank:WP_006025620.1;Name=WP_006025620.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008921215.1;locus_tag=LDO38_RS23440;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_006025620.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 71572 72255 . - . ID=gene-LDO38_RS23445;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=LDO38_RS23445;old_locus_tag=BVI2075_640072 NZ_CAJZAL010000168.1 Protein Homology CDS 71572 72255 . - 0 ID=cds-WP_011883728.1;Parent=gene-LDO38_RS23445;Dbxref=GenBank:WP_011883728.1;Name=WP_011883728.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486663.1;locus_tag=LDO38_RS23445;product=guanylate kinase;protein_id=WP_011883728.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 72326 73249 . - . ID=gene-LDO38_RS23450;Name=LDO38_RS23450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23450;old_locus_tag=BVI2075_640073 NZ_CAJZAL010000168.1 Protein Homology CDS 72326 73249 . - 0 ID=cds-WP_011883726.1;Parent=gene-LDO38_RS23450;Dbxref=GenBank:WP_011883726.1;Name=WP_011883726.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333042.1;locus_tag=LDO38_RS23450;product=YicC/YloC family endoribonuclease;protein_id=WP_011883726.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 73424 74164 . + . ID=gene-LDO38_RS23455;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=LDO38_RS23455;old_locus_tag=BVI2075_640074 NZ_CAJZAL010000168.1 Protein Homology CDS 73424 74164 . + 0 ID=cds-WP_011883725.1;Parent=gene-LDO38_RS23455;Dbxref=GenBank:WP_011883725.1;Name=WP_011883725.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883725.1;locus_tag=LDO38_RS23455;product=ribonuclease PH;protein_id=WP_011883725.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 74157 74786 . + . ID=gene-LDO38_RS23460;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=LDO38_RS23460;old_locus_tag=BVI2075_640075 NZ_CAJZAL010000168.1 Protein Homology CDS 74157 74786 . + 0 ID=cds-WP_034194120.1;Parent=gene-LDO38_RS23460;Dbxref=GenBank:WP_034194120.1;Name=WP_034194120.1;Ontology_term=GO:0006281,GO:0035870,GO:0036222;gbkey=CDS;gene=rdgB;go_function=dITP diphosphatase activity|0035870||IEA,XTP diphosphatase activity|0036222||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656221.1;locus_tag=LDO38_RS23460;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=WP_034194120.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 74821 76035 . + . ID=gene-LDO38_RS23465;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=LDO38_RS23465;old_locus_tag=BVI2075_640076 NZ_CAJZAL010000168.1 Protein Homology CDS 74821 76035 . + 0 ID=cds-WP_045579366.1;Parent=gene-LDO38_RS23465;Dbxref=GenBank:WP_045579366.1;Name=WP_045579366.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496579.1;locus_tag=LDO38_RS23465;product=radical SAM family heme chaperone HemW;protein_id=WP_045579366.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 76079 76166 . + . ID=gene-LDO38_RS23470;Name=LDO38_RS23470;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS23470;old_locus_tag=BVI2075_TRNA19 NZ_CAJZAL010000168.1 tRNAscan-SE tRNA 76079 76166 . + . ID=rna-LDO38_RS23470;Parent=gene-LDO38_RS23470;anticodon=(pos:76113..76115);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS23470;product=tRNA-Ser NZ_CAJZAL010000168.1 tRNAscan-SE exon 76079 76166 . + . ID=exon-LDO38_RS23470-1;Parent=rna-LDO38_RS23470;anticodon=(pos:76113..76115);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS23470;product=tRNA-Ser NZ_CAJZAL010000168.1 RefSeq gene 76317 76718 . + . ID=gene-LDO38_RS23475;Name=LDO38_RS23475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23475;old_locus_tag=BVI2075_640077 NZ_CAJZAL010000168.1 Protein Homology CDS 76317 76718 . + 0 ID=cds-WP_011883719.1;Parent=gene-LDO38_RS23475;Dbxref=GenBank:WP_011883719.1;Name=WP_011883719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656219.1;locus_tag=LDO38_RS23475;product=hypothetical protein;protein_id=WP_011883719.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 76909 77202 . + . ID=gene-LDO38_RS23480;Name=LDO38_RS23480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23480;old_locus_tag=BVI2075_640078 NZ_CAJZAL010000168.1 Protein Homology CDS 76909 77202 . + 0 ID=cds-WP_011883717.1;Parent=gene-LDO38_RS23480;Dbxref=GenBank:WP_011883717.1;Name=WP_011883717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400790.1;locus_tag=LDO38_RS23480;product=hypothetical protein;protein_id=WP_011883717.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 77380 77871 . + . ID=gene-LDO38_RS23485;Name=LDO38_RS23485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23485;old_locus_tag=BVI2075_640079 NZ_CAJZAL010000168.1 Protein Homology CDS 77380 77871 . + 0 ID=cds-WP_011883716.1;Parent=gene-LDO38_RS23485;Dbxref=GenBank:WP_011883716.1;Name=WP_011883716.1;Ontology_term=GO:0031992,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=energy transducer activity|0031992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544846.1;locus_tag=LDO38_RS23485;product=energy transducer TonB family protein;protein_id=WP_011883716.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 78160 79470 . + . ID=gene-LDO38_RS23490;Name=LDO38_RS23490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23490;old_locus_tag=BVI2075_640080 NZ_CAJZAL010000168.1 Protein Homology CDS 78160 79470 . + 0 ID=cds-WP_224056650.1;Parent=gene-LDO38_RS23490;Dbxref=GenBank:WP_224056650.1;Name=WP_224056650.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722645.1;locus_tag=LDO38_RS23490;product=MFS transporter;protein_id=WP_224056650.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 79569 79748 . + . ID=gene-LDO38_RS23495;Name=LDO38_RS23495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23495;old_locus_tag=BVI2075_640081 NZ_CAJZAL010000168.1 Protein Homology CDS 79569 79748 . + 0 ID=cds-WP_011883712.1;Parent=gene-LDO38_RS23495;Dbxref=GenBank:WP_011883712.1;Name=WP_011883712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400794.1;locus_tag=LDO38_RS23495;product=hypothetical protein;protein_id=WP_011883712.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 79783 80781 . - . ID=gene-LDO38_RS23500;Name=waaC;gbkey=Gene;gene=waaC;gene_biotype=protein_coding;locus_tag=LDO38_RS23500;old_locus_tag=BVI2075_640082 NZ_CAJZAL010000168.1 Protein Homology CDS 79783 80781 . - 0 ID=cds-WP_041493787.1;Parent=gene-LDO38_RS23500;Dbxref=GenBank:WP_041493787.1;Name=WP_041493787.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=waaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750840.1;locus_tag=LDO38_RS23500;product=lipopolysaccharide heptosyltransferase I;protein_id=WP_041493787.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 80955 82541 . + . ID=gene-LDO38_RS23505;Name=LDO38_RS23505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23505;old_locus_tag=BVI2075_640083 NZ_CAJZAL010000168.1 Protein Homology CDS 80955 82541 . + 0 ID=cds-WP_059695214.1;Parent=gene-LDO38_RS23505;Dbxref=GenBank:WP_059695214.1;Name=WP_059695214.1;Ontology_term=GO:0006821,GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722643.1;locus_tag=LDO38_RS23505;product=chloride channel protein;protein_id=WP_059695214.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 82658 83059 . - . ID=gene-LDO38_RS23510;Name=LDO38_RS23510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23510;old_locus_tag=BVI2075_640084 NZ_CAJZAL010000168.1 Protein Homology CDS 82658 83059 . - 0 ID=cds-WP_060081905.1;Parent=gene-LDO38_RS23510;Dbxref=GenBank:WP_060081905.1;Name=WP_060081905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883705.1;locus_tag=LDO38_RS23510;product=YXWGXW repeat-containing protein;protein_id=WP_060081905.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 83219 83473 . - . ID=gene-LDO38_RS23515;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=LDO38_RS23515;old_locus_tag=BVI2075_640085 NZ_CAJZAL010000168.1 Protein Homology CDS 83219 83473 . - 0 ID=cds-WP_006400798.1;Parent=gene-LDO38_RS23515;Dbxref=GenBank:WP_006400798.1;Name=WP_006400798.1;gbkey=CDS;gene=minE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004628536.1;locus_tag=LDO38_RS23515;product=cell division topological specificity factor MinE;protein_id=WP_006400798.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 83486 84301 . - . ID=gene-LDO38_RS23520;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=LDO38_RS23520;old_locus_tag=BVI2075_640086 NZ_CAJZAL010000168.1 Protein Homology CDS 83486 84301 . - 0 ID=cds-WP_011883701.1;Parent=gene-LDO38_RS23520;Dbxref=GenBank:WP_011883701.1;Name=WP_011883701.1;Ontology_term=GO:0000918,GO:0016887;gbkey=CDS;gene=minD;go_function=ATP hydrolysis activity|0016887||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025606.1;locus_tag=LDO38_RS23520;product=septum site-determining protein MinD;protein_id=WP_011883701.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 84361 85131 . - . ID=gene-LDO38_RS23525;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=LDO38_RS23525;old_locus_tag=BVI2075_640087 NZ_CAJZAL010000168.1 Protein Homology CDS 84361 85131 . - 0 ID=cds-WP_011883699.1;Parent=gene-LDO38_RS23525;Dbxref=GenBank:WP_011883699.1;Name=WP_011883699.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186698.1;locus_tag=LDO38_RS23525;product=septum site-determining protein MinC;protein_id=WP_011883699.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 85299 85964 . - . ID=gene-LDO38_RS23530;Name=LDO38_RS23530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23530;old_locus_tag=BVI2075_640088 NZ_CAJZAL010000168.1 Protein Homology CDS 85299 85964 . - 0 ID=cds-WP_224056651.1;Parent=gene-LDO38_RS23530;Dbxref=GenBank:WP_224056651.1;Name=WP_224056651.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011402102.1;locus_tag=LDO38_RS23530;product=GNAT family N-acetyltransferase;protein_id=WP_224056651.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 86497 87657 . + . ID=gene-LDO38_RS23535;Name=LDO38_RS23535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23535;old_locus_tag=BVI2075_640089 NZ_CAJZAL010000168.1 Protein Homology CDS 86497 87657 . + 0 ID=cds-WP_034194113.1;Parent=gene-LDO38_RS23535;Dbxref=GenBank:WP_034194113.1;Name=WP_034194113.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722638.1;locus_tag=LDO38_RS23535;product=alkane 1-monooxygenase;protein_id=WP_034194113.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 87688 89223 . - . ID=gene-LDO38_RS23540;Name=LDO38_RS23540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23540;old_locus_tag=BVI2075_640091 NZ_CAJZAL010000168.1 Protein Homology CDS 87688 89223 . - 0 ID=cds-WP_069246164.1;Parent=gene-LDO38_RS23540;Dbxref=GenBank:WP_069246164.1;Name=WP_069246164.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883695.1;locus_tag=LDO38_RS23540;product=methyl-accepting chemotaxis protein;protein_id=WP_069246164.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 89469 89559 . - . ID=gene-LDO38_RS23545;Name=LDO38_RS23545;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS23545;old_locus_tag=BVI2075_TRNA35 NZ_CAJZAL010000168.1 tRNAscan-SE tRNA 89469 89559 . - . ID=rna-LDO38_RS23545;Parent=gene-LDO38_RS23545;anticodon=(pos:complement(89523..89525));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS23545;product=tRNA-Ser NZ_CAJZAL010000168.1 tRNAscan-SE exon 89469 89559 . - . ID=exon-LDO38_RS23545-1;Parent=rna-LDO38_RS23545;anticodon=(pos:complement(89523..89525));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS23545;product=tRNA-Ser NZ_CAJZAL010000168.1 RefSeq gene 89676 90977 . - . ID=gene-LDO38_RS23550;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=LDO38_RS23550;old_locus_tag=BVI2075_640092 NZ_CAJZAL010000168.1 Protein Homology CDS 89676 90977 . - 0 ID=cds-WP_014722636.1;Parent=gene-LDO38_RS23550;Dbxref=GenBank:WP_014722636.1;Name=WP_014722636.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904317.1;locus_tag=LDO38_RS23550;product=serine--tRNA ligase;protein_id=WP_014722636.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 91183 91449 . + . ID=gene-LDO38_RS23555;Name=LDO38_RS23555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23555;old_locus_tag=BVI2075_640093 NZ_CAJZAL010000168.1 Protein Homology CDS 91183 91449 . + 0 ID=cds-WP_069246163.1;Parent=gene-LDO38_RS23555;Dbxref=GenBank:WP_069246163.1;Name=WP_069246163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025601.1;locus_tag=LDO38_RS23555;product=DUF2164 domain-containing protein;protein_id=WP_069246163.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 91478 92788 . - . ID=gene-LDO38_RS23560;Name=LDO38_RS23560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23560;old_locus_tag=BVI2075_640094 NZ_CAJZAL010000168.1 Protein Homology CDS 91478 92788 . - 0 ID=cds-WP_069246162.1;Parent=gene-LDO38_RS23560;Dbxref=GenBank:WP_069246162.1;Name=WP_069246162.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333010.1;locus_tag=LDO38_RS23560;product=replication-associated recombination protein A;protein_id=WP_069246162.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 92957 93646 . - . ID=gene-LDO38_RS23565;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=LDO38_RS23565;old_locus_tag=BVI2075_640095 NZ_CAJZAL010000168.1 Protein Homology CDS 92957 93646 . - 0 ID=cds-WP_059455980.1;Parent=gene-LDO38_RS23565;Dbxref=GenBank:WP_059455980.1;Name=WP_059455980.1;gbkey=CDS;gene=lolA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750827.1;locus_tag=LDO38_RS23565;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_059455980.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 93693 96002 . - . ID=gene-LDO38_RS23570;Name=LDO38_RS23570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23570;old_locus_tag=BVI2075_640096 NZ_CAJZAL010000168.1 Protein Homology CDS 93693 96002 . - 0 ID=cds-WP_069246161.1;Parent=gene-LDO38_RS23570;Dbxref=GenBank:WP_069246161.1;Name=WP_069246161.1;Ontology_term=GO:0007059,GO:0051301,GO:0003677,GO:0005524,GO:0015616;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,DNA translocase activity|0015616||IEA;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186104.1;locus_tag=LDO38_RS23570;product=DNA translocase FtsK;protein_id=WP_069246161.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 96446 97408 . + . ID=gene-LDO38_RS23575;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=LDO38_RS23575;old_locus_tag=BVI2075_640098 NZ_CAJZAL010000168.1 Protein Homology CDS 96446 97408 . + 0 ID=cds-WP_043290850.1;Parent=gene-LDO38_RS23575;Dbxref=GenBank:WP_043290850.1;Name=WP_043290850.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333007.1;locus_tag=LDO38_RS23575;product=thioredoxin-disulfide reductase;protein_id=WP_043290850.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 97558 98337 . + . ID=gene-LDO38_RS23580;Name=LDO38_RS23580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23580;old_locus_tag=BVI2075_640097 NZ_CAJZAL010000168.1 Protein Homology CDS 97558 98337 . + 0 ID=cds-WP_014722631.1;Parent=gene-LDO38_RS23580;Dbxref=GenBank:WP_014722631.1;Name=WP_014722631.1;Ontology_term=GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897801.1;locus_tag=LDO38_RS23580;product=Smr/MutS family protein;protein_id=WP_014722631.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 98324 98947 . + . ID=gene-LDO38_RS23585;Name=LDO38_RS23585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23585;old_locus_tag=BVI2075_640099 NZ_CAJZAL010000168.1 Protein Homology CDS 98324 98947 . + 0 ID=cds-WP_045579373.1;Parent=gene-LDO38_RS23585;Dbxref=GenBank:WP_045579373.1;Name=WP_045579373.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333005.1;locus_tag=LDO38_RS23585;product=trimeric intracellular cation channel family protein;protein_id=WP_045579373.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 99058 100176 . - . ID=gene-LDO38_RS23590;Name=LDO38_RS23590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23590;old_locus_tag=BVI2075_640100 NZ_CAJZAL010000168.1 Protein Homology CDS 99058 100176 . - 0 ID=cds-WP_011883678.1;Parent=gene-LDO38_RS23590;Dbxref=GenBank:WP_011883678.1;Name=WP_011883678.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440516.1;locus_tag=LDO38_RS23590;product=ABC transporter ATP-binding protein;protein_id=WP_011883678.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 100287 101144 . - . ID=gene-LDO38_RS23595;Name=LDO38_RS23595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23595;old_locus_tag=BVI2075_640101 NZ_CAJZAL010000168.1 Protein Homology CDS 100287 101144 . - 0 ID=cds-WP_011883676.1;Parent=gene-LDO38_RS23595;Dbxref=GenBank:WP_011883676.1;Name=WP_011883676.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764932.1;locus_tag=LDO38_RS23595;product=carbohydrate ABC transporter permease;protein_id=WP_011883676.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 101134 102072 . - . ID=gene-LDO38_RS23600;Name=LDO38_RS23600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23600;old_locus_tag=BVI2075_640102 NZ_CAJZAL010000168.1 Protein Homology CDS 101134 102072 . - 0 ID=cds-WP_011883674.1;Parent=gene-LDO38_RS23600;Dbxref=GenBank:WP_011883674.1;Name=WP_011883674.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025593.1;locus_tag=LDO38_RS23600;product=carbohydrate ABC transporter permease;protein_id=WP_011883674.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 102211 103458 . - . ID=gene-LDO38_RS23605;Name=LDO38_RS23605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23605;old_locus_tag=BVI2075_640103 NZ_CAJZAL010000168.1 Protein Homology CDS 102211 103458 . - 0 ID=cds-WP_011883672.1;Parent=gene-LDO38_RS23605;Dbxref=GenBank:WP_011883672.1;Name=WP_011883672.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185848.1;locus_tag=LDO38_RS23605;product=ABC transporter substrate-binding protein;protein_id=WP_011883672.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 103886 105355 . + . ID=gene-LDO38_RS23610;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=LDO38_RS23610;old_locus_tag=BVI2075_640104 NZ_CAJZAL010000168.1 Protein Homology CDS 103886 105355 . + 0 ID=cds-WP_011883670.1;Parent=gene-LDO38_RS23610;Dbxref=GenBank:WP_011883670.1;Name=WP_011883670.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213936.1;locus_tag=LDO38_RS23610;product=glucose-6-phosphate dehydrogenase;protein_id=WP_011883670.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 105442 106122 . + . ID=gene-LDO38_RS23615;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=LDO38_RS23615;old_locus_tag=BVI2075_640106 NZ_CAJZAL010000168.1 Protein Homology CDS 105442 106122 . + 0 ID=cds-WP_059475595.1;Parent=gene-LDO38_RS23615;Dbxref=GenBank:WP_059475595.1;Name=WP_059475595.1;Ontology_term=GO:0005975,GO:0006098,GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=carbohydrate metabolic process|0005975||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722626.1;locus_tag=LDO38_RS23615;product=6-phosphogluconolactonase;protein_id=WP_059475595.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 106100 108028 . + . ID=gene-LDO38_RS23620;Name=LDO38_RS23620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23620;old_locus_tag=BVI2075_640107 NZ_CAJZAL010000168.1 Protein Homology CDS 106100 108028 . + 0 ID=cds-WP_011883666.1;Parent=gene-LDO38_RS23620;Dbxref=GenBank:WP_011883666.1;Name=WP_011883666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410513.1;locus_tag=LDO38_RS23620;product=bifunctional transcriptional regulator/glucokinase;protein_id=WP_011883666.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 108149 109366 . - . ID=gene-LDO38_RS23625;Name=LDO38_RS23625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23625;old_locus_tag=BVI2075_640108 NZ_CAJZAL010000168.1 Protein Homology CDS 108149 109366 . - 0 ID=cds-WP_011883664.1;Parent=gene-LDO38_RS23625;Dbxref=GenBank:WP_011883664.1;Name=WP_011883664.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755083.1;locus_tag=LDO38_RS23625;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_011883664.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 109629 110081 . + . ID=gene-LDO38_RS23630;Name=LDO38_RS23630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23630;old_locus_tag=BVI2075_640109 NZ_CAJZAL010000168.1 Protein Homology CDS 109629 110081 . + 0 ID=cds-WP_014722625.1;Parent=gene-LDO38_RS23630;Dbxref=GenBank:WP_014722625.1;Name=WP_014722625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764938.1;locus_tag=LDO38_RS23630;product=hypothetical protein;protein_id=WP_014722625.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 110305 111588 . + . ID=gene-LDO38_RS23635;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=LDO38_RS23635;old_locus_tag=BVI2075_640110 NZ_CAJZAL010000168.1 Protein Homology CDS 110305 111588 . + 0 ID=cds-WP_011883660.1;Parent=gene-LDO38_RS23635;Dbxref=GenBank:WP_011883660.1;Name=WP_011883660.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410509.1;locus_tag=LDO38_RS23635;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_011883660.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 111603 112724 . + . ID=gene-LDO38_RS23640;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=LDO38_RS23640;old_locus_tag=BVI2075_640111 NZ_CAJZAL010000168.1 Protein Homology CDS 111603 112724 . + 0 ID=cds-WP_011883658.1;Parent=gene-LDO38_RS23640;Dbxref=GenBank:WP_011883658.1;Name=WP_011883658.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412307.1;locus_tag=LDO38_RS23640;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_011883658.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 113110 113628 . + . ID=gene-LDO38_RS23645;Name=LDO38_RS23645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23645;old_locus_tag=BVI2075_640112 NZ_CAJZAL010000168.1 Protein Homology CDS 113110 113628 . + 0 ID=cds-WP_014722621.1;Parent=gene-LDO38_RS23645;Dbxref=GenBank:WP_014722621.1;Name=WP_014722621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363273.1;locus_tag=LDO38_RS23645;product=DUF1993 domain-containing protein;protein_id=WP_014722621.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 113843 114985 . + . ID=gene-LDO38_RS23650;Name=ribBA;gbkey=Gene;gene=ribBA;gene_biotype=protein_coding;locus_tag=LDO38_RS23650;old_locus_tag=BVI2075_640113 NZ_CAJZAL010000168.1 Protein Homology CDS 113843 114985 . + 0 ID=cds-WP_011883653.1;Parent=gene-LDO38_RS23650;Dbxref=GenBank:WP_011883653.1;Name=WP_011883653.1;Ontology_term=GO:0003935,GO:0008686;gbkey=CDS;gene=ribBA;go_function=GTP cyclohydrolase II activity|0003935||IEA,3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484241.1;locus_tag=LDO38_RS23650;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=WP_011883653.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 115039 115548 . + . ID=gene-LDO38_RS23655;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=LDO38_RS23655;old_locus_tag=BVI2075_640114 NZ_CAJZAL010000168.1 Protein Homology CDS 115039 115548 . + 0 ID=cds-WP_011883652.1;Parent=gene-LDO38_RS23655;Dbxref=GenBank:WP_011883652.1;Name=WP_011883652.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186056.1;locus_tag=LDO38_RS23655;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_011883652.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 115545 115982 . + . ID=gene-LDO38_RS23660;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=LDO38_RS23660;old_locus_tag=BVI2075_640115 NZ_CAJZAL010000168.1 Protein Homology CDS 115545 115982 . + 0 ID=cds-WP_011883649.1;Parent=gene-LDO38_RS23660;Dbxref=GenBank:WP_011883649.1;Name=WP_011883649.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185707.1;locus_tag=LDO38_RS23660;product=transcription antitermination factor NusB;protein_id=WP_011883649.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 116052 117248 . + . ID=gene-LDO38_RS23665;Name=LDO38_RS23665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23665;old_locus_tag=BVI2075_640116 NZ_CAJZAL010000168.1 Protein Homology CDS 116052 117248 . + 0 ID=cds-WP_014722619.1;Parent=gene-LDO38_RS23665;Dbxref=GenBank:WP_014722619.1;Name=WP_014722619.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476663.1;locus_tag=LDO38_RS23665;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_014722619.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 117360 118481 . - . ID=gene-LDO38_RS23670;Name=LDO38_RS23670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23670;old_locus_tag=BVI2075_640117 NZ_CAJZAL010000168.1 Protein Homology CDS 117360 118481 . - 0 ID=cds-WP_011883645.1;Parent=gene-LDO38_RS23670;Dbxref=GenBank:WP_011883645.1;Name=WP_011883645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400829.1;locus_tag=LDO38_RS23670;product=transglycosylase SLT domain-containing protein;protein_id=WP_011883645.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 119078 120634 . + . ID=gene-LDO38_RS23675;Name=LDO38_RS23675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23675;old_locus_tag=BVI2075_640119 NZ_CAJZAL010000168.1 Protein Homology CDS 119078 120634 . + 0 ID=cds-WP_011883644.1;Parent=gene-LDO38_RS23675;Dbxref=GenBank:WP_011883644.1;Name=WP_011883644.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897820.1;locus_tag=LDO38_RS23675;product=UbiD family decarboxylase;protein_id=WP_011883644.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 120693 121361 . + . ID=gene-LDO38_RS23680;Name=LDO38_RS23680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23680;old_locus_tag=BVI2075_640120 NZ_CAJZAL010000168.1 Protein Homology CDS 120693 121361 . + 0 ID=cds-WP_014722614.1;Parent=gene-LDO38_RS23680;Dbxref=GenBank:WP_014722614.1;Name=WP_014722614.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400831.1;locus_tag=LDO38_RS23680;product=LysE family translocator;protein_id=WP_014722614.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 121474 121767 . - . ID=gene-LDO38_RS23685;Name=LDO38_RS23685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23685;old_locus_tag=BVI2075_640121 NZ_CAJZAL010000168.1 Protein Homology CDS 121474 121767 . - 0 ID=cds-WP_014722613.1;Parent=gene-LDO38_RS23685;Dbxref=GenBank:WP_014722613.1;Name=WP_014722613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488565.1;locus_tag=LDO38_RS23685;product=hypothetical protein;protein_id=WP_014722613.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 122283 123212 . + . ID=gene-LDO38_RS23690;Name=LDO38_RS23690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23690;old_locus_tag=BVI2075_640122 NZ_CAJZAL010000168.1 Protein Homology CDS 122283 123212 . + 0 ID=cds-WP_224019298.1;Parent=gene-LDO38_RS23690;Dbxref=GenBank:WP_224019298.1;Name=WP_224019298.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496606.1;locus_tag=LDO38_RS23690;product=Rossmann-like and DUF2520 domain-containing protein;protein_id=WP_224019298.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 123289 123852 . + . ID=gene-LDO38_RS23695;Name=LDO38_RS23695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23695;old_locus_tag=BVI2075_640123 NZ_CAJZAL010000168.1 Protein Homology CDS 123289 123852 . + 0 ID=cds-WP_014722610.1;Parent=gene-LDO38_RS23695;Dbxref=GenBank:WP_014722610.1;Name=WP_014722610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010116661.1;locus_tag=LDO38_RS23695;product=YggT family protein;protein_id=WP_014722610.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 123862 124212 . - . ID=gene-LDO38_RS23700;Name=LDO38_RS23700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23700;old_locus_tag=BVI2075_640124 NZ_CAJZAL010000168.1 Protein Homology CDS 123862 124212 . - 0 ID=cds-WP_059455916.1;Parent=gene-LDO38_RS23700;Dbxref=GenBank:WP_059455916.1;Name=WP_059455916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883634.1;locus_tag=LDO38_RS23700;product=DUF190 domain-containing protein;protein_id=WP_059455916.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 124237 124623 . - . ID=gene-LDO38_RS23705;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=LDO38_RS23705;old_locus_tag=BVI2075_640125 NZ_CAJZAL010000168.1 Protein Homology CDS 124237 124623 . - 0 ID=cds-WP_011883633.1;Parent=gene-LDO38_RS23705;Dbxref=GenBank:WP_011883633.1;Name=WP_011883633.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522284.1;locus_tag=LDO38_RS23705;product=fluoride efflux transporter CrcB;protein_id=WP_011883633.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 124999 126210 . + . ID=gene-LDO38_RS23710;Name=LDO38_RS23710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23710;old_locus_tag=BVI2075_640126 NZ_CAJZAL010000168.1 Protein Homology CDS 124999 126210 . + 0 ID=cds-WP_059560638.1;Parent=gene-LDO38_RS23710;Dbxref=GenBank:WP_059560638.1;Name=WP_059560638.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476671.1;locus_tag=LDO38_RS23710;product=S53 family peptidase;protein_id=WP_059560638.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 126251 127117 . - . ID=gene-LDO38_RS23715;Name=LDO38_RS23715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23715;old_locus_tag=BVI2075_640128 NZ_CAJZAL010000168.1 Protein Homology CDS 126251 127117 . - 0 ID=cds-WP_011883629.1;Parent=gene-LDO38_RS23715;Dbxref=GenBank:WP_011883629.1;Name=WP_011883629.1;Ontology_term=GO:0008270,GO:0017136,GO:0046872,GO:0070403;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,histone deacetylase activity%2C NAD-dependent|0017136||IEA,metal ion binding|0046872||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722607.1;locus_tag=LDO38_RS23715;product=SIR2 family NAD-dependent protein deacylase;protein_id=WP_011883629.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 127309 127689 . - . ID=gene-LDO38_RS23720;Name=LDO38_RS23720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23720;old_locus_tag=BVI2075_640129 NZ_CAJZAL010000168.1 Protein Homology CDS 127309 127689 . - 0 ID=cds-WP_059695206.1;Parent=gene-LDO38_RS23720;Dbxref=GenBank:WP_059695206.1;Name=WP_059695206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722606.1;locus_tag=LDO38_RS23720;product=hypothetical protein;protein_id=WP_059695206.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 127686 128285 . - . ID=gene-LDO38_RS23725;Name=LDO38_RS23725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23725;old_locus_tag=BVI2075_640130 NZ_CAJZAL010000168.1 Protein Homology CDS 127686 128285 . - 0 ID=cds-WP_059567025.1;Parent=gene-LDO38_RS23725;Dbxref=GenBank:WP_059567025.1;Name=WP_059567025.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883625.1;locus_tag=LDO38_RS23725;product=NUDIX domain-containing protein;protein_id=WP_059567025.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 128367 129122 . + . ID=gene-LDO38_RS23730;Name=LDO38_RS23730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23730;old_locus_tag=BVI2075_640131 NZ_CAJZAL010000168.1 Protein Homology CDS 128367 129122 . + 0 ID=cds-WP_069246368.1;Parent=gene-LDO38_RS23730;Dbxref=GenBank:WP_069246368.1;Name=WP_069246368.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897830.1;locus_tag=LDO38_RS23730;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_069246368.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 129228 129827 . + . ID=gene-LDO38_RS23735;Name=LDO38_RS23735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23735;old_locus_tag=BVI2075_640132 NZ_CAJZAL010000168.1 Protein Homology CDS 129228 129827 . + 0 ID=cds-WP_041493782.1;Parent=gene-LDO38_RS23735;Dbxref=GenBank:WP_041493782.1;Name=WP_041493782.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883621.1;locus_tag=LDO38_RS23735;product=chromate transporter;protein_id=WP_041493782.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 129824 130360 . + . ID=gene-LDO38_RS23740;Name=LDO38_RS23740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23740;old_locus_tag=BVI2075_640133 NZ_CAJZAL010000168.1 Protein Homology CDS 129824 130360 . + 0 ID=cds-WP_011883619.1;Parent=gene-LDO38_RS23740;Dbxref=GenBank:WP_011883619.1;Name=WP_011883619.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722602.1;locus_tag=LDO38_RS23740;product=chromate transporter;protein_id=WP_011883619.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 130699 130974 . + . ID=gene-LDO38_RS23745;Name=LDO38_RS23745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23745;old_locus_tag=BVI2075_640135 NZ_CAJZAL010000168.1 Protein Homology CDS 130699 130974 . + 0 ID=cds-WP_014722601.1;Parent=gene-LDO38_RS23745;Dbxref=GenBank:WP_014722601.1;Name=WP_014722601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722601.1;locus_tag=LDO38_RS23745;product=hypothetical protein;protein_id=WP_014722601.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 131042 131251 . + . ID=gene-LDO38_RS23750;Name=LDO38_RS23750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23750;old_locus_tag=BVI2075_640136 NZ_CAJZAL010000168.1 Protein Homology CDS 131042 131251 . + 0 ID=cds-WP_011883615.1;Parent=gene-LDO38_RS23750;Dbxref=GenBank:WP_011883615.1;Name=WP_011883615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336971.1;locus_tag=LDO38_RS23750;product=hypothetical protein;protein_id=WP_011883615.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 131285 131497 . + . ID=gene-LDO38_RS23755;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=LDO38_RS23755;old_locus_tag=BVI2075_640137 NZ_CAJZAL010000168.1 Protein Homology CDS 131285 131497 . + 0 ID=cds-WP_011883613.1;Parent=gene-LDO38_RS23755;Dbxref=GenBank:WP_011883613.1;Name=WP_011883613.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202502.1;locus_tag=LDO38_RS23755;product=30S ribosomal protein S21;protein_id=WP_011883613.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 131508 131711 . + . ID=gene-LDO38_RS23760;Name=LDO38_RS23760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23760;old_locus_tag=BVI2075_640138 NZ_CAJZAL010000168.1 Protein Homology CDS 131508 131711 . + 0 ID=cds-WP_014722600.1;Parent=gene-LDO38_RS23760;Dbxref=GenBank:WP_014722600.1;Name=WP_014722600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722600.1;locus_tag=LDO38_RS23760;product=hypothetical protein;protein_id=WP_014722600.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 131780 132124 . - . ID=gene-LDO38_RS23765;Name=LDO38_RS23765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23765;old_locus_tag=BVI2075_640139 NZ_CAJZAL010000168.1 Protein Homology CDS 131780 132124 . - 0 ID=cds-WP_011883612.1;Parent=gene-LDO38_RS23765;Dbxref=GenBank:WP_011883612.1;Name=WP_011883612.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003258412.1;locus_tag=LDO38_RS23765;product=cupin domain-containing protein;protein_id=WP_011883612.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 132445 133527 . - . ID=gene-LDO38_RS23770;Name=LDO38_RS23770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23770;old_locus_tag=BVI2075_640140 NZ_CAJZAL010000168.1 Protein Homology CDS 132445 133527 . - 0 ID=cds-WP_069238985.1;Parent=gene-LDO38_RS23770;Dbxref=GenBank:WP_069238985.1;Name=WP_069238985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883611.1;locus_tag=LDO38_RS23770;product=Imm71 family immunity protein;protein_id=WP_069238985.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 133794 133868 . + . ID=gene-LDO38_RS23775;Name=LDO38_RS23775;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS23775;old_locus_tag=BVI2075_TRNA20 NZ_CAJZAL010000168.1 tRNAscan-SE tRNA 133794 133868 . + . ID=rna-LDO38_RS23775;Parent=gene-LDO38_RS23775;anticodon=(pos:133827..133829);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS23775;product=tRNA-Gly NZ_CAJZAL010000168.1 tRNAscan-SE exon 133794 133868 . + . ID=exon-LDO38_RS23775-1;Parent=rna-LDO38_RS23775;anticodon=(pos:133827..133829);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS23775;product=tRNA-Gly NZ_CAJZAL010000168.1 RefSeq gene 134001 134768 . + . ID=gene-LDO38_RS23780;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=LDO38_RS23780;old_locus_tag=BVI2075_640141 NZ_CAJZAL010000168.1 Protein Homology CDS 134001 134768 . + 0 ID=cds-WP_011883607.1;Parent=gene-LDO38_RS23780;Dbxref=GenBank:WP_011883607.1;Name=WP_011883607.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883607.1;locus_tag=LDO38_RS23780;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_011883607.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 134859 135689 . - . ID=gene-LDO38_RS23785;Name=LDO38_RS23785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23785;old_locus_tag=BVI2075_640142 NZ_CAJZAL010000168.1 Protein Homology CDS 134859 135689 . - 0 ID=cds-WP_011883604.1;Parent=gene-LDO38_RS23785;Dbxref=GenBank:WP_011883604.1;Name=WP_011883604.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488560.1;locus_tag=LDO38_RS23785;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_011883604.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 135768 136349 . - . ID=gene-LDO38_RS23790;Name=LDO38_RS23790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23790;old_locus_tag=BVI2075_640143 NZ_CAJZAL010000168.1 Protein Homology CDS 135768 136349 . - 0 ID=cds-WP_011883603.1;Parent=gene-LDO38_RS23790;Dbxref=GenBank:WP_011883603.1;Name=WP_011883603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400908.1;locus_tag=LDO38_RS23790;product=DUF1439 domain-containing protein;protein_id=WP_011883603.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 136499 136828 . - . ID=gene-LDO38_RS23795;Name=LDO38_RS23795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23795;old_locus_tag=BVI2075_640144 NZ_CAJZAL010000168.1 Protein Homology CDS 136499 136828 . - 0 ID=cds-WP_011883601.1;Parent=gene-LDO38_RS23795;Dbxref=GenBank:WP_011883601.1;Name=WP_011883601.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722593.1;locus_tag=LDO38_RS23795;product=YkgJ family cysteine cluster protein;protein_id=WP_011883601.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 136988 138379 . + . ID=gene-LDO38_RS23800;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=LDO38_RS23800;old_locus_tag=BVI2075_640145 NZ_CAJZAL010000168.1 Protein Homology CDS 136988 138379 . + 0 ID=cds-WP_046425136.1;Parent=gene-LDO38_RS23800;Dbxref=GenBank:WP_046425136.1;Name=WP_046425136.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363257.1;locus_tag=LDO38_RS23800;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_046425136.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 138451 138708 . + . ID=gene-LDO38_RS23805;Name=LDO38_RS23805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23805;old_locus_tag=BVI2075_640146 NZ_CAJZAL010000168.1 Protein Homology CDS 138451 138708 . + 0 ID=cds-WP_034194096.1;Parent=gene-LDO38_RS23805;Dbxref=GenBank:WP_034194096.1;Name=WP_034194096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883598.1;locus_tag=LDO38_RS23805;product=hypothetical protein;protein_id=WP_034194096.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 138813 139469 . + . ID=gene-LDO38_RS23810;Name=LDO38_RS23810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23810;old_locus_tag=BVI2075_640147 NZ_CAJZAL010000168.1 Protein Homology CDS 138813 139469 . + 0 ID=cds-WP_014722591.1;Parent=gene-LDO38_RS23810;Dbxref=GenBank:WP_014722591.1;Name=WP_014722591.1;Ontology_term=GO:0030091,GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein repair|0030091||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332930.1;locus_tag=LDO38_RS23810;product=protein-L-isoaspartate O-methyltransferase family protein;protein_id=WP_014722591.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 139484 139807 . + . ID=gene-LDO38_RS23815;Name=LDO38_RS23815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23815;old_locus_tag=BVI2075_640148 NZ_CAJZAL010000168.1 Protein Homology CDS 139484 139807 . + 0 ID=cds-WP_034194095.1;Parent=gene-LDO38_RS23815;Dbxref=GenBank:WP_034194095.1;Name=WP_034194095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091617.1;locus_tag=LDO38_RS23815;product=rhodanese-like domain-containing protein;protein_id=WP_034194095.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 140199 141506 . + . ID=gene-LDO38_RS23820;Name=urtA;gbkey=Gene;gene=urtA;gene_biotype=protein_coding;locus_tag=LDO38_RS23820;old_locus_tag=BVI2075_640149 NZ_CAJZAL010000168.1 Protein Homology CDS 140199 141506 . + 0 ID=cds-WP_011883592.1;Parent=gene-LDO38_RS23820;Dbxref=GenBank:WP_011883592.1;Name=WP_011883592.1;Ontology_term=GO:0015840,GO:0033219,GO:0033221,GO:0030288,GO:0055052;gbkey=CDS;gene=urtA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=urea binding|0033219||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476693.1;locus_tag=LDO38_RS23820;product=urea ABC transporter substrate-binding protein;protein_id=WP_011883592.1;transl_table=11 NZ_CAJZAL010000168.1 RefSeq gene 141676 143295 . + . ID=gene-LDO38_RS23825;Name=urtB;gbkey=Gene;gene=urtB;gene_biotype=protein_coding;locus_tag=LDO38_RS23825;old_locus_tag=BVI2075_640151 NZ_CAJZAL010000168.1 Protein Homology CDS 141676 143295 . + 0 ID=cds-WP_069246159.1;Parent=gene-LDO38_RS23825;Dbxref=GenBank:WP_069246159.1;Name=WP_069246159.1;Ontology_term=GO:0015840,GO:0033221,GO:0005886,GO:0055052;gbkey=CDS;gene=urtB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488541.1;locus_tag=LDO38_RS23825;product=urea ABC transporter permease subunit UrtB;protein_id=WP_069246159.1;transl_table=11 ##sequence-region NZ_CAJZAL010000169.1 1 2449 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000169.1 RefSeq region 1 2449 . + . ID=NZ_CAJZAL010000169.1:1..2449;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_65 NZ_CAJZAL010000169.1 RefSeq gene 142 1620 . + . ID=gene-LDO38_RS23830;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=LDO38_RS23830;old_locus_tag=BVI2075_650001 NZ_CAJZAL010000169.1 Protein Homology CDS 142 1620 . + 0 ID=cds-WP_418225226.1;Parent=gene-LDO38_RS23830;Dbxref=GenBank:WP_418225226.1;Name=WP_418225226.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885802.1;locus_tag=LDO38_RS23830;product=IS21 family transposase;protein_id=WP_418225226.1;transl_table=11 NZ_CAJZAL010000169.1 RefSeq gene 1613 2410 . + . ID=gene-LDO38_RS23835;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=LDO38_RS23835;old_locus_tag=BVI2075_650002 NZ_CAJZAL010000169.1 Protein Homology CDS 1613 2410 . + 0 ID=cds-WP_011875575.1;Parent=gene-LDO38_RS23835;Dbxref=GenBank:WP_011875575.1;Name=WP_011875575.1;Ontology_term=GO:0005524;gbkey=CDS;gene=istB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700154.1;locus_tag=LDO38_RS23835;product=IS21-like element helper ATPase IstB;protein_id=WP_011875575.1;transl_table=11 ##sequence-region NZ_CAJZAL010000170.1 1 863 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000170.1 RefSeq region 1 863 . + . ID=NZ_CAJZAL010000170.1:1..863;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_66 NZ_CAJZAL010000170.1 RefSeq gene 600 761 . + . ID=gene-LDO38_RS23845;Name=LDO38_RS23845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23845 NZ_CAJZAL010000170.1 Protein Homology CDS 600 761 . + 0 ID=cds-WP_155121959.1;Parent=gene-LDO38_RS23845;Dbxref=GenBank:WP_155121959.1;Name=WP_155121959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004552326.1;locus_tag=LDO38_RS23845;product=BPSL0761 family protein;protein_id=WP_155121959.1;transl_table=11 ##sequence-region NZ_CAJZAL010000171.1 1 49516 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000171.1 RefSeq region 1 49516 . + . ID=NZ_CAJZAL010000171.1:1..49516;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_67 NZ_CAJZAL010000171.1 RefSeq gene 290 1735 . + . ID=gene-LDO38_RS23850;Name=LDO38_RS23850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23850;old_locus_tag=BVI2075_670001 NZ_CAJZAL010000171.1 Protein Homology CDS 290 1735 . + 0 ID=cds-WP_069246415.1;Parent=gene-LDO38_RS23850;Dbxref=GenBank:WP_069246415.1;Name=WP_069246415.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880869.1;locus_tag=LDO38_RS23850;product=MFS transporter;protein_id=WP_069246415.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 1998 3245 . + . ID=gene-LDO38_RS23855;Name=LDO38_RS23855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23855;old_locus_tag=BVI2075_670002 NZ_CAJZAL010000171.1 Protein Homology CDS 1998 3245 . + 0 ID=cds-WP_060092685.1;Parent=gene-LDO38_RS23855;Dbxref=GenBank:WP_060092685.1;Name=WP_060092685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480524.1;locus_tag=LDO38_RS23855;product=hypothetical protein;protein_id=WP_060092685.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 3256 5451 . - . ID=gene-LDO38_RS23860;Name=LDO38_RS23860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23860;old_locus_tag=BVI2075_670003 NZ_CAJZAL010000171.1 Protein Homology CDS 3256 5451 . - 0 ID=cds-WP_069246417.1;Parent=gene-LDO38_RS23860;Dbxref=GenBank:WP_069246417.1;Name=WP_069246417.1;Ontology_term=GO:0006508,GO:0009252,GO:0008658,GO:0008955,GO:0009002;gbkey=CDS;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753731.1;locus_tag=LDO38_RS23860;product=penicillin-binding protein 1A;protein_id=WP_069246417.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 5556 5939 . - . ID=gene-LDO38_RS30640;Name=LDO38_RS30640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30640;old_locus_tag=BVI2075_670004 NZ_CAJZAL010000171.1 GeneMarkS-2+ CDS 5556 5939 . - 0 ID=cds-WP_124260299.1;Parent=gene-LDO38_RS30640;Dbxref=GenBank:WP_124260299.1;Name=WP_124260299.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30640;product=hypothetical protein;protein_id=WP_124260299.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 5981 6619 . + . ID=gene-LDO38_RS23870;Name=LDO38_RS23870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23870;old_locus_tag=BVI2075_670005 NZ_CAJZAL010000171.1 Protein Homology CDS 5981 6619 . + 0 ID=cds-WP_046424481.1;Parent=gene-LDO38_RS23870;Dbxref=GenBank:WP_046424481.1;Name=WP_046424481.1;Ontology_term=GO:0043934,GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;go_process=sporulation|0043934||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546936.1;locus_tag=LDO38_RS23870;product=FMN-binding negative transcriptional regulator;protein_id=WP_046424481.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 6669 7259 . - . ID=gene-LDO38_RS23875;Name=LDO38_RS23875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23875;old_locus_tag=BVI2075_670006 NZ_CAJZAL010000171.1 Protein Homology CDS 6669 7259 . - 0 ID=cds-WP_014724042.1;Parent=gene-LDO38_RS23875;Dbxref=GenBank:WP_014724042.1;Name=WP_014724042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405941.1;locus_tag=LDO38_RS23875;product=thioredoxin family protein;protein_id=WP_014724042.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 7483 8223 . + . ID=gene-LDO38_RS23880;Name=LDO38_RS23880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23880;old_locus_tag=BVI2075_670008 NZ_CAJZAL010000171.1 Protein Homology CDS 7483 8223 . + 0 ID=cds-WP_034194743.1;Parent=gene-LDO38_RS23880;Dbxref=GenBank:WP_034194743.1;Name=WP_034194743.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750896.1;locus_tag=LDO38_RS23880;product=response regulator;protein_id=WP_034194743.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 8220 9551 . + . ID=gene-LDO38_RS23885;Name=LDO38_RS23885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23885;old_locus_tag=BVI2075_670007 NZ_CAJZAL010000171.1 Protein Homology CDS 8220 9551 . + 0 ID=cds-WP_069246418.1;Parent=gene-LDO38_RS23885;Dbxref=GenBank:WP_069246418.1;Name=WP_069246418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480535.1;locus_tag=LDO38_RS23885;product=ATP-binding protein;protein_id=WP_069246418.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 9823 10305 . - . ID=gene-LDO38_RS23890;Name=LDO38_RS23890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23890 NZ_CAJZAL010000171.1 Protein Homology CDS 9823 10305 . - 0 ID=cds-WP_034194741.1;Parent=gene-LDO38_RS23890;Dbxref=GenBank:WP_034194741.1;Name=WP_034194741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018423524.1;locus_tag=LDO38_RS23890;product=cupin domain-containing protein;protein_id=WP_034194741.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 10665 11351 . + . ID=gene-LDO38_RS23895;Name=LDO38_RS23895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23895;old_locus_tag=BVI2075_670011 NZ_CAJZAL010000171.1 GeneMarkS-2+ CDS 10665 11351 . + 0 ID=cds-WP_124259675.1;Parent=gene-LDO38_RS23895;Dbxref=GenBank:WP_124259675.1;Name=WP_124259675.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS23895;product=hypothetical protein;protein_id=WP_124259675.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 11594 12019 . - . ID=gene-LDO38_RS23900;Name=LDO38_RS23900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23900;old_locus_tag=BVI2075_670013 NZ_CAJZAL010000171.1 Protein Homology CDS 11594 12019 . - 0 ID=cds-WP_059475914.1;Parent=gene-LDO38_RS23900;Dbxref=GenBank:WP_059475914.1;Name=WP_059475914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724038.1;locus_tag=LDO38_RS23900;product=cupin domain-containing protein;protein_id=WP_059475914.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 12097 12924 . - . ID=gene-LDO38_RS23905;Name=LDO38_RS23905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23905;old_locus_tag=BVI2075_670014 NZ_CAJZAL010000171.1 Protein Homology CDS 12097 12924 . - 0 ID=cds-WP_014724037.1;Parent=gene-LDO38_RS23905;Dbxref=GenBank:WP_014724037.1;Name=WP_014724037.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724037.1;locus_tag=LDO38_RS23905;product=AraC family transcriptional regulator;protein_id=WP_014724037.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 13114 13941 . - . ID=gene-LDO38_RS23910;Name=LDO38_RS23910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23910;old_locus_tag=BVI2075_670015 NZ_CAJZAL010000171.1 Protein Homology CDS 13114 13941 . - 0 ID=cds-WP_059669177.1;Parent=gene-LDO38_RS23910;Dbxref=GenBank:WP_059669177.1;Name=WP_059669177.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013952702.1;locus_tag=LDO38_RS23910;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_059669177.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 14041 14412 . + . ID=gene-LDO38_RS23915;Name=LDO38_RS23915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23915;old_locus_tag=BVI2075_670016 NZ_CAJZAL010000171.1 Protein Homology CDS 14041 14412 . + 0 ID=cds-WP_034195534.1;Parent=gene-LDO38_RS23915;Dbxref=GenBank:WP_034195534.1;Name=WP_034195534.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724036.1;locus_tag=LDO38_RS23915;product=heavy metal-responsive transcriptional regulator;protein_id=WP_034195534.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 14806 16203 . + . ID=gene-LDO38_RS23920;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=LDO38_RS23920;old_locus_tag=BVI2075_670017 NZ_CAJZAL010000171.1 Protein Homology CDS 14806 16203 . + 0 ID=cds-WP_014724035.1;Parent=gene-LDO38_RS23920;Dbxref=GenBank:WP_014724035.1;Name=WP_014724035.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724035.1;locus_tag=LDO38_RS23920;product=cysteine--tRNA ligase;protein_id=WP_014724035.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 16457 17851 . + . ID=gene-LDO38_RS23925;Name=LDO38_RS23925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23925;old_locus_tag=BVI2075_670019 NZ_CAJZAL010000171.1 Protein Homology CDS 16457 17851 . + 0 ID=cds-WP_196480344.1;Parent=gene-LDO38_RS23925;Dbxref=GenBank:WP_196480344.1;Name=WP_196480344.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF048867.1;locus_tag=LDO38_RS23925;product=Kelch repeat-containing protein;protein_id=WP_196480344.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 18192 18803 . - . ID=gene-LDO38_RS23930;Name=LDO38_RS23930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23930;old_locus_tag=BVI2075_670020 NZ_CAJZAL010000171.1 Protein Homology CDS 18192 18803 . - 0 ID=cds-WP_034195550.1;Parent=gene-LDO38_RS23930;Dbxref=GenBank:WP_034195550.1;Name=WP_034195550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354013.1;locus_tag=LDO38_RS23930;product=alpha/beta fold hydrolase;protein_id=WP_034195550.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 18857 19591 . - . ID=gene-LDO38_RS23935;Name=LDO38_RS23935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23935;old_locus_tag=BVI2075_670021 NZ_CAJZAL010000171.1 Protein Homology CDS 18857 19591 . - 0 ID=cds-WP_034195533.1;Parent=gene-LDO38_RS23935;Dbxref=GenBank:WP_034195533.1;Name=WP_034195533.1;Ontology_term=GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898402.1;locus_tag=LDO38_RS23935;product=metallophosphoesterase family protein;protein_id=WP_034195533.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 19708 20241 . - . ID=gene-LDO38_RS23940;Name=LDO38_RS23940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23940;old_locus_tag=BVI2075_670022 NZ_CAJZAL010000171.1 Protein Homology CDS 19708 20241 . - 0 ID=cds-WP_034195532.1;Parent=gene-LDO38_RS23940;Dbxref=GenBank:WP_034195532.1;Name=WP_034195532.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546941.1;locus_tag=LDO38_RS23940;product=GNAT family N-acetyltransferase;protein_id=WP_034195532.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 20365 20565 . + . ID=gene-LDO38_RS23945;Name=LDO38_RS23945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23945 NZ_CAJZAL010000171.1 GeneMarkS-2+ CDS 20365 20565 . + 0 ID=cds-WP_045577694.1;Parent=gene-LDO38_RS23945;Dbxref=GenBank:WP_045577694.1;Name=WP_045577694.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS23945;product=hypothetical protein;protein_id=WP_045577694.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 20861 22783 . + . ID=gene-LDO38_RS23950;Name=LDO38_RS23950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23950;old_locus_tag=BVI2075_670023 NZ_CAJZAL010000171.1 Protein Homology CDS 20861 22783 . + 0 ID=cds-WP_124259674.1;Parent=gene-LDO38_RS23950;Dbxref=GenBank:WP_124259674.1;Name=WP_124259674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405949.1;locus_tag=LDO38_RS23950;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_124259674.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 22812 25007 . - . ID=gene-LDO38_RS23955;Name=LDO38_RS23955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23955;old_locus_tag=BVI2075_670024 NZ_CAJZAL010000171.1 Protein Homology CDS 22812 25007 . - 0 ID=cds-WP_059896489.1;Parent=gene-LDO38_RS23955;Dbxref=GenBank:WP_059896489.1;Name=WP_059896489.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757858.1;locus_tag=LDO38_RS23955;product=TonB-dependent siderophore receptor;protein_id=WP_059896489.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 25235 26200 . - . ID=gene-LDO38_RS23960;Name=LDO38_RS23960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23960;old_locus_tag=BVI2075_670025 NZ_CAJZAL010000171.1 Protein Homology CDS 25235 26200 . - 0 ID=cds-WP_011880850.1;Parent=gene-LDO38_RS23960;Dbxref=GenBank:WP_011880850.1;Name=WP_011880850.1;Ontology_term=GO:0010181,GO:0016491,GO:0046872,GO:0051537;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495155.1;locus_tag=LDO38_RS23960;product=PDR/VanB family oxidoreductase;protein_id=WP_011880850.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 26197 27276 . - . ID=gene-LDO38_RS23965;Name=LDO38_RS23965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23965;old_locus_tag=BVI2075_670026 NZ_CAJZAL010000171.1 Protein Homology CDS 26197 27276 . - 0 ID=cds-WP_041494232.1;Parent=gene-LDO38_RS23965;Dbxref=GenBank:WP_041494232.1;Name=WP_041494232.1;Ontology_term=GO:0016491,GO:0051537;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480544.1;locus_tag=LDO38_RS23965;product=aromatic ring-hydroxylating dioxygenase subunit alpha;protein_id=WP_041494232.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 27473 27961 . + . ID=gene-LDO38_RS23970;Name=LDO38_RS23970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23970;old_locus_tag=BVI2075_670027 NZ_CAJZAL010000171.1 Protein Homology CDS 27473 27961 . + 0 ID=cds-WP_014724026.1;Parent=gene-LDO38_RS23970;Dbxref=GenBank:WP_014724026.1;Name=WP_014724026.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339432.1;locus_tag=LDO38_RS23970;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_014724026.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 28032 28778 . - . ID=gene-LDO38_RS23975;Name=LDO38_RS23975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23975;old_locus_tag=BVI2075_670028 NZ_CAJZAL010000171.1 Protein Homology CDS 28032 28778 . - 0 ID=cds-WP_011880847.1;Parent=gene-LDO38_RS23975;Dbxref=GenBank:WP_011880847.1;Name=WP_011880847.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880847.1;locus_tag=LDO38_RS23975;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011880847.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 28949 30130 . + . ID=gene-LDO38_RS23980;Name=LDO38_RS23980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23980;old_locus_tag=BVI2075_670029 NZ_CAJZAL010000171.1 Protein Homology CDS 28949 30130 . + 0 ID=cds-WP_014724024.1;Parent=gene-LDO38_RS23980;Dbxref=GenBank:WP_014724024.1;Name=WP_014724024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724024.1;locus_tag=LDO38_RS23980;product=isovaleryl-CoA dehydrogenase;protein_id=WP_014724024.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 30162 31769 . + . ID=gene-LDO38_RS23985;Name=LDO38_RS23985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23985;old_locus_tag=BVI2075_670030 NZ_CAJZAL010000171.1 Protein Homology CDS 30162 31769 . + 0 ID=cds-WP_059695779.1;Parent=gene-LDO38_RS23985;Dbxref=GenBank:WP_059695779.1;Name=WP_059695779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690312.1;locus_tag=LDO38_RS23985;product=carboxyl transferase domain-containing protein;protein_id=WP_059695779.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 31789 32574 . + . ID=gene-LDO38_RS23990;Name=LDO38_RS23990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23990;old_locus_tag=BVI2075_670031 NZ_CAJZAL010000171.1 Protein Homology CDS 31789 32574 . + 0 ID=cds-WP_014724022.1;Parent=gene-LDO38_RS23990;Dbxref=GenBank:WP_014724022.1;Name=WP_014724022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366812.1;locus_tag=LDO38_RS23990;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_014724022.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 32611 34611 . + . ID=gene-LDO38_RS23995;Name=LDO38_RS23995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS23995;old_locus_tag=BVI2075_670032 NZ_CAJZAL010000171.1 Protein Homology CDS 32611 34611 . + 0 ID=cds-WP_224056652.1;Parent=gene-LDO38_RS23995;Dbxref=GenBank:WP_224056652.1;Name=WP_224056652.1;Ontology_term=GO:0004075,GO:0005524,GO:0016421,GO:0046872;gbkey=CDS;go_function=biotin carboxylase activity|0004075||IEA,ATP binding|0005524||IEA,CoA carboxylase activity|0016421||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480550.1;locus_tag=LDO38_RS23995;product=acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha;protein_id=WP_224056652.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 34875 36017 . + . ID=gene-LDO38_RS24000;Name=LDO38_RS24000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24000;old_locus_tag=BVI2075_670033 NZ_CAJZAL010000171.1 Protein Homology CDS 34875 36017 . + 0 ID=cds-WP_011880842.1;Parent=gene-LDO38_RS24000;Dbxref=GenBank:WP_011880842.1;Name=WP_011880842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480553.1;locus_tag=LDO38_RS24000;product=DUF2827 domain-containing protein;protein_id=WP_011880842.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 36759 37562 . + . ID=gene-LDO38_RS24005;Name=LDO38_RS24005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24005;old_locus_tag=BVI2075_670035 NZ_CAJZAL010000171.1 Protein Homology CDS 36759 37562 . + 0 ID=cds-WP_011880841.1;Parent=gene-LDO38_RS24005;Dbxref=GenBank:WP_011880841.1;Name=WP_011880841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366806.1;locus_tag=LDO38_RS24005;product=EAL domain-containing protein;protein_id=WP_011880841.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 37624 38055 . + . ID=gene-LDO38_RS24010;Name=LDO38_RS24010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24010;old_locus_tag=BVI2075_670036 NZ_CAJZAL010000171.1 Protein Homology CDS 37624 38055 . + 0 ID=cds-WP_011880840.1;Parent=gene-LDO38_RS24010;Dbxref=GenBank:WP_011880840.1;Name=WP_011880840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880840.1;locus_tag=LDO38_RS24010;product=hypothetical protein;protein_id=WP_011880840.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 38102 40066 . - . ID=gene-LDO38_RS24015;Name=LDO38_RS24015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24015;old_locus_tag=BVI2075_670037 NZ_CAJZAL010000171.1 Protein Homology CDS 38102 40066 . - 0 ID=cds-WP_224056653.1;Parent=gene-LDO38_RS24015;Dbxref=GenBank:WP_224056653.1;Name=WP_224056653.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880839.1;locus_tag=LDO38_RS24015;product=FkbM family methyltransferase;protein_id=WP_224056653.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 40101 41237 . - . ID=gene-LDO38_RS24020;Name=LDO38_RS24020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24020;old_locus_tag=BVI2075_670038 NZ_CAJZAL010000171.1 Protein Homology CDS 40101 41237 . - 0 ID=cds-WP_011880838.1;Parent=gene-LDO38_RS24020;Dbxref=GenBank:WP_011880838.1;Name=WP_011880838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331303.1;locus_tag=LDO38_RS24020;product=DUF2827 family protein;protein_id=WP_011880838.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 41259 41726 . - . ID=gene-LDO38_RS24025;Name=LDO38_RS24025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24025;old_locus_tag=BVI2075_670039 NZ_CAJZAL010000171.1 Protein Homology CDS 41259 41726 . - 0 ID=cds-WP_011880837.1;Parent=gene-LDO38_RS24025;Dbxref=GenBank:WP_011880837.1;Name=WP_011880837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366804.1;locus_tag=LDO38_RS24025;product=DUF4019 domain-containing protein;protein_id=WP_011880837.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 41752 42906 . - . ID=gene-LDO38_RS24030;Name=LDO38_RS24030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24030;old_locus_tag=BVI2075_670040 NZ_CAJZAL010000171.1 Protein Homology CDS 41752 42906 . - 0 ID=cds-WP_034195520.1;Parent=gene-LDO38_RS24030;Dbxref=GenBank:WP_034195520.1;Name=WP_034195520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898439.1;locus_tag=LDO38_RS24030;product=DUF2827 domain-containing protein;protein_id=WP_034195520.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 42921 44066 . - . ID=gene-LDO38_RS24035;Name=LDO38_RS24035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24035;old_locus_tag=BVI2075_670041 NZ_CAJZAL010000171.1 Protein Homology CDS 42921 44066 . - 0 ID=cds-WP_014724017.1;Parent=gene-LDO38_RS24035;Dbxref=GenBank:WP_014724017.1;Name=WP_014724017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354052.1;locus_tag=LDO38_RS24035;product=DUF2827 domain-containing protein;protein_id=WP_014724017.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 44377 45048 . - . ID=gene-LDO38_RS24040;Name=LDO38_RS24040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24040;old_locus_tag=BVI2075_670042 NZ_CAJZAL010000171.1 Protein Homology CDS 44377 45048 . - 0 ID=cds-WP_059669168.1;Parent=gene-LDO38_RS24040;Dbxref=GenBank:WP_059669168.1;Name=WP_059669168.1;Ontology_term=GO:0015288,GO:0042834,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405964.1;locus_tag=LDO38_RS24040;product=OmpA family protein;protein_id=WP_059669168.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 45143 48838 . - . ID=gene-LDO38_RS24045;Name=LDO38_RS24045;end_range=48838,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24045;partial=true NZ_CAJZAL010000171.1 Protein Homology CDS 45143 48838 . - 0 ID=cds-WP_435520981.1;Parent=gene-LDO38_RS24045;Dbxref=GenBank:WP_435520981.1;Name=WP_435520981.1;Ontology_term=GO:0007155,GO:0015031;end_range=48838,.;gbkey=CDS;go_process=cell adhesion|0007155||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493550.1;locus_tag=LDO38_RS24045;partial=true;product=YadA family autotransporter adhesin;protein_id=WP_435520981.1;transl_table=11 NZ_CAJZAL010000171.1 RefSeq gene 49029 49516 . + . ID=gene-LDO38_RS30645;Name=LDO38_RS30645;end_range=49516,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30645;partial=true;start_range=.,49029 NZ_CAJZAL010000171.1 GeneMarkS-2+ CDS 49029 49516 . + 0 ID=cds-WP_435520980.1;Parent=gene-LDO38_RS30645;Dbxref=GenBank:WP_435520980.1;Name=WP_435520980.1;end_range=49516,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30645;partial=true;product=hypothetical protein;protein_id=WP_435520980.1;start_range=.,49029;transl_table=11 ##sequence-region NZ_CAJZAL010000172.1 1 8785 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000172.1 RefSeq region 1 8785 . + . ID=NZ_CAJZAL010000172.1:1..8785;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_68 NZ_CAJZAL010000172.1 RefSeq gene 1 332 . + . ID=gene-LDO38_RS24050;Name=LDO38_RS24050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24050;old_locus_tag=BVI2075_680001;partial=true;start_range=.,1 NZ_CAJZAL010000172.1 Protein Homology CDS 1 332 . + 2 ID=cds-WP_224056655.1;Parent=gene-LDO38_RS24050;Dbxref=GenBank:WP_224056655.1;Name=WP_224056655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192694.1;locus_tag=LDO38_RS24050;partial=true;product=substrate-binding domain-containing protein;protein_id=WP_224056655.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000172.1 RefSeq gene 386 1174 . + . ID=gene-LDO38_RS24055;Name=LDO38_RS24055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24055;old_locus_tag=BVI2075_680002 NZ_CAJZAL010000172.1 Protein Homology CDS 386 1174 . + 0 ID=cds-WP_059461758.1;Parent=gene-LDO38_RS24055;Dbxref=GenBank:WP_059461758.1;Name=WP_059461758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491183.1;locus_tag=LDO38_RS24055;product=YhfC family intramembrane metalloprotease;protein_id=WP_059461758.1;transl_table=11 NZ_CAJZAL010000172.1 RefSeq gene 1188 1550 . + . ID=gene-LDO38_RS24060;Name=LDO38_RS24060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24060;old_locus_tag=BVI2075_680003 NZ_CAJZAL010000172.1 Protein Homology CDS 1188 1550 . + 0 ID=cds-WP_011884902.1;Parent=gene-LDO38_RS24060;Dbxref=GenBank:WP_011884902.1;Name=WP_011884902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884902.1;locus_tag=LDO38_RS24060;product=DUF3022 domain-containing protein;protein_id=WP_011884902.1;transl_table=11 NZ_CAJZAL010000172.1 RefSeq gene 1602 2033 . - . ID=gene-LDO38_RS24065;Name=LDO38_RS24065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24065;old_locus_tag=BVI2075_680004 NZ_CAJZAL010000172.1 Protein Homology CDS 1602 2033 . - 0 ID=cds-WP_034193149.1;Parent=gene-LDO38_RS24065;Dbxref=GenBank:WP_034193149.1;Name=WP_034193149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896979.1;locus_tag=LDO38_RS24065;product=PGDYG domain-containing protein;protein_id=WP_034193149.1;transl_table=11 NZ_CAJZAL010000172.1 RefSeq gene 2126 2656 . - . ID=gene-LDO38_RS24070;Name=LDO38_RS24070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24070;old_locus_tag=BVI2075_680005 NZ_CAJZAL010000172.1 Protein Homology CDS 2126 2656 . - 0 ID=cds-WP_011884900.1;Parent=gene-LDO38_RS24070;Dbxref=GenBank:WP_011884900.1;Name=WP_011884900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400019.1;locus_tag=LDO38_RS24070;product=Spy/CpxP family protein refolding chaperone;protein_id=WP_011884900.1;transl_table=11 NZ_CAJZAL010000172.1 RefSeq gene 3006 3470 . + . ID=gene-LDO38_RS24075;Name=LDO38_RS24075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24075;old_locus_tag=BVI2075_680006 NZ_CAJZAL010000172.1 Protein Homology CDS 3006 3470 . + 0 ID=cds-WP_011884899.1;Parent=gene-LDO38_RS24075;Dbxref=GenBank:WP_011884899.1;Name=WP_011884899.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656928.1;locus_tag=LDO38_RS24075;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011884899.1;transl_table=11 NZ_CAJZAL010000172.1 RefSeq gene 4200 5300 . + . ID=gene-LDO38_RS24080;Name=LDO38_RS24080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24080;old_locus_tag=BVI2075_680009 NZ_CAJZAL010000172.1 Protein Homology CDS 4200 5300 . + 0 ID=cds-WP_011884898.1;Parent=gene-LDO38_RS24080;Dbxref=GenBank:WP_011884898.1;Name=WP_011884898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192972.1;locus_tag=LDO38_RS24080;product=saccharopine dehydrogenase family protein;protein_id=WP_011884898.1;transl_table=11 NZ_CAJZAL010000172.1 RefSeq gene 5416 6033 . - . ID=gene-LDO38_RS24090;Name=LDO38_RS24090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24090;old_locus_tag=BVI2075_680010 NZ_CAJZAL010000172.1 Protein Homology CDS 5416 6033 . - 0 ID=cds-WP_011884897.1;Parent=gene-LDO38_RS24090;Dbxref=GenBank:WP_011884897.1;Name=WP_011884897.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884897.1;locus_tag=LDO38_RS24090;product=AAA family ATPase;protein_id=WP_011884897.1;transl_table=11 NZ_CAJZAL010000172.1 RefSeq gene 6030 6176 . - . ID=gene-LDO38_RS24095;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=LDO38_RS24095;old_locus_tag=BVI2075_680011 NZ_CAJZAL010000172.1 Protein Homology CDS 6030 6176 . - 0 ID=cds-WP_014723062.1;Parent=gene-LDO38_RS24095;Dbxref=GenBank:WP_014723062.1;Name=WP_014723062.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755040.1;locus_tag=LDO38_RS24095;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_014723062.1;transl_table=11 NZ_CAJZAL010000172.1 RefSeq gene 6358 7335 . + . ID=gene-LDO38_RS24100;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=LDO38_RS24100;old_locus_tag=BVI2075_680012 NZ_CAJZAL010000172.1 Protein Homology CDS 6358 7335 . + 0 ID=cds-WP_011884896.1;Parent=gene-LDO38_RS24100;Dbxref=GenBank:WP_011884896.1;Name=WP_011884896.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909327.1;locus_tag=LDO38_RS24100;product=magnesium/cobalt transporter CorA;protein_id=WP_011884896.1;transl_table=11 NZ_CAJZAL010000172.1 RefSeq gene 7344 7631 . - . ID=gene-LDO38_RS24105;Name=LDO38_RS24105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24105;old_locus_tag=BVI2075_680013 NZ_CAJZAL010000172.1 Protein Homology CDS 7344 7631 . - 0 ID=cds-WP_011884895.1;Parent=gene-LDO38_RS24105;Dbxref=GenBank:WP_011884895.1;Name=WP_011884895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884895.1;locus_tag=LDO38_RS24105;product=YciI-like protein;protein_id=WP_011884895.1;transl_table=11 NZ_CAJZAL010000172.1 RefSeq gene 8091 8579 . + . ID=gene-LDO38_RS24110;Name=LDO38_RS24110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24110;old_locus_tag=BVI2075_680015 NZ_CAJZAL010000172.1 Protein Homology CDS 8091 8579 . + 0 ID=cds-WP_011884894.1;Parent=gene-LDO38_RS24110;Dbxref=GenBank:WP_011884894.1;Name=WP_011884894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764287.1;locus_tag=LDO38_RS24110;product=aminoacyl-tRNA deacylase;protein_id=WP_011884894.1;transl_table=11 ##sequence-region NZ_CAJZAL010000173.1 1 25347 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000173.1 RefSeq region 1 25347 . + . ID=NZ_CAJZAL010000173.1:1..25347;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_69 NZ_CAJZAL010000173.1 RefSeq gene 53 242 . - . ID=gene-LDO38_RS30650;Name=LDO38_RS30650;end_range=242,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30650;partial=true NZ_CAJZAL010000173.1 GeneMarkS-2+ CDS 53 242 . - 1 ID=cds-WP_435520982.1;Parent=gene-LDO38_RS30650;Dbxref=GenBank:WP_435520982.1;Name=WP_435520982.1;end_range=242,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30650;partial=true;product=hypothetical protein;protein_id=WP_435520982.1;transl_table=11 NZ_CAJZAL010000173.1 RefSeq gene 253 1847 . + . ID=gene-LDO38_RS24115;Name=LDO38_RS24115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24115;old_locus_tag=BVI2075_690001;partial=true;start_range=.,253 NZ_CAJZAL010000173.1 Protein Homology CDS 253 1847 . + 2 ID=cds-WP_435520983.1;Parent=gene-LDO38_RS24115;Dbxref=GenBank:WP_435520983.1;Name=WP_435520983.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884757.1;locus_tag=LDO38_RS24115;partial=true;product=methyl-accepting chemotaxis protein;protein_id=WP_435520983.1;start_range=.,253;transl_table=11 NZ_CAJZAL010000173.1 RefSeq gene 2377 4299 . + . ID=gene-LDO38_RS24120;Name=LDO38_RS24120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24120;old_locus_tag=BVI2075_690002 NZ_CAJZAL010000173.1 Protein Homology CDS 2377 4299 . + 0 ID=cds-WP_011884759.1;Parent=gene-LDO38_RS24120;Dbxref=GenBank:WP_011884759.1;Name=WP_011884759.1;Ontology_term=GO:0004672;gbkey=CDS;go_function=protein kinase activity|0004672||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020165153.1;locus_tag=LDO38_RS24120;product=PrkA family serine protein kinase;protein_id=WP_011884759.1;transl_table=11 NZ_CAJZAL010000173.1 RefSeq gene 4425 5693 . + . ID=gene-LDO38_RS24125;Name=LDO38_RS24125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24125;old_locus_tag=BVI2075_690003 NZ_CAJZAL010000173.1 Protein Homology CDS 4425 5693 . + 0 ID=cds-WP_011884761.1;Parent=gene-LDO38_RS24125;Dbxref=GenBank:WP_011884761.1;Name=WP_011884761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332328.1;locus_tag=LDO38_RS24125;product=YeaH/YhbH family protein;protein_id=WP_011884761.1;transl_table=11 NZ_CAJZAL010000173.1 RefSeq gene 5690 7369 . + . ID=gene-LDO38_RS24130;Name=LDO38_RS24130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24130;old_locus_tag=BVI2075_690004 NZ_CAJZAL010000173.1 Protein Homology CDS 5690 7369 . + 0 ID=cds-WP_014722998.1;Parent=gene-LDO38_RS24130;Dbxref=GenBank:WP_014722998.1;Name=WP_014722998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694280.1;locus_tag=LDO38_RS24130;product=SpoVR family protein;protein_id=WP_014722998.1;transl_table=11 NZ_CAJZAL010000173.1 RefSeq gene 7617 8921 . + . ID=gene-LDO38_RS24135;Name=LDO38_RS24135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24135;old_locus_tag=BVI2075_690005 NZ_CAJZAL010000173.1 Protein Homology CDS 7617 8921 . + 0 ID=cds-WP_011884766.1;Parent=gene-LDO38_RS24135;Dbxref=GenBank:WP_011884766.1;Name=WP_011884766.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754308.1;locus_tag=LDO38_RS24135;product=MFS family transporter;protein_id=WP_011884766.1;transl_table=11 NZ_CAJZAL010000173.1 RefSeq gene 9276 11207 . + . ID=gene-LDO38_RS24140;Name=LDO38_RS24140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24140;old_locus_tag=BVI2075_690006 NZ_CAJZAL010000173.1 Protein Homology CDS 9276 11207 . + 0 ID=cds-WP_124259880.1;Parent=gene-LDO38_RS24140;Dbxref=GenBank:WP_124259880.1;Name=WP_124259880.1;Ontology_term=GO:0004252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884768.1;locus_tag=LDO38_RS24140;product=rhomboid family intramembrane serine protease;protein_id=WP_124259880.1;transl_table=11 NZ_CAJZAL010000173.1 RefSeq gene 11382 12197 . + . ID=gene-LDO38_RS24145;Name=LDO38_RS24145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24145;old_locus_tag=BVI2075_690007 NZ_CAJZAL010000173.1 Protein Homology CDS 11382 12197 . + 0 ID=cds-WP_034193107.1;Parent=gene-LDO38_RS24145;Dbxref=GenBank:WP_034193107.1;Name=WP_034193107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483955.1;locus_tag=LDO38_RS24145;product=ABC transporter substrate-binding protein;protein_id=WP_034193107.1;transl_table=11 NZ_CAJZAL010000173.1 RefSeq gene 12320 13042 . + . ID=gene-LDO38_RS24150;Name=LDO38_RS24150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24150;old_locus_tag=BVI2075_690008 NZ_CAJZAL010000173.1 Protein Homology CDS 12320 13042 . + 0 ID=cds-WP_014723001.1;Parent=gene-LDO38_RS24150;Dbxref=GenBank:WP_014723001.1;Name=WP_014723001.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351917.1;locus_tag=LDO38_RS24150;product=amino acid ABC transporter permease;protein_id=WP_014723001.1;transl_table=11 NZ_CAJZAL010000173.1 RefSeq gene 13045 13770 . + . ID=gene-LDO38_RS24155;Name=LDO38_RS24155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24155;old_locus_tag=BVI2075_690009 NZ_CAJZAL010000173.1 Protein Homology CDS 13045 13770 . + 0 ID=cds-WP_011884774.1;Parent=gene-LDO38_RS24155;Dbxref=GenBank:WP_011884774.1;Name=WP_011884774.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545358.1;locus_tag=LDO38_RS24155;product=amino acid ABC transporter permease;protein_id=WP_011884774.1;transl_table=11 NZ_CAJZAL010000173.1 RefSeq gene 13989 15257 . - . ID=gene-LDO38_RS24160;Name=LDO38_RS24160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24160;old_locus_tag=BVI2075_690010 NZ_CAJZAL010000173.1 Protein Homology CDS 13989 15257 . - 0 ID=cds-WP_059562722.1;Parent=gene-LDO38_RS24160;Dbxref=GenBank:WP_059562722.1;Name=WP_059562722.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656807.1;locus_tag=LDO38_RS24160;product=M23 family metallopeptidase;protein_id=WP_059562722.1;transl_table=11 NZ_CAJZAL010000173.1 RefSeq gene 15566 16231 . - . ID=gene-LDO38_RS24165;Name=LDO38_RS24165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24165;old_locus_tag=BVI2075_690011 NZ_CAJZAL010000173.1 Protein Homology CDS 15566 16231 . - 0 ID=cds-WP_060043856.1;Parent=gene-LDO38_RS24165;Dbxref=GenBank:WP_060043856.1;Name=WP_060043856.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213378.1;locus_tag=LDO38_RS24165;product=TetR family transcriptional regulator;protein_id=WP_060043856.1;transl_table=11 NZ_CAJZAL010000173.1 RefSeq gene 16383 17570 . + . ID=gene-LDO38_RS24170;Name=LDO38_RS24170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24170;old_locus_tag=BVI2075_690013 NZ_CAJZAL010000173.1 Protein Homology CDS 16383 17570 . + 0 ID=cds-WP_014723004.1;Parent=gene-LDO38_RS24170;Dbxref=GenBank:WP_014723004.1;Name=WP_014723004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897085.1;locus_tag=LDO38_RS24170;product=MexX/AxyX family multidrug efflux RND transporter periplasmic adaptor subunit;protein_id=WP_014723004.1;transl_table=11 NZ_CAJZAL010000173.1 RefSeq gene 17585 20722 . + . ID=gene-LDO38_RS24175;Name=LDO38_RS24175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24175;old_locus_tag=BVI2075_690014 NZ_CAJZAL010000173.1 Protein Homology CDS 17585 20722 . + 0 ID=cds-WP_060092371.1;Parent=gene-LDO38_RS24175;Dbxref=GenBank:WP_060092371.1;Name=WP_060092371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723005.1;locus_tag=LDO38_RS24175;product=multidrug efflux RND transporter permease subunit;protein_id=WP_060092371.1;transl_table=11 NZ_CAJZAL010000173.1 RefSeq gene 20722 22179 . + . ID=gene-LDO38_RS24180;Name=LDO38_RS24180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24180;old_locus_tag=BVI2075_690015 NZ_CAJZAL010000173.1 Protein Homology CDS 20722 22179 . + 0 ID=cds-WP_124259881.1;Parent=gene-LDO38_RS24180;Dbxref=GenBank:WP_124259881.1;Name=WP_124259881.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363843.1;locus_tag=LDO38_RS24180;product=efflux transporter outer membrane subunit;protein_id=WP_124259881.1;transl_table=11 NZ_CAJZAL010000173.1 RefSeq gene 22339 23004 . + . ID=gene-LDO38_RS24185;Name=LDO38_RS24185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24185;old_locus_tag=BVI2075_690016 NZ_CAJZAL010000173.1 Protein Homology CDS 22339 23004 . + 0 ID=cds-WP_011884789.1;Parent=gene-LDO38_RS24185;Dbxref=GenBank:WP_011884789.1;Name=WP_011884789.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476053.1;locus_tag=LDO38_RS24185;product=RNA polymerase factor sigma-70;protein_id=WP_011884789.1;transl_table=11 NZ_CAJZAL010000173.1 RefSeq gene 23099 23341 . + . ID=gene-LDO38_RS24190;Name=LDO38_RS24190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24190;old_locus_tag=BVI2075_690017 NZ_CAJZAL010000173.1 Protein Homology CDS 23099 23341 . + 0 ID=cds-WP_011884790.1;Parent=gene-LDO38_RS24190;Dbxref=GenBank:WP_011884790.1;Name=WP_011884790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363848.1;locus_tag=LDO38_RS24190;product=MbtH family protein;protein_id=WP_011884790.1;transl_table=11 NZ_CAJZAL010000173.1 RefSeq gene 23385 24404 . + . ID=gene-LDO38_RS24195;Name=LDO38_RS24195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24195;old_locus_tag=BVI2075_690018 NZ_CAJZAL010000173.1 Protein Homology CDS 23385 24404 . + 0 ID=cds-WP_124259882.1;Parent=gene-LDO38_RS24195;Dbxref=GenBank:WP_124259882.1;Name=WP_124259882.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656819.1;locus_tag=LDO38_RS24195;product=TauD/TfdA family dioxygenase;protein_id=WP_124259882.1;transl_table=11 NZ_CAJZAL010000173.1 RefSeq gene 24394 25245 . + . ID=gene-LDO38_RS24200;Name=LDO38_RS24200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24200;old_locus_tag=BVI2075_690019 NZ_CAJZAL010000173.1 Protein Homology CDS 24394 25245 . + 0 ID=cds-WP_014723008.1;Parent=gene-LDO38_RS24200;Dbxref=GenBank:WP_014723008.1;Name=WP_014723008.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486076.1;locus_tag=LDO38_RS24200;product=ABC transporter ATP-binding protein;protein_id=WP_014723008.1;transl_table=11 ##sequence-region NZ_CAJZAL010000174.1 1 100668 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000174.1 RefSeq region 1 100668 . + . ID=NZ_CAJZAL010000174.1:1..100668;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_7 NZ_CAJZAL010000174.1 RefSeq gene 197 718 . - . ID=gene-LDO38_RS24205;Name=LDO38_RS24205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24205;old_locus_tag=BVI2075_70002;partial=true;start_range=.,197 NZ_CAJZAL010000174.1 Protein Homology CDS 197 718 . - 0 ID=cds-WP_435520984.1;Parent=gene-LDO38_RS24205;Dbxref=GenBank:WP_435520984.1;Name=WP_435520984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760142.1;locus_tag=LDO38_RS24205;partial=true;product=YbfB/YjiJ family MFS transporter;protein_id=WP_435520984.1;start_range=.,197;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 1232 1354 . + . ID=gene-LDO38_RS30115;Name=LDO38_RS30115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30115;old_locus_tag=BVI2075_70003 NZ_CAJZAL010000174.1 Protein Homology CDS 1232 1354 . + 0 ID=cds-WP_006479692.1;Parent=gene-LDO38_RS30115;Dbxref=GenBank:WP_006479692.1;Name=WP_006479692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330456.1;locus_tag=LDO38_RS30115;product=hypothetical protein;protein_id=WP_006479692.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 1413 2366 . + . ID=gene-LDO38_RS24210;Name=LDO38_RS24210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24210;old_locus_tag=BVI2075_70004 NZ_CAJZAL010000174.1 Protein Homology CDS 1413 2366 . + 0 ID=cds-WP_059475646.1;Parent=gene-LDO38_RS24210;Dbxref=GenBank:WP_059475646.1;Name=WP_059475646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603841.1;locus_tag=LDO38_RS24210;product=hypothetical protein;protein_id=WP_059475646.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 2374 2883 . - . ID=gene-LDO38_RS24215;Name=LDO38_RS24215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24215;old_locus_tag=BVI2075_70005 NZ_CAJZAL010000174.1 Protein Homology CDS 2374 2883 . - 0 ID=cds-WP_014724489.1;Parent=gene-LDO38_RS24215;Dbxref=GenBank:WP_014724489.1;Name=WP_014724489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660260.1;locus_tag=LDO38_RS24215;product=GNAT family N-acetyltransferase;protein_id=WP_014724489.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 2928 4946 . - . ID=gene-LDO38_RS24220;Name=LDO38_RS24220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24220;old_locus_tag=BVI2075_70006 NZ_CAJZAL010000174.1 Protein Homology CDS 2928 4946 . - 0 ID=cds-WP_046425927.1;Parent=gene-LDO38_RS24220;Dbxref=GenBank:WP_046425927.1;Name=WP_046425927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881400.1;locus_tag=LDO38_RS24220;product=LssY C-terminal domain-containing protein;protein_id=WP_046425927.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 5043 5495 . - . ID=gene-LDO38_RS24225;Name=LDO38_RS24225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24225;old_locus_tag=BVI2075_70007 NZ_CAJZAL010000174.1 Protein Homology CDS 5043 5495 . - 0 ID=cds-WP_043292355.1;Parent=gene-LDO38_RS24225;Dbxref=GenBank:WP_043292355.1;Name=WP_043292355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755806.1;locus_tag=LDO38_RS24225;product=hypothetical protein;protein_id=WP_043292355.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 5786 6433 . + . ID=gene-LDO38_RS24230;Name=LDO38_RS24230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24230;old_locus_tag=BVI2075_70008 NZ_CAJZAL010000174.1 Protein Homology CDS 5786 6433 . + 0 ID=cds-WP_041494073.1;Parent=gene-LDO38_RS24230;Dbxref=GenBank:WP_041494073.1;Name=WP_041494073.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694631.1;locus_tag=LDO38_RS24230;product=response regulator;protein_id=WP_041494073.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 6430 8229 . + . ID=gene-LDO38_RS24235;Name=LDO38_RS24235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24235;old_locus_tag=BVI2075_70009 NZ_CAJZAL010000174.1 Protein Homology CDS 6430 8229 . + 0 ID=cds-WP_069246561.1;Parent=gene-LDO38_RS24235;Dbxref=GenBank:WP_069246561.1;Name=WP_069246561.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724484.1;locus_tag=LDO38_RS24235;product=sensor histidine kinase;protein_id=WP_069246561.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 8267 9577 . - . ID=gene-LDO38_RS24240;Name=LDO38_RS24240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24240;old_locus_tag=BVI2075_70010 NZ_CAJZAL010000174.1 Protein Homology CDS 8267 9577 . - 0 ID=cds-WP_014724483.1;Parent=gene-LDO38_RS24240;Dbxref=GenBank:WP_014724483.1;Name=WP_014724483.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338670.1;locus_tag=LDO38_RS24240;product=MFS transporter;protein_id=WP_014724483.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 9667 10695 . - . ID=gene-LDO38_RS24245;Name=LDO38_RS24245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24245;old_locus_tag=BVI2075_70011 NZ_CAJZAL010000174.1 Protein Homology CDS 9667 10695 . - 0 ID=cds-WP_059696506.1;Parent=gene-LDO38_RS24245;Dbxref=GenBank:WP_059696506.1;Name=WP_059696506.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404369.1;locus_tag=LDO38_RS24245;product=ABC transporter substrate-binding protein;protein_id=WP_059696506.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 10930 11595 . + . ID=gene-LDO38_RS24250;Name=LDO38_RS24250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24250;old_locus_tag=BVI2075_70013 NZ_CAJZAL010000174.1 Protein Homology CDS 10930 11595 . + 0 ID=cds-WP_011881394.1;Parent=gene-LDO38_RS24250;Dbxref=GenBank:WP_011881394.1;Name=WP_011881394.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338672.1;locus_tag=LDO38_RS24250;product=response regulator transcription factor;protein_id=WP_011881394.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 11582 13000 . + . ID=gene-LDO38_RS24255;Name=LDO38_RS24255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24255;old_locus_tag=BVI2075_70014 NZ_CAJZAL010000174.1 Protein Homology CDS 11582 13000 . + 0 ID=cds-WP_011881393.1;Parent=gene-LDO38_RS24255;Dbxref=GenBank:WP_011881393.1;Name=WP_011881393.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881393.1;locus_tag=LDO38_RS24255;product=sensor histidine kinase;protein_id=WP_011881393.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 13022 13753 . - . ID=gene-LDO38_RS24260;Name=LDO38_RS24260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24260;old_locus_tag=BVI2075_70015 NZ_CAJZAL010000174.1 Protein Homology CDS 13022 13753 . - 0 ID=cds-WP_185499741.1;Parent=gene-LDO38_RS24260;Dbxref=GenBank:WP_185499741.1;Name=WP_185499741.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881392.1;locus_tag=LDO38_RS24260;product=ABC transporter ATP-binding protein;protein_id=WP_185499741.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 13783 14622 . - . ID=gene-LDO38_RS24265;Name=LDO38_RS24265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24265;old_locus_tag=BVI2075_70016 NZ_CAJZAL010000174.1 Protein Homology CDS 13783 14622 . - 0 ID=cds-WP_011881391.1;Parent=gene-LDO38_RS24265;Dbxref=GenBank:WP_011881391.1;Name=WP_011881391.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724480.1;locus_tag=LDO38_RS24265;product=ABC transporter ATP-binding protein;protein_id=WP_011881391.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 14634 16445 . - . ID=gene-LDO38_RS24270;Name=LDO38_RS24270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24270;old_locus_tag=BVI2075_70017 NZ_CAJZAL010000174.1 Protein Homology CDS 14634 16445 . - 0 ID=cds-WP_069239942.1;Parent=gene-LDO38_RS24270;Dbxref=GenBank:WP_069239942.1;Name=WP_069239942.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356127.1;locus_tag=LDO38_RS24270;product=ABC transporter permease;protein_id=WP_069239942.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 16491 17684 . - . ID=gene-LDO38_RS24275;Name=LDO38_RS24275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24275;old_locus_tag=BVI2075_70019 NZ_CAJZAL010000174.1 Protein Homology CDS 16491 17684 . - 0 ID=cds-WP_011881389.1;Parent=gene-LDO38_RS24275;Dbxref=GenBank:WP_011881389.1;Name=WP_011881389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416569.1;locus_tag=LDO38_RS24275;product=ABC transporter substrate-binding protein;protein_id=WP_011881389.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 18040 19080 . + . ID=gene-LDO38_RS24280;Name=LDO38_RS24280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24280;old_locus_tag=BVI2075_70020 NZ_CAJZAL010000174.1 Protein Homology CDS 18040 19080 . + 0 ID=cds-WP_069239941.1;Parent=gene-LDO38_RS24280;Dbxref=GenBank:WP_069239941.1;Name=WP_069239941.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495671.1;locus_tag=LDO38_RS24280;product=LysR family transcriptional regulator;protein_id=WP_069239941.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 19077 20561 . + . ID=gene-LDO38_RS24285;Name=LDO38_RS24285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24285;old_locus_tag=BVI2075_70021 NZ_CAJZAL010000174.1 Protein Homology CDS 19077 20561 . + 0 ID=cds-WP_059567593.1;Parent=gene-LDO38_RS24285;Dbxref=GenBank:WP_059567593.1;Name=WP_059567593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881387.1;locus_tag=LDO38_RS24285;product=NAD(P)-binding domain-containing protein;protein_id=WP_059567593.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 20554 21084 . + . ID=gene-LDO38_RS24290;Name=LDO38_RS24290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24290;old_locus_tag=BVI2075_70022 NZ_CAJZAL010000174.1 Protein Homology CDS 20554 21084 . + 0 ID=cds-WP_011881386.1;Parent=gene-LDO38_RS24290;Dbxref=GenBank:WP_011881386.1;Name=WP_011881386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881386.1;locus_tag=LDO38_RS24290;product=CMD domain-containing protein;protein_id=WP_011881386.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 21081 21677 . + . ID=gene-LDO38_RS24295;Name=LDO38_RS24295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24295;old_locus_tag=BVI2075_70023 NZ_CAJZAL010000174.1 Protein Homology CDS 21081 21677 . + 0 ID=cds-WP_014724477.1;Parent=gene-LDO38_RS24295;Dbxref=GenBank:WP_014724477.1;Name=WP_014724477.1;Note=This protein belongs to a clade of uncharacterized proteins related to peroxidases such as the alkylhydroperoxidase AhpD.;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724477.1;locus_tag=LDO38_RS24295;product=peroxidase-related enzyme;protein_id=WP_014724477.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 21732 24470 . - . ID=gene-LDO38_RS24300;Name=LDO38_RS24300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24300;old_locus_tag=BVI2075_70024 NZ_CAJZAL010000174.1 Protein Homology CDS 21732 24470 . - 0 ID=cds-WP_060042960.1;Parent=gene-LDO38_RS24300;Dbxref=GenBank:WP_060042960.1;Name=WP_060042960.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881384.1;locus_tag=LDO38_RS24300;product=Hsp70 family protein;protein_id=WP_060042960.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 24476 26317 . - . ID=gene-LDO38_RS24305;Name=LDO38_RS24305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24305;old_locus_tag=BVI2075_70025 NZ_CAJZAL010000174.1 Protein Homology CDS 24476 26317 . - 0 ID=cds-WP_224056656.1;Parent=gene-LDO38_RS24305;Dbxref=GenBank:WP_224056656.1;Name=WP_224056656.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694612.1;locus_tag=LDO38_RS24305;product=Hsp70 family protein;protein_id=WP_224056656.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 26314 26916 . - . ID=gene-LDO38_RS24310;Name=LDO38_RS24310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24310;old_locus_tag=BVI2075_70026 NZ_CAJZAL010000174.1 Protein Homology CDS 26314 26916 . - 0 ID=cds-WP_059567535.1;Parent=gene-LDO38_RS24310;Dbxref=GenBank:WP_059567535.1;Name=WP_059567535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493132.1;locus_tag=LDO38_RS24310;product=DUF2760 domain-containing protein;protein_id=WP_059567535.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 27812 28159 . - . ID=gene-LDO38_RS24315;Name=LDO38_RS24315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24315;old_locus_tag=BVI2075_70028 NZ_CAJZAL010000174.1 Protein Homology CDS 27812 28159 . - 0 ID=cds-WP_011881381.1;Parent=gene-LDO38_RS24315;Dbxref=GenBank:WP_011881381.1;Name=WP_011881381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881381.1;locus_tag=LDO38_RS24315;product=DUF4148 domain-containing protein;protein_id=WP_011881381.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 28386 29330 . + . ID=gene-LDO38_RS24320;Name=LDO38_RS24320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24320;old_locus_tag=BVI2075_70029 NZ_CAJZAL010000174.1 Protein Homology CDS 28386 29330 . + 0 ID=cds-WP_014724475.1;Parent=gene-LDO38_RS24320;Dbxref=GenBank:WP_014724475.1;Name=WP_014724475.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724475.1;locus_tag=LDO38_RS24320;product=LysR family transcriptional regulator;protein_id=WP_014724475.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 29424 30554 . + . ID=gene-LDO38_RS24325;Name=LDO38_RS24325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24325;old_locus_tag=BVI2075_70030 NZ_CAJZAL010000174.1 Protein Homology CDS 29424 30554 . + 0 ID=cds-WP_011881379.1;Parent=gene-LDO38_RS24325;Dbxref=GenBank:WP_011881379.1;Name=WP_011881379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758270.1;locus_tag=LDO38_RS24325;product=DSD1 family PLP-dependent enzyme;protein_id=WP_011881379.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 30666 31637 . + . ID=gene-LDO38_RS24330;Name=LDO38_RS24330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24330;old_locus_tag=BVI2075_70032 NZ_CAJZAL010000174.1 Protein Homology CDS 30666 31637 . + 0 ID=cds-WP_069246562.1;Parent=gene-LDO38_RS24330;Dbxref=GenBank:WP_069246562.1;Name=WP_069246562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694606.1;locus_tag=LDO38_RS24330;product=ornithine cyclodeaminase family protein;protein_id=WP_069246562.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 31901 32518 . - . ID=gene-LDO38_RS24335;Name=LDO38_RS24335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24335;old_locus_tag=BVI2075_70033 NZ_CAJZAL010000174.1 Protein Homology CDS 31901 32518 . - 0 ID=cds-WP_011881377.1;Parent=gene-LDO38_RS24335;Dbxref=GenBank:WP_011881377.1;Name=WP_011881377.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900310.1;locus_tag=LDO38_RS24335;product=glutathione S-transferase family protein;protein_id=WP_011881377.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 32613 32981 . - . ID=gene-LDO38_RS24340;Name=LDO38_RS24340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24340;old_locus_tag=BVI2075_70034 NZ_CAJZAL010000174.1 Protein Homology CDS 32613 32981 . - 0 ID=cds-WP_014724471.1;Parent=gene-LDO38_RS24340;Dbxref=GenBank:WP_014724471.1;Name=WP_014724471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758266.1;locus_tag=LDO38_RS24340;product=YciI family protein;protein_id=WP_014724471.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 33064 33531 . + . ID=gene-LDO38_RS24345;Name=LDO38_RS24345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24345;old_locus_tag=BVI2075_70035 NZ_CAJZAL010000174.1 Protein Homology CDS 33064 33531 . + 0 ID=cds-WP_011881375.1;Parent=gene-LDO38_RS24345;Dbxref=GenBank:WP_011881375.1;Name=WP_011881375.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749655.1;locus_tag=LDO38_RS24345;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_011881375.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 33614 34825 . - . ID=gene-LDO38_RS24350;Name=LDO38_RS24350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24350;old_locus_tag=BVI2075_70036 NZ_CAJZAL010000174.1 Protein Homology CDS 33614 34825 . - 0 ID=cds-WP_034194894.1;Parent=gene-LDO38_RS24350;Dbxref=GenBank:WP_034194894.1;Name=WP_034194894.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881374.1;locus_tag=LDO38_RS24350;product=MFS transporter;protein_id=WP_034194894.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 34896 35930 . + . ID=gene-LDO38_RS24355;Name=LDO38_RS24355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24355;old_locus_tag=BVI2075_70037 NZ_CAJZAL010000174.1 Protein Homology CDS 34896 35930 . + 0 ID=cds-WP_069246563.1;Parent=gene-LDO38_RS24355;Dbxref=GenBank:WP_069246563.1;Name=WP_069246563.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365359.1;locus_tag=LDO38_RS24355;product=AraC family transcriptional regulator;protein_id=WP_069246563.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 36020 37933 . - . ID=gene-LDO38_RS24360;Name=LDO38_RS24360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24360;old_locus_tag=BVI2075_70038 NZ_CAJZAL010000174.1 Protein Homology CDS 36020 37933 . - 0 ID=cds-WP_059696507.1;Parent=gene-LDO38_RS24360;Dbxref=GenBank:WP_059696507.1;Name=WP_059696507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660212.1;locus_tag=LDO38_RS24360;product=DUF3857 domain-containing transglutaminase family protein;protein_id=WP_059696507.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 38361 39224 . + . ID=gene-LDO38_RS24365;Name=LDO38_RS24365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24365;old_locus_tag=BVI2075_70039 NZ_CAJZAL010000174.1 Protein Homology CDS 38361 39224 . + 0 ID=cds-WP_224056657.1;Parent=gene-LDO38_RS24365;Dbxref=GenBank:WP_224056657.1;Name=WP_224056657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397815.1;locus_tag=LDO38_RS24365;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_224056657.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 39279 41282 . - . ID=gene-LDO38_RS24370;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=LDO38_RS24370;old_locus_tag=BVI2075_70040 NZ_CAJZAL010000174.1 Protein Homology CDS 39279 41282 . - 0 ID=cds-WP_011881370.1;Parent=gene-LDO38_RS24370;Dbxref=GenBank:WP_011881370.1;Name=WP_011881370.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758253.1;locus_tag=LDO38_RS24370;product=cyclic di-GMP phosphodiesterase;protein_id=WP_011881370.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 41954 45598 . - . ID=gene-LDO38_RS24375;Name=LDO38_RS24375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24375;old_locus_tag=BVI2075_70041 NZ_CAJZAL010000174.1 Protein Homology CDS 41954 45598 . - 0 ID=cds-WP_069239931.1;Parent=gene-LDO38_RS24375;Dbxref=GenBank:WP_069239931.1;Name=WP_069239931.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881369.1;locus_tag=LDO38_RS24375;product=hydantoinase B/oxoprolinase family protein;protein_id=WP_069239931.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 45716 47023 . - . ID=gene-LDO38_RS24380;Name=LDO38_RS24380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24380;old_locus_tag=BVI2075_70042 NZ_CAJZAL010000174.1 Protein Homology CDS 45716 47023 . - 0 ID=cds-WP_059623024.1;Parent=gene-LDO38_RS24380;Dbxref=GenBank:WP_059623024.1;Name=WP_059623024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356167.1;locus_tag=LDO38_RS24380;product=MFS transporter;protein_id=WP_059623024.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 47094 47867 . - . ID=gene-LDO38_RS24385;Name=LDO38_RS24385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24385;old_locus_tag=BVI2075_70043 NZ_CAJZAL010000174.1 Protein Homology CDS 47094 47867 . - 0 ID=cds-WP_011881367.1;Parent=gene-LDO38_RS24385;Dbxref=GenBank:WP_011881367.1;Name=WP_011881367.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694590.1;locus_tag=LDO38_RS24385;product=putative hydro-lyase;protein_id=WP_011881367.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 48073 49005 . + . ID=gene-LDO38_RS24390;Name=LDO38_RS24390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24390;old_locus_tag=BVI2075_70044 NZ_CAJZAL010000174.1 Protein Homology CDS 48073 49005 . + 0 ID=cds-WP_011881366.1;Parent=gene-LDO38_RS24390;Dbxref=GenBank:WP_011881366.1;Name=WP_011881366.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330520.1;locus_tag=LDO38_RS24390;product=LysR family transcriptional regulator;protein_id=WP_011881366.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 49169 50122 . - . ID=gene-LDO38_RS24395;Name=LDO38_RS24395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24395;old_locus_tag=BVI2075_70045 NZ_CAJZAL010000174.1 Protein Homology CDS 49169 50122 . - 0 ID=cds-WP_014724458.1;Parent=gene-LDO38_RS24395;Dbxref=GenBank:WP_014724458.1;Name=WP_014724458.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724458.1;locus_tag=LDO38_RS24395;product=LysR family transcriptional regulator;protein_id=WP_014724458.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 50249 51268 . + . ID=gene-LDO38_RS24400;Name=LDO38_RS24400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24400;old_locus_tag=BVI2075_70046 NZ_CAJZAL010000174.1 Protein Homology CDS 50249 51268 . + 0 ID=cds-WP_011881364.1;Parent=gene-LDO38_RS24400;Dbxref=GenBank:WP_011881364.1;Name=WP_011881364.1;Ontology_term=GO:0008270,GO:0016491,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881364.1;locus_tag=LDO38_RS24400;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_011881364.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 51419 52567 . - . ID=gene-LDO38_RS24405;Name=LDO38_RS24405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24405;old_locus_tag=BVI2075_70047 NZ_CAJZAL010000174.1 Protein Homology CDS 51419 52567 . - 0 ID=cds-WP_014724456.1;Parent=gene-LDO38_RS24405;Dbxref=GenBank:WP_014724456.1;Name=WP_014724456.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900333.1;locus_tag=LDO38_RS24405;product=porin;protein_id=WP_014724456.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 52776 53390 . + . ID=gene-LDO38_RS24410;Name=LDO38_RS24410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24410;old_locus_tag=BVI2075_70048 NZ_CAJZAL010000174.1 Protein Homology CDS 52776 53390 . + 0 ID=cds-WP_059890507.1;Parent=gene-LDO38_RS24410;Dbxref=GenBank:WP_059890507.1;Name=WP_059890507.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495723.1;locus_tag=LDO38_RS24410;product=LysE family transporter;protein_id=WP_059890507.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 53434 54225 . - . ID=gene-LDO38_RS24415;Name=LDO38_RS24415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24415;old_locus_tag=BVI2075_70049 NZ_CAJZAL010000174.1 Protein Homology CDS 53434 54225 . - 0 ID=cds-WP_069246608.1;Parent=gene-LDO38_RS24415;Dbxref=GenBank:WP_069246608.1;Name=WP_069246608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484617.1;locus_tag=LDO38_RS24415;product=alpha/beta fold hydrolase;protein_id=WP_069246608.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 54307 54666 . - . ID=gene-LDO38_RS24420;Name=LDO38_RS24420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24420;old_locus_tag=BVI2075_70050 NZ_CAJZAL010000174.1 Protein Homology CDS 54307 54666 . - 0 ID=cds-WP_059623070.1;Parent=gene-LDO38_RS24420;Dbxref=GenBank:WP_059623070.1;Name=WP_059623070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479766.1;locus_tag=LDO38_RS24420;product=DUF4148 domain-containing protein;protein_id=WP_059623070.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 54942 55466 . - . ID=gene-LDO38_RS24425;Name=LDO38_RS24425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24425;old_locus_tag=BVI2075_70051 NZ_CAJZAL010000174.1 Protein Homology CDS 54942 55466 . - 0 ID=cds-WP_014724452.1;Parent=gene-LDO38_RS24425;Dbxref=GenBank:WP_014724452.1;Name=WP_014724452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757012.1;locus_tag=LDO38_RS24425;product=cytochrome P460 family protein;protein_id=WP_014724452.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 55466 56509 . - . ID=gene-LDO38_RS24430;Name=LDO38_RS24430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24430;old_locus_tag=BVI2075_70052 NZ_CAJZAL010000174.1 Protein Homology CDS 55466 56509 . - 0 ID=cds-WP_059735870.1;Parent=gene-LDO38_RS24430;Dbxref=GenBank:WP_059735870.1;Name=WP_059735870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900344.1;locus_tag=LDO38_RS24430;product=alpha/beta fold hydrolase;protein_id=WP_059735870.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 56756 58033 . - . ID=gene-LDO38_RS24435;Name=LDO38_RS24435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24435;old_locus_tag=BVI2075_70053 NZ_CAJZAL010000174.1 Protein Homology CDS 56756 58033 . - 0 ID=cds-WP_011881357.1;Parent=gene-LDO38_RS24435;Dbxref=GenBank:WP_011881357.1;Name=WP_011881357.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365336.1;locus_tag=LDO38_RS24435;product=epoxide hydrolase family protein;protein_id=WP_011881357.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 58214 58810 . - . ID=gene-LDO38_RS24440;Name=LDO38_RS24440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24440;old_locus_tag=BVI2075_70054 NZ_CAJZAL010000174.1 Protein Homology CDS 58214 58810 . - 0 ID=cds-WP_059735869.1;Parent=gene-LDO38_RS24440;Dbxref=GenBank:WP_059735869.1;Name=WP_059735869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900347.1;locus_tag=LDO38_RS24440;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_059735869.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 58901 59086 . - . ID=gene-LDO38_RS24445;Name=LDO38_RS24445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24445;old_locus_tag=BVI2075_70055 NZ_CAJZAL010000174.1 Protein Homology CDS 58901 59086 . - 0 ID=cds-WP_069224512.1;Parent=gene-LDO38_RS24445;Dbxref=GenBank:WP_069224512.1;Name=WP_069224512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365334.1;locus_tag=LDO38_RS24445;product=hypothetical protein;protein_id=WP_069224512.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 59097 60296 . - . ID=gene-LDO38_RS24450;Name=LDO38_RS24450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24450;old_locus_tag=BVI2075_70056 NZ_CAJZAL010000174.1 Protein Homology CDS 59097 60296 . - 0 ID=cds-WP_045578268.1;Parent=gene-LDO38_RS24450;Dbxref=GenBank:WP_045578268.1;Name=WP_045578268.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365333.1;locus_tag=LDO38_RS24450;product=PLP-dependent aminotransferase family protein;protein_id=WP_045578268.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 60668 60856 . - . ID=gene-LDO38_RS24455;Name=LDO38_RS24455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24455;old_locus_tag=BVI2075_70058 NZ_CAJZAL010000174.1 Protein Homology CDS 60668 60856 . - 0 ID=cds-WP_014724447.1;Parent=gene-LDO38_RS24455;Dbxref=GenBank:WP_014724447.1;Name=WP_014724447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724447.1;locus_tag=LDO38_RS24455;product=hypothetical protein;protein_id=WP_014724447.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 60917 62101 . - . ID=gene-LDO38_RS24460;Name=LDO38_RS24460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24460;old_locus_tag=BVI2075_70059 NZ_CAJZAL010000174.1 Protein Homology CDS 60917 62101 . - 0 ID=cds-WP_011881353.1;Parent=gene-LDO38_RS24460;Dbxref=GenBank:WP_011881353.1;Name=WP_011881353.1;Ontology_term=GO:0016746,GO:0016747;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881353.1;locus_tag=LDO38_RS24460;product=thiolase family protein;protein_id=WP_011881353.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 62271 62456 . - . ID=gene-LDO38_RS24465;Name=LDO38_RS24465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24465;old_locus_tag=BVI2075_70061 NZ_CAJZAL010000174.1 Protein Homology CDS 62271 62456 . - 0 ID=cds-WP_011881352.1;Parent=gene-LDO38_RS24465;Dbxref=GenBank:WP_011881352.1;Name=WP_011881352.1;Ontology_term=GO:0043448,GO:0005506,GO:0009055;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=alkane catabolic process|0043448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749607.1;locus_tag=LDO38_RS24465;product=rubredoxin;protein_id=WP_011881352.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 62453 63376 . - . ID=gene-LDO38_RS24470;Name=LDO38_RS24470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24470;old_locus_tag=BVI2075_70062 NZ_CAJZAL010000174.1 Protein Homology CDS 62453 63376 . - 0 ID=cds-WP_011881351.1;Parent=gene-LDO38_RS24470;Dbxref=GenBank:WP_011881351.1;Name=WP_011881351.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881351.1;locus_tag=LDO38_RS24470;product=alpha/beta hydrolase;protein_id=WP_011881351.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 63376 64473 . - . ID=gene-LDO38_RS24475;Name=LDO38_RS24475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24475;old_locus_tag=BVI2075_70063 NZ_CAJZAL010000174.1 Protein Homology CDS 63376 64473 . - 0 ID=cds-WP_011881350.1;Parent=gene-LDO38_RS24475;Dbxref=GenBank:WP_011881350.1;Name=WP_011881350.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749605.1;locus_tag=LDO38_RS24475;product=fatty acid desaturase;protein_id=WP_011881350.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 64487 64807 . - . ID=gene-LDO38_RS24480;Name=LDO38_RS24480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24480;old_locus_tag=BVI2075_70064 NZ_CAJZAL010000174.1 Protein Homology CDS 64487 64807 . - 0 ID=cds-WP_011881349.1;Parent=gene-LDO38_RS24480;Dbxref=GenBank:WP_011881349.1;Name=WP_011881349.1;Ontology_term=GO:0006633,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749604.1;locus_tag=LDO38_RS24480;product=acyl carrier protein;protein_id=WP_011881349.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 64863 65846 . - . ID=gene-LDO38_RS24485;Name=LDO38_RS24485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24485;old_locus_tag=BVI2075_70065 NZ_CAJZAL010000174.1 Protein Homology CDS 64863 65846 . - 0 ID=cds-WP_069239924.1;Parent=gene-LDO38_RS24485;Dbxref=GenBank:WP_069239924.1;Name=WP_069239924.1;Ontology_term=GO:0006633,GO:0006636,GO:0016717,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on paired donors%2C with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water|0016717||IEA,metal ion binding|0046872||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,unsaturated fatty acid biosynthetic process|0006636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724444.1;locus_tag=LDO38_RS24485;product=acyl-CoA desaturase;protein_id=WP_069239924.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 65872 66831 . - . ID=gene-LDO38_RS24490;Name=LDO38_RS24490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24490;old_locus_tag=BVI2075_70066 NZ_CAJZAL010000174.1 Protein Homology CDS 65872 66831 . - 0 ID=cds-WP_034194882.1;Parent=gene-LDO38_RS24490;Dbxref=GenBank:WP_034194882.1;Name=WP_034194882.1;Ontology_term=GO:0006633,GO:0006636,GO:0016717,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on paired donors%2C with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water|0016717||IEA,metal ion binding|0046872||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,unsaturated fatty acid biosynthetic process|0006636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881347.1;locus_tag=LDO38_RS24490;product=acyl-CoA desaturase;protein_id=WP_034194882.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 66892 68700 . - . ID=gene-LDO38_RS24495;Name=LDO38_RS24495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24495;old_locus_tag=BVI2075_70067 NZ_CAJZAL010000174.1 Protein Homology CDS 66892 68700 . - 0 ID=cds-WP_224056658.1;Parent=gene-LDO38_RS24495;Dbxref=GenBank:WP_224056658.1;Name=WP_224056658.1;Ontology_term=GO:0006631,GO:0016874;gbkey=CDS;go_function=ligase activity|0016874||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881346.1;locus_tag=LDO38_RS24495;product=fatty acyl-AMP ligase;protein_id=WP_224056658.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 68779 70197 . - . ID=gene-LDO38_RS24500;Name=LDO38_RS24500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24500;old_locus_tag=BVI2075_70068 NZ_CAJZAL010000174.1 Protein Homology CDS 68779 70197 . - 0 ID=cds-WP_046425884.1;Parent=gene-LDO38_RS24500;Dbxref=GenBank:WP_046425884.1;Name=WP_046425884.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881345.1;locus_tag=LDO38_RS24500;product=MFS transporter;protein_id=WP_046425884.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 70202 71119 . - . ID=gene-LDO38_RS24505;Name=LDO38_RS24505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24505;old_locus_tag=BVI2075_70069 NZ_CAJZAL010000174.1 Protein Homology CDS 70202 71119 . - 0 ID=cds-WP_069239923.1;Parent=gene-LDO38_RS24505;Dbxref=GenBank:WP_069239923.1;Name=WP_069239923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724440.1;locus_tag=LDO38_RS24505;product=hypothetical protein;protein_id=WP_069239923.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 71116 72120 . - . ID=gene-LDO38_RS24510;Name=LDO38_RS24510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24510;old_locus_tag=BVI2075_70070 NZ_CAJZAL010000174.1 Protein Homology CDS 71116 72120 . - 0 ID=cds-WP_045578272.1;Parent=gene-LDO38_RS24510;Dbxref=GenBank:WP_045578272.1;Name=WP_045578272.1;Ontology_term=GO:0016491,GO:0051537;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724439.1;locus_tag=LDO38_RS24510;product=aromatic ring-hydroxylating dioxygenase subunit alpha;protein_id=WP_045578272.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 72201 73283 . - . ID=gene-LDO38_RS24515;Name=LDO38_RS24515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24515;old_locus_tag=BVI2075_70071 NZ_CAJZAL010000174.1 Protein Homology CDS 72201 73283 . - 0 ID=cds-WP_011881342.1;Parent=gene-LDO38_RS24515;Dbxref=GenBank:WP_011881342.1;Name=WP_011881342.1;Ontology_term=GO:0006633,GO:0016717,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on paired donors%2C with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water|0016717||IEA,metal ion binding|0046872||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756997.1;locus_tag=LDO38_RS24515;product=fatty acid desaturase family protein;protein_id=WP_011881342.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 73392 74777 . - . ID=gene-LDO38_RS24520;Name=LDO38_RS24520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24520;old_locus_tag=BVI2075_70072 NZ_CAJZAL010000174.1 Protein Homology CDS 73392 74777 . - 0 ID=cds-WP_059739699.1;Parent=gene-LDO38_RS24520;Dbxref=GenBank:WP_059739699.1;Name=WP_059739699.1;Ontology_term=GO:0000166,GO:0016491,GO:0071949;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749596.1;locus_tag=LDO38_RS24520;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_059739699.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 74950 76242 . - . ID=gene-LDO38_RS24525;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=LDO38_RS24525;old_locus_tag=BVI2075_70073 NZ_CAJZAL010000174.1 Protein Homology CDS 74950 76242 . - 0 ID=cds-WP_011881340.1;Parent=gene-LDO38_RS24525;Dbxref=GenBank:WP_011881340.1;Name=WP_011881340.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756995.1;locus_tag=LDO38_RS24525;product=beta-ketoacyl-ACP synthase II;protein_id=WP_011881340.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 76398 77057 . - . ID=gene-LDO38_RS24530;Name=LDO38_RS24530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24530;old_locus_tag=BVI2075_70074 NZ_CAJZAL010000174.1 Protein Homology CDS 76398 77057 . - 0 ID=cds-WP_011881339.1;Parent=gene-LDO38_RS24530;Dbxref=GenBank:WP_011881339.1;Name=WP_011881339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881339.1;locus_tag=LDO38_RS24530;product=acyl-homoserine-lactone synthase;protein_id=WP_011881339.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 77452 77835 . - . ID=gene-LDO38_RS24535;Name=LDO38_RS24535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24535;old_locus_tag=BVI2075_70076 NZ_CAJZAL010000174.1 Protein Homology CDS 77452 77835 . - 0 ID=cds-WP_034194879.1;Parent=gene-LDO38_RS24535;Dbxref=GenBank:WP_034194879.1;Name=WP_034194879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756993.1;locus_tag=LDO38_RS24535;product=DUF4902 domain-containing protein;protein_id=WP_034194879.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 78007 78225 . + . ID=gene-LDO38_RS24540;Name=LDO38_RS24540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24540 NZ_CAJZAL010000174.1 GeneMarkS-2+ CDS 78007 78225 . + 0 ID=cds-WP_124259904.1;Parent=gene-LDO38_RS24540;Dbxref=GenBank:WP_124259904.1;Name=WP_124259904.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS24540;product=hypothetical protein;protein_id=WP_124259904.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 78233 78976 . + . ID=gene-LDO38_RS24545;Name=LDO38_RS24545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24545;old_locus_tag=BVI2075_70077 NZ_CAJZAL010000174.1 Protein Homology CDS 78233 78976 . + 0 ID=cds-WP_224022544.1;Parent=gene-LDO38_RS24545;Dbxref=GenBank:WP_224022544.1;Name=WP_224022544.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756992.1;locus_tag=LDO38_RS24545;product=helix-turn-helix transcriptional regulator;protein_id=WP_224022544.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 79171 80517 . + . ID=gene-LDO38_RS24550;Name=LDO38_RS24550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24550;old_locus_tag=BVI2075_70078 NZ_CAJZAL010000174.1 Protein Homology CDS 79171 80517 . + 0 ID=cds-WP_034194878.1;Parent=gene-LDO38_RS24550;Dbxref=GenBank:WP_034194878.1;Name=WP_034194878.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365331.1;locus_tag=LDO38_RS24550;product=MFS transporter;protein_id=WP_034194878.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 80606 81178 . + . ID=gene-LDO38_RS24555;Name=LDO38_RS24555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24555;old_locus_tag=BVI2075_70079 NZ_CAJZAL010000174.1 Protein Homology CDS 80606 81178 . + 0 ID=cds-WP_034194877.1;Parent=gene-LDO38_RS24555;Dbxref=GenBank:WP_034194877.1;Name=WP_034194877.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756989.1;locus_tag=LDO38_RS24555;product=PAS and helix-turn-helix domain-containing protein;protein_id=WP_034194877.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 81308 82480 . - . ID=gene-LDO38_RS24560;Name=LDO38_RS24560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24560;old_locus_tag=BVI2075_70080 NZ_CAJZAL010000174.1 Protein Homology CDS 81308 82480 . - 0 ID=cds-WP_014724430.1;Parent=gene-LDO38_RS24560;Dbxref=GenBank:WP_014724430.1;Name=WP_014724430.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356268.1;locus_tag=LDO38_RS24560;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_014724430.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 82625 83776 . - . ID=gene-LDO38_RS24565;Name=LDO38_RS24565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24565;old_locus_tag=BVI2075_70081 NZ_CAJZAL010000174.1 Protein Homology CDS 82625 83776 . - 0 ID=cds-WP_014724429.1;Parent=gene-LDO38_RS24565;Dbxref=GenBank:WP_014724429.1;Name=WP_014724429.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217652.1;locus_tag=LDO38_RS24565;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_014724429.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 84088 84291 . - . ID=gene-LDO38_RS24570;Name=LDO38_RS24570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24570;old_locus_tag=BVI2075_70083 NZ_CAJZAL010000174.1 Protein Homology CDS 84088 84291 . - 0 ID=cds-WP_059739703.1;Parent=gene-LDO38_RS24570;Dbxref=GenBank:WP_059739703.1;Name=WP_059739703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724428.1;locus_tag=LDO38_RS24570;product=CsbD family protein;protein_id=WP_059739703.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 84445 85965 . - . ID=gene-LDO38_RS24575;Name=LDO38_RS24575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24575;old_locus_tag=BVI2075_70084 NZ_CAJZAL010000174.1 Protein Homology CDS 84445 85965 . - 0 ID=cds-WP_014724427.1;Parent=gene-LDO38_RS24575;Dbxref=GenBank:WP_014724427.1;Name=WP_014724427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724427.1;locus_tag=LDO38_RS24575;product=helix-turn-helix transcriptional regulator;protein_id=WP_014724427.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 86355 86519 . + . ID=gene-LDO38_RS24580;Name=LDO38_RS24580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24580;old_locus_tag=BVI2075_70087 NZ_CAJZAL010000174.1 Protein Homology CDS 86355 86519 . + 0 ID=cds-WP_006484627.1;Parent=gene-LDO38_RS24580;Dbxref=GenBank:WP_006484627.1;Name=WP_006484627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484627.1;locus_tag=LDO38_RS24580;product=hypothetical protein;protein_id=WP_006484627.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 86613 86963 . + . ID=gene-LDO38_RS24585;Name=LDO38_RS24585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24585;old_locus_tag=BVI2075_70088 NZ_CAJZAL010000174.1 Protein Homology CDS 86613 86963 . + 0 ID=cds-WP_041494066.1;Parent=gene-LDO38_RS24585;Dbxref=GenBank:WP_041494066.1;Name=WP_041494066.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749572.1;locus_tag=LDO38_RS24585;product=BON domain-containing protein;protein_id=WP_041494066.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 87017 87214 . + . ID=gene-LDO38_RS24590;Name=LDO38_RS24590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24590;old_locus_tag=BVI2075_70089 NZ_CAJZAL010000174.1 Protein Homology CDS 87017 87214 . + 0 ID=cds-WP_014724426.1;Parent=gene-LDO38_RS24590;Dbxref=GenBank:WP_014724426.1;Name=WP_014724426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397770.1;locus_tag=LDO38_RS24590;product=CsbD family protein;protein_id=WP_014724426.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 87441 88475 . - . ID=gene-LDO38_RS24595;Name=LDO38_RS24595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24595;old_locus_tag=BVI2075_70091 NZ_CAJZAL010000174.1 Protein Homology CDS 87441 88475 . - 0 ID=cds-WP_059475667.1;Parent=gene-LDO38_RS24595;Dbxref=GenBank:WP_059475667.1;Name=WP_059475667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724425.1;locus_tag=LDO38_RS24595;product=DUF1338 domain-containing protein;protein_id=WP_059475667.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 88696 89640 . + . ID=gene-LDO38_RS24600;Name=LDO38_RS24600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24600;old_locus_tag=BVI2075_70092 NZ_CAJZAL010000174.1 Protein Homology CDS 88696 89640 . + 0 ID=cds-WP_014724424.1;Parent=gene-LDO38_RS24600;Dbxref=GenBank:WP_014724424.1;Name=WP_014724424.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724424.1;locus_tag=LDO38_RS24600;product=LysR family transcriptional regulator;protein_id=WP_014724424.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 90104 91732 . + . ID=gene-LDO38_RS24605;Name=LDO38_RS24605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24605;old_locus_tag=BVI2075_70093 NZ_CAJZAL010000174.1 Protein Homology CDS 90104 91732 . + 0 ID=cds-WP_045578278.1;Parent=gene-LDO38_RS24605;Dbxref=GenBank:WP_045578278.1;Name=WP_045578278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766794.1;locus_tag=LDO38_RS24605;product=NADP-dependent glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_045578278.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 91842 92078 . - . ID=gene-LDO38_RS24610;Name=LDO38_RS24610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24610;old_locus_tag=BVI2075_70094 NZ_CAJZAL010000174.1 GeneMarkS-2+ CDS 91842 92078 . - 0 ID=cds-WP_034194870.1;Parent=gene-LDO38_RS24610;Dbxref=GenBank:WP_034194870.1;Name=WP_034194870.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS24610;product=hypothetical protein;protein_id=WP_034194870.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 92149 92613 . - . ID=gene-LDO38_RS24615;Name=LDO38_RS24615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24615;old_locus_tag=BVI2075_70095 NZ_CAJZAL010000174.1 Protein Homology CDS 92149 92613 . - 0 ID=cds-WP_014724421.1;Parent=gene-LDO38_RS24615;Dbxref=GenBank:WP_014724421.1;Name=WP_014724421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724421.1;locus_tag=LDO38_RS24615;product=DUF2846 domain-containing protein;protein_id=WP_014724421.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 92767 93882 . - . ID=gene-LDO38_RS24620;Name=LDO38_RS24620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24620;old_locus_tag=BVI2075_70096 NZ_CAJZAL010000174.1 GeneMarkS-2+ CDS 92767 93882 . - 0 ID=cds-WP_124259906.1;Parent=gene-LDO38_RS24620;Dbxref=GenBank:WP_124259906.1;Name=WP_124259906.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS24620;product=hypothetical protein;protein_id=WP_124259906.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 94414 94998 . - . ID=gene-LDO38_RS24625;Name=LDO38_RS24625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24625;old_locus_tag=BVI2075_70098 NZ_CAJZAL010000174.1 Protein Homology CDS 94414 94998 . - 0 ID=cds-WP_059890522.1;Parent=gene-LDO38_RS24625;Dbxref=GenBank:WP_059890522.1;Name=WP_059890522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881337.1;locus_tag=LDO38_RS24625;product=hypothetical protein;protein_id=WP_059890522.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 95272 97026 . - . ID=gene-LDO38_RS24630;Name=LDO38_RS24630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24630;old_locus_tag=BVI2075_70100 NZ_CAJZAL010000174.1 Protein Homology CDS 95272 97026 . - 0 ID=cds-WP_069246564.1;Parent=gene-LDO38_RS24630;Dbxref=GenBank:WP_069246564.1;Name=WP_069246564.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658790.1;locus_tag=LDO38_RS24630;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_069246564.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 97452 97721 . - . ID=gene-LDO38_RS24635;Name=LDO38_RS24635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24635 NZ_CAJZAL010000174.1 Protein Homology CDS 97452 97721 . - 0 ID=cds-WP_011881335.1;Parent=gene-LDO38_RS24635;Dbxref=GenBank:WP_011881335.1;Name=WP_011881335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881335.1;locus_tag=LDO38_RS24635;product=hypothetical protein;protein_id=WP_011881335.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 98282 98680 . - . ID=gene-LDO38_RS24640;Name=LDO38_RS24640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24640;old_locus_tag=BVI2075_70104 NZ_CAJZAL010000174.1 GeneMarkS-2+ CDS 98282 98680 . - 0 ID=cds-WP_034194866.1;Parent=gene-LDO38_RS24640;Dbxref=GenBank:WP_034194866.1;Name=WP_034194866.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS24640;product=hypothetical protein;protein_id=WP_034194866.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 99744 99965 . - . ID=gene-LDO38_RS24645;Name=LDO38_RS24645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24645;old_locus_tag=BVI2075_70107 NZ_CAJZAL010000174.1 Protein Homology CDS 99744 99965 . - 0 ID=cds-WP_034194865.1;Parent=gene-LDO38_RS24645;Dbxref=GenBank:WP_034194865.1;Name=WP_034194865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013592178.1;locus_tag=LDO38_RS24645;product=hypothetical protein;protein_id=WP_034194865.1;transl_table=11 NZ_CAJZAL010000174.1 RefSeq gene 99962 100668 . - . ID=gene-LDO38_RS24650;Name=LDO38_RS24650;end_range=100668,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24650;old_locus_tag=BVI2075_70108;partial=true NZ_CAJZAL010000174.1 Protein Homology CDS 99962 100668 . - 2 ID=cds-WP_224056659.1;Parent=gene-LDO38_RS24650;Dbxref=GenBank:WP_224056659.1;Name=WP_224056659.1;end_range=100668,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881332.1;locus_tag=LDO38_RS24650;partial=true;product=DUF6883 domain-containing protein;protein_id=WP_224056659.1;transl_table=11 ##sequence-region NZ_CAJZAL010000175.1 1 21355 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000175.1 RefSeq region 1 21355 . + . ID=NZ_CAJZAL010000175.1:1..21355;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_70 NZ_CAJZAL010000175.1 RefSeq gene 290 1252 . - . ID=gene-LDO38_RS24655;Name=LDO38_RS24655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24655;old_locus_tag=BVI2075_700002 NZ_CAJZAL010000175.1 Protein Homology CDS 290 1252 . - 0 ID=cds-WP_060043893.1;Parent=gene-LDO38_RS24655;Dbxref=GenBank:WP_060043893.1;Name=WP_060043893.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017774869.1;locus_tag=LDO38_RS24655;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_060043893.1;transl_table=11 NZ_CAJZAL010000175.1 RefSeq gene 1249 2289 . - . ID=gene-LDO38_RS24660;Name=LDO38_RS24660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24660;old_locus_tag=BVI2075_700003 NZ_CAJZAL010000175.1 Protein Homology CDS 1249 2289 . - 0 ID=cds-WP_045579097.1;Parent=gene-LDO38_RS24660;Dbxref=GenBank:WP_045579097.1;Name=WP_045579097.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723057.1;locus_tag=LDO38_RS24660;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_045579097.1;transl_table=11 NZ_CAJZAL010000175.1 RefSeq gene 2286 2882 . - . ID=gene-LDO38_RS24665;Name=LDO38_RS24665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24665;old_locus_tag=BVI2075_700004 NZ_CAJZAL010000175.1 Protein Homology CDS 2286 2882 . - 0 ID=cds-WP_045579098.1;Parent=gene-LDO38_RS24665;Dbxref=GenBank:WP_045579098.1;Name=WP_045579098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366561.1;locus_tag=LDO38_RS24665;product=cupin domain-containing protein;protein_id=WP_045579098.1;transl_table=11 NZ_CAJZAL010000175.1 RefSeq gene 2879 3694 . - . ID=gene-LDO38_RS24670;Name=LDO38_RS24670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24670;old_locus_tag=BVI2075_700005 NZ_CAJZAL010000175.1 Protein Homology CDS 2879 3694 . - 0 ID=cds-WP_011884890.1;Parent=gene-LDO38_RS24670;Dbxref=GenBank:WP_011884890.1;Name=WP_011884890.1;Ontology_term=GO:0016812,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411927.1;locus_tag=LDO38_RS24670;product=cyclase family protein;protein_id=WP_011884890.1;transl_table=11 NZ_CAJZAL010000175.1 RefSeq gene 3691 4917 . - . ID=gene-LDO38_RS24675;Name=LDO38_RS24675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24675;old_locus_tag=BVI2075_700006 NZ_CAJZAL010000175.1 Protein Homology CDS 3691 4917 . - 0 ID=cds-WP_081057451.1;Parent=gene-LDO38_RS24675;Dbxref=GenBank:WP_081057451.1;Name=WP_081057451.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723055.1;locus_tag=LDO38_RS24675;product=MFS transporter;protein_id=WP_081057451.1;transl_table=11 NZ_CAJZAL010000175.1 RefSeq gene 4932 6062 . - . ID=gene-LDO38_RS24680;Name=LDO38_RS24680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24680;old_locus_tag=BVI2075_700007 NZ_CAJZAL010000175.1 Protein Homology CDS 4932 6062 . - 0 ID=cds-WP_224056660.1;Parent=gene-LDO38_RS24680;Dbxref=GenBank:WP_224056660.1;Name=WP_224056660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884888.1;locus_tag=LDO38_RS24680;product=FAD-dependent oxidoreductase;protein_id=WP_224056660.1;transl_table=11 NZ_CAJZAL010000175.1 RefSeq gene 6082 6453 . - . ID=gene-LDO38_RS24685;Name=LDO38_RS24685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24685;old_locus_tag=BVI2075_700008 NZ_CAJZAL010000175.1 Protein Homology CDS 6082 6453 . - 0 ID=cds-WP_059734204.1;Parent=gene-LDO38_RS24685;Dbxref=GenBank:WP_059734204.1;Name=WP_059734204.1;Ontology_term=GO:0046872,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884887.1;locus_tag=LDO38_RS24685;product=Rieske (2Fe-2S) protein;protein_id=WP_059734204.1;transl_table=11 NZ_CAJZAL010000175.1 RefSeq gene 6466 7416 . - . ID=gene-LDO38_RS24690;Name=LDO38_RS24690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24690;old_locus_tag=BVI2075_700009 NZ_CAJZAL010000175.1 Protein Homology CDS 6466 7416 . - 0 ID=cds-WP_124259894.1;Parent=gene-LDO38_RS24690;Dbxref=GenBank:WP_124259894.1;Name=WP_124259894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723052.1;locus_tag=LDO38_RS24690;product=VOC family protein;protein_id=WP_124259894.1;transl_table=11 NZ_CAJZAL010000175.1 RefSeq gene 7443 8606 . - . ID=gene-LDO38_RS24695;Name=LDO38_RS24695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24695;old_locus_tag=BVI2075_700010 NZ_CAJZAL010000175.1 Protein Homology CDS 7443 8606 . - 0 ID=cds-WP_059734202.1;Parent=gene-LDO38_RS24695;Dbxref=GenBank:WP_059734202.1;Name=WP_059734202.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723051.1;locus_tag=LDO38_RS24695;product=alpha/beta hydrolase family protein;protein_id=WP_059734202.1;transl_table=11 NZ_CAJZAL010000175.1 RefSeq gene 8658 9572 . - . ID=gene-LDO38_RS24700;Name=LDO38_RS24700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24700;old_locus_tag=BVI2075_700012 NZ_CAJZAL010000175.1 Protein Homology CDS 8658 9572 . - 0 ID=cds-WP_124259893.1;Parent=gene-LDO38_RS24700;Dbxref=GenBank:WP_124259893.1;Name=WP_124259893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884882.1;locus_tag=LDO38_RS24700;product=SphA family protein;protein_id=WP_124259893.1;transl_table=11 NZ_CAJZAL010000175.1 RefSeq gene 9870 10796 . + . ID=gene-LDO38_RS24705;Name=LDO38_RS24705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24705;old_locus_tag=BVI2075_700013 NZ_CAJZAL010000175.1 Protein Homology CDS 9870 10796 . + 0 ID=cds-WP_011884880.1;Parent=gene-LDO38_RS24705;Dbxref=GenBank:WP_011884880.1;Name=WP_011884880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884880.1;locus_tag=LDO38_RS24705;product=LysR family transcriptional regulator;protein_id=WP_011884880.1;transl_table=11 NZ_CAJZAL010000175.1 RefSeq gene 11300 12640 . - . ID=gene-LDO38_RS24710;Name=LDO38_RS24710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24710;old_locus_tag=BVI2075_700014 NZ_CAJZAL010000175.1 Protein Homology CDS 11300 12640 . - 0 ID=cds-WP_011884877.1;Parent=gene-LDO38_RS24710;Dbxref=GenBank:WP_011884877.1;Name=WP_011884877.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404778.1;locus_tag=LDO38_RS24710;product=APC family permease;protein_id=WP_011884877.1;transl_table=11 NZ_CAJZAL010000175.1 RefSeq gene 12777 13622 . - . ID=gene-LDO38_RS24715;Name=LDO38_RS24715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24715;old_locus_tag=BVI2075_700016 NZ_CAJZAL010000175.1 Protein Homology CDS 12777 13622 . - 0 ID=cds-WP_011884876.1;Parent=gene-LDO38_RS24715;Dbxref=GenBank:WP_011884876.1;Name=WP_011884876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338460.1;locus_tag=LDO38_RS24715;product=carbon-nitrogen hydrolase family protein;protein_id=WP_011884876.1;transl_table=11 NZ_CAJZAL010000175.1 RefSeq gene 13773 14591 . + . ID=gene-LDO38_RS24720;Name=LDO38_RS24720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24720;old_locus_tag=BVI2075_700015 NZ_CAJZAL010000175.1 Protein Homology CDS 13773 14591 . + 0 ID=cds-WP_011884874.1;Parent=gene-LDO38_RS24720;Dbxref=GenBank:WP_011884874.1;Name=WP_011884874.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656921.1;locus_tag=LDO38_RS24720;product=response regulator transcription factor;protein_id=WP_011884874.1;transl_table=11 NZ_CAJZAL010000175.1 RefSeq gene 14701 14985 . + . ID=gene-LDO38_RS24725;Name=LDO38_RS24725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24725 NZ_CAJZAL010000175.1 GeneMarkS-2+ CDS 14701 14985 . + 0 ID=cds-WP_166677041.1;Parent=gene-LDO38_RS24725;Dbxref=GenBank:WP_166677041.1;Name=WP_166677041.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS24725;product=hypothetical protein;protein_id=WP_166677041.1;transl_table=11 NZ_CAJZAL010000175.1 RefSeq gene 15070 15441 . - . ID=gene-LDO38_RS24730;Name=LDO38_RS24730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24730;old_locus_tag=BVI2075_700019 NZ_CAJZAL010000175.1 Protein Homology CDS 15070 15441 . - 0 ID=cds-WP_014723046.1;Parent=gene-LDO38_RS24730;Dbxref=GenBank:WP_014723046.1;Name=WP_014723046.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764300.1;locus_tag=LDO38_RS24730;product=GFA family protein;protein_id=WP_014723046.1;transl_table=11 NZ_CAJZAL010000175.1 RefSeq gene 15599 16699 . - . ID=gene-LDO38_RS24735;Name=LDO38_RS24735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24735;old_locus_tag=BVI2075_700020 NZ_CAJZAL010000175.1 Protein Homology CDS 15599 16699 . - 0 ID=cds-WP_059462567.1;Parent=gene-LDO38_RS24735;Dbxref=GenBank:WP_059462567.1;Name=WP_059462567.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757924.1;locus_tag=LDO38_RS24735;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_059462567.1;transl_table=11 NZ_CAJZAL010000175.1 RefSeq gene 17058 18215 . + . ID=gene-LDO38_RS24740;Name=LDO38_RS24740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24740;old_locus_tag=BVI2075_700021 NZ_CAJZAL010000175.1 Protein Homology CDS 17058 18215 . + 0 ID=cds-WP_224056661.1;Parent=gene-LDO38_RS24740;Dbxref=GenBank:WP_224056661.1;Name=WP_224056661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884868.1;locus_tag=LDO38_RS24740;product=hypothetical protein;protein_id=WP_224056661.1;transl_table=11 NZ_CAJZAL010000175.1 RefSeq gene 18391 18603 . - . ID=gene-LDO38_RS24745;Name=LDO38_RS24745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24745;old_locus_tag=BVI2075_700022 NZ_CAJZAL010000175.1 Protein Homology CDS 18391 18603 . - 0 ID=cds-WP_059462568.1;Parent=gene-LDO38_RS24745;Dbxref=GenBank:WP_059462568.1;Name=WP_059462568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213326.1;locus_tag=LDO38_RS24745;product=hypothetical protein;protein_id=WP_059462568.1;transl_table=11 NZ_CAJZAL010000175.1 RefSeq gene 18725 19159 . - . ID=gene-LDO38_RS24750;Name=LDO38_RS24750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24750;old_locus_tag=BVI2075_700023 NZ_CAJZAL010000175.1 Protein Homology CDS 18725 19159 . - 0 ID=cds-WP_011884866.1;Parent=gene-LDO38_RS24750;Dbxref=GenBank:WP_011884866.1;Name=WP_011884866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884866.1;locus_tag=LDO38_RS24750;product=hypothetical protein;protein_id=WP_011884866.1;transl_table=11 NZ_CAJZAL010000175.1 RefSeq gene 19572 20276 . + . ID=gene-LDO38_RS24755;Name=LDO38_RS24755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24755;old_locus_tag=BVI2075_700025 NZ_CAJZAL010000175.1 Protein Homology CDS 19572 20276 . + 0 ID=cds-WP_014723040.1;Parent=gene-LDO38_RS24755;Dbxref=GenBank:WP_014723040.1;Name=WP_014723040.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213332.1;locus_tag=LDO38_RS24755;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_014723040.1;transl_table=11 NZ_CAJZAL010000175.1 RefSeq gene 20457 20969 . - . ID=gene-LDO38_RS24760;Name=LDO38_RS24760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24760;old_locus_tag=BVI2075_700026 NZ_CAJZAL010000175.1 Protein Homology CDS 20457 20969 . - 0 ID=cds-WP_034193133.1;Parent=gene-LDO38_RS24760;Dbxref=GenBank:WP_034193133.1;Name=WP_034193133.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884863.1;locus_tag=LDO38_RS24760;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_034193133.1;transl_table=11 NZ_CAJZAL010000175.1 RefSeq pseudogene 21101 21355 . + . ID=gene-LDO38_RS24765;Name=LDO38_RS24765;end_range=21355,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS24765;partial=true;pseudo=true NZ_CAJZAL010000175.1 Protein Homology CDS 21101 21355 . + 0 ID=cds-LDO38_RS24765;Parent=gene-LDO38_RS24765;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=21355,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884862.1;locus_tag=LDO38_RS24765;partial=true;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000176.1 1 24393 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000176.1 RefSeq region 1 24393 . + . ID=NZ_CAJZAL010000176.1:1..24393;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_71 NZ_CAJZAL010000176.1 RefSeq pseudogene 1 1240 . + . ID=gene-LDO38_RS24770;Name=LDO38_RS24770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS24770;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000176.1 Protein Homology CDS 1 1240 . + 1 ID=cds-LDO38_RS24770;Parent=gene-LDO38_RS24770;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544929.1;locus_tag=LDO38_RS24770;partial=true;product=ribonuclease E/G;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000176.1 RefSeq gene 1366 2478 . + . ID=gene-LDO38_RS24775;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=LDO38_RS24775;old_locus_tag=BVI2075_710002 NZ_CAJZAL010000176.1 Protein Homology CDS 1366 2478 . + 0 ID=cds-WP_011883929.1;Parent=gene-LDO38_RS24775;Dbxref=GenBank:WP_011883929.1;Name=WP_011883929.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213801.1;locus_tag=LDO38_RS24775;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_011883929.1;transl_table=11 NZ_CAJZAL010000176.1 RefSeq gene 2507 3124 . + . ID=gene-LDO38_RS24780;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=LDO38_RS24780;old_locus_tag=BVI2075_710003 NZ_CAJZAL010000176.1 Protein Homology CDS 2507 3124 . + 0 ID=cds-WP_014722710.1;Parent=gene-LDO38_RS24780;Dbxref=GenBank:WP_014722710.1;Name=WP_014722710.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488635.1;locus_tag=LDO38_RS24780;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_014722710.1;transl_table=11 NZ_CAJZAL010000176.1 RefSeq gene 3230 4525 . + . ID=gene-LDO38_RS24785;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=LDO38_RS24785;old_locus_tag=BVI2075_710004 NZ_CAJZAL010000176.1 Protein Homology CDS 3230 4525 . + 0 ID=cds-WP_014722709.1;Parent=gene-LDO38_RS24785;Dbxref=GenBank:WP_014722709.1;Name=WP_014722709.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883925.1;locus_tag=LDO38_RS24785;product=molybdopterin molybdotransferase MoeA;protein_id=WP_014722709.1;transl_table=11 NZ_CAJZAL010000176.1 RefSeq gene 4563 4838 . + . ID=gene-LDO38_RS24790;Name=LDO38_RS24790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24790;old_locus_tag=BVI2075_710005 NZ_CAJZAL010000176.1 Protein Homology CDS 4563 4838 . + 0 ID=cds-WP_006476519.1;Parent=gene-LDO38_RS24790;Dbxref=GenBank:WP_006476519.1;Name=WP_006476519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192965.1;locus_tag=LDO38_RS24790;product=hypothetical protein;protein_id=WP_006476519.1;transl_table=11 NZ_CAJZAL010000176.1 RefSeq gene 4835 5320 . + . ID=gene-LDO38_RS24795;Name=LDO38_RS24795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24795;old_locus_tag=BVI2075_710006 NZ_CAJZAL010000176.1 Protein Homology CDS 4835 5320 . + 0 ID=cds-WP_014722708.1;Parent=gene-LDO38_RS24795;Dbxref=GenBank:WP_014722708.1;Name=WP_014722708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757678.1;locus_tag=LDO38_RS24795;product=GNAT family N-acetyltransferase;protein_id=WP_014722708.1;transl_table=11 NZ_CAJZAL010000176.1 RefSeq gene 5433 6908 . - . ID=gene-LDO38_RS24800;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=LDO38_RS24800;old_locus_tag=BVI2075_710007 NZ_CAJZAL010000176.1 Protein Homology CDS 5433 6908 . - 0 ID=cds-WP_011883921.1;Parent=gene-LDO38_RS24800;Dbxref=GenBank:WP_011883921.1;Name=WP_011883921.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476522.1;locus_tag=LDO38_RS24800;product=DNA recombination protein RmuC;protein_id=WP_011883921.1;transl_table=11 NZ_CAJZAL010000176.1 RefSeq gene 6905 7894 . - . ID=gene-LDO38_RS24805;Name=LDO38_RS24805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24805;old_locus_tag=BVI2075_710008 NZ_CAJZAL010000176.1 Protein Homology CDS 6905 7894 . - 0 ID=cds-WP_069246372.1;Parent=gene-LDO38_RS24805;Dbxref=GenBank:WP_069246372.1;Name=WP_069246372.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544923.1;locus_tag=LDO38_RS24805;product=2-hydroxyacid dehydrogenase;protein_id=WP_069246372.1;transl_table=11 NZ_CAJZAL010000176.1 RefSeq gene 7975 9405 . - . ID=gene-LDO38_RS24810;Name=LDO38_RS24810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24810;old_locus_tag=BVI2075_710009 NZ_CAJZAL010000176.1 Protein Homology CDS 7975 9405 . - 0 ID=cds-WP_069246175.1;Parent=gene-LDO38_RS24810;Dbxref=GenBank:WP_069246175.1;Name=WP_069246175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764816.1;locus_tag=LDO38_RS24810;product=sodium:proton antiporter;protein_id=WP_069246175.1;transl_table=11 NZ_CAJZAL010000176.1 RefSeq gene 9449 10111 . - . ID=gene-LDO38_RS24815;Name=LDO38_RS24815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24815;old_locus_tag=BVI2075_710010 NZ_CAJZAL010000176.1 Protein Homology CDS 9449 10111 . - 0 ID=cds-WP_059668787.1;Parent=gene-LDO38_RS24815;Dbxref=GenBank:WP_059668787.1;Name=WP_059668787.1;Ontology_term=GO:0006089;gbkey=CDS;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363387.1;locus_tag=LDO38_RS24815;product=LutC/YkgG family protein;protein_id=WP_059668787.1;transl_table=11 NZ_CAJZAL010000176.1 RefSeq gene 10198 11397 . - . ID=gene-LDO38_RS24820;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=LDO38_RS24820;old_locus_tag=BVI2075_710011 NZ_CAJZAL010000176.1 Protein Homology CDS 10198 11397 . - 0 ID=cds-WP_034194229.1;Parent=gene-LDO38_RS24820;Dbxref=GenBank:WP_034194229.1;Name=WP_034194229.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656325.1;locus_tag=LDO38_RS24820;product=nicotinate phosphoribosyltransferase;protein_id=WP_034194229.1;transl_table=11 NZ_CAJZAL010000176.1 RefSeq gene 11678 12001 . + . ID=gene-LDO38_RS24825;Name=fdxA;gbkey=Gene;gene=fdxA;gene_biotype=protein_coding;locus_tag=LDO38_RS24825;old_locus_tag=BVI2075_710013 NZ_CAJZAL010000176.1 Protein Homology CDS 11678 12001 . + 0 ID=cds-WP_009688972.1;Parent=gene-LDO38_RS24825;Dbxref=GenBank:WP_009688972.1;Name=WP_009688972.1;Ontology_term=GO:0009055,GO:0051539;gbkey=CDS;gene=fdxA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697054.1;locus_tag=LDO38_RS24825;product=ferredoxin FdxA;protein_id=WP_009688972.1;transl_table=11 NZ_CAJZAL010000176.1 RefSeq gene 12105 12180 . + . ID=gene-LDO38_RS24830;Name=LDO38_RS24830;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS24830;old_locus_tag=BVI2075_TRNA21 NZ_CAJZAL010000176.1 tRNAscan-SE tRNA 12105 12180 . + . ID=rna-LDO38_RS24830;Parent=gene-LDO38_RS24830;anticodon=(pos:12138..12140);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS24830;product=tRNA-Asn NZ_CAJZAL010000176.1 tRNAscan-SE exon 12105 12180 . + . ID=exon-LDO38_RS24830-1;Parent=rna-LDO38_RS24830;anticodon=(pos:12138..12140);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS24830;product=tRNA-Asn NZ_CAJZAL010000176.1 RefSeq gene 12255 12330 . + . ID=gene-LDO38_RS24835;Name=LDO38_RS24835;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS24835;old_locus_tag=BVI2075_TRNA22 NZ_CAJZAL010000176.1 tRNAscan-SE tRNA 12255 12330 . + . ID=rna-LDO38_RS24835;Parent=gene-LDO38_RS24835;anticodon=(pos:12288..12290);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS24835;product=tRNA-Asn NZ_CAJZAL010000176.1 tRNAscan-SE exon 12255 12330 . + . ID=exon-LDO38_RS24835-1;Parent=rna-LDO38_RS24835;anticodon=(pos:12288..12290);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS24835;product=tRNA-Asn NZ_CAJZAL010000176.1 RefSeq gene 12438 12923 . + . ID=gene-LDO38_RS24840;Name=LDO38_RS24840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24840;old_locus_tag=BVI2075_710015 NZ_CAJZAL010000176.1 Protein Homology CDS 12438 12923 . + 0 ID=cds-WP_011883909.1;Parent=gene-LDO38_RS24840;Dbxref=GenBank:WP_011883909.1;Name=WP_011883909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656324.1;locus_tag=LDO38_RS24840;product=CreA family protein;protein_id=WP_011883909.1;transl_table=11 NZ_CAJZAL010000176.1 RefSeq gene 12984 13886 . + . ID=gene-LDO38_RS24845;Name=LDO38_RS24845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24845;old_locus_tag=BVI2075_710016 NZ_CAJZAL010000176.1 Protein Homology CDS 12984 13886 . + 0 ID=cds-WP_059568587.1;Parent=gene-LDO38_RS24845;Dbxref=GenBank:WP_059568587.1;Name=WP_059568587.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722701.1;locus_tag=LDO38_RS24845;product=AraC family transcriptional regulator;protein_id=WP_059568587.1;transl_table=11 NZ_CAJZAL010000176.1 RefSeq gene 14177 14950 . + . ID=gene-LDO38_RS24850;Name=LDO38_RS24850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24850;old_locus_tag=BVI2075_710018 NZ_CAJZAL010000176.1 Protein Homology CDS 14177 14950 . + 0 ID=cds-WP_045579332.1;Parent=gene-LDO38_RS24850;Dbxref=GenBank:WP_045579332.1;Name=WP_045579332.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694222.1;locus_tag=LDO38_RS24850;product=AzlC family ABC transporter permease;protein_id=WP_045579332.1;transl_table=11 NZ_CAJZAL010000176.1 RefSeq gene 14947 15285 . + . ID=gene-LDO38_RS24855;Name=LDO38_RS24855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24855;old_locus_tag=BVI2075_710017 NZ_CAJZAL010000176.1 Protein Homology CDS 14947 15285 . + 0 ID=cds-WP_011883902.1;Parent=gene-LDO38_RS24855;Dbxref=GenBank:WP_011883902.1;Name=WP_011883902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897682.1;locus_tag=LDO38_RS24855;product=AzlD domain-containing protein;protein_id=WP_011883902.1;transl_table=11 NZ_CAJZAL010000176.1 RefSeq gene 15444 16214 . + . ID=gene-LDO38_RS24860;Name=LDO38_RS24860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24860;old_locus_tag=BVI2075_710019 NZ_CAJZAL010000176.1 Protein Homology CDS 15444 16214 . + 0 ID=cds-WP_059475864.1;Parent=gene-LDO38_RS24860;Dbxref=GenBank:WP_059475864.1;Name=WP_059475864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897683.1;locus_tag=LDO38_RS24860;product=DUF4088 family protein;protein_id=WP_059475864.1;transl_table=11 NZ_CAJZAL010000176.1 RefSeq gene 16348 16677 . - . ID=gene-LDO38_RS24865;Name=LDO38_RS24865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24865;old_locus_tag=BVI2075_710020 NZ_CAJZAL010000176.1 Protein Homology CDS 16348 16677 . - 0 ID=cds-WP_069246174.1;Parent=gene-LDO38_RS24865;Dbxref=GenBank:WP_069246174.1;Name=WP_069246174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400675.1;locus_tag=LDO38_RS24865;product=hypothetical protein;protein_id=WP_069246174.1;transl_table=11 NZ_CAJZAL010000176.1 RefSeq gene 16938 17156 . + . ID=gene-LDO38_RS24870;Name=LDO38_RS24870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24870 NZ_CAJZAL010000176.1 Protein Homology CDS 16938 17156 . + 0 ID=cds-WP_006753074.1;Parent=gene-LDO38_RS24870;Dbxref=GenBank:WP_006753074.1;Name=WP_006753074.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753074.1;locus_tag=LDO38_RS24870;product=RNA-binding S4 domain-containing protein;protein_id=WP_006753074.1;transl_table=11 NZ_CAJZAL010000176.1 RefSeq gene 17285 18673 . + . ID=gene-LDO38_RS24875;Name=norM;gbkey=Gene;gene=norM;gene_biotype=protein_coding;locus_tag=LDO38_RS24875;old_locus_tag=BVI2075_710022 NZ_CAJZAL010000176.1 Protein Homology CDS 17285 18673 . + 0 ID=cds-WP_011883895.1;Parent=gene-LDO38_RS24875;Dbxref=GenBank:WP_011883895.1;Name=WP_011883895.1;gbkey=CDS;gene=norM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883895.1;locus_tag=LDO38_RS24875;product=multidrug efflux MATE transporter NorM;protein_id=WP_011883895.1;transl_table=11 NZ_CAJZAL010000176.1 RefSeq gene 18831 20225 . + . ID=gene-LDO38_RS24880;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=LDO38_RS24880;old_locus_tag=BVI2075_710023 NZ_CAJZAL010000176.1 Protein Homology CDS 18831 20225 . + 0 ID=cds-WP_014722698.1;Parent=gene-LDO38_RS24880;Dbxref=GenBank:WP_014722698.1;Name=WP_014722698.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532308.1;locus_tag=LDO38_RS24880;product=class II fumarate hydratase;protein_id=WP_014722698.1;transl_table=11 NZ_CAJZAL010000176.1 RefSeq gene 20292 20804 . - . ID=gene-LDO38_RS24885;Name=LDO38_RS24885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24885;old_locus_tag=BVI2075_710024 NZ_CAJZAL010000176.1 Protein Homology CDS 20292 20804 . - 0 ID=cds-WP_011883890.1;Parent=gene-LDO38_RS24885;Dbxref=GenBank:WP_011883890.1;Name=WP_011883890.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400680.1;locus_tag=LDO38_RS24885;product=acyl-CoA thioesterase;protein_id=WP_011883890.1;transl_table=11 NZ_CAJZAL010000176.1 RefSeq gene 21049 21189 . - . ID=gene-LDO38_RS24890;Name=LDO38_RS24890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24890 NZ_CAJZAL010000176.1 Protein Homology CDS 21049 21189 . - 0 ID=cds-WP_164715996.1;Parent=gene-LDO38_RS24890;Dbxref=GenBank:WP_164715996.1;Name=WP_164715996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400681.1;locus_tag=LDO38_RS24890;product=hypothetical protein;protein_id=WP_164715996.1;transl_table=11 NZ_CAJZAL010000176.1 RefSeq gene 21381 22088 . + . ID=gene-LDO38_RS24895;Name=LDO38_RS24895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24895;old_locus_tag=BVI2075_710026 NZ_CAJZAL010000176.1 Protein Homology CDS 21381 22088 . + 0 ID=cds-WP_011883886.1;Parent=gene-LDO38_RS24895;Dbxref=GenBank:WP_011883886.1;Name=WP_011883886.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757661.1;locus_tag=LDO38_RS24895;product=ArsR/SmtB family transcription factor;protein_id=WP_011883886.1;transl_table=11 NZ_CAJZAL010000176.1 RefSeq gene 22251 24393 . + . ID=gene-LDO38_RS24900;Name=LDO38_RS24900;end_range=24393,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24900;partial=true NZ_CAJZAL010000176.1 Protein Homology CDS 22251 24393 . + 0 ID=cds-WP_224056662.1;Parent=gene-LDO38_RS24900;Dbxref=GenBank:WP_224056662.1;Name=WP_224056662.1;end_range=24393,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883885.1;locus_tag=LDO38_RS24900;partial=true;product=DUF6600 domain-containing protein;protein_id=WP_224056662.1;transl_table=11 ##sequence-region NZ_CAJZAL010000177.1 1 25305 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000177.1 RefSeq region 1 25305 . + . ID=NZ_CAJZAL010000177.1:1..25305;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_72 NZ_CAJZAL010000177.1 RefSeq gene 1 554 . + . ID=gene-LDO38_RS24905;Name=LDO38_RS24905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24905;old_locus_tag=BVI2075_720001;partial=true;start_range=.,1 NZ_CAJZAL010000177.1 Protein Homology CDS 1 554 . + 2 ID=cds-WP_224056663.1;Parent=gene-LDO38_RS24905;Dbxref=GenBank:WP_224056663.1;Name=WP_224056663.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495491.1;locus_tag=LDO38_RS24905;partial=true;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_224056663.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000177.1 RefSeq gene 577 1878 . + . ID=gene-LDO38_RS24910;Name=LDO38_RS24910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24910;old_locus_tag=BVI2075_720002 NZ_CAJZAL010000177.1 Protein Homology CDS 577 1878 . + 0 ID=cds-WP_014723796.1;Parent=gene-LDO38_RS24910;Dbxref=GenBank:WP_014723796.1;Name=WP_014723796.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477579.1;locus_tag=LDO38_RS24910;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_014723796.1;transl_table=11 NZ_CAJZAL010000177.1 RefSeq gene 1995 2669 . - . ID=gene-LDO38_RS24915;Name=LDO38_RS24915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24915;old_locus_tag=BVI2075_720004 NZ_CAJZAL010000177.1 Protein Homology CDS 1995 2669 . - 0 ID=cds-WP_011886242.1;Parent=gene-LDO38_RS24915;Dbxref=GenBank:WP_011886242.1;Name=WP_011886242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546399.1;locus_tag=LDO38_RS24915;product=DUF799 domain-containing protein;protein_id=WP_011886242.1;transl_table=11 NZ_CAJZAL010000177.1 RefSeq gene 2680 3135 . - . ID=gene-LDO38_RS24920;Name=LDO38_RS24920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24920;old_locus_tag=BVI2075_720005 NZ_CAJZAL010000177.1 Protein Homology CDS 2680 3135 . - 0 ID=cds-WP_046424077.1;Parent=gene-LDO38_RS24920;Dbxref=GenBank:WP_046424077.1;Name=WP_046424077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329380.1;locus_tag=LDO38_RS24920;product=DUF4810 domain-containing protein;protein_id=WP_046424077.1;transl_table=11 NZ_CAJZAL010000177.1 RefSeq gene 3192 3869 . - . ID=gene-LDO38_RS24925;Name=LDO38_RS24925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24925;old_locus_tag=BVI2075_720006 NZ_CAJZAL010000177.1 Protein Homology CDS 3192 3869 . - 0 ID=cds-WP_435520985.1;Parent=gene-LDO38_RS24925;Dbxref=GenBank:WP_435520985.1;Name=WP_435520985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484289.1;locus_tag=LDO38_RS24925;product=CsgG/HfaB family protein;protein_id=WP_435520985.1;transl_table=11 NZ_CAJZAL010000177.1 RefSeq gene 4483 5838 . - . ID=gene-LDO38_RS24930;Name=gor;gbkey=Gene;gene=gor;gene_biotype=protein_coding;locus_tag=LDO38_RS24930;old_locus_tag=BVI2075_720008 NZ_CAJZAL010000177.1 Protein Homology CDS 4483 5838 . - 0 ID=cds-WP_034192497.1;Parent=gene-LDO38_RS24930;Dbxref=GenBank:WP_034192497.1;Name=WP_034192497.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gor;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495494.1;locus_tag=LDO38_RS24930;product=glutathione-disulfide reductase;protein_id=WP_034192497.1;transl_table=11 NZ_CAJZAL010000177.1 RefSeq gene 6079 6303 . - . ID=gene-LDO38_RS24935;Name=LDO38_RS24935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24935;old_locus_tag=BVI2075_720009 NZ_CAJZAL010000177.1 Protein Homology CDS 6079 6303 . - 0 ID=cds-WP_034192573.1;Parent=gene-LDO38_RS24935;Dbxref=GenBank:WP_034192573.1;Name=WP_034192573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753937.1;locus_tag=LDO38_RS24935;product=hypothetical protein;protein_id=WP_034192573.1;transl_table=11 NZ_CAJZAL010000177.1 RefSeq gene 6638 7759 . - . ID=gene-LDO38_RS24940;Name=LDO38_RS24940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24940;old_locus_tag=BVI2075_720010 NZ_CAJZAL010000177.1 Protein Homology CDS 6638 7759 . - 0 ID=cds-WP_014723803.1;Parent=gene-LDO38_RS24940;Dbxref=GenBank:WP_014723803.1;Name=WP_014723803.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492356.1;locus_tag=LDO38_RS24940;product=porin;protein_id=WP_014723803.1;transl_table=11 NZ_CAJZAL010000177.1 RefSeq gene 8244 8981 . - . ID=gene-LDO38_RS24945;Name=LDO38_RS24945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24945;old_locus_tag=BVI2075_720012;partial=true;start_range=.,8244 NZ_CAJZAL010000177.1 Protein Homology CDS 8244 8981 . - 0 ID=cds-WP_224056664.1;Parent=gene-LDO38_RS24945;Dbxref=GenBank:WP_224056664.1;Name=WP_224056664.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495495.1;locus_tag=LDO38_RS24945;partial=true;product=YoaK family protein;protein_id=WP_224056664.1;start_range=.,8244;transl_table=11 NZ_CAJZAL010000177.1 RefSeq gene 9066 9593 . - . ID=gene-LDO38_RS24950;Name=LDO38_RS24950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24950;old_locus_tag=BVI2075_720013 NZ_CAJZAL010000177.1 Protein Homology CDS 9066 9593 . - 0 ID=cds-WP_011886248.1;Parent=gene-LDO38_RS24950;Dbxref=GenBank:WP_011886248.1;Name=WP_011886248.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546406.1;locus_tag=LDO38_RS24950;product=chromate transporter;protein_id=WP_011886248.1;transl_table=11 NZ_CAJZAL010000177.1 RefSeq gene 9590 10204 . - . ID=gene-LDO38_RS24955;Name=LDO38_RS24955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24955;old_locus_tag=BVI2075_720014 NZ_CAJZAL010000177.1 Protein Homology CDS 9590 10204 . - 0 ID=cds-WP_014723805.1;Parent=gene-LDO38_RS24955;Dbxref=GenBank:WP_014723805.1;Name=WP_014723805.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408019.1;locus_tag=LDO38_RS24955;product=chromate transporter;protein_id=WP_014723805.1;transl_table=11 NZ_CAJZAL010000177.1 RefSeq gene 10301 11185 . + . ID=gene-LDO38_RS24960;Name=LDO38_RS24960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24960;old_locus_tag=BVI2075_720015 NZ_CAJZAL010000177.1 Protein Homology CDS 10301 11185 . + 0 ID=cds-WP_034192495.1;Parent=gene-LDO38_RS24960;Dbxref=GenBank:WP_034192495.1;Name=WP_034192495.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658134.1;locus_tag=LDO38_RS24960;product=transcriptional regulator GcvA;protein_id=WP_034192495.1;transl_table=11 NZ_CAJZAL010000177.1 RefSeq gene 11219 12526 . - . ID=gene-LDO38_RS24965;Name=LDO38_RS24965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24965;old_locus_tag=BVI2075_720016 NZ_CAJZAL010000177.1 Protein Homology CDS 11219 12526 . - 0 ID=cds-WP_059463407.1;Parent=gene-LDO38_RS24965;Dbxref=GenBank:WP_059463407.1;Name=WP_059463407.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004542894.1;locus_tag=LDO38_RS24965;product=solute carrier family 23 protein;protein_id=WP_059463407.1;transl_table=11 NZ_CAJZAL010000177.1 RefSeq gene 12787 14028 . - . ID=gene-LDO38_RS24970;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=LDO38_RS24970;old_locus_tag=BVI2075_720018 NZ_CAJZAL010000177.1 Protein Homology CDS 12787 14028 . - 0 ID=cds-WP_011886252.1;Parent=gene-LDO38_RS24970;Dbxref=GenBank:WP_011886252.1;Name=WP_011886252.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523038.1;locus_tag=LDO38_RS24970;product=flagellar hook-associated protein FlgL;protein_id=WP_011886252.1;transl_table=11 NZ_CAJZAL010000177.1 RefSeq gene 14051 16018 . - . ID=gene-LDO38_RS24975;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=LDO38_RS24975;old_locus_tag=BVI2075_720019 NZ_CAJZAL010000177.1 Protein Homology CDS 14051 16018 . - 0 ID=cds-WP_212183943.1;Parent=gene-LDO38_RS24975;Dbxref=GenBank:WP_212183943.1;Name=WP_212183943.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601449.1;locus_tag=LDO38_RS24975;product=flagellar hook-associated protein FlgK;protein_id=WP_212183943.1;transl_table=11 NZ_CAJZAL010000177.1 RefSeq gene 16155 16910 . - . ID=gene-LDO38_RS24980;Name=LDO38_RS24980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24980;old_locus_tag=BVI2075_720020 NZ_CAJZAL010000177.1 Protein Homology CDS 16155 16910 . - 0 ID=cds-WP_043291559.1;Parent=gene-LDO38_RS24980;Dbxref=GenBank:WP_043291559.1;Name=WP_043291559.1;Ontology_term=GO:0035438;gbkey=CDS;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024243.1;locus_tag=LDO38_RS24980;product=flagellar brake protein;protein_id=WP_043291559.1;transl_table=11 NZ_CAJZAL010000177.1 RefSeq gene 17142 18131 . - . ID=gene-LDO38_RS24985;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=LDO38_RS24985;old_locus_tag=BVI2075_720023 NZ_CAJZAL010000177.1 Protein Homology CDS 17142 18131 . - 0 ID=cds-WP_011886255.1;Parent=gene-LDO38_RS24985;Dbxref=GenBank:WP_011886255.1;Name=WP_011886255.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402764.1;locus_tag=LDO38_RS24985;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_011886255.1;transl_table=11 NZ_CAJZAL010000177.1 RefSeq gene 18131 19303 . - . ID=gene-LDO38_RS24990;Name=LDO38_RS24990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS24990;old_locus_tag=BVI2075_720024 NZ_CAJZAL010000177.1 Protein Homology CDS 18131 19303 . - 0 ID=cds-WP_034192572.1;Parent=gene-LDO38_RS24990;Dbxref=GenBank:WP_034192572.1;Name=WP_034192572.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546412.1;locus_tag=LDO38_RS24990;product=flagellar basal body P-ring protein FlgI;protein_id=WP_034192572.1;transl_table=11 NZ_CAJZAL010000177.1 RefSeq gene 19309 19998 . - . ID=gene-LDO38_RS24995;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=LDO38_RS24995;old_locus_tag=BVI2075_720025 NZ_CAJZAL010000177.1 Protein Homology CDS 19309 19998 . - 0 ID=cds-WP_011886257.1;Parent=gene-LDO38_RS24995;Dbxref=GenBank:WP_011886257.1;Name=WP_011886257.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495504.1;locus_tag=LDO38_RS24995;product=flagellar basal body L-ring protein FlgH;protein_id=WP_011886257.1;transl_table=11 NZ_CAJZAL010000177.1 RefSeq gene 20019 20807 . - . ID=gene-LDO38_RS25000;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=LDO38_RS25000;old_locus_tag=BVI2075_720026 NZ_CAJZAL010000177.1 Protein Homology CDS 20019 20807 . - 0 ID=cds-WP_011886258.1;Parent=gene-LDO38_RS25000;Dbxref=GenBank:WP_011886258.1;Name=WP_011886258.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895799.1;locus_tag=LDO38_RS25000;product=flagellar basal-body rod protein FlgG;protein_id=WP_011886258.1;transl_table=11 NZ_CAJZAL010000177.1 RefSeq gene 20843 21601 . - . ID=gene-LDO38_RS25005;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=LDO38_RS25005;old_locus_tag=BVI2075_720027 NZ_CAJZAL010000177.1 Protein Homology CDS 20843 21601 . - 0 ID=cds-WP_011886259.1;Parent=gene-LDO38_RS25005;Dbxref=GenBank:WP_011886259.1;Name=WP_011886259.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgF;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010112969.1;locus_tag=LDO38_RS25005;product=flagellar basal-body rod protein FlgF;protein_id=WP_011886259.1;transl_table=11 NZ_CAJZAL010000177.1 RefSeq gene 21622 22863 . - . ID=gene-LDO38_RS25010;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=LDO38_RS25010;old_locus_tag=BVI2075_720028 NZ_CAJZAL010000177.1 Protein Homology CDS 21622 22863 . - 0 ID=cds-WP_014723814.1;Parent=gene-LDO38_RS25010;Dbxref=GenBank:WP_014723814.1;Name=WP_014723814.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763175.1;locus_tag=LDO38_RS25010;product=flagellar hook protein FlgE;protein_id=WP_014723814.1;transl_table=11 NZ_CAJZAL010000177.1 RefSeq gene 22892 23638 . - . ID=gene-LDO38_RS25015;Name=LDO38_RS25015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25015;old_locus_tag=BVI2075_720029 NZ_CAJZAL010000177.1 Protein Homology CDS 22892 23638 . - 0 ID=cds-WP_011886261.1;Parent=gene-LDO38_RS25015;Dbxref=GenBank:WP_011886261.1;Name=WP_011886261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895796.1;locus_tag=LDO38_RS25015;product=flagellar hook assembly protein FlgD;protein_id=WP_011886261.1;transl_table=11 NZ_CAJZAL010000177.1 RefSeq gene 23695 24120 . - . ID=gene-LDO38_RS25020;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=LDO38_RS25020;old_locus_tag=BVI2075_720030 NZ_CAJZAL010000177.1 Protein Homology CDS 23695 24120 . - 0 ID=cds-WP_011886262.1;Parent=gene-LDO38_RS25020;Dbxref=GenBank:WP_011886262.1;Name=WP_011886262.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402757.1;locus_tag=LDO38_RS25020;product=flagellar basal body rod protein FlgC;protein_id=WP_011886262.1;transl_table=11 NZ_CAJZAL010000177.1 RefSeq gene 24161 24649 . - . ID=gene-LDO38_RS25025;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=LDO38_RS25025;old_locus_tag=BVI2075_720031 NZ_CAJZAL010000177.1 Protein Homology CDS 24161 24649 . - 0 ID=cds-WP_011886263.1;Parent=gene-LDO38_RS25025;Dbxref=GenBank:WP_011886263.1;Name=WP_011886263.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353471.1;locus_tag=LDO38_RS25025;product=flagellar basal body rod protein FlgB;protein_id=WP_011886263.1;transl_table=11 NZ_CAJZAL010000177.1 RefSeq pseudogene 25002 25305 . + . ID=gene-LDO38_RS25030;Name=LDO38_RS25030;end_range=25305,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS25030;partial=true;pseudo=true NZ_CAJZAL010000177.1 Protein Homology CDS 25002 25305 . + 0 ID=cds-LDO38_RS25030;Parent=gene-LDO38_RS25030;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=25305,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658144.1;locus_tag=LDO38_RS25030;partial=true;product=flagellar basal body P-ring formation chaperone FlgA;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000178.1 1 49027 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000178.1 RefSeq region 1 49027 . + . ID=NZ_CAJZAL010000178.1:1..49027;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_73 NZ_CAJZAL010000178.1 RefSeq gene 1 1665 . - . ID=gene-LDO38_RS25035;Name=LDO38_RS25035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25035;partial=true;start_range=.,1 NZ_CAJZAL010000178.1 Protein Homology CDS 1 1665 . - 0 ID=cds-WP_224056666.1;Parent=gene-LDO38_RS25035;Dbxref=GenBank:WP_224056666.1;Name=WP_224056666.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490501.1;locus_tag=LDO38_RS25035;partial=true;product=flavin-containing monooxygenase;protein_id=WP_224056666.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000178.1 RefSeq gene 1652 3361 . - . ID=gene-LDO38_RS25040;Name=LDO38_RS25040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25040;old_locus_tag=BVI2075_730002 NZ_CAJZAL010000178.1 Protein Homology CDS 1652 3361 . - 0 ID=cds-WP_224056667.1;Parent=gene-LDO38_RS25040;Dbxref=GenBank:WP_224056667.1;Name=WP_224056667.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725969.1;locus_tag=LDO38_RS25040;product=GMC family oxidoreductase;protein_id=WP_224056667.1;transl_table=11 NZ_CAJZAL010000178.1 RefSeq gene 3387 4808 . - . ID=gene-LDO38_RS25045;Name=LDO38_RS25045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25045;old_locus_tag=BVI2075_730003 NZ_CAJZAL010000178.1 Protein Homology CDS 3387 4808 . - 0 ID=cds-WP_176154187.1;Parent=gene-LDO38_RS25045;Dbxref=GenBank:WP_176154187.1;Name=WP_176154187.1;Ontology_term=GO:0006081,GO:0050269;gbkey=CDS;go_function=coniferyl-aldehyde dehydrogenase [NAD(P)+] activity|0050269||IEA;go_process=aldehyde metabolic process|0006081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880326.1;locus_tag=LDO38_RS25045;product=coniferyl aldehyde dehydrogenase;protein_id=WP_176154187.1;transl_table=11 NZ_CAJZAL010000178.1 RefSeq gene 4950 5984 . + . ID=gene-LDO38_RS25050;Name=LDO38_RS25050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25050;old_locus_tag=BVI2075_730004 NZ_CAJZAL010000178.1 Protein Homology CDS 4950 5984 . + 0 ID=cds-WP_034193907.1;Parent=gene-LDO38_RS25050;Dbxref=GenBank:WP_034193907.1;Name=WP_034193907.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725967.1;locus_tag=LDO38_RS25050;product=AraC family transcriptional regulator;protein_id=WP_034193907.1;transl_table=11 NZ_CAJZAL010000178.1 RefSeq gene 6308 6574 . - . ID=gene-LDO38_RS25055;Name=LDO38_RS25055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25055;old_locus_tag=BVI2075_730005 NZ_CAJZAL010000178.1 Protein Homology CDS 6308 6574 . - 0 ID=cds-WP_034193906.1;Parent=gene-LDO38_RS25055;Dbxref=GenBank:WP_034193906.1;Name=WP_034193906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492764.1;locus_tag=LDO38_RS25055;product=XapX domain-containing protein;protein_id=WP_034193906.1;transl_table=11 NZ_CAJZAL010000178.1 RefSeq gene 6882 7568 . + . ID=gene-LDO38_RS25060;Name=LDO38_RS25060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25060;old_locus_tag=BVI2075_730006 NZ_CAJZAL010000178.1 Protein Homology CDS 6882 7568 . + 0 ID=cds-WP_014725964.1;Parent=gene-LDO38_RS25060;Dbxref=GenBank:WP_014725964.1;Name=WP_014725964.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337464.1;locus_tag=LDO38_RS25060;product=hydrolase;protein_id=WP_014725964.1;transl_table=11 NZ_CAJZAL010000178.1 RefSeq gene 7734 7901 . + . ID=gene-LDO38_RS25065;Name=LDO38_RS25065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25065;old_locus_tag=BVI2075_730007 NZ_CAJZAL010000178.1 Protein Homology CDS 7734 7901 . + 0 ID=cds-WP_014725963.1;Parent=gene-LDO38_RS25065;Dbxref=GenBank:WP_014725963.1;Name=WP_014725963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725963.1;locus_tag=LDO38_RS25065;product=DUF1427 family protein;protein_id=WP_014725963.1;transl_table=11 NZ_CAJZAL010000178.1 RefSeq gene 7921 9810 . + . ID=gene-LDO38_RS25070;Name=LDO38_RS25070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25070;old_locus_tag=BVI2075_730008 NZ_CAJZAL010000178.1 Protein Homology CDS 7921 9810 . + 0 ID=cds-WP_224056668.1;Parent=gene-LDO38_RS25070;Dbxref=GenBank:WP_224056668.1;Name=WP_224056668.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482680.1;locus_tag=LDO38_RS25070;product=amidohydrolase;protein_id=WP_224056668.1;transl_table=11 NZ_CAJZAL010000178.1 RefSeq gene 9812 10264 . + . ID=gene-LDO38_RS25075;Name=LDO38_RS25075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25075;old_locus_tag=BVI2075_730009 NZ_CAJZAL010000178.1 Protein Homology CDS 9812 10264 . + 0 ID=cds-WP_046428113.1;Parent=gene-LDO38_RS25075;Dbxref=GenBank:WP_046428113.1;Name=WP_046428113.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725961.1;locus_tag=LDO38_RS25075;product=DoxX family protein;protein_id=WP_046428113.1;transl_table=11 NZ_CAJZAL010000178.1 RefSeq gene 10287 10652 . + . ID=gene-LDO38_RS25080;Name=LDO38_RS25080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25080 NZ_CAJZAL010000178.1 GeneMarkS-2+ CDS 10287 10652 . + 0 ID=cds-WP_059463975.1;Parent=gene-LDO38_RS25080;Dbxref=GenBank:WP_059463975.1;Name=WP_059463975.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS25080;product=hypothetical protein;protein_id=WP_059463975.1;transl_table=11 NZ_CAJZAL010000178.1 RefSeq gene 10895 12640 . - . ID=gene-LDO38_RS25085;Name=LDO38_RS25085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25085;old_locus_tag=BVI2075_730011 NZ_CAJZAL010000178.1 Protein Homology CDS 10895 12640 . - 0 ID=cds-WP_224056669.1;Parent=gene-LDO38_RS25085;Dbxref=GenBank:WP_224056669.1;Name=WP_224056669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661335.1;locus_tag=LDO38_RS25085;product=cholesterol oxidase substrate-binding domain-containing protein;protein_id=WP_224056669.1;transl_table=11 NZ_CAJZAL010000178.1 RefSeq gene 12958 13335 . - . ID=gene-LDO38_RS30655;Name=LDO38_RS30655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30655 NZ_CAJZAL010000178.1 GeneMarkS-2+ CDS 12958 13335 . - 0 ID=cds-WP_435520986.1;Parent=gene-LDO38_RS30655;Dbxref=GenBank:WP_435520986.1;Name=WP_435520986.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30655;product=hypothetical protein;protein_id=WP_435520986.1;transl_table=11 NZ_CAJZAL010000178.1 RefSeq gene 13817 14620 . + . ID=gene-LDO38_RS25090;Name=LDO38_RS25090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25090;old_locus_tag=BVI2075_730014 NZ_CAJZAL010000178.1 Protein Homology CDS 13817 14620 . + 0 ID=cds-WP_224056670.1;Parent=gene-LDO38_RS25090;Dbxref=GenBank:WP_224056670.1;Name=WP_224056670.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725956.1;locus_tag=LDO38_RS25090;product=helix-turn-helix transcriptional regulator;protein_id=WP_224056670.1;transl_table=11 NZ_CAJZAL010000178.1 RefSeq gene 14927 15811 . - . ID=gene-LDO38_RS25095;Name=LDO38_RS25095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25095;old_locus_tag=BVI2075_730015 NZ_CAJZAL010000178.1 Protein Homology CDS 14927 15811 . - 0 ID=cds-WP_059562239.1;Parent=gene-LDO38_RS25095;Dbxref=GenBank:WP_059562239.1;Name=WP_059562239.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661338.1;locus_tag=LDO38_RS25095;product=helix-turn-helix transcriptional regulator;protein_id=WP_059562239.1;transl_table=11 NZ_CAJZAL010000178.1 RefSeq gene 15958 17661 . - . ID=gene-LDO38_RS25100;Name=LDO38_RS25100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25100;old_locus_tag=BVI2075_730016 NZ_CAJZAL010000178.1 Protein Homology CDS 15958 17661 . - 0 ID=cds-WP_224056671.1;Parent=gene-LDO38_RS25100;Dbxref=GenBank:WP_224056671.1;Name=WP_224056671.1;Ontology_term=GO:0015833,GO:0005524,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758501.1;locus_tag=LDO38_RS25100;product=cyclic peptide export ABC transporter;protein_id=WP_224056671.1;transl_table=11 NZ_CAJZAL010000178.1 RefSeq gene 17677 18156 . - . ID=gene-LDO38_RS25105;Name=LDO38_RS25105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25105;old_locus_tag=BVI2075_730017 NZ_CAJZAL010000178.1 Protein Homology CDS 17677 18156 . - 0 ID=cds-WP_224019696.1;Parent=gene-LDO38_RS25105;Dbxref=GenBank:WP_224019696.1;Name=WP_224019696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725952.1;locus_tag=LDO38_RS25105;product=hypothetical protein;protein_id=WP_224019696.1;transl_table=11 NZ_CAJZAL010000178.1 RefSeq gene 18209 18865 . - . ID=gene-LDO38_RS25110;Name=LDO38_RS25110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25110;old_locus_tag=BVI2075_730018 NZ_CAJZAL010000178.1 Protein Homology CDS 18209 18865 . - 0 ID=cds-WP_046428098.1;Parent=gene-LDO38_RS25110;Dbxref=GenBank:WP_046428098.1;Name=WP_046428098.1;Ontology_term=GO:1901271;gbkey=CDS;go_process=lipooligosaccharide biosynthetic process|1901271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332183.1;locus_tag=LDO38_RS25110;product=glycosyltransferase family 25 protein;protein_id=WP_046428098.1;transl_table=11 NZ_CAJZAL010000178.1 RefSeq gene 18862 28371 . - . ID=gene-LDO38_RS25115;Name=LDO38_RS25115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25115;old_locus_tag=BVI2075_730019 NZ_CAJZAL010000178.1 Protein Homology CDS 18862 28371 . - 0 ID=cds-WP_224056672.1;Parent=gene-LDO38_RS25115;Dbxref=GenBank:WP_224056672.1;Name=WP_224056672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725950.1;locus_tag=LDO38_RS25115;product=amino acid adenylation domain-containing protein;protein_id=WP_224056672.1;transl_table=11 NZ_CAJZAL010000178.1 RefSeq gene 28459 37563 . - . ID=gene-LDO38_RS25120;Name=LDO38_RS25120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25120;old_locus_tag=BVI2075_730020 NZ_CAJZAL010000178.1 Protein Homology CDS 28459 37563 . - 0 ID=cds-WP_224056673.1;Parent=gene-LDO38_RS25120;Dbxref=GenBank:WP_224056673.1;Name=WP_224056673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753160.1;locus_tag=LDO38_RS25120;product=non-ribosomal peptide synthetase;protein_id=WP_224056673.1;transl_table=11 NZ_CAJZAL010000178.1 RefSeq gene 37560 41489 . - . ID=gene-LDO38_RS25125;Name=LDO38_RS25125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25125;old_locus_tag=BVI2075_730021 NZ_CAJZAL010000178.1 Protein Homology CDS 37560 41489 . - 0 ID=cds-WP_224056674.1;Parent=gene-LDO38_RS25125;Dbxref=GenBank:WP_224056674.1;Name=WP_224056674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332180.1;locus_tag=LDO38_RS25125;product=non-ribosomal peptide synthetase;protein_id=WP_224056674.1;transl_table=11 NZ_CAJZAL010000178.1 RefSeq gene 41477 43093 . - . ID=gene-LDO38_RS25130;Name=LDO38_RS25130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25130;old_locus_tag=BVI2075_730022 NZ_CAJZAL010000178.1 Protein Homology CDS 41477 43093 . - 0 ID=cds-WP_224056675.1;Parent=gene-LDO38_RS25130;Dbxref=GenBank:WP_224056675.1;Name=WP_224056675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332179.1;locus_tag=LDO38_RS25130;product=MBL fold metallo-hydrolase;protein_id=WP_224056675.1;transl_table=11 NZ_CAJZAL010000178.1 RefSeq gene 43104 49027 . - . ID=gene-LDO38_RS25135;Name=LDO38_RS25135;end_range=49027,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25135;old_locus_tag=BVI2075_730023;partial=true NZ_CAJZAL010000178.1 Protein Homology CDS 43104 49027 . - 2 ID=cds-WP_435520987.1;Parent=gene-LDO38_RS25135;Dbxref=GenBank:WP_435520987.1;Name=WP_435520987.1;end_range=49027,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725946.1;locus_tag=LDO38_RS25135;partial=true;product=amino acid adenylation domain-containing protein;protein_id=WP_435520987.1;transl_table=11 ##sequence-region NZ_CAJZAL010000179.1 1 48717 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000179.1 RefSeq region 1 48717 . + . ID=NZ_CAJZAL010000179.1:1..48717;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_74 NZ_CAJZAL010000179.1 RefSeq gene 1 193 . - . ID=gene-LDO38_RS25140;Name=LDO38_RS25140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25140;partial=true;start_range=.,1 NZ_CAJZAL010000179.1 Protein Homology CDS 1 193 . - 0 ID=cds-WP_224056677.1;Parent=gene-LDO38_RS25140;Dbxref=GenBank:WP_224056677.1;Name=WP_224056677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896487.1;locus_tag=LDO38_RS25140;partial=true;product=DUF3619 family protein;protein_id=WP_224056677.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 190 753 . - . ID=gene-LDO38_RS25145;Name=LDO38_RS25145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25145;old_locus_tag=BVI2075_740001 NZ_CAJZAL010000179.1 Protein Homology CDS 190 753 . - 0 ID=cds-WP_011885548.1;Parent=gene-LDO38_RS25145;Dbxref=GenBank:WP_011885548.1;Name=WP_011885548.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011487480.1;locus_tag=LDO38_RS25145;product=RNA polymerase sigma factor;protein_id=WP_011885548.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 1106 2869 . + . ID=gene-LDO38_RS25150;Name=LDO38_RS25150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25150;old_locus_tag=BVI2075_740003 NZ_CAJZAL010000179.1 Protein Homology CDS 1106 2869 . + 0 ID=cds-WP_014723366.1;Parent=gene-LDO38_RS25150;Dbxref=GenBank:WP_014723366.1;Name=WP_014723366.1;Ontology_term=GO:0009082,GO:0003984;gbkey=CDS;go_function=acetolactate synthase activity|0003984||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185769.1;locus_tag=LDO38_RS25150;product=acetolactate synthase 3 catalytic subunit;protein_id=WP_014723366.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 2981 3472 . + . ID=gene-LDO38_RS25155;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=LDO38_RS25155;old_locus_tag=BVI2075_740004 NZ_CAJZAL010000179.1 Protein Homology CDS 2981 3472 . + 0 ID=cds-WP_006750445.1;Parent=gene-LDO38_RS25155;Dbxref=GenBank:WP_006750445.1;Name=WP_006750445.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004630835.1;locus_tag=LDO38_RS25155;product=acetolactate synthase small subunit;protein_id=WP_006750445.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 3578 4594 . + . ID=gene-LDO38_RS25160;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=LDO38_RS25160;old_locus_tag=BVI2075_740005 NZ_CAJZAL010000179.1 Protein Homology CDS 3578 4594 . + 0 ID=cds-WP_006478252.1;Parent=gene-LDO38_RS25160;Dbxref=GenBank:WP_006478252.1;Name=WP_006478252.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011902902.1;locus_tag=LDO38_RS25160;product=ketol-acid reductoisomerase;protein_id=WP_006478252.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 4722 5366 . + . ID=gene-LDO38_RS25165;Name=LDO38_RS25165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25165;old_locus_tag=BVI2075_740006 NZ_CAJZAL010000179.1 Protein Homology CDS 4722 5366 . + 0 ID=cds-WP_011885546.1;Parent=gene-LDO38_RS25165;Dbxref=GenBank:WP_011885546.1;Name=WP_011885546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331633.1;locus_tag=LDO38_RS25165;product=phosphatidylserine decarboxylase;protein_id=WP_011885546.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 5382 6254 . + . ID=gene-LDO38_RS25170;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=LDO38_RS25170;old_locus_tag=BVI2075_740007 NZ_CAJZAL010000179.1 Protein Homology CDS 5382 6254 . + 0 ID=cds-WP_011885545.1;Parent=gene-LDO38_RS25170;Dbxref=GenBank:WP_011885545.1;Name=WP_011885545.1;Ontology_term=GO:0008654,GO:0003882;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-serine O-phosphatidyltransferase activity|0003882||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186682.1;locus_tag=LDO38_RS25170;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_011885545.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 6576 8120 . + . ID=gene-LDO38_RS25175;Name=LDO38_RS25175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25175;old_locus_tag=BVI2075_740008 NZ_CAJZAL010000179.1 Protein Homology CDS 6576 8120 . + 0 ID=cds-WP_045578922.1;Parent=gene-LDO38_RS25175;Dbxref=GenBank:WP_045578922.1;Name=WP_045578922.1;Ontology_term=GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398785.1;locus_tag=LDO38_RS25175;product=2-isopropylmalate synthase;protein_id=WP_045578922.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 8193 9743 . - . ID=gene-LDO38_RS25180;Name=LDO38_RS25180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25180;old_locus_tag=BVI2075_740009 NZ_CAJZAL010000179.1 Protein Homology CDS 8193 9743 . - 0 ID=cds-WP_069246281.1;Parent=gene-LDO38_RS25180;Dbxref=GenBank:WP_069246281.1;Name=WP_069246281.1;Ontology_term=GO:0015103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=inorganic anion transmembrane transporter activity|0015103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723364.1;locus_tag=LDO38_RS25180;product=SulP family inorganic anion transporter;protein_id=WP_069246281.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 9782 10426 . - . ID=gene-LDO38_RS25185;Name=LDO38_RS25185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25185;old_locus_tag=BVI2075_740010 NZ_CAJZAL010000179.1 Protein Homology CDS 9782 10426 . - 0 ID=cds-WP_014723363.1;Parent=gene-LDO38_RS25185;Dbxref=GenBank:WP_014723363.1;Name=WP_014723363.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415554.1;locus_tag=LDO38_RS25185;product=carbonic anhydrase;protein_id=WP_014723363.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 10811 11323 . - . ID=gene-LDO38_RS25190;Name=LDO38_RS25190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25190;old_locus_tag=BVI2075_740011 NZ_CAJZAL010000179.1 Protein Homology CDS 10811 11323 . - 0 ID=cds-WP_011885541.1;Parent=gene-LDO38_RS25190;Dbxref=GenBank:WP_011885541.1;Name=WP_011885541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405570.1;locus_tag=LDO38_RS25190;product=hypothetical protein;protein_id=WP_011885541.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 11504 12763 . + . ID=gene-LDO38_RS25195;Name=LDO38_RS25195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25195;old_locus_tag=BVI2075_740012 NZ_CAJZAL010000179.1 Protein Homology CDS 11504 12763 . + 0 ID=cds-WP_011885540.1;Parent=gene-LDO38_RS25195;Dbxref=GenBank:WP_011885540.1;Name=WP_011885540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478259.1;locus_tag=LDO38_RS25195;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_011885540.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 12882 13151 . + . ID=gene-LDO38_RS25200;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=LDO38_RS25200;old_locus_tag=BVI2075_740013 NZ_CAJZAL010000179.1 Protein Homology CDS 12882 13151 . + 0 ID=cds-WP_006398792.1;Parent=gene-LDO38_RS25200;Dbxref=GenBank:WP_006398792.1;Name=WP_006398792.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401401.1;locus_tag=LDO38_RS25200;product=30S ribosomal protein S15;protein_id=WP_006398792.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 13443 15590 . + . ID=gene-LDO38_RS25205;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=LDO38_RS25205;old_locus_tag=BVI2075_740014 NZ_CAJZAL010000179.1 Protein Homology CDS 13443 15590 . + 0 ID=cds-WP_224056678.1;Parent=gene-LDO38_RS25205;Dbxref=GenBank:WP_224056678.1;Name=WP_224056678.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410113.1;locus_tag=LDO38_RS25205;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_224056678.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 15741 16760 . + . ID=gene-LDO38_RS25210;Name=LDO38_RS25210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25210;old_locus_tag=BVI2075_740015 NZ_CAJZAL010000179.1 Protein Homology CDS 15741 16760 . + 0 ID=cds-WP_059474986.1;Parent=gene-LDO38_RS25210;Dbxref=GenBank:WP_059474986.1;Name=WP_059474986.1;Ontology_term=GO:0003960,GO:0048038,GO:0070402;gbkey=CDS;go_function=NADPH:quinone reductase activity|0003960||IEA,quinone binding|0048038||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600129.1;locus_tag=LDO38_RS25210;product=NAD(P)H-quinone oxidoreductase;protein_id=WP_059474986.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 16902 17657 . + . ID=gene-LDO38_RS25215;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=LDO38_RS25215;old_locus_tag=BVI2075_740016 NZ_CAJZAL010000179.1 Protein Homology CDS 16902 17657 . + 0 ID=cds-WP_014723359.1;Parent=gene-LDO38_RS25215;Dbxref=GenBank:WP_014723359.1;Name=WP_014723359.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657484.1;locus_tag=LDO38_RS25215;product=triose-phosphate isomerase;protein_id=WP_014723359.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 17730 18116 . + . ID=gene-LDO38_RS25220;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=LDO38_RS25220;old_locus_tag=BVI2075_740018 NZ_CAJZAL010000179.1 Protein Homology CDS 17730 18116 . + 0 ID=cds-WP_011885536.1;Parent=gene-LDO38_RS25220;Dbxref=GenBank:WP_011885536.1;Name=WP_011885536.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545815.1;locus_tag=LDO38_RS25220;product=preprotein translocase subunit SecG;protein_id=WP_011885536.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 18228 18312 . + . ID=gene-LDO38_RS25225;Name=LDO38_RS25225;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS25225;old_locus_tag=BVI2075_TRNA23 NZ_CAJZAL010000179.1 tRNAscan-SE tRNA 18228 18312 . + . ID=rna-LDO38_RS25225;Parent=gene-LDO38_RS25225;anticodon=(pos:18262..18264);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS25225;product=tRNA-Leu NZ_CAJZAL010000179.1 tRNAscan-SE exon 18228 18312 . + . ID=exon-LDO38_RS25225-1;Parent=rna-LDO38_RS25225;anticodon=(pos:18262..18264);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS25225;product=tRNA-Leu NZ_CAJZAL010000179.1 RefSeq gene 18467 18826 . + . ID=gene-LDO38_RS25230;Name=LDO38_RS25230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25230;old_locus_tag=BVI2075_740019 NZ_CAJZAL010000179.1 Protein Homology CDS 18467 18826 . + 0 ID=cds-WP_011885535.1;Parent=gene-LDO38_RS25230;Dbxref=GenBank:WP_011885535.1;Name=WP_011885535.1;Ontology_term=GO:0016655,GO:0048038,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013339872.1;locus_tag=LDO38_RS25230;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_011885535.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 18890 19369 . + . ID=gene-LDO38_RS25235;Name=LDO38_RS25235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25235;old_locus_tag=BVI2075_740020 NZ_CAJZAL010000179.1 Protein Homology CDS 18890 19369 . + 0 ID=cds-WP_006398799.1;Parent=gene-LDO38_RS25235;Dbxref=GenBank:WP_006398799.1;Name=WP_006398799.1;Ontology_term=GO:0008137,GO:0016655,GO:0048038,GO:0051539,GO:0005886,GO:0045271;gbkey=CDS;go_component=plasma membrane|0005886||IEA,respiratory chain complex I|0045271||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186402.1;locus_tag=LDO38_RS25235;product=NuoB/complex I 20 kDa subunit family protein;protein_id=WP_006398799.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 19391 19993 . + . ID=gene-LDO38_RS25240;Name=LDO38_RS25240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25240;old_locus_tag=BVI2075_740021 NZ_CAJZAL010000179.1 Protein Homology CDS 19391 19993 . + 0 ID=cds-WP_011885534.1;Parent=gene-LDO38_RS25240;Dbxref=GenBank:WP_011885534.1;Name=WP_011885534.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018442918.1;locus_tag=LDO38_RS25240;product=NADH-quinone oxidoreductase subunit C;protein_id=WP_011885534.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 20003 21256 . + . ID=gene-LDO38_RS25245;Name=LDO38_RS25245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25245;old_locus_tag=BVI2075_740022 NZ_CAJZAL010000179.1 Protein Homology CDS 20003 21256 . + 0 ID=cds-WP_011885533.1;Parent=gene-LDO38_RS25245;Dbxref=GenBank:WP_011885533.1;Name=WP_011885533.1;Ontology_term=GO:0016651,GO:0048038,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,quinone binding|0048038||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014191758.1;locus_tag=LDO38_RS25245;product=NADH-quinone oxidoreductase subunit D;protein_id=WP_011885533.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 21437 21922 . + . ID=gene-LDO38_RS25250;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=LDO38_RS25250;old_locus_tag=BVI2075_740023 NZ_CAJZAL010000179.1 Protein Homology CDS 21437 21922 . + 0 ID=cds-WP_006478266.1;Parent=gene-LDO38_RS25250;Dbxref=GenBank:WP_006478266.1;Name=WP_006478266.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401393.1;locus_tag=LDO38_RS25250;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_006478266.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 21919 23229 . + . ID=gene-LDO38_RS25255;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=LDO38_RS25255;old_locus_tag=BVI2075_740024 NZ_CAJZAL010000179.1 Protein Homology CDS 21919 23229 . + 0 ID=cds-WP_059623202.1;Parent=gene-LDO38_RS25255;Dbxref=GenBank:WP_059623202.1;Name=WP_059623202.1;Ontology_term=GO:0010181,GO:0050136,GO:0051287,GO:0051539;gbkey=CDS;gene=nuoF;go_function=FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896505.1;locus_tag=LDO38_RS25255;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_059623202.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 23314 25644 . + . ID=gene-LDO38_RS25260;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=LDO38_RS25260;old_locus_tag=BVI2075_740025 NZ_CAJZAL010000179.1 Protein Homology CDS 23314 25644 . + 0 ID=cds-WP_069246280.1;Parent=gene-LDO38_RS25260;Dbxref=GenBank:WP_069246280.1;Name=WP_069246280.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213012.1;locus_tag=LDO38_RS25260;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_069246280.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 25645 26712 . + . ID=gene-LDO38_RS25265;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=LDO38_RS25265;old_locus_tag=BVI2075_740026 NZ_CAJZAL010000179.1 Protein Homology CDS 25645 26712 . + 0 ID=cds-WP_011885530.1;Parent=gene-LDO38_RS25265;Dbxref=GenBank:WP_011885530.1;Name=WP_011885530.1;Ontology_term=GO:0016020;gbkey=CDS;gene=nuoH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896507.1;locus_tag=LDO38_RS25265;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_011885530.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 26728 27216 . + . ID=gene-LDO38_RS25270;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=LDO38_RS25270;old_locus_tag=BVI2075_740027 NZ_CAJZAL010000179.1 Protein Homology CDS 26728 27216 . + 0 ID=cds-WP_011885529.1;Parent=gene-LDO38_RS25270;Dbxref=GenBank:WP_011885529.1;Name=WP_011885529.1;Ontology_term=GO:0016651,GO:0051539;gbkey=CDS;gene=nuoI;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885529.1;locus_tag=LDO38_RS25270;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_011885529.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 27331 27981 . + . ID=gene-LDO38_RS25275;Name=LDO38_RS25275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25275;old_locus_tag=BVI2075_740028 NZ_CAJZAL010000179.1 Protein Homology CDS 27331 27981 . + 0 ID=cds-WP_011885528.1;Parent=gene-LDO38_RS25275;Dbxref=GenBank:WP_011885528.1;Name=WP_011885528.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885528.1;locus_tag=LDO38_RS25275;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_011885528.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 28000 28305 . + . ID=gene-LDO38_RS25280;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=LDO38_RS25280;old_locus_tag=BVI2075_740029 NZ_CAJZAL010000179.1 Protein Homology CDS 28000 28305 . + 0 ID=cds-WP_011885527.1;Parent=gene-LDO38_RS25280;Dbxref=GenBank:WP_011885527.1;Name=WP_011885527.1;gbkey=CDS;gene=nuoK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007588140.1;locus_tag=LDO38_RS25280;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_011885527.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 28323 30377 . + . ID=gene-LDO38_RS25285;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=LDO38_RS25285;old_locus_tag=BVI2075_740030 NZ_CAJZAL010000179.1 Protein Homology CDS 28323 30377 . + 0 ID=cds-WP_011885526.1;Parent=gene-LDO38_RS25285;Dbxref=GenBank:WP_011885526.1;Name=WP_011885526.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185765.1;locus_tag=LDO38_RS25285;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_011885526.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 30394 31884 . + . ID=gene-LDO38_RS25290;Name=LDO38_RS25290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25290;old_locus_tag=BVI2075_740031 NZ_CAJZAL010000179.1 Protein Homology CDS 30394 31884 . + 0 ID=cds-WP_011885525.1;Parent=gene-LDO38_RS25290;Dbxref=GenBank:WP_011885525.1;Name=WP_011885525.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025113.1;locus_tag=LDO38_RS25290;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_011885525.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 31921 33384 . + . ID=gene-LDO38_RS25295;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=LDO38_RS25295;old_locus_tag=BVI2075_740032 NZ_CAJZAL010000179.1 Protein Homology CDS 31921 33384 . + 0 ID=cds-WP_172820461.1;Parent=gene-LDO38_RS25295;Dbxref=GenBank:WP_172820461.1;Name=WP_172820461.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885524.1;locus_tag=LDO38_RS25295;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_172820461.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 33384 33680 . + . ID=gene-LDO38_RS25300;Name=LDO38_RS25300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25300;old_locus_tag=BVI2075_740033 NZ_CAJZAL010000179.1 Protein Homology CDS 33384 33680 . + 0 ID=cds-WP_059696077.1;Parent=gene-LDO38_RS25300;Dbxref=GenBank:WP_059696077.1;Name=WP_059696077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601582.1;locus_tag=LDO38_RS25300;product=DUF2818 family protein;protein_id=WP_059696077.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 33722 34312 . + . ID=gene-LDO38_RS25305;Name=LDO38_RS25305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25305;old_locus_tag=BVI2075_740034 NZ_CAJZAL010000179.1 Protein Homology CDS 33722 34312 . + 0 ID=cds-WP_011885522.1;Parent=gene-LDO38_RS25305;Dbxref=GenBank:WP_011885522.1;Name=WP_011885522.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908710.1;locus_tag=LDO38_RS25305;product=NUDIX domain-containing protein;protein_id=WP_011885522.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 34448 34876 . + . ID=gene-LDO38_RS25310;Name=LDO38_RS25310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25310;old_locus_tag=BVI2075_740035 NZ_CAJZAL010000179.1 Protein Homology CDS 34448 34876 . + 0 ID=cds-WP_069246279.1;Parent=gene-LDO38_RS25310;Dbxref=GenBank:WP_069246279.1;Name=WP_069246279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185972.1;locus_tag=LDO38_RS25310;product=DUF1178 family protein;protein_id=WP_069246279.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 34932 36128 . + . ID=gene-LDO38_RS25315;Name=LDO38_RS25315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25315;old_locus_tag=BVI2075_740036 NZ_CAJZAL010000179.1 Protein Homology CDS 34932 36128 . + 0 ID=cds-WP_059461894.1;Parent=gene-LDO38_RS25315;Dbxref=GenBank:WP_059461894.1;Name=WP_059461894.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763850.1;locus_tag=LDO38_RS25315;product=acyl-CoA dehydrogenase family protein;protein_id=WP_059461894.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 36148 37281 . + . ID=gene-LDO38_RS25320;Name=LDO38_RS25320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25320;old_locus_tag=BVI2075_740037 NZ_CAJZAL010000179.1 Protein Homology CDS 36148 37281 . + 0 ID=cds-WP_069246278.1;Parent=gene-LDO38_RS25320;Dbxref=GenBank:WP_069246278.1;Name=WP_069246278.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723352.1;locus_tag=LDO38_RS25320;product=acyl-CoA dehydrogenase family protein;protein_id=WP_069246278.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 37316 37777 . + . ID=gene-LDO38_RS25325;Name=LDO38_RS25325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25325;old_locus_tag=BVI2075_740038 NZ_CAJZAL010000179.1 Protein Homology CDS 37316 37777 . + 0 ID=cds-WP_069246277.1;Parent=gene-LDO38_RS25325;Dbxref=GenBank:WP_069246277.1;Name=WP_069246277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364310.1;locus_tag=LDO38_RS25325;product=MaoC family dehydratase;protein_id=WP_069246277.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 37774 38250 . + . ID=gene-LDO38_RS25330;Name=LDO38_RS25330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25330;old_locus_tag=BVI2075_740039 NZ_CAJZAL010000179.1 Protein Homology CDS 37774 38250 . + 0 ID=cds-WP_059668374.1;Parent=gene-LDO38_RS25330;Dbxref=GenBank:WP_059668374.1;Name=WP_059668374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398817.1;locus_tag=LDO38_RS25330;product=MaoC family dehydratase;protein_id=WP_059668374.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 38296 38988 . - . ID=gene-LDO38_RS25335;Name=LDO38_RS25335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25335;old_locus_tag=BVI2075_740041 NZ_CAJZAL010000179.1 Protein Homology CDS 38296 38988 . - 0 ID=cds-WP_014723350.1;Parent=gene-LDO38_RS25335;Dbxref=GenBank:WP_014723350.1;Name=WP_014723350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723350.1;locus_tag=LDO38_RS25335;product=glutathione binding-like protein;protein_id=WP_014723350.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 39144 39935 . - . ID=gene-LDO38_RS25340;Name=LDO38_RS25340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25340;old_locus_tag=BVI2075_740042 NZ_CAJZAL010000179.1 Protein Homology CDS 39144 39935 . - 0 ID=cds-WP_046424338.1;Parent=gene-LDO38_RS25340;Dbxref=GenBank:WP_046424338.1;Name=WP_046424338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196422.1;locus_tag=LDO38_RS25340;product=oxepin-CoA hydrolase%2C alternative type;protein_id=WP_046424338.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 40137 40793 . + . ID=gene-LDO38_RS25345;Name=LDO38_RS25345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25345;old_locus_tag=BVI2075_740043 NZ_CAJZAL010000179.1 Protein Homology CDS 40137 40793 . + 0 ID=cds-WP_034194075.1;Parent=gene-LDO38_RS25345;Dbxref=GenBank:WP_034194075.1;Name=WP_034194075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398820.1;locus_tag=LDO38_RS25345;product=glutathione S-transferase;protein_id=WP_034194075.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 40835 42007 . - . ID=gene-LDO38_RS25350;Name=LDO38_RS25350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25350;old_locus_tag=BVI2075_740044 NZ_CAJZAL010000179.1 Protein Homology CDS 40835 42007 . - 0 ID=cds-WP_059461896.1;Parent=gene-LDO38_RS25350;Dbxref=GenBank:WP_059461896.1;Name=WP_059461896.1;Ontology_term=GO:0008483,GO:0016740;gbkey=CDS;go_function=transaminase activity|0008483||IEA,transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025129.1;locus_tag=LDO38_RS25350;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_059461896.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 42041 42538 . - . ID=gene-LDO38_RS25355;Name=LDO38_RS25355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25355;old_locus_tag=BVI2075_740045 NZ_CAJZAL010000179.1 Protein Homology CDS 42041 42538 . - 0 ID=cds-WP_011885512.1;Parent=gene-LDO38_RS25355;Dbxref=GenBank:WP_011885512.1;Name=WP_011885512.1;Ontology_term=GO:0004521,GO:0005515;gbkey=CDS;go_function=RNA endonuclease activity|0004521||IEA,protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545805.1;locus_tag=LDO38_RS25355;product=putative toxin-antitoxin system toxin component%2C PIN family;protein_id=WP_011885512.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 42596 43378 . + . ID=gene-LDO38_RS25360;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=LDO38_RS25360;old_locus_tag=BVI2075_740046 NZ_CAJZAL010000179.1 Protein Homology CDS 42596 43378 . + 0 ID=cds-WP_014723345.1;Parent=gene-LDO38_RS25360;Dbxref=GenBank:WP_014723345.1;Name=WP_014723345.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331598.1;locus_tag=LDO38_RS25360;product=peroxide stress protein YaaA;protein_id=WP_014723345.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 43464 44618 . + . ID=gene-LDO38_RS25365;Name=LDO38_RS25365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25365;old_locus_tag=BVI2075_740047 NZ_CAJZAL010000179.1 Protein Homology CDS 43464 44618 . + 0 ID=cds-WP_069246388.1;Parent=gene-LDO38_RS25365;Dbxref=GenBank:WP_069246388.1;Name=WP_069246388.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213020.1;locus_tag=LDO38_RS25365;product=M14 family metallopeptidase;protein_id=WP_069246388.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 44703 45347 . - . ID=gene-LDO38_RS25370;Name=LDO38_RS25370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25370;old_locus_tag=BVI2075_740048 NZ_CAJZAL010000179.1 Protein Homology CDS 44703 45347 . - 0 ID=cds-WP_059461897.1;Parent=gene-LDO38_RS25370;Dbxref=GenBank:WP_059461897.1;Name=WP_059461897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364302.1;locus_tag=LDO38_RS25370;product=BspC domain-containing protein;protein_id=WP_059461897.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 45470 46144 . - . ID=gene-LDO38_RS25375;Name=LDO38_RS25375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25375;old_locus_tag=BVI2075_740049 NZ_CAJZAL010000179.1 Protein Homology CDS 45470 46144 . - 0 ID=cds-WP_043291379.1;Parent=gene-LDO38_RS25375;Dbxref=GenBank:WP_043291379.1;Name=WP_043291379.1;Ontology_term=GO:0000041,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transition metal ion transport|0000041||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600792.1;locus_tag=LDO38_RS25375;product=energy-coupling factor ABC transporter permease;protein_id=WP_043291379.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 46221 47057 . - . ID=gene-LDO38_RS25380;Name=LDO38_RS25380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25380;old_locus_tag=BVI2075_740050 NZ_CAJZAL010000179.1 Protein Homology CDS 46221 47057 . - 0 ID=cds-WP_011885507.1;Parent=gene-LDO38_RS25380;Dbxref=GenBank:WP_011885507.1;Name=WP_011885507.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657462.1;locus_tag=LDO38_RS25380;product=response regulator transcription factor;protein_id=WP_011885507.1;transl_table=11 NZ_CAJZAL010000179.1 RefSeq gene 47257 48474 . - . ID=gene-LDO38_RS25385;Name=LDO38_RS25385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25385;old_locus_tag=BVI2075_740052 NZ_CAJZAL010000179.1 Protein Homology CDS 47257 48474 . - 0 ID=cds-WP_011885506.1;Parent=gene-LDO38_RS25385;Dbxref=GenBank:WP_011885506.1;Name=WP_011885506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331593.1;locus_tag=LDO38_RS25385;product=DUF2863 family protein;protein_id=WP_011885506.1;transl_table=11 ##sequence-region NZ_CAJZAL010000180.1 1 14168 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000180.1 RefSeq region 1 14168 . + . ID=NZ_CAJZAL010000180.1:1..14168;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_75 NZ_CAJZAL010000180.1 RefSeq gene 1 1139 . - . ID=gene-LDO38_RS25390;Name=LDO38_RS25390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25390;partial=true;start_range=.,1 NZ_CAJZAL010000180.1 Protein Homology CDS 1 1139 . - 0 ID=cds-WP_224056679.1;Parent=gene-LDO38_RS25390;Dbxref=GenBank:WP_224056679.1;Name=WP_224056679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725946.1;locus_tag=LDO38_RS25390;partial=true;product=beta-ketoacyl synthase N-terminal-like domain-containing protein;protein_id=WP_224056679.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000180.1 RefSeq gene 1136 4459 . - . ID=gene-LDO38_RS25395;Name=LDO38_RS25395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25395;old_locus_tag=BVI2075_750002 NZ_CAJZAL010000180.1 Protein Homology CDS 1136 4459 . - 0 ID=cds-WP_224056680.1;Parent=gene-LDO38_RS25395;Dbxref=GenBank:WP_224056680.1;Name=WP_224056680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661347.1;locus_tag=LDO38_RS25395;product=type I polyketide synthase;protein_id=WP_224056680.1;transl_table=11 NZ_CAJZAL010000180.1 RefSeq gene 4456 8877 . - . ID=gene-LDO38_RS25400;Name=LDO38_RS25400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25400;old_locus_tag=BVI2075_750003 NZ_CAJZAL010000180.1 Protein Homology CDS 4456 8877 . - 0 ID=cds-WP_224056681.1;Parent=gene-LDO38_RS25400;Dbxref=GenBank:WP_224056681.1;Name=WP_224056681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759079.1;locus_tag=LDO38_RS25400;product=beta-ketoacyl synthase N-terminal-like domain-containing protein;protein_id=WP_224056681.1;transl_table=11 NZ_CAJZAL010000180.1 RefSeq gene 9046 10056 . - . ID=gene-LDO38_RS25405;Name=LDO38_RS25405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25405;old_locus_tag=BVI2075_750004 NZ_CAJZAL010000180.1 Protein Homology CDS 9046 10056 . - 0 ID=cds-WP_176295556.1;Parent=gene-LDO38_RS25405;Dbxref=GenBank:WP_176295556.1;Name=WP_176295556.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725943.1;locus_tag=LDO38_RS25405;product=TauD/TfdA family dioxygenase;protein_id=WP_176295556.1;transl_table=11 NZ_CAJZAL010000180.1 RefSeq gene 10122 11432 . - . ID=gene-LDO38_RS25410;Name=LDO38_RS25410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25410;old_locus_tag=BVI2075_750005 NZ_CAJZAL010000180.1 Protein Homology CDS 10122 11432 . - 0 ID=cds-WP_224056683.1;Parent=gene-LDO38_RS25410;Dbxref=GenBank:WP_224056683.1;Name=WP_224056683.1;Ontology_term=GO:0019491,GO:0008483;gbkey=CDS;go_function=transaminase activity|0008483||IEA;go_process=ectoine biosynthetic process|0019491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759077.1;locus_tag=LDO38_RS25410;product=diaminobutyrate--2-oxoglutarate transaminase family protein;protein_id=WP_224056683.1;transl_table=11 NZ_CAJZAL010000180.1 RefSeq gene 11640 12590 . - . ID=gene-LDO38_RS25415;Name=LDO38_RS25415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25415;old_locus_tag=BVI2075_750006 NZ_CAJZAL010000180.1 Protein Homology CDS 11640 12590 . - 0 ID=cds-WP_014725941.1;Parent=gene-LDO38_RS25415;Dbxref=GenBank:WP_014725941.1;Name=WP_014725941.1;Ontology_term=GO:0042732,GO:0048040,GO:0070403;gbkey=CDS;go_function=UDP-glucuronate decarboxylase activity|0048040||IEA,NAD+ binding|0070403||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725941.1;locus_tag=LDO38_RS25415;product=UDP-glucuronic acid decarboxylase family protein;protein_id=WP_014725941.1;transl_table=11 NZ_CAJZAL010000180.1 RefSeq gene 12691 13401 . - . ID=gene-LDO38_RS25420;Name=LDO38_RS25420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25420;old_locus_tag=BVI2075_750007 NZ_CAJZAL010000180.1 Protein Homology CDS 12691 13401 . - 0 ID=cds-WP_052691598.1;Parent=gene-LDO38_RS25420;Dbxref=GenBank:WP_052691598.1;Name=WP_052691598.1;Ontology_term=GO:0009058;gbkey=CDS;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF013166.6;locus_tag=LDO38_RS25420;product=thioesterase II family protein;protein_id=WP_052691598.1;transl_table=11 NZ_CAJZAL010000180.1 RefSeq pseudogene 13872 14105 . - . ID=gene-LDO38_RS25425;Name=LDO38_RS25425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS25425;old_locus_tag=BVI2075_750008;partial=true;pseudo=true;start_range=.,13872 NZ_CAJZAL010000180.1 Protein Homology CDS 13872 14105 . - 0 ID=cds-LDO38_RS25425;Parent=gene-LDO38_RS25425;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492556.1;locus_tag=LDO38_RS25425;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,13872;transl_table=11 ##sequence-region NZ_CAJZAL010000181.1 1 12814 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000181.1 RefSeq region 1 12814 . + . ID=NZ_CAJZAL010000181.1:1..12814;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_76 NZ_CAJZAL010000181.1 RefSeq pseudogene 1 438 . + . ID=gene-LDO38_RS30660;Name=LDO38_RS30660;end_range=438,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30660;old_locus_tag=BVI2075_760001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000181.1 Protein Homology CDS 1 438 . + 1 ID=cds-LDO38_RS30660;Parent=gene-LDO38_RS30660;Note=catalyzes the interconversion of alpha-D-mannose 1-phosphate to alpha-D-mannose 6-phosphate and alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=438,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544765.1;locus_tag=LDO38_RS30660;partial=true;product=phosphomannomutase/phosphoglucomutase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000181.1 RefSeq pseudogene 449 708 . + . ID=gene-LDO38_RS30665;Name=LDO38_RS30665;end_range=708,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30665;partial=true;pseudo=true;start_range=.,449 NZ_CAJZAL010000181.1 Protein Homology CDS 449 708 . + 0 ID=cds-LDO38_RS30665;Parent=gene-LDO38_RS30665;Note=catalyzes the interconversion of alpha-D-mannose 1-phosphate to alpha-D-mannose 6-phosphate and alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=708,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004546269.1;locus_tag=LDO38_RS30665;partial=true;product=phosphomannomutase/phosphoglucomutase;pseudo=true;start_range=.,449;transl_table=11 NZ_CAJZAL010000181.1 RefSeq pseudogene 719 1150 . + . ID=gene-LDO38_RS30670;Name=LDO38_RS30670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30670;old_locus_tag=BVI2075_760003;partial=true;pseudo=true;start_range=.,719 NZ_CAJZAL010000181.1 Protein Homology CDS 719 1150 . + 0 ID=cds-LDO38_RS30670;Parent=gene-LDO38_RS30670;Note=catalyzes the interconversion of alpha-D-mannose 1-phosphate to alpha-D-mannose 6-phosphate and alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897868.1;locus_tag=LDO38_RS30670;partial=true;product=phosphomannomutase/phosphoglucomutase;pseudo=true;start_range=.,719;transl_table=11 NZ_CAJZAL010000181.1 RefSeq gene 1224 2321 . + . ID=gene-LDO38_RS25435;Name=waaC;gbkey=Gene;gene=waaC;gene_biotype=protein_coding;locus_tag=LDO38_RS25435;old_locus_tag=BVI2075_760004 NZ_CAJZAL010000181.1 Protein Homology CDS 1224 2321 . + 0 ID=cds-WP_011883561.1;Parent=gene-LDO38_RS25435;Dbxref=GenBank:WP_011883561.1;Name=WP_011883561.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=waaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883561.1;locus_tag=LDO38_RS25435;product=lipopolysaccharide heptosyltransferase I;protein_id=WP_011883561.1;transl_table=11 NZ_CAJZAL010000181.1 RefSeq gene 2374 3258 . + . ID=gene-LDO38_RS25440;Name=LDO38_RS25440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25440;old_locus_tag=BVI2075_760006 NZ_CAJZAL010000181.1 Protein Homology CDS 2374 3258 . + 0 ID=cds-WP_011883563.1;Parent=gene-LDO38_RS25440;Dbxref=GenBank:WP_011883563.1;Name=WP_011883563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332912.1;locus_tag=LDO38_RS25440;product=Kdo hydroxylase family protein;protein_id=WP_011883563.1;transl_table=11 NZ_CAJZAL010000181.1 RefSeq gene 3296 4648 . + . ID=gene-LDO38_RS25445;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=LDO38_RS25445;old_locus_tag=BVI2075_760007 NZ_CAJZAL010000181.1 Protein Homology CDS 3296 4648 . + 0 ID=cds-WP_069246157.1;Parent=gene-LDO38_RS25445;Dbxref=GenBank:WP_069246157.1;Name=WP_069246157.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476705.1;locus_tag=LDO38_RS25445;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_069246157.1;transl_table=11 NZ_CAJZAL010000181.1 RefSeq gene 4693 5340 . - . ID=gene-LDO38_RS25450;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=LDO38_RS25450;old_locus_tag=BVI2075_760008 NZ_CAJZAL010000181.1 Protein Homology CDS 4693 5340 . - 0 ID=cds-WP_034194089.1;Parent=gene-LDO38_RS25450;Dbxref=GenBank:WP_034194089.1;Name=WP_034194089.1;Ontology_term=GO:0019627,GO:0003924,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=GTPase activity|0003924||IEA,metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656154.1;locus_tag=LDO38_RS25450;product=urease accessory protein UreG;protein_id=WP_034194089.1;transl_table=11 NZ_CAJZAL010000181.1 RefSeq gene 5357 6037 . - . ID=gene-LDO38_RS25455;Name=LDO38_RS25455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25455;old_locus_tag=BVI2075_760009 NZ_CAJZAL010000181.1 Protein Homology CDS 5357 6037 . - 0 ID=cds-WP_011883576.1;Parent=gene-LDO38_RS25455;Dbxref=GenBank:WP_011883576.1;Name=WP_011883576.1;Ontology_term=GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601275.1;locus_tag=LDO38_RS25455;product=urease accessory protein UreF;protein_id=WP_011883576.1;transl_table=11 NZ_CAJZAL010000181.1 RefSeq gene 6024 6626 . - . ID=gene-LDO38_RS25460;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=LDO38_RS25460;old_locus_tag=BVI2075_760010 NZ_CAJZAL010000181.1 Protein Homology CDS 6024 6626 . - 0 ID=cds-WP_069246158.1;Parent=gene-LDO38_RS25460;Dbxref=GenBank:WP_069246158.1;Name=WP_069246158.1;Ontology_term=GO:0019627,GO:0016151;gbkey=CDS;gene=ureE;go_function=nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752111.1;locus_tag=LDO38_RS25460;product=urease accessory protein UreE;protein_id=WP_069246158.1;transl_table=11 NZ_CAJZAL010000181.1 RefSeq gene 6644 8350 . - . ID=gene-LDO38_RS25465;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=LDO38_RS25465;old_locus_tag=BVI2075_760011 NZ_CAJZAL010000181.1 Protein Homology CDS 6644 8350 . - 0 ID=cds-WP_014722585.1;Parent=gene-LDO38_RS25465;Dbxref=GenBank:WP_014722585.1;Name=WP_014722585.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758739.1;locus_tag=LDO38_RS25465;product=urease subunit alpha;protein_id=WP_014722585.1;transl_table=11 NZ_CAJZAL010000181.1 RefSeq gene 8379 8684 . - . ID=gene-LDO38_RS25470;Name=LDO38_RS25470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25470;old_locus_tag=BVI2075_760012 NZ_CAJZAL010000181.1 Protein Homology CDS 8379 8684 . - 0 ID=cds-WP_011883582.1;Parent=gene-LDO38_RS25470;Dbxref=GenBank:WP_011883582.1;Name=WP_011883582.1;Ontology_term=GO:0043419,GO:0035550;gbkey=CDS;go_component=urease complex|0035550||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332918.1;locus_tag=LDO38_RS25470;product=urease subunit beta;protein_id=WP_011883582.1;transl_table=11 NZ_CAJZAL010000181.1 RefSeq gene 8699 9001 . - . ID=gene-LDO38_RS25475;Name=ureA;gbkey=Gene;gene=ureA;gene_biotype=protein_coding;locus_tag=LDO38_RS25475;old_locus_tag=BVI2075_760013 NZ_CAJZAL010000181.1 Protein Homology CDS 8699 9001 . - 0 ID=cds-WP_006406310.1;Parent=gene-LDO38_RS25475;Dbxref=GenBank:WP_006406310.1;Name=WP_006406310.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureA;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008923043.1;locus_tag=LDO38_RS25475;product=urease subunit gamma;protein_id=WP_006406310.1;transl_table=11 NZ_CAJZAL010000181.1 RefSeq gene 9234 10109 . - . ID=gene-LDO38_RS25480;Name=LDO38_RS25480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25480;old_locus_tag=BVI2075_760014 NZ_CAJZAL010000181.1 Protein Homology CDS 9234 10109 . - 0 ID=cds-WP_011883584.1;Parent=gene-LDO38_RS25480;Dbxref=GenBank:WP_011883584.1;Name=WP_011883584.1;Ontology_term=GO:0008152,GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758742.1;locus_tag=LDO38_RS25480;product=urease accessory protein UreD;protein_id=WP_011883584.1;transl_table=11 NZ_CAJZAL010000181.1 RefSeq gene 10219 10911 . - . ID=gene-LDO38_RS25485;Name=urtE;gbkey=Gene;gene=urtE;gene_biotype=protein_coding;locus_tag=LDO38_RS25485;old_locus_tag=BVI2075_760015 NZ_CAJZAL010000181.1 Protein Homology CDS 10219 10911 . - 0 ID=cds-WP_011883585.1;Parent=gene-LDO38_RS25485;Dbxref=GenBank:WP_011883585.1;Name=WP_011883585.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtE;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332923.1;locus_tag=LDO38_RS25485;product=urea ABC transporter ATP-binding subunit UrtE;protein_id=WP_011883585.1;transl_table=11 NZ_CAJZAL010000181.1 RefSeq gene 10916 11773 . - . ID=gene-LDO38_RS25490;Name=urtD;gbkey=Gene;gene=urtD;gene_biotype=protein_coding;locus_tag=LDO38_RS25490;old_locus_tag=BVI2075_760016 NZ_CAJZAL010000181.1 Protein Homology CDS 10916 11773 . - 0 ID=cds-WP_011883587.1;Parent=gene-LDO38_RS25490;Dbxref=GenBank:WP_011883587.1;Name=WP_011883587.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtD;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406305.1;locus_tag=LDO38_RS25490;product=urea ABC transporter ATP-binding protein UrtD;protein_id=WP_011883587.1;transl_table=11 NZ_CAJZAL010000181.1 RefSeq gene 11770 12814 . - . ID=gene-LDO38_RS25495;Name=urtC;end_range=12814,.;gbkey=Gene;gene=urtC;gene_biotype=protein_coding;locus_tag=LDO38_RS25495;old_locus_tag=BVI2075_760017;partial=true NZ_CAJZAL010000181.1 Protein Homology CDS 11770 12814 . - 1 ID=cds-WP_224056684.1;Parent=gene-LDO38_RS25495;Dbxref=GenBank:WP_224056684.1;Name=WP_224056684.1;Ontology_term=GO:0015840,GO:0033221,GO:0005886,GO:0055052;end_range=12814,.;gbkey=CDS;gene=urtC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656160.1;locus_tag=LDO38_RS25495;partial=true;product=urea ABC transporter permease subunit UrtC;protein_id=WP_224056684.1;transl_table=11 ##sequence-region NZ_CAJZAL010000182.1 1 23205 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000182.1 RefSeq region 1 23205 . + . ID=NZ_CAJZAL010000182.1:1..23205;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_77 NZ_CAJZAL010000182.1 RefSeq gene 1 482 . - . ID=gene-LDO38_RS25500;Name=LDO38_RS25500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25500;partial=true;start_range=.,1 NZ_CAJZAL010000182.1 Protein Homology CDS 1 482 . - 0 ID=cds-WP_224056686.1;Parent=gene-LDO38_RS25500;Dbxref=GenBank:WP_224056686.1;Name=WP_224056686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213383.1;locus_tag=LDO38_RS25500;partial=true;product=PfkB family carbohydrate kinase;protein_id=WP_224056686.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000182.1 RefSeq gene 479 1510 . - . ID=gene-LDO38_RS25505;Name=LDO38_RS25505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25505;old_locus_tag=BVI2075_770002 NZ_CAJZAL010000182.1 Protein Homology CDS 479 1510 . - 0 ID=cds-WP_034193102.1;Parent=gene-LDO38_RS25505;Dbxref=GenBank:WP_034193102.1;Name=WP_034193102.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759468.1;locus_tag=LDO38_RS25505;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_034193102.1;transl_table=11 NZ_CAJZAL010000182.1 RefSeq gene 1571 2590 . - . ID=gene-LDO38_RS25510;Name=LDO38_RS25510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25510;old_locus_tag=BVI2075_770003 NZ_CAJZAL010000182.1 Protein Homology CDS 1571 2590 . - 0 ID=cds-WP_011884751.1;Parent=gene-LDO38_RS25510;Dbxref=GenBank:WP_011884751.1;Name=WP_011884751.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759467.1;locus_tag=LDO38_RS25510;product=ABC transporter permease;protein_id=WP_011884751.1;transl_table=11 NZ_CAJZAL010000182.1 RefSeq gene 2587 4200 . - . ID=gene-LDO38_RS25515;Name=LDO38_RS25515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25515;old_locus_tag=BVI2075_770004 NZ_CAJZAL010000182.1 Protein Homology CDS 2587 4200 . - 0 ID=cds-WP_011884749.1;Parent=gene-LDO38_RS25515;Dbxref=GenBank:WP_011884749.1;Name=WP_011884749.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884749.1;locus_tag=LDO38_RS25515;product=sugar ABC transporter ATP-binding protein;protein_id=WP_011884749.1;transl_table=11 NZ_CAJZAL010000182.1 RefSeq gene 4356 5306 . - . ID=gene-LDO38_RS25520;Name=LDO38_RS25520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25520;old_locus_tag=BVI2075_770005 NZ_CAJZAL010000182.1 Protein Homology CDS 4356 5306 . - 0 ID=cds-WP_059462586.1;Parent=gene-LDO38_RS25520;Dbxref=GenBank:WP_059462586.1;Name=WP_059462586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332399.1;locus_tag=LDO38_RS25520;product=sugar ABC transporter substrate-binding protein;protein_id=WP_059462586.1;transl_table=11 NZ_CAJZAL010000182.1 RefSeq gene 5838 6764 . - . ID=gene-LDO38_RS25525;Name=LDO38_RS25525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25525;old_locus_tag=BVI2075_770007 NZ_CAJZAL010000182.1 Protein Homology CDS 5838 6764 . - 0 ID=cds-WP_011884743.1;Parent=gene-LDO38_RS25525;Dbxref=GenBank:WP_011884743.1;Name=WP_011884743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884743.1;locus_tag=LDO38_RS25525;product=CysB family HTH-type transcriptional regulator;protein_id=WP_011884743.1;transl_table=11 NZ_CAJZAL010000182.1 RefSeq gene 6845 7903 . - . ID=gene-LDO38_RS25530;Name=LDO38_RS25530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25530;old_locus_tag=BVI2075_770008 NZ_CAJZAL010000182.1 Protein Homology CDS 6845 7903 . - 0 ID=cds-WP_059475799.1;Parent=gene-LDO38_RS25530;Dbxref=GenBank:WP_059475799.1;Name=WP_059475799.1;Ontology_term=GO:0005524,GO:0015419,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897109.1;locus_tag=LDO38_RS25530;product=sulfate/molybdate ABC transporter ATP-binding protein;protein_id=WP_059475799.1;transl_table=11 NZ_CAJZAL010000182.1 RefSeq gene 7917 8864 . - . ID=gene-LDO38_RS25535;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=LDO38_RS25535;old_locus_tag=BVI2075_770009 NZ_CAJZAL010000182.1 Protein Homology CDS 7917 8864 . - 0 ID=cds-WP_045579131.1;Parent=gene-LDO38_RS25535;Dbxref=GenBank:WP_045579131.1;Name=WP_045579131.1;Ontology_term=GO:1902358,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysW;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363820.1;locus_tag=LDO38_RS25535;product=sulfate ABC transporter permease subunit CysW;protein_id=WP_045579131.1;transl_table=11 NZ_CAJZAL010000182.1 RefSeq gene 8861 9748 . - . ID=gene-LDO38_RS25540;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=LDO38_RS25540;old_locus_tag=BVI2075_770010 NZ_CAJZAL010000182.1 Protein Homology CDS 8861 9748 . - 0 ID=cds-WP_014722988.1;Parent=gene-LDO38_RS25540;Dbxref=GenBank:WP_014722988.1;Name=WP_014722988.1;Ontology_term=GO:1902358,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysT;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010103892.1;locus_tag=LDO38_RS25540;product=sulfate ABC transporter permease subunit CysT;protein_id=WP_014722988.1;transl_table=11 NZ_CAJZAL010000182.1 RefSeq gene 9895 10932 . - . ID=gene-LDO38_RS25545;Name=LDO38_RS25545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25545;old_locus_tag=BVI2075_770011 NZ_CAJZAL010000182.1 Protein Homology CDS 9895 10932 . - 0 ID=cds-WP_043291695.1;Parent=gene-LDO38_RS25545;Dbxref=GenBank:WP_043291695.1;Name=WP_043291695.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400148.1;locus_tag=LDO38_RS25545;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_043291695.1;transl_table=11 NZ_CAJZAL010000182.1 RefSeq gene 11197 11844 . + . ID=gene-LDO38_RS25550;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=LDO38_RS25550;old_locus_tag=BVI2075_770013 NZ_CAJZAL010000182.1 Protein Homology CDS 11197 11844 . + 0 ID=cds-WP_011884733.1;Parent=gene-LDO38_RS25550;Dbxref=GenBank:WP_011884733.1;Name=WP_011884733.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400150.1;locus_tag=LDO38_RS25550;product=transcriptional repressor LexA;protein_id=WP_011884733.1;transl_table=11 NZ_CAJZAL010000182.1 RefSeq gene 11871 12209 . + . ID=gene-LDO38_RS25555;Name=LDO38_RS25555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25555;old_locus_tag=BVI2075_770014 NZ_CAJZAL010000182.1 Protein Homology CDS 11871 12209 . + 0 ID=cds-WP_011884731.1;Parent=gene-LDO38_RS25555;Dbxref=GenBank:WP_011884731.1;Name=WP_011884731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600929.1;locus_tag=LDO38_RS25555;product=hypothetical protein;protein_id=WP_011884731.1;transl_table=11 NZ_CAJZAL010000182.1 RefSeq gene 12239 12940 . + . ID=gene-LDO38_RS25560;Name=LDO38_RS25560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25560;old_locus_tag=BVI2075_770015 NZ_CAJZAL010000182.1 Protein Homology CDS 12239 12940 . + 0 ID=cds-WP_224056687.1;Parent=gene-LDO38_RS25560;Dbxref=GenBank:WP_224056687.1;Name=WP_224056687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484209.1;locus_tag=LDO38_RS25560;product=DUF2939 domain-containing protein;protein_id=WP_224056687.1;transl_table=11 NZ_CAJZAL010000182.1 RefSeq gene 13045 13542 . - . ID=gene-LDO38_RS25565;Name=LDO38_RS25565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25565;old_locus_tag=BVI2075_770016 NZ_CAJZAL010000182.1 Protein Homology CDS 13045 13542 . - 0 ID=cds-WP_011884727.1;Parent=gene-LDO38_RS25565;Dbxref=GenBank:WP_011884727.1;Name=WP_011884727.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351890.1;locus_tag=LDO38_RS25565;product=universal stress protein;protein_id=WP_011884727.1;transl_table=11 NZ_CAJZAL010000182.1 RefSeq gene 13868 14782 . + . ID=gene-LDO38_RS25570;Name=nodI;gbkey=Gene;gene=nodI;gene_biotype=protein_coding;locus_tag=LDO38_RS25570;old_locus_tag=BVI2075_770017 NZ_CAJZAL010000182.1 Protein Homology CDS 13868 14782 . + 0 ID=cds-WP_124259877.1;Parent=gene-LDO38_RS25570;Dbxref=GenBank:WP_124259877.1;Name=WP_124259877.1;gbkey=CDS;gene=nodI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897117.1;locus_tag=LDO38_RS25570;product=nodulation factor ABC transporter ATP-binding protein NodI;protein_id=WP_124259877.1;transl_table=11 NZ_CAJZAL010000182.1 RefSeq gene 14789 15622 . + . ID=gene-LDO38_RS25575;Name=LDO38_RS25575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25575;old_locus_tag=BVI2075_770018 NZ_CAJZAL010000182.1 Protein Homology CDS 14789 15622 . + 0 ID=cds-WP_045579134.1;Parent=gene-LDO38_RS25575;Dbxref=GenBank:WP_045579134.1;Name=WP_045579134.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004545156.1;locus_tag=LDO38_RS25575;product=ABC transporter permease;protein_id=WP_045579134.1;transl_table=11 NZ_CAJZAL010000182.1 RefSeq gene 15671 16093 . - . ID=gene-LDO38_RS25580;Name=LDO38_RS25580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25580;old_locus_tag=BVI2075_770019 NZ_CAJZAL010000182.1 Protein Homology CDS 15671 16093 . - 0 ID=cds-WP_011884724.1;Parent=gene-LDO38_RS25580;Dbxref=GenBank:WP_011884724.1;Name=WP_011884724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897119.1;locus_tag=LDO38_RS25580;product=hypothetical protein;protein_id=WP_011884724.1;transl_table=11 NZ_CAJZAL010000182.1 RefSeq gene 16306 17364 . - . ID=gene-LDO38_RS25585;Name=LDO38_RS25585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25585;old_locus_tag=BVI2075_770020 NZ_CAJZAL010000182.1 Protein Homology CDS 16306 17364 . - 0 ID=cds-WP_124259876.1;Parent=gene-LDO38_RS25585;Dbxref=GenBank:WP_124259876.1;Name=WP_124259876.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400158.1;locus_tag=LDO38_RS25585;product=permease;protein_id=WP_124259876.1;transl_table=11 NZ_CAJZAL010000182.1 RefSeq gene 17361 18500 . - . ID=gene-LDO38_RS25590;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=LDO38_RS25590;old_locus_tag=BVI2075_770021 NZ_CAJZAL010000182.1 Protein Homology CDS 17361 18500 . - 0 ID=cds-WP_069224191.1;Parent=gene-LDO38_RS25590;Dbxref=GenBank:WP_069224191.1;Name=WP_069224191.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722980.1;locus_tag=LDO38_RS25590;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_069224191.1;transl_table=11 NZ_CAJZAL010000182.1 RefSeq pseudogene 18654 18843 . - . ID=gene-LDO38_RS25595;Name=LDO38_RS25595;end_range=18843,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS25595;partial=true;pseudo=true;start_range=.,18654 NZ_CAJZAL010000182.1 Protein Homology CDS 18654 18843 . - 0 ID=cds-LDO38_RS25595;Parent=gene-LDO38_RS25595;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=18843,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416770.1;locus_tag=LDO38_RS25595;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,18654;transl_table=11 NZ_CAJZAL010000182.1 RefSeq gene 19004 20056 . - . ID=gene-LDO38_RS25600;Name=LDO38_RS25600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25600;old_locus_tag=BVI2075_770024 NZ_CAJZAL010000182.1 Protein Homology CDS 19004 20056 . - 0 ID=cds-WP_014722978.1;Parent=gene-LDO38_RS25600;Dbxref=GenBank:WP_014722978.1;Name=WP_014722978.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601897.1;locus_tag=LDO38_RS25600;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_014722978.1;transl_table=11 NZ_CAJZAL010000182.1 RefSeq gene 20294 20917 . + . ID=gene-LDO38_RS25605;Name=LDO38_RS25605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25605;old_locus_tag=BVI2075_770023 NZ_CAJZAL010000182.1 Protein Homology CDS 20294 20917 . + 0 ID=cds-WP_011884717.1;Parent=gene-LDO38_RS25605;Dbxref=GenBank:WP_011884717.1;Name=WP_011884717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351878.1;locus_tag=LDO38_RS25605;product=phospholipase D family protein;protein_id=WP_011884717.1;transl_table=11 NZ_CAJZAL010000182.1 RefSeq gene 21078 21299 . - . ID=gene-LDO38_RS25610;Name=LDO38_RS25610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25610;old_locus_tag=BVI2075_770025 NZ_CAJZAL010000182.1 Protein Homology CDS 21078 21299 . - 0 ID=cds-WP_011884715.1;Parent=gene-LDO38_RS25610;Dbxref=GenBank:WP_011884715.1;Name=WP_011884715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884715.1;locus_tag=LDO38_RS25610;product=hypothetical protein;protein_id=WP_011884715.1;transl_table=11 NZ_CAJZAL010000182.1 RefSeq gene 21528 22499 . + . ID=gene-LDO38_RS25615;Name=LDO38_RS25615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25615;old_locus_tag=BVI2075_770026 NZ_CAJZAL010000182.1 Protein Homology CDS 21528 22499 . + 0 ID=cds-WP_011884713.1;Parent=gene-LDO38_RS25615;Dbxref=GenBank:WP_011884713.1;Name=WP_011884713.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884713.1;locus_tag=LDO38_RS25615;product=GGDEF domain-containing protein;protein_id=WP_011884713.1;transl_table=11 NZ_CAJZAL010000182.1 RefSeq gene 22595 23068 . - . ID=gene-LDO38_RS25620;Name=LDO38_RS25620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25620;old_locus_tag=BVI2075_770027 NZ_CAJZAL010000182.1 Protein Homology CDS 22595 23068 . - 0 ID=cds-WP_014722977.1;Parent=gene-LDO38_RS25620;Dbxref=GenBank:WP_014722977.1;Name=WP_014722977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363804.1;locus_tag=LDO38_RS25620;product=VOC family protein;protein_id=WP_014722977.1;transl_table=11 ##sequence-region NZ_CAJZAL010000183.1 1 79124 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000183.1 RefSeq region 1 79124 . + . ID=NZ_CAJZAL010000183.1:1..79124;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_78 NZ_CAJZAL010000183.1 RefSeq gene 109 654 . - . ID=gene-LDO38_RS25625;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=LDO38_RS25625;old_locus_tag=BVI2075_780001 NZ_CAJZAL010000183.1 Protein Homology CDS 109 654 . - 0 ID=cds-WP_175949336.1;Parent=gene-LDO38_RS25625;Dbxref=GenBank:WP_175949336.1;Name=WP_175949336.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725815.1;locus_tag=LDO38_RS25625;product=[NiFe]-hydrogenase assembly chaperone HybE;protein_id=WP_175949336.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 657 884 . - . ID=gene-LDO38_RS25630;Name=LDO38_RS25630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25630;old_locus_tag=BVI2075_780002 NZ_CAJZAL010000183.1 Protein Homology CDS 657 884 . - 0 ID=cds-WP_011880069.1;Parent=gene-LDO38_RS25630;Dbxref=GenBank:WP_011880069.1;Name=WP_011880069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880069.1;locus_tag=LDO38_RS25630;product=rubredoxin;protein_id=WP_011880069.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 887 1750 . - . ID=gene-LDO38_RS25635;Name=LDO38_RS25635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25635;old_locus_tag=BVI2075_780003 NZ_CAJZAL010000183.1 Protein Homology CDS 887 1750 . - 0 ID=cds-WP_014725814.1;Parent=gene-LDO38_RS25635;Dbxref=GenBank:WP_014725814.1;Name=WP_014725814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880068.1;locus_tag=LDO38_RS25635;product=hydrogenase expression/formation protein;protein_id=WP_014725814.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 1768 2292 . - . ID=gene-LDO38_RS25640;Name=LDO38_RS25640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25640;old_locus_tag=BVI2075_780004 NZ_CAJZAL010000183.1 Protein Homology CDS 1768 2292 . - 0 ID=cds-WP_014725813.1;Parent=gene-LDO38_RS25640;Dbxref=GenBank:WP_014725813.1;Name=WP_014725813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725813.1;locus_tag=LDO38_RS25640;product=hydrogenase;protein_id=WP_014725813.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 2289 2639 . - . ID=gene-LDO38_RS25645;Name=LDO38_RS25645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25645;old_locus_tag=BVI2075_780005 NZ_CAJZAL010000183.1 Protein Homology CDS 2289 2639 . - 0 ID=cds-WP_059561329.1;Parent=gene-LDO38_RS25645;Dbxref=GenBank:WP_059561329.1;Name=WP_059561329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880066.1;locus_tag=LDO38_RS25645;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WP_059561329.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 2630 3307 . - . ID=gene-LDO38_RS25650;Name=LDO38_RS25650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25650;old_locus_tag=BVI2075_780006 NZ_CAJZAL010000183.1 Protein Homology CDS 2630 3307 . - 0 ID=cds-WP_014725812.1;Parent=gene-LDO38_RS25650;Dbxref=GenBank:WP_014725812.1;Name=WP_014725812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880065.1;locus_tag=LDO38_RS25650;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_014725812.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 3315 4025 . - . ID=gene-LDO38_RS25655;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=LDO38_RS25655;old_locus_tag=BVI2075_780007 NZ_CAJZAL010000183.1 Protein Homology CDS 3315 4025 . - 0 ID=cds-WP_011880064.1;Parent=gene-LDO38_RS25655;Dbxref=GenBank:WP_011880064.1;Name=WP_011880064.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016020;gbkey=CDS;gene=cybH;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880064.1;locus_tag=LDO38_RS25655;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=WP_011880064.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 4144 6000 . - . ID=gene-LDO38_RS25660;Name=LDO38_RS25660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25660;old_locus_tag=BVI2075_780008 NZ_CAJZAL010000183.1 Protein Homology CDS 4144 6000 . - 0 ID=cds-WP_011880063.1;Parent=gene-LDO38_RS25660;Dbxref=GenBank:WP_011880063.1;Name=WP_011880063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019574237.1;locus_tag=LDO38_RS25660;product=nickel-dependent hydrogenase large subunit;protein_id=WP_011880063.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 6058 7134 . - . ID=gene-LDO38_RS25665;Name=LDO38_RS25665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25665;old_locus_tag=BVI2075_780009 NZ_CAJZAL010000183.1 Protein Homology CDS 6058 7134 . - 0 ID=cds-WP_011880062.1;Parent=gene-LDO38_RS25665;Dbxref=GenBank:WP_011880062.1;Name=WP_011880062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880062.1;locus_tag=LDO38_RS25665;product=hydrogenase small subunit;protein_id=WP_011880062.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 7789 8856 . + . ID=gene-LDO38_RS25670;Name=LDO38_RS25670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25670;old_locus_tag=BVI2075_780010 NZ_CAJZAL010000183.1 Protein Homology CDS 7789 8856 . + 0 ID=cds-WP_176154596.1;Parent=gene-LDO38_RS25670;Dbxref=GenBank:WP_176154596.1;Name=WP_176154596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725809.1;locus_tag=LDO38_RS25670;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_176154596.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 8888 10498 . + . ID=gene-LDO38_RS25675;Name=LDO38_RS25675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25675;old_locus_tag=BVI2075_780011 NZ_CAJZAL010000183.1 Protein Homology CDS 8888 10498 . + 0 ID=cds-WP_059463617.1;Parent=gene-LDO38_RS25675;Dbxref=GenBank:WP_059463617.1;Name=WP_059463617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725808.1;locus_tag=LDO38_RS25675;product=carbamoyltransferase C-terminal domain-containing protein;protein_id=WP_059463617.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 10533 10952 . - . ID=gene-LDO38_RS25680;Name=LDO38_RS25680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25680;old_locus_tag=BVI2075_780012 NZ_CAJZAL010000183.1 Protein Homology CDS 10533 10952 . - 0 ID=cds-WP_014725807.1;Parent=gene-LDO38_RS25680;Dbxref=GenBank:WP_014725807.1;Name=WP_014725807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725807.1;locus_tag=LDO38_RS25680;product=hypothetical protein;protein_id=WP_014725807.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 11118 11804 . - . ID=gene-LDO38_RS25685;Name=LDO38_RS25685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25685;old_locus_tag=BVI2075_780013 NZ_CAJZAL010000183.1 Protein Homology CDS 11118 11804 . - 0 ID=cds-WP_224056688.1;Parent=gene-LDO38_RS25685;Dbxref=GenBank:WP_224056688.1;Name=WP_224056688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725806.1;locus_tag=LDO38_RS25685;product=carbonic anhydrase;protein_id=WP_224056688.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 12475 13093 . - . ID=gene-LDO38_RS25690;Name=LDO38_RS25690;end_range=13093,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25690;old_locus_tag=BVI2075_780015;partial=true NZ_CAJZAL010000183.1 Protein Homology CDS 12475 13093 . - 1 ID=cds-WP_435520988.1;Parent=gene-LDO38_RS25690;Dbxref=GenBank:WP_435520988.1;Name=WP_435520988.1;Ontology_term=GO:0007155,GO:0015031;end_range=13093,.;gbkey=CDS;go_process=cell adhesion|0007155||IEA,protein transport|0015031||IEA;inference=COORDINATES: protein motif:HMM:NF015831.6;locus_tag=LDO38_RS25690;partial=true;product=YadA family autotransporter adhesin;protein_id=WP_435520988.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 13104 13394 . + . ID=gene-LDO38_RS30675;Name=LDO38_RS30675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30675;partial=true;start_range=.,13104 NZ_CAJZAL010000183.1 GeneMarkS-2+ CDS 13104 13394 . + 0 ID=cds-WP_435520989.1;Parent=gene-LDO38_RS30675;Dbxref=GenBank:WP_435520989.1;Name=WP_435520989.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30675;partial=true;product=hypothetical protein;protein_id=WP_435520989.1;start_range=.,13104;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 13786 14091 . - . ID=gene-LDO38_RS25695;Name=LDO38_RS25695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25695;old_locus_tag=BVI2075_780017 NZ_CAJZAL010000183.1 Protein Homology CDS 13786 14091 . - 0 ID=cds-WP_014725802.1;Parent=gene-LDO38_RS25695;Dbxref=GenBank:WP_014725802.1;Name=WP_014725802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725802.1;locus_tag=LDO38_RS25695;product=H-NS histone family protein;protein_id=WP_014725802.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 15537 16421 . + . ID=gene-LDO38_RS25700;Name=LDO38_RS25700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25700;old_locus_tag=BVI2075_780019 NZ_CAJZAL010000183.1 GeneMarkS-2+ CDS 15537 16421 . + 0 ID=cds-WP_060081309.1;Parent=gene-LDO38_RS25700;Dbxref=GenBank:WP_060081309.1;Name=WP_060081309.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS25700;product=winged helix-turn-helix domain-containing protein;protein_id=WP_060081309.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 16550 16867 . + . ID=gene-LDO38_RS25705;Name=LDO38_RS25705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25705;old_locus_tag=BVI2075_780020 NZ_CAJZAL010000183.1 GeneMarkS-2+ CDS 16550 16867 . + 0 ID=cds-WP_014725801.1;Parent=gene-LDO38_RS25705;Dbxref=GenBank:WP_014725801.1;Name=WP_014725801.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS25705;product=hypothetical protein;protein_id=WP_014725801.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 16943 17470 . - . ID=gene-LDO38_RS25710;Name=LDO38_RS25710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25710;old_locus_tag=BVI2075_780021 NZ_CAJZAL010000183.1 GeneMarkS-2+ CDS 16943 17470 . - 0 ID=cds-WP_063900340.1;Parent=gene-LDO38_RS25710;Dbxref=GenBank:WP_063900340.1;Name=WP_063900340.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS25710;product=hypothetical protein;protein_id=WP_063900340.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 18171 20807 . - . ID=gene-LDO38_RS25715;Name=LDO38_RS25715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25715;old_locus_tag=BVI2075_780024 NZ_CAJZAL010000183.1 Protein Homology CDS 18171 20807 . - 0 ID=cds-WP_224056689.1;Parent=gene-LDO38_RS25715;Dbxref=GenBank:WP_224056689.1;Name=WP_224056689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527073.1;locus_tag=LDO38_RS25715;product=YadA-like family protein;protein_id=WP_224056689.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 21709 22542 . - . ID=gene-LDO38_RS25720;Name=LDO38_RS25720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25720;old_locus_tag=BVI2075_780027 NZ_CAJZAL010000183.1 Protein Homology CDS 21709 22542 . - 0 ID=cds-WP_175984514.1;Parent=gene-LDO38_RS25720;Dbxref=GenBank:WP_175984514.1;Name=WP_175984514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725795.1;locus_tag=LDO38_RS25720;product=EAL domain-containing protein;protein_id=WP_175984514.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 22789 23349 . + . ID=gene-LDO38_RS25725;Name=LDO38_RS25725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25725 NZ_CAJZAL010000183.1 GeneMarkS-2+ CDS 22789 23349 . + 0 ID=cds-WP_176315220.1;Parent=gene-LDO38_RS25725;Dbxref=GenBank:WP_176315220.1;Name=WP_176315220.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS25725;product=hypothetical protein;protein_id=WP_176315220.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 23626 24288 . + . ID=gene-LDO38_RS25730;Name=LDO38_RS25730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25730;old_locus_tag=BVI2075_780031 NZ_CAJZAL010000183.1 Protein Homology CDS 23626 24288 . + 0 ID=cds-WP_059603561.1;Parent=gene-LDO38_RS25730;Dbxref=GenBank:WP_059603561.1;Name=WP_059603561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339531.1;locus_tag=LDO38_RS25730;product=hypothetical protein;protein_id=WP_059603561.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 24299 24850 . + . ID=gene-LDO38_RS25735;Name=LDO38_RS25735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25735 NZ_CAJZAL010000183.1 Protein Homology CDS 24299 24850 . + 0 ID=cds-WP_175984513.1;Parent=gene-LDO38_RS25735;Dbxref=GenBank:WP_175984513.1;Name=WP_175984513.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017315.6;locus_tag=LDO38_RS25735;product=PAAR domain-containing protein;protein_id=WP_175984513.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 24847 25395 . + . ID=gene-LDO38_RS25740;Name=LDO38_RS25740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25740;old_locus_tag=BVI2075_780033 NZ_CAJZAL010000183.1 Protein Homology CDS 24847 25395 . + 0 ID=cds-WP_059603567.1;Parent=gene-LDO38_RS25740;Dbxref=GenBank:WP_059603567.1;Name=WP_059603567.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017315.6;locus_tag=LDO38_RS25740;product=PAAR domain-containing protein;protein_id=WP_059603567.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 25383 26315 . + . ID=gene-LDO38_RS25745;Name=LDO38_RS25745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25745;old_locus_tag=BVI2075_780034 NZ_CAJZAL010000183.1 Protein Homology CDS 25383 26315 . + 0 ID=cds-WP_224056690.1;Parent=gene-LDO38_RS25745;Dbxref=GenBank:WP_224056690.1;Name=WP_224056690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013591188.1;locus_tag=LDO38_RS25745;product=glycine zipper family protein;protein_id=WP_224056690.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 26326 26988 . + . ID=gene-LDO38_RS25750;Name=LDO38_RS25750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25750;old_locus_tag=BVI2075_780036 NZ_CAJZAL010000183.1 GeneMarkS-2+ CDS 26326 26988 . + 0 ID=cds-WP_146230190.1;Parent=gene-LDO38_RS25750;Dbxref=GenBank:WP_146230190.1;Name=WP_146230190.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS25750;product=hypothetical protein;protein_id=WP_146230190.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 27294 30548 . - . ID=gene-LDO38_RS25755;Name=LDO38_RS25755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25755;old_locus_tag=BVI2075_780038 NZ_CAJZAL010000183.1 Protein Homology CDS 27294 30548 . - 0 ID=cds-WP_224056691.1;Parent=gene-LDO38_RS25755;Dbxref=GenBank:WP_224056691.1;Name=WP_224056691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725794.1;locus_tag=LDO38_RS25755;product=ATP-binding protein;protein_id=WP_224056691.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 30548 31210 . - . ID=gene-LDO38_RS25760;Name=LDO38_RS25760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25760;old_locus_tag=BVI2075_780039 NZ_CAJZAL010000183.1 Protein Homology CDS 30548 31210 . - 0 ID=cds-WP_014725793.1;Parent=gene-LDO38_RS25760;Dbxref=GenBank:WP_014725793.1;Name=WP_014725793.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010103467.1;locus_tag=LDO38_RS25760;product=response regulator transcription factor;protein_id=WP_014725793.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 31899 32642 . + . ID=gene-LDO38_RS25765;Name=LDO38_RS25765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25765;old_locus_tag=BVI2075_780042 NZ_CAJZAL010000183.1 Protein Homology CDS 31899 32642 . + 0 ID=cds-WP_014725792.1;Parent=gene-LDO38_RS25765;Dbxref=GenBank:WP_014725792.1;Name=WP_014725792.1;Ontology_term=GO:0004089;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725792.1;locus_tag=LDO38_RS25765;product=carbonic anhydrase family protein;protein_id=WP_014725792.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 32767 33702 . - . ID=gene-LDO38_RS25770;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=LDO38_RS25770;old_locus_tag=BVI2075_780043 NZ_CAJZAL010000183.1 Protein Homology CDS 32767 33702 . - 0 ID=cds-WP_014725791.1;Parent=gene-LDO38_RS25770;Dbxref=GenBank:WP_014725791.1;Name=WP_014725791.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=gcvA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725791.1;locus_tag=LDO38_RS25770;product=transcriptional regulator GcvA;protein_id=WP_014725791.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 33841 35061 . + . ID=gene-LDO38_RS25775;Name=LDO38_RS25775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25775;old_locus_tag=BVI2075_780044 NZ_CAJZAL010000183.1 Protein Homology CDS 33841 35061 . + 0 ID=cds-WP_014725790.1;Parent=gene-LDO38_RS25775;Dbxref=GenBank:WP_014725790.1;Name=WP_014725790.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880058.1;locus_tag=LDO38_RS25775;product=MFS transporter;protein_id=WP_014725790.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 35058 35954 . + . ID=gene-LDO38_RS25780;Name=LDO38_RS25780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25780;old_locus_tag=BVI2075_780045 NZ_CAJZAL010000183.1 Protein Homology CDS 35058 35954 . + 0 ID=cds-WP_014725789.1;Parent=gene-LDO38_RS25780;Dbxref=GenBank:WP_014725789.1;Name=WP_014725789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372458.1;locus_tag=LDO38_RS25780;product=oxidoreductase;protein_id=WP_014725789.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 36230 36349 . - . ID=gene-LDO38_RS30215;Name=LDO38_RS30215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30215;old_locus_tag=BVI2075_780046 NZ_CAJZAL010000183.1 Protein Homology CDS 36230 36349 . - 0 ID=cds-WP_081053380.1;Parent=gene-LDO38_RS30215;Dbxref=GenBank:WP_081053380.1;Name=WP_081053380.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF012392.6;locus_tag=LDO38_RS30215;product=helix-turn-helix domain-containing protein;protein_id=WP_081053380.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 36363 36938 . - . ID=gene-LDO38_RS25790;Name=LDO38_RS25790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25790;old_locus_tag=BVI2075_780047 NZ_CAJZAL010000183.1 GeneMarkS-2+ CDS 36363 36938 . - 0 ID=cds-WP_176314460.1;Parent=gene-LDO38_RS25790;Dbxref=GenBank:WP_176314460.1;Name=WP_176314460.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS25790;product=hypothetical protein;protein_id=WP_176314460.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 36961 37407 . + . ID=gene-LDO38_RS25795;Name=LDO38_RS25795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25795;old_locus_tag=BVI2075_780048 NZ_CAJZAL010000183.1 Protein Homology CDS 36961 37407 . + 0 ID=cds-WP_224056692.1;Parent=gene-LDO38_RS25795;Dbxref=GenBank:WP_224056692.1;Name=WP_224056692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725788.1;locus_tag=LDO38_RS25795;product=cupin domain-containing protein;protein_id=WP_224056692.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 37665 38033 . - . ID=gene-LDO38_RS25800;Name=LDO38_RS25800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25800;old_locus_tag=BVI2075_780049 NZ_CAJZAL010000183.1 Protein Homology CDS 37665 38033 . - 0 ID=cds-WP_224056693.1;Parent=gene-LDO38_RS25800;Dbxref=GenBank:WP_224056693.1;Name=WP_224056693.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490921.1;locus_tag=LDO38_RS25800;product=response regulator transcription factor;protein_id=WP_224056693.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 38171 38458 . - . ID=gene-LDO38_RS25805;Name=LDO38_RS25805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25805;old_locus_tag=BVI2075_780050 NZ_CAJZAL010000183.1 Protein Homology CDS 38171 38458 . - 0 ID=cds-WP_059740502.1;Parent=gene-LDO38_RS25805;Dbxref=GenBank:WP_059740502.1;Name=WP_059740502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014192893.1;locus_tag=LDO38_RS25805;product=DUF3331 domain-containing protein;protein_id=WP_059740502.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 38991 40241 . + . ID=gene-LDO38_RS25810;Name=LDO38_RS25810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25810;old_locus_tag=BVI2075_780051 NZ_CAJZAL010000183.1 Protein Homology CDS 38991 40241 . + 0 ID=cds-WP_224056694.1;Parent=gene-LDO38_RS25810;Dbxref=GenBank:WP_224056694.1;Name=WP_224056694.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725786.1;locus_tag=LDO38_RS25810;product=sensor histidine kinase;protein_id=WP_224056694.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 40440 41081 . - . ID=gene-LDO38_RS25815;Name=LDO38_RS25815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25815;old_locus_tag=BVI2075_780052 NZ_CAJZAL010000183.1 Protein Homology CDS 40440 41081 . - 0 ID=cds-WP_014725784.1;Parent=gene-LDO38_RS25815;Dbxref=GenBank:WP_014725784.1;Name=WP_014725784.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725784.1;locus_tag=LDO38_RS25815;product=response regulator transcription factor;protein_id=WP_014725784.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 41626 42579 . - . ID=gene-LDO38_RS25820;Name=LDO38_RS25820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25820;old_locus_tag=BVI2075_780054 NZ_CAJZAL010000183.1 Protein Homology CDS 41626 42579 . - 0 ID=cds-WP_034192791.1;Parent=gene-LDO38_RS25820;Dbxref=GenBank:WP_034192791.1;Name=WP_034192791.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414930.1;locus_tag=LDO38_RS25820;product=GlxA family transcriptional regulator;protein_id=WP_034192791.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 42973 43632 . + . ID=gene-LDO38_RS25830;Name=LDO38_RS25830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25830;old_locus_tag=BVI2075_780055 NZ_CAJZAL010000183.1 Protein Homology CDS 42973 43632 . + 0 ID=cds-WP_014725781.1;Parent=gene-LDO38_RS25830;Dbxref=GenBank:WP_014725781.1;Name=WP_014725781.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725781.1;locus_tag=LDO38_RS25830;product=carbonic anhydrase;protein_id=WP_014725781.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 43774 44343 . - . ID=gene-LDO38_RS25835;Name=LDO38_RS25835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25835;old_locus_tag=BVI2075_780057 NZ_CAJZAL010000183.1 Protein Homology CDS 43774 44343 . - 0 ID=cds-WP_176321614.1;Parent=gene-LDO38_RS25835;Dbxref=GenBank:WP_176321614.1;Name=WP_176321614.1;Ontology_term=GO:0006950,GO:0008289,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=lipid binding|0008289||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725780.1;locus_tag=LDO38_RS25835;product=lipocalin family protein;protein_id=WP_176321614.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 44586 45197 . + . ID=gene-LDO38_RS25840;Name=LDO38_RS25840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25840;old_locus_tag=BVI2075_780058 NZ_CAJZAL010000183.1 Protein Homology CDS 44586 45197 . + 0 ID=cds-WP_014725779.1;Parent=gene-LDO38_RS25840;Dbxref=GenBank:WP_014725779.1;Name=WP_014725779.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725779.1;locus_tag=LDO38_RS25840;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_014725779.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 45194 45925 . + . ID=gene-LDO38_RS25845;Name=LDO38_RS25845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25845;old_locus_tag=BVI2075_780059 NZ_CAJZAL010000183.1 Protein Homology CDS 45194 45925 . + 0 ID=cds-WP_212158994.1;Parent=gene-LDO38_RS25845;Dbxref=GenBank:WP_212158994.1;Name=WP_212158994.1;Ontology_term=GO:0006417,GO:0016989,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sigma factor antagonist activity|0016989||IEA;go_process=regulation of translation|0006417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880045.1;locus_tag=LDO38_RS25845;product=anti-sigma factor;protein_id=WP_212158994.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 46081 46911 . + . ID=gene-LDO38_RS25850;Name=LDO38_RS25850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25850;old_locus_tag=BVI2075_780060 NZ_CAJZAL010000183.1 Protein Homology CDS 46081 46911 . + 0 ID=cds-WP_224056695.1;Parent=gene-LDO38_RS25850;Dbxref=GenBank:WP_224056695.1;Name=WP_224056695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880044.1;locus_tag=LDO38_RS25850;product=DUF1295 domain-containing protein;protein_id=WP_224056695.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 46911 48011 . + . ID=gene-LDO38_RS25855;Name=LDO38_RS25855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25855;old_locus_tag=BVI2075_780061 NZ_CAJZAL010000183.1 Protein Homology CDS 46911 48011 . + 0 ID=cds-WP_224056696.1;Parent=gene-LDO38_RS25855;Dbxref=GenBank:WP_224056696.1;Name=WP_224056696.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218186.1;locus_tag=LDO38_RS25855;product=SAM-dependent methyltransferase;protein_id=WP_224056696.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 48020 48628 . + . ID=gene-LDO38_RS25860;Name=LDO38_RS25860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25860;old_locus_tag=BVI2075_780062 NZ_CAJZAL010000183.1 Protein Homology CDS 48020 48628 . + 0 ID=cds-WP_014725775.1;Parent=gene-LDO38_RS25860;Dbxref=GenBank:WP_014725775.1;Name=WP_014725775.1;Ontology_term=GO:0006950,GO:0008289,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=lipid binding|0008289||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725775.1;locus_tag=LDO38_RS25860;product=lipocalin family protein;protein_id=WP_014725775.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 48721 50031 . + . ID=gene-LDO38_RS25865;Name=LDO38_RS25865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25865;old_locus_tag=BVI2075_780063 NZ_CAJZAL010000183.1 Protein Homology CDS 48721 50031 . + 0 ID=cds-WP_014725774.1;Parent=gene-LDO38_RS25865;Dbxref=GenBank:WP_014725774.1;Name=WP_014725774.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725774.1;locus_tag=LDO38_RS25865;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_014725774.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 50028 50882 . + . ID=gene-LDO38_RS25870;Name=LDO38_RS25870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25870;old_locus_tag=BVI2075_780064 NZ_CAJZAL010000183.1 Protein Homology CDS 50028 50882 . + 0 ID=cds-WP_224056697.1;Parent=gene-LDO38_RS25870;Dbxref=GenBank:WP_224056697.1;Name=WP_224056697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725773.1;locus_tag=LDO38_RS25870;product=DUF1365 domain-containing protein;protein_id=WP_224056697.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 50879 52096 . + . ID=gene-LDO38_RS25875;Name=LDO38_RS25875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25875;old_locus_tag=BVI2075_780065 NZ_CAJZAL010000183.1 Protein Homology CDS 50879 52096 . + 0 ID=cds-WP_059740453.1;Parent=gene-LDO38_RS25875;Dbxref=GenBank:WP_059740453.1;Name=WP_059740453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725772.1;locus_tag=LDO38_RS25875;product=SAM-dependent methyltransferase;protein_id=WP_059740453.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 52098 52634 . + . ID=gene-LDO38_RS25880;Name=LDO38_RS25880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25880;old_locus_tag=BVI2075_780066 NZ_CAJZAL010000183.1 Protein Homology CDS 52098 52634 . + 0 ID=cds-WP_034192799.1;Parent=gene-LDO38_RS25880;Dbxref=GenBank:WP_034192799.1;Name=WP_034192799.1;Ontology_term=GO:0016872;gbkey=CDS;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725771.1;locus_tag=LDO38_RS25880;product=chalcone isomerase family protein;protein_id=WP_034192799.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 52729 52899 . + . ID=gene-LDO38_RS25885;Name=LDO38_RS25885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25885 NZ_CAJZAL010000183.1 Protein Homology CDS 52729 52899 . + 0 ID=cds-WP_081053388.1;Parent=gene-LDO38_RS25885;Dbxref=GenBank:WP_081053388.1;Name=WP_081053388.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021526.6;locus_tag=LDO38_RS25885;product=DUF2256 domain-containing protein;protein_id=WP_081053388.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 52936 53124 . - . ID=gene-LDO38_RS25890;Name=LDO38_RS25890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25890 NZ_CAJZAL010000183.1 GeneMarkS-2+ CDS 52936 53124 . - 0 ID=cds-WP_146125842.1;Parent=gene-LDO38_RS25890;Dbxref=GenBank:WP_146125842.1;Name=WP_146125842.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS25890;product=hypothetical protein;protein_id=WP_146125842.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 53442 54239 . + . ID=gene-LDO38_RS25895;Name=LDO38_RS25895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25895;old_locus_tag=BVI2075_780068 NZ_CAJZAL010000183.1 Protein Homology CDS 53442 54239 . + 0 ID=cds-WP_224056698.1;Parent=gene-LDO38_RS25895;Dbxref=GenBank:WP_224056698.1;Name=WP_224056698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725770.1;locus_tag=LDO38_RS25895;product=MerR family transcriptional regulator;protein_id=WP_224056698.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 54333 55064 . + . ID=gene-LDO38_RS25900;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=LDO38_RS25900;old_locus_tag=BVI2075_780069 NZ_CAJZAL010000183.1 Protein Homology CDS 54333 55064 . + 0 ID=cds-WP_034192801.1;Parent=gene-LDO38_RS25900;Dbxref=GenBank:WP_034192801.1;Name=WP_034192801.1;Ontology_term=GO:0042559,GO:0046654,GO:0003934,GO:0005525,GO:0008270;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA,GTP binding|0005525||IEA,zinc ion binding|0008270||IEA;go_process=pteridine-containing compound biosynthetic process|0042559||IEA,tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880035.1;locus_tag=LDO38_RS25900;product=GTP cyclohydrolase I;protein_id=WP_034192801.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 55178 55885 . + . ID=gene-LDO38_RS25905;Name=LDO38_RS25905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25905;old_locus_tag=BVI2075_780070 NZ_CAJZAL010000183.1 Protein Homology CDS 55178 55885 . + 0 ID=cds-WP_176321604.1;Parent=gene-LDO38_RS25905;Dbxref=GenBank:WP_176321604.1;Name=WP_176321604.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725769.1;locus_tag=LDO38_RS25905;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_176321604.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 55983 57029 . + . ID=gene-LDO38_RS25910;Name=LDO38_RS25910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25910;old_locus_tag=BVI2075_780071 NZ_CAJZAL010000183.1 Protein Homology CDS 55983 57029 . + 0 ID=cds-WP_224056699.1;Parent=gene-LDO38_RS25910;Dbxref=GenBank:WP_224056699.1;Name=WP_224056699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725768.1;locus_tag=LDO38_RS25910;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_224056699.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 57222 58751 . - . ID=gene-LDO38_RS25915;Name=LDO38_RS25915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25915;old_locus_tag=BVI2075_780072 NZ_CAJZAL010000183.1 Protein Homology CDS 57222 58751 . - 0 ID=cds-WP_224056700.1;Parent=gene-LDO38_RS25915;Dbxref=GenBank:WP_224056700.1;Name=WP_224056700.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424528.1;locus_tag=LDO38_RS25915;product=cryptochrome/photolyase family protein;protein_id=WP_224056700.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 58818 58976 . - . ID=gene-LDO38_RS25920;Name=LDO38_RS25920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25920 NZ_CAJZAL010000183.1 GeneMarkS-2+ CDS 58818 58976 . - 0 ID=cds-WP_155624637.1;Parent=gene-LDO38_RS25920;Dbxref=GenBank:WP_155624637.1;Name=WP_155624637.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS25920;product=hypothetical protein;protein_id=WP_155624637.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 59003 59974 . + . ID=gene-LDO38_RS25925;Name=LDO38_RS25925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25925;old_locus_tag=BVI2075_780073 NZ_CAJZAL010000183.1 Protein Homology CDS 59003 59974 . + 0 ID=cds-WP_059457466.1;Parent=gene-LDO38_RS25925;Dbxref=GenBank:WP_059457466.1;Name=WP_059457466.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880031.1;locus_tag=LDO38_RS25925;product=MerR family transcriptional regulator;protein_id=WP_059457466.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 60081 61040 . - . ID=gene-LDO38_RS25930;Name=LDO38_RS25930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25930;old_locus_tag=BVI2075_780074 NZ_CAJZAL010000183.1 Protein Homology CDS 60081 61040 . - 0 ID=cds-WP_224056701.1;Parent=gene-LDO38_RS25930;Dbxref=GenBank:WP_224056701.1;Name=WP_224056701.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725764.1;locus_tag=LDO38_RS25930;product=alpha/beta hydrolase;protein_id=WP_224056701.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 61507 63024 . + . ID=gene-LDO38_RS25935;Name=LDO38_RS25935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25935;old_locus_tag=BVI2075_780075 NZ_CAJZAL010000183.1 Protein Homology CDS 61507 63024 . + 0 ID=cds-WP_014725762.1;Parent=gene-LDO38_RS25935;Dbxref=GenBank:WP_014725762.1;Name=WP_014725762.1;Ontology_term=GO:0006281,GO:0003677,GO:0003913,GO:0050660;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA photolyase activity|0003913||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880029.1;locus_tag=LDO38_RS25935;product=cryptochrome/photolyase family protein;protein_id=WP_014725762.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 63094 63864 . - . ID=gene-LDO38_RS25940;Name=LDO38_RS25940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25940;old_locus_tag=BVI2075_780076 NZ_CAJZAL010000183.1 Protein Homology CDS 63094 63864 . - 0 ID=cds-WP_014725761.1;Parent=gene-LDO38_RS25940;Dbxref=GenBank:WP_014725761.1;Name=WP_014725761.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725761.1;locus_tag=LDO38_RS25940;product=class I SAM-dependent methyltransferase;protein_id=WP_014725761.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 64183 64503 . + . ID=gene-LDO38_RS25945;Name=LDO38_RS25945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25945;old_locus_tag=BVI2075_780078 NZ_CAJZAL010000183.1 Protein Homology CDS 64183 64503 . + 0 ID=cds-WP_014725760.1;Parent=gene-LDO38_RS25945;Dbxref=GenBank:WP_014725760.1;Name=WP_014725760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349774.1;locus_tag=LDO38_RS25945;product=hypothetical protein;protein_id=WP_014725760.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 64644 65648 . - . ID=gene-LDO38_RS25950;Name=LDO38_RS25950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25950;old_locus_tag=BVI2075_780079 NZ_CAJZAL010000183.1 Protein Homology CDS 64644 65648 . - 0 ID=cds-WP_060122326.1;Parent=gene-LDO38_RS25950;Dbxref=GenBank:WP_060122326.1;Name=WP_060122326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399019.1;locus_tag=LDO38_RS25950;product=SDR family oxidoreductase;protein_id=WP_060122326.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 65743 66009 . - . ID=gene-LDO38_RS25955;Name=LDO38_RS25955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25955;old_locus_tag=BVI2075_780080 NZ_CAJZAL010000183.1 Protein Homology CDS 65743 66009 . - 0 ID=cds-WP_224056702.1;Parent=gene-LDO38_RS25955;Dbxref=GenBank:WP_224056702.1;Name=WP_224056702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413431.1;locus_tag=LDO38_RS25955;product=hypothetical protein;protein_id=WP_224056702.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 66375 68576 . + . ID=gene-LDO38_RS25960;Name=LDO38_RS25960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25960;old_locus_tag=BVI2075_780082 NZ_CAJZAL010000183.1 Protein Homology CDS 66375 68576 . + 0 ID=cds-WP_224056704.1;Parent=gene-LDO38_RS25960;Dbxref=GenBank:WP_224056704.1;Name=WP_224056704.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372574.1;locus_tag=LDO38_RS25960;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_224056704.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 68592 68786 . + . ID=gene-LDO38_RS25965;Name=LDO38_RS25965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25965;old_locus_tag=BVI2075_780083 NZ_CAJZAL010000183.1 GeneMarkS-2+ CDS 68592 68786 . + 0 ID=cds-WP_060081294.1;Parent=gene-LDO38_RS25965;Dbxref=GenBank:WP_060081294.1;Name=WP_060081294.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS25965;product=hypothetical protein;protein_id=WP_060081294.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 68993 69262 . - . ID=gene-LDO38_RS25970;Name=LDO38_RS25970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25970;old_locus_tag=BVI2075_780084 NZ_CAJZAL010000183.1 Protein Homology CDS 68993 69262 . - 0 ID=cds-WP_059897229.1;Parent=gene-LDO38_RS25970;Dbxref=GenBank:WP_059897229.1;Name=WP_059897229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725753.1;locus_tag=LDO38_RS25970;product=DUF2934 domain-containing protein;protein_id=WP_059897229.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 69290 69715 . - . ID=gene-LDO38_RS25975;Name=LDO38_RS25975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25975;old_locus_tag=BVI2075_780085 NZ_CAJZAL010000183.1 Protein Homology CDS 69290 69715 . - 0 ID=cds-WP_014725752.1;Parent=gene-LDO38_RS25975;Dbxref=GenBank:WP_014725752.1;Name=WP_014725752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481271.1;locus_tag=LDO38_RS25975;product=CBS domain-containing protein;protein_id=WP_014725752.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 69779 70489 . - . ID=gene-LDO38_RS25980;Name=LDO38_RS25980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25980;old_locus_tag=BVI2075_780086 NZ_CAJZAL010000183.1 Protein Homology CDS 69779 70489 . - 0 ID=cds-WP_212173422.1;Parent=gene-LDO38_RS25980;Dbxref=GenBank:WP_212173422.1;Name=WP_212173422.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661407.1;locus_tag=LDO38_RS25980;product=MgtC/SapB family protein;protein_id=WP_212173422.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq pseudogene 70799 71175 . + . ID=gene-LDO38_RS25985;Name=LDO38_RS25985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS25985;partial=true;pseudo=true;start_range=.,70799 NZ_CAJZAL010000183.1 Protein Homology CDS 70799 71175 . + 0 ID=cds-LDO38_RS25985;Parent=gene-LDO38_RS25985;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880020.1;locus_tag=LDO38_RS25985;partial=true;product=nitric oxide dioxygenase;pseudo=true;start_range=.,70799;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 71486 71770 . + . ID=gene-LDO38_RS25990;Name=LDO38_RS25990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25990;old_locus_tag=BVI2075_780090 NZ_CAJZAL010000183.1 Protein Homology CDS 71486 71770 . + 0 ID=cds-WP_011880019.1;Parent=gene-LDO38_RS25990;Dbxref=GenBank:WP_011880019.1;Name=WP_011880019.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880019.1;locus_tag=LDO38_RS25990;product=helix-turn-helix domain-containing protein;protein_id=WP_011880019.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 71760 73064 . + . ID=gene-LDO38_RS25995;Name=LDO38_RS25995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS25995;old_locus_tag=BVI2075_780091 NZ_CAJZAL010000183.1 Protein Homology CDS 71760 73064 . + 0 ID=cds-WP_060081292.1;Parent=gene-LDO38_RS25995;Dbxref=GenBank:WP_060081292.1;Name=WP_060081292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489158.1;locus_tag=LDO38_RS25995;product=HipA domain-containing protein;protein_id=WP_060081292.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 73284 73496 . - . ID=gene-LDO38_RS26000;Name=LDO38_RS26000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26000;old_locus_tag=BVI2075_780092 NZ_CAJZAL010000183.1 Protein Homology CDS 73284 73496 . - 0 ID=cds-WP_011880017.1;Parent=gene-LDO38_RS26000;Dbxref=GenBank:WP_011880017.1;Name=WP_011880017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489184.1;locus_tag=LDO38_RS26000;product=twin transmembrane helix small protein;protein_id=WP_011880017.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 73493 73843 . - . ID=gene-LDO38_RS26005;Name=LDO38_RS26005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26005;old_locus_tag=BVI2075_780093 NZ_CAJZAL010000183.1 Protein Homology CDS 73493 73843 . - 0 ID=cds-WP_059463649.1;Parent=gene-LDO38_RS26005;Dbxref=GenBank:WP_059463649.1;Name=WP_059463649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489163.1;locus_tag=LDO38_RS26005;product=hypothetical protein;protein_id=WP_059463649.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 74145 74903 . + . ID=gene-LDO38_RS26010;Name=LDO38_RS26010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26010;old_locus_tag=BVI2075_780094 NZ_CAJZAL010000183.1 Protein Homology CDS 74145 74903 . + 0 ID=cds-WP_011880015.1;Parent=gene-LDO38_RS26010;Dbxref=GenBank:WP_011880015.1;Name=WP_011880015.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661419.1;locus_tag=LDO38_RS26010;product=YoaK family protein;protein_id=WP_011880015.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 74977 75165 . + . ID=gene-LDO38_RS26015;Name=LDO38_RS26015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26015;old_locus_tag=BVI2075_780095 NZ_CAJZAL010000183.1 Protein Homology CDS 74977 75165 . + 0 ID=cds-WP_011880014.1;Parent=gene-LDO38_RS26015;Dbxref=GenBank:WP_011880014.1;Name=WP_011880014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880014.1;locus_tag=LDO38_RS26015;product=CopG family transcriptional regulator;protein_id=WP_011880014.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 75206 76042 . - . ID=gene-LDO38_RS26020;Name=LDO38_RS26020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26020;old_locus_tag=BVI2075_780096 NZ_CAJZAL010000183.1 Protein Homology CDS 75206 76042 . - 0 ID=cds-WP_034192815.1;Parent=gene-LDO38_RS26020;Dbxref=GenBank:WP_034192815.1;Name=WP_034192815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752902.1;locus_tag=LDO38_RS26020;product=spermidine synthase;protein_id=WP_034192815.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 76085 76429 . - . ID=gene-LDO38_RS26025;Name=LDO38_RS26025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26025;old_locus_tag=BVI2075_780097 NZ_CAJZAL010000183.1 Protein Homology CDS 76085 76429 . - 0 ID=cds-WP_014725746.1;Parent=gene-LDO38_RS26025;Dbxref=GenBank:WP_014725746.1;Name=WP_014725746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893416.1;locus_tag=LDO38_RS26025;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_014725746.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 76769 77032 . + . ID=gene-LDO38_RS26030;Name=LDO38_RS26030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26030;old_locus_tag=BVI2075_780098 NZ_CAJZAL010000183.1 Protein Homology CDS 76769 77032 . + 0 ID=cds-WP_034192816.1;Parent=gene-LDO38_RS26030;Dbxref=GenBank:WP_034192816.1;Name=WP_034192816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761327.1;locus_tag=LDO38_RS26030;product=HPr family phosphocarrier protein;protein_id=WP_034192816.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 77097 77321 . + . ID=gene-LDO38_RS26035;Name=LDO38_RS26035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26035;old_locus_tag=BVI2075_780099 NZ_CAJZAL010000183.1 Protein Homology CDS 77097 77321 . + 0 ID=cds-WP_011880010.1;Parent=gene-LDO38_RS26035;Dbxref=GenBank:WP_011880010.1;Name=WP_011880010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336703.1;locus_tag=LDO38_RS26035;product=hypothetical protein;protein_id=WP_011880010.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq gene 77711 78265 . + . ID=gene-LDO38_RS26040;Name=LDO38_RS26040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26040;old_locus_tag=BVI2075_780100 NZ_CAJZAL010000183.1 Protein Homology CDS 77711 78265 . + 0 ID=cds-WP_014725743.1;Parent=gene-LDO38_RS26040;Dbxref=GenBank:WP_014725743.1;Name=WP_014725743.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725743.1;locus_tag=LDO38_RS26040;product=GNAT family N-acetyltransferase;protein_id=WP_014725743.1;transl_table=11 NZ_CAJZAL010000183.1 RefSeq pseudogene 78276 78539 . - . ID=gene-LDO38_RS26045;Name=LDO38_RS26045;end_range=78539,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS26045;partial=true;pseudo=true NZ_CAJZAL010000183.1 Protein Homology CDS 78276 78539 . - 0 ID=cds-LDO38_RS26045;Parent=gene-LDO38_RS26045;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=78539,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661426.1;locus_tag=LDO38_RS26045;partial=true;product=efflux transporter outer membrane subunit;pseudo=true;transl_table=11 NZ_CAJZAL010000183.1 RefSeq pseudogene 78496 79124 . - . ID=gene-LDO38_RS26050;Name=LDO38_RS26050;end_range=79124,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS26050;partial=true;pseudo=true;start_range=.,78496 NZ_CAJZAL010000183.1 Protein Homology CDS 78496 79124 . - 1 ID=cds-LDO38_RS26050;Parent=gene-LDO38_RS26050;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=79124,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405156.1;locus_tag=LDO38_RS26050;partial=true;product=biotin/lipoyl-binding protein;pseudo=true;start_range=.,78496;transl_table=11 ##sequence-region NZ_CAJZAL010000184.1 1 25405 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000184.1 RefSeq region 1 25405 . + . ID=NZ_CAJZAL010000184.1:1..25405;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_79 NZ_CAJZAL010000184.1 RefSeq gene 1 405 . + . ID=gene-LDO38_RS26055;Name=LDO38_RS26055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26055;old_locus_tag=BVI2075_790001;partial=true;start_range=.,1 NZ_CAJZAL010000184.1 Protein Homology CDS 1 405 . + 0 ID=cds-WP_224056705.1;Parent=gene-LDO38_RS26055;Dbxref=GenBank:WP_224056705.1;Name=WP_224056705.1;Ontology_term=GO:0018580;gbkey=CDS;go_function=nitronate monooxygenase activity|0018580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546697.1;locus_tag=LDO38_RS26055;partial=true;product=nitronate monooxygenase;protein_id=WP_224056705.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq gene 896 2038 . + . ID=gene-LDO38_RS26060;Name=LDO38_RS26060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26060;old_locus_tag=BVI2075_790003 NZ_CAJZAL010000184.1 Protein Homology CDS 896 2038 . + 0 ID=cds-WP_011882928.1;Parent=gene-LDO38_RS26060;Dbxref=GenBank:WP_011882928.1;Name=WP_011882928.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195762.1;locus_tag=LDO38_RS26060;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_011882928.1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq gene 2123 3337 . - . ID=gene-LDO38_RS26065;Name=LDO38_RS26065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26065;old_locus_tag=BVI2075_790004 NZ_CAJZAL010000184.1 Protein Homology CDS 2123 3337 . - 0 ID=cds-WP_059568074.1;Parent=gene-LDO38_RS26065;Dbxref=GenBank:WP_059568074.1;Name=WP_059568074.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753864.1;locus_tag=LDO38_RS26065;product=MFS transporter;protein_id=WP_059568074.1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq gene 3653 4330 . + . ID=gene-LDO38_RS26070;Name=LDO38_RS26070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26070;old_locus_tag=BVI2075_790005 NZ_CAJZAL010000184.1 Protein Homology CDS 3653 4330 . + 0 ID=cds-WP_059462775.1;Parent=gene-LDO38_RS26070;Dbxref=GenBank:WP_059462775.1;Name=WP_059462775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722247.1;locus_tag=LDO38_RS26070;product=HugZ family protein;protein_id=WP_059462775.1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq gene 4678 4971 . + . ID=gene-LDO38_RS26075;Name=LDO38_RS26075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26075;old_locus_tag=BVI2075_790006 NZ_CAJZAL010000184.1 Protein Homology CDS 4678 4971 . + 0 ID=cds-WP_011882931.1;Parent=gene-LDO38_RS26075;Dbxref=GenBank:WP_011882931.1;Name=WP_011882931.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696300.1;locus_tag=LDO38_RS26075;product=H-NS histone family protein;protein_id=WP_011882931.1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq gene 5208 6365 . + . ID=gene-LDO38_RS26080;Name=LDO38_RS26080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26080;old_locus_tag=BVI2075_790007 NZ_CAJZAL010000184.1 Protein Homology CDS 5208 6365 . + 0 ID=cds-WP_043290652.1;Parent=gene-LDO38_RS26080;Dbxref=GenBank:WP_043290652.1;Name=WP_043290652.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212529.1;locus_tag=LDO38_RS26080;product=cation diffusion facilitator family transporter;protein_id=WP_043290652.1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq gene 6393 6863 . - . ID=gene-LDO38_RS26085;Name=LDO38_RS26085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26085;old_locus_tag=BVI2075_790008 NZ_CAJZAL010000184.1 Protein Homology CDS 6393 6863 . - 0 ID=cds-WP_011882933.1;Parent=gene-LDO38_RS26085;Dbxref=GenBank:WP_011882933.1;Name=WP_011882933.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016346759.1;locus_tag=LDO38_RS26085;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011882933.1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq gene 6943 7602 . - . ID=gene-LDO38_RS26090;Name=LDO38_RS26090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26090;old_locus_tag=BVI2075_790009 NZ_CAJZAL010000184.1 Protein Homology CDS 6943 7602 . - 0 ID=cds-WP_011882934.1;Parent=gene-LDO38_RS26090;Dbxref=GenBank:WP_011882934.1;Name=WP_011882934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895588.1;locus_tag=LDO38_RS26090;product=exonuclease;protein_id=WP_011882934.1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq gene 7599 8243 . - . ID=gene-LDO38_RS26095;Name=LDO38_RS26095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26095;old_locus_tag=BVI2075_790010 NZ_CAJZAL010000184.1 Protein Homology CDS 7599 8243 . - 0 ID=cds-WP_011882935.1;Parent=gene-LDO38_RS26095;Dbxref=GenBank:WP_011882935.1;Name=WP_011882935.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010107034.1;locus_tag=LDO38_RS26095;product=MBL fold metallo-hydrolase;protein_id=WP_011882935.1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq gene 8901 9512 . + . ID=gene-LDO38_RS26100;Name=LDO38_RS26100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26100;old_locus_tag=BVI2075_790011 NZ_CAJZAL010000184.1 Protein Homology CDS 8901 9512 . + 0 ID=cds-WP_014722250.1;Parent=gene-LDO38_RS26100;Dbxref=GenBank:WP_014722250.1;Name=WP_014722250.1;Ontology_term=GO:0071555,GO:0008932;gbkey=CDS;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401362.1;locus_tag=LDO38_RS26100;product=septal ring lytic transglycosylase RlpA family protein;protein_id=WP_014722250.1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq gene 9634 10512 . - . ID=gene-LDO38_RS26105;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=LDO38_RS26105;old_locus_tag=BVI2075_790012 NZ_CAJZAL010000184.1 Protein Homology CDS 9634 10512 . - 0 ID=cds-WP_011882937.1;Parent=gene-LDO38_RS26105;Dbxref=GenBank:WP_011882937.1;Name=WP_011882937.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882937.1;locus_tag=LDO38_RS26105;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_011882937.1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq gene 10559 10987 . + . ID=gene-LDO38_RS26110;Name=LDO38_RS26110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26110;old_locus_tag=BVI2075_790013 NZ_CAJZAL010000184.1 Protein Homology CDS 10559 10987 . + 0 ID=cds-WP_011882938.1;Parent=gene-LDO38_RS26110;Dbxref=GenBank:WP_011882938.1;Name=WP_011882938.1;Ontology_term=GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546685.1;locus_tag=LDO38_RS26110;product=YraN family protein;protein_id=WP_011882938.1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq gene 11114 11698 . + . ID=gene-LDO38_RS26115;Name=LDO38_RS26115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26115;old_locus_tag=BVI2075_790014 NZ_CAJZAL010000184.1 Protein Homology CDS 11114 11698 . + 0 ID=cds-WP_011882939.1;Parent=gene-LDO38_RS26115;Dbxref=GenBank:WP_011882939.1;Name=WP_011882939.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493587.1;locus_tag=LDO38_RS26115;product=SIS domain-containing protein;protein_id=WP_011882939.1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq gene 11716 12513 . + . ID=gene-LDO38_RS26120;Name=LDO38_RS26120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26120;old_locus_tag=BVI2075_790016 NZ_CAJZAL010000184.1 Protein Homology CDS 11716 12513 . + 0 ID=cds-WP_011882940.1;Parent=gene-LDO38_RS26120;Dbxref=GenBank:WP_011882940.1;Name=WP_011882940.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212533.1;locus_tag=LDO38_RS26120;product=BON domain-containing protein;protein_id=WP_011882940.1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq gene 12510 12866 . + . ID=gene-LDO38_RS26125;Name=LDO38_RS26125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26125;old_locus_tag=BVI2075_790015 NZ_CAJZAL010000184.1 Protein Homology CDS 12510 12866 . + 0 ID=cds-WP_011882941.1;Parent=gene-LDO38_RS26125;Dbxref=GenBank:WP_011882941.1;Name=WP_011882941.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753795.1;locus_tag=LDO38_RS26125;product=c-type cytochrome;protein_id=WP_011882941.1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq gene 12932 13007 . + . ID=gene-LDO38_RS26130;Name=LDO38_RS26130;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS26130;old_locus_tag=BVI2075_TRNA24 NZ_CAJZAL010000184.1 tRNAscan-SE tRNA 12932 13007 . + . ID=rna-LDO38_RS26130;Parent=gene-LDO38_RS26130;anticodon=(pos:12965..12967);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS26130;product=tRNA-Ala NZ_CAJZAL010000184.1 tRNAscan-SE exon 12932 13007 . + . ID=exon-LDO38_RS26130-1;Parent=rna-LDO38_RS26130;anticodon=(pos:12965..12967);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS26130;product=tRNA-Ala NZ_CAJZAL010000184.1 RefSeq gene 13082 14476 . - . ID=gene-LDO38_RS26135;Name=LDO38_RS26135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26135;old_locus_tag=BVI2075_790017 NZ_CAJZAL010000184.1 Protein Homology CDS 13082 14476 . - 0 ID=cds-WP_011882963.1;Parent=gene-LDO38_RS26135;Dbxref=GenBank:WP_011882963.1;Name=WP_011882963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882963.1;locus_tag=LDO38_RS26135;product=enolase C-terminal domain-like protein;protein_id=WP_011882963.1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq gene 14544 15884 . - . ID=gene-LDO38_RS26140;Name=LDO38_RS26140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26140;old_locus_tag=BVI2075_790018 NZ_CAJZAL010000184.1 Protein Homology CDS 14544 15884 . - 0 ID=cds-WP_011882964.1;Parent=gene-LDO38_RS26140;Dbxref=GenBank:WP_011882964.1;Name=WP_011882964.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401343.1;locus_tag=LDO38_RS26140;product=MFS transporter;protein_id=WP_011882964.1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq gene 16134 16763 . + . ID=gene-LDO38_RS26145;Name=LDO38_RS26145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26145;old_locus_tag=BVI2075_790019 NZ_CAJZAL010000184.1 Protein Homology CDS 16134 16763 . + 0 ID=cds-WP_011882965.1;Parent=gene-LDO38_RS26145;Dbxref=GenBank:WP_011882965.1;Name=WP_011882965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882965.1;locus_tag=LDO38_RS26145;product=DUF2239 family protein;protein_id=WP_011882965.1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq gene 16780 18111 . + . ID=gene-LDO38_RS26150;Name=LDO38_RS26150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26150;old_locus_tag=BVI2075_790020 NZ_CAJZAL010000184.1 Protein Homology CDS 16780 18111 . + 0 ID=cds-WP_045579417.1;Parent=gene-LDO38_RS26150;Dbxref=GenBank:WP_045579417.1;Name=WP_045579417.1;Ontology_term=GO:0006720,GO:0016702,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of two atoms of oxygen|0016702||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid metabolic process|0006720||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722256.1;locus_tag=LDO38_RS26150;product=carotenoid oxygenase family protein;protein_id=WP_045579417.1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq gene 18136 19302 . - . ID=gene-LDO38_RS26155;Name=LDO38_RS26155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26155;old_locus_tag=BVI2075_790021 NZ_CAJZAL010000184.1 Protein Homology CDS 18136 19302 . - 0 ID=cds-WP_011882967.1;Parent=gene-LDO38_RS26155;Dbxref=GenBank:WP_011882967.1;Name=WP_011882967.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497436.1;locus_tag=LDO38_RS26155;product=ABC transporter permease;protein_id=WP_011882967.1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq gene 19307 20461 . - . ID=gene-LDO38_RS26160;Name=LDO38_RS26160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26160;old_locus_tag=BVI2075_790022 NZ_CAJZAL010000184.1 Protein Homology CDS 19307 20461 . - 0 ID=cds-WP_011882968.1;Parent=gene-LDO38_RS26160;Dbxref=GenBank:WP_011882968.1;Name=WP_011882968.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546674.1;locus_tag=LDO38_RS26160;product=ABC transporter permease;protein_id=WP_011882968.1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq gene 20480 21178 . - . ID=gene-LDO38_RS26165;Name=LDO38_RS26165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26165;old_locus_tag=BVI2075_790023 NZ_CAJZAL010000184.1 Protein Homology CDS 20480 21178 . - 0 ID=cds-WP_014722258.1;Parent=gene-LDO38_RS26165;Dbxref=GenBank:WP_014722258.1;Name=WP_014722258.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413520.1;locus_tag=LDO38_RS26165;product=ABC transporter ATP-binding protein;protein_id=WP_014722258.1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq gene 21189 22394 . - . ID=gene-LDO38_RS26170;Name=LDO38_RS26170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26170;old_locus_tag=BVI2075_790024 NZ_CAJZAL010000184.1 Protein Homology CDS 21189 22394 . - 0 ID=cds-WP_069246116.1;Parent=gene-LDO38_RS26170;Dbxref=GenBank:WP_069246116.1;Name=WP_069246116.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484502.1;locus_tag=LDO38_RS26170;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_069246116.1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq gene 22759 22992 . + . ID=gene-LDO38_RS26175;Name=LDO38_RS26175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26175;old_locus_tag=BVI2075_790025 NZ_CAJZAL010000184.1 Protein Homology CDS 22759 22992 . + 0 ID=cds-WP_014722260.1;Parent=gene-LDO38_RS26175;Dbxref=GenBank:WP_014722260.1;Name=WP_014722260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327737.1;locus_tag=LDO38_RS26175;product=hypothetical protein;protein_id=WP_014722260.1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq gene 23148 24092 . + . ID=gene-LDO38_RS26180;Name=LDO38_RS26180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26180;old_locus_tag=BVI2075_790026 NZ_CAJZAL010000184.1 Protein Homology CDS 23148 24092 . + 0 ID=cds-WP_224019990.1;Parent=gene-LDO38_RS26180;Dbxref=GenBank:WP_224019990.1;Name=WP_224019990.1;Ontology_term=GO:0016491,GO:0050661,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023775.1;locus_tag=LDO38_RS26180;product=NAD(P)-dependent oxidoreductase;protein_id=WP_224019990.1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq gene 24163 24798 . + . ID=gene-LDO38_RS26185;Name=LDO38_RS26185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26185;old_locus_tag=BVI2075_790027 NZ_CAJZAL010000184.1 Protein Homology CDS 24163 24798 . + 0 ID=cds-WP_224056706.1;Parent=gene-LDO38_RS26185;Dbxref=GenBank:WP_224056706.1;Name=WP_224056706.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757898.1;locus_tag=LDO38_RS26185;product=LysE family translocator;protein_id=WP_224056706.1;transl_table=11 NZ_CAJZAL010000184.1 RefSeq pseudogene 25074 25405 . - . ID=gene-LDO38_RS26190;Name=LDO38_RS26190;end_range=25405,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS26190;old_locus_tag=BVI2075_790028;partial=true;pseudo=true NZ_CAJZAL010000184.1 Protein Homology CDS 25074 25405 . - 2 ID=cds-LDO38_RS26190;Parent=gene-LDO38_RS26190;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=25405,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546667.1;locus_tag=LDO38_RS26190;partial=true;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000185.1 1 137677 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000185.1 RefSeq region 1 137677 . + . ID=NZ_CAJZAL010000185.1:1..137677;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_8 NZ_CAJZAL010000185.1 RefSeq gene 1 643 . - . ID=gene-LDO38_RS26195;Name=LDO38_RS26195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26195;partial=true;start_range=.,1 NZ_CAJZAL010000185.1 Protein Homology CDS 1 643 . - 0 ID=cds-WP_224056707.1;Parent=gene-LDO38_RS26195;Dbxref=GenBank:WP_224056707.1;Name=WP_224056707.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408794.1;locus_tag=LDO38_RS26195;partial=true;product=HAD family hydrolase;protein_id=WP_224056707.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 747 2156 . - . ID=gene-LDO38_RS26200;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=LDO38_RS26200;old_locus_tag=BVI2075_80002 NZ_CAJZAL010000185.1 Protein Homology CDS 747 2156 . - 0 ID=cds-WP_014723457.1;Parent=gene-LDO38_RS26200;Dbxref=GenBank:WP_014723457.1;Name=WP_014723457.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762488.1;locus_tag=LDO38_RS26200;product=argininosuccinate lyase;protein_id=WP_014723457.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 2525 3334 . - . ID=gene-LDO38_RS26205;Name=LDO38_RS26205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26205;old_locus_tag=BVI2075_80003 NZ_CAJZAL010000185.1 Protein Homology CDS 2525 3334 . - 0 ID=cds-WP_011885702.1;Parent=gene-LDO38_RS26205;Dbxref=GenBank:WP_011885702.1;Name=WP_011885702.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492931.1;locus_tag=LDO38_RS26205;product=helix-turn-helix transcriptional regulator;protein_id=WP_011885702.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 3520 4272 . + . ID=gene-LDO38_RS26210;Name=LDO38_RS26210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26210;old_locus_tag=BVI2075_80004 NZ_CAJZAL010000185.1 Protein Homology CDS 3520 4272 . + 0 ID=cds-WP_011885701.1;Parent=gene-LDO38_RS26210;Dbxref=GenBank:WP_011885701.1;Name=WP_011885701.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885701.1;locus_tag=LDO38_RS26210;product=class I SAM-dependent methyltransferase;protein_id=WP_011885701.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 4491 7484 . - . ID=gene-LDO38_RS26215;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=LDO38_RS26215;old_locus_tag=BVI2075_80005 NZ_CAJZAL010000185.1 Protein Homology CDS 4491 7484 . - 0 ID=cds-WP_059460529.1;Parent=gene-LDO38_RS26215;Dbxref=GenBank:WP_059460529.1;Name=WP_059460529.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212910.1;locus_tag=LDO38_RS26215;product=phosphoenolpyruvate carboxylase;protein_id=WP_059460529.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 7694 8695 . + . ID=gene-LDO38_RS26220;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=LDO38_RS26220;old_locus_tag=BVI2075_80006 NZ_CAJZAL010000185.1 Protein Homology CDS 7694 8695 . + 0 ID=cds-WP_011885699.1;Parent=gene-LDO38_RS26220;Dbxref=GenBank:WP_011885699.1;Name=WP_011885699.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193185.1;locus_tag=LDO38_RS26220;product=hydroxymethylbilane synthase;protein_id=WP_011885699.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 8695 10677 . + . ID=gene-LDO38_RS26225;Name=hemDX;gbkey=Gene;gene=hemDX;gene_biotype=protein_coding;locus_tag=LDO38_RS26225;old_locus_tag=BVI2075_80007 NZ_CAJZAL010000185.1 Protein Homology CDS 8695 10677 . + 0 ID=cds-WP_059460530.1;Parent=gene-LDO38_RS26225;Dbxref=GenBank:WP_059460530.1;Name=WP_059460530.1;Ontology_term=GO:0033014,GO:0004852;gbkey=CDS;gene=hemDX;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010114401.1;locus_tag=LDO38_RS26225;product=fused uroporphyrinogen-III synthase HemD/membrane protein HemX;protein_id=WP_059460530.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 10680 11867 . + . ID=gene-LDO38_RS26230;Name=LDO38_RS26230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26230;old_locus_tag=BVI2075_80008 NZ_CAJZAL010000185.1 Protein Homology CDS 10680 11867 . + 0 ID=cds-WP_011885697.1;Parent=gene-LDO38_RS26230;Dbxref=GenBank:WP_011885697.1;Name=WP_011885697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193604.1;locus_tag=LDO38_RS26230;product=heme biosynthesis protein HemY;protein_id=WP_011885697.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 11993 13297 . - . ID=gene-LDO38_RS26235;Name=LDO38_RS26235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26235;old_locus_tag=BVI2075_80009 NZ_CAJZAL010000185.1 Protein Homology CDS 11993 13297 . - 0 ID=cds-WP_059463197.1;Parent=gene-LDO38_RS26235;Dbxref=GenBank:WP_059463197.1;Name=WP_059463197.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753435.1;locus_tag=LDO38_RS26235;product=MFS transporter;protein_id=WP_059463197.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 13432 14190 . - . ID=gene-LDO38_RS26240;Name=LDO38_RS26240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26240;old_locus_tag=BVI2075_80010 NZ_CAJZAL010000185.1 Protein Homology CDS 13432 14190 . - 0 ID=cds-WP_011885695.1;Parent=gene-LDO38_RS26240;Dbxref=GenBank:WP_011885695.1;Name=WP_011885695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543860.1;locus_tag=LDO38_RS26240;product=SDR family oxidoreductase;protein_id=WP_011885695.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 14275 15714 . - . ID=gene-LDO38_RS26245;Name=LDO38_RS26245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26245;old_locus_tag=BVI2075_80011 NZ_CAJZAL010000185.1 Protein Homology CDS 14275 15714 . - 0 ID=cds-WP_011885694.1;Parent=gene-LDO38_RS26245;Dbxref=GenBank:WP_011885694.1;Name=WP_011885694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352864.1;locus_tag=LDO38_RS26245;product=aldehyde dehydrogenase family protein;protein_id=WP_011885694.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 15954 16481 . + . ID=gene-LDO38_RS26250;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=LDO38_RS26250;old_locus_tag=BVI2075_80012 NZ_CAJZAL010000185.1 Protein Homology CDS 15954 16481 . + 0 ID=cds-WP_059621780.1;Parent=gene-LDO38_RS26250;Dbxref=GenBank:WP_059621780.1;Name=WP_059621780.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007587974.1;locus_tag=LDO38_RS26250;product=inorganic diphosphatase;protein_id=WP_059621780.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 16538 17323 . - . ID=gene-LDO38_RS26255;Name=LDO38_RS26255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26255;old_locus_tag=BVI2075_80013 NZ_CAJZAL010000185.1 Protein Homology CDS 16538 17323 . - 0 ID=cds-WP_224056708.1;Parent=gene-LDO38_RS26255;Dbxref=GenBank:WP_224056708.1;Name=WP_224056708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723449.1;locus_tag=LDO38_RS26255;product=GIY-YIG nuclease family protein;protein_id=WP_224056708.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 17404 18582 . - . ID=gene-LDO38_RS26260;Name=LDO38_RS26260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26260;old_locus_tag=BVI2075_80014 NZ_CAJZAL010000185.1 Protein Homology CDS 17404 18582 . - 0 ID=cds-WP_224056709.1;Parent=gene-LDO38_RS26260;Dbxref=GenBank:WP_224056709.1;Name=WP_224056709.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885691.1;locus_tag=LDO38_RS26260;product=GNAT family N-acetyltransferase;protein_id=WP_224056709.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 18691 20403 . + . ID=gene-LDO38_RS26265;Name=LDO38_RS26265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26265;old_locus_tag=BVI2075_80015 NZ_CAJZAL010000185.1 Protein Homology CDS 18691 20403 . + 0 ID=cds-WP_034192593.1;Parent=gene-LDO38_RS26265;Dbxref=GenBank:WP_034192593.1;Name=WP_034192593.1;Ontology_term=GO:0009435,GO:0003952,GO:0005524;gbkey=CDS;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,ATP binding|0005524||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545936.1;locus_tag=LDO38_RS26265;product=NAD+ synthase;protein_id=WP_034192593.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 20496 20834 . + . ID=gene-LDO38_RS26270;Name=LDO38_RS26270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26270;old_locus_tag=BVI2075_80016 NZ_CAJZAL010000185.1 Protein Homology CDS 20496 20834 . + 0 ID=cds-WP_006398637.1;Parent=gene-LDO38_RS26270;Dbxref=GenBank:WP_006398637.1;Name=WP_006398637.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018419771.1;locus_tag=LDO38_RS26270;product=P-II family nitrogen regulator;protein_id=WP_006398637.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 20995 22080 . - . ID=gene-LDO38_RS26275;Name=LDO38_RS26275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26275;old_locus_tag=BVI2075_80017 NZ_CAJZAL010000185.1 Protein Homology CDS 20995 22080 . - 0 ID=cds-WP_011885689.1;Parent=gene-LDO38_RS26275;Dbxref=GenBank:WP_011885689.1;Name=WP_011885689.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398638.1;locus_tag=LDO38_RS26275;product=porin;protein_id=WP_011885689.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 22665 23591 . - . ID=gene-LDO38_RS26280;Name=LDO38_RS26280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26280;old_locus_tag=BVI2075_80019 NZ_CAJZAL010000185.1 Protein Homology CDS 22665 23591 . - 0 ID=cds-WP_069246390.1;Parent=gene-LDO38_RS26280;Dbxref=GenBank:WP_069246390.1;Name=WP_069246390.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753425.1;locus_tag=LDO38_RS26280;product=LysR family transcriptional regulator;protein_id=WP_069246390.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 23728 24225 . + . ID=gene-LDO38_RS26285;Name=LDO38_RS26285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26285;old_locus_tag=BVI2075_80020 NZ_CAJZAL010000185.1 Protein Homology CDS 23728 24225 . + 0 ID=cds-WP_059460536.1;Parent=gene-LDO38_RS26285;Dbxref=GenBank:WP_059460536.1;Name=WP_059460536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212920.1;locus_tag=LDO38_RS26285;product=GNAT family N-acetyltransferase;protein_id=WP_059460536.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 24283 25062 . - . ID=gene-LDO38_RS26290;Name=LDO38_RS26290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26290;old_locus_tag=BVI2075_80021 NZ_CAJZAL010000185.1 Protein Homology CDS 24283 25062 . - 0 ID=cds-WP_034192591.1;Parent=gene-LDO38_RS26290;Dbxref=GenBank:WP_034192591.1;Name=WP_034192591.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896370.1;locus_tag=LDO38_RS26290;product=ABC transporter ATP-binding protein;protein_id=WP_034192591.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 25081 25794 . - . ID=gene-LDO38_RS26295;Name=LDO38_RS26295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26295;old_locus_tag=BVI2075_80022 NZ_CAJZAL010000185.1 Protein Homology CDS 25081 25794 . - 0 ID=cds-WP_059894262.1;Parent=gene-LDO38_RS26295;Dbxref=GenBank:WP_059894262.1;Name=WP_059894262.1;Ontology_term=GO:0022857,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065252.1;locus_tag=LDO38_RS26295;product=ABC transporter permease;protein_id=WP_059894262.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 25791 26480 . - . ID=gene-LDO38_RS26300;Name=LDO38_RS26300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26300;old_locus_tag=BVI2075_80023 NZ_CAJZAL010000185.1 Protein Homology CDS 25791 26480 . - 0 ID=cds-WP_014723444.1;Parent=gene-LDO38_RS26300;Dbxref=GenBank:WP_014723444.1;Name=WP_014723444.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522525.1;locus_tag=LDO38_RS26300;product=ABC transporter permease;protein_id=WP_014723444.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 26720 27496 . - . ID=gene-LDO38_RS26305;Name=LDO38_RS26305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26305;old_locus_tag=BVI2075_80024 NZ_CAJZAL010000185.1 Protein Homology CDS 26720 27496 . - 0 ID=cds-WP_059890393.1;Parent=gene-LDO38_RS26305;Dbxref=GenBank:WP_059890393.1;Name=WP_059890393.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024925.1;locus_tag=LDO38_RS26305;product=ABC transporter substrate-binding protein;protein_id=WP_059890393.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 28004 28552 . - . ID=gene-LDO38_RS26310;Name=LDO38_RS26310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26310;old_locus_tag=BVI2075_80026 NZ_CAJZAL010000185.1 Protein Homology CDS 28004 28552 . - 0 ID=cds-WP_011885682.1;Parent=gene-LDO38_RS26310;Dbxref=GenBank:WP_011885682.1;Name=WP_011885682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497152.1;locus_tag=LDO38_RS26310;product=periplasmic heavy metal sensor;protein_id=WP_011885682.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 28779 29504 . + . ID=gene-LDO38_RS26315;Name=LDO38_RS26315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26315;old_locus_tag=BVI2075_80027 NZ_CAJZAL010000185.1 Protein Homology CDS 28779 29504 . + 0 ID=cds-WP_009693256.1;Parent=gene-LDO38_RS26315;Dbxref=GenBank:WP_009693256.1;Name=WP_009693256.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699030.1;locus_tag=LDO38_RS26315;product=response regulator;protein_id=WP_009693256.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 29488 30804 . + . ID=gene-LDO38_RS26320;Name=LDO38_RS26320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26320;old_locus_tag=BVI2075_80028 NZ_CAJZAL010000185.1 Protein Homology CDS 29488 30804 . + 0 ID=cds-WP_011885681.1;Parent=gene-LDO38_RS26320;Dbxref=GenBank:WP_011885681.1;Name=WP_011885681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694353.1;locus_tag=LDO38_RS26320;product=ATP-binding protein;protein_id=WP_011885681.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 30845 31111 . - . ID=gene-LDO38_RS26325;Name=LDO38_RS26325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26325;old_locus_tag=BVI2075_80029 NZ_CAJZAL010000185.1 Protein Homology CDS 30845 31111 . - 0 ID=cds-WP_011885680.1;Parent=gene-LDO38_RS26325;Dbxref=GenBank:WP_011885680.1;Name=WP_011885680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198606.1;locus_tag=LDO38_RS26325;product=double-stranded DNA-specific endonuclease;protein_id=WP_011885680.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 31616 33373 . + . ID=gene-LDO38_RS26330;Name=LDO38_RS26330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26330;old_locus_tag=BVI2075_80030 NZ_CAJZAL010000185.1 Protein Homology CDS 31616 33373 . + 0 ID=cds-WP_011885679.1;Parent=gene-LDO38_RS26330;Dbxref=GenBank:WP_011885679.1;Name=WP_011885679.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892433.1;locus_tag=LDO38_RS26330;product=ABC transporter permease;protein_id=WP_011885679.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 33446 34083 . + . ID=gene-LDO38_RS26335;Name=LDO38_RS26335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26335;old_locus_tag=BVI2075_80031;partial=true;start_range=.,33446 NZ_CAJZAL010000185.1 Protein Homology CDS 33446 34083 . + 2 ID=cds-WP_224056713.1;Parent=gene-LDO38_RS26335;Dbxref=GenBank:WP_224056713.1;Name=WP_224056713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892432.1;locus_tag=LDO38_RS26335;partial=true;product=AAA-associated domain-containing protein;protein_id=WP_224056713.1;start_range=.,33446;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 34154 34651 . - . ID=gene-LDO38_RS26340;Name=LDO38_RS26340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26340;old_locus_tag=BVI2075_80032 NZ_CAJZAL010000185.1 Protein Homology CDS 34154 34651 . - 0 ID=cds-WP_059668512.1;Parent=gene-LDO38_RS26340;Dbxref=GenBank:WP_059668512.1;Name=WP_059668512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896382.1;locus_tag=LDO38_RS26340;product=hypothetical protein;protein_id=WP_059668512.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 34648 35238 . - . ID=gene-LDO38_RS26345;Name=LDO38_RS26345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26345;old_locus_tag=BVI2075_80033 NZ_CAJZAL010000185.1 Protein Homology CDS 34648 35238 . - 0 ID=cds-WP_224020498.1;Parent=gene-LDO38_RS26345;Dbxref=GenBank:WP_224020498.1;Name=WP_224020498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896383.1;locus_tag=LDO38_RS26345;product=hypothetical protein;protein_id=WP_224020498.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 35487 35684 . + . ID=gene-LDO38_RS26350;Name=LDO38_RS26350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26350;old_locus_tag=BVI2075_80034 NZ_CAJZAL010000185.1 Protein Homology CDS 35487 35684 . + 0 ID=cds-WP_014723439.1;Parent=gene-LDO38_RS26350;Dbxref=GenBank:WP_014723439.1;Name=WP_014723439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896384.1;locus_tag=LDO38_RS26350;product=hypothetical protein;protein_id=WP_014723439.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 35820 37241 . + . ID=gene-LDO38_RS26355;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=LDO38_RS26355;old_locus_tag=BVI2075_80035 NZ_CAJZAL010000185.1 Protein Homology CDS 35820 37241 . + 0 ID=cds-WP_014723438.1;Parent=gene-LDO38_RS26355;Dbxref=GenBank:WP_014723438.1;Name=WP_014723438.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657614.1;locus_tag=LDO38_RS26355;product=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming);protein_id=WP_014723438.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 37234 37812 . + . ID=gene-LDO38_RS26360;Name=LDO38_RS26360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26360;old_locus_tag=BVI2075_80036 NZ_CAJZAL010000185.1 Protein Homology CDS 37234 37812 . + 0 ID=cds-WP_069246287.1;Parent=gene-LDO38_RS26360;Dbxref=GenBank:WP_069246287.1;Name=WP_069246287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761349.1;locus_tag=LDO38_RS26360;product=AAA family ATPase;protein_id=WP_069246287.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 37838 39205 . - . ID=gene-LDO38_RS26365;Name=LDO38_RS26365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26365;old_locus_tag=BVI2075_80037 NZ_CAJZAL010000185.1 Protein Homology CDS 37838 39205 . - 0 ID=cds-WP_041493874.1;Parent=gene-LDO38_RS26365;Dbxref=GenBank:WP_041493874.1;Name=WP_041493874.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545919.1;locus_tag=LDO38_RS26365;product=MFS transporter;protein_id=WP_041493874.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 39391 39771 . - . ID=gene-LDO38_RS26370;Name=LDO38_RS26370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26370;old_locus_tag=BVI2075_80038 NZ_CAJZAL010000185.1 Protein Homology CDS 39391 39771 . - 0 ID=cds-WP_014723435.1;Parent=gene-LDO38_RS26370;Dbxref=GenBank:WP_014723435.1;Name=WP_014723435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723435.1;locus_tag=LDO38_RS26370;product=DUF5594 family protein;protein_id=WP_014723435.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 39890 40276 . + . ID=gene-LDO38_RS26375;Name=LDO38_RS26375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26375;old_locus_tag=BVI2075_80039 NZ_CAJZAL010000185.1 Protein Homology CDS 39890 40276 . + 0 ID=cds-WP_034192585.1;Parent=gene-LDO38_RS26375;Dbxref=GenBank:WP_034192585.1;Name=WP_034192585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364418.1;locus_tag=LDO38_RS26375;product=hypothetical protein;protein_id=WP_034192585.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 40449 40778 . - . ID=gene-LDO38_RS26380;Name=LDO38_RS26380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26380;old_locus_tag=BVI2075_80040 NZ_CAJZAL010000185.1 Protein Homology CDS 40449 40778 . - 0 ID=cds-WP_011885670.1;Parent=gene-LDO38_RS26380;Dbxref=GenBank:WP_011885670.1;Name=WP_011885670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328976.1;locus_tag=LDO38_RS26380;product=hypothetical protein;protein_id=WP_011885670.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 40922 41422 . + . ID=gene-LDO38_RS26385;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=LDO38_RS26385;old_locus_tag=BVI2075_80041 NZ_CAJZAL010000185.1 Protein Homology CDS 40922 41422 . + 0 ID=cds-WP_034192584.1;Parent=gene-LDO38_RS26385;Dbxref=GenBank:WP_034192584.1;Name=WP_034192584.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364416.1;locus_tag=LDO38_RS26385;product=serine protease inhibitor ecotin;protein_id=WP_034192584.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 41692 42027 . + . ID=gene-LDO38_RS26395;Name=LDO38_RS26395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26395 NZ_CAJZAL010000185.1 Protein Homology CDS 41692 42027 . + 0 ID=cds-WP_059568433.1;Parent=gene-LDO38_RS26395;Dbxref=GenBank:WP_059568433.1;Name=WP_059568433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012406506.1;locus_tag=LDO38_RS26395;product=hypothetical protein;protein_id=WP_059568433.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq pseudogene 42034 42321 . - . ID=gene-LDO38_RS26400;Name=LDO38_RS26400;end_range=42321,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS26400;partial=true;pseudo=true;start_range=.,42034 NZ_CAJZAL010000185.1 Protein Homology CDS 42034 42321 . - 0 ID=cds-LDO38_RS26400;Parent=gene-LDO38_RS26400;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=42321,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526387.1;locus_tag=LDO38_RS26400;partial=true;product=integrase;pseudo=true;start_range=.,42034;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 42555 42629 . - . ID=gene-LDO38_RS26405;Name=LDO38_RS26405;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS26405;old_locus_tag=BVI2075_TRNA47 NZ_CAJZAL010000185.1 tRNAscan-SE tRNA 42555 42629 . - . ID=rna-LDO38_RS26405;Parent=gene-LDO38_RS26405;anticodon=(pos:complement(42594..42596));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS26405;product=tRNA-Arg NZ_CAJZAL010000185.1 tRNAscan-SE exon 42555 42629 . - . ID=exon-LDO38_RS26405-1;Parent=rna-LDO38_RS26405;anticodon=(pos:complement(42594..42596));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS26405;product=tRNA-Arg NZ_CAJZAL010000185.1 RefSeq gene 42780 42962 . - . ID=gene-LDO38_RS26410;Name=LDO38_RS26410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26410;old_locus_tag=BVI2075_80046 NZ_CAJZAL010000185.1 Protein Homology CDS 42780 42962 . - 0 ID=cds-WP_011885645.1;Parent=gene-LDO38_RS26410;Dbxref=GenBank:WP_011885645.1;Name=WP_011885645.1;Ontology_term=GO:0043448,GO:0005506,GO:0009055;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=alkane catabolic process|0043448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186320.1;locus_tag=LDO38_RS26410;product=rubredoxin;protein_id=WP_011885645.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 43158 43562 . + . ID=gene-LDO38_RS26415;Name=LDO38_RS26415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26415;old_locus_tag=BVI2075_80048 NZ_CAJZAL010000185.1 Protein Homology CDS 43158 43562 . + 0 ID=cds-WP_059568434.1;Parent=gene-LDO38_RS26415;Dbxref=GenBank:WP_059568434.1;Name=WP_059568434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328968.1;locus_tag=LDO38_RS26415;product=DUF4399 domain-containing protein;protein_id=WP_059568434.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 43808 45757 . + . ID=gene-LDO38_RS26420;Name=LDO38_RS26420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26420;old_locus_tag=BVI2075_80047 NZ_CAJZAL010000185.1 Protein Homology CDS 43808 45757 . + 0 ID=cds-WP_034194018.1;Parent=gene-LDO38_RS26420;Dbxref=GenBank:WP_034194018.1;Name=WP_034194018.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364399.1;locus_tag=LDO38_RS26420;product=ATP-binding cassette domain-containing protein;protein_id=WP_034194018.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 45996 47978 . + . ID=gene-LDO38_RS26425;Name=LDO38_RS26425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26425;old_locus_tag=BVI2075_80049 NZ_CAJZAL010000185.1 Protein Homology CDS 45996 47978 . + 0 ID=cds-WP_011885642.1;Parent=gene-LDO38_RS26425;Dbxref=GenBank:WP_011885642.1;Name=WP_011885642.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254672.1;locus_tag=LDO38_RS26425;product=DNA topoisomerase IV subunit B;protein_id=WP_011885642.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 48047 50368 . + . ID=gene-LDO38_RS26430;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=LDO38_RS26430;old_locus_tag=BVI2075_80050 NZ_CAJZAL010000185.1 Protein Homology CDS 48047 50368 . + 0 ID=cds-WP_011885641.1;Parent=gene-LDO38_RS26430;Dbxref=GenBank:WP_011885641.1;Name=WP_011885641.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892382.1;locus_tag=LDO38_RS26430;product=DNA topoisomerase IV subunit A;protein_id=WP_011885641.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 50628 51086 . + . ID=gene-LDO38_RS26435;Name=LDO38_RS26435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26435;old_locus_tag=BVI2075_80051 NZ_CAJZAL010000185.1 Protein Homology CDS 50628 51086 . + 0 ID=cds-WP_011885640.1;Parent=gene-LDO38_RS26435;Dbxref=GenBank:WP_011885640.1;Name=WP_011885640.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413474.1;locus_tag=LDO38_RS26435;product=CopD family protein;protein_id=WP_011885640.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 51162 52046 . - . ID=gene-LDO38_RS26440;Name=LDO38_RS26440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26440;old_locus_tag=BVI2075_80052 NZ_CAJZAL010000185.1 Protein Homology CDS 51162 52046 . - 0 ID=cds-WP_011885639.1;Parent=gene-LDO38_RS26440;Dbxref=GenBank:WP_011885639.1;Name=WP_011885639.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185890.1;locus_tag=LDO38_RS26440;product=LysR family transcriptional regulator;protein_id=WP_011885639.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 52160 52606 . + . ID=gene-LDO38_RS26445;Name=LDO38_RS26445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26445;old_locus_tag=BVI2075_80053 NZ_CAJZAL010000185.1 Protein Homology CDS 52160 52606 . + 0 ID=cds-WP_011885638.1;Parent=gene-LDO38_RS26445;Dbxref=GenBank:WP_011885638.1;Name=WP_011885638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352815.1;locus_tag=LDO38_RS26445;product=multidrug/biocide efflux PACE transporter;protein_id=WP_011885638.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 52643 53851 . - . ID=gene-LDO38_RS26450;Name=LDO38_RS26450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26450;old_locus_tag=BVI2075_80054 NZ_CAJZAL010000185.1 Protein Homology CDS 52643 53851 . - 0 ID=cds-WP_011885637.1;Parent=gene-LDO38_RS26450;Dbxref=GenBank:WP_011885637.1;Name=WP_011885637.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723428.1;locus_tag=LDO38_RS26450;product=chromate transporter;protein_id=WP_011885637.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 54046 56385 . - . ID=gene-LDO38_RS26455;Name=LDO38_RS26455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26455;old_locus_tag=BVI2075_80055 NZ_CAJZAL010000185.1 Protein Homology CDS 54046 56385 . - 0 ID=cds-WP_034194020.1;Parent=gene-LDO38_RS26455;Dbxref=GenBank:WP_034194020.1;Name=WP_034194020.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885636.1;locus_tag=LDO38_RS26455;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_034194020.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 56606 57487 . - . ID=gene-LDO38_RS26460;Name=LDO38_RS26460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26460;old_locus_tag=BVI2075_80056 NZ_CAJZAL010000185.1 Protein Homology CDS 56606 57487 . - 0 ID=cds-WP_014723426.1;Parent=gene-LDO38_RS26460;Dbxref=GenBank:WP_014723426.1;Name=WP_014723426.1;Ontology_term=GO:0009058,GO:0016853,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isomerase activity|0016853||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212951.1;locus_tag=LDO38_RS26460;product=PhzF family phenazine biosynthesis protein;protein_id=WP_014723426.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 57501 57959 . - . ID=gene-LDO38_RS26465;Name=LDO38_RS26465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26465;old_locus_tag=BVI2075_80057 NZ_CAJZAL010000185.1 Protein Homology CDS 57501 57959 . - 0 ID=cds-WP_011885634.1;Parent=gene-LDO38_RS26465;Dbxref=GenBank:WP_011885634.1;Name=WP_011885634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398680.1;locus_tag=LDO38_RS26465;product=RidA family protein;protein_id=WP_011885634.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 58001 59182 . - . ID=gene-LDO38_RS26470;Name=LDO38_RS26470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26470;old_locus_tag=BVI2075_80058 NZ_CAJZAL010000185.1 Protein Homology CDS 58001 59182 . - 0 ID=cds-WP_011885633.1;Parent=gene-LDO38_RS26470;Dbxref=GenBank:WP_011885633.1;Name=WP_011885633.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522482.1;locus_tag=LDO38_RS26470;product=PLP-dependent aminotransferase family protein;protein_id=WP_011885633.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 59336 60244 . - . ID=gene-LDO38_RS26475;Name=LDO38_RS26475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26475;old_locus_tag=BVI2075_80059 NZ_CAJZAL010000185.1 Protein Homology CDS 59336 60244 . - 0 ID=cds-WP_011885632.1;Parent=gene-LDO38_RS26475;Dbxref=GenBank:WP_011885632.1;Name=WP_011885632.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896405.1;locus_tag=LDO38_RS26475;product=DMT family transporter;protein_id=WP_011885632.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 60321 61016 . - . ID=gene-LDO38_RS26480;Name=LDO38_RS26480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26480;old_locus_tag=BVI2075_80060 NZ_CAJZAL010000185.1 Protein Homology CDS 60321 61016 . - 0 ID=cds-WP_059474966.1;Parent=gene-LDO38_RS26480;Dbxref=GenBank:WP_059474966.1;Name=WP_059474966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494064.1;locus_tag=LDO38_RS26480;product=VOC family protein;protein_id=WP_059474966.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 61210 62670 . + . ID=gene-LDO38_RS26485;Name=LDO38_RS26485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26485;old_locus_tag=BVI2075_80061 NZ_CAJZAL010000185.1 Protein Homology CDS 61210 62670 . + 0 ID=cds-WP_034194022.1;Parent=gene-LDO38_RS26485;Dbxref=GenBank:WP_034194022.1;Name=WP_034194022.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533687.1;locus_tag=LDO38_RS26485;product=PLP-dependent aminotransferase family protein;protein_id=WP_034194022.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 62826 64724 . + . ID=gene-LDO38_RS26490;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=LDO38_RS26490;old_locus_tag=BVI2075_80062 NZ_CAJZAL010000185.1 Protein Homology CDS 62826 64724 . + 0 ID=cds-WP_045578897.1;Parent=gene-LDO38_RS26490;Dbxref=GenBank:WP_045578897.1;Name=WP_045578897.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102343.1;locus_tag=LDO38_RS26490;product=molecular chaperone HtpG;protein_id=WP_045578897.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 64733 65329 . + . ID=gene-LDO38_RS26495;Name=LDO38_RS26495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26495;old_locus_tag=BVI2075_80063 NZ_CAJZAL010000185.1 Protein Homology CDS 64733 65329 . + 0 ID=cds-WP_069246389.1;Parent=gene-LDO38_RS26495;Dbxref=GenBank:WP_069246389.1;Name=WP_069246389.1;Ontology_term=GO:0006744,GO:0008813,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=chorismate lyase activity|0008813||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328957.1;locus_tag=LDO38_RS26495;product=chorismate--pyruvate lyase family protein;protein_id=WP_069246389.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 65329 65805 . + . ID=gene-LDO38_RS26500;Name=LDO38_RS26500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26500;old_locus_tag=BVI2075_80064 NZ_CAJZAL010000185.1 Protein Homology CDS 65329 65805 . + 0 ID=cds-WP_059474967.1;Parent=gene-LDO38_RS26500;Dbxref=GenBank:WP_059474967.1;Name=WP_059474967.1;Ontology_term=GO:0006285,GO:0033958;gbkey=CDS;go_function=DNA-deoxyinosine glycosylase activity|0033958||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723420.1;locus_tag=LDO38_RS26500;product=DNA-deoxyinosine glycosylase;protein_id=WP_059474967.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 65829 66137 . - . ID=gene-LDO38_RS26505;Name=LDO38_RS26505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26505;old_locus_tag=BVI2075_80065 NZ_CAJZAL010000185.1 Protein Homology CDS 65829 66137 . - 0 ID=cds-WP_059474968.1;Parent=gene-LDO38_RS26505;Dbxref=GenBank:WP_059474968.1;Name=WP_059474968.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885626.1;locus_tag=LDO38_RS26505;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_059474968.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 66134 66412 . - . ID=gene-LDO38_RS26510;Name=LDO38_RS26510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26510;old_locus_tag=BVI2075_80066 NZ_CAJZAL010000185.1 Protein Homology CDS 66134 66412 . - 0 ID=cds-WP_059696084.1;Parent=gene-LDO38_RS26510;Dbxref=GenBank:WP_059696084.1;Name=WP_059696084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885625.1;locus_tag=LDO38_RS26510;product=YlcI/YnfO family protein;protein_id=WP_059696084.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 66580 67497 . + . ID=gene-LDO38_RS26515;Name=LDO38_RS26515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26515;old_locus_tag=BVI2075_80067 NZ_CAJZAL010000185.1 Protein Homology CDS 66580 67497 . + 0 ID=cds-WP_014723418.1;Parent=gene-LDO38_RS26515;Dbxref=GenBank:WP_014723418.1;Name=WP_014723418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526403.1;locus_tag=LDO38_RS26515;product=spermidine synthase;protein_id=WP_014723418.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 67696 67938 . + . ID=gene-LDO38_RS26520;Name=LDO38_RS26520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26520;old_locus_tag=BVI2075_80068 NZ_CAJZAL010000185.1 Protein Homology CDS 67696 67938 . + 0 ID=cds-WP_011885623.1;Parent=gene-LDO38_RS26520;Dbxref=GenBank:WP_011885623.1;Name=WP_011885623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490660.1;locus_tag=LDO38_RS26520;product=DUF3311 domain-containing protein;protein_id=WP_011885623.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 67935 69485 . + . ID=gene-LDO38_RS26525;Name=mctP;gbkey=Gene;gene=mctP;gene_biotype=protein_coding;locus_tag=LDO38_RS26525;old_locus_tag=BVI2075_80069 NZ_CAJZAL010000185.1 Protein Homology CDS 67935 69485 . + 0 ID=cds-WP_011885622.1;Parent=gene-LDO38_RS26525;Dbxref=GenBank:WP_011885622.1;Name=WP_011885622.1;Ontology_term=GO:0006848,GO:0015293;gbkey=CDS;gene=mctP;go_function=symporter activity|0015293||IEA;go_process=pyruvate transport|0006848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896416.1;locus_tag=LDO38_RS26525;product=monocarboxylate uptake permease MctP;protein_id=WP_011885622.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 69547 70002 . - . ID=gene-LDO38_RS26530;Name=LDO38_RS26530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26530;old_locus_tag=BVI2075_80070 NZ_CAJZAL010000185.1 Protein Homology CDS 69547 70002 . - 0 ID=cds-WP_011885621.1;Parent=gene-LDO38_RS26530;Dbxref=GenBank:WP_011885621.1;Name=WP_011885621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885621.1;locus_tag=LDO38_RS26530;product=VOC family protein;protein_id=WP_011885621.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 70247 71200 . - . ID=gene-LDO38_RS26535;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=LDO38_RS26535;old_locus_tag=BVI2075_80071 NZ_CAJZAL010000185.1 Protein Homology CDS 70247 71200 . - 0 ID=cds-WP_011885620.1;Parent=gene-LDO38_RS26535;Dbxref=GenBank:WP_011885620.1;Name=WP_011885620.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012432264.1;locus_tag=LDO38_RS26535;product=transaldolase;protein_id=WP_011885620.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 71373 72584 . - . ID=gene-LDO38_RS26540;Name=LDO38_RS26540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26540;old_locus_tag=BVI2075_80072 NZ_CAJZAL010000185.1 Protein Homology CDS 71373 72584 . - 0 ID=cds-WP_014723415.1;Parent=gene-LDO38_RS26540;Dbxref=GenBank:WP_014723415.1;Name=WP_014723415.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186095.1;locus_tag=LDO38_RS26540;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_014723415.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 72641 73816 . - . ID=gene-LDO38_RS26545;Name=LDO38_RS26545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26545;old_locus_tag=BVI2075_80073 NZ_CAJZAL010000185.1 Protein Homology CDS 72641 73816 . - 0 ID=cds-WP_011885618.1;Parent=gene-LDO38_RS26545;Dbxref=GenBank:WP_011885618.1;Name=WP_011885618.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186167.1;locus_tag=LDO38_RS26545;product=vWA domain-containing protein;protein_id=WP_011885618.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 73838 74680 . - . ID=gene-LDO38_RS26550;Name=LDO38_RS26550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26550;old_locus_tag=BVI2075_80074 NZ_CAJZAL010000185.1 Protein Homology CDS 73838 74680 . - 0 ID=cds-WP_059568441.1;Parent=gene-LDO38_RS26550;Dbxref=GenBank:WP_059568441.1;Name=WP_059568441.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186676.1;locus_tag=LDO38_RS26550;product=AAA family ATPase;protein_id=WP_059568441.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 74926 75285 . + . ID=gene-LDO38_RS26555;Name=LDO38_RS26555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26555;old_locus_tag=BVI2075_80075 NZ_CAJZAL010000185.1 Protein Homology CDS 74926 75285 . + 0 ID=cds-WP_011885616.1;Parent=gene-LDO38_RS26555;Dbxref=GenBank:WP_011885616.1;Name=WP_011885616.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601686.1;locus_tag=LDO38_RS26555;product=c-type cytochrome;protein_id=WP_011885616.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 75326 75685 . + . ID=gene-LDO38_RS26560;Name=LDO38_RS26560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26560;old_locus_tag=BVI2075_80076 NZ_CAJZAL010000185.1 Protein Homology CDS 75326 75685 . + 0 ID=cds-WP_011885615.1;Parent=gene-LDO38_RS26560;Dbxref=GenBank:WP_011885615.1;Name=WP_011885615.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761210.1;locus_tag=LDO38_RS26560;product=c-type cytochrome;protein_id=WP_011885615.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 75786 76268 . - . ID=gene-LDO38_RS26565;Name=LDO38_RS26565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26565;old_locus_tag=BVI2075_80077 NZ_CAJZAL010000185.1 Protein Homology CDS 75786 76268 . - 0 ID=cds-WP_011885614.1;Parent=gene-LDO38_RS26565;Dbxref=GenBank:WP_011885614.1;Name=WP_011885614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885614.1;locus_tag=LDO38_RS26565;product=DUF1841 family protein;protein_id=WP_011885614.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 76484 77413 . + . ID=gene-LDO38_RS26570;Name=LDO38_RS26570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26570;old_locus_tag=BVI2075_80079 NZ_CAJZAL010000185.1 Protein Homology CDS 76484 77413 . + 0 ID=cds-WP_045578902.1;Parent=gene-LDO38_RS26570;Dbxref=GenBank:WP_045578902.1;Name=WP_045578902.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545870.1;locus_tag=LDO38_RS26570;product=DMT family transporter;protein_id=WP_045578902.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 77705 78349 . - . ID=gene-LDO38_RS26575;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=LDO38_RS26575;old_locus_tag=BVI2075_80080 NZ_CAJZAL010000185.1 Protein Homology CDS 77705 78349 . - 0 ID=cds-WP_014723413.1;Parent=gene-LDO38_RS26575;Dbxref=GenBank:WP_014723413.1;Name=WP_014723413.1;Ontology_term=GO:0006281,GO:0140078;gbkey=CDS;gene=nth;go_function=class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892349.1;locus_tag=LDO38_RS26575;product=endonuclease III;protein_id=WP_014723413.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 78346 79314 . - . ID=gene-LDO38_RS26580;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=LDO38_RS26580;old_locus_tag=BVI2075_80081 NZ_CAJZAL010000185.1 Protein Homology CDS 78346 79314 . - 0 ID=cds-WP_059461268.1;Parent=gene-LDO38_RS26580;Dbxref=GenBank:WP_059461268.1;Name=WP_059461268.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478197.1;locus_tag=LDO38_RS26580;product=electron transport complex subunit RsxB;protein_id=WP_059461268.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 79472 80104 . + . ID=gene-LDO38_RS26585;Name=LDO38_RS26585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26585;old_locus_tag=BVI2075_80082 NZ_CAJZAL010000185.1 Protein Homology CDS 79472 80104 . + 0 ID=cds-WP_011885610.1;Parent=gene-LDO38_RS26585;Dbxref=GenBank:WP_011885610.1;Name=WP_011885610.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185974.1;locus_tag=LDO38_RS26585;product=TetR family transcriptional regulator;protein_id=WP_011885610.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 80207 81727 . - . ID=gene-LDO38_RS26590;Name=LDO38_RS26590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26590;old_locus_tag=BVI2075_80084 NZ_CAJZAL010000185.1 Protein Homology CDS 80207 81727 . - 0 ID=cds-WP_011885609.1;Parent=gene-LDO38_RS26590;Dbxref=GenBank:WP_011885609.1;Name=WP_011885609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545868.1;locus_tag=LDO38_RS26590;product=polyhydroxyalkanoate depolymerase;protein_id=WP_011885609.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 81960 83789 . - . ID=gene-LDO38_RS26595;Name=LDO38_RS26595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26595;old_locus_tag=BVI2075_80085 NZ_CAJZAL010000185.1 Protein Homology CDS 81960 83789 . - 0 ID=cds-WP_059461269.1;Parent=gene-LDO38_RS26595;Dbxref=GenBank:WP_059461269.1;Name=WP_059461269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331492.1;locus_tag=LDO38_RS26595;product=glycoside hydrolase family 15 protein;protein_id=WP_059461269.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 83955 85202 . + . ID=gene-LDO38_RS26600;Name=LDO38_RS26600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26600;old_locus_tag=BVI2075_80086 NZ_CAJZAL010000185.1 Protein Homology CDS 83955 85202 . + 0 ID=cds-WP_155626100.1;Parent=gene-LDO38_RS26600;Dbxref=GenBank:WP_155626100.1;Name=WP_155626100.1;Ontology_term=GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896430.1;locus_tag=LDO38_RS26600;product=lactonase family protein;protein_id=WP_155626100.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 85335 89182 . - . ID=gene-LDO38_RS26605;Name=LDO38_RS26605;end_range=89182,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26605;partial=true NZ_CAJZAL010000185.1 Protein Homology CDS 85335 89182 . - 2 ID=cds-WP_435520990.1;Parent=gene-LDO38_RS26605;Dbxref=GenBank:WP_435520990.1;Name=WP_435520990.1;end_range=89182,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885606.1;locus_tag=LDO38_RS26605;partial=true;product=DNA translocase FtsK;protein_id=WP_435520990.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 89193 89453 . - . ID=gene-LDO38_RS30680;Name=LDO38_RS30680;end_range=89453,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30680;old_locus_tag=BVI2075_80088;partial=true;start_range=.,89193 NZ_CAJZAL010000185.1 Protein Homology CDS 89193 89453 . - 1 ID=cds-WP_435520992.1;Parent=gene-LDO38_RS30680;Dbxref=GenBank:WP_435520992.1;Name=WP_435520992.1;end_range=89453,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553864.1;locus_tag=LDO38_RS30680;partial=true;product=hypothetical protein;protein_id=WP_435520992.1;start_range=.,89193;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 89464 89727 . - . ID=gene-LDO38_RS30685;Name=LDO38_RS30685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30685;old_locus_tag=BVI2075_80090;partial=true;start_range=.,89464 NZ_CAJZAL010000185.1 Protein Homology CDS 89464 89727 . - 0 ID=cds-WP_435520991.1;Parent=gene-LDO38_RS30685;Dbxref=GenBank:WP_435520991.1;Name=WP_435520991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694342.1;locus_tag=LDO38_RS30685;partial=true;product=hypothetical protein;protein_id=WP_435520991.1;start_range=.,89464;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 89924 90466 . - . ID=gene-LDO38_RS26610;Name=LDO38_RS26610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26610;old_locus_tag=BVI2075_80092 NZ_CAJZAL010000185.1 Protein Homology CDS 89924 90466 . - 0 ID=cds-WP_060081949.1;Parent=gene-LDO38_RS26610;Dbxref=GenBank:WP_060081949.1;Name=WP_060081949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885605.1;locus_tag=LDO38_RS26610;product=META domain-containing protein;protein_id=WP_060081949.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 90668 91882 . + . ID=gene-LDO38_RS26615;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=LDO38_RS26615;old_locus_tag=BVI2075_80091 NZ_CAJZAL010000185.1 Protein Homology CDS 90668 91882 . + 0 ID=cds-WP_011885604.1;Parent=gene-LDO38_RS26615;Dbxref=GenBank:WP_011885604.1;Name=WP_011885604.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698942.1;locus_tag=LDO38_RS26615;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_011885604.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 91900 92094 . + . ID=gene-LDO38_RS26620;Name=LDO38_RS26620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26620;old_locus_tag=BVI2075_80093 NZ_CAJZAL010000185.1 Protein Homology CDS 91900 92094 . + 0 ID=cds-WP_011885603.1;Parent=gene-LDO38_RS26620;Dbxref=GenBank:WP_011885603.1;Name=WP_011885603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545862.1;locus_tag=LDO38_RS26620;product=DUF6726 family protein;protein_id=WP_011885603.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 92181 92573 . + . ID=gene-LDO38_RS26625;Name=LDO38_RS26625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26625;old_locus_tag=BVI2075_80094 NZ_CAJZAL010000185.1 Protein Homology CDS 92181 92573 . + 0 ID=cds-WP_014723404.1;Parent=gene-LDO38_RS26625;Dbxref=GenBank:WP_014723404.1;Name=WP_014723404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415292.1;locus_tag=LDO38_RS26625;product=MliC family protein;protein_id=WP_014723404.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 93110 94648 . + . ID=gene-LDO38_RS26630;Name=LDO38_RS26630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26630;old_locus_tag=BVI2075_80095 NZ_CAJZAL010000185.1 Protein Homology CDS 93110 94648 . + 0 ID=cds-WP_011885601.1;Parent=gene-LDO38_RS26630;Dbxref=GenBank:WP_011885601.1;Name=WP_011885601.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545860.1;locus_tag=LDO38_RS26630;product=DEAD/DEAH box helicase;protein_id=WP_011885601.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 94965 95858 . - . ID=gene-LDO38_RS26635;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=LDO38_RS26635;old_locus_tag=BVI2075_80096 NZ_CAJZAL010000185.1 Protein Homology CDS 94965 95858 . - 0 ID=cds-WP_059454394.1;Parent=gene-LDO38_RS26635;Dbxref=GenBank:WP_059454394.1;Name=WP_059454394.1;Ontology_term=GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723401.1;locus_tag=LDO38_RS26635;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_059454394.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 95881 96735 . - . ID=gene-LDO38_RS26640;Name=LDO38_RS26640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26640;old_locus_tag=BVI2075_80097 NZ_CAJZAL010000185.1 Protein Homology CDS 95881 96735 . - 0 ID=cds-WP_014723400.1;Parent=gene-LDO38_RS26640;Dbxref=GenBank:WP_014723400.1;Name=WP_014723400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758622.1;locus_tag=LDO38_RS26640;product=sulfurtransferase;protein_id=WP_014723400.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 96960 100493 . + . ID=gene-LDO38_RS26645;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=LDO38_RS26645;old_locus_tag=BVI2075_80098 NZ_CAJZAL010000185.1 Protein Homology CDS 96960 100493 . + 0 ID=cds-WP_046424406.1;Parent=gene-LDO38_RS26645;Dbxref=GenBank:WP_046424406.1;Name=WP_046424406.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892329.1;locus_tag=LDO38_RS26645;product=DNA polymerase III subunit alpha;protein_id=WP_046424406.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 100722 101810 . + . ID=gene-LDO38_RS26650;Name=LDO38_RS26650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26650;old_locus_tag=BVI2075_80099 NZ_CAJZAL010000185.1 Protein Homology CDS 100722 101810 . + 0 ID=cds-WP_059461273.1;Parent=gene-LDO38_RS26650;Dbxref=GenBank:WP_059461273.1;Name=WP_059461273.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478209.1;locus_tag=LDO38_RS26650;product=glycosyltransferase family 9 protein;protein_id=WP_059461273.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 102101 103279 . + . ID=gene-LDO38_RS26655;Name=LDO38_RS26655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26655;old_locus_tag=BVI2075_80100 NZ_CAJZAL010000185.1 Protein Homology CDS 102101 103279 . + 0 ID=cds-WP_059461274.1;Parent=gene-LDO38_RS26655;Dbxref=GenBank:WP_059461274.1;Name=WP_059461274.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328936.1;locus_tag=LDO38_RS26655;product=glycosyltransferase family 9 protein;protein_id=WP_059461274.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 103466 104749 . - . ID=gene-LDO38_RS26660;Name=LDO38_RS26660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26660;old_locus_tag=BVI2075_80102 NZ_CAJZAL010000185.1 Protein Homology CDS 103466 104749 . - 0 ID=cds-WP_059696046.1;Parent=gene-LDO38_RS26660;Dbxref=GenBank:WP_059696046.1;Name=WP_059696046.1;Ontology_term=GO:0009103,GO:0008754,GO:0008755,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=O-antigen ligase activity|0008754||IEA,O antigen polymerase activity|0008755||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657533.1;locus_tag=LDO38_RS26660;product=O-antigen ligase family protein;protein_id=WP_059696046.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 104881 105723 . - . ID=gene-LDO38_RS26665;Name=LDO38_RS26665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26665;old_locus_tag=BVI2075_80103 NZ_CAJZAL010000185.1 Protein Homology CDS 104881 105723 . - 0 ID=cds-WP_011885594.1;Parent=gene-LDO38_RS26665;Dbxref=GenBank:WP_011885594.1;Name=WP_011885594.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409051.1;locus_tag=LDO38_RS26665;product=glycosyltransferase family 2 protein;protein_id=WP_011885594.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 105860 106612 . - . ID=gene-LDO38_RS26670;Name=LDO38_RS26670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26670;old_locus_tag=BVI2075_80105 NZ_CAJZAL010000185.1 Protein Homology CDS 105860 106612 . - 0 ID=cds-WP_034194044.1;Parent=gene-LDO38_RS26670;Dbxref=GenBank:WP_034194044.1;Name=WP_034194044.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364356.1;locus_tag=LDO38_RS26670;product=glycosyltransferase family 2 protein;protein_id=WP_034194044.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 106820 108571 . + . ID=gene-LDO38_RS26675;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=LDO38_RS26675;old_locus_tag=BVI2075_80104 NZ_CAJZAL010000185.1 Protein Homology CDS 106820 108571 . + 0 ID=cds-WP_041493869.1;Parent=gene-LDO38_RS26675;Dbxref=GenBank:WP_041493869.1;Name=WP_041493869.1;Ontology_term=GO:0006869,GO:0005319,GO:0005524,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=lipid transporter activity|0005319||IEA,ATP binding|0005524||IEA;go_process=lipid transport|0006869||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896445.1;locus_tag=LDO38_RS26675;product=lipid A export permease/ATP-binding protein MsbA;protein_id=WP_041493869.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 108673 109065 . + . ID=gene-LDO38_RS26680;Name=LDO38_RS26680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26680;old_locus_tag=BVI2075_80107 NZ_CAJZAL010000185.1 Protein Homology CDS 108673 109065 . + 0 ID=cds-WP_011885591.1;Parent=gene-LDO38_RS26680;Dbxref=GenBank:WP_011885591.1;Name=WP_011885591.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405607.1;locus_tag=LDO38_RS26680;product=RcnB family protein;protein_id=WP_011885591.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 109140 109703 . - . ID=gene-LDO38_RS26685;Name=LDO38_RS26685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26685;old_locus_tag=BVI2075_80108 NZ_CAJZAL010000185.1 Protein Homology CDS 109140 109703 . - 0 ID=cds-WP_014723395.1;Parent=gene-LDO38_RS26685;Dbxref=GenBank:WP_014723395.1;Name=WP_014723395.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723395.1;locus_tag=LDO38_RS26685;product=FUSC family protein;protein_id=WP_014723395.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 109741 111009 . - . ID=gene-LDO38_RS26690;Name=LDO38_RS26690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26690;old_locus_tag=BVI2075_80109 NZ_CAJZAL010000185.1 Protein Homology CDS 109741 111009 . - 0 ID=cds-WP_224056710.1;Parent=gene-LDO38_RS26690;Dbxref=GenBank:WP_224056710.1;Name=WP_224056710.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761058.1;locus_tag=LDO38_RS26690;product=MFS transporter;protein_id=WP_224056710.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 111006 111968 . - . ID=gene-LDO38_RS26695;Name=LDO38_RS26695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26695;old_locus_tag=BVI2075_80110 NZ_CAJZAL010000185.1 Protein Homology CDS 111006 111968 . - 0 ID=cds-WP_045578912.1;Parent=gene-LDO38_RS26695;Dbxref=GenBank:WP_045578912.1;Name=WP_045578912.1;Ontology_term=GO:0019684,GO:0009055;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;go_process=photosynthesis%2C light reaction|0019684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415303.1;locus_tag=LDO38_RS26695;product=PRC-barrel domain-containing protein;protein_id=WP_045578912.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 112236 112571 . - . ID=gene-LDO38_RS26700;Name=LDO38_RS26700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26700;old_locus_tag=BVI2075_80112 NZ_CAJZAL010000185.1 Protein Homology CDS 112236 112571 . - 0 ID=cds-WP_011885587.1;Parent=gene-LDO38_RS26700;Dbxref=GenBank:WP_011885587.1;Name=WP_011885587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478219.1;locus_tag=LDO38_RS26700;product=YggL family protein;protein_id=WP_011885587.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 112838 113248 . - . ID=gene-LDO38_RS26705;Name=LDO38_RS26705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26705 NZ_CAJZAL010000185.1 Protein Homology CDS 112838 113248 . - 0 ID=cds-WP_011885586.1;Parent=gene-LDO38_RS26705;Dbxref=GenBank:WP_011885586.1;Name=WP_011885586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885586.1;locus_tag=LDO38_RS26705;product=hypothetical protein;protein_id=WP_011885586.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 113241 113912 . - . ID=gene-LDO38_RS26710;Name=LDO38_RS26710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26710;old_locus_tag=BVI2075_80114 NZ_CAJZAL010000185.1 Protein Homology CDS 113241 113912 . - 0 ID=cds-WP_059463506.1;Parent=gene-LDO38_RS26710;Dbxref=GenBank:WP_059463506.1;Name=WP_059463506.1;Ontology_term=GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885585.1;locus_tag=LDO38_RS26710;product=M35 family metallo-endopeptidase;protein_id=WP_059463506.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 113914 114438 . - . ID=gene-LDO38_RS26715;Name=LDO38_RS26715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26715;old_locus_tag=BVI2075_80115 NZ_CAJZAL010000185.1 Protein Homology CDS 113914 114438 . - 0 ID=cds-WP_051974443.1;Parent=gene-LDO38_RS26715;Dbxref=GenBank:WP_051974443.1;Name=WP_051974443.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017315.6;locus_tag=LDO38_RS26715;product=PAAR domain-containing protein;protein_id=WP_051974443.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 114641 115255 . + . ID=gene-LDO38_RS26720;Name=LDO38_RS26720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26720;old_locus_tag=BVI2075_80116 NZ_CAJZAL010000185.1 Protein Homology CDS 114641 115255 . + 0 ID=cds-WP_034194050.1;Parent=gene-LDO38_RS26720;Dbxref=GenBank:WP_034194050.1;Name=WP_034194050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885583.1;locus_tag=LDO38_RS26720;product=pentapeptide repeat-containing protein;protein_id=WP_034194050.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 115301 116770 . - . ID=gene-LDO38_RS26725;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=LDO38_RS26725;old_locus_tag=BVI2075_80117 NZ_CAJZAL010000185.1 Protein Homology CDS 115301 116770 . - 0 ID=cds-WP_011885582.1;Parent=gene-LDO38_RS26725;Dbxref=GenBank:WP_011885582.1;Name=WP_011885582.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545847.1;locus_tag=LDO38_RS26725;product=ribonuclease G;protein_id=WP_011885582.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 116779 117411 . - . ID=gene-LDO38_RS26730;Name=LDO38_RS26730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26730;old_locus_tag=BVI2075_80118 NZ_CAJZAL010000185.1 Protein Homology CDS 116779 117411 . - 0 ID=cds-WP_045578914.1;Parent=gene-LDO38_RS26730;Dbxref=GenBank:WP_045578914.1;Name=WP_045578914.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352747.1;locus_tag=LDO38_RS26730;product=Maf family protein;protein_id=WP_045578914.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 117463 117933 . - . ID=gene-LDO38_RS26735;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=LDO38_RS26735;old_locus_tag=BVI2075_80119 NZ_CAJZAL010000185.1 Protein Homology CDS 117463 117933 . - 0 ID=cds-WP_011885580.1;Parent=gene-LDO38_RS26735;Dbxref=GenBank:WP_011885580.1;Name=WP_011885580.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352746.1;locus_tag=LDO38_RS26735;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_011885580.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 117953 118399 . - . ID=gene-LDO38_RS26740;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=LDO38_RS26740;old_locus_tag=BVI2075_80120 NZ_CAJZAL010000185.1 Protein Homology CDS 117953 118399 . - 0 ID=cds-WP_011885579.1;Parent=gene-LDO38_RS26740;Dbxref=GenBank:WP_011885579.1;Name=WP_011885579.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398740.1;locus_tag=LDO38_RS26740;product=ribosome silencing factor;protein_id=WP_011885579.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 118404 119123 . - . ID=gene-LDO38_RS26745;Name=LDO38_RS26745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26745;old_locus_tag=BVI2075_80121 NZ_CAJZAL010000185.1 Protein Homology CDS 118404 119123 . - 0 ID=cds-WP_072465508.1;Parent=gene-LDO38_RS26745;Dbxref=GenBank:WP_072465508.1;Name=WP_072465508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364347.1;locus_tag=LDO38_RS26745;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_072465508.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 119154 120074 . - . ID=gene-LDO38_RS26750;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=LDO38_RS26750;old_locus_tag=BVI2075_80122 NZ_CAJZAL010000185.1 Protein Homology CDS 119154 120074 . - 0 ID=cds-WP_014723389.1;Parent=gene-LDO38_RS26750;Dbxref=GenBank:WP_014723389.1;Name=WP_014723389.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405601.1;locus_tag=LDO38_RS26750;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_014723389.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 120193 121470 . - . ID=gene-LDO38_RS26755;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=LDO38_RS26755;old_locus_tag=BVI2075_80123 NZ_CAJZAL010000185.1 Protein Homology CDS 120193 121470 . - 0 ID=cds-WP_011885576.1;Parent=gene-LDO38_RS26755;Dbxref=GenBank:WP_011885576.1;Name=WP_011885576.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657519.1;locus_tag=LDO38_RS26755;product=phosphoribosylamine--glycine ligase;protein_id=WP_011885576.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 121576 122304 . - . ID=gene-LDO38_RS26760;Name=LDO38_RS26760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26760;old_locus_tag=BVI2075_80124 NZ_CAJZAL010000185.1 Protein Homology CDS 121576 122304 . - 0 ID=cds-WP_011885575.1;Parent=gene-LDO38_RS26760;Dbxref=GenBank:WP_011885575.1;Name=WP_011885575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091139.1;locus_tag=LDO38_RS26760;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_011885575.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 122509 123159 . - . ID=gene-LDO38_RS26765;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=LDO38_RS26765;old_locus_tag=BVI2075_80125 NZ_CAJZAL010000185.1 Protein Homology CDS 122509 123159 . - 0 ID=cds-WP_011885574.1;Parent=gene-LDO38_RS26765;Dbxref=GenBank:WP_011885574.1;Name=WP_011885574.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091140.1;locus_tag=LDO38_RS26765;product=uracil phosphoribosyltransferase;protein_id=WP_011885574.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 123388 124167 . + . ID=gene-LDO38_RS26770;Name=LDO38_RS26770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26770;old_locus_tag=BVI2075_80127 NZ_CAJZAL010000185.1 Protein Homology CDS 123388 124167 . + 0 ID=cds-WP_034194082.1;Parent=gene-LDO38_RS26770;Dbxref=GenBank:WP_034194082.1;Name=WP_034194082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892270.1;locus_tag=LDO38_RS26770;product=SDR family oxidoreductase;protein_id=WP_034194082.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 124221 124613 . + . ID=gene-LDO38_RS26775;Name=LDO38_RS26775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26775;old_locus_tag=BVI2075_80126 NZ_CAJZAL010000185.1 Protein Homology CDS 124221 124613 . + 0 ID=cds-WP_014723386.1;Parent=gene-LDO38_RS26775;Dbxref=GenBank:WP_014723386.1;Name=WP_014723386.1;Ontology_term=GO:0019242,GO:0008929;gbkey=CDS;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752212.1;locus_tag=LDO38_RS26775;product=methylglyoxal synthase;protein_id=WP_014723386.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 124829 125803 . + . ID=gene-LDO38_RS26780;Name=LDO38_RS26780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26780;old_locus_tag=BVI2075_80128 NZ_CAJZAL010000185.1 Protein Homology CDS 124829 125803 . + 0 ID=cds-WP_059579176.1;Parent=gene-LDO38_RS26780;Dbxref=GenBank:WP_059579176.1;Name=WP_059579176.1;Ontology_term=GO:0003960,GO:0070402;gbkey=CDS;go_function=NADPH:quinone reductase activity|0003960||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405597.1;locus_tag=LDO38_RS26780;product=quinone oxidoreductase family protein;protein_id=WP_059579176.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 126160 126252 . + . ID=gene-LDO38_RS26785;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=LDO38_RS26785 NZ_CAJZAL010000185.1 Protein Homology CDS 126160 126252 . + 0 ID=cds-WP_006752209.1;Parent=gene-LDO38_RS26785;Dbxref=GenBank:WP_006752209.1;Name=WP_006752209.1;Ontology_term=GO:0006813,GO:0043462,GO:0031004;gbkey=CDS;gene=kdpF;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_process=potassium ion transport|0006813||IEA,regulation of ATP-dependent activity|0043462||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331558.1;locus_tag=LDO38_RS26785;product=K(+)-transporting ATPase subunit F;protein_id=WP_006752209.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 126249 128054 . + . ID=gene-LDO38_RS26790;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=LDO38_RS26790;old_locus_tag=BVI2075_80130 NZ_CAJZAL010000185.1 Protein Homology CDS 126249 128054 . + 0 ID=cds-WP_034194054.1;Parent=gene-LDO38_RS26790;Dbxref=GenBank:WP_034194054.1;Name=WP_034194054.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352736.1;locus_tag=LDO38_RS26790;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_034194054.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 128107 130191 . + . ID=gene-LDO38_RS26795;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=LDO38_RS26795;old_locus_tag=BVI2075_80131 NZ_CAJZAL010000185.1 Protein Homology CDS 128107 130191 . + 0 ID=cds-WP_059461280.1;Parent=gene-LDO38_RS26795;Dbxref=GenBank:WP_059461280.1;Name=WP_059461280.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352735.1;locus_tag=LDO38_RS26795;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_059461280.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 130217 130798 . + . ID=gene-LDO38_RS26800;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=LDO38_RS26800;old_locus_tag=BVI2075_80132 NZ_CAJZAL010000185.1 Protein Homology CDS 130217 130798 . + 0 ID=cds-WP_014723380.1;Parent=gene-LDO38_RS26800;Dbxref=GenBank:WP_014723380.1;Name=WP_014723380.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102455.1;locus_tag=LDO38_RS26800;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_014723380.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq pseudogene 131022 133979 . + . ID=gene-LDO38_RS26805;Name=LDO38_RS26805;end_range=133979,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS26805;old_locus_tag=BVI2075_80133;partial=true;pseudo=true NZ_CAJZAL010000185.1 Protein Homology CDS 131022 133979 . + 0 ID=cds-LDO38_RS26805;Parent=gene-LDO38_RS26805;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=133979,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025067.1;locus_tag=LDO38_RS26805;partial=true;product=DUF4118 domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 134026 134724 . + . ID=gene-LDO38_RS26810;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=LDO38_RS26810;old_locus_tag=BVI2075_80134 NZ_CAJZAL010000185.1 Protein Homology CDS 134026 134724 . + 0 ID=cds-WP_011885566.1;Parent=gene-LDO38_RS26810;Dbxref=GenBank:WP_011885566.1;Name=WP_011885566.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752204.1;locus_tag=LDO38_RS26810;product=two-component system response regulator KdpE;protein_id=WP_011885566.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 134824 135102 . + . ID=gene-LDO38_RS26815;Name=LDO38_RS26815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26815;old_locus_tag=BVI2075_80135 NZ_CAJZAL010000185.1 Protein Homology CDS 134824 135102 . + 0 ID=cds-WP_045579438.1;Parent=gene-LDO38_RS26815;Dbxref=GenBank:WP_045579438.1;Name=WP_045579438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483516.1;locus_tag=LDO38_RS26815;product=putative hemolysin;protein_id=WP_045579438.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 135301 135621 . + . ID=gene-LDO38_RS26820;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=LDO38_RS26820;old_locus_tag=BVI2075_80136 NZ_CAJZAL010000185.1 Protein Homology CDS 135301 135621 . + 0 ID=cds-WP_011885564.1;Parent=gene-LDO38_RS26820;Dbxref=GenBank:WP_011885564.1;Name=WP_011885564.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896472.1;locus_tag=LDO38_RS26820;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_011885564.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 135847 136464 . + . ID=gene-LDO38_RS26825;Name=LDO38_RS26825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26825;old_locus_tag=BVI2075_80138 NZ_CAJZAL010000185.1 Protein Homology CDS 135847 136464 . + 0 ID=cds-WP_011885563.1;Parent=gene-LDO38_RS26825;Dbxref=GenBank:WP_011885563.1;Name=WP_011885563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009980272.1;locus_tag=LDO38_RS26825;product=DUF4126 domain-containing protein;protein_id=WP_011885563.1;transl_table=11 NZ_CAJZAL010000185.1 RefSeq gene 136572 137677 . + . ID=gene-LDO38_RS26830;Name=LDO38_RS26830;end_range=137677,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26830;partial=true NZ_CAJZAL010000185.1 Protein Homology CDS 136572 137677 . + 0 ID=cds-WP_435520993.1;Parent=gene-LDO38_RS26830;Dbxref=GenBank:WP_435520993.1;Name=WP_435520993.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;end_range=137677,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754236.1;locus_tag=LDO38_RS26830;partial=true;product=ABC transporter permease;protein_id=WP_435520993.1;transl_table=11 ##sequence-region NZ_CAJZAL010000186.1 1 30029 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000186.1 RefSeq region 1 30029 . + . ID=NZ_CAJZAL010000186.1:1..30029;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_80 NZ_CAJZAL010000186.1 RefSeq pseudogene 1 184 . + . ID=gene-LDO38_RS26835;Name=LDO38_RS26835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS26835;old_locus_tag=BVI2075_800001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000186.1 Protein Homology CDS 1 184 . + 1 ID=cds-LDO38_RS26835;Parent=gene-LDO38_RS26835;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006499070.1;locus_tag=LDO38_RS26835;partial=true;product=VanZ family protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 395 712 . + . ID=gene-LDO38_RS26840;Name=LDO38_RS26840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26840;old_locus_tag=BVI2075_800002 NZ_CAJZAL010000186.1 Protein Homology CDS 395 712 . + 0 ID=cds-WP_011886145.1;Parent=gene-LDO38_RS26840;Dbxref=GenBank:WP_011886145.1;Name=WP_011886145.1;Ontology_term=GO:0009055,GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090546.1;locus_tag=LDO38_RS26840;product=(2Fe-2S) ferredoxin domain-containing protein;protein_id=WP_011886145.1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 726 1370 . + . ID=gene-LDO38_RS26845;Name=LDO38_RS26845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26845;old_locus_tag=BVI2075_800003 NZ_CAJZAL010000186.1 Protein Homology CDS 726 1370 . + 0 ID=cds-WP_059568255.1;Parent=gene-LDO38_RS26845;Dbxref=GenBank:WP_059568255.1;Name=WP_059568255.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908400.1;locus_tag=LDO38_RS26845;product=alpha/beta hydrolase;protein_id=WP_059568255.1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 2111 3424 . + . ID=gene-LDO38_RS26850;Name=LDO38_RS26850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26850;old_locus_tag=BVI2075_800004 NZ_CAJZAL010000186.1 Protein Homology CDS 2111 3424 . + 0 ID=cds-WP_011886143.1;Parent=gene-LDO38_RS26850;Dbxref=GenBank:WP_011886143.1;Name=WP_011886143.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534083.1;locus_tag=LDO38_RS26850;product=D-alanyl-D-alanine carboxypeptidase family protein;protein_id=WP_011886143.1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 3473 4399 . + . ID=gene-LDO38_RS26855;Name=LDO38_RS26855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26855;old_locus_tag=BVI2075_800005 NZ_CAJZAL010000186.1 Protein Homology CDS 3473 4399 . + 0 ID=cds-WP_045578747.1;Parent=gene-LDO38_RS26855;Dbxref=GenBank:WP_045578747.1;Name=WP_045578747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886142.1;locus_tag=LDO38_RS26855;product=D-amino acid aminotransferase;protein_id=WP_045578747.1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 4399 4707 . + . ID=gene-LDO38_RS26860;Name=LDO38_RS26860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26860;old_locus_tag=BVI2075_800006 NZ_CAJZAL010000186.1 Protein Homology CDS 4399 4707 . + 0 ID=cds-WP_011886141.1;Parent=gene-LDO38_RS26860;Dbxref=GenBank:WP_011886141.1;Name=WP_011886141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601869.1;locus_tag=LDO38_RS26860;product=HP0495 family protein;protein_id=WP_011886141.1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 4739 5710 . - . ID=gene-LDO38_RS26865;Name=LDO38_RS26865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26865;old_locus_tag=BVI2075_800007 NZ_CAJZAL010000186.1 Protein Homology CDS 4739 5710 . - 0 ID=cds-WP_011886140.1;Parent=gene-LDO38_RS26865;Dbxref=GenBank:WP_011886140.1;Name=WP_011886140.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886140.1;locus_tag=LDO38_RS26865;product=transcriptional regulator GcvA;protein_id=WP_011886140.1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 5813 6139 . + . ID=gene-LDO38_RS26870;Name=LDO38_RS26870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26870;old_locus_tag=BVI2075_800009 NZ_CAJZAL010000186.1 Protein Homology CDS 5813 6139 . + 0 ID=cds-WP_011886139.1;Parent=gene-LDO38_RS26870;Dbxref=GenBank:WP_011886139.1;Name=WP_011886139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546304.1;locus_tag=LDO38_RS26870;product=DUF2917 domain-containing protein;protein_id=WP_011886139.1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 6223 6978 . + . ID=gene-LDO38_RS26875;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=LDO38_RS26875;old_locus_tag=BVI2075_800008 NZ_CAJZAL010000186.1 Protein Homology CDS 6223 6978 . + 0 ID=cds-WP_011886138.1;Parent=gene-LDO38_RS26875;Dbxref=GenBank:WP_011886138.1;Name=WP_011886138.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364793.1;locus_tag=LDO38_RS26875;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_011886138.1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 6971 7963 . + . ID=gene-LDO38_RS26880;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=LDO38_RS26880;old_locus_tag=BVI2075_800010 NZ_CAJZAL010000186.1 Protein Homology CDS 6971 7963 . + 0 ID=cds-WP_011886137.1;Parent=gene-LDO38_RS26880;Dbxref=GenBank:WP_011886137.1;Name=WP_011886137.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601526.1;locus_tag=LDO38_RS26880;product=lipoyl synthase;protein_id=WP_011886137.1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 8247 9263 . + . ID=gene-LDO38_RS26885;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=LDO38_RS26885;old_locus_tag=BVI2075_800011 NZ_CAJZAL010000186.1 Protein Homology CDS 8247 9263 . + 0 ID=cds-WP_069246339.1;Parent=gene-LDO38_RS26885;Dbxref=GenBank:WP_069246339.1;Name=WP_069246339.1;Ontology_term=GO:0015734,GO:0015411,GO:0030977,GO:0042597,GO:0055052;gbkey=CDS;gene=tauA;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA,taurine binding|0030977||IEA;go_process=taurine transmembrane transport|0015734||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763294.1;locus_tag=LDO38_RS26885;product=taurine ABC transporter substrate-binding protein;protein_id=WP_069246339.1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 9303 10100 . + . ID=gene-LDO38_RS26890;Name=LDO38_RS26890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26890;old_locus_tag=BVI2075_800012 NZ_CAJZAL010000186.1 Protein Homology CDS 9303 10100 . + 0 ID=cds-WP_034192533.1;Parent=gene-LDO38_RS26890;Dbxref=GenBank:WP_034192533.1;Name=WP_034192533.1;Ontology_term=GO:0015734,GO:0005524,GO:0015411,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type taurine transporter transporter activity|0015411||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=taurine transmembrane transport|0015734||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412682.1;locus_tag=LDO38_RS26890;product=taurine ABC transporter ATP-binding protein;protein_id=WP_034192533.1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 10100 11062 . + . ID=gene-LDO38_RS26895;Name=LDO38_RS26895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26895;old_locus_tag=BVI2075_800013 NZ_CAJZAL010000186.1 Protein Homology CDS 10100 11062 . + 0 ID=cds-WP_069246338.1;Parent=gene-LDO38_RS26895;Dbxref=GenBank:WP_069246338.1;Name=WP_069246338.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895924.1;locus_tag=LDO38_RS26895;product=ABC transporter permease subunit;protein_id=WP_069246338.1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 11159 11887 . + . ID=gene-LDO38_RS26900;Name=LDO38_RS26900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26900;old_locus_tag=BVI2075_800014 NZ_CAJZAL010000186.1 Protein Homology CDS 11159 11887 . + 0 ID=cds-WP_224056715.1;Parent=gene-LDO38_RS26900;Dbxref=GenBank:WP_224056715.1;Name=WP_224056715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886133.1;locus_tag=LDO38_RS26900;product=UPF0149 family protein;protein_id=WP_224056715.1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 11948 13840 . - . ID=gene-LDO38_RS26905;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=LDO38_RS26905;old_locus_tag=BVI2075_800015 NZ_CAJZAL010000186.1 Protein Homology CDS 11948 13840 . - 0 ID=cds-WP_059696650.1;Parent=gene-LDO38_RS26905;Dbxref=GenBank:WP_059696650.1;Name=WP_059696650.1;Ontology_term=GO:0006750,GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione biosynthetic process|0006750||IEA,glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477697.1;locus_tag=LDO38_RS26905;product=gamma-glutamyltransferase;protein_id=WP_059696650.1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 14069 15031 . - . ID=gene-LDO38_RS26910;Name=LDO38_RS26910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26910;old_locus_tag=BVI2075_800016 NZ_CAJZAL010000186.1 Protein Homology CDS 14069 15031 . - 0 ID=cds-WP_014723717.1;Parent=gene-LDO38_RS26910;Dbxref=GenBank:WP_014723717.1;Name=WP_014723717.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353323.1;locus_tag=LDO38_RS26910;product=LysR family transcriptional regulator;protein_id=WP_014723717.1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 15292 17427 . + . ID=gene-LDO38_RS26915;Name=LDO38_RS26915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26915;old_locus_tag=BVI2075_800018 NZ_CAJZAL010000186.1 Protein Homology CDS 15292 17427 . + 0 ID=cds-WP_069246336.1;Parent=gene-LDO38_RS26915;Dbxref=GenBank:WP_069246336.1;Name=WP_069246336.1;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411006.1;locus_tag=LDO38_RS26915;product=3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein;protein_id=WP_069246336.1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 17457 18653 . + . ID=gene-LDO38_RS26920;Name=LDO38_RS26920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26920;old_locus_tag=BVI2075_800019 NZ_CAJZAL010000186.1 Protein Homology CDS 17457 18653 . + 0 ID=cds-WP_011886129.1;Parent=gene-LDO38_RS26920;Dbxref=GenBank:WP_011886129.1;Name=WP_011886129.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851010.1;locus_tag=LDO38_RS26920;product=acyl-CoA dehydrogenase family protein;protein_id=WP_011886129.1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 18668 19828 . + . ID=gene-LDO38_RS26925;Name=LDO38_RS26925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26925;old_locus_tag=BVI2075_800020 NZ_CAJZAL010000186.1 Protein Homology CDS 18668 19828 . + 0 ID=cds-WP_176300285.1;Parent=gene-LDO38_RS26925;Dbxref=GenBank:WP_176300285.1;Name=WP_176300285.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364788.1;locus_tag=LDO38_RS26925;product=acyl-CoA dehydrogenase family protein;protein_id=WP_176300285.1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 20301 21590 . + . ID=gene-LDO38_RS26930;Name=LDO38_RS26930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26930;old_locus_tag=BVI2075_800021 NZ_CAJZAL010000186.1 Protein Homology CDS 20301 21590 . + 0 ID=cds-WP_014723711.1;Parent=gene-LDO38_RS26930;Dbxref=GenBank:WP_014723711.1;Name=WP_014723711.1;Ontology_term=GO:0006835,GO:0015293;gbkey=CDS;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398167.1;locus_tag=LDO38_RS26930;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_014723711.1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 21595 23619 . + . ID=gene-LDO38_RS26935;Name=LDO38_RS26935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26935;old_locus_tag=BVI2075_800022 NZ_CAJZAL010000186.1 Protein Homology CDS 21595 23619 . + 0 ID=cds-WP_059463379.1;Parent=gene-LDO38_RS26935;Dbxref=GenBank:WP_059463379.1;Name=WP_059463379.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546290.1;locus_tag=LDO38_RS26935;product=sensor histidine kinase;protein_id=WP_059463379.1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 23780 25135 . + . ID=gene-LDO38_RS26940;Name=LDO38_RS26940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26940;old_locus_tag=BVI2075_800023 NZ_CAJZAL010000186.1 Protein Homology CDS 23780 25135 . + 0 ID=cds-WP_224056716.1;Parent=gene-LDO38_RS26940;Dbxref=GenBank:WP_224056716.1;Name=WP_224056716.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677,GO:0005524;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198029.1;locus_tag=LDO38_RS26940;product=sigma-54-dependent transcriptional regulator;protein_id=WP_224056716.1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 25239 25775 . - . ID=gene-LDO38_RS26945;Name=LDO38_RS26945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26945;old_locus_tag=BVI2075_800024 NZ_CAJZAL010000186.1 Protein Homology CDS 25239 25775 . - 0 ID=cds-WP_011886124.1;Parent=gene-LDO38_RS26945;Dbxref=GenBank:WP_011886124.1;Name=WP_011886124.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886124.1;locus_tag=LDO38_RS26945;product=peroxiredoxin family protein;protein_id=WP_011886124.1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 25938 26510 . + . ID=gene-LDO38_RS26950;Name=LDO38_RS26950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26950;old_locus_tag=BVI2075_800025 NZ_CAJZAL010000186.1 Protein Homology CDS 25938 26510 . + 0 ID=cds-WP_014723708.1;Parent=gene-LDO38_RS26950;Dbxref=GenBank:WP_014723708.1;Name=WP_014723708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364781.1;locus_tag=LDO38_RS26950;product=hypothetical protein;protein_id=WP_014723708.1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 26833 28551 . - . ID=gene-LDO38_RS26955;Name=LDO38_RS26955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26955;old_locus_tag=BVI2075_800027 NZ_CAJZAL010000186.1 Protein Homology CDS 26833 28551 . - 0 ID=cds-WP_176300284.1;Parent=gene-LDO38_RS26955;Dbxref=GenBank:WP_176300284.1;Name=WP_176300284.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546287.1;locus_tag=LDO38_RS26955;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_176300284.1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 28903 29154 . - . ID=gene-LDO38_RS26960;Name=LDO38_RS26960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26960;old_locus_tag=BVI2075_800028 NZ_CAJZAL010000186.1 Protein Homology CDS 28903 29154 . - 0 ID=cds-WP_011886121.1;Parent=gene-LDO38_RS26960;Dbxref=GenBank:WP_011886121.1;Name=WP_011886121.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008351796.1;locus_tag=LDO38_RS26960;product=accessory factor UbiK family protein;protein_id=WP_011886121.1;transl_table=11 NZ_CAJZAL010000186.1 RefSeq gene 29513 29851 . + . ID=gene-LDO38_RS26965;Name=LDO38_RS26965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26965;old_locus_tag=BVI2075_800030 NZ_CAJZAL010000186.1 Protein Homology CDS 29513 29851 . + 0 ID=cds-WP_006398175.1;Parent=gene-LDO38_RS26965;Dbxref=GenBank:WP_006398175.1;Name=WP_006398175.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018436703.1;locus_tag=LDO38_RS26965;product=P-II family nitrogen regulator;protein_id=WP_006398175.1;transl_table=11 ##sequence-region NZ_CAJZAL010000187.1 1 1233 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000187.1 RefSeq region 1 1233 . + . ID=NZ_CAJZAL010000187.1:1..1233;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_81 NZ_CAJZAL010000187.1 RefSeq pseudogene 1 100 . + . ID=gene-LDO38_RS26970;Name=LDO38_RS26970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS26970;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000187.1 Protein Homology CDS 1 100 . + 1 ID=cds-LDO38_RS26970;Parent=gene-LDO38_RS26970;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725157.1;locus_tag=LDO38_RS26970;partial=true;product=alpha/beta fold hydrolase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000187.1 RefSeq pseudogene 684 1069 . + . ID=gene-LDO38_RS26975;Name=LDO38_RS26975;end_range=1069,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS26975;old_locus_tag=BVI2075_810002;partial=true;pseudo=true NZ_CAJZAL010000187.1 Protein Homology CDS 684 1069 . + 0 ID=cds-LDO38_RS26975;Parent=gene-LDO38_RS26975;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1069,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402195.1;locus_tag=LDO38_RS26975;partial=true;product=Crp/Fnr family transcriptional regulator;pseudo=true;transl_table=11 NZ_CAJZAL010000187.1 RefSeq gene 1104 1233 . + . ID=gene-LDO38_RS30690;Name=LDO38_RS30690;end_range=1233,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30690;partial=true NZ_CAJZAL010000187.1 Protein Homology CDS 1104 1233 . + 0 ID=cds-WP_435520994.1;Parent=gene-LDO38_RS30690;Dbxref=GenBank:WP_435520994.1;Name=WP_435520994.1;Ontology_term=GO:0006355,GO:0003677;end_range=1233,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024934.6;locus_tag=LDO38_RS30690;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_435520994.1;transl_table=11 ##sequence-region NZ_CAJZAL010000188.1 1 34656 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000188.1 RefSeq region 1 34656 . + . ID=NZ_CAJZAL010000188.1:1..34656;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_82 NZ_CAJZAL010000188.1 RefSeq gene 1 534 . + . ID=gene-LDO38_RS26980;Name=LDO38_RS26980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26980;old_locus_tag=BVI2075_820002;partial=true;start_range=.,1 NZ_CAJZAL010000188.1 Protein Homology CDS 1 534 . + 0 ID=cds-WP_224056718.1;Parent=gene-LDO38_RS26980;Dbxref=GenBank:WP_224056718.1;Name=WP_224056718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761231.1;locus_tag=LDO38_RS26980;partial=true;product=CHAD domain-containing protein;protein_id=WP_224056718.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 600 1451 . + . ID=gene-LDO38_RS26985;Name=LDO38_RS26985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26985;old_locus_tag=BVI2075_820001 NZ_CAJZAL010000188.1 Protein Homology CDS 600 1451 . + 0 ID=cds-WP_014724640.1;Parent=gene-LDO38_RS26985;Dbxref=GenBank:WP_014724640.1;Name=WP_014724640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365619.1;locus_tag=LDO38_RS26985;product=TOBE domain-containing protein;protein_id=WP_014724640.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 1468 1608 . + . ID=gene-LDO38_RS26990;Name=LDO38_RS26990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26990 NZ_CAJZAL010000188.1 Protein Homology CDS 1468 1608 . + 0 ID=cds-WP_014724641.1;Parent=gene-LDO38_RS26990;Dbxref=GenBank:WP_014724641.1;Name=WP_014724641.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015424.6;locus_tag=LDO38_RS26990;product=TOBE domain-containing protein;protein_id=WP_014724641.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 1849 2550 . - . ID=gene-LDO38_RS26995;Name=LDO38_RS26995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS26995;old_locus_tag=BVI2075_820004 NZ_CAJZAL010000188.1 Protein Homology CDS 1849 2550 . - 0 ID=cds-WP_034194985.1;Parent=gene-LDO38_RS26995;Dbxref=GenBank:WP_034194985.1;Name=WP_034194985.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486467.1;locus_tag=LDO38_RS26995;product=ATP-binding cassette domain-containing protein;protein_id=WP_034194985.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 2633 3310 . - . ID=gene-LDO38_RS27000;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=LDO38_RS27000;old_locus_tag=BVI2075_820005 NZ_CAJZAL010000188.1 Protein Homology CDS 2633 3310 . - 0 ID=cds-WP_041494272.1;Parent=gene-LDO38_RS27000;Dbxref=GenBank:WP_041494272.1;Name=WP_041494272.1;Ontology_term=GO:0015689,GO:0015412,GO:0005886,GO:0055052;gbkey=CDS;gene=modB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479455.1;locus_tag=LDO38_RS27000;product=molybdate ABC transporter permease subunit;protein_id=WP_041494272.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 3321 4118 . - . ID=gene-LDO38_RS27005;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=LDO38_RS27005;old_locus_tag=BVI2075_820006 NZ_CAJZAL010000188.1 Protein Homology CDS 3321 4118 . - 0 ID=cds-WP_014724645.1;Parent=gene-LDO38_RS27005;Dbxref=GenBank:WP_014724645.1;Name=WP_014724645.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753392.1;locus_tag=LDO38_RS27005;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_014724645.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 4257 4952 . - . ID=gene-LDO38_RS27010;Name=LDO38_RS27010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27010;old_locus_tag=BVI2075_820008 NZ_CAJZAL010000188.1 Protein Homology CDS 4257 4952 . - 0 ID=cds-WP_014724646.1;Parent=gene-LDO38_RS27010;Dbxref=GenBank:WP_014724646.1;Name=WP_014724646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765478.1;locus_tag=LDO38_RS27010;product=phosphatase PAP2 family protein;protein_id=WP_014724646.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 5200 6309 . + . ID=gene-LDO38_RS27015;Name=LDO38_RS27015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27015;old_locus_tag=BVI2075_820009 NZ_CAJZAL010000188.1 Protein Homology CDS 5200 6309 . + 0 ID=cds-WP_034194987.1;Parent=gene-LDO38_RS27015;Dbxref=GenBank:WP_034194987.1;Name=WP_034194987.1;Ontology_term=GO:0050526;gbkey=CDS;go_function=poly(3-hydroxybutyrate) depolymerase activity|0050526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658279.1;locus_tag=LDO38_RS27015;product=extracellular catalytic domain type 1 short-chain-length polyhydroxyalkanoate depolymerase;protein_id=WP_034194987.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 6391 6567 . + . ID=gene-LDO38_RS27020;Name=LDO38_RS27020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27020;old_locus_tag=BVI2075_820010 NZ_CAJZAL010000188.1 Protein Homology CDS 6391 6567 . + 0 ID=cds-WP_011881571.1;Parent=gene-LDO38_RS27020;Dbxref=GenBank:WP_011881571.1;Name=WP_011881571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548159.1;locus_tag=LDO38_RS27020;product=DUF3563 family protein;protein_id=WP_011881571.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 6679 7098 . - . ID=gene-LDO38_RS27025;Name=LDO38_RS27025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27025;old_locus_tag=BVI2075_820011 NZ_CAJZAL010000188.1 Protein Homology CDS 6679 7098 . - 0 ID=cds-WP_014724648.1;Parent=gene-LDO38_RS27025;Dbxref=GenBank:WP_014724648.1;Name=WP_014724648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900033.1;locus_tag=LDO38_RS27025;product=organic hydroperoxide resistance protein;protein_id=WP_014724648.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 7248 7700 . - . ID=gene-LDO38_RS27030;Name=LDO38_RS27030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27030;old_locus_tag=BVI2075_820013 NZ_CAJZAL010000188.1 Protein Homology CDS 7248 7700 . - 0 ID=cds-WP_014724649.1;Parent=gene-LDO38_RS27030;Dbxref=GenBank:WP_014724649.1;Name=WP_014724649.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724649.1;locus_tag=LDO38_RS27030;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_014724649.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 7862 8671 . - . ID=gene-LDO38_RS27035;Name=LDO38_RS27035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27035;old_locus_tag=BVI2075_820014 NZ_CAJZAL010000188.1 Protein Homology CDS 7862 8671 . - 0 ID=cds-WP_011881574.1;Parent=gene-LDO38_RS27035;Dbxref=GenBank:WP_011881574.1;Name=WP_011881574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496010.1;locus_tag=LDO38_RS27035;product=BPSS1780 family membrane protein;protein_id=WP_011881574.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 8662 9660 . - . ID=gene-LDO38_RS27040;Name=LDO38_RS27040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27040;old_locus_tag=BVI2075_820015 NZ_CAJZAL010000188.1 Protein Homology CDS 8662 9660 . - 0 ID=cds-WP_011881575.1;Parent=gene-LDO38_RS27040;Dbxref=GenBank:WP_011881575.1;Name=WP_011881575.1;Ontology_term=GO:0009088,GO:0004413;gbkey=CDS;go_function=homoserine kinase activity|0004413||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254414.1;locus_tag=LDO38_RS27040;product=homoserine kinase;protein_id=WP_011881575.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 9763 10167 . - . ID=gene-LDO38_RS27045;Name=LDO38_RS27045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27045;old_locus_tag=BVI2075_820017 NZ_CAJZAL010000188.1 Protein Homology CDS 9763 10167 . - 0 ID=cds-WP_011881576.1;Parent=gene-LDO38_RS27045;Dbxref=GenBank:WP_011881576.1;Name=WP_011881576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010110125.1;locus_tag=LDO38_RS27045;product=hypothetical protein;protein_id=WP_011881576.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 10309 11835 . + . ID=gene-LDO38_RS27050;Name=LDO38_RS27050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27050;old_locus_tag=BVI2075_820016 NZ_CAJZAL010000188.1 Protein Homology CDS 10309 11835 . + 0 ID=cds-WP_014724651.1;Parent=gene-LDO38_RS27050;Dbxref=GenBank:WP_014724651.1;Name=WP_014724651.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529041.1;locus_tag=LDO38_RS27050;product=AMP nucleosidase;protein_id=WP_014724651.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 11952 12230 . - . ID=gene-LDO38_RS27055;Name=LDO38_RS27055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27055;old_locus_tag=BVI2075_820018 NZ_CAJZAL010000188.1 Protein Homology CDS 11952 12230 . - 0 ID=cds-WP_011881578.1;Parent=gene-LDO38_RS27055;Dbxref=GenBank:WP_011881578.1;Name=WP_011881578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900025.1;locus_tag=LDO38_RS27055;product=hypothetical protein;protein_id=WP_011881578.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 12613 13371 . - . ID=gene-LDO38_RS27060;Name=LDO38_RS27060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27060;old_locus_tag=BVI2075_820019 NZ_CAJZAL010000188.1 Protein Homology CDS 12613 13371 . - 0 ID=cds-WP_011881579.1;Parent=gene-LDO38_RS27060;Dbxref=GenBank:WP_011881579.1;Name=WP_011881579.1;Ontology_term=GO:0009691,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881579.1;locus_tag=LDO38_RS27060;product=TIGR00730 family Rossman fold protein;protein_id=WP_011881579.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 13373 16126 . + . ID=gene-LDO38_RS27065;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=LDO38_RS27065;old_locus_tag=BVI2075_820020 NZ_CAJZAL010000188.1 Protein Homology CDS 13373 16126 . + 0 ID=cds-WP_034194991.1;Parent=gene-LDO38_RS27065;Dbxref=GenBank:WP_034194991.1;Name=WP_034194991.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761695.1;locus_tag=LDO38_RS27065;product=DNA polymerase I;protein_id=WP_034194991.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 16404 17738 . + . ID=gene-LDO38_RS27070;Name=LDO38_RS27070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27070;old_locus_tag=BVI2075_820021 NZ_CAJZAL010000188.1 Protein Homology CDS 16404 17738 . + 0 ID=cds-WP_046424659.1;Parent=gene-LDO38_RS27070;Dbxref=GenBank:WP_046424659.1;Name=WP_046424659.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190401.1;locus_tag=LDO38_RS27070;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_046424659.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 18102 18977 . + . ID=gene-LDO38_RS27075;Name=LDO38_RS27075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27075;old_locus_tag=BVI2075_820022 NZ_CAJZAL010000188.1 Protein Homology CDS 18102 18977 . + 0 ID=cds-WP_014724693.1;Parent=gene-LDO38_RS27075;Dbxref=GenBank:WP_014724693.1;Name=WP_014724693.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414604.1;locus_tag=LDO38_RS27075;product=dienelactone hydrolase family protein;protein_id=WP_014724693.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 19027 19896 . - . ID=gene-LDO38_RS27080;Name=LDO38_RS27080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27080;old_locus_tag=BVI2075_820023 NZ_CAJZAL010000188.1 Protein Homology CDS 19027 19896 . - 0 ID=cds-WP_059475539.1;Parent=gene-LDO38_RS27080;Dbxref=GenBank:WP_059475539.1;Name=WP_059475539.1;Ontology_term=GO:0000098,GO:0016783;gbkey=CDS;go_function=sulfurtransferase activity|0016783||IEA;go_process=sulfur amino acid catabolic process|0000098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529026.1;locus_tag=LDO38_RS27080;product=sulfurtransferase;protein_id=WP_059475539.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 20013 21119 . - . ID=gene-LDO38_RS27085;Name=LDO38_RS27085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27085;old_locus_tag=BVI2075_820024 NZ_CAJZAL010000188.1 Protein Homology CDS 20013 21119 . - 0 ID=cds-WP_014724695.1;Parent=gene-LDO38_RS27085;Dbxref=GenBank:WP_014724695.1;Name=WP_014724695.1;Ontology_term=GO:0005506,GO:0016705,GO:0051537;gbkey=CDS;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486437.1;locus_tag=LDO38_RS27085;product=aromatic ring-hydroxylating oxygenase subunit alpha;protein_id=WP_014724695.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 21390 21683 . + . ID=gene-LDO38_RS27090;Name=LDO38_RS27090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27090;old_locus_tag=BVI2075_820025 NZ_CAJZAL010000188.1 Protein Homology CDS 21390 21683 . + 0 ID=cds-WP_011881587.1;Parent=gene-LDO38_RS27090;Dbxref=GenBank:WP_011881587.1;Name=WP_011881587.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399451.1;locus_tag=LDO38_RS27090;product=exodeoxyribonuclease VII small subunit;protein_id=WP_011881587.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 21680 22564 . + . ID=gene-LDO38_RS27095;Name=LDO38_RS27095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27095;old_locus_tag=BVI2075_820026 NZ_CAJZAL010000188.1 Protein Homology CDS 21680 22564 . + 0 ID=cds-WP_011881588.1;Parent=gene-LDO38_RS27095;Dbxref=GenBank:WP_011881588.1;Name=WP_011881588.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486453.1;locus_tag=LDO38_RS27095;product=polyprenyl synthetase family protein;protein_id=WP_011881588.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 22645 24549 . + . ID=gene-LDO38_RS27100;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=LDO38_RS27100;old_locus_tag=BVI2075_820027 NZ_CAJZAL010000188.1 Protein Homology CDS 22645 24549 . + 0 ID=cds-WP_014724697.1;Parent=gene-LDO38_RS27100;Dbxref=GenBank:WP_014724697.1;Name=WP_014724697.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338492.1;locus_tag=LDO38_RS27100;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_014724697.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 24672 25481 . + . ID=gene-LDO38_RS27105;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=LDO38_RS27105;old_locus_tag=BVI2075_820028 NZ_CAJZAL010000188.1 Protein Homology CDS 24672 25481 . + 0 ID=cds-WP_011881590.1;Parent=gene-LDO38_RS27105;Dbxref=GenBank:WP_011881590.1;Name=WP_011881590.1;Ontology_term=GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760425.1;locus_tag=LDO38_RS27105;product=GTP cyclohydrolase FolE2;protein_id=WP_011881590.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 25595 26635 . - . ID=gene-LDO38_RS27110;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=LDO38_RS27110;old_locus_tag=BVI2075_820029 NZ_CAJZAL010000188.1 Protein Homology CDS 25595 26635 . - 0 ID=cds-WP_034194992.1;Parent=gene-LDO38_RS27110;Dbxref=GenBank:WP_034194992.1;Name=WP_034194992.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027813.1;locus_tag=LDO38_RS27110;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_034194992.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 26634 27983 . + . ID=gene-LDO38_RS27115;Name=LDO38_RS27115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27115;old_locus_tag=BVI2075_820030 NZ_CAJZAL010000188.1 Protein Homology CDS 26634 27983 . + 0 ID=cds-WP_257786158.1;Parent=gene-LDO38_RS27115;Dbxref=GenBank:WP_257786158.1;Name=WP_257786158.1;Ontology_term=GO:0000166,GO:0050660,GO:0050661;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027812.1;locus_tag=LDO38_RS27115;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_257786158.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 28089 28301 . + . ID=gene-LDO38_RS27120;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=LDO38_RS27120;old_locus_tag=BVI2075_820031 NZ_CAJZAL010000188.1 Protein Homology CDS 28089 28301 . + 0 ID=cds-WP_006479415.1;Parent=gene-LDO38_RS27120;Dbxref=GenBank:WP_006479415.1;Name=WP_006479415.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011903537.1;locus_tag=LDO38_RS27120;product=30S ribosomal protein S21;protein_id=WP_006479415.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 28487 28933 . + . ID=gene-LDO38_RS27125;Name=LDO38_RS27125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27125;old_locus_tag=BVI2075_820032 NZ_CAJZAL010000188.1 Protein Homology CDS 28487 28933 . + 0 ID=cds-WP_011881593.1;Parent=gene-LDO38_RS27125;Dbxref=GenBank:WP_011881593.1;Name=WP_011881593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881593.1;locus_tag=LDO38_RS27125;product=GatB/YqeY domain-containing protein;protein_id=WP_011881593.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 29007 30878 . + . ID=gene-LDO38_RS27130;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=LDO38_RS27130;old_locus_tag=BVI2075_820033 NZ_CAJZAL010000188.1 Protein Homology CDS 29007 30878 . + 0 ID=cds-WP_014724700.1;Parent=gene-LDO38_RS27130;Dbxref=GenBank:WP_014724700.1;Name=WP_014724700.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765502.1;locus_tag=LDO38_RS27130;product=DNA primase;protein_id=WP_014724700.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 30967 33396 . + . ID=gene-LDO38_RS27135;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=LDO38_RS27135;old_locus_tag=BVI2075_820035 NZ_CAJZAL010000188.1 Protein Homology CDS 30967 33396 . + 0 ID=cds-WP_072465298.1;Parent=gene-LDO38_RS27135;Dbxref=GenBank:WP_072465298.1;Name=WP_072465298.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658300.1;locus_tag=LDO38_RS27135;product=RNA polymerase sigma factor RpoD;protein_id=WP_072465298.1;transl_table=11 NZ_CAJZAL010000188.1 RefSeq gene 33536 33614 . + . ID=gene-LDO38_RS27140;Name=LDO38_RS27140;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS27140;old_locus_tag=BVI2075_TRNA25 NZ_CAJZAL010000188.1 tRNAscan-SE tRNA 33536 33614 . + . ID=rna-LDO38_RS27140;Parent=gene-LDO38_RS27140;anticodon=(pos:33572..33574);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS27140;product=tRNA-Ile NZ_CAJZAL010000188.1 tRNAscan-SE exon 33536 33614 . + . ID=exon-LDO38_RS27140-1;Parent=rna-LDO38_RS27140;anticodon=(pos:33572..33574);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS27140;product=tRNA-Ile NZ_CAJZAL010000188.1 RefSeq pseudogene 33829 34656 . - . ID=gene-LDO38_RS27145;Name=LDO38_RS27145;end_range=34656,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS27145;old_locus_tag=BVI2075_820036;partial=true;pseudo=true NZ_CAJZAL010000188.1 Protein Homology CDS 33829 34656 . - 0 ID=cds-LDO38_RS27145;Parent=gene-LDO38_RS27145;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=34656,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877615.1;locus_tag=LDO38_RS27145;partial=true;product=TniQ family protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000189.1 1 12120 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000189.1 RefSeq region 1 12120 . + . ID=NZ_CAJZAL010000189.1:1..12120;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_83 NZ_CAJZAL010000189.1 RefSeq gene 90 2324 . + . ID=gene-LDO38_RS27150;Name=LDO38_RS27150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27150;old_locus_tag=BVI2075_830001 NZ_CAJZAL010000189.1 Protein Homology CDS 90 2324 . + 0 ID=cds-WP_059463750.1;Parent=gene-LDO38_RS27150;Dbxref=GenBank:WP_059463750.1;Name=WP_059463750.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750788.1;locus_tag=LDO38_RS27150;product=TonB-dependent siderophore receptor;protein_id=WP_059463750.1;transl_table=11 NZ_CAJZAL010000189.1 RefSeq gene 2384 2998 . + . ID=gene-LDO38_RS27155;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=LDO38_RS27155;old_locus_tag=BVI2075_830002 NZ_CAJZAL010000189.1 Protein Homology CDS 2384 2998 . + 0 ID=cds-WP_011881438.1;Parent=gene-LDO38_RS27155;Dbxref=GenBank:WP_011881438.1;Name=WP_011881438.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881438.1;locus_tag=LDO38_RS27155;product=nicotinamide riboside transporter PnuC;protein_id=WP_011881438.1;transl_table=11 NZ_CAJZAL010000189.1 RefSeq gene 3022 4230 . + . ID=gene-LDO38_RS27160;Name=LDO38_RS27160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27160;old_locus_tag=BVI2075_830003 NZ_CAJZAL010000189.1 Protein Homology CDS 3022 4230 . + 0 ID=cds-WP_059605440.1;Parent=gene-LDO38_RS27160;Dbxref=GenBank:WP_059605440.1;Name=WP_059605440.1;Ontology_term=GO:0016310,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724522.1;locus_tag=LDO38_RS27160;product=phosphotransferase enzyme family protein;protein_id=WP_059605440.1;transl_table=11 NZ_CAJZAL010000189.1 RefSeq gene 4680 6794 . - . ID=gene-LDO38_RS27165;Name=LDO38_RS27165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27165;old_locus_tag=BVI2075_830004 NZ_CAJZAL010000189.1 Protein Homology CDS 4680 6794 . - 0 ID=cds-WP_124259901.1;Parent=gene-LDO38_RS27165;Dbxref=GenBank:WP_124259901.1;Name=WP_124259901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724523.1;locus_tag=LDO38_RS27165;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_124259901.1;transl_table=11 NZ_CAJZAL010000189.1 RefSeq gene 6826 8268 . - . ID=gene-LDO38_RS27170;Name=LDO38_RS27170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27170;old_locus_tag=BVI2075_830005 NZ_CAJZAL010000189.1 Protein Homology CDS 6826 8268 . - 0 ID=cds-WP_059463752.1;Parent=gene-LDO38_RS27170;Dbxref=GenBank:WP_059463752.1;Name=WP_059463752.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724524.1;locus_tag=LDO38_RS27170;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_059463752.1;transl_table=11 NZ_CAJZAL010000189.1 RefSeq gene 8273 9046 . - . ID=gene-LDO38_RS27175;Name=LDO38_RS27175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27175;old_locus_tag=BVI2075_830006 NZ_CAJZAL010000189.1 Protein Homology CDS 8273 9046 . - 0 ID=cds-WP_014724525.1;Parent=gene-LDO38_RS27175;Dbxref=GenBank:WP_014724525.1;Name=WP_014724525.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724525.1;locus_tag=LDO38_RS27175;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_014724525.1;transl_table=11 NZ_CAJZAL010000189.1 RefSeq gene 9043 10692 . - . ID=gene-LDO38_RS27180;Name=LDO38_RS27180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27180;old_locus_tag=BVI2075_830007 NZ_CAJZAL010000189.1 Protein Homology CDS 9043 10692 . - 0 ID=cds-WP_072465301.1;Parent=gene-LDO38_RS27180;Dbxref=GenBank:WP_072465301.1;Name=WP_072465301.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690164.1;locus_tag=LDO38_RS27180;product=TolC family protein;protein_id=WP_072465301.1;transl_table=11 NZ_CAJZAL010000189.1 RefSeq gene 10689 12120 . - . ID=gene-LDO38_RS27185;Name=LDO38_RS27185;end_range=12120,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27185;old_locus_tag=BVI2075_830008;partial=true NZ_CAJZAL010000189.1 Protein Homology CDS 10689 12120 . - 1 ID=cds-WP_354003779.1;Parent=gene-LDO38_RS27185;Dbxref=GenBank:WP_354003779.1;Name=WP_354003779.1;end_range=12120,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724527.1;locus_tag=LDO38_RS27185;partial=true;product=putative Ig domain-containing protein;protein_id=WP_354003779.1;transl_table=11 ##sequence-region NZ_CAJZAL010000190.1 1 36611 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000190.1 RefSeq region 1 36611 . + . ID=NZ_CAJZAL010000190.1:1..36611;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_84 NZ_CAJZAL010000190.1 RefSeq gene 1 508 . + . ID=gene-LDO38_RS27190;Name=LDO38_RS27190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27190;old_locus_tag=BVI2075_840002;partial=true;start_range=.,1 NZ_CAJZAL010000190.1 Protein Homology CDS 1 508 . + 1 ID=cds-WP_224056720.1;Parent=gene-LDO38_RS27190;Dbxref=GenBank:WP_224056720.1;Name=WP_224056720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218062.1;locus_tag=LDO38_RS27190;partial=true;product=substrate-binding domain-containing protein;protein_id=WP_224056720.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 621 3110 . - . ID=gene-LDO38_RS27195;Name=LDO38_RS27195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27195;old_locus_tag=BVI2075_840003 NZ_CAJZAL010000190.1 Protein Homology CDS 621 3110 . - 0 ID=cds-WP_059474773.1;Parent=gene-LDO38_RS27195;Dbxref=GenBank:WP_059474773.1;Name=WP_059474773.1;Ontology_term=GO:0050611;gbkey=CDS;go_function=arsenate reductase (azurin) activity|0050611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218063.1;locus_tag=LDO38_RS27195;product=arsenate reductase (azurin) large subunit;protein_id=WP_059474773.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 3122 3628 . - . ID=gene-LDO38_RS27200;Name=LDO38_RS27200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27200;old_locus_tag=BVI2075_840004 NZ_CAJZAL010000190.1 Protein Homology CDS 3122 3628 . - 0 ID=cds-WP_012464909.1;Parent=gene-LDO38_RS27200;Dbxref=GenBank:WP_012464909.1;Name=WP_012464909.1;Ontology_term=GO:0050611;gbkey=CDS;go_function=arsenate reductase (azurin) activity|0050611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012464909.1;locus_tag=LDO38_RS27200;product=arsenate reductase (azurin) small subunit;protein_id=WP_012464909.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 4426 4527 . - . ID=gene-LDO38_RS30220;Name=LDO38_RS30220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30220 NZ_CAJZAL010000190.1 Protein Homology CDS 4426 4527 . - 0 ID=cds-WP_327796267.1;Parent=gene-LDO38_RS30220;Dbxref=GenBank:WP_327796267.1;Name=WP_327796267.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF014814.6;locus_tag=LDO38_RS30220;product=helix-turn-helix domain-containing protein;protein_id=WP_327796267.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 4646 5032 . - . ID=gene-LDO38_RS27205;Name=LDO38_RS27205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27205;old_locus_tag=BVI2075_840006 NZ_CAJZAL010000190.1 Protein Homology CDS 4646 5032 . - 0 ID=cds-WP_012218065.1;Parent=gene-LDO38_RS27205;Dbxref=GenBank:WP_012218065.1;Name=WP_012218065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218065.1;locus_tag=LDO38_RS27205;product=DUF302 domain-containing protein;protein_id=WP_012218065.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 5101 5781 . - . ID=gene-LDO38_RS27210;Name=LDO38_RS27210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27210 NZ_CAJZAL010000190.1 Protein Homology CDS 5101 5781 . - 0 ID=cds-WP_224056721.1;Parent=gene-LDO38_RS27210;Dbxref=GenBank:WP_224056721.1;Name=WP_224056721.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218066.1;locus_tag=LDO38_RS27210;product=c-type cytochrome;protein_id=WP_224056721.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 5974 6504 . - . ID=gene-LDO38_RS27215;Name=LDO38_RS27215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27215;old_locus_tag=BVI2075_840008 NZ_CAJZAL010000190.1 Protein Homology CDS 5974 6504 . - 0 ID=cds-WP_059474774.1;Parent=gene-LDO38_RS27215;Dbxref=GenBank:WP_059474774.1;Name=WP_059474774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218067.1;locus_tag=LDO38_RS27215;product=hypothetical protein;protein_id=WP_059474774.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 6820 9759 . - . ID=gene-LDO38_RS27220;Name=LDO38_RS27220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27220;old_locus_tag=BVI2075_840009 NZ_CAJZAL010000190.1 Protein Homology CDS 6820 9759 . - 0 ID=cds-WP_059474793.1;Parent=gene-LDO38_RS27220;Dbxref=GenBank:WP_059474793.1;Name=WP_059474793.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218068.1;locus_tag=LDO38_RS27220;product=Tn3 family transposase;protein_id=WP_059474793.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 10065 10376 . - . ID=gene-LDO38_RS27225;Name=LDO38_RS27225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27225;old_locus_tag=BVI2075_840010 NZ_CAJZAL010000190.1 Protein Homology CDS 10065 10376 . - 0 ID=cds-WP_224056722.1;Parent=gene-LDO38_RS27225;Dbxref=GenBank:WP_224056722.1;Name=WP_224056722.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218069.1;locus_tag=LDO38_RS27225;product=P-II family nitrogen regulator;protein_id=WP_224056722.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 10566 10916 . - . ID=gene-LDO38_RS27230;Name=LDO38_RS27230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27230;old_locus_tag=BVI2075_840011 NZ_CAJZAL010000190.1 Protein Homology CDS 10566 10916 . - 0 ID=cds-WP_012218070.1;Parent=gene-LDO38_RS27230;Dbxref=GenBank:WP_012218070.1;Name=WP_012218070.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218070.1;locus_tag=LDO38_RS27230;product=copper-binding protein;protein_id=WP_012218070.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq pseudogene 10913 11581 . - . ID=gene-LDO38_RS27235;Name=LDO38_RS27235;end_range=11581,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS27235;old_locus_tag=BVI2075_840012;partial=true;pseudo=true NZ_CAJZAL010000190.1 Protein Homology CDS 10913 11581 . - 0 ID=cds-LDO38_RS27235;Parent=gene-LDO38_RS27235;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=11581,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012211075.1;locus_tag=LDO38_RS27235;partial=true;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 11641 12228 . - . ID=gene-LDO38_RS27240;Name=LDO38_RS27240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27240 NZ_CAJZAL010000190.1 Protein Homology CDS 11641 12228 . - 0 ID=cds-WP_330765171.1;Parent=gene-LDO38_RS27240;Dbxref=GenBank:WP_330765171.1;Name=WP_330765171.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018259.6;locus_tag=LDO38_RS27240;product=TniQ family protein;protein_id=WP_330765171.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 12146 13015 . - . ID=gene-LDO38_RS27245;Name=LDO38_RS27245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27245;old_locus_tag=BVI2075_840013 NZ_CAJZAL010000190.1 Protein Homology CDS 12146 13015 . - 0 ID=cds-WP_009687734.1;Parent=gene-LDO38_RS27245;Dbxref=GenBank:WP_009687734.1;Name=WP_009687734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482415.1;locus_tag=LDO38_RS27245;product=TniB family NTP-binding protein;protein_id=WP_009687734.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 13024 14652 . - . ID=gene-LDO38_RS27250;Name=LDO38_RS27250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27250 NZ_CAJZAL010000190.1 Protein Homology CDS 13024 14652 . - 0 ID=cds-WP_059474794.1;Parent=gene-LDO38_RS27250;Dbxref=GenBank:WP_059474794.1;Name=WP_059474794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367250.1;locus_tag=LDO38_RS27250;product=Mu transposase C-terminal domain-containing protein;protein_id=WP_059474794.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 14924 15457 . + . ID=gene-LDO38_RS27255;Name=LDO38_RS27255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27255;old_locus_tag=BVI2075_840015 NZ_CAJZAL010000190.1 Protein Homology CDS 14924 15457 . + 0 ID=cds-WP_059474776.1;Parent=gene-LDO38_RS27255;Dbxref=GenBank:WP_059474776.1;Name=WP_059474776.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF012382.6;locus_tag=LDO38_RS27255;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_059474776.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq pseudogene 15729 15851 . - . ID=gene-LDO38_RS27260;Name=LDO38_RS27260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS27260;partial=true;pseudo=true;start_range=.,15729 NZ_CAJZAL010000190.1 Protein Homology CDS 15729 15851 . - 0 ID=cds-LDO38_RS27260;Parent=gene-LDO38_RS27260;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611235.1;locus_tag=LDO38_RS27260;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,15729;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 15977 17737 . - . ID=gene-LDO38_RS27265;Name=LDO38_RS27265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27265;old_locus_tag=BVI2075_840017 NZ_CAJZAL010000190.1 Protein Homology CDS 15977 17737 . - 0 ID=cds-WP_059474778.1;Parent=gene-LDO38_RS27265;Dbxref=GenBank:WP_059474778.1;Name=WP_059474778.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.6;locus_tag=LDO38_RS27265;product=amino acid adenylation domain-containing protein;protein_id=WP_059474778.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 17751 20531 . - . ID=gene-LDO38_RS27270;Name=LDO38_RS27270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27270;old_locus_tag=BVI2075_840018 NZ_CAJZAL010000190.1 Protein Homology CDS 17751 20531 . - 0 ID=cds-WP_354003780.1;Parent=gene-LDO38_RS27270;Dbxref=GenBank:WP_354003780.1;Name=WP_354003780.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.6;locus_tag=LDO38_RS27270;product=beta-ketoacyl synthase N-terminal-like domain-containing protein;protein_id=WP_354003780.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 20615 20929 . - . ID=gene-LDO38_RS27275;Name=LDO38_RS27275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27275;old_locus_tag=BVI2075_840019 NZ_CAJZAL010000190.1 Protein Homology CDS 20615 20929 . - 0 ID=cds-WP_059474780.1;Parent=gene-LDO38_RS27275;Dbxref=GenBank:WP_059474780.1;Name=WP_059474780.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019491.6;locus_tag=LDO38_RS27275;product=Dabb family protein;protein_id=WP_059474780.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 20914 23550 . - . ID=gene-LDO38_RS27280;Name=LDO38_RS27280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27280;old_locus_tag=BVI2075_840020 NZ_CAJZAL010000190.1 Protein Homology CDS 20914 23550 . - 0 ID=cds-WP_196480610.1;Parent=gene-LDO38_RS27280;Dbxref=GenBank:WP_196480610.1;Name=WP_196480610.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012337.6;locus_tag=LDO38_RS27280;product=beta-ketoacyl synthase N-terminal-like domain-containing protein;protein_id=WP_196480610.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 23588 23965 . - . ID=gene-LDO38_RS27285;Name=LDO38_RS27285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27285;old_locus_tag=BVI2075_840021 NZ_CAJZAL010000190.1 Protein Homology CDS 23588 23965 . - 0 ID=cds-WP_059568645.1;Parent=gene-LDO38_RS27285;Dbxref=GenBank:WP_059568645.1;Name=WP_059568645.1;Ontology_term=GO:0030638;gbkey=CDS;go_process=polyketide metabolic process|0030638||IEA;inference=COORDINATES: protein motif:HMM:NF019013.6;locus_tag=LDO38_RS27285;product=ester cyclase;protein_id=WP_059568645.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 23950 24855 . - . ID=gene-LDO38_RS27290;Name=LDO38_RS27290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27290;old_locus_tag=BVI2075_840022 NZ_CAJZAL010000190.1 Protein Homology CDS 23950 24855 . - 0 ID=cds-WP_059474783.1;Parent=gene-LDO38_RS27290;Dbxref=GenBank:WP_059474783.1;Name=WP_059474783.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013961.7;locus_tag=LDO38_RS27290;product=transglutaminase domain-containing protein;protein_id=WP_059474783.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 24836 26533 . - . ID=gene-LDO38_RS27295;Name=LDO38_RS27295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27295;old_locus_tag=BVI2075_840023 NZ_CAJZAL010000190.1 Protein Homology CDS 24836 26533 . - 0 ID=cds-WP_059474784.1;Parent=gene-LDO38_RS27295;Dbxref=GenBank:WP_059474784.1;Name=WP_059474784.1;Ontology_term=GO:0019184,GO:0044550,GO:0016874,GO:0031177;gbkey=CDS;go_function=ligase activity|0016874||IEA,phosphopantetheine binding|0031177||IEA;go_process=nonribosomal peptide biosynthetic process|0019184||IEA,secondary metabolite biosynthetic process|0044550||IEA;inference=COORDINATES: protein motif:HMM:NF012711.6;locus_tag=LDO38_RS27295;product=non-ribosomal peptide synthetase;protein_id=WP_059474784.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 26649 27395 . - . ID=gene-LDO38_RS27300;Name=LDO38_RS27300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27300;old_locus_tag=BVI2075_840024 NZ_CAJZAL010000190.1 Protein Homology CDS 26649 27395 . - 0 ID=cds-WP_081056092.1;Parent=gene-LDO38_RS27300;Dbxref=GenBank:WP_081056092.1;Name=WP_081056092.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009905252.1;locus_tag=LDO38_RS27300;product=ABC transporter permease;protein_id=WP_081056092.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 27392 28366 . - . ID=gene-LDO38_RS27305;Name=LDO38_RS27305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27305;old_locus_tag=BVI2075_840025 NZ_CAJZAL010000190.1 Protein Homology CDS 27392 28366 . - 0 ID=cds-WP_081056093.1;Parent=gene-LDO38_RS27305;Dbxref=GenBank:WP_081056093.1;Name=WP_081056093.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.6;locus_tag=LDO38_RS27305;product=ABC transporter ATP-binding protein;protein_id=WP_081056093.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 29200 30111 . + . ID=gene-LDO38_RS27310;Name=LDO38_RS27310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27310;old_locus_tag=BVI2075_840026 NZ_CAJZAL010000190.1 GeneMarkS-2+ CDS 29200 30111 . + 0 ID=cds-WP_224056723.1;Parent=gene-LDO38_RS27310;Dbxref=GenBank:WP_224056723.1;Name=WP_224056723.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS27310;product=ferritin-like domain-containing protein;protein_id=WP_224056723.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 30141 30374 . + . ID=gene-LDO38_RS27315;Name=LDO38_RS27315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27315;old_locus_tag=BVI2075_840027 NZ_CAJZAL010000190.1 Protein Homology CDS 30141 30374 . + 0 ID=cds-WP_059474787.1;Parent=gene-LDO38_RS27315;Dbxref=GenBank:WP_059474787.1;Name=WP_059474787.1;Ontology_term=GO:0005506,GO:0009055;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;inference=COORDINATES: protein motif:HMM:NF024763.6;locus_tag=LDO38_RS27315;product=ferredoxin;protein_id=WP_059474787.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 30468 31367 . + . ID=gene-LDO38_RS27320;Name=LDO38_RS27320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27320;old_locus_tag=BVI2075_840028 NZ_CAJZAL010000190.1 GeneMarkS-2+ CDS 30468 31367 . + 0 ID=cds-WP_155625213.1;Parent=gene-LDO38_RS27320;Dbxref=GenBank:WP_155625213.1;Name=WP_155625213.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS27320;product=ferritin-like domain-containing protein;protein_id=WP_155625213.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 31503 33377 . + . ID=gene-LDO38_RS27325;Name=LDO38_RS27325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27325;old_locus_tag=BVI2075_840029 NZ_CAJZAL010000190.1 Protein Homology CDS 31503 33377 . + 0 ID=cds-WP_059474789.1;Parent=gene-LDO38_RS27325;Dbxref=GenBank:WP_059474789.1;Name=WP_059474789.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: protein motif:HMM:NF012656.6;locus_tag=LDO38_RS27325;product=acyl-CoA dehydrogenase family protein;protein_id=WP_059474789.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 33432 34274 . + . ID=gene-LDO38_RS27330;Name=LDO38_RS27330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27330;old_locus_tag=BVI2075_840030 NZ_CAJZAL010000190.1 Protein Homology CDS 33432 34274 . + 0 ID=cds-WP_081056095.1;Parent=gene-LDO38_RS27330;Dbxref=GenBank:WP_081056095.1;Name=WP_081056095.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF014912.6;locus_tag=LDO38_RS27330;product=ferritin family protein;protein_id=WP_081056095.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 34322 35983 . + . ID=gene-LDO38_RS27335;Name=LDO38_RS27335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27335;old_locus_tag=BVI2075_840031 NZ_CAJZAL010000190.1 Protein Homology CDS 34322 35983 . + 0 ID=cds-WP_059474791.1;Parent=gene-LDO38_RS27335;Dbxref=GenBank:WP_059474791.1;Name=WP_059474791.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.6;locus_tag=LDO38_RS27335;product=AMP-binding protein;protein_id=WP_059474791.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq gene 36007 36279 . + . ID=gene-LDO38_RS27340;Name=LDO38_RS27340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27340;old_locus_tag=BVI2075_840032 NZ_CAJZAL010000190.1 GeneMarkS-2+ CDS 36007 36279 . + 0 ID=cds-WP_155625214.1;Parent=gene-LDO38_RS27340;Dbxref=GenBank:WP_155625214.1;Name=WP_155625214.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS27340;product=phosphopantetheine-binding protein;protein_id=WP_155625214.1;transl_table=11 NZ_CAJZAL010000190.1 RefSeq pseudogene 36322 36479 . - . ID=gene-LDO38_RS27345;Name=LDO38_RS27345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS27345;partial=true;pseudo=true;start_range=.,36322 NZ_CAJZAL010000190.1 Protein Homology CDS 36322 36479 . - 0 ID=cds-LDO38_RS27345;Parent=gene-LDO38_RS27345;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011872570.1;locus_tag=LDO38_RS27345;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,36322;transl_table=11 ##sequence-region NZ_CAJZAL010000191.1 1 30253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000191.1 RefSeq region 1 30253 . + . ID=NZ_CAJZAL010000191.1:1..30253;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_85 NZ_CAJZAL010000191.1 RefSeq gene 1 1046 . - . ID=gene-LDO38_RS27350;Name=LDO38_RS27350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27350;partial=true;start_range=.,1 NZ_CAJZAL010000191.1 Protein Homology CDS 1 1046 . - 0 ID=cds-WP_224056726.1;Parent=gene-LDO38_RS27350;Dbxref=GenBank:WP_224056726.1;Name=WP_224056726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886191.1;locus_tag=LDO38_RS27350;partial=true;product=LysR substrate-binding domain-containing protein;protein_id=WP_224056726.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 1153 2646 . + . ID=gene-LDO38_RS27355;Name=LDO38_RS27355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27355;old_locus_tag=BVI2075_850002 NZ_CAJZAL010000191.1 Protein Homology CDS 1153 2646 . + 0 ID=cds-WP_224056727.1;Parent=gene-LDO38_RS27355;Dbxref=GenBank:WP_224056727.1;Name=WP_224056727.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886192.1;locus_tag=LDO38_RS27355;product=MFS transporter;protein_id=WP_224056727.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 2824 5049 . - . ID=gene-LDO38_RS27360;Name=LDO38_RS27360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27360;old_locus_tag=BVI2075_850003 NZ_CAJZAL010000191.1 Protein Homology CDS 2824 5049 . - 0 ID=cds-WP_176000442.1;Parent=gene-LDO38_RS27360;Dbxref=GenBank:WP_176000442.1;Name=WP_176000442.1;Ontology_term=GO:0043546;gbkey=CDS;go_function=molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723762.1;locus_tag=LDO38_RS27360;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;protein_id=WP_176000442.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 5046 6044 . - . ID=gene-LDO38_RS27365;Name=LDO38_RS27365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27365;old_locus_tag=BVI2075_850004 NZ_CAJZAL010000191.1 Protein Homology CDS 5046 6044 . - 0 ID=cds-WP_014723763.1;Parent=gene-LDO38_RS27365;Dbxref=GenBank:WP_014723763.1;Name=WP_014723763.1;Ontology_term=GO:0050660,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364849.1;locus_tag=LDO38_RS27365;product=FAD binding domain-containing protein;protein_id=WP_014723763.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 6063 6809 . - . ID=gene-LDO38_RS27370;Name=LDO38_RS27370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27370;old_locus_tag=BVI2075_850005 NZ_CAJZAL010000191.1 Protein Homology CDS 6063 6809 . - 0 ID=cds-WP_059454039.1;Parent=gene-LDO38_RS27370;Dbxref=GenBank:WP_059454039.1;Name=WP_059454039.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329346.1;locus_tag=LDO38_RS27370;product=(2Fe-2S)-binding protein;protein_id=WP_059454039.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 7355 7648 . + . ID=gene-LDO38_RS27375;Name=LDO38_RS27375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27375;old_locus_tag=BVI2075_850006 NZ_CAJZAL010000191.1 Protein Homology CDS 7355 7648 . + 0 ID=cds-WP_046424099.1;Parent=gene-LDO38_RS27375;Dbxref=GenBank:WP_046424099.1;Name=WP_046424099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895862.1;locus_tag=LDO38_RS27375;product=hypothetical protein;protein_id=WP_046424099.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 7698 9818 . + . ID=gene-LDO38_RS27380;Name=LDO38_RS27380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27380;old_locus_tag=BVI2075_850007 NZ_CAJZAL010000191.1 Protein Homology CDS 7698 9818 . + 0 ID=cds-WP_059894325.1;Parent=gene-LDO38_RS27380;Dbxref=GenBank:WP_059894325.1;Name=WP_059894325.1;Ontology_term=GO:0034480;gbkey=CDS;go_function=phosphatidylcholine phospholipase C activity|0034480||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760571.1;locus_tag=LDO38_RS27380;product=phosphocholine-specific phospholipase C;protein_id=WP_059894325.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 9861 10484 . - . ID=gene-LDO38_RS27385;Name=LDO38_RS27385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27385;old_locus_tag=BVI2075_850008 NZ_CAJZAL010000191.1 Protein Homology CDS 9861 10484 . - 0 ID=cds-WP_011886198.1;Parent=gene-LDO38_RS27385;Dbxref=GenBank:WP_011886198.1;Name=WP_011886198.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754267.1;locus_tag=LDO38_RS27385;product=RBBP9/YdeN family alpha/beta hydrolase;protein_id=WP_011886198.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 10728 11165 . + . ID=gene-LDO38_RS27390;Name=LDO38_RS27390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27390;old_locus_tag=BVI2075_850009 NZ_CAJZAL010000191.1 Protein Homology CDS 10728 11165 . + 0 ID=cds-WP_059991980.1;Parent=gene-LDO38_RS27390;Dbxref=GenBank:WP_059991980.1;Name=WP_059991980.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893323.1;locus_tag=LDO38_RS27390;product=VOC family protein;protein_id=WP_059991980.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 11170 12111 . + . ID=gene-LDO38_RS27395;Name=LDO38_RS27395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27395;old_locus_tag=BVI2075_850010 NZ_CAJZAL010000191.1 Protein Homology CDS 11170 12111 . + 0 ID=cds-WP_224056728.1;Parent=gene-LDO38_RS27395;Dbxref=GenBank:WP_224056728.1;Name=WP_224056728.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214267.1;locus_tag=LDO38_RS27395;product=2-hydroxyacid dehydrogenase;protein_id=WP_224056728.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 12141 13073 . + . ID=gene-LDO38_RS27400;Name=LDO38_RS27400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27400;old_locus_tag=BVI2075_850011 NZ_CAJZAL010000191.1 Protein Homology CDS 12141 13073 . + 0 ID=cds-WP_011886201.1;Parent=gene-LDO38_RS27400;Dbxref=GenBank:WP_011886201.1;Name=WP_011886201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886201.1;locus_tag=LDO38_RS27400;product=hydroxymethylglutaryl-CoA lyase;protein_id=WP_011886201.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 13097 13603 . + . ID=gene-LDO38_RS27405;Name=LDO38_RS27405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27405;old_locus_tag=BVI2075_850012 NZ_CAJZAL010000191.1 Protein Homology CDS 13097 13603 . + 0 ID=cds-WP_011886202.1;Parent=gene-LDO38_RS27405;Dbxref=GenBank:WP_011886202.1;Name=WP_011886202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525946.1;locus_tag=LDO38_RS27405;product=YbaK/EbsC family protein;protein_id=WP_011886202.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 13600 13806 . + . ID=gene-LDO38_RS27410;Name=LDO38_RS27410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27410;old_locus_tag=BVI2075_850013 NZ_CAJZAL010000191.1 Protein Homology CDS 13600 13806 . + 0 ID=cds-WP_011886203.1;Parent=gene-LDO38_RS27410;Dbxref=GenBank:WP_011886203.1;Name=WP_011886203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895855.1;locus_tag=LDO38_RS27410;product=DUF1289 domain-containing protein;protein_id=WP_011886203.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 14147 15049 . - . ID=gene-LDO38_RS27415;Name=LDO38_RS27415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27415;old_locus_tag=BVI2075_850015 NZ_CAJZAL010000191.1 Protein Homology CDS 14147 15049 . - 0 ID=cds-WP_069264750.1;Parent=gene-LDO38_RS27415;Dbxref=GenBank:WP_069264750.1;Name=WP_069264750.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546366.1;locus_tag=LDO38_RS27415;product=DMT family transporter;protein_id=WP_069264750.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 15162 15653 . + . ID=gene-LDO38_RS27420;Name=LDO38_RS27420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27420;old_locus_tag=BVI2075_850016 NZ_CAJZAL010000191.1 Protein Homology CDS 15162 15653 . + 0 ID=cds-WP_014723769.1;Parent=gene-LDO38_RS27420;Dbxref=GenBank:WP_014723769.1;Name=WP_014723769.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495467.1;locus_tag=LDO38_RS27420;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_014723769.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 15756 16652 . - . ID=gene-LDO38_RS27425;Name=LDO38_RS27425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27425;old_locus_tag=BVI2075_850017 NZ_CAJZAL010000191.1 Protein Homology CDS 15756 16652 . - 0 ID=cds-WP_011886206.1;Parent=gene-LDO38_RS27425;Dbxref=GenBank:WP_011886206.1;Name=WP_011886206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488641.1;locus_tag=LDO38_RS27425;product=alpha/beta fold hydrolase;protein_id=WP_011886206.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 16927 17886 . + . ID=gene-LDO38_RS27430;Name=LDO38_RS27430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27430;old_locus_tag=BVI2075_850018 NZ_CAJZAL010000191.1 Protein Homology CDS 16927 17886 . + 0 ID=cds-WP_011886207.1;Parent=gene-LDO38_RS27430;Dbxref=GenBank:WP_011886207.1;Name=WP_011886207.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488640.1;locus_tag=LDO38_RS27430;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_011886207.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 18091 19050 . - . ID=gene-LDO38_RS27435;Name=LDO38_RS27435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27435;old_locus_tag=BVI2075_850020 NZ_CAJZAL010000191.1 Protein Homology CDS 18091 19050 . - 0 ID=cds-WP_224056729.1;Parent=gene-LDO38_RS27435;Dbxref=GenBank:WP_224056729.1;Name=WP_224056729.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886208.1;locus_tag=LDO38_RS27435;product=LysR family transcriptional regulator;protein_id=WP_224056729.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 19228 20304 . - . ID=gene-LDO38_RS27440;Name=LDO38_RS27440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27440;old_locus_tag=BVI2075_850021 NZ_CAJZAL010000191.1 Protein Homology CDS 19228 20304 . - 0 ID=cds-WP_011886209.1;Parent=gene-LDO38_RS27440;Dbxref=GenBank:WP_011886209.1;Name=WP_011886209.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407148.1;locus_tag=LDO38_RS27440;product=porin;protein_id=WP_011886209.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 20645 21148 . - . ID=gene-LDO38_RS27445;Name=LDO38_RS27445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27445;old_locus_tag=BVI2075_850022 NZ_CAJZAL010000191.1 Protein Homology CDS 20645 21148 . - 0 ID=cds-WP_034192510.1;Parent=gene-LDO38_RS27445;Dbxref=GenBank:WP_034192510.1;Name=WP_034192510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353418.1;locus_tag=LDO38_RS27445;product=hypothetical protein;protein_id=WP_034192510.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 21505 22542 . + . ID=gene-LDO38_RS27450;Name=LDO38_RS27450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27450;old_locus_tag=BVI2075_850024 NZ_CAJZAL010000191.1 Protein Homology CDS 21505 22542 . + 0 ID=cds-WP_046424086.1;Parent=gene-LDO38_RS27450;Dbxref=GenBank:WP_046424086.1;Name=WP_046424086.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004545944.1;locus_tag=LDO38_RS27450;product=bile acid:sodium symporter family protein;protein_id=WP_046424086.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 22802 24643 . + . ID=gene-LDO38_RS27455;Name=LDO38_RS27455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27455;old_locus_tag=BVI2075_850025 NZ_CAJZAL010000191.1 Protein Homology CDS 22802 24643 . + 0 ID=cds-WP_059668226.1;Parent=gene-LDO38_RS27455;Dbxref=GenBank:WP_059668226.1;Name=WP_059668226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723773.1;locus_tag=LDO38_RS27455;product=EAL domain-containing protein;protein_id=WP_059668226.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 25089 26108 . + . ID=gene-LDO38_RS27460;Name=LDO38_RS27460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27460;old_locus_tag=BVI2075_850027 NZ_CAJZAL010000191.1 Protein Homology CDS 25089 26108 . + 0 ID=cds-WP_014723774.1;Parent=gene-LDO38_RS27460;Dbxref=GenBank:WP_014723774.1;Name=WP_014723774.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398052.1;locus_tag=LDO38_RS27460;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_014723774.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 26105 27385 . + . ID=gene-LDO38_RS27465;Name=LDO38_RS27465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27465;old_locus_tag=BVI2075_850026 NZ_CAJZAL010000191.1 Protein Homology CDS 26105 27385 . + 0 ID=cds-WP_041493907.1;Parent=gene-LDO38_RS27465;Dbxref=GenBank:WP_041493907.1;Name=WP_041493907.1;Ontology_term=GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754116.1;locus_tag=LDO38_RS27465;product=AGE family epimerase/isomerase;protein_id=WP_041493907.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 27382 28290 . + . ID=gene-LDO38_RS27470;Name=LDO38_RS27470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27470;old_locus_tag=BVI2075_850028 NZ_CAJZAL010000191.1 Protein Homology CDS 27382 28290 . + 0 ID=cds-WP_011886215.1;Parent=gene-LDO38_RS27470;Dbxref=GenBank:WP_011886215.1;Name=WP_011886215.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409152.1;locus_tag=LDO38_RS27470;product=carbohydrate kinase family protein;protein_id=WP_011886215.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 28421 28642 . + . ID=gene-LDO38_RS27475;Name=LDO38_RS27475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27475;old_locus_tag=BVI2075_850029 NZ_CAJZAL010000191.1 Protein Homology CDS 28421 28642 . + 0 ID=cds-WP_011886216.1;Parent=gene-LDO38_RS27475;Dbxref=GenBank:WP_011886216.1;Name=WP_011886216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886216.1;locus_tag=LDO38_RS27475;product=hypothetical protein;protein_id=WP_011886216.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 28777 28971 . - . ID=gene-LDO38_RS27480;Name=LDO38_RS27480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27480;old_locus_tag=BVI2075_850030 NZ_CAJZAL010000191.1 Protein Homology CDS 28777 28971 . - 0 ID=cds-WP_011886217.1;Parent=gene-LDO38_RS27480;Dbxref=GenBank:WP_011886217.1;Name=WP_011886217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895841.1;locus_tag=LDO38_RS27480;product=DUF2905 domain-containing protein;protein_id=WP_011886217.1;transl_table=11 NZ_CAJZAL010000191.1 RefSeq gene 28984 30174 . - . ID=gene-LDO38_RS27485;Name=LDO38_RS27485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27485;old_locus_tag=BVI2075_850031 NZ_CAJZAL010000191.1 Protein Homology CDS 28984 30174 . - 0 ID=cds-WP_131753882.1;Parent=gene-LDO38_RS27485;Dbxref=GenBank:WP_131753882.1;Name=WP_131753882.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019256186.1;locus_tag=LDO38_RS27485;product=class I SAM-dependent methyltransferase;protein_id=WP_131753882.1;transl_table=11 ##sequence-region NZ_CAJZAL010000192.1 1 75698 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000192.1 RefSeq region 1 75698 . + . ID=NZ_CAJZAL010000192.1:1..75698;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_86 NZ_CAJZAL010000192.1 RefSeq pseudogene 1 186 . - . ID=gene-LDO38_RS27490;Name=LDO38_RS27490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS27490;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000192.1 Protein Homology CDS 1 186 . - 0 ID=cds-LDO38_RS27490;Parent=gene-LDO38_RS27490;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899100.1;locus_tag=LDO38_RS27490;partial=true;product=PLP-dependent aminotransferase family protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 356 1555 . + . ID=gene-LDO38_RS27495;Name=LDO38_RS27495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27495;old_locus_tag=BVI2075_860002 NZ_CAJZAL010000192.1 Protein Homology CDS 356 1555 . + 0 ID=cds-WP_124260089.1;Parent=gene-LDO38_RS27495;Dbxref=GenBank:WP_124260089.1;Name=WP_124260089.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882336.1;locus_tag=LDO38_RS27495;product=GNAT family N-acetyltransferase;protein_id=WP_124260089.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 2050 3114 . + . ID=gene-LDO38_RS27500;Name=LDO38_RS27500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27500;old_locus_tag=BVI2075_860003 NZ_CAJZAL010000192.1 Protein Homology CDS 2050 3114 . + 0 ID=cds-WP_034195115.1;Parent=gene-LDO38_RS27500;Dbxref=GenBank:WP_034195115.1;Name=WP_034195115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658954.1;locus_tag=LDO38_RS27500;product=2%2C3-butanediol dehydrogenase;protein_id=WP_034195115.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 3613 4269 . + . ID=gene-LDO38_RS27505;Name=LDO38_RS27505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27505;old_locus_tag=BVI2075_860004 NZ_CAJZAL010000192.1 Protein Homology CDS 3613 4269 . + 0 ID=cds-WP_011882339.1;Parent=gene-LDO38_RS27505;Dbxref=GenBank:WP_011882339.1;Name=WP_011882339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366183.1;locus_tag=LDO38_RS27505;product=VC0807 family protein;protein_id=WP_011882339.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 4356 5222 . + . ID=gene-LDO38_RS27510;Name=LDO38_RS27510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27510;old_locus_tag=BVI2075_860005 NZ_CAJZAL010000192.1 Protein Homology CDS 4356 5222 . + 0 ID=cds-WP_014724797.1;Parent=gene-LDO38_RS27510;Dbxref=GenBank:WP_014724797.1;Name=WP_014724797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882340.1;locus_tag=LDO38_RS27510;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_014724797.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 5271 6251 . - . ID=gene-LDO38_RS27515;Name=LDO38_RS27515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27515;old_locus_tag=BVI2075_860007 NZ_CAJZAL010000192.1 Protein Homology CDS 5271 6251 . - 0 ID=cds-WP_059464082.1;Parent=gene-LDO38_RS27515;Dbxref=GenBank:WP_059464082.1;Name=WP_059464082.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658957.1;locus_tag=LDO38_RS27515;product=aldo/keto reductase;protein_id=WP_059464082.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 6406 7080 . - . ID=gene-LDO38_RS27520;Name=LDO38_RS27520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27520;old_locus_tag=BVI2075_860009 NZ_CAJZAL010000192.1 Protein Homology CDS 6406 7080 . - 0 ID=cds-WP_011882342.1;Parent=gene-LDO38_RS27520;Dbxref=GenBank:WP_011882342.1;Name=WP_011882342.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483966.1;locus_tag=LDO38_RS27520;product=MarC family protein;protein_id=WP_011882342.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 7196 7996 . - . ID=gene-LDO38_RS27525;Name=LDO38_RS27525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27525;old_locus_tag=BVI2075_860010 NZ_CAJZAL010000192.1 Protein Homology CDS 7196 7996 . - 0 ID=cds-WP_069246474.1;Parent=gene-LDO38_RS27525;Dbxref=GenBank:WP_069246474.1;Name=WP_069246474.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724795.1;locus_tag=LDO38_RS27525;product=enoyl-CoA hydratase-related protein;protein_id=WP_069246474.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 8037 9359 . - . ID=gene-LDO38_RS27530;Name=paaK;gbkey=Gene;gene=paaK;gene_biotype=protein_coding;locus_tag=LDO38_RS27530;old_locus_tag=BVI2075_860011 NZ_CAJZAL010000192.1 Protein Homology CDS 8037 9359 . - 0 ID=cds-WP_059560598.1;Parent=gene-LDO38_RS27530;Dbxref=GenBank:WP_059560598.1;Name=WP_059560598.1;Ontology_term=GO:0010124,GO:0047475;gbkey=CDS;gene=paaK;go_function=phenylacetate-CoA ligase activity|0047475||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478906.1;locus_tag=LDO38_RS27530;product=phenylacetate--CoA ligase PaaK;protein_id=WP_059560598.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 9418 10971 . - . ID=gene-LDO38_RS27535;Name=LDO38_RS27535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27535;old_locus_tag=BVI2075_860012 NZ_CAJZAL010000192.1 Protein Homology CDS 9418 10971 . - 0 ID=cds-WP_059623076.1;Parent=gene-LDO38_RS27535;Dbxref=GenBank:WP_059623076.1;Name=WP_059623076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754823.1;locus_tag=LDO38_RS27535;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_059623076.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 11058 11462 . + . ID=gene-LDO38_RS27540;Name=LDO38_RS27540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27540 NZ_CAJZAL010000192.1 GeneMarkS-2+ CDS 11058 11462 . + 0 ID=cds-WP_124260076.1;Parent=gene-LDO38_RS27540;Dbxref=GenBank:WP_124260076.1;Name=WP_124260076.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS27540;product=hypothetical protein;protein_id=WP_124260076.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 11502 12590 . + . ID=gene-LDO38_RS27545;Name=LDO38_RS27545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27545;old_locus_tag=BVI2075_860015 NZ_CAJZAL010000192.1 Protein Homology CDS 11502 12590 . + 0 ID=cds-WP_011882346.1;Parent=gene-LDO38_RS27545;Dbxref=GenBank:WP_011882346.1;Name=WP_011882346.1;Ontology_term=GO:0006812,GO:0006816,GO:0008324,GO:0015369,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,calcium:proton antiporter activity|0015369||IEA;go_process=monoatomic cation transport|0006812||IEA,calcium ion transport|0006816||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009976505.1;locus_tag=LDO38_RS27545;product=calcium:proton antiporter;protein_id=WP_011882346.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 12670 13575 . - . ID=gene-LDO38_RS27550;Name=LDO38_RS27550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27550;old_locus_tag=BVI2075_860017 NZ_CAJZAL010000192.1 Protein Homology CDS 12670 13575 . - 0 ID=cds-WP_014724790.1;Parent=gene-LDO38_RS27550;Dbxref=GenBank:WP_014724790.1;Name=WP_014724790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724790.1;locus_tag=LDO38_RS27550;product=LysR substrate-binding domain-containing protein;protein_id=WP_014724790.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 13747 14715 . - . ID=gene-LDO38_RS27555;Name=LDO38_RS27555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27555;old_locus_tag=BVI2075_860018 NZ_CAJZAL010000192.1 Protein Homology CDS 13747 14715 . - 0 ID=cds-WP_011882348.1;Parent=gene-LDO38_RS27555;Dbxref=GenBank:WP_011882348.1;Name=WP_011882348.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329160.1;locus_tag=LDO38_RS27555;product=LysR family transcriptional regulator;protein_id=WP_011882348.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 15010 15138 . - . ID=gene-LDO38_RS30120;Name=LDO38_RS30120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30120 NZ_CAJZAL010000192.1 GeneMarkS-2+ CDS 15010 15138 . - 0 ID=cds-WP_014724788.1;Parent=gene-LDO38_RS30120;Dbxref=GenBank:WP_014724788.1;Name=WP_014724788.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30120;product=hypothetical protein;protein_id=WP_014724788.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 15077 16252 . + . ID=gene-LDO38_RS27560;Name=LDO38_RS27560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27560;old_locus_tag=BVI2075_860020 NZ_CAJZAL010000192.1 Protein Homology CDS 15077 16252 . + 0 ID=cds-WP_041494115.1;Parent=gene-LDO38_RS27560;Dbxref=GenBank:WP_041494115.1;Name=WP_041494115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754166.1;locus_tag=LDO38_RS27560;product=HPP family protein;protein_id=WP_041494115.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 16364 16777 . + . ID=gene-LDO38_RS27565;Name=LDO38_RS27565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27565;old_locus_tag=BVI2075_860021 NZ_CAJZAL010000192.1 Protein Homology CDS 16364 16777 . + 0 ID=cds-WP_011882350.1;Parent=gene-LDO38_RS27565;Dbxref=GenBank:WP_011882350.1;Name=WP_011882350.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899076.1;locus_tag=LDO38_RS27565;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_011882350.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 16806 18593 . + . ID=gene-LDO38_RS27570;Name=LDO38_RS27570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27570;old_locus_tag=BVI2075_860022 NZ_CAJZAL010000192.1 Protein Homology CDS 16806 18593 . + 0 ID=cds-WP_060091254.1;Parent=gene-LDO38_RS27570;Dbxref=GenBank:WP_060091254.1;Name=WP_060091254.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766047.1;locus_tag=LDO38_RS27570;product=chloride channel protein;protein_id=WP_060091254.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 18995 19327 . + . ID=gene-LDO38_RS27575;Name=LDO38_RS27575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27575;old_locus_tag=BVI2075_860024 NZ_CAJZAL010000192.1 Protein Homology CDS 18995 19327 . + 0 ID=cds-WP_174479779.1;Parent=gene-LDO38_RS27575;Dbxref=GenBank:WP_174479779.1;Name=WP_174479779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899074.1;locus_tag=LDO38_RS27575;product=hypothetical protein;protein_id=WP_174479779.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 19449 19769 . - . ID=gene-LDO38_RS27580;Name=LDO38_RS27580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27580;old_locus_tag=BVI2075_860025 NZ_CAJZAL010000192.1 Protein Homology CDS 19449 19769 . - 0 ID=cds-WP_011882353.1;Parent=gene-LDO38_RS27580;Dbxref=GenBank:WP_011882353.1;Name=WP_011882353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658970.1;locus_tag=LDO38_RS27580;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_011882353.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 19933 20835 . - . ID=gene-LDO38_RS27585;Name=LDO38_RS27585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27585;old_locus_tag=BVI2075_860026 NZ_CAJZAL010000192.1 Protein Homology CDS 19933 20835 . - 0 ID=cds-WP_014724784.1;Parent=gene-LDO38_RS27585;Dbxref=GenBank:WP_014724784.1;Name=WP_014724784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603290.1;locus_tag=LDO38_RS27585;product=LysR substrate-binding domain-containing protein;protein_id=WP_014724784.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 21016 21249 . + . ID=gene-LDO38_RS27590;Name=LDO38_RS27590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27590;old_locus_tag=BVI2075_860027 NZ_CAJZAL010000192.1 GeneMarkS-2+ CDS 21016 21249 . + 0 ID=cds-WP_011882355.1;Parent=gene-LDO38_RS27590;Dbxref=GenBank:WP_011882355.1;Name=WP_011882355.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS27590;product=hypothetical protein;protein_id=WP_011882355.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 21292 22614 . + . ID=gene-LDO38_RS27595;Name=LDO38_RS27595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27595;old_locus_tag=BVI2075_860028 NZ_CAJZAL010000192.1 Protein Homology CDS 21292 22614 . + 0 ID=cds-WP_011882356.1;Parent=gene-LDO38_RS27595;Dbxref=GenBank:WP_011882356.1;Name=WP_011882356.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004556566.1;locus_tag=LDO38_RS27595;product=MFS transporter;protein_id=WP_011882356.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 22700 23803 . - . ID=gene-LDO38_RS27600;Name=LDO38_RS27600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27600;old_locus_tag=BVI2075_860029 NZ_CAJZAL010000192.1 Protein Homology CDS 22700 23803 . - 0 ID=cds-WP_011882357.1;Parent=gene-LDO38_RS27600;Dbxref=GenBank:WP_011882357.1;Name=WP_011882357.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494684.1;locus_tag=LDO38_RS27600;product=porin;protein_id=WP_011882357.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 23867 24391 . - . ID=gene-LDO38_RS27605;Name=LDO38_RS27605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27605;old_locus_tag=BVI2075_860030 NZ_CAJZAL010000192.1 Protein Homology CDS 23867 24391 . - 0 ID=cds-WP_224056731.1;Parent=gene-LDO38_RS27605;Dbxref=GenBank:WP_224056731.1;Name=WP_224056731.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766051.1;locus_tag=LDO38_RS27605;product=DoxX family protein;protein_id=WP_224056731.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 24453 25730 . - . ID=gene-LDO38_RS27610;Name=LDO38_RS27610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27610;old_locus_tag=BVI2075_860031 NZ_CAJZAL010000192.1 Protein Homology CDS 24453 25730 . - 0 ID=cds-WP_011882359.1;Parent=gene-LDO38_RS27610;Dbxref=GenBank:WP_011882359.1;Name=WP_011882359.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396899.1;locus_tag=LDO38_RS27610;product=c-type cytochrome;protein_id=WP_011882359.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 25733 27352 . - . ID=gene-LDO38_RS27615;Name=LDO38_RS27615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27615;old_locus_tag=BVI2075_860032 NZ_CAJZAL010000192.1 Protein Homology CDS 25733 27352 . - 0 ID=cds-WP_011882360.1;Parent=gene-LDO38_RS27615;Dbxref=GenBank:WP_011882360.1;Name=WP_011882360.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396898.1;locus_tag=LDO38_RS27615;product=GMC family oxidoreductase;protein_id=WP_011882360.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 27352 27858 . - . ID=gene-LDO38_RS27620;Name=LDO38_RS27620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27620;old_locus_tag=BVI2075_860033 NZ_CAJZAL010000192.1 Protein Homology CDS 27352 27858 . - 0 ID=cds-WP_011882361.1;Parent=gene-LDO38_RS27620;Dbxref=GenBank:WP_011882361.1;Name=WP_011882361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009900299.1;locus_tag=LDO38_RS27620;product=sugar dehydrogenase complex small subunit;protein_id=WP_011882361.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 28161 34220 . + . ID=gene-LDO38_RS27625;Name=LDO38_RS27625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27625;old_locus_tag=BVI2075_860034 NZ_CAJZAL010000192.1 Protein Homology CDS 28161 34220 . + 0 ID=cds-WP_069246473.1;Parent=gene-LDO38_RS27625;Dbxref=GenBank:WP_069246473.1;Name=WP_069246473.1;Ontology_term=GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493377.1;locus_tag=LDO38_RS27625;product=MG2 domain-containing protein;protein_id=WP_069246473.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 34231 36462 . + . ID=gene-LDO38_RS27630;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=LDO38_RS27630;old_locus_tag=BVI2075_860035 NZ_CAJZAL010000192.1 Protein Homology CDS 34231 36462 . + 0 ID=cds-WP_059738428.1;Parent=gene-LDO38_RS27630;Dbxref=GenBank:WP_059738428.1;Name=WP_059738428.1;Ontology_term=GO:0009252,GO:0003824,GO:0009274;gbkey=CDS;gene=pbpC;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724777.1;locus_tag=LDO38_RS27630;product=penicillin-binding protein 1C;protein_id=WP_059738428.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 36587 37267 . + . ID=gene-LDO38_RS27635;Name=LDO38_RS27635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27635;old_locus_tag=BVI2075_860036 NZ_CAJZAL010000192.1 Protein Homology CDS 36587 37267 . + 0 ID=cds-WP_011882364.1;Parent=gene-LDO38_RS27635;Dbxref=GenBank:WP_011882364.1;Name=WP_011882364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366209.1;locus_tag=LDO38_RS27635;product=hypothetical protein;protein_id=WP_011882364.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 37315 38562 . - . ID=gene-LDO38_RS27640;Name=LDO38_RS27640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27640;old_locus_tag=BVI2075_860037 NZ_CAJZAL010000192.1 Protein Homology CDS 37315 38562 . - 0 ID=cds-WP_041494112.1;Parent=gene-LDO38_RS27640;Dbxref=GenBank:WP_041494112.1;Name=WP_041494112.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756332.1;locus_tag=LDO38_RS27640;product=multidrug effflux MFS transporter;protein_id=WP_041494112.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 38985 39524 . + . ID=gene-LDO38_RS27645;Name=LDO38_RS27645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27645;old_locus_tag=BVI2075_860039 NZ_CAJZAL010000192.1 Protein Homology CDS 38985 39524 . + 0 ID=cds-WP_224056730.1;Parent=gene-LDO38_RS27645;Dbxref=GenBank:WP_224056730.1;Name=WP_224056730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415708.1;locus_tag=LDO38_RS27645;product=hypothetical protein;protein_id=WP_224056730.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 39612 40508 . - . ID=gene-LDO38_RS27650;Name=LDO38_RS27650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27650;old_locus_tag=BVI2075_860040 NZ_CAJZAL010000192.1 Protein Homology CDS 39612 40508 . - 0 ID=cds-WP_011882367.1;Parent=gene-LDO38_RS27650;Dbxref=GenBank:WP_011882367.1;Name=WP_011882367.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410345.1;locus_tag=LDO38_RS27650;product=glutamate/aspartate ABC transporter substrate-binding protein;protein_id=WP_011882367.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 40936 42582 . + . ID=gene-LDO38_RS27655;Name=LDO38_RS27655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27655;old_locus_tag=BVI2075_860041 NZ_CAJZAL010000192.1 Protein Homology CDS 40936 42582 . + 0 ID=cds-WP_045577919.1;Parent=gene-LDO38_RS27655;Dbxref=GenBank:WP_045577919.1;Name=WP_045577919.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492903.1;locus_tag=LDO38_RS27655;product=S8 family peptidase;protein_id=WP_045577919.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 43303 46086 . + . ID=gene-LDO38_RS27660;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=LDO38_RS27660;old_locus_tag=BVI2075_860042 NZ_CAJZAL010000192.1 Protein Homology CDS 43303 46086 . + 0 ID=cds-WP_081335136.1;Parent=gene-LDO38_RS27660;Dbxref=GenBank:WP_081335136.1;Name=WP_081335136.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882370.1;locus_tag=LDO38_RS27660;product=magnesium-translocating P-type ATPase;protein_id=WP_081335136.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 46134 46418 . - . ID=gene-LDO38_RS27665;Name=LDO38_RS27665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27665;old_locus_tag=BVI2075_860043 NZ_CAJZAL010000192.1 Protein Homology CDS 46134 46418 . - 0 ID=cds-WP_034195131.1;Parent=gene-LDO38_RS27665;Dbxref=GenBank:WP_034195131.1;Name=WP_034195131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494672.1;locus_tag=LDO38_RS27665;product=hypothetical protein;protein_id=WP_034195131.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 46490 47365 . - . ID=gene-LDO38_RS27670;Name=LDO38_RS27670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27670;old_locus_tag=BVI2075_860044 NZ_CAJZAL010000192.1 Protein Homology CDS 46490 47365 . - 0 ID=cds-WP_060122017.1;Parent=gene-LDO38_RS27670;Dbxref=GenBank:WP_060122017.1;Name=WP_060122017.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478865.1;locus_tag=LDO38_RS27670;product=LysR family transcriptional regulator;protein_id=WP_060122017.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 47435 47701 . + . ID=gene-LDO38_RS27675;Name=LDO38_RS27675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27675;old_locus_tag=BVI2075_860045 NZ_CAJZAL010000192.1 Protein Homology CDS 47435 47701 . + 0 ID=cds-WP_435520995.1;Parent=gene-LDO38_RS27675;Dbxref=GenBank:WP_435520995.1;Name=WP_435520995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756318.1;locus_tag=LDO38_RS27675;product=hypothetical protein;protein_id=WP_435520995.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 47881 48972 . + . ID=gene-LDO38_RS27680;Name=LDO38_RS27680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27680;old_locus_tag=BVI2075_860046 NZ_CAJZAL010000192.1 Protein Homology CDS 47881 48972 . + 0 ID=cds-WP_069246472.1;Parent=gene-LDO38_RS27680;Dbxref=GenBank:WP_069246472.1;Name=WP_069246472.1;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354880.1;locus_tag=LDO38_RS27680;product=serine hydrolase;protein_id=WP_069246472.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 49003 49239 . + . ID=gene-LDO38_RS27685;Name=LDO38_RS27685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27685;old_locus_tag=BVI2075_860047 NZ_CAJZAL010000192.1 Protein Homology CDS 49003 49239 . + 0 ID=cds-WP_046426382.1;Parent=gene-LDO38_RS27685;Dbxref=GenBank:WP_046426382.1;Name=WP_046426382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882375.1;locus_tag=LDO38_RS27685;product=DUF7661 family protein;protein_id=WP_046426382.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 49355 49810 . + . ID=gene-LDO38_RS27690;Name=LDO38_RS27690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27690;old_locus_tag=BVI2075_860048 NZ_CAJZAL010000192.1 Protein Homology CDS 49355 49810 . + 0 ID=cds-WP_046426380.1;Parent=gene-LDO38_RS27690;Dbxref=GenBank:WP_046426380.1;Name=WP_046426380.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478861.1;locus_tag=LDO38_RS27690;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_046426380.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 49881 50444 . + . ID=gene-LDO38_RS27695;Name=LDO38_RS27695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27695;old_locus_tag=BVI2075_860050 NZ_CAJZAL010000192.1 Protein Homology CDS 49881 50444 . + 0 ID=cds-WP_011882377.1;Parent=gene-LDO38_RS27695;Dbxref=GenBank:WP_011882377.1;Name=WP_011882377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396870.1;locus_tag=LDO38_RS27695;product=isochorismatase family protein;protein_id=WP_011882377.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 50441 51880 . + . ID=gene-LDO38_RS27700;Name=LDO38_RS27700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27700;old_locus_tag=BVI2075_860049 NZ_CAJZAL010000192.1 Protein Homology CDS 50441 51880 . + 0 ID=cds-WP_034195136.1;Parent=gene-LDO38_RS27700;Dbxref=GenBank:WP_034195136.1;Name=WP_034195136.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882378.1;locus_tag=LDO38_RS27700;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_034195136.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 51957 53378 . - . ID=gene-LDO38_RS27705;Name=LDO38_RS27705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27705;old_locus_tag=BVI2075_860051 NZ_CAJZAL010000192.1 Protein Homology CDS 51957 53378 . - 0 ID=cds-WP_014724765.1;Parent=gene-LDO38_RS27705;Dbxref=GenBank:WP_014724765.1;Name=WP_014724765.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604151.1;locus_tag=LDO38_RS27705;product=PLP-dependent aminotransferase family protein;protein_id=WP_014724765.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 53541 55865 . + . ID=gene-LDO38_RS27710;Name=LDO38_RS27710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27710;old_locus_tag=BVI2075_860052 NZ_CAJZAL010000192.1 Protein Homology CDS 53541 55865 . + 0 ID=cds-WP_034195138.1;Parent=gene-LDO38_RS27710;Dbxref=GenBank:WP_034195138.1;Name=WP_034195138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752344.1;locus_tag=LDO38_RS27710;product=FdhF/YdeP family oxidoreductase;protein_id=WP_034195138.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 55878 56798 . + . ID=gene-LDO38_RS27715;Name=LDO38_RS27715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27715;old_locus_tag=BVI2075_860053 NZ_CAJZAL010000192.1 Protein Homology CDS 55878 56798 . + 0 ID=cds-WP_069246471.1;Parent=gene-LDO38_RS27715;Dbxref=GenBank:WP_069246471.1;Name=WP_069246471.1;Ontology_term=GO:0005254;gbkey=CDS;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524063.1;locus_tag=LDO38_RS27715;product=bestrophin family protein;protein_id=WP_069246471.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 56996 57328 . + . ID=gene-LDO38_RS27720;Name=LDO38_RS27720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27720;old_locus_tag=BVI2075_860054 NZ_CAJZAL010000192.1 Protein Homology CDS 56996 57328 . + 0 ID=cds-WP_011882382.1;Parent=gene-LDO38_RS27720;Dbxref=GenBank:WP_011882382.1;Name=WP_011882382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396861.1;locus_tag=LDO38_RS27720;product=hypothetical protein;protein_id=WP_011882382.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 57432 59021 . + . ID=gene-LDO38_RS27725;Name=LDO38_RS27725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27725;old_locus_tag=BVI2075_860055 NZ_CAJZAL010000192.1 Protein Homology CDS 57432 59021 . + 0 ID=cds-WP_059560571.1;Parent=gene-LDO38_RS27725;Dbxref=GenBank:WP_059560571.1;Name=WP_059560571.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216866.1;locus_tag=LDO38_RS27725;product=ABC transporter substrate-binding protein;protein_id=WP_059560571.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 59268 60575 . - . ID=gene-LDO38_RS27730;Name=LDO38_RS27730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27730;old_locus_tag=BVI2075_860056 NZ_CAJZAL010000192.1 Protein Homology CDS 59268 60575 . - 0 ID=cds-WP_069246470.1;Parent=gene-LDO38_RS27730;Dbxref=GenBank:WP_069246470.1;Name=WP_069246470.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547530.1;locus_tag=LDO38_RS27730;product=Nramp family divalent metal transporter;protein_id=WP_069246470.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 60670 61926 . - . ID=gene-LDO38_RS27735;Name=LDO38_RS27735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27735;old_locus_tag=BVI2075_860057 NZ_CAJZAL010000192.1 Protein Homology CDS 60670 61926 . - 0 ID=cds-WP_059474850.1;Parent=gene-LDO38_RS27735;Dbxref=GenBank:WP_059474850.1;Name=WP_059474850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366239.1;locus_tag=LDO38_RS27735;product=oxalate decarboxylase family bicupin;protein_id=WP_059474850.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 62241 63575 . - . ID=gene-LDO38_RS27740;Name=LDO38_RS27740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27740;old_locus_tag=BVI2075_860058 NZ_CAJZAL010000192.1 Protein Homology CDS 62241 63575 . - 0 ID=cds-WP_059568403.1;Parent=gene-LDO38_RS27740;Dbxref=GenBank:WP_059568403.1;Name=WP_059568403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496989.1;locus_tag=LDO38_RS27740;product=type II toxin-antitoxin system HipA family toxin;protein_id=WP_059568403.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 63579 63827 . - . ID=gene-LDO38_RS27745;Name=LDO38_RS27745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27745;old_locus_tag=BVI2075_860059 NZ_CAJZAL010000192.1 Protein Homology CDS 63579 63827 . - 0 ID=cds-WP_059453648.1;Parent=gene-LDO38_RS27745;Dbxref=GenBank:WP_059453648.1;Name=WP_059453648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483523.1;locus_tag=LDO38_RS27745;product=helix-turn-helix domain-containing protein;protein_id=WP_059453648.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 64083 64976 . + . ID=gene-LDO38_RS27750;Name=sapR;gbkey=Gene;gene=sapR;gene_biotype=protein_coding;locus_tag=LDO38_RS27750;old_locus_tag=BVI2075_860060 NZ_CAJZAL010000192.1 Protein Homology CDS 64083 64976 . + 0 ID=cds-WP_069240285.1;Parent=gene-LDO38_RS27750;Dbxref=GenBank:WP_069240285.1;Name=WP_069240285.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=sapR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216865.1;locus_tag=LDO38_RS27750;product=sap1 transcriptional regulator SapR;protein_id=WP_069240285.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 64993 65556 . + . ID=gene-LDO38_RS27755;Name=ddpX;gbkey=Gene;gene=ddpX;gene_biotype=protein_coding;locus_tag=LDO38_RS27755;old_locus_tag=BVI2075_860061 NZ_CAJZAL010000192.1 Protein Homology CDS 64993 65556 . + 0 ID=cds-WP_014724757.1;Parent=gene-LDO38_RS27755;Dbxref=GenBank:WP_014724757.1;Name=WP_014724757.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;gene=ddpX;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366241.1;locus_tag=LDO38_RS27755;product=D-alanyl-D-alanine dipeptidase;protein_id=WP_014724757.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 65630 67231 . + . ID=gene-LDO38_RS27760;Name=LDO38_RS27760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27760;old_locus_tag=BVI2075_860062 NZ_CAJZAL010000192.1 Protein Homology CDS 65630 67231 . + 0 ID=cds-WP_059568404.1;Parent=gene-LDO38_RS27760;Dbxref=GenBank:WP_059568404.1;Name=WP_059568404.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766074.1;locus_tag=LDO38_RS27760;product=ABC transporter substrate-binding protein;protein_id=WP_059568404.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 67242 68312 . + . ID=gene-LDO38_RS27765;Name=LDO38_RS27765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27765;old_locus_tag=BVI2075_860063 NZ_CAJZAL010000192.1 Protein Homology CDS 67242 68312 . + 0 ID=cds-WP_069246469.1;Parent=gene-LDO38_RS27765;Dbxref=GenBank:WP_069246469.1;Name=WP_069246469.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882391.1;locus_tag=LDO38_RS27765;product=ABC transporter permease;protein_id=WP_069246469.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 68379 69293 . + . ID=gene-LDO38_RS27770;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=LDO38_RS27770;old_locus_tag=BVI2075_860064 NZ_CAJZAL010000192.1 Protein Homology CDS 68379 69293 . + 0 ID=cds-WP_011882392.1;Parent=gene-LDO38_RS27770;Dbxref=GenBank:WP_011882392.1;Name=WP_011882392.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikC;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899028.1;locus_tag=LDO38_RS27770;product=nickel transporter permease;protein_id=WP_011882392.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 69295 70209 . + . ID=gene-LDO38_RS27775;Name=LDO38_RS27775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27775;old_locus_tag=BVI2075_860065 NZ_CAJZAL010000192.1 Protein Homology CDS 69295 70209 . + 0 ID=cds-WP_014724755.1;Parent=gene-LDO38_RS27775;Dbxref=GenBank:WP_014724755.1;Name=WP_014724755.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756294.1;locus_tag=LDO38_RS27775;product=ABC transporter ATP-binding protein;protein_id=WP_014724755.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 70206 70967 . + . ID=gene-LDO38_RS27780;Name=LDO38_RS27780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27780;old_locus_tag=BVI2075_860066 NZ_CAJZAL010000192.1 Protein Homology CDS 70206 70967 . + 0 ID=cds-WP_014724754.1;Parent=gene-LDO38_RS27780;Dbxref=GenBank:WP_014724754.1;Name=WP_014724754.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882394.1;locus_tag=LDO38_RS27780;product=ABC transporter ATP-binding protein;protein_id=WP_014724754.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 71105 71359 . + . ID=gene-LDO38_RS27785;Name=LDO38_RS27785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27785;old_locus_tag=BVI2075_860067 NZ_CAJZAL010000192.1 Protein Homology CDS 71105 71359 . + 0 ID=cds-WP_011882395.1;Parent=gene-LDO38_RS27785;Dbxref=GenBank:WP_011882395.1;Name=WP_011882395.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659025.1;locus_tag=LDO38_RS27785;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_011882395.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 71507 72403 . - . ID=gene-LDO38_RS27790;Name=LDO38_RS27790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27790;old_locus_tag=BVI2075_860068 NZ_CAJZAL010000192.1 Protein Homology CDS 71507 72403 . - 0 ID=cds-WP_011882396.1;Parent=gene-LDO38_RS27790;Dbxref=GenBank:WP_011882396.1;Name=WP_011882396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882396.1;locus_tag=LDO38_RS27790;product=LysR family transcriptional regulator;protein_id=WP_011882396.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 72521 73456 . + . ID=gene-LDO38_RS27795;Name=LDO38_RS27795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27795;old_locus_tag=BVI2075_860069 NZ_CAJZAL010000192.1 Protein Homology CDS 72521 73456 . + 0 ID=cds-WP_034195147.1;Parent=gene-LDO38_RS27795;Dbxref=GenBank:WP_034195147.1;Name=WP_034195147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882397.1;locus_tag=LDO38_RS27795;product=NmrA family NAD(P)-binding protein;protein_id=WP_034195147.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 73793 74101 . + . ID=gene-LDO38_RS27800;Name=LDO38_RS27800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27800;old_locus_tag=BVI2075_860070 NZ_CAJZAL010000192.1 Protein Homology CDS 73793 74101 . + 0 ID=cds-WP_011882398.1;Parent=gene-LDO38_RS27800;Dbxref=GenBank:WP_011882398.1;Name=WP_011882398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882398.1;locus_tag=LDO38_RS27800;product=hypothetical protein;protein_id=WP_011882398.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 74462 74797 . + . ID=gene-LDO38_RS27805;Name=LDO38_RS27805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27805;old_locus_tag=BVI2075_860071 NZ_CAJZAL010000192.1 Protein Homology CDS 74462 74797 . + 0 ID=cds-WP_059568406.1;Parent=gene-LDO38_RS27805;Dbxref=GenBank:WP_059568406.1;Name=WP_059568406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478830.1;locus_tag=LDO38_RS27805;product=hypothetical protein;protein_id=WP_059568406.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 74823 75418 . - . ID=gene-LDO38_RS27810;Name=LDO38_RS27810;end_range=75418,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27810;old_locus_tag=BVI2075_860072;partial=true NZ_CAJZAL010000192.1 Protein Homology CDS 74823 75418 . - 2 ID=cds-WP_435520996.1;Parent=gene-LDO38_RS27810;Dbxref=GenBank:WP_435520996.1;Name=WP_435520996.1;end_range=75418,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202658.1;locus_tag=LDO38_RS27810;partial=true;product=LysR substrate-binding domain-containing protein;protein_id=WP_435520996.1;transl_table=11 NZ_CAJZAL010000192.1 RefSeq gene 75429 75560 . - . ID=gene-LDO38_RS30695;Name=LDO38_RS30695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30695;old_locus_tag=BVI2075_860073;partial=true;start_range=.,75429 NZ_CAJZAL010000192.1 Protein Homology CDS 75429 75560 . - 0 ID=cds-WP_435520997.1;Parent=gene-LDO38_RS30695;Dbxref=GenBank:WP_435520997.1;Name=WP_435520997.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202658.1;locus_tag=LDO38_RS30695;partial=true;product=LysR family transcriptional regulator;protein_id=WP_435520997.1;start_range=.,75429;transl_table=11 ##sequence-region NZ_CAJZAL010000193.1 1 6776 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000193.1 RefSeq region 1 6776 . + . ID=NZ_CAJZAL010000193.1:1..6776;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_87 NZ_CAJZAL010000193.1 RefSeq gene 167 2041 . - . ID=gene-LDO38_RS27815;Name=LDO38_RS27815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27815;old_locus_tag=BVI2075_870001;partial=true;start_range=.,167 NZ_CAJZAL010000193.1 Protein Homology CDS 167 2041 . - 0 ID=cds-WP_435520998.1;Parent=gene-LDO38_RS27815;Dbxref=GenBank:WP_435520998.1;Name=WP_435520998.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329300.1;locus_tag=LDO38_RS27815;partial=true;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_435520998.1;start_range=.,167;transl_table=11 NZ_CAJZAL010000193.1 RefSeq gene 2325 3449 . + . ID=gene-LDO38_RS27820;Name=LDO38_RS27820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27820;old_locus_tag=BVI2075_870003 NZ_CAJZAL010000193.1 Protein Homology CDS 2325 3449 . + 0 ID=cds-WP_011886150.1;Parent=gene-LDO38_RS27820;Dbxref=GenBank:WP_011886150.1;Name=WP_011886150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329299.1;locus_tag=LDO38_RS27820;product=MlaE family lipid ABC transporter permease subunit;protein_id=WP_011886150.1;transl_table=11 NZ_CAJZAL010000193.1 RefSeq gene 3446 4354 . + . ID=gene-LDO38_RS27825;Name=LDO38_RS27825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27825;old_locus_tag=BVI2075_870002 NZ_CAJZAL010000193.1 Protein Homology CDS 3446 4354 . + 0 ID=cds-WP_014723727.1;Parent=gene-LDO38_RS27825;Dbxref=GenBank:WP_014723727.1;Name=WP_014723727.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723727.1;locus_tag=LDO38_RS27825;product=ABC transporter ATP-binding protein;protein_id=WP_014723727.1;transl_table=11 NZ_CAJZAL010000193.1 RefSeq gene 4383 5312 . + . ID=gene-LDO38_RS27830;Name=LDO38_RS27830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27830;old_locus_tag=BVI2075_870004 NZ_CAJZAL010000193.1 Protein Homology CDS 4383 5312 . + 0 ID=cds-WP_175898328.1;Parent=gene-LDO38_RS27830;Dbxref=GenBank:WP_175898328.1;Name=WP_175898328.1;Ontology_term=GO:0015914;gbkey=CDS;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763282.1;locus_tag=LDO38_RS27830;product=MlaD family protein;protein_id=WP_175898328.1;transl_table=11 NZ_CAJZAL010000193.1 RefSeq gene 5434 6057 . + . ID=gene-LDO38_RS27835;Name=LDO38_RS27835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27835;old_locus_tag=BVI2075_870005 NZ_CAJZAL010000193.1 Protein Homology CDS 5434 6057 . + 0 ID=cds-WP_011886147.1;Parent=gene-LDO38_RS27835;Dbxref=GenBank:WP_011886147.1;Name=WP_011886147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886147.1;locus_tag=LDO38_RS27835;product=ABC-type transport auxiliary lipoprotein family protein;protein_id=WP_011886147.1;transl_table=11 NZ_CAJZAL010000193.1 RefSeq gene 6077 6776 . + . ID=gene-LDO38_RS27840;Name=LDO38_RS27840;end_range=6776,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27840;partial=true NZ_CAJZAL010000193.1 Protein Homology CDS 6077 6776 . + 0 ID=cds-WP_224056732.1;Parent=gene-LDO38_RS27840;Dbxref=GenBank:WP_224056732.1;Name=WP_224056732.1;Ontology_term=GO:0046677,GO:0071555,GO:0005576;end_range=6776,.;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_process=response to antibiotic|0046677||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364798.1;locus_tag=LDO38_RS27840;partial=true;product=VanZ family protein;protein_id=WP_224056732.1;transl_table=11 ##sequence-region NZ_CAJZAL010000194.1 1 40408 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000194.1 RefSeq region 1 40408 . + . ID=NZ_CAJZAL010000194.1:1..40408;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_88 NZ_CAJZAL010000194.1 RefSeq gene 1 2127 . + . ID=gene-LDO38_RS27845;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=LDO38_RS27845;old_locus_tag=BVI2075_880001;partial=true;start_range=.,1 NZ_CAJZAL010000194.1 Protein Homology CDS 1 2127 . + 0 ID=cds-WP_224056733.1;Parent=gene-LDO38_RS27845;Dbxref=GenBank:WP_224056733.1;Name=WP_224056733.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678;gbkey=CDS;gene=recG;go_function=DNA helicase activity|0003678||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883321.1;locus_tag=LDO38_RS27845;partial=true;product=ATP-dependent DNA helicase RecG;protein_id=WP_224056733.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 2265 3224 . + . ID=gene-LDO38_RS27850;Name=LDO38_RS27850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27850;old_locus_tag=BVI2075_880002 NZ_CAJZAL010000194.1 Protein Homology CDS 2265 3224 . + 0 ID=cds-WP_011883322.1;Parent=gene-LDO38_RS27850;Dbxref=GenBank:WP_011883322.1;Name=WP_011883322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333233.1;locus_tag=LDO38_RS27850;product=LysR substrate-binding domain-containing protein;protein_id=WP_011883322.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 3717 5903 . + . ID=gene-LDO38_RS27855;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=LDO38_RS27855;old_locus_tag=BVI2075_880004 NZ_CAJZAL010000194.1 Protein Homology CDS 3717 5903 . + 0 ID=cds-WP_011883323.1;Parent=gene-LDO38_RS27855;Dbxref=GenBank:WP_011883323.1;Name=WP_011883323.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327929.1;locus_tag=LDO38_RS27855;product=catalase/peroxidase HPI;protein_id=WP_011883323.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 6012 6161 . + . ID=gene-LDO38_RS27860;Name=LDO38_RS27860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27860;old_locus_tag=BVI2075_880005 NZ_CAJZAL010000194.1 Protein Homology CDS 6012 6161 . + 0 ID=cds-WP_011883324.1;Parent=gene-LDO38_RS27860;Dbxref=GenBank:WP_011883324.1;Name=WP_011883324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883324.1;locus_tag=LDO38_RS27860;product=hypothetical protein;protein_id=WP_011883324.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 6285 6773 . + . ID=gene-LDO38_RS27865;Name=dpsA;gbkey=Gene;gene=dpsA;gene_biotype=protein_coding;locus_tag=LDO38_RS27865;old_locus_tag=BVI2075_880006 NZ_CAJZAL010000194.1 Protein Homology CDS 6285 6773 . + 0 ID=cds-WP_011883325.1;Parent=gene-LDO38_RS27865;Dbxref=GenBank:WP_011883325.1;Name=WP_011883325.1;gbkey=CDS;gene=dpsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200519.1;locus_tag=LDO38_RS27865;product=non-specific DNA-binding protein DpsA;protein_id=WP_011883325.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 7163 8035 . + . ID=gene-LDO38_RS27870;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=LDO38_RS27870;old_locus_tag=BVI2075_880007 NZ_CAJZAL010000194.1 Protein Homology CDS 7163 8035 . + 0 ID=cds-WP_059474730.1;Parent=gene-LDO38_RS27870;Dbxref=GenBank:WP_059474730.1;Name=WP_059474730.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656015.1;locus_tag=LDO38_RS27870;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_059474730.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 8159 8971 . - . ID=gene-LDO38_RS27875;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=LDO38_RS27875;old_locus_tag=BVI2075_880008 NZ_CAJZAL010000194.1 Protein Homology CDS 8159 8971 . - 0 ID=cds-WP_014722473.1;Parent=gene-LDO38_RS27875;Dbxref=GenBank:WP_014722473.1;Name=WP_014722473.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004550016.1;locus_tag=LDO38_RS27875;product=pyrroline-5-carboxylate reductase;protein_id=WP_014722473.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 9017 9715 . - . ID=gene-LDO38_RS27880;Name=LDO38_RS27880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27880;old_locus_tag=BVI2075_880009 NZ_CAJZAL010000194.1 Protein Homology CDS 9017 9715 . - 0 ID=cds-WP_011883328.1;Parent=gene-LDO38_RS27880;Dbxref=GenBank:WP_011883328.1;Name=WP_011883328.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363137.1;locus_tag=LDO38_RS27880;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_011883328.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 9858 11084 . - . ID=gene-LDO38_RS27885;Name=glcF;gbkey=Gene;gene=glcF;gene_biotype=protein_coding;locus_tag=LDO38_RS27885;old_locus_tag=BVI2075_880010 NZ_CAJZAL010000194.1 Protein Homology CDS 9858 11084 . - 0 ID=cds-WP_034194445.1;Parent=gene-LDO38_RS27885;Dbxref=GenBank:WP_034194445.1;Name=WP_034194445.1;Ontology_term=GO:0051536;gbkey=CDS;gene=glcF;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194146.1;locus_tag=LDO38_RS27885;product=glycolate oxidase subunit GlcF;protein_id=WP_034194445.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 11086 12174 . - . ID=gene-LDO38_RS27890;Name=glcE;gbkey=Gene;gene=glcE;gene_biotype=protein_coding;locus_tag=LDO38_RS27890;old_locus_tag=BVI2075_880011 NZ_CAJZAL010000194.1 Protein Homology CDS 11086 12174 . - 0 ID=cds-WP_059736013.1;Parent=gene-LDO38_RS27890;Dbxref=GenBank:WP_059736013.1;Name=WP_059736013.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=glcE;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333241.1;locus_tag=LDO38_RS27890;product=glycolate oxidase subunit GlcE;protein_id=WP_059736013.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 12293 13786 . - . ID=gene-LDO38_RS27895;Name=LDO38_RS27895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27895;old_locus_tag=BVI2075_880012 NZ_CAJZAL010000194.1 Protein Homology CDS 12293 13786 . - 0 ID=cds-WP_011883331.1;Parent=gene-LDO38_RS27895;Dbxref=GenBank:WP_011883331.1;Name=WP_011883331.1;Ontology_term=GO:0003824,GO:0050660;gbkey=CDS;go_function=catalytic activity|0003824||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009913510.1;locus_tag=LDO38_RS27895;product=FAD-linked oxidase C-terminal domain-containing protein;protein_id=WP_011883331.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 13824 15233 . - . ID=gene-LDO38_RS27900;Name=LDO38_RS27900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27900;old_locus_tag=BVI2075_880014 NZ_CAJZAL010000194.1 Protein Homology CDS 13824 15233 . - 0 ID=cds-WP_034194446.1;Parent=gene-LDO38_RS27900;Dbxref=GenBank:WP_034194446.1;Name=WP_034194446.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656021.1;locus_tag=LDO38_RS27900;product=FAD-binding oxidoreductase;protein_id=WP_034194446.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 15374 15925 . + . ID=gene-LDO38_RS27905;Name=LDO38_RS27905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27905;old_locus_tag=BVI2075_880015 NZ_CAJZAL010000194.1 Protein Homology CDS 15374 15925 . + 0 ID=cds-WP_011883333.1;Parent=gene-LDO38_RS27905;Dbxref=GenBank:WP_011883333.1;Name=WP_011883333.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544630.1;locus_tag=LDO38_RS27905;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_011883333.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 16015 17223 . + . ID=gene-LDO38_RS27910;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=LDO38_RS27910;old_locus_tag=BVI2075_880016 NZ_CAJZAL010000194.1 Protein Homology CDS 16015 17223 . + 0 ID=cds-WP_011883334.1;Parent=gene-LDO38_RS27910;Dbxref=GenBank:WP_011883334.1;Name=WP_011883334.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106227.1;locus_tag=LDO38_RS27910;product=NO-inducible flavohemoprotein;protein_id=WP_011883334.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 17354 18427 . - . ID=gene-LDO38_RS27915;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=LDO38_RS27915;old_locus_tag=BVI2075_880017 NZ_CAJZAL010000194.1 Protein Homology CDS 17354 18427 . - 0 ID=cds-WP_011883337.1;Parent=gene-LDO38_RS27915;Dbxref=GenBank:WP_011883337.1;Name=WP_011883337.1;Ontology_term=GO:0009073,GO:0003849;gbkey=CDS;gene=aroG;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013587169.1;locus_tag=LDO38_RS27915;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_011883337.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 18823 20289 . - . ID=gene-LDO38_RS27920;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=LDO38_RS27920;old_locus_tag=BVI2075_880018 NZ_CAJZAL010000194.1 Protein Homology CDS 18823 20289 . - 0 ID=cds-WP_011883338.1;Parent=gene-LDO38_RS27920;Dbxref=GenBank:WP_011883338.1;Name=WP_011883338.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012431786.1;locus_tag=LDO38_RS27920;product=metalloprotease TldD;protein_id=WP_011883338.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 20376 21203 . - . ID=gene-LDO38_RS27925;Name=LDO38_RS27925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27925;old_locus_tag=BVI2075_880019 NZ_CAJZAL010000194.1 Protein Homology CDS 20376 21203 . - 0 ID=cds-WP_212196960.1;Parent=gene-LDO38_RS27925;Dbxref=GenBank:WP_212196960.1;Name=WP_212196960.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883340.1;locus_tag=LDO38_RS27925;product=carbon-nitrogen hydrolase family protein;protein_id=WP_212196960.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 21255 25454 . - . ID=gene-LDO38_RS27930;Name=LDO38_RS27930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27930;old_locus_tag=BVI2075_880020 NZ_CAJZAL010000194.1 Protein Homology CDS 21255 25454 . - 0 ID=cds-WP_224056734.1;Parent=gene-LDO38_RS27930;Dbxref=GenBank:WP_224056734.1;Name=WP_224056734.1;Ontology_term=GO:0015914,GO:0055085,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=phospholipid transport|0015914||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752728.1;locus_tag=LDO38_RS27930;product=YhdP family phospholipid transporter;protein_id=WP_224056734.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 25689 28490 . + . ID=gene-LDO38_RS27935;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=LDO38_RS27935;old_locus_tag=BVI2075_880022 NZ_CAJZAL010000194.1 Protein Homology CDS 25689 28490 . + 0 ID=cds-WP_224056735.1;Parent=gene-LDO38_RS27935;Dbxref=GenBank:WP_224056735.1;Name=WP_224056735.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497495.1;locus_tag=LDO38_RS27935;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_224056735.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 28941 30590 . - . ID=gene-LDO38_RS27940;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=LDO38_RS27940;old_locus_tag=BVI2075_880024 NZ_CAJZAL010000194.1 Protein Homology CDS 28941 30590 . - 0 ID=cds-WP_014722483.1;Parent=gene-LDO38_RS27940;Dbxref=GenBank:WP_014722483.1;Name=WP_014722483.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889240.1;locus_tag=LDO38_RS27940;product=DNA repair protein RecN;protein_id=WP_014722483.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 30610 31512 . - . ID=gene-LDO38_RS27945;Name=LDO38_RS27945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27945;old_locus_tag=BVI2075_880025 NZ_CAJZAL010000194.1 Protein Homology CDS 30610 31512 . - 0 ID=cds-WP_011883345.1;Parent=gene-LDO38_RS27945;Dbxref=GenBank:WP_011883345.1;Name=WP_011883345.1;Ontology_term=GO:0019674,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NAD+ metabolic process|0019674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883345.1;locus_tag=LDO38_RS27945;product=NAD kinase;protein_id=WP_011883345.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 31643 32665 . + . ID=gene-LDO38_RS27950;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=LDO38_RS27950;old_locus_tag=BVI2075_880026 NZ_CAJZAL010000194.1 Protein Homology CDS 31643 32665 . + 0 ID=cds-WP_011883347.1;Parent=gene-LDO38_RS27950;Dbxref=GenBank:WP_011883347.1;Name=WP_011883347.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=hrcA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752732.1;locus_tag=LDO38_RS27950;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_011883347.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 32825 33889 . + . ID=gene-LDO38_RS27955;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=LDO38_RS27955;old_locus_tag=BVI2075_880027 NZ_CAJZAL010000194.1 Protein Homology CDS 32825 33889 . + 0 ID=cds-WP_011883349.1;Parent=gene-LDO38_RS27955;Dbxref=GenBank:WP_011883349.1;Name=WP_011883349.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694160.1;locus_tag=LDO38_RS27955;product=ferrochelatase;protein_id=WP_011883349.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 33895 34302 . + . ID=gene-LDO38_RS27960;Name=LDO38_RS27960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27960;old_locus_tag=BVI2075_880028 NZ_CAJZAL010000194.1 Protein Homology CDS 33895 34302 . + 0 ID=cds-WP_034194465.1;Parent=gene-LDO38_RS27960;Dbxref=GenBank:WP_034194465.1;Name=WP_034194465.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401607.1;locus_tag=LDO38_RS27960;product=RNA-binding S4 domain-containing protein;protein_id=WP_034194465.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 34274 34435 . - . ID=gene-LDO38_RS27965;Name=LDO38_RS27965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27965;old_locus_tag=BVI2075_880029 NZ_CAJZAL010000194.1 Protein Homology CDS 34274 34435 . - 0 ID=cds-WP_011883353.1;Parent=gene-LDO38_RS27965;Dbxref=GenBank:WP_011883353.1;Name=WP_011883353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194079.1;locus_tag=LDO38_RS27965;product=hypothetical protein;protein_id=WP_011883353.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 34763 35308 . + . ID=gene-LDO38_RS27970;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=LDO38_RS27970;old_locus_tag=BVI2075_880030 NZ_CAJZAL010000194.1 Protein Homology CDS 34763 35308 . + 0 ID=cds-WP_011883354.1;Parent=gene-LDO38_RS27970;Dbxref=GenBank:WP_011883354.1;Name=WP_011883354.1;Ontology_term=GO:0006457,GO:0000774,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein-folding chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194243.1;locus_tag=LDO38_RS27970;product=nucleotide exchange factor GrpE;protein_id=WP_011883354.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 35319 35750 . + . ID=gene-LDO38_RS27975;Name=LDO38_RS27975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27975;old_locus_tag=BVI2075_880031 NZ_CAJZAL010000194.1 Protein Homology CDS 35319 35750 . + 0 ID=cds-WP_011883355.1;Parent=gene-LDO38_RS27975;Dbxref=GenBank:WP_011883355.1;Name=WP_011883355.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214078.1;locus_tag=LDO38_RS27975;product=thioredoxin family protein;protein_id=WP_011883355.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 35898 37850 . + . ID=gene-LDO38_RS27980;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=LDO38_RS27980;old_locus_tag=BVI2075_880033 NZ_CAJZAL010000194.1 Protein Homology CDS 35898 37850 . + 0 ID=cds-WP_011883357.1;Parent=gene-LDO38_RS27980;Dbxref=GenBank:WP_011883357.1;Name=WP_011883357.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013088502.1;locus_tag=LDO38_RS27980;product=molecular chaperone DnaK;protein_id=WP_011883357.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 38107 39243 . + . ID=gene-LDO38_RS27985;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=LDO38_RS27985;old_locus_tag=BVI2075_880034 NZ_CAJZAL010000194.1 Protein Homology CDS 38107 39243 . + 0 ID=cds-WP_011883359.1;Parent=gene-LDO38_RS27985;Dbxref=GenBank:WP_011883359.1;Name=WP_011883359.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417099.1;locus_tag=LDO38_RS27985;product=molecular chaperone DnaJ;protein_id=WP_011883359.1;transl_table=11 NZ_CAJZAL010000194.1 RefSeq gene 39248 40408 . + . ID=gene-LDO38_RS27990;Name=LDO38_RS27990;end_range=40408,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27990;partial=true NZ_CAJZAL010000194.1 Protein Homology CDS 39248 40408 . + 0 ID=cds-WP_224056736.1;Parent=gene-LDO38_RS27990;Dbxref=GenBank:WP_224056736.1;Name=WP_224056736.1;end_range=40408,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722487.1;locus_tag=LDO38_RS27990;partial=true;product=anthranilate synthase component I family protein;protein_id=WP_224056736.1;transl_table=11 ##sequence-region NZ_CAJZAL010000195.1 1 17201 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000195.1 RefSeq region 1 17201 . + . ID=NZ_CAJZAL010000195.1:1..17201;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_89 NZ_CAJZAL010000195.1 RefSeq pseudogene 1 229 . + . ID=gene-LDO38_RS30700;Name=LDO38_RS30700;end_range=229,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30700;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000195.1 Protein Homology CDS 1 229 . + 1 ID=cds-LDO38_RS30700;Parent=gene-LDO38_RS30700;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=229,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498597.1;locus_tag=LDO38_RS30700;partial=true;product=cytochrome c biogenesis protein DipZ;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000195.1 RefSeq gene 240 1118 . + . ID=gene-LDO38_RS27995;Name=LDO38_RS27995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS27995;old_locus_tag=BVI2075_890002;partial=true;start_range=.,240 NZ_CAJZAL010000195.1 Protein Homology CDS 240 1118 . + 0 ID=cds-WP_435520999.1;Parent=gene-LDO38_RS27995;Dbxref=GenBank:WP_435520999.1;Name=WP_435520999.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498597.1;locus_tag=LDO38_RS27995;partial=true;product=redoxin domain-containing protein;protein_id=WP_435520999.1;start_range=.,240;transl_table=11 NZ_CAJZAL010000195.1 RefSeq gene 1203 1946 . + . ID=gene-LDO38_RS28000;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=LDO38_RS28000;old_locus_tag=BVI2075_890003 NZ_CAJZAL010000195.1 Protein Homology CDS 1203 1946 . + 0 ID=cds-WP_224056737.1;Parent=gene-LDO38_RS28000;Dbxref=GenBank:WP_224056737.1;Name=WP_224056737.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879673.1;locus_tag=LDO38_RS28000;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_224056737.1;transl_table=11 NZ_CAJZAL010000195.1 RefSeq gene 2139 3260 . + . ID=gene-LDO38_RS28005;Name=LDO38_RS28005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28005;old_locus_tag=BVI2075_890004 NZ_CAJZAL010000195.1 Protein Homology CDS 2139 3260 . + 0 ID=cds-WP_014725531.1;Parent=gene-LDO38_RS28005;Dbxref=GenBank:WP_014725531.1;Name=WP_014725531.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760703.1;locus_tag=LDO38_RS28005;product=aromatic ring-hydroxylating oxygenase subunit alpha;protein_id=WP_014725531.1;transl_table=11 NZ_CAJZAL010000195.1 RefSeq gene 3299 4756 . - . ID=gene-LDO38_RS28010;Name=hydA;gbkey=Gene;gene=hydA;gene_biotype=protein_coding;locus_tag=LDO38_RS28010;old_locus_tag=BVI2075_890005 NZ_CAJZAL010000195.1 Protein Homology CDS 3299 4756 . - 0 ID=cds-WP_034194336.1;Parent=gene-LDO38_RS28010;Dbxref=GenBank:WP_034194336.1;Name=WP_034194336.1;Ontology_term=GO:0008152,GO:0004157,GO:0005737;gbkey=CDS;gene=hydA;go_component=cytoplasm|0005737||IEA;go_function=dihydropyrimidinase activity|0004157||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402886.1;locus_tag=LDO38_RS28010;product=dihydropyrimidinase;protein_id=WP_034194336.1;transl_table=11 NZ_CAJZAL010000195.1 RefSeq gene 4812 6320 . - . ID=gene-LDO38_RS28015;Name=LDO38_RS28015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28015;old_locus_tag=BVI2075_890006 NZ_CAJZAL010000195.1 Protein Homology CDS 4812 6320 . - 0 ID=cds-WP_175900642.1;Parent=gene-LDO38_RS28015;Dbxref=GenBank:WP_175900642.1;Name=WP_175900642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753680.1;locus_tag=LDO38_RS28015;product=NCS1 family nucleobase:cation symporter-1;protein_id=WP_175900642.1;transl_table=11 NZ_CAJZAL010000195.1 RefSeq gene 6418 7725 . - . ID=gene-LDO38_RS28020;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=LDO38_RS28020;old_locus_tag=BVI2075_890008 NZ_CAJZAL010000195.1 Protein Homology CDS 6418 7725 . - 0 ID=cds-WP_060081053.1;Parent=gene-LDO38_RS28020;Dbxref=GenBank:WP_060081053.1;Name=WP_060081053.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335435.1;locus_tag=LDO38_RS28020;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_060081053.1;transl_table=11 NZ_CAJZAL010000195.1 RefSeq gene 7853 9190 . - . ID=gene-LDO38_RS28025;Name=LDO38_RS28025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28025;old_locus_tag=BVI2075_890009 NZ_CAJZAL010000195.1 Protein Homology CDS 7853 9190 . - 0 ID=cds-WP_014725527.1;Parent=gene-LDO38_RS28025;Dbxref=GenBank:WP_014725527.1;Name=WP_014725527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725527.1;locus_tag=LDO38_RS28025;product=NAD(P)-dependent oxidoreductase;protein_id=WP_014725527.1;transl_table=11 NZ_CAJZAL010000195.1 RefSeq gene 9318 10598 . - . ID=gene-LDO38_RS28030;Name=LDO38_RS28030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28030;old_locus_tag=BVI2075_890010 NZ_CAJZAL010000195.1 Protein Homology CDS 9318 10598 . - 0 ID=cds-WP_034194333.1;Parent=gene-LDO38_RS28030;Dbxref=GenBank:WP_034194333.1;Name=WP_034194333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065405.1;locus_tag=LDO38_RS28030;product=Zn-dependent hydrolase;protein_id=WP_034194333.1;transl_table=11 NZ_CAJZAL010000195.1 RefSeq gene 10973 11659 . + . ID=gene-LDO38_RS28035;Name=LDO38_RS28035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28035;old_locus_tag=BVI2075_890011 NZ_CAJZAL010000195.1 Protein Homology CDS 10973 11659 . + 0 ID=cds-WP_059474215.1;Parent=gene-LDO38_RS28035;Dbxref=GenBank:WP_059474215.1;Name=WP_059474215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725524.1;locus_tag=LDO38_RS28035;product=TetR/AcrR family transcriptional regulator;protein_id=WP_059474215.1;transl_table=11 NZ_CAJZAL010000195.1 RefSeq gene 11750 12940 . - . ID=gene-LDO38_RS28040;Name=LDO38_RS28040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28040;old_locus_tag=BVI2075_890012 NZ_CAJZAL010000195.1 Protein Homology CDS 11750 12940 . - 0 ID=cds-WP_014725523.1;Parent=gene-LDO38_RS28040;Dbxref=GenBank:WP_014725523.1;Name=WP_014725523.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660855.1;locus_tag=LDO38_RS28040;product=acetyl-CoA C-acetyltransferase;protein_id=WP_014725523.1;transl_table=11 NZ_CAJZAL010000195.1 RefSeq gene 12964 13731 . - . ID=gene-LDO38_RS28045;Name=LDO38_RS28045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28045;old_locus_tag=BVI2075_890013 NZ_CAJZAL010000195.1 Protein Homology CDS 12964 13731 . - 0 ID=cds-WP_059561900.1;Parent=gene-LDO38_RS28045;Dbxref=GenBank:WP_059561900.1;Name=WP_059561900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483642.1;locus_tag=LDO38_RS28045;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_059561900.1;transl_table=11 NZ_CAJZAL010000195.1 RefSeq gene 13765 15432 . - . ID=gene-LDO38_RS28050;Name=LDO38_RS28050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28050;old_locus_tag=BVI2075_890014 NZ_CAJZAL010000195.1 Protein Homology CDS 13765 15432 . - 0 ID=cds-WP_175984209.1;Parent=gene-LDO38_RS28050;Dbxref=GenBank:WP_175984209.1;Name=WP_175984209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725521.1;locus_tag=LDO38_RS28050;product=acyl-CoA synthetase;protein_id=WP_175984209.1;transl_table=11 NZ_CAJZAL010000195.1 RefSeq gene 15571 16584 . + . ID=gene-LDO38_RS28055;Name=LDO38_RS28055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28055;old_locus_tag=BVI2075_890015 NZ_CAJZAL010000195.1 Protein Homology CDS 15571 16584 . + 0 ID=cds-WP_176322089.1;Parent=gene-LDO38_RS28055;Dbxref=GenBank:WP_176322089.1;Name=WP_176322089.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725520.1;locus_tag=LDO38_RS28055;product=AraC family transcriptional regulator;protein_id=WP_176322089.1;transl_table=11 NZ_CAJZAL010000195.1 RefSeq gene 16952 17201 . + . ID=gene-LDO38_RS28060;Name=LDO38_RS28060;end_range=17201,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28060;partial=true NZ_CAJZAL010000195.1 Protein Homology CDS 16952 17201 . + 0 ID=cds-WP_224056738.1;Parent=gene-LDO38_RS28060;Dbxref=GenBank:WP_224056738.1;Name=WP_224056738.1;end_range=17201,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725519.1;locus_tag=LDO38_RS28060;partial=true;product=DUF4440 domain-containing protein;protein_id=WP_224056738.1;transl_table=11 ##sequence-region NZ_CAJZAL010000196.1 1 50954 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000196.1 RefSeq region 1 50954 . + . ID=NZ_CAJZAL010000196.1:1..50954;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_9 NZ_CAJZAL010000196.1 RefSeq gene 148 405 . + . ID=gene-LDO38_RS28070;Name=LDO38_RS28070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28070;old_locus_tag=BVI2075_90001 NZ_CAJZAL010000196.1 Protein Homology CDS 148 405 . + 0 ID=cds-WP_011880075.1;Parent=gene-LDO38_RS28070;Dbxref=GenBank:WP_011880075.1;Name=WP_011880075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880075.1;locus_tag=LDO38_RS28070;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WP_011880075.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 402 1538 . + . ID=gene-LDO38_RS28075;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=LDO38_RS28075;old_locus_tag=BVI2075_90002 NZ_CAJZAL010000196.1 Protein Homology CDS 402 1538 . + 0 ID=cds-WP_011880076.1;Parent=gene-LDO38_RS28075;Dbxref=GenBank:WP_011880076.1;Name=WP_011880076.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880076.1;locus_tag=LDO38_RS28075;product=hydrogenase formation protein HypD;protein_id=WP_011880076.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 1535 2611 . + . ID=gene-LDO38_RS28080;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=LDO38_RS28080;old_locus_tag=BVI2075_90003 NZ_CAJZAL010000196.1 Protein Homology CDS 1535 2611 . + 0 ID=cds-WP_059457504.1;Parent=gene-LDO38_RS28080;Dbxref=GenBank:WP_059457504.1;Name=WP_059457504.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880077.1;locus_tag=LDO38_RS28080;product=hydrogenase expression/formation protein HypE;protein_id=WP_059457504.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 2732 4234 . + . ID=gene-LDO38_RS28085;Name=LDO38_RS28085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28085;old_locus_tag=BVI2075_90005 NZ_CAJZAL010000196.1 Protein Homology CDS 2732 4234 . + 0 ID=cds-WP_224056739.1;Parent=gene-LDO38_RS28085;Dbxref=GenBank:WP_224056739.1;Name=WP_224056739.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677,GO:0005524;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880078.1;locus_tag=LDO38_RS28085;product=sigma-54-dependent transcriptional regulator;protein_id=WP_224056739.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 4231 5268 . + . ID=gene-LDO38_RS28090;Name=LDO38_RS28090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28090;old_locus_tag=BVI2075_90004 NZ_CAJZAL010000196.1 Protein Homology CDS 4231 5268 . + 0 ID=cds-WP_212173400.1;Parent=gene-LDO38_RS28090;Dbxref=GenBank:WP_212173400.1;Name=WP_212173400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725821.1;locus_tag=LDO38_RS28090;product=HupU protein;protein_id=WP_212173400.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 5277 6734 . + . ID=gene-LDO38_RS28095;Name=LDO38_RS28095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28095;old_locus_tag=BVI2075_90006 NZ_CAJZAL010000196.1 Protein Homology CDS 5277 6734 . + 0 ID=cds-WP_176000076.1;Parent=gene-LDO38_RS28095;Dbxref=GenBank:WP_176000076.1;Name=WP_176000076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880080.1;locus_tag=LDO38_RS28095;product=nickel-dependent hydrogenase large subunit;protein_id=WP_176000076.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 6789 8192 . + . ID=gene-LDO38_RS28100;Name=LDO38_RS28100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28100;old_locus_tag=BVI2075_90007 NZ_CAJZAL010000196.1 Protein Homology CDS 6789 8192 . + 0 ID=cds-WP_081054377.1;Parent=gene-LDO38_RS28100;Dbxref=GenBank:WP_081054377.1;Name=WP_081054377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880081.1;locus_tag=LDO38_RS28100;product=PAS domain-containing sensor histidine kinase;protein_id=WP_081054377.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 9003 9719 . + . ID=gene-LDO38_RS28105;Name=LDO38_RS28105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28105;old_locus_tag=BVI2075_90009 NZ_CAJZAL010000196.1 Protein Homology CDS 9003 9719 . + 0 ID=cds-WP_224056740.1;Parent=gene-LDO38_RS28105;Dbxref=GenBank:WP_224056740.1;Name=WP_224056740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402452.1;locus_tag=LDO38_RS28105;product=beta-ketoacyl synthase chain length factor;protein_id=WP_224056740.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 9703 10497 . + . ID=gene-LDO38_RS28110;Name=LDO38_RS28110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28110;old_locus_tag=BVI2075_90010 NZ_CAJZAL010000196.1 Protein Homology CDS 9703 10497 . + 0 ID=cds-WP_011880085.1;Parent=gene-LDO38_RS28110;Dbxref=GenBank:WP_011880085.1;Name=WP_011880085.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758586.1;locus_tag=LDO38_RS28110;product=lysophospholipid acyltransferase family protein;protein_id=WP_011880085.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 10472 10777 . + . ID=gene-LDO38_RS28115;Name=LDO38_RS28115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28115;old_locus_tag=BVI2075_90011 NZ_CAJZAL010000196.1 Protein Homology CDS 10472 10777 . + 0 ID=cds-WP_011880086.1;Parent=gene-LDO38_RS28115;Dbxref=GenBank:WP_011880086.1;Name=WP_011880086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402450.1;locus_tag=LDO38_RS28115;product=phosphopantetheine-binding protein;protein_id=WP_011880086.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 10774 11022 . + . ID=gene-LDO38_RS28120;Name=LDO38_RS28120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28120;old_locus_tag=BVI2075_90012 NZ_CAJZAL010000196.1 Protein Homology CDS 10774 11022 . + 0 ID=cds-WP_011880087.1;Parent=gene-LDO38_RS28120;Dbxref=GenBank:WP_011880087.1;Name=WP_011880087.1;Ontology_term=GO:0006633;gbkey=CDS;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658620.1;locus_tag=LDO38_RS28120;product=acyl carrier protein;protein_id=WP_011880087.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 11025 11660 . + . ID=gene-LDO38_RS28125;Name=LDO38_RS28125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28125;old_locus_tag=BVI2075_90013 NZ_CAJZAL010000196.1 Protein Homology CDS 11025 11660 . + 0 ID=cds-WP_034192765.1;Parent=gene-LDO38_RS28125;Dbxref=GenBank:WP_034192765.1;Name=WP_034192765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403745.1;locus_tag=LDO38_RS28125;product=membrane protein;protein_id=WP_034192765.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 11657 13348 . + . ID=gene-LDO38_RS28130;Name=LDO38_RS28130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28130;old_locus_tag=BVI2075_90014 NZ_CAJZAL010000196.1 Protein Homology CDS 11657 13348 . + 0 ID=cds-WP_212173396.1;Parent=gene-LDO38_RS28130;Dbxref=GenBank:WP_212173396.1;Name=WP_212173396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880089.1;locus_tag=LDO38_RS28130;product=acyl-CoA synthetase family protein;protein_id=WP_212173396.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 13345 15051 . + . ID=gene-LDO38_RS28135;Name=LDO38_RS28135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28135;old_locus_tag=BVI2075_90015 NZ_CAJZAL010000196.1 Protein Homology CDS 13345 15051 . + 0 ID=cds-WP_059603514.1;Parent=gene-LDO38_RS28135;Dbxref=GenBank:WP_059603514.1;Name=WP_059603514.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758591.1;locus_tag=LDO38_RS28135;product=glycosyltransferase family 2 protein;protein_id=WP_059603514.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 15038 16648 . + . ID=gene-LDO38_RS28140;Name=LDO38_RS28140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28140;old_locus_tag=BVI2075_90016 NZ_CAJZAL010000196.1 Protein Homology CDS 15038 16648 . + 0 ID=cds-WP_176321637.1;Parent=gene-LDO38_RS28140;Dbxref=GenBank:WP_176321637.1;Name=WP_176321637.1;Ontology_term=GO:0170035,GO:0016841;gbkey=CDS;go_function=ammonia-lyase activity|0016841||IEA;go_process=L-amino acid catabolic process|0170035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880091.1;locus_tag=LDO38_RS28140;product=HAL/PAL/TAL family ammonia-lyase;protein_id=WP_176321637.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 16645 17073 . + . ID=gene-LDO38_RS28145;Name=LDO38_RS28145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28145;old_locus_tag=BVI2075_90018 NZ_CAJZAL010000196.1 Protein Homology CDS 16645 17073 . + 0 ID=cds-WP_011880092.1;Parent=gene-LDO38_RS28145;Dbxref=GenBank:WP_011880092.1;Name=WP_011880092.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880092.1;locus_tag=LDO38_RS28145;product=acyl-CoA thioesterase;protein_id=WP_011880092.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 17064 17738 . + . ID=gene-LDO38_RS28150;Name=LDO38_RS28150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28150;old_locus_tag=BVI2075_90017 NZ_CAJZAL010000196.1 Protein Homology CDS 17064 17738 . + 0 ID=cds-WP_134206796.1;Parent=gene-LDO38_RS28150;Dbxref=GenBank:WP_134206796.1;Name=WP_134206796.1;Ontology_term=GO:0042953,GO:0044874,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=lipoprotein transport|0042953||IEA,lipoprotein localization to outer membrane|0044874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658626.1;locus_tag=LDO38_RS28150;product=outer membrane lipoprotein carrier protein LolA;protein_id=WP_134206796.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 17738 20146 . + . ID=gene-LDO38_RS28155;Name=LDO38_RS28155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28155;old_locus_tag=BVI2075_90019 NZ_CAJZAL010000196.1 Protein Homology CDS 17738 20146 . + 0 ID=cds-WP_224056741.1;Parent=gene-LDO38_RS28155;Dbxref=GenBank:WP_224056741.1;Name=WP_224056741.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402442.1;locus_tag=LDO38_RS28155;product=MMPL family transporter;protein_id=WP_224056741.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 20143 21330 . + . ID=gene-LDO38_RS28160;Name=LDO38_RS28160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28160;old_locus_tag=BVI2075_90020 NZ_CAJZAL010000196.1 Protein Homology CDS 20143 21330 . + 0 ID=cds-WP_224056742.1;Parent=gene-LDO38_RS28160;Dbxref=GenBank:WP_224056742.1;Name=WP_224056742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415747.1;locus_tag=LDO38_RS28160;product=beta-ketoacyl-[acyl-carrier-protein] synthase family protein;protein_id=WP_224056742.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 21332 21835 . + . ID=gene-LDO38_RS28165;Name=LDO38_RS28165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28165;old_locus_tag=BVI2075_90021 NZ_CAJZAL010000196.1 Protein Homology CDS 21332 21835 . + 0 ID=cds-WP_224056743.1;Parent=gene-LDO38_RS28165;Dbxref=GenBank:WP_224056743.1;Name=WP_224056743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880096.1;locus_tag=LDO38_RS28165;product=hotdog family protein;protein_id=WP_224056743.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 21832 22557 . + . ID=gene-LDO38_RS28170;Name=LDO38_RS28170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28170;old_locus_tag=BVI2075_90022 NZ_CAJZAL010000196.1 Protein Homology CDS 21832 22557 . + 0 ID=cds-WP_059461427.1;Parent=gene-LDO38_RS28170;Dbxref=GenBank:WP_059461427.1;Name=WP_059461427.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658630.1;locus_tag=LDO38_RS28170;product=3-ketoacyl-ACP reductase FabG2;protein_id=WP_059461427.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 22557 23786 . + . ID=gene-LDO38_RS28175;Name=LDO38_RS28175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28175;old_locus_tag=BVI2075_90023 NZ_CAJZAL010000196.1 Protein Homology CDS 22557 23786 . + 0 ID=cds-WP_034192757.1;Parent=gene-LDO38_RS28175;Dbxref=GenBank:WP_034192757.1;Name=WP_034192757.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880098.1;locus_tag=LDO38_RS28175;product=beta-ketoacyl-ACP synthase;protein_id=WP_034192757.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 23783 25006 . + . ID=gene-LDO38_RS28180;Name=LDO38_RS28180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28180;old_locus_tag=BVI2075_90024 NZ_CAJZAL010000196.1 Protein Homology CDS 23783 25006 . + 0 ID=cds-WP_176154588.1;Parent=gene-LDO38_RS28180;Dbxref=GenBank:WP_176154588.1;Name=WP_176154588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725835.1;locus_tag=LDO38_RS28180;product=beta-ketoacyl synthase N-terminal-like domain-containing protein;protein_id=WP_176154588.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 25039 25464 . + . ID=gene-LDO38_RS28185;Name=LDO38_RS28185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28185;old_locus_tag=BVI2075_90025 NZ_CAJZAL010000196.1 Protein Homology CDS 25039 25464 . + 0 ID=cds-WP_014725836.1;Parent=gene-LDO38_RS28185;Dbxref=GenBank:WP_014725836.1;Name=WP_014725836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403733.1;locus_tag=LDO38_RS28185;product=hypothetical protein;protein_id=WP_014725836.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 25475 25909 . + . ID=gene-LDO38_RS28190;Name=LDO38_RS28190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28190;old_locus_tag=BVI2075_90026 NZ_CAJZAL010000196.1 Protein Homology CDS 25475 25909 . + 0 ID=cds-WP_224056744.1;Parent=gene-LDO38_RS28190;Dbxref=GenBank:WP_224056744.1;Name=WP_224056744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658634.1;locus_tag=LDO38_RS28190;product=excinuclease ABC subunit A;protein_id=WP_224056744.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 25956 26675 . - . ID=gene-LDO38_RS28195;Name=LDO38_RS28195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28195;old_locus_tag=BVI2075_90027 NZ_CAJZAL010000196.1 Protein Homology CDS 25956 26675 . - 0 ID=cds-WP_059561355.1;Parent=gene-LDO38_RS28195;Dbxref=GenBank:WP_059561355.1;Name=WP_059561355.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403731.1;locus_tag=LDO38_RS28195;product=class I SAM-dependent methyltransferase;protein_id=WP_059561355.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 26785 28077 . + . ID=gene-LDO38_RS28200;Name=LDO38_RS28200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28200;old_locus_tag=BVI2075_90028 NZ_CAJZAL010000196.1 Protein Homology CDS 26785 28077 . + 0 ID=cds-WP_014725838.1;Parent=gene-LDO38_RS28200;Dbxref=GenBank:WP_014725838.1;Name=WP_014725838.1;Ontology_term=GO:0000166,GO:0016491,GO:0071949;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880103.1;locus_tag=LDO38_RS28200;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_014725838.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 28187 28666 . - . ID=gene-LDO38_RS28205;Name=LDO38_RS28205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28205;old_locus_tag=BVI2075_90029 NZ_CAJZAL010000196.1 Protein Homology CDS 28187 28666 . - 0 ID=cds-WP_014725839.1;Parent=gene-LDO38_RS28205;Dbxref=GenBank:WP_014725839.1;Name=WP_014725839.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880104.1;locus_tag=LDO38_RS28205;product=rubrerythrin family protein;protein_id=WP_014725839.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 28886 29170 . + . ID=gene-LDO38_RS28210;Name=LDO38_RS28210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28210;old_locus_tag=BVI2075_90031 NZ_CAJZAL010000196.1 Protein Homology CDS 28886 29170 . + 0 ID=cds-WP_011880105.1;Parent=gene-LDO38_RS28210;Dbxref=GenBank:WP_011880105.1;Name=WP_011880105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880105.1;locus_tag=LDO38_RS28210;product=PepSY domain-containing protein;protein_id=WP_011880105.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 29173 29796 . + . ID=gene-LDO38_RS28215;Name=LDO38_RS28215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28215;old_locus_tag=BVI2075_90030 NZ_CAJZAL010000196.1 Protein Homology CDS 29173 29796 . + 0 ID=cds-WP_014725840.1;Parent=gene-LDO38_RS28215;Dbxref=GenBank:WP_014725840.1;Name=WP_014725840.1;Ontology_term=GO:0009055,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880106.1;locus_tag=LDO38_RS28215;product=cytochrome b/b6 domain-containing protein;protein_id=WP_014725840.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 29771 30487 . + . ID=gene-LDO38_RS28220;Name=LDO38_RS28220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28220;old_locus_tag=BVI2075_90032 NZ_CAJZAL010000196.1 Protein Homology CDS 29771 30487 . + 0 ID=cds-WP_176154582.1;Parent=gene-LDO38_RS28220;Dbxref=GenBank:WP_176154582.1;Name=WP_176154582.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880107.1;locus_tag=LDO38_RS28220;product=response regulator transcription factor;protein_id=WP_176154582.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 30480 31841 . + . ID=gene-LDO38_RS28225;Name=LDO38_RS28225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28225;old_locus_tag=BVI2075_90033 NZ_CAJZAL010000196.1 Protein Homology CDS 30480 31841 . + 0 ID=cds-WP_034192751.1;Parent=gene-LDO38_RS28225;Dbxref=GenBank:WP_034192751.1;Name=WP_034192751.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725842.1;locus_tag=LDO38_RS28225;product=sensor histidine kinase;protein_id=WP_034192751.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 31900 32349 . - . ID=gene-LDO38_RS28230;Name=LDO38_RS28230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28230;old_locus_tag=BVI2075_90034 NZ_CAJZAL010000196.1 Protein Homology CDS 31900 32349 . - 0 ID=cds-WP_224056745.1;Parent=gene-LDO38_RS28230;Dbxref=GenBank:WP_224056745.1;Name=WP_224056745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880109.1;locus_tag=LDO38_RS28230;product=Fis family transcriptional regulator;protein_id=WP_224056745.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 32484 32969 . - . ID=gene-LDO38_RS28235;Name=LDO38_RS28235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28235;old_locus_tag=BVI2075_90035 NZ_CAJZAL010000196.1 Protein Homology CDS 32484 32969 . - 0 ID=cds-WP_014725843.1;Parent=gene-LDO38_RS28235;Dbxref=GenBank:WP_014725843.1;Name=WP_014725843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018423241.1;locus_tag=LDO38_RS28235;product=hypothetical protein;protein_id=WP_014725843.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 32966 33292 . - . ID=gene-LDO38_RS28240;Name=LDO38_RS28240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28240;old_locus_tag=BVI2075_90036 NZ_CAJZAL010000196.1 Protein Homology CDS 32966 33292 . - 0 ID=cds-WP_224056746.1;Parent=gene-LDO38_RS28240;Dbxref=GenBank:WP_224056746.1;Name=WP_224056746.1;Ontology_term=GO:0009055,GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880111.1;locus_tag=LDO38_RS28240;product=(2Fe-2S) ferredoxin domain-containing protein;protein_id=WP_224056746.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 33308 33607 . - . ID=gene-LDO38_RS28245;Name=LDO38_RS28245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28245;old_locus_tag=BVI2075_90037 NZ_CAJZAL010000196.1 Protein Homology CDS 33308 33607 . - 0 ID=cds-WP_011880112.1;Parent=gene-LDO38_RS28245;Dbxref=GenBank:WP_011880112.1;Name=WP_011880112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018423212.1;locus_tag=LDO38_RS28245;product=ferredoxin family protein;protein_id=WP_011880112.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 33604 34914 . - . ID=gene-LDO38_RS28250;Name=LDO38_RS28250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28250;old_locus_tag=BVI2075_90038 NZ_CAJZAL010000196.1 Protein Homology CDS 33604 34914 . - 0 ID=cds-WP_011880113.1;Parent=gene-LDO38_RS28250;Dbxref=GenBank:WP_011880113.1;Name=WP_011880113.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880113.1;locus_tag=LDO38_RS28250;product=FAD-dependent monooxygenase;protein_id=WP_011880113.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 34926 36032 . - . ID=gene-LDO38_RS28255;Name=LDO38_RS28255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28255;old_locus_tag=BVI2075_90039 NZ_CAJZAL010000196.1 Protein Homology CDS 34926 36032 . - 0 ID=cds-WP_034192750.1;Parent=gene-LDO38_RS28255;Dbxref=GenBank:WP_034192750.1;Name=WP_034192750.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880114.1;locus_tag=LDO38_RS28255;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_034192750.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 36029 36877 . - . ID=gene-LDO38_RS28260;Name=LDO38_RS28260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28260;old_locus_tag=BVI2075_90040 NZ_CAJZAL010000196.1 Protein Homology CDS 36029 36877 . - 0 ID=cds-WP_014725846.1;Parent=gene-LDO38_RS28260;Dbxref=GenBank:WP_014725846.1;Name=WP_014725846.1;Ontology_term=GO:0009055;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725846.1;locus_tag=LDO38_RS28260;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_014725846.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 36892 37230 . - . ID=gene-LDO38_RS28265;Name=nifW;gbkey=Gene;gene=nifW;gene_biotype=protein_coding;locus_tag=LDO38_RS28265;old_locus_tag=BVI2075_90041 NZ_CAJZAL010000196.1 Protein Homology CDS 36892 37230 . - 0 ID=cds-WP_014725847.1;Parent=gene-LDO38_RS28265;Dbxref=GenBank:WP_014725847.1;Name=WP_014725847.1;gbkey=CDS;gene=nifW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725847.1;locus_tag=LDO38_RS28265;product=nitrogenase stabilizing/protective protein NifW;protein_id=WP_014725847.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 37237 38031 . - . ID=gene-LDO38_RS28270;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=LDO38_RS28270;old_locus_tag=BVI2075_90042 NZ_CAJZAL010000196.1 Protein Homology CDS 37237 38031 . - 0 ID=cds-WP_224056747.1;Parent=gene-LDO38_RS28270;Dbxref=GenBank:WP_224056747.1;Name=WP_224056747.1;Ontology_term=GO:0006535,GO:0009001,GO:0005737;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||IEA;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725848.1;locus_tag=LDO38_RS28270;product=serine O-acetyltransferase;protein_id=WP_224056747.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 38028 39164 . - . ID=gene-LDO38_RS28275;Name=nifV;gbkey=Gene;gene=nifV;gene_biotype=protein_coding;locus_tag=LDO38_RS28275;old_locus_tag=BVI2075_90043 NZ_CAJZAL010000196.1 Protein Homology CDS 38028 39164 . - 0 ID=cds-WP_224056748.1;Parent=gene-LDO38_RS28275;Dbxref=GenBank:WP_224056748.1;Name=WP_224056748.1;Ontology_term=GO:0004410;gbkey=CDS;gene=nifV;go_function=homocitrate synthase activity|0004410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018423206.1;locus_tag=LDO38_RS28275;product=homocitrate synthase;protein_id=WP_224056748.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 39472 39807 . - . ID=gene-LDO38_RS28280;Name=LDO38_RS28280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28280;old_locus_tag=BVI2075_90044 NZ_CAJZAL010000196.1 Protein Homology CDS 39472 39807 . - 0 ID=cds-WP_059561368.1;Parent=gene-LDO38_RS28280;Dbxref=GenBank:WP_059561368.1;Name=WP_059561368.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880119.1;locus_tag=LDO38_RS28280;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_059561368.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 39827 41701 . - . ID=gene-LDO38_RS28285;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=LDO38_RS28285;old_locus_tag=BVI2075_90045 NZ_CAJZAL010000196.1 Protein Homology CDS 39827 41701 . - 0 ID=cds-WP_059561370.1;Parent=gene-LDO38_RS28285;Dbxref=GenBank:WP_059561370.1;Name=WP_059561370.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725851.1;locus_tag=LDO38_RS28285;product=Fe-S protein assembly chaperone HscA;protein_id=WP_059561370.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 41747 42070 . - . ID=gene-LDO38_RS28290;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=LDO38_RS28290;old_locus_tag=BVI2075_90046 NZ_CAJZAL010000196.1 Protein Homology CDS 41747 42070 . - 0 ID=cds-WP_011880121.1;Parent=gene-LDO38_RS28290;Dbxref=GenBank:WP_011880121.1;Name=WP_011880121.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=iscA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012205822.1;locus_tag=LDO38_RS28290;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_011880121.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 42078 42452 . - . ID=gene-LDO38_RS28295;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=LDO38_RS28295;old_locus_tag=BVI2075_90047 NZ_CAJZAL010000196.1 Protein Homology CDS 42078 42452 . - 0 ID=cds-WP_059463596.1;Parent=gene-LDO38_RS28295;Dbxref=GenBank:WP_059463596.1;Name=WP_059463596.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880122.1;locus_tag=LDO38_RS28295;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_059463596.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 42480 42914 . - . ID=gene-LDO38_RS28300;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=LDO38_RS28300;old_locus_tag=BVI2075_90048 NZ_CAJZAL010000196.1 Protein Homology CDS 42480 42914 . - 0 ID=cds-WP_011880123.1;Parent=gene-LDO38_RS28300;Dbxref=GenBank:WP_011880123.1;Name=WP_011880123.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007177253.1;locus_tag=LDO38_RS28300;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_011880123.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 43222 44937 . + . ID=gene-LDO38_RS28305;Name=nifA;gbkey=Gene;gene=nifA;gene_biotype=protein_coding;locus_tag=LDO38_RS28305;old_locus_tag=BVI2075_90049 NZ_CAJZAL010000196.1 Protein Homology CDS 43222 44937 . + 0 ID=cds-WP_059567867.1;Parent=gene-LDO38_RS28305;Dbxref=GenBank:WP_059567867.1;Name=WP_059567867.1;Ontology_term=GO:0006355,GO:0009399,GO:0003700;gbkey=CDS;gene=nifA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,nitrogen fixation|0009399||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725852.1;locus_tag=LDO38_RS28305;product=nif-specific transcriptional activator NifA;protein_id=WP_059567867.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 45306 46898 . + . ID=gene-LDO38_RS28310;Name=nifB;gbkey=Gene;gene=nifB;gene_biotype=protein_coding;locus_tag=LDO38_RS28310;old_locus_tag=BVI2075_90050 NZ_CAJZAL010000196.1 Protein Homology CDS 45306 46898 . + 0 ID=cds-WP_014725853.1;Parent=gene-LDO38_RS28310;Dbxref=GenBank:WP_014725853.1;Name=WP_014725853.1;Ontology_term=GO:0009399,GO:0051539,GO:1904047;gbkey=CDS;gene=nifB;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=nitrogen fixation|0009399||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725853.1;locus_tag=LDO38_RS28310;product=nitrogenase cofactor biosynthesis protein NifB;protein_id=WP_014725853.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 46941 47135 . + . ID=gene-LDO38_RS28315;Name=LDO38_RS28315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28315;old_locus_tag=BVI2075_90051 NZ_CAJZAL010000196.1 Protein Homology CDS 46941 47135 . + 0 ID=cds-WP_011880126.1;Parent=gene-LDO38_RS28315;Dbxref=GenBank:WP_011880126.1;Name=WP_011880126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020202109.1;locus_tag=LDO38_RS28315;product=4Fe-4S binding protein;protein_id=WP_011880126.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 47198 47602 . + . ID=gene-LDO38_RS28320;Name=LDO38_RS28320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28320;old_locus_tag=BVI2075_90052 NZ_CAJZAL010000196.1 Protein Homology CDS 47198 47602 . + 0 ID=cds-WP_059463594.1;Parent=gene-LDO38_RS28320;Dbxref=GenBank:WP_059463594.1;Name=WP_059463594.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880127.1;locus_tag=LDO38_RS28320;product=HesB/IscA family protein;protein_id=WP_059463594.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 47619 48191 . + . ID=gene-LDO38_RS28325;Name=LDO38_RS28325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28325;old_locus_tag=BVI2075_90053 NZ_CAJZAL010000196.1 Protein Homology CDS 47619 48191 . + 0 ID=cds-WP_011880128.1;Parent=gene-LDO38_RS28325;Dbxref=GenBank:WP_011880128.1;Name=WP_011880128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880128.1;locus_tag=LDO38_RS28325;product=hypothetical protein;protein_id=WP_011880128.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 48188 49132 . + . ID=gene-LDO38_RS28330;Name=LDO38_RS28330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28330;old_locus_tag=BVI2075_90054 NZ_CAJZAL010000196.1 Protein Homology CDS 48188 49132 . + 0 ID=cds-WP_224056749.1;Parent=gene-LDO38_RS28330;Dbxref=GenBank:WP_224056749.1;Name=WP_224056749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725854.1;locus_tag=LDO38_RS28330;product=4Fe4S-binding leucine-rich repeat protein;protein_id=WP_224056749.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 49125 49520 . + . ID=gene-LDO38_RS28335;Name=LDO38_RS28335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28335;old_locus_tag=BVI2075_90055 NZ_CAJZAL010000196.1 Protein Homology CDS 49125 49520 . + 0 ID=cds-WP_034192744.1;Parent=gene-LDO38_RS28335;Dbxref=GenBank:WP_034192744.1;Name=WP_034192744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725855.1;locus_tag=LDO38_RS28335;product=nitrogen fixation protein NifZ;protein_id=WP_034192744.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 49526 49801 . + . ID=gene-LDO38_RS28340;Name=LDO38_RS28340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28340;old_locus_tag=BVI2075_90056 NZ_CAJZAL010000196.1 Protein Homology CDS 49526 49801 . + 0 ID=cds-WP_011880131.1;Parent=gene-LDO38_RS28340;Dbxref=GenBank:WP_011880131.1;Name=WP_011880131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880131.1;locus_tag=LDO38_RS28340;product=nitrogen fixation protein NifZ;protein_id=WP_011880131.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 49798 50154 . + . ID=gene-LDO38_RS28345;Name=LDO38_RS28345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28345;old_locus_tag=BVI2075_90057 NZ_CAJZAL010000196.1 Protein Homology CDS 49798 50154 . + 0 ID=cds-WP_041494367.1;Parent=gene-LDO38_RS28345;Dbxref=GenBank:WP_041494367.1;Name=WP_041494367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880132.1;locus_tag=LDO38_RS28345;product=DUF3024 domain-containing protein;protein_id=WP_041494367.1;transl_table=11 NZ_CAJZAL010000196.1 RefSeq gene 50174 50954 . + . ID=gene-LDO38_RS28350;Name=LDO38_RS28350;end_range=50954,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28350;partial=true NZ_CAJZAL010000196.1 Protein Homology CDS 50174 50954 . + 0 ID=cds-WP_224056750.1;Parent=gene-LDO38_RS28350;Dbxref=GenBank:WP_224056750.1;Name=WP_224056750.1;Ontology_term=GO:0030170;end_range=50954,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725858.1;locus_tag=LDO38_RS28350;partial=true;product=cysteine desulfurase family protein;protein_id=WP_224056750.1;transl_table=11 ##sequence-region NZ_CAJZAL010000197.1 1 40650 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000197.1 RefSeq region 1 40650 . + . ID=NZ_CAJZAL010000197.1:1..40650;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_90 NZ_CAJZAL010000197.1 RefSeq gene 1 291 . - . ID=gene-LDO38_RS28355;Name=LDO38_RS28355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28355;partial=true;start_range=.,1 NZ_CAJZAL010000197.1 Protein Homology CDS 1 291 . - 0 ID=cds-WP_290371188.1;Parent=gene-LDO38_RS28355;Dbxref=GenBank:WP_290371188.1;Name=WP_290371188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328826.1;locus_tag=LDO38_RS28355;partial=true;product=biotin/lipoyl-containing protein;protein_id=WP_290371188.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 362 3058 . - . ID=gene-LDO38_RS28360;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=LDO38_RS28360;old_locus_tag=BVI2075_900002 NZ_CAJZAL010000197.1 Protein Homology CDS 362 3058 . - 0 ID=cds-WP_011885426.1;Parent=gene-LDO38_RS28360;Dbxref=GenBank:WP_011885426.1;Name=WP_011885426.1;Ontology_term=GO:0006086,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478378.1;locus_tag=LDO38_RS28360;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_011885426.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq pseudogene 3194 3411 . - . ID=gene-LDO38_RS30705;Name=LDO38_RS30705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30705;partial=true;pseudo=true;start_range=.,3194 NZ_CAJZAL010000197.1 Protein Homology CDS 3194 3411 . - 0 ID=cds-LDO38_RS30705;Parent=gene-LDO38_RS30705;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524718.1;locus_tag=LDO38_RS30705;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3194;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 3331 5847 . + . ID=gene-LDO38_RS28365;Name=fixL;gbkey=Gene;gene=fixL;gene_biotype=protein_coding;locus_tag=LDO38_RS28365;old_locus_tag=BVI2075_900004 NZ_CAJZAL010000197.1 Protein Homology CDS 3331 5847 . + 0 ID=cds-WP_124259919.1;Parent=gene-LDO38_RS28365;Dbxref=GenBank:WP_124259919.1;Name=WP_124259919.1;gbkey=CDS;gene=fixL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758934.1;locus_tag=LDO38_RS28365;product=oxygen sensor histidine kinase FixL;protein_id=WP_124259919.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 5844 6482 . + . ID=gene-LDO38_RS28370;Name=fixJ;gbkey=Gene;gene=fixJ;gene_biotype=protein_coding;locus_tag=LDO38_RS28370;old_locus_tag=BVI2075_900005 NZ_CAJZAL010000197.1 Protein Homology CDS 5844 6482 . + 0 ID=cds-WP_006493245.1;Parent=gene-LDO38_RS28370;Dbxref=GenBank:WP_006493245.1;Name=WP_006493245.1;gbkey=CDS;gene=fixJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698749.1;locus_tag=LDO38_RS28370;product=oxygen response regulator transcription factor FixJ;protein_id=WP_006493245.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 6722 7576 . + . ID=gene-LDO38_RS28375;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=LDO38_RS28375;old_locus_tag=BVI2075_900006 NZ_CAJZAL010000197.1 Protein Homology CDS 6722 7576 . + 0 ID=cds-WP_011885428.1;Parent=gene-LDO38_RS28375;Dbxref=GenBank:WP_011885428.1;Name=WP_011885428.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885428.1;locus_tag=LDO38_RS28375;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_011885428.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 7871 9958 . + . ID=gene-LDO38_RS28380;Name=LDO38_RS28380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28380;old_locus_tag=BVI2075_900007 NZ_CAJZAL010000197.1 Protein Homology CDS 7871 9958 . + 0 ID=cds-WP_014723292.1;Parent=gene-LDO38_RS28380;Dbxref=GenBank:WP_014723292.1;Name=WP_014723292.1;Ontology_term=GO:0006508,GO:0004222,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723292.1;locus_tag=LDO38_RS28380;product=M3 family metallopeptidase;protein_id=WP_014723292.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 10021 11427 . - . ID=gene-LDO38_RS28385;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=LDO38_RS28385;old_locus_tag=BVI2075_900008 NZ_CAJZAL010000197.1 Protein Homology CDS 10021 11427 . - 0 ID=cds-WP_124259918.1;Parent=gene-LDO38_RS28385;Dbxref=GenBank:WP_124259918.1;Name=WP_124259918.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723293.1;locus_tag=LDO38_RS28385;product=DNA polymerase IV;protein_id=WP_124259918.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 11608 12300 . + . ID=gene-LDO38_RS28390;Name=LDO38_RS28390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28390;old_locus_tag=BVI2075_900009 NZ_CAJZAL010000197.1 Protein Homology CDS 11608 12300 . + 0 ID=cds-WP_224056751.1;Parent=gene-LDO38_RS28390;Dbxref=GenBank:WP_224056751.1;Name=WP_224056751.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758930.1;locus_tag=LDO38_RS28390;product=aspartate/glutamate racemase family protein;protein_id=WP_224056751.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 12383 12459 . - . ID=gene-LDO38_RS28395;Name=LDO38_RS28395;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS28395;old_locus_tag=BVI2075_TRNA34 NZ_CAJZAL010000197.1 tRNAscan-SE tRNA 12383 12459 . - . ID=rna-LDO38_RS28395;Parent=gene-LDO38_RS28395;anticodon=(pos:complement(12423..12425));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS28395;product=tRNA-Met NZ_CAJZAL010000197.1 tRNAscan-SE exon 12383 12459 . - . ID=exon-LDO38_RS28395-1;Parent=rna-LDO38_RS28395;anticodon=(pos:complement(12423..12425));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS28395;product=tRNA-Met NZ_CAJZAL010000197.1 RefSeq gene 12652 13428 . + . ID=gene-LDO38_RS28400;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=LDO38_RS28400;old_locus_tag=BVI2075_900010 NZ_CAJZAL010000197.1 Protein Homology CDS 12652 13428 . + 0 ID=cds-WP_059462111.1;Parent=gene-LDO38_RS28400;Dbxref=GenBank:WP_059462111.1;Name=WP_059462111.1;Ontology_term=GO:0006281,GO:0008311;gbkey=CDS;gene=xth;go_function=double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890139.1;locus_tag=LDO38_RS28400;product=exodeoxyribonuclease III;protein_id=WP_059462111.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 13459 15603 . - . ID=gene-LDO38_RS28405;Name=LDO38_RS28405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28405;old_locus_tag=BVI2075_900011 NZ_CAJZAL010000197.1 Protein Homology CDS 13459 15603 . - 0 ID=cds-WP_045578950.1;Parent=gene-LDO38_RS28405;Dbxref=GenBank:WP_045578950.1;Name=WP_045578950.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885433.1;locus_tag=LDO38_RS28405;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_045578950.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 15682 17202 . - . ID=gene-LDO38_RS28410;Name=ntrC;gbkey=Gene;gene=ntrC;gene_biotype=protein_coding;locus_tag=LDO38_RS28410;old_locus_tag=BVI2075_900012 NZ_CAJZAL010000197.1 Protein Homology CDS 15682 17202 . - 0 ID=cds-WP_011885434.1;Parent=gene-LDO38_RS28410;Dbxref=GenBank:WP_011885434.1;Name=WP_011885434.1;Ontology_term=GO:0000160,GO:0006808,GO:0000156,GO:0003677,GO:0005524;gbkey=CDS;gene=ntrC;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413938.1;locus_tag=LDO38_RS28410;product=nitrogen regulation protein NR(I);protein_id=WP_011885434.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 17249 18391 . - . ID=gene-LDO38_RS28415;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=LDO38_RS28415;old_locus_tag=BVI2075_900013 NZ_CAJZAL010000197.1 Protein Homology CDS 17249 18391 . - 0 ID=cds-WP_014723296.1;Parent=gene-LDO38_RS28415;Dbxref=GenBank:WP_014723296.1;Name=WP_014723296.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192981.1;locus_tag=LDO38_RS28415;product=nitrogen regulation protein NR(II);protein_id=WP_014723296.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 18553 19968 . - . ID=gene-LDO38_RS28420;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=LDO38_RS28420;old_locus_tag=BVI2075_900014 NZ_CAJZAL010000197.1 Protein Homology CDS 18553 19968 . - 0 ID=cds-WP_011885436.1;Parent=gene-LDO38_RS28420;Dbxref=GenBank:WP_011885436.1;Name=WP_011885436.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017777963.1;locus_tag=LDO38_RS28420;product=type I glutamate--ammonia ligase;protein_id=WP_011885436.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 20375 20839 . + . ID=gene-LDO38_RS28425;Name=LDO38_RS28425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28425;old_locus_tag=BVI2075_900016 NZ_CAJZAL010000197.1 Protein Homology CDS 20375 20839 . + 0 ID=cds-WP_011885437.1;Parent=gene-LDO38_RS28425;Dbxref=GenBank:WP_011885437.1;Name=WP_011885437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010116266.1;locus_tag=LDO38_RS28425;product=rhodanese-like domain-containing protein;protein_id=WP_011885437.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 21000 21815 . - . ID=gene-LDO38_RS28430;Name=LDO38_RS28430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28430;old_locus_tag=BVI2075_900017 NZ_CAJZAL010000197.1 Protein Homology CDS 21000 21815 . - 0 ID=cds-WP_011885438.1;Parent=gene-LDO38_RS28430;Dbxref=GenBank:WP_011885438.1;Name=WP_011885438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896604.1;locus_tag=LDO38_RS28430;product=competence/damage-inducible protein A;protein_id=WP_011885438.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 21812 22639 . - . ID=gene-LDO38_RS28435;Name=LDO38_RS28435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28435;old_locus_tag=BVI2075_900018 NZ_CAJZAL010000197.1 Protein Homology CDS 21812 22639 . - 0 ID=cds-WP_059474586.1;Parent=gene-LDO38_RS28435;Dbxref=GenBank:WP_059474586.1;Name=WP_059474586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478362.1;locus_tag=LDO38_RS28435;product=EI24 domain-containing protein;protein_id=WP_059474586.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 22749 23723 . - . ID=gene-LDO38_RS28440;Name=LDO38_RS28440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28440;old_locus_tag=BVI2075_900019 NZ_CAJZAL010000197.1 Protein Homology CDS 22749 23723 . - 0 ID=cds-WP_011885440.1;Parent=gene-LDO38_RS28440;Dbxref=GenBank:WP_011885440.1;Name=WP_011885440.1;Ontology_term=GO:0006629,GO:0008610,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=lipid metabolic process|0006629||IEA,lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657401.1;locus_tag=LDO38_RS28440;product=sterol desaturase family protein;protein_id=WP_011885440.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 23740 24729 . - . ID=gene-LDO38_RS28445;Name=LDO38_RS28445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28445;old_locus_tag=BVI2075_900020 NZ_CAJZAL010000197.1 Protein Homology CDS 23740 24729 . - 0 ID=cds-WP_011885441.1;Parent=gene-LDO38_RS28445;Dbxref=GenBank:WP_011885441.1;Name=WP_011885441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600540.1;locus_tag=LDO38_RS28445;product=beta-propeller fold lactonase family protein;protein_id=WP_011885441.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 24876 29060 . - . ID=gene-LDO38_RS28450;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=LDO38_RS28450;old_locus_tag=BVI2075_900021 NZ_CAJZAL010000197.1 Protein Homology CDS 24876 29060 . - 0 ID=cds-WP_124259917.1;Parent=gene-LDO38_RS28450;Dbxref=GenBank:WP_124259917.1;Name=WP_124259917.1;Ontology_term=GO:0003724;gbkey=CDS;gene=hrpA;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004544130.1;locus_tag=LDO38_RS28450;product=ATP-dependent RNA helicase HrpA;protein_id=WP_124259917.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 29084 30463 . + . ID=gene-LDO38_RS28455;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=LDO38_RS28455;old_locus_tag=BVI2075_900023 NZ_CAJZAL010000197.1 Protein Homology CDS 29084 30463 . + 0 ID=cds-WP_014723300.1;Parent=gene-LDO38_RS28455;Dbxref=GenBank:WP_014723300.1;Name=WP_014723300.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602335.1;locus_tag=LDO38_RS28455;product=amino-acid N-acetyltransferase;protein_id=WP_014723300.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 30514 30789 . + . ID=gene-LDO38_RS28460;Name=LDO38_RS28460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28460;old_locus_tag=BVI2075_900022 NZ_CAJZAL010000197.1 Protein Homology CDS 30514 30789 . + 0 ID=cds-WP_006478357.1;Parent=gene-LDO38_RS28460;Dbxref=GenBank:WP_006478357.1;Name=WP_006478357.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401987.1;locus_tag=LDO38_RS28460;product=oxidative damage protection protein;protein_id=WP_006478357.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 30991 31065 . + . ID=gene-LDO38_RS28465;Name=LDO38_RS28465;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO38_RS28465;old_locus_tag=BVI2075_TRNA26 NZ_CAJZAL010000197.1 tRNAscan-SE tRNA 30991 31065 . + . ID=rna-LDO38_RS28465;Parent=gene-LDO38_RS28465;anticodon=(pos:31023..31025);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS28465;product=tRNA-Val NZ_CAJZAL010000197.1 tRNAscan-SE exon 30991 31065 . + . ID=exon-LDO38_RS28465-1;Parent=rna-LDO38_RS28465;anticodon=(pos:31023..31025);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO38_RS28465;product=tRNA-Val NZ_CAJZAL010000197.1 RefSeq gene 31111 31455 . - . ID=gene-LDO38_RS28470;Name=LDO38_RS28470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28470 NZ_CAJZAL010000197.1 GeneMarkS-2+ CDS 31111 31455 . - 0 ID=cds-WP_059696978.1;Parent=gene-LDO38_RS28470;Dbxref=GenBank:WP_059696978.1;Name=WP_059696978.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS28470;product=hypothetical protein;protein_id=WP_059696978.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 31950 33848 . + . ID=gene-LDO38_RS28475;Name=LDO38_RS28475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28475;old_locus_tag=BVI2075_900024 NZ_CAJZAL010000197.1 Protein Homology CDS 31950 33848 . + 0 ID=cds-WP_059475965.1;Parent=gene-LDO38_RS28475;Dbxref=GenBank:WP_059475965.1;Name=WP_059475965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723307.1;locus_tag=LDO38_RS28475;product=DUF262 domain-containing protein;protein_id=WP_059475965.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 34199 35536 . - . ID=gene-LDO38_RS28480;Name=LDO38_RS28480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28480;old_locus_tag=BVI2075_900026 NZ_CAJZAL010000197.1 Protein Homology CDS 34199 35536 . - 0 ID=cds-WP_011885444.1;Parent=gene-LDO38_RS28480;Dbxref=GenBank:WP_011885444.1;Name=WP_011885444.1;Ontology_term=GO:0006542,GO:0004356,GO:0005524,GO:0046872;gbkey=CDS;go_function=glutamine synthetase activity|0004356||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657410.1;locus_tag=LDO38_RS28480;product=glutamine synthetase family protein;protein_id=WP_011885444.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 35549 36391 . - . ID=gene-LDO38_RS28485;Name=LDO38_RS28485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28485;old_locus_tag=BVI2075_900027 NZ_CAJZAL010000197.1 Protein Homology CDS 35549 36391 . - 0 ID=cds-WP_224056753.1;Parent=gene-LDO38_RS28485;Dbxref=GenBank:WP_224056753.1;Name=WP_224056753.1;Ontology_term=GO:0016787,GO:0016811;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723308.1;locus_tag=LDO38_RS28485;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_224056753.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 37027 37827 . - . ID=gene-LDO38_RS28490;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=LDO38_RS28490;old_locus_tag=BVI2075_900029 NZ_CAJZAL010000197.1 Protein Homology CDS 37027 37827 . - 0 ID=cds-WP_224056752.1;Parent=gene-LDO38_RS28490;Dbxref=GenBank:WP_224056752.1;Name=WP_224056752.1;Ontology_term=GO:0019557,GO:0050129;gbkey=CDS;gene=hutG;go_function=N-formylglutamate deformylase activity|0050129||IEA;go_process=L-histidine catabolic process to glutamate and formate|0019557||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885447.1;locus_tag=LDO38_RS28490;product=N-formylglutamate deformylase;protein_id=WP_224056752.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 37886 39262 . - . ID=gene-LDO38_RS28495;Name=LDO38_RS28495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28495;old_locus_tag=BVI2075_900030 NZ_CAJZAL010000197.1 Protein Homology CDS 37886 39262 . - 0 ID=cds-WP_059462102.1;Parent=gene-LDO38_RS28495;Dbxref=GenBank:WP_059462102.1;Name=WP_059462102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488097.1;locus_tag=LDO38_RS28495;product=formimidoylglutamate deiminase;protein_id=WP_059462102.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq gene 39286 40509 . - . ID=gene-LDO38_RS28500;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=LDO38_RS28500;old_locus_tag=BVI2075_900031 NZ_CAJZAL010000197.1 Protein Homology CDS 39286 40509 . - 0 ID=cds-WP_045578946.1;Parent=gene-LDO38_RS28500;Dbxref=GenBank:WP_045578946.1;Name=WP_045578946.1;Ontology_term=GO:0019556,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488078.1;locus_tag=LDO38_RS28500;product=imidazolonepropionase;protein_id=WP_045578946.1;transl_table=11 NZ_CAJZAL010000197.1 RefSeq pseudogene 40514 40650 . - . ID=gene-LDO38_RS28505;Name=LDO38_RS28505;end_range=40650,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS28505;partial=true;pseudo=true NZ_CAJZAL010000197.1 Protein Homology CDS 40514 40650 . - 2 ID=cds-LDO38_RS28505;Parent=gene-LDO38_RS28505;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=40650,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328849.1;locus_tag=LDO38_RS28505;partial=true;product=HutD family protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000198.1 1 711 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000198.1 RefSeq region 1 711 . + . ID=NZ_CAJZAL010000198.1:1..711;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_91 NZ_CAJZAL010000198.1 RefSeq gene 1 106 . + . ID=gene-LDO38_RS28510;Name=LDO38_RS28510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28510;partial=true;start_range=.,1 NZ_CAJZAL010000198.1 Protein Homology CDS 1 106 . + 1 ID=cds-WP_224056755.1;Parent=gene-LDO38_RS28510;Dbxref=GenBank:WP_224056755.1;Name=WP_224056755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372538.1;locus_tag=LDO38_RS28510;partial=true;product=putative glycoside hydrolase;protein_id=WP_224056755.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000198.1 RefSeq gene 504 711 . + . ID=gene-LDO38_RS28515;Name=LDO38_RS28515;end_range=711,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28515;partial=true;start_range=.,504 NZ_CAJZAL010000198.1 Protein Homology CDS 504 711 . + 2 ID=cds-WP_224056754.1;Parent=gene-LDO38_RS28515;Dbxref=GenBank:WP_224056754.1;Name=WP_224056754.1;end_range=711,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726004.1;locus_tag=LDO38_RS28515;partial=true;product=hypothetical protein;protein_id=WP_224056754.1;start_range=.,504;transl_table=11 ##sequence-region NZ_CAJZAL010000199.1 1 11817 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000199.1 RefSeq region 1 11817 . + . ID=NZ_CAJZAL010000199.1:1..11817;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_92 NZ_CAJZAL010000199.1 RefSeq pseudogene 1 164 . + . ID=gene-LDO38_RS30710;Name=LDO38_RS30710;end_range=164,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30710;old_locus_tag=BVI2075_920001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000199.1 Protein Homology CDS 1 164 . + 1 ID=cds-LDO38_RS30710;Parent=gene-LDO38_RS30710;Note=catalyzes the interconversion of alpha-D-mannose 1-phosphate to alpha-D-mannose 6-phosphate and alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=164,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897868.1;locus_tag=LDO38_RS30710;partial=true;product=phosphomannomutase/phosphoglucomutase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000199.1 RefSeq pseudogene 175 323 . + . ID=gene-LDO38_RS30715;Name=LDO38_RS30715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30715;old_locus_tag=BVI2075_920002;partial=true;pseudo=true;start_range=.,175 NZ_CAJZAL010000199.1 Protein Homology CDS 175 323 . + 2 ID=cds-LDO38_RS30715;Parent=gene-LDO38_RS30715;Note=catalyzes the interconversion of alpha-D-mannose 1-phosphate to alpha-D-mannose 6-phosphate and alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012626.7;locus_tag=LDO38_RS30715;partial=true;product=phosphomannomutase/phosphoglucomutase;pseudo=true;start_range=.,175;transl_table=11 NZ_CAJZAL010000199.1 RefSeq gene 475 783 . + . ID=gene-LDO38_RS28525;Name=LDO38_RS28525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28525;old_locus_tag=BVI2075_920003 NZ_CAJZAL010000199.1 Protein Homology CDS 475 783 . + 0 ID=cds-WP_011880553.1;Parent=gene-LDO38_RS28525;Dbxref=GenBank:WP_011880553.1;Name=WP_011880553.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880553.1;locus_tag=LDO38_RS28525;product=H-NS histone family protein;protein_id=WP_011880553.1;transl_table=11 NZ_CAJZAL010000199.1 RefSeq gene 1537 7431 . + . ID=gene-LDO38_RS28530;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=LDO38_RS28530;old_locus_tag=BVI2075_920007 NZ_CAJZAL010000199.1 Protein Homology CDS 1537 7431 . + 0 ID=cds-WP_059463208.1;Parent=gene-LDO38_RS28530;Dbxref=GenBank:WP_059463208.1;Name=WP_059463208.1;Ontology_term=GO:0006289,GO:0003677,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrA;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004544933.1;locus_tag=LDO38_RS28530;product=excinuclease ABC subunit UvrA;protein_id=WP_059463208.1;transl_table=11 NZ_CAJZAL010000199.1 RefSeq gene 7639 8088 . - . ID=gene-LDO38_RS28535;Name=LDO38_RS28535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28535;old_locus_tag=BVI2075_920009 NZ_CAJZAL010000199.1 Protein Homology CDS 7639 8088 . - 0 ID=cds-WP_034193662.1;Parent=gene-LDO38_RS28535;Dbxref=GenBank:WP_034193662.1;Name=WP_034193662.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880551.1;locus_tag=LDO38_RS28535;product=GtrA family protein;protein_id=WP_034193662.1;transl_table=11 NZ_CAJZAL010000199.1 RefSeq gene 8085 9593 . - . ID=gene-LDO38_RS28540;Name=LDO38_RS28540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28540;old_locus_tag=BVI2075_920010 NZ_CAJZAL010000199.1 Protein Homology CDS 8085 9593 . - 0 ID=cds-WP_034193661.1;Parent=gene-LDO38_RS28540;Dbxref=GenBank:WP_034193661.1;Name=WP_034193661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880550.1;locus_tag=LDO38_RS28540;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_034193661.1;transl_table=11 NZ_CAJZAL010000199.1 RefSeq gene 9695 11731 . - . ID=gene-LDO38_RS28545;Name=LDO38_RS28545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28545;old_locus_tag=BVI2075_920011 NZ_CAJZAL010000199.1 Protein Homology CDS 9695 11731 . - 0 ID=cds-WP_224056756.1;Parent=gene-LDO38_RS28545;Dbxref=GenBank:WP_224056756.1;Name=WP_224056756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726193.1;locus_tag=LDO38_RS28545;product=hypothetical protein;protein_id=WP_224056756.1;transl_table=11 ##sequence-region NZ_CAJZAL010000200.1 1 61318 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000200.1 RefSeq region 1 61318 . + . ID=NZ_CAJZAL010000200.1:1..61318;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_93 NZ_CAJZAL010000200.1 RefSeq gene 128 559 . - . ID=gene-LDO38_RS28550;Name=LDO38_RS28550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28550;old_locus_tag=BVI2075_930001 NZ_CAJZAL010000200.1 Protein Homology CDS 128 559 . - 0 ID=cds-WP_011880795.1;Parent=gene-LDO38_RS28550;Dbxref=GenBank:WP_011880795.1;Name=WP_011880795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880795.1;locus_tag=LDO38_RS28550;product=YciI family protein;protein_id=WP_011880795.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 823 2583 . - . ID=gene-LDO38_RS28555;Name=LDO38_RS28555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28555;old_locus_tag=BVI2075_930002 NZ_CAJZAL010000200.1 Protein Homology CDS 823 2583 . - 0 ID=cds-WP_011880794.1;Parent=gene-LDO38_RS28555;Dbxref=GenBank:WP_011880794.1;Name=WP_011880794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481958.1;locus_tag=LDO38_RS28555;product=ATP-binding protein;protein_id=WP_011880794.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 2743 2973 . + . ID=gene-LDO38_RS28560;Name=LDO38_RS28560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28560;old_locus_tag=BVI2075_930003 NZ_CAJZAL010000200.1 Protein Homology CDS 2743 2973 . + 0 ID=cds-WP_011880793.1;Parent=gene-LDO38_RS28560;Dbxref=GenBank:WP_011880793.1;Name=WP_011880793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481962.1;locus_tag=LDO38_RS28560;product=hypothetical protein;protein_id=WP_011880793.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 3004 3705 . - . ID=gene-LDO38_RS28565;Name=LDO38_RS28565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28565;old_locus_tag=BVI2075_930004 NZ_CAJZAL010000200.1 Protein Homology CDS 3004 3705 . - 0 ID=cds-WP_069240451.1;Parent=gene-LDO38_RS28565;Dbxref=GenBank:WP_069240451.1;Name=WP_069240451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880792.1;locus_tag=LDO38_RS28565;product=MBL fold metallo-hydrolase;protein_id=WP_069240451.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 3854 4615 . - . ID=gene-LDO38_RS28570;Name=LDO38_RS28570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28570;old_locus_tag=BVI2075_930005 NZ_CAJZAL010000200.1 Protein Homology CDS 3854 4615 . - 0 ID=cds-WP_085954514.1;Parent=gene-LDO38_RS28570;Dbxref=GenBank:WP_085954514.1;Name=WP_085954514.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547075.1;locus_tag=LDO38_RS28570;product=ABC transporter permease;protein_id=WP_085954514.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 4630 5574 . - . ID=gene-LDO38_RS28575;Name=LDO38_RS28575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28575;old_locus_tag=BVI2075_930006 NZ_CAJZAL010000200.1 Protein Homology CDS 4630 5574 . - 0 ID=cds-WP_014723986.1;Parent=gene-LDO38_RS28575;Dbxref=GenBank:WP_014723986.1;Name=WP_014723986.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758876.1;locus_tag=LDO38_RS28575;product=ABC transporter ATP-binding protein;protein_id=WP_014723986.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 6429 8039 . + . ID=gene-LDO38_RS28580;Name=LDO38_RS28580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28580;old_locus_tag=BVI2075_930008 NZ_CAJZAL010000200.1 Protein Homology CDS 6429 8039 . + 0 ID=cds-WP_034195501.1;Parent=gene-LDO38_RS28580;Dbxref=GenBank:WP_034195501.1;Name=WP_034195501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004555859.1;locus_tag=LDO38_RS28580;product=DUF2957 domain-containing protein;protein_id=WP_034195501.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 8111 9364 . + . ID=gene-LDO38_RS28585;Name=LDO38_RS28585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28585;old_locus_tag=BVI2075_930009 NZ_CAJZAL010000200.1 Protein Homology CDS 8111 9364 . + 0 ID=cds-WP_045577721.1;Parent=gene-LDO38_RS28585;Dbxref=GenBank:WP_045577721.1;Name=WP_045577721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898510.1;locus_tag=LDO38_RS28585;product=DUF2957 domain-containing protein;protein_id=WP_045577721.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 9430 10254 . + . ID=gene-LDO38_RS28590;Name=LDO38_RS28590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28590;old_locus_tag=BVI2075_930010 NZ_CAJZAL010000200.1 Protein Homology CDS 9430 10254 . + 0 ID=cds-WP_014723982.1;Parent=gene-LDO38_RS28590;Dbxref=GenBank:WP_014723982.1;Name=WP_014723982.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898511.1;locus_tag=LDO38_RS28590;product=OmpW/AlkL family protein;protein_id=WP_014723982.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 10376 10879 . + . ID=gene-LDO38_RS28595;Name=LDO38_RS28595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28595;old_locus_tag=BVI2075_930011 NZ_CAJZAL010000200.1 Protein Homology CDS 10376 10879 . + 0 ID=cds-WP_011880786.1;Parent=gene-LDO38_RS28595;Dbxref=GenBank:WP_011880786.1;Name=WP_011880786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752709.1;locus_tag=LDO38_RS28595;product=hypothetical protein;protein_id=WP_011880786.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 11110 12231 . + . ID=gene-LDO38_RS28600;Name=LDO38_RS28600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28600;old_locus_tag=BVI2075_930013 NZ_CAJZAL010000200.1 Protein Homology CDS 11110 12231 . + 0 ID=cds-WP_011880785.1;Parent=gene-LDO38_RS28600;Dbxref=GenBank:WP_011880785.1;Name=WP_011880785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880785.1;locus_tag=LDO38_RS28600;product=hypothetical protein;protein_id=WP_011880785.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 12292 13992 . - . ID=gene-LDO38_RS28605;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=LDO38_RS28605;old_locus_tag=BVI2075_930015 NZ_CAJZAL010000200.1 Protein Homology CDS 12292 13992 . - 0 ID=cds-WP_060042493.1;Parent=gene-LDO38_RS28605;Dbxref=GenBank:WP_060042493.1;Name=WP_060042493.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880784.1;locus_tag=LDO38_RS28605;product=choline dehydrogenase;protein_id=WP_060042493.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 14015 15484 . - . ID=gene-LDO38_RS28610;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=LDO38_RS28610;old_locus_tag=BVI2075_930016 NZ_CAJZAL010000200.1 Protein Homology CDS 14015 15484 . - 0 ID=cds-WP_034195542.1;Parent=gene-LDO38_RS28610;Dbxref=GenBank:WP_034195542.1;Name=WP_034195542.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533333.1;locus_tag=LDO38_RS28610;product=betaine-aldehyde dehydrogenase;protein_id=WP_034195542.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 15517 16101 . - . ID=gene-LDO38_RS28615;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=LDO38_RS28615;old_locus_tag=BVI2075_930017 NZ_CAJZAL010000200.1 Protein Homology CDS 15517 16101 . - 0 ID=cds-WP_011880782.1;Parent=gene-LDO38_RS28615;Dbxref=GenBank:WP_011880782.1;Name=WP_011880782.1;Ontology_term=GO:0003677;gbkey=CDS;gene=betI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898516.1;locus_tag=LDO38_RS28615;product=transcriptional regulator BetI;protein_id=WP_011880782.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 16396 17592 . + . ID=gene-LDO38_RS28620;Name=fdhA;gbkey=Gene;gene=fdhA;gene_biotype=protein_coding;locus_tag=LDO38_RS28620;old_locus_tag=BVI2075_930018 NZ_CAJZAL010000200.1 Protein Homology CDS 16396 17592 . + 0 ID=cds-WP_011880781.1;Parent=gene-LDO38_RS28620;Dbxref=GenBank:WP_011880781.1;Name=WP_011880781.1;Ontology_term=GO:0046292,GO:0018467;gbkey=CDS;gene=fdhA;go_function=formaldehyde dehydrogenase (NAD+) activity|0018467||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396349.1;locus_tag=LDO38_RS28620;product=formaldehyde dehydrogenase%2C glutathione-independent;protein_id=WP_011880781.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 17688 18995 . - . ID=gene-LDO38_RS28625;Name=LDO38_RS28625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28625;old_locus_tag=BVI2075_930019 NZ_CAJZAL010000200.1 Protein Homology CDS 17688 18995 . - 0 ID=cds-WP_059462657.1;Parent=gene-LDO38_RS28625;Dbxref=GenBank:WP_059462657.1;Name=WP_059462657.1;Ontology_term=GO:0030001,GO:0046872,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion binding|0046872||IEA,metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880780.1;locus_tag=LDO38_RS28625;product=NRAMP family divalent metal transporter;protein_id=WP_059462657.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 19411 20226 . - . ID=gene-LDO38_RS28630;Name=LDO38_RS28630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28630;old_locus_tag=BVI2075_930020 NZ_CAJZAL010000200.1 Protein Homology CDS 19411 20226 . - 0 ID=cds-WP_069240443.1;Parent=gene-LDO38_RS28630;Dbxref=GenBank:WP_069240443.1;Name=WP_069240443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880779.1;locus_tag=LDO38_RS28630;product=ATP-dependent serine protease;protein_id=WP_069240443.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 21017 22045 . - . ID=gene-LDO38_RS28635;Name=LDO38_RS28635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28635;old_locus_tag=BVI2075_930022 NZ_CAJZAL010000200.1 Protein Homology CDS 21017 22045 . - 0 ID=cds-WP_011880777.1;Parent=gene-LDO38_RS28635;Dbxref=GenBank:WP_011880777.1;Name=WP_011880777.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017328620.1;locus_tag=LDO38_RS28635;product=GlxA family transcriptional regulator;protein_id=WP_011880777.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 22066 22485 . - . ID=gene-LDO38_RS30720;Name=LDO38_RS30720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30720 NZ_CAJZAL010000200.1 GeneMarkS-2+ CDS 22066 22485 . - 0 ID=cds-WP_014723976.1;Parent=gene-LDO38_RS30720;Dbxref=GenBank:WP_014723976.1;Name=WP_014723976.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30720;product=hypothetical protein;protein_id=WP_014723976.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 22495 23769 . + . ID=gene-LDO38_RS28640;Name=LDO38_RS28640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28640;old_locus_tag=BVI2075_930023 NZ_CAJZAL010000200.1 Protein Homology CDS 22495 23769 . + 0 ID=cds-WP_014723975.1;Parent=gene-LDO38_RS28640;Dbxref=GenBank:WP_014723975.1;Name=WP_014723975.1;Ontology_term=GO:0019264,GO:0004372,GO:0030170;gbkey=CDS;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603909.1;locus_tag=LDO38_RS28640;product=serine hydroxymethyltransferase;protein_id=WP_014723975.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 23812 24783 . + . ID=gene-LDO38_RS28645;Name=LDO38_RS28645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28645;old_locus_tag=BVI2075_930024 NZ_CAJZAL010000200.1 Protein Homology CDS 23812 24783 . + 0 ID=cds-WP_011880775.1;Parent=gene-LDO38_RS28645;Dbxref=GenBank:WP_011880775.1;Name=WP_011880775.1;Ontology_term=GO:0006508,GO:0046872,GO:0070573;gbkey=CDS;go_function=metal ion binding|0046872||IEA,metallodipeptidase activity|0070573||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017773741.1;locus_tag=LDO38_RS28645;product=dipeptidase;protein_id=WP_011880775.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 24932 25465 . + . ID=gene-LDO38_RS28650;Name=LDO38_RS28650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28650;old_locus_tag=BVI2075_930025 NZ_CAJZAL010000200.1 Protein Homology CDS 24932 25465 . + 0 ID=cds-WP_014723974.1;Parent=gene-LDO38_RS28650;Dbxref=GenBank:WP_014723974.1;Name=WP_014723974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089911.1;locus_tag=LDO38_RS28650;product=DUF5943 domain-containing protein;protein_id=WP_014723974.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 25537 27600 . + . ID=gene-LDO38_RS28655;Name=LDO38_RS28655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28655;old_locus_tag=BVI2075_930026 NZ_CAJZAL010000200.1 Protein Homology CDS 25537 27600 . + 0 ID=cds-WP_069246423.1;Parent=gene-LDO38_RS28655;Dbxref=GenBank:WP_069246423.1;Name=WP_069246423.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186960.1;locus_tag=LDO38_RS28655;product=NADH:flavin oxidoreductase;protein_id=WP_069246423.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 27603 29528 . + . ID=gene-LDO38_RS28660;Name=LDO38_RS28660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28660;old_locus_tag=BVI2075_930027 NZ_CAJZAL010000200.1 Protein Homology CDS 27603 29528 . + 0 ID=cds-WP_069246424.1;Parent=gene-LDO38_RS28660;Dbxref=GenBank:WP_069246424.1;Name=WP_069246424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018315306.1;locus_tag=LDO38_RS28660;product=(Fe-S)-binding protein;protein_id=WP_069246424.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 29533 30720 . + . ID=gene-LDO38_RS28665;Name=LDO38_RS28665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28665;old_locus_tag=BVI2075_930028 NZ_CAJZAL010000200.1 Protein Homology CDS 29533 30720 . + 0 ID=cds-WP_011880771.1;Parent=gene-LDO38_RS28665;Dbxref=GenBank:WP_011880771.1;Name=WP_011880771.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898534.1;locus_tag=LDO38_RS28665;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_011880771.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 30717 31502 . + . ID=gene-LDO38_RS28670;Name=LDO38_RS28670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28670;old_locus_tag=BVI2075_930029 NZ_CAJZAL010000200.1 Protein Homology CDS 30717 31502 . + 0 ID=cds-WP_059462652.1;Parent=gene-LDO38_RS28670;Dbxref=GenBank:WP_059462652.1;Name=WP_059462652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354185.1;locus_tag=LDO38_RS28670;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_059462652.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 31556 32797 . + . ID=gene-LDO38_RS28675;Name=LDO38_RS28675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28675;old_locus_tag=BVI2075_930030 NZ_CAJZAL010000200.1 Protein Homology CDS 31556 32797 . + 0 ID=cds-WP_011880769.1;Parent=gene-LDO38_RS28675;Dbxref=GenBank:WP_011880769.1;Name=WP_011880769.1;Ontology_term=GO:0005506,GO:0016705,GO:0051537;gbkey=CDS;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089906.1;locus_tag=LDO38_RS28675;product=aromatic ring-hydroxylating oxygenase subunit alpha;protein_id=WP_011880769.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 32827 33975 . + . ID=gene-LDO38_RS28680;Name=LDO38_RS28680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28680;old_locus_tag=BVI2075_930031 NZ_CAJZAL010000200.1 Protein Homology CDS 32827 33975 . + 0 ID=cds-WP_011880768.1;Parent=gene-LDO38_RS28680;Dbxref=GenBank:WP_011880768.1;Name=WP_011880768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749542.1;locus_tag=LDO38_RS28680;product=hybrid-cluster NAD(P)-dependent oxidoreductase;protein_id=WP_011880768.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 34111 34974 . + . ID=gene-LDO38_RS28685;Name=LDO38_RS28685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28685;old_locus_tag=BVI2075_930033 NZ_CAJZAL010000200.1 Protein Homology CDS 34111 34974 . + 0 ID=cds-WP_034195493.1;Parent=gene-LDO38_RS28685;Dbxref=GenBank:WP_034195493.1;Name=WP_034195493.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723970.1;locus_tag=LDO38_RS28685;product=glycine betaine ABC transporter substrate-binding protein;protein_id=WP_034195493.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 35210 36865 . + . ID=gene-LDO38_RS28690;Name=LDO38_RS28690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28690;old_locus_tag=BVI2075_930034 NZ_CAJZAL010000200.1 Protein Homology CDS 35210 36865 . + 0 ID=cds-WP_124259673.1;Parent=gene-LDO38_RS28690;Dbxref=GenBank:WP_124259673.1;Name=WP_124259673.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396370.1;locus_tag=LDO38_RS28690;product=APC family permease;protein_id=WP_124259673.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 36927 37811 . - . ID=gene-LDO38_RS28695;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=LDO38_RS28695;old_locus_tag=BVI2075_930035 NZ_CAJZAL010000200.1 Protein Homology CDS 36927 37811 . - 0 ID=cds-WP_059739353.1;Parent=gene-LDO38_RS28695;Dbxref=GenBank:WP_059739353.1;Name=WP_059739353.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723968.1;locus_tag=LDO38_RS28695;product=formyltetrahydrofolate deformylase;protein_id=WP_059739353.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 37993 38919 . - . ID=gene-LDO38_RS28700;Name=LDO38_RS28700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28700;old_locus_tag=BVI2075_930036 NZ_CAJZAL010000200.1 Protein Homology CDS 37993 38919 . - 0 ID=cds-WP_081053484.1;Parent=gene-LDO38_RS28700;Dbxref=GenBank:WP_081053484.1;Name=WP_081053484.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880764.1;locus_tag=LDO38_RS28700;product=choline sulfate utilization transcriptional regulator;protein_id=WP_081053484.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 39119 40654 . + . ID=gene-LDO38_RS28705;Name=betC;gbkey=Gene;gene=betC;gene_biotype=protein_coding;locus_tag=LDO38_RS28705;old_locus_tag=BVI2075_930038 NZ_CAJZAL010000200.1 Protein Homology CDS 39119 40654 . + 0 ID=cds-WP_059897105.1;Parent=gene-LDO38_RS28705;Dbxref=GenBank:WP_059897105.1;Name=WP_059897105.1;Ontology_term=GO:0008484;gbkey=CDS;gene=betC;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756090.1;locus_tag=LDO38_RS28705;product=choline-sulfatase;protein_id=WP_059897105.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 40699 41673 . + . ID=gene-LDO38_RS28710;Name=choX;gbkey=Gene;gene=choX;gene_biotype=protein_coding;locus_tag=LDO38_RS28710;old_locus_tag=BVI2075_930039 NZ_CAJZAL010000200.1 Protein Homology CDS 40699 41673 . + 0 ID=cds-WP_034195489.1;Parent=gene-LDO38_RS28710;Dbxref=GenBank:WP_034195489.1;Name=WP_034195489.1;Ontology_term=GO:0015871,GO:0033265,GO:0042597;gbkey=CDS;gene=choX;go_component=periplasmic space|0042597||IEA;go_function=choline binding|0033265||IEA;go_process=choline transport|0015871||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756091.1;locus_tag=LDO38_RS28710;product=choline ABC transporter substrate-binding protein;protein_id=WP_034195489.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 41926 43065 . + . ID=gene-LDO38_RS28715;Name=LDO38_RS28715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28715;old_locus_tag=BVI2075_930040 NZ_CAJZAL010000200.1 Protein Homology CDS 41926 43065 . + 0 ID=cds-WP_034195488.1;Parent=gene-LDO38_RS28715;Dbxref=GenBank:WP_034195488.1;Name=WP_034195488.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898544.1;locus_tag=LDO38_RS28715;product=porin;protein_id=WP_034195488.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 43323 44573 . + . ID=gene-LDO38_RS28720;Name=LDO38_RS28720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28720;old_locus_tag=BVI2075_930042 NZ_CAJZAL010000200.1 Protein Homology CDS 43323 44573 . + 0 ID=cds-WP_011880760.1;Parent=gene-LDO38_RS28720;Dbxref=GenBank:WP_011880760.1;Name=WP_011880760.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396385.1;locus_tag=LDO38_RS28720;product=MFS transporter;protein_id=WP_011880760.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 44580 44942 . - . ID=gene-LDO38_RS28725;Name=LDO38_RS28725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28725;old_locus_tag=BVI2075_930043 NZ_CAJZAL010000200.1 Protein Homology CDS 44580 44942 . - 0 ID=cds-WP_034195486.1;Parent=gene-LDO38_RS28725;Dbxref=GenBank:WP_034195486.1;Name=WP_034195486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880759.1;locus_tag=LDO38_RS28725;product=YbjQ family protein;protein_id=WP_034195486.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 45076 45990 . - . ID=gene-LDO38_RS28730;Name=LDO38_RS28730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28730;old_locus_tag=BVI2075_930044 NZ_CAJZAL010000200.1 Protein Homology CDS 45076 45990 . - 0 ID=cds-WP_011880758.1;Parent=gene-LDO38_RS28730;Dbxref=GenBank:WP_011880758.1;Name=WP_011880758.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723962.1;locus_tag=LDO38_RS28730;product=LysR family transcriptional regulator;protein_id=WP_011880758.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 46140 47264 . + . ID=gene-LDO38_RS28735;Name=LDO38_RS28735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28735;old_locus_tag=BVI2075_930045 NZ_CAJZAL010000200.1 Protein Homology CDS 46140 47264 . + 0 ID=cds-WP_059739347.1;Parent=gene-LDO38_RS28735;Dbxref=GenBank:WP_059739347.1;Name=WP_059739347.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549246.1;locus_tag=LDO38_RS28735;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_059739347.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 47257 47556 . + . ID=gene-LDO38_RS28740;Name=LDO38_RS28740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28740;old_locus_tag=BVI2075_930046 NZ_CAJZAL010000200.1 Protein Homology CDS 47257 47556 . + 0 ID=cds-WP_045577731.1;Parent=gene-LDO38_RS28740;Dbxref=GenBank:WP_045577731.1;Name=WP_045577731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416919.1;locus_tag=LDO38_RS28740;product=(2Fe-2S)-binding protein;protein_id=WP_045577731.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 47553 48989 . + . ID=gene-LDO38_RS28745;Name=LDO38_RS28745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28745;old_locus_tag=BVI2075_930047 NZ_CAJZAL010000200.1 Protein Homology CDS 47553 48989 . + 0 ID=cds-WP_059889069.1;Parent=gene-LDO38_RS28745;Dbxref=GenBank:WP_059889069.1;Name=WP_059889069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497969.1;locus_tag=LDO38_RS28745;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_059889069.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 49039 49827 . + . ID=gene-LDO38_RS28750;Name=LDO38_RS28750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28750;old_locus_tag=BVI2075_930048 NZ_CAJZAL010000200.1 Protein Homology CDS 49039 49827 . + 0 ID=cds-WP_011880754.1;Parent=gene-LDO38_RS28750;Dbxref=GenBank:WP_011880754.1;Name=WP_011880754.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416946.1;locus_tag=LDO38_RS28750;product=ABC transporter substrate-binding protein;protein_id=WP_011880754.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 49883 50836 . - . ID=gene-LDO38_RS28755;Name=LDO38_RS28755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28755;old_locus_tag=BVI2075_930049 NZ_CAJZAL010000200.1 Protein Homology CDS 49883 50836 . - 0 ID=cds-WP_060091591.1;Parent=gene-LDO38_RS28755;Dbxref=GenBank:WP_060091591.1;Name=WP_060091591.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880753.1;locus_tag=LDO38_RS28755;product=GlxA family transcriptional regulator;protein_id=WP_060091591.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq pseudogene 50959 51057 . - . ID=gene-LDO38_RS28760;Name=LDO38_RS28760;end_range=51057,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS28760;partial=true;pseudo=true;start_range=.,50959 NZ_CAJZAL010000200.1 Protein Homology CDS 50959 51057 . - 0 ID=cds-LDO38_RS28760;Parent=gene-LDO38_RS28760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=51057,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890744.1;locus_tag=LDO38_RS28760;partial=true;product=glycosyltransferase;pseudo=true;start_range=.,50959;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 51206 51970 . - . ID=gene-LDO38_RS28765;Name=LDO38_RS28765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28765;old_locus_tag=BVI2075_930050 NZ_CAJZAL010000200.1 Protein Homology CDS 51206 51970 . - 0 ID=cds-WP_014723959.1;Parent=gene-LDO38_RS28765;Dbxref=GenBank:WP_014723959.1;Name=WP_014723959.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013342584.1;locus_tag=LDO38_RS28765;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_014723959.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 52107 53024 . + . ID=gene-LDO38_RS28770;Name=LDO38_RS28770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28770;old_locus_tag=BVI2075_930051 NZ_CAJZAL010000200.1 Protein Homology CDS 52107 53024 . + 0 ID=cds-WP_059460596.1;Parent=gene-LDO38_RS28770;Dbxref=GenBank:WP_059460596.1;Name=WP_059460596.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012371928.1;locus_tag=LDO38_RS28770;product=LysR family transcriptional regulator;protein_id=WP_059460596.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 53202 54329 . + . ID=gene-LDO38_RS28775;Name=LDO38_RS28775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28775;old_locus_tag=BVI2075_930052 NZ_CAJZAL010000200.1 Protein Homology CDS 53202 54329 . + 0 ID=cds-WP_069240435.1;Parent=gene-LDO38_RS28775;Dbxref=GenBank:WP_069240435.1;Name=WP_069240435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723956.1;locus_tag=LDO38_RS28775;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_069240435.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 54393 56693 . - . ID=gene-LDO38_RS28780;Name=LDO38_RS28780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28780;old_locus_tag=BVI2075_930053 NZ_CAJZAL010000200.1 Protein Homology CDS 54393 56693 . - 0 ID=cds-WP_011880749.1;Parent=gene-LDO38_RS28780;Dbxref=GenBank:WP_011880749.1;Name=WP_011880749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756108.1;locus_tag=LDO38_RS28780;product=NADP-dependent malic enzyme;protein_id=WP_011880749.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 56829 57800 . + . ID=gene-LDO38_RS28785;Name=LDO38_RS28785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28785;old_locus_tag=BVI2075_930054 NZ_CAJZAL010000200.1 Protein Homology CDS 56829 57800 . + 0 ID=cds-WP_034195484.1;Parent=gene-LDO38_RS28785;Dbxref=GenBank:WP_034195484.1;Name=WP_034195484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898561.1;locus_tag=LDO38_RS28785;product=LysR substrate-binding domain-containing protein;protein_id=WP_034195484.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 58065 59018 . + . ID=gene-LDO38_RS28790;Name=LDO38_RS28790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28790;old_locus_tag=BVI2075_930055 NZ_CAJZAL010000200.1 Protein Homology CDS 58065 59018 . + 0 ID=cds-WP_011880747.1;Parent=gene-LDO38_RS28790;Dbxref=GenBank:WP_011880747.1;Name=WP_011880747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017328652.1;locus_tag=LDO38_RS28790;product=choline ABC transporter substrate-binding protein;protein_id=WP_011880747.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 59073 60002 . + . ID=gene-LDO38_RS28795;Name=LDO38_RS28795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28795;old_locus_tag=BVI2075_930056 NZ_CAJZAL010000200.1 Protein Homology CDS 59073 60002 . + 0 ID=cds-WP_059462646.1;Parent=gene-LDO38_RS28795;Dbxref=GenBank:WP_059462646.1;Name=WP_059462646.1;Ontology_term=GO:0019475,GO:0043720,GO:0046872;gbkey=CDS;go_function=3-keto-5-aminohexanoate cleavage activity|0043720||IEA,metal ion binding|0046872||IEA;go_process=L-lysine catabolic process to acetate|0019475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396403.1;locus_tag=LDO38_RS28795;product=3-keto-5-aminohexanoate cleavage protein;protein_id=WP_059462646.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 60093 61058 . + . ID=gene-LDO38_RS28800;Name=LDO38_RS28800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28800;old_locus_tag=BVI2075_930057 NZ_CAJZAL010000200.1 Protein Homology CDS 60093 61058 . + 0 ID=cds-WP_011880745.1;Parent=gene-LDO38_RS28800;Dbxref=GenBank:WP_011880745.1;Name=WP_011880745.1;Ontology_term=GO:0006631,GO:0016616,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484739.1;locus_tag=LDO38_RS28800;product=L-carnitine dehydrogenase;protein_id=WP_011880745.1;transl_table=11 NZ_CAJZAL010000200.1 RefSeq gene 61065 61318 . + . ID=gene-LDO38_RS28805;Name=LDO38_RS28805;end_range=61318,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28805;partial=true NZ_CAJZAL010000200.1 Protein Homology CDS 61065 61318 . + 0 ID=cds-WP_224056757.1;Parent=gene-LDO38_RS28805;Dbxref=GenBank:WP_224056757.1;Name=WP_224056757.1;end_range=61318,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898568.1;locus_tag=LDO38_RS28805;partial=true;product=thioesterase family protein;protein_id=WP_224056757.1;transl_table=11 ##sequence-region NZ_CAJZAL010000201.1 1 14002 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000201.1 RefSeq region 1 14002 . + . ID=NZ_CAJZAL010000201.1:1..14002;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_94 NZ_CAJZAL010000201.1 RefSeq gene 1 551 . - . ID=gene-LDO38_RS28810;Name=LDO38_RS28810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28810;partial=true;start_range=.,1 NZ_CAJZAL010000201.1 Protein Homology CDS 1 551 . - 0 ID=cds-WP_435521000.1;Parent=gene-LDO38_RS28810;Dbxref=GenBank:WP_435521000.1;Name=WP_435521000.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017844185.1;locus_tag=LDO38_RS28810;partial=true;product=glycosyltransferase family 9 protein;protein_id=WP_435521000.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000201.1 RefSeq gene 548 1159 . - . ID=gene-LDO38_RS28815;Name=LDO38_RS28815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28815;old_locus_tag=BVI2075_940002 NZ_CAJZAL010000201.1 Protein Homology CDS 548 1159 . - 0 ID=cds-WP_014725664.1;Parent=gene-LDO38_RS28815;Dbxref=GenBank:WP_014725664.1;Name=WP_014725664.1;Ontology_term=GO:0034200,GO:0046872;gbkey=CDS;go_function=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase activity|0034200||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755683.1;locus_tag=LDO38_RS28815;product=D-glycero-alpha-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase;protein_id=WP_014725664.1;transl_table=11 NZ_CAJZAL010000201.1 RefSeq gene 1150 1899 . - . ID=gene-LDO38_RS28820;Name=LDO38_RS28820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28820;old_locus_tag=BVI2075_940003 NZ_CAJZAL010000201.1 Protein Homology CDS 1150 1899 . - 0 ID=cds-WP_014725663.1;Parent=gene-LDO38_RS28820;Dbxref=GenBank:WP_014725663.1;Name=WP_014725663.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498377.1;locus_tag=LDO38_RS28820;product=SDR family oxidoreductase;protein_id=WP_014725663.1;transl_table=11 NZ_CAJZAL010000201.1 RefSeq gene 2091 2618 . - . ID=gene-LDO38_RS28825;Name=LDO38_RS28825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28825;old_locus_tag=BVI2075_940005 NZ_CAJZAL010000201.1 Protein Homology CDS 2091 2618 . - 0 ID=cds-WP_034192865.1;Parent=gene-LDO38_RS28825;Dbxref=GenBank:WP_034192865.1;Name=WP_034192865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755681.1;locus_tag=LDO38_RS28825;product=hypothetical protein;protein_id=WP_034192865.1;transl_table=11 NZ_CAJZAL010000201.1 RefSeq gene 2560 5238 . - . ID=gene-LDO38_RS28830;Name=LDO38_RS28830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28830;old_locus_tag=BVI2075_940006 NZ_CAJZAL010000201.1 Protein Homology CDS 2560 5238 . - 0 ID=cds-WP_224056760.1;Parent=gene-LDO38_RS28830;Dbxref=GenBank:WP_224056760.1;Name=WP_224056760.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762234.1;locus_tag=LDO38_RS28830;product=ABC transporter transmembrane domain-containing protein;protein_id=WP_224056760.1;transl_table=11 NZ_CAJZAL010000201.1 RefSeq gene 5403 6245 . - . ID=gene-LDO38_RS28835;Name=LDO38_RS28835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28835;old_locus_tag=BVI2075_940007 NZ_CAJZAL010000201.1 Protein Homology CDS 5403 6245 . - 0 ID=cds-WP_014725660.1;Parent=gene-LDO38_RS28835;Dbxref=GenBank:WP_014725660.1;Name=WP_014725660.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725660.1;locus_tag=LDO38_RS28835;product=BON domain-containing protein;protein_id=WP_014725660.1;transl_table=11 NZ_CAJZAL010000201.1 RefSeq gene 6208 6603 . - . ID=gene-LDO38_RS28840;Name=LDO38_RS28840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28840;old_locus_tag=BVI2075_940008 NZ_CAJZAL010000201.1 GeneMarkS-2+ CDS 6208 6603 . - 0 ID=cds-WP_212152945.1;Parent=gene-LDO38_RS28840;Dbxref=GenBank:WP_212152945.1;Name=WP_212152945.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS28840;product=hypothetical protein;protein_id=WP_212152945.1;transl_table=11 NZ_CAJZAL010000201.1 RefSeq gene 6735 7082 . - . ID=gene-LDO38_RS28845;Name=LDO38_RS28845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28845;old_locus_tag=BVI2075_940009 NZ_CAJZAL010000201.1 Protein Homology CDS 6735 7082 . - 0 ID=cds-WP_011879837.1;Parent=gene-LDO38_RS28845;Dbxref=GenBank:WP_011879837.1;Name=WP_011879837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879837.1;locus_tag=LDO38_RS28845;product=hypothetical protein;protein_id=WP_011879837.1;transl_table=11 NZ_CAJZAL010000201.1 RefSeq gene 7339 8928 . + . ID=gene-LDO38_RS28850;Name=LDO38_RS28850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28850;old_locus_tag=BVI2075_940010 NZ_CAJZAL010000201.1 Protein Homology CDS 7339 8928 . + 0 ID=cds-WP_059694072.1;Parent=gene-LDO38_RS28850;Dbxref=GenBank:WP_059694072.1;Name=WP_059694072.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725658.1;locus_tag=LDO38_RS28850;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_059694072.1;transl_table=11 NZ_CAJZAL010000201.1 RefSeq pseudogene 8945 9199 . - . ID=gene-LDO38_RS28855;Name=LDO38_RS28855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS28855;old_locus_tag=BVI2075_940011;partial=true;pseudo=true;start_range=.,8945 NZ_CAJZAL010000201.1 Protein Homology CDS 8945 9199 . - 0 ID=cds-LDO38_RS28855;Parent=gene-LDO38_RS28855;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879835.1;locus_tag=LDO38_RS28855;partial=true;product=four-helix bundle copper-binding protein;pseudo=true;start_range=.,8945;transl_table=11 NZ_CAJZAL010000201.1 RefSeq gene 9229 10434 . - . ID=gene-LDO38_RS28860;Name=LDO38_RS28860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28860;old_locus_tag=BVI2075_940012 NZ_CAJZAL010000201.1 Protein Homology CDS 9229 10434 . - 0 ID=cds-WP_224056758.1;Parent=gene-LDO38_RS28860;Dbxref=GenBank:WP_224056758.1;Name=WP_224056758.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004557884.1;locus_tag=LDO38_RS28860;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_224056758.1;transl_table=11 NZ_CAJZAL010000201.1 RefSeq gene 10650 10895 . - . ID=gene-LDO38_RS28865;Name=LDO38_RS28865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28865;old_locus_tag=BVI2075_940013 NZ_CAJZAL010000201.1 Protein Homology CDS 10650 10895 . - 0 ID=cds-WP_014725654.1;Parent=gene-LDO38_RS28865;Dbxref=GenBank:WP_014725654.1;Name=WP_014725654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725654.1;locus_tag=LDO38_RS28865;product=hypothetical protein;protein_id=WP_014725654.1;transl_table=11 NZ_CAJZAL010000201.1 RefSeq gene 11090 11359 . - . ID=gene-LDO38_RS28870;Name=LDO38_RS28870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28870;old_locus_tag=BVI2075_940014 NZ_CAJZAL010000201.1 Protein Homology CDS 11090 11359 . - 0 ID=cds-WP_014725653.1;Parent=gene-LDO38_RS28870;Dbxref=GenBank:WP_014725653.1;Name=WP_014725653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725653.1;locus_tag=LDO38_RS28870;product=hypothetical protein;protein_id=WP_014725653.1;transl_table=11 NZ_CAJZAL010000201.1 RefSeq gene 11409 11636 . - . ID=gene-LDO38_RS28875;Name=LDO38_RS28875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28875;old_locus_tag=BVI2075_940015 NZ_CAJZAL010000201.1 GeneMarkS-2+ CDS 11409 11636 . - 0 ID=cds-WP_156126941.1;Parent=gene-LDO38_RS28875;Dbxref=GenBank:WP_156126941.1;Name=WP_156126941.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS28875;product=hypothetical protein;protein_id=WP_156126941.1;transl_table=11 NZ_CAJZAL010000201.1 RefSeq gene 11804 12352 . - . ID=gene-LDO38_RS28880;Name=LDO38_RS28880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28880;old_locus_tag=BVI2075_940016 NZ_CAJZAL010000201.1 Protein Homology CDS 11804 12352 . - 0 ID=cds-WP_139164673.1;Parent=gene-LDO38_RS28880;Dbxref=GenBank:WP_139164673.1;Name=WP_139164673.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF013014.6;locus_tag=LDO38_RS28880;product=H-NS histone family protein;protein_id=WP_139164673.1;transl_table=11 NZ_CAJZAL010000201.1 RefSeq gene 12449 13132 . - . ID=gene-LDO38_RS30225;Name=LDO38_RS30225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30225 NZ_CAJZAL010000201.1 Protein Homology CDS 12449 13132 . - 0 ID=cds-WP_014725650.1;Parent=gene-LDO38_RS30225;Dbxref=GenBank:WP_014725650.1;Name=WP_014725650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725650.1;locus_tag=LDO38_RS30225;product=YadA-like family protein;protein_id=WP_014725650.1;transl_table=11 NZ_CAJZAL010000201.1 RefSeq gene 13131 14002 . + . ID=gene-LDO38_RS30230;Name=LDO38_RS30230;end_range=14002,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30230;partial=true NZ_CAJZAL010000201.1 GeneMarkS-2+ CDS 13131 14002 . + 0 ID=cds-WP_354003790.1;Parent=gene-LDO38_RS30230;Dbxref=GenBank:WP_354003790.1;Name=WP_354003790.1;end_range=14002,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30230;partial=true;product=hypothetical protein;protein_id=WP_354003790.1;transl_table=11 ##sequence-region NZ_CAJZAL010000202.1 1 29104 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000202.1 RefSeq region 1 29104 . + . ID=NZ_CAJZAL010000202.1:1..29104;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_95 NZ_CAJZAL010000202.1 RefSeq gene 259 2690 . - . ID=gene-LDO38_RS28890;Name=LDO38_RS28890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28890;old_locus_tag=BVI2075_950002;partial=true;start_range=.,259 NZ_CAJZAL010000202.1 Protein Homology CDS 259 2690 . - 0 ID=cds-WP_435521001.1;Parent=gene-LDO38_RS28890;Dbxref=GenBank:WP_435521001.1;Name=WP_435521001.1;Ontology_term=GO:0008152,GO:0008773;gbkey=CDS;go_function=[protein-PII] uridylyltransferase activity|0008773||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885147.1;locus_tag=LDO38_RS28890;partial=true;product=[protein-PII] uridylyltransferase;protein_id=WP_435521001.1;start_range=.,259;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 2742 3557 . - . ID=gene-LDO38_RS28895;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=LDO38_RS28895;old_locus_tag=BVI2075_950003 NZ_CAJZAL010000202.1 Protein Homology CDS 2742 3557 . - 0 ID=cds-WP_011885146.1;Parent=gene-LDO38_RS28895;Dbxref=GenBank:WP_011885146.1;Name=WP_011885146.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478487.1;locus_tag=LDO38_RS28895;product=type I methionyl aminopeptidase;protein_id=WP_011885146.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 3935 4675 . + . ID=gene-LDO38_RS28900;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=LDO38_RS28900;old_locus_tag=BVI2075_950004 NZ_CAJZAL010000202.1 Protein Homology CDS 3935 4675 . + 0 ID=cds-WP_011885144.1;Parent=gene-LDO38_RS28900;Dbxref=GenBank:WP_011885144.1;Name=WP_011885144.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885144.1;locus_tag=LDO38_RS28900;product=30S ribosomal protein S2;protein_id=WP_011885144.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 4838 5719 . + . ID=gene-LDO38_RS28905;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=LDO38_RS28905;old_locus_tag=BVI2075_950005 NZ_CAJZAL010000202.1 Protein Homology CDS 4838 5719 . + 0 ID=cds-WP_011885143.1;Parent=gene-LDO38_RS28905;Dbxref=GenBank:WP_011885143.1;Name=WP_011885143.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352460.1;locus_tag=LDO38_RS28905;product=translation elongation factor Ts;protein_id=WP_011885143.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 5876 6589 . + . ID=gene-LDO38_RS28910;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=LDO38_RS28910;old_locus_tag=BVI2075_950006 NZ_CAJZAL010000202.1 Protein Homology CDS 5876 6589 . + 0 ID=cds-WP_011885142.1;Parent=gene-LDO38_RS28910;Dbxref=GenBank:WP_011885142.1;Name=WP_011885142.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010104618.1;locus_tag=LDO38_RS28910;product=UMP kinase;protein_id=WP_011885142.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 6692 7252 . + . ID=gene-LDO38_RS28915;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=LDO38_RS28915;old_locus_tag=BVI2075_950007 NZ_CAJZAL010000202.1 Protein Homology CDS 6692 7252 . + 0 ID=cds-WP_011885141.1;Parent=gene-LDO38_RS28915;Dbxref=GenBank:WP_011885141.1;Name=WP_011885141.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192143.1;locus_tag=LDO38_RS28915;product=ribosome recycling factor;protein_id=WP_011885141.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 7302 8084 . + . ID=gene-LDO38_RS28920;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=LDO38_RS28920;old_locus_tag=BVI2075_950008 NZ_CAJZAL010000202.1 Protein Homology CDS 7302 8084 . + 0 ID=cds-WP_011885140.1;Parent=gene-LDO38_RS28920;Dbxref=GenBank:WP_011885140.1;Name=WP_011885140.1;Ontology_term=GO:0009252,GO:0005737;gbkey=CDS;gene=uppS;go_component=cytoplasm|0005737||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092065.1;locus_tag=LDO38_RS28920;product=polyprenyl diphosphate synthase;protein_id=WP_011885140.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 8078 8899 . + . ID=gene-LDO38_RS28925;Name=LDO38_RS28925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28925;old_locus_tag=BVI2075_950009 NZ_CAJZAL010000202.1 Protein Homology CDS 8078 8899 . + 0 ID=cds-WP_014723217.1;Parent=gene-LDO38_RS28925;Dbxref=GenBank:WP_014723217.1;Name=WP_014723217.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896737.1;locus_tag=LDO38_RS28925;product=phosphatidate cytidylyltransferase;protein_id=WP_014723217.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 8915 10111 . + . ID=gene-LDO38_RS28930;Name=LDO38_RS28930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28930;old_locus_tag=BVI2075_950010 NZ_CAJZAL010000202.1 Protein Homology CDS 8915 10111 . + 0 ID=cds-WP_011885138.1;Parent=gene-LDO38_RS28930;Dbxref=GenBank:WP_011885138.1;Name=WP_011885138.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478497.1;locus_tag=LDO38_RS28930;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_011885138.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 10123 11496 . + . ID=gene-LDO38_RS28935;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=LDO38_RS28935;old_locus_tag=BVI2075_950011 NZ_CAJZAL010000202.1 Protein Homology CDS 10123 11496 . + 0 ID=cds-WP_124259628.1;Parent=gene-LDO38_RS28935;Dbxref=GenBank:WP_124259628.1;Name=WP_124259628.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521191.1;locus_tag=LDO38_RS28935;product=RIP metalloprotease RseP;protein_id=WP_124259628.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 11561 13867 . + . ID=gene-LDO38_RS28940;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=LDO38_RS28940;old_locus_tag=BVI2075_950012 NZ_CAJZAL010000202.1 Protein Homology CDS 11561 13867 . + 0 ID=cds-WP_011885136.1;Parent=gene-LDO38_RS28940;Dbxref=GenBank:WP_011885136.1;Name=WP_011885136.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758559.1;locus_tag=LDO38_RS28940;product=outer membrane protein assembly factor BamA;protein_id=WP_011885136.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 13902 14429 . + . ID=gene-LDO38_RS28945;Name=LDO38_RS28945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28945;old_locus_tag=BVI2075_950013 NZ_CAJZAL010000202.1 Protein Homology CDS 13902 14429 . + 0 ID=cds-WP_011885135.1;Parent=gene-LDO38_RS28945;Dbxref=GenBank:WP_011885135.1;Name=WP_011885135.1;Ontology_term=GO:0051082,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=unfolded protein binding|0051082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483811.1;locus_tag=LDO38_RS28945;product=OmpH family outer membrane protein;protein_id=WP_011885135.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 14446 15570 . + . ID=gene-LDO38_RS28950;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=LDO38_RS28950;old_locus_tag=BVI2075_950014 NZ_CAJZAL010000202.1 Protein Homology CDS 14446 15570 . + 0 ID=cds-WP_046426978.1;Parent=gene-LDO38_RS28950;Dbxref=GenBank:WP_046426978.1;Name=WP_046426978.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328756.1;locus_tag=LDO38_RS28950;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_046426978.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 15697 16164 . + . ID=gene-LDO38_RS28955;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=LDO38_RS28955;old_locus_tag=BVI2075_950015 NZ_CAJZAL010000202.1 Protein Homology CDS 15697 16164 . + 0 ID=cds-WP_059461314.1;Parent=gene-LDO38_RS28955;Dbxref=GenBank:WP_059461314.1;Name=WP_059461314.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192266.1;locus_tag=LDO38_RS28955;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_059461314.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 16232 17020 . + . ID=gene-LDO38_RS28960;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=LDO38_RS28960;old_locus_tag=BVI2075_950016 NZ_CAJZAL010000202.1 Protein Homology CDS 16232 17020 . + 0 ID=cds-WP_046426975.1;Parent=gene-LDO38_RS28960;Dbxref=GenBank:WP_046426975.1;Name=WP_046426975.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193051.1;locus_tag=LDO38_RS28960;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_046426975.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 17024 18193 . + . ID=gene-LDO38_RS28965;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=LDO38_RS28965;old_locus_tag=BVI2075_950017 NZ_CAJZAL010000202.1 Protein Homology CDS 17024 18193 . + 0 ID=cds-WP_011885132.1;Parent=gene-LDO38_RS28965;Dbxref=GenBank:WP_011885132.1;Name=WP_011885132.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213142.1;locus_tag=LDO38_RS28965;product=lipid-A-disaccharide synthase;protein_id=WP_011885132.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 18190 18840 . + . ID=gene-LDO38_RS28970;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=LDO38_RS28970;old_locus_tag=BVI2075_950018 NZ_CAJZAL010000202.1 Protein Homology CDS 18190 18840 . + 0 ID=cds-WP_011885131.1;Parent=gene-LDO38_RS28970;Dbxref=GenBank:WP_011885131.1;Name=WP_011885131.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885131.1;locus_tag=LDO38_RS28970;product=ribonuclease HII;protein_id=WP_011885131.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 18837 19619 . + . ID=gene-LDO38_RS28975;Name=LDO38_RS28975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28975;old_locus_tag=BVI2075_950019 NZ_CAJZAL010000202.1 Protein Homology CDS 18837 19619 . + 0 ID=cds-WP_059461313.1;Parent=gene-LDO38_RS28975;Dbxref=GenBank:WP_059461313.1;Name=WP_059461313.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723209.1;locus_tag=LDO38_RS28975;product=TrmH family RNA methyltransferase;protein_id=WP_059461313.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 19732 20547 . - . ID=gene-LDO38_RS28980;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=LDO38_RS28980;old_locus_tag=BVI2075_950020 NZ_CAJZAL010000202.1 Protein Homology CDS 19732 20547 . - 0 ID=cds-WP_011885129.1;Parent=gene-LDO38_RS28980;Dbxref=GenBank:WP_011885129.1;Name=WP_011885129.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010104596.1;locus_tag=LDO38_RS28980;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_011885129.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 20924 23323 . + . ID=gene-LDO38_RS28985;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=LDO38_RS28985;old_locus_tag=BVI2075_950021 NZ_CAJZAL010000202.1 Protein Homology CDS 20924 23323 . + 0 ID=cds-WP_011885128.1;Parent=gene-LDO38_RS28985;Dbxref=GenBank:WP_011885128.1;Name=WP_011885128.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026079.1;locus_tag=LDO38_RS28985;product=phosphoenolpyruvate synthase;protein_id=WP_011885128.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 23530 23964 . + . ID=gene-LDO38_RS28990;Name=LDO38_RS28990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28990;old_locus_tag=BVI2075_950022 NZ_CAJZAL010000202.1 Protein Homology CDS 23530 23964 . + 0 ID=cds-WP_011885127.1;Parent=gene-LDO38_RS28990;Dbxref=GenBank:WP_011885127.1;Name=WP_011885127.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478509.1;locus_tag=LDO38_RS28990;product=NfeD family protein;protein_id=WP_011885127.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 23998 24933 . + . ID=gene-LDO38_RS28995;Name=LDO38_RS28995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS28995;old_locus_tag=BVI2075_950023 NZ_CAJZAL010000202.1 Protein Homology CDS 23998 24933 . + 0 ID=cds-WP_011885126.1;Parent=gene-LDO38_RS28995;Dbxref=GenBank:WP_011885126.1;Name=WP_011885126.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758549.1;locus_tag=LDO38_RS28995;product=SPFH domain-containing protein;protein_id=WP_011885126.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 25150 25596 . - . ID=gene-LDO38_RS29000;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=LDO38_RS29000;old_locus_tag=BVI2075_950024 NZ_CAJZAL010000202.1 Protein Homology CDS 25150 25596 . - 0 ID=cds-WP_006478511.1;Parent=gene-LDO38_RS29000;Dbxref=GenBank:WP_006478511.1;Name=WP_006478511.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193190.1;locus_tag=LDO38_RS29000;product=SsrA-binding protein SmpB;protein_id=WP_006478511.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 25695 26132 . + . ID=gene-LDO38_RS29005;Name=LDO38_RS29005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29005;old_locus_tag=BVI2075_950025 NZ_CAJZAL010000202.1 Protein Homology CDS 25695 26132 . + 0 ID=cds-WP_011885125.1;Parent=gene-LDO38_RS29005;Dbxref=GenBank:WP_011885125.1;Name=WP_011885125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904866.1;locus_tag=LDO38_RS29005;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_011885125.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 26137 26460 . + . ID=gene-LDO38_RS29010;Name=LDO38_RS29010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29010;old_locus_tag=BVI2075_950026 NZ_CAJZAL010000202.1 Protein Homology CDS 26137 26460 . + 0 ID=cds-WP_011885124.1;Parent=gene-LDO38_RS29010;Dbxref=GenBank:WP_011885124.1;Name=WP_011885124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890481.1;locus_tag=LDO38_RS29010;product=RnfH family protein;protein_id=WP_011885124.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 26546 27529 . - . ID=gene-LDO38_RS29015;Name=LDO38_RS29015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29015;old_locus_tag=BVI2075_950027 NZ_CAJZAL010000202.1 Protein Homology CDS 26546 27529 . - 0 ID=cds-WP_034195316.1;Parent=gene-LDO38_RS29015;Dbxref=GenBank:WP_034195316.1;Name=WP_034195316.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723206.1;locus_tag=LDO38_RS29015;product=DMT family transporter;protein_id=WP_034195316.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq gene 27656 28342 . - . ID=gene-LDO38_RS29020;Name=LDO38_RS29020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29020;old_locus_tag=BVI2075_950028 NZ_CAJZAL010000202.1 Protein Homology CDS 27656 28342 . - 0 ID=cds-WP_011885122.1;Parent=gene-LDO38_RS29020;Dbxref=GenBank:WP_011885122.1;Name=WP_011885122.1;Ontology_term=GO:0000287,GO:0005515,GO:0016835;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,protein binding|0005515||IEA,carbon-oxygen lyase activity|0016835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885122.1;locus_tag=LDO38_RS29020;product=Vgb family protein;protein_id=WP_011885122.1;transl_table=11 NZ_CAJZAL010000202.1 RefSeq pseudogene 28373 29104 . - . ID=gene-LDO38_RS29025;Name=LDO38_RS29025;end_range=29104,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS29025;old_locus_tag=BVI2075_950029;partial=true;pseudo=true NZ_CAJZAL010000202.1 Protein Homology CDS 28373 29104 . - 0 ID=cds-LDO38_RS29025;Parent=gene-LDO38_RS29025;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=29104,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495565.1;locus_tag=LDO38_RS29025;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAL010000203.1 1 95915 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000203.1 RefSeq region 1 95915 . + . ID=NZ_CAJZAL010000203.1:1..95915;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_96 NZ_CAJZAL010000203.1 RefSeq gene 1 1780 . + . ID=gene-LDO38_RS29030;Name=LDO38_RS29030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29030;old_locus_tag=BVI2075_960001;partial=true;start_range=.,1 NZ_CAJZAL010000203.1 Protein Homology CDS 1 1780 . + 1 ID=cds-WP_224056761.1;Parent=gene-LDO38_RS29030;Dbxref=GenBank:WP_224056761.1;Name=WP_224056761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875471.1;locus_tag=LDO38_RS29030;partial=true;product=phage integrase family protein;protein_id=WP_224056761.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 2341 3024 . + . ID=gene-LDO38_RS29035;Name=parA;gbkey=Gene;gene=parA;gene_biotype=protein_coding;locus_tag=LDO38_RS29035;old_locus_tag=BVI2075_960004 NZ_CAJZAL010000203.1 Protein Homology CDS 2341 3024 . + 0 ID=cds-WP_011875473.1;Parent=gene-LDO38_RS29035;Dbxref=GenBank:WP_011875473.1;Name=WP_011875473.1;gbkey=CDS;gene=parA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875473.1;locus_tag=LDO38_RS29035;product=ParA family partition ATPase;protein_id=WP_011875473.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 3021 4091 . + . ID=gene-LDO38_RS29040;Name=LDO38_RS29040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29040;old_locus_tag=BVI2075_960005 NZ_CAJZAL010000203.1 Protein Homology CDS 3021 4091 . + 0 ID=cds-WP_059475365.1;Parent=gene-LDO38_RS29040;Dbxref=GenBank:WP_059475365.1;Name=WP_059475365.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875474.1;locus_tag=LDO38_RS29040;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_059475365.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 4490 5110 . + . ID=gene-LDO38_RS29045;Name=LDO38_RS29045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29045;old_locus_tag=BVI2075_960006 NZ_CAJZAL010000203.1 Protein Homology CDS 4490 5110 . + 0 ID=cds-WP_059475364.1;Parent=gene-LDO38_RS29045;Dbxref=GenBank:WP_059475364.1;Name=WP_059475364.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349322.1;locus_tag=LDO38_RS29045;product=HAD family hydrolase;protein_id=WP_059475364.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 5606 6631 . - . ID=gene-LDO38_RS29050;Name=LDO38_RS29050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29050;old_locus_tag=BVI2075_960008 NZ_CAJZAL010000203.1 Protein Homology CDS 5606 6631 . - 0 ID=cds-WP_059475363.1;Parent=gene-LDO38_RS29050;Dbxref=GenBank:WP_059475363.1;Name=WP_059475363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019572426.1;locus_tag=LDO38_RS29050;product=carbon-nitrogen hydrolase family protein;protein_id=WP_059475363.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 6712 7503 . - . ID=gene-LDO38_RS29055;Name=LDO38_RS29055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29055;old_locus_tag=BVI2075_960009 NZ_CAJZAL010000203.1 Protein Homology CDS 6712 7503 . - 0 ID=cds-WP_059475362.1;Parent=gene-LDO38_RS29055;Dbxref=GenBank:WP_059475362.1;Name=WP_059475362.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489005.1;locus_tag=LDO38_RS29055;product=MBL fold metallo-hydrolase;protein_id=WP_059475362.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 7551 8714 . - . ID=gene-LDO38_RS29060;Name=LDO38_RS29060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29060;old_locus_tag=BVI2075_960010 NZ_CAJZAL010000203.1 Protein Homology CDS 7551 8714 . - 0 ID=cds-WP_059475361.1;Parent=gene-LDO38_RS29060;Dbxref=GenBank:WP_059475361.1;Name=WP_059475361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012761813.1;locus_tag=LDO38_RS29060;product=alpha/beta fold hydrolase;protein_id=WP_059475361.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 8828 9745 . + . ID=gene-LDO38_RS29065;Name=LDO38_RS29065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29065 NZ_CAJZAL010000203.1 Protein Homology CDS 8828 9745 . + 0 ID=cds-WP_059475360.1;Parent=gene-LDO38_RS29065;Dbxref=GenBank:WP_059475360.1;Name=WP_059475360.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012432127.1;locus_tag=LDO38_RS29065;product=LysR family transcriptional regulator;protein_id=WP_059475360.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 10316 10798 . - . ID=gene-LDO38_RS29070;Name=LDO38_RS29070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29070;old_locus_tag=BVI2075_960012 NZ_CAJZAL010000203.1 GeneMarkS-2+ CDS 10316 10798 . - 0 ID=cds-WP_059475359.1;Parent=gene-LDO38_RS29070;Dbxref=GenBank:WP_059475359.1;Name=WP_059475359.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS29070;product=hypothetical protein;protein_id=WP_059475359.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 10996 11877 . - . ID=gene-LDO38_RS29075;Name=LDO38_RS29075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29075;old_locus_tag=BVI2075_960015 NZ_CAJZAL010000203.1 Protein Homology CDS 10996 11877 . - 0 ID=cds-WP_059475358.1;Parent=gene-LDO38_RS29075;Dbxref=GenBank:WP_059475358.1;Name=WP_059475358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752810.1;locus_tag=LDO38_RS29075;product=replication initiation protein;protein_id=WP_059475358.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 13657 14373 . + . ID=gene-LDO38_RS29080;Name=LDO38_RS29080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29080;old_locus_tag=BVI2075_960024 NZ_CAJZAL010000203.1 Protein Homology CDS 13657 14373 . + 0 ID=cds-WP_059475357.1;Parent=gene-LDO38_RS29080;Dbxref=GenBank:WP_059475357.1;Name=WP_059475357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217946.1;locus_tag=LDO38_RS29080;product=type IV secretion system protein;protein_id=WP_059475357.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 14370 15245 . + . ID=gene-LDO38_RS29085;Name=LDO38_RS29085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29085;old_locus_tag=BVI2075_960025 NZ_CAJZAL010000203.1 Protein Homology CDS 14370 15245 . + 0 ID=cds-WP_059475356.1;Parent=gene-LDO38_RS29085;Dbxref=GenBank:WP_059475356.1;Name=WP_059475356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699976.1;locus_tag=LDO38_RS29085;product=TrbG/VirB9 family P-type conjugative transfer protein;protein_id=WP_059475356.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 15254 16516 . + . ID=gene-LDO38_RS29090;Name=LDO38_RS29090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29090;old_locus_tag=BVI2075_960026 NZ_CAJZAL010000203.1 Protein Homology CDS 15254 16516 . + 0 ID=cds-WP_059475355.1;Parent=gene-LDO38_RS29090;Dbxref=GenBank:WP_059475355.1;Name=WP_059475355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367228.1;locus_tag=LDO38_RS29090;product=TrbI/VirB10 family protein;protein_id=WP_059475355.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 16509 17315 . + . ID=gene-LDO38_RS29095;Name=LDO38_RS29095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29095;old_locus_tag=BVI2075_960027 NZ_CAJZAL010000203.1 Protein Homology CDS 16509 17315 . + 0 ID=cds-WP_059475354.1;Parent=gene-LDO38_RS29095;Dbxref=GenBank:WP_059475354.1;Name=WP_059475354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367227.1;locus_tag=LDO38_RS29095;product=transglycosylase SLT domain-containing protein;protein_id=WP_059475354.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 17312 18592 . + . ID=gene-LDO38_RS29100;Name=LDO38_RS29100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29100;old_locus_tag=BVI2075_960028 NZ_CAJZAL010000203.1 Protein Homology CDS 17312 18592 . + 0 ID=cds-WP_059475353.1;Parent=gene-LDO38_RS29100;Dbxref=GenBank:WP_059475353.1;Name=WP_059475353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094410.1;locus_tag=LDO38_RS29100;product=TrbG/VirB9 family P-type conjugative transfer protein;protein_id=WP_059475353.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 18589 19014 . + . ID=gene-LDO38_RS29105;Name=LDO38_RS29105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29105;old_locus_tag=BVI2075_960029 NZ_CAJZAL010000203.1 Protein Homology CDS 18589 19014 . + 0 ID=cds-WP_059475352.1;Parent=gene-LDO38_RS29105;Dbxref=GenBank:WP_059475352.1;Name=WP_059475352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007588642.1;locus_tag=LDO38_RS29105;product=lytic transglycosylase domain-containing protein;protein_id=WP_059475352.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 19017 19565 . + . ID=gene-LDO38_RS29110;Name=LDO38_RS29110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29110;old_locus_tag=BVI2075_960030 NZ_CAJZAL010000203.1 Protein Homology CDS 19017 19565 . + 0 ID=cds-WP_059475351.1;Parent=gene-LDO38_RS29110;Dbxref=GenBank:WP_059475351.1;Name=WP_059475351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094408.1;locus_tag=LDO38_RS29110;product=toxin co-regulated pilus biosynthesis Q family protein;protein_id=WP_059475351.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 19571 21184 . + . ID=gene-LDO38_RS29115;Name=LDO38_RS29115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29115;old_locus_tag=BVI2075_960031 NZ_CAJZAL010000203.1 Protein Homology CDS 19571 21184 . + 0 ID=cds-WP_059475350.1;Parent=gene-LDO38_RS29115;Dbxref=GenBank:WP_059475350.1;Name=WP_059475350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875484.1;locus_tag=LDO38_RS29115;product=hypothetical protein;protein_id=WP_059475350.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 21189 22520 . + . ID=gene-LDO38_RS29120;Name=LDO38_RS29120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29120;old_locus_tag=BVI2075_960032 NZ_CAJZAL010000203.1 Protein Homology CDS 21189 22520 . + 0 ID=cds-WP_059475349.1;Parent=gene-LDO38_RS29120;Dbxref=GenBank:WP_059475349.1;Name=WP_059475349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217954.1;locus_tag=LDO38_RS29120;product=type 4b pilus protein PilO2;protein_id=WP_059475349.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 22507 23091 . + . ID=gene-LDO38_RS29125;Name=LDO38_RS29125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29125;old_locus_tag=BVI2075_960033 NZ_CAJZAL010000203.1 Protein Homology CDS 22507 23091 . + 0 ID=cds-WP_059475348.1;Parent=gene-LDO38_RS29125;Dbxref=GenBank:WP_059475348.1;Name=WP_059475348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699984.1;locus_tag=LDO38_RS29125;product=hypothetical protein;protein_id=WP_059475348.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 23088 25337 . + . ID=gene-LDO38_RS29130;Name=LDO38_RS29130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29130;old_locus_tag=BVI2075_960034 NZ_CAJZAL010000203.1 Protein Homology CDS 23088 25337 . + 0 ID=cds-WP_059475347.1;Parent=gene-LDO38_RS29130;Dbxref=GenBank:WP_059475347.1;Name=WP_059475347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760239.1;locus_tag=LDO38_RS29130;product=ATPase%2C T2SS/T4P/T4SS family;protein_id=WP_059475347.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 25334 26464 . + . ID=gene-LDO38_RS29135;Name=LDO38_RS29135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29135;old_locus_tag=BVI2075_960035 NZ_CAJZAL010000203.1 Protein Homology CDS 25334 26464 . + 0 ID=cds-WP_059475346.1;Parent=gene-LDO38_RS29135;Dbxref=GenBank:WP_059475346.1;Name=WP_059475346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217957.1;locus_tag=LDO38_RS29135;product=hypothetical protein;protein_id=WP_059475346.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 26473 27066 . + . ID=gene-LDO38_RS29140;Name=LDO38_RS29140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29140;old_locus_tag=BVI2075_960036 NZ_CAJZAL010000203.1 Protein Homology CDS 26473 27066 . + 0 ID=cds-WP_059475345.1;Parent=gene-LDO38_RS29140;Dbxref=GenBank:WP_059475345.1;Name=WP_059475345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018432859.1;locus_tag=LDO38_RS29140;product=type 4 pilus major pilin;protein_id=WP_059475345.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 27075 28280 . + . ID=gene-LDO38_RS29145;Name=LDO38_RS29145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29145;old_locus_tag=BVI2075_960037 NZ_CAJZAL010000203.1 Protein Homology CDS 27075 28280 . + 0 ID=cds-WP_059475344.1;Parent=gene-LDO38_RS29145;Dbxref=GenBank:WP_059475344.1;Name=WP_059475344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217959.1;locus_tag=LDO38_RS29145;product=hypothetical protein;protein_id=WP_059475344.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 29159 30163 . - . ID=gene-LDO38_RS29150;Name=LDO38_RS29150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29150;old_locus_tag=BVI2075_960040 NZ_CAJZAL010000203.1 Protein Homology CDS 29159 30163 . - 0 ID=cds-WP_060081638.1;Parent=gene-LDO38_RS29150;Dbxref=GenBank:WP_060081638.1;Name=WP_060081638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094399.1;locus_tag=LDO38_RS29150;product=CAP domain-containing protein;protein_id=WP_060081638.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 30381 30743 . - . ID=gene-LDO38_RS29155;Name=LDO38_RS29155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29155;old_locus_tag=BVI2075_960041 NZ_CAJZAL010000203.1 Protein Homology CDS 30381 30743 . - 0 ID=cds-WP_059475343.1;Parent=gene-LDO38_RS29155;Dbxref=GenBank:WP_059475343.1;Name=WP_059475343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217963.1;locus_tag=LDO38_RS29155;product=hypothetical protein;protein_id=WP_059475343.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 30753 30932 . - . ID=gene-LDO38_RS29160;Name=LDO38_RS29160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29160;old_locus_tag=BVI2075_960042 NZ_CAJZAL010000203.1 Protein Homology CDS 30753 30932 . - 0 ID=cds-WP_081056129.1;Parent=gene-LDO38_RS29160;Dbxref=GenBank:WP_081056129.1;Name=WP_081056129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367212.1;locus_tag=LDO38_RS29160;product=hypothetical protein;protein_id=WP_081056129.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 30919 32121 . - . ID=gene-LDO38_RS29165;Name=LDO38_RS29165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29165;old_locus_tag=BVI2075_960043 NZ_CAJZAL010000203.1 Protein Homology CDS 30919 32121 . - 0 ID=cds-WP_059475342.1;Parent=gene-LDO38_RS29165;Dbxref=GenBank:WP_059475342.1;Name=WP_059475342.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875494.1;locus_tag=LDO38_RS29165;product=FlhC family transcriptional regulator;protein_id=WP_059475342.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 32175 33428 . - . ID=gene-LDO38_RS29170;Name=LDO38_RS29170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29170;old_locus_tag=BVI2075_960044 NZ_CAJZAL010000203.1 Protein Homology CDS 32175 33428 . - 0 ID=cds-WP_059475341.1;Parent=gene-LDO38_RS29170;Dbxref=GenBank:WP_059475341.1;Name=WP_059475341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367210.1;locus_tag=LDO38_RS29170;product=hypothetical protein;protein_id=WP_059475341.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 33441 33899 . - . ID=gene-LDO38_RS29175;Name=LDO38_RS29175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29175;old_locus_tag=BVI2075_960045 NZ_CAJZAL010000203.1 GeneMarkS-2+ CDS 33441 33899 . - 0 ID=cds-WP_155625232.1;Parent=gene-LDO38_RS29175;Dbxref=GenBank:WP_155625232.1;Name=WP_155625232.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS29175;product=hypothetical protein;protein_id=WP_155625232.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 34110 34811 . - . ID=gene-LDO38_RS29180;Name=LDO38_RS29180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29180;old_locus_tag=BVI2075_960046 NZ_CAJZAL010000203.1 Protein Homology CDS 34110 34811 . - 0 ID=cds-WP_224056762.1;Parent=gene-LDO38_RS29180;Dbxref=GenBank:WP_224056762.1;Name=WP_224056762.1;Ontology_term=GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217967.1;locus_tag=LDO38_RS29180;product=nuclease-related domain-containing protein;protein_id=WP_224056762.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 35287 35610 . + . ID=gene-LDO38_RS29185;Name=LDO38_RS29185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29185;old_locus_tag=BVI2075_960047 NZ_CAJZAL010000203.1 Protein Homology CDS 35287 35610 . + 0 ID=cds-WP_059475339.1;Parent=gene-LDO38_RS29185;Dbxref=GenBank:WP_059475339.1;Name=WP_059475339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367207.1;locus_tag=LDO38_RS29185;product=hypothetical protein;protein_id=WP_059475339.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 35732 36160 . + . ID=gene-LDO38_RS29190;Name=LDO38_RS29190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29190;old_locus_tag=BVI2075_960048 NZ_CAJZAL010000203.1 Protein Homology CDS 35732 36160 . + 0 ID=cds-WP_059475338.1;Parent=gene-LDO38_RS29190;Dbxref=GenBank:WP_059475338.1;Name=WP_059475338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008649407.1;locus_tag=LDO38_RS29190;product=hypothetical protein;protein_id=WP_059475338.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 36169 36942 . + . ID=gene-LDO38_RS29195;Name=LDO38_RS29195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29195;old_locus_tag=BVI2075_960049 NZ_CAJZAL010000203.1 Protein Homology CDS 36169 36942 . + 0 ID=cds-WP_059475337.1;Parent=gene-LDO38_RS29195;Dbxref=GenBank:WP_059475337.1;Name=WP_059475337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018432871.1;locus_tag=LDO38_RS29195;product=hypothetical protein;protein_id=WP_059475337.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 36954 37541 . + . ID=gene-LDO38_RS29200;Name=LDO38_RS29200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29200;old_locus_tag=BVI2075_960050 NZ_CAJZAL010000203.1 Protein Homology CDS 36954 37541 . + 0 ID=cds-WP_059475368.1;Parent=gene-LDO38_RS29200;Dbxref=GenBank:WP_059475368.1;Name=WP_059475368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875501.1;locus_tag=LDO38_RS29200;product=single-stranded DNA-binding protein;protein_id=WP_059475368.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 37757 38857 . + . ID=gene-LDO38_RS29205;Name=LDO38_RS29205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29205;old_locus_tag=BVI2075_960051 NZ_CAJZAL010000203.1 Protein Homology CDS 37757 38857 . + 0 ID=cds-WP_059475336.1;Parent=gene-LDO38_RS29205;Dbxref=GenBank:WP_059475336.1;Name=WP_059475336.1;Ontology_term=GO:0003899,GO:0004386,GO:0008270;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA,helicase activity|0004386||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008343126.1;locus_tag=LDO38_RS29205;product=primase-helicase zinc-binding domain-containing protein;protein_id=WP_059475336.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 38957 39181 . + . ID=gene-LDO38_RS29210;Name=LDO38_RS29210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29210;old_locus_tag=BVI2075_960052 NZ_CAJZAL010000203.1 Protein Homology CDS 38957 39181 . + 0 ID=cds-WP_059475335.1;Parent=gene-LDO38_RS29210;Dbxref=GenBank:WP_059475335.1;Name=WP_059475335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700002.1;locus_tag=LDO38_RS29210;product=hypothetical protein;protein_id=WP_059475335.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 39603 40973 . + . ID=gene-LDO38_RS29215;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=LDO38_RS29215;old_locus_tag=BVI2075_960053 NZ_CAJZAL010000203.1 Protein Homology CDS 39603 40973 . + 0 ID=cds-WP_059462730.1;Parent=gene-LDO38_RS29215;Dbxref=GenBank:WP_059462730.1;Name=WP_059462730.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880651.1;locus_tag=LDO38_RS29215;product=group II intron reverse transcriptase/maturase;protein_id=WP_059462730.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 41069 41335 . - . ID=gene-LDO38_RS29220;Name=LDO38_RS29220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29220;old_locus_tag=BVI2075_960054 NZ_CAJZAL010000203.1 GeneMarkS-2+ CDS 41069 41335 . - 0 ID=cds-WP_059475079.1;Parent=gene-LDO38_RS29220;Dbxref=GenBank:WP_059475079.1;Name=WP_059475079.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS29220;product=hypothetical protein;protein_id=WP_059475079.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 41332 41484 . - . ID=gene-LDO38_RS29225;Name=LDO38_RS29225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29225;old_locus_tag=BVI2075_960055 NZ_CAJZAL010000203.1 Protein Homology CDS 41332 41484 . - 0 ID=cds-WP_196480886.1;Parent=gene-LDO38_RS29225;Dbxref=GenBank:WP_196480886.1;Name=WP_196480886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217974.1;locus_tag=LDO38_RS29225;product=hypothetical protein;protein_id=WP_196480886.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 41581 41928 . - . ID=gene-LDO38_RS29230;Name=LDO38_RS29230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29230;old_locus_tag=BVI2075_960056 NZ_CAJZAL010000203.1 GeneMarkS-2+ CDS 41581 41928 . - 0 ID=cds-WP_059475081.1;Parent=gene-LDO38_RS29230;Dbxref=GenBank:WP_059475081.1;Name=WP_059475081.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS29230;product=hypothetical protein;protein_id=WP_059475081.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 41925 42947 . - . ID=gene-LDO38_RS29235;Name=LDO38_RS29235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29235;old_locus_tag=BVI2075_960057 NZ_CAJZAL010000203.1 Protein Homology CDS 41925 42947 . - 0 ID=cds-WP_059475082.1;Parent=gene-LDO38_RS29235;Dbxref=GenBank:WP_059475082.1;Name=WP_059475082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007585628.1;locus_tag=LDO38_RS29235;product=PRTRC system protein D;protein_id=WP_059475082.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 44059 45207 . + . ID=gene-LDO38_RS29240;Name=LDO38_RS29240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29240;old_locus_tag=BVI2075_960058 NZ_CAJZAL010000203.1 Protein Homology CDS 44059 45207 . + 0 ID=cds-WP_059475083.1;Parent=gene-LDO38_RS29240;Dbxref=GenBank:WP_059475083.1;Name=WP_059475083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700007.1;locus_tag=LDO38_RS29240;product=integrase domain-containing protein;protein_id=WP_059475083.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 45422 46093 . - . ID=gene-LDO38_RS29245;Name=LDO38_RS29245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29245;old_locus_tag=BVI2075_960059 NZ_CAJZAL010000203.1 Protein Homology CDS 45422 46093 . - 0 ID=cds-WP_059475084.1;Parent=gene-LDO38_RS29245;Dbxref=GenBank:WP_059475084.1;Name=WP_059475084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094774.1;locus_tag=LDO38_RS29245;product=Lar family restriction alleviation protein;protein_id=WP_059475084.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 46213 46653 . - . ID=gene-LDO38_RS29250;Name=LDO38_RS29250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29250;old_locus_tag=BVI2075_960061 NZ_CAJZAL010000203.1 Protein Homology CDS 46213 46653 . - 0 ID=cds-WP_059475085.1;Parent=gene-LDO38_RS29250;Dbxref=GenBank:WP_059475085.1;Name=WP_059475085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367195.1;locus_tag=LDO38_RS29250;product=hypothetical protein;protein_id=WP_059475085.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 47148 48107 . + . ID=gene-LDO38_RS29255;Name=LDO38_RS29255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29255;old_locus_tag=BVI2075_960063 NZ_CAJZAL010000203.1 Protein Homology CDS 47148 48107 . + 0 ID=cds-WP_059475086.1;Parent=gene-LDO38_RS29255;Dbxref=GenBank:WP_059475086.1;Name=WP_059475086.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367190.1;locus_tag=LDO38_RS29255;product=N-6 DNA methylase;protein_id=WP_059475086.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 48339 50015 . + . ID=gene-LDO38_RS29260;Name=LDO38_RS29260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29260;old_locus_tag=BVI2075_960064 NZ_CAJZAL010000203.1 Protein Homology CDS 48339 50015 . + 0 ID=cds-WP_081056111.1;Parent=gene-LDO38_RS29260;Dbxref=GenBank:WP_081056111.1;Name=WP_081056111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367189.1;locus_tag=LDO38_RS29260;product=PRTRC system ParB family protein;protein_id=WP_081056111.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 50100 50546 . + . ID=gene-LDO38_RS29265;Name=LDO38_RS29265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29265;old_locus_tag=BVI2075_960065 NZ_CAJZAL010000203.1 Protein Homology CDS 50100 50546 . + 0 ID=cds-WP_059475087.1;Parent=gene-LDO38_RS29265;Dbxref=GenBank:WP_059475087.1;Name=WP_059475087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367188.1;locus_tag=LDO38_RS29265;product=PRTRC system protein E;protein_id=WP_059475087.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 50558 50776 . + . ID=gene-LDO38_RS29270;Name=LDO38_RS29270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29270;old_locus_tag=BVI2075_960066 NZ_CAJZAL010000203.1 Protein Homology CDS 50558 50776 . + 0 ID=cds-WP_059475088.1;Parent=gene-LDO38_RS29270;Dbxref=GenBank:WP_059475088.1;Name=WP_059475088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217989.1;locus_tag=LDO38_RS29270;product=PRTRC system protein C;protein_id=WP_059475088.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 50876 52018 . + . ID=gene-LDO38_RS29275;Name=LDO38_RS29275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29275;old_locus_tag=BVI2075_960068 NZ_CAJZAL010000203.1 Protein Homology CDS 50876 52018 . + 0 ID=cds-WP_059475089.1;Parent=gene-LDO38_RS29275;Dbxref=GenBank:WP_059475089.1;Name=WP_059475089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217990.1;locus_tag=LDO38_RS29275;product=PRTRC system protein F;protein_id=WP_059475089.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 52030 52758 . + . ID=gene-LDO38_RS29280;Name=LDO38_RS29280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29280;old_locus_tag=BVI2075_960069 NZ_CAJZAL010000203.1 Protein Homology CDS 52030 52758 . + 0 ID=cds-WP_059475090.1;Parent=gene-LDO38_RS29280;Dbxref=GenBank:WP_059475090.1;Name=WP_059475090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875518.1;locus_tag=LDO38_RS29280;product=PRTRC system protein B;protein_id=WP_059475090.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 52755 53393 . + . ID=gene-LDO38_RS29285;Name=LDO38_RS29285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29285;old_locus_tag=BVI2075_960070 NZ_CAJZAL010000203.1 Protein Homology CDS 52755 53393 . + 0 ID=cds-WP_059475091.1;Parent=gene-LDO38_RS29285;Dbxref=GenBank:WP_059475091.1;Name=WP_059475091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367184.1;locus_tag=LDO38_RS29285;product=PRTRC system protein A;protein_id=WP_059475091.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 53390 54208 . + . ID=gene-LDO38_RS29290;Name=LDO38_RS29290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29290;old_locus_tag=BVI2075_960071 NZ_CAJZAL010000203.1 Protein Homology CDS 53390 54208 . + 0 ID=cds-WP_059475092.1;Parent=gene-LDO38_RS29290;Dbxref=GenBank:WP_059475092.1;Name=WP_059475092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875520.1;locus_tag=LDO38_RS29290;product=PRTRC system ThiF family protein;protein_id=WP_059475092.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 54307 54762 . + . ID=gene-LDO38_RS29295;Name=LDO38_RS29295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29295;old_locus_tag=BVI2075_960072 NZ_CAJZAL010000203.1 GeneMarkS-2+ CDS 54307 54762 . + 0 ID=cds-WP_059475093.1;Parent=gene-LDO38_RS29295;Dbxref=GenBank:WP_059475093.1;Name=WP_059475093.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS29295;product=hypothetical protein;protein_id=WP_059475093.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 55483 55944 . + . ID=gene-LDO38_RS29300;Name=LDO38_RS29300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29300;old_locus_tag=BVI2075_960074 NZ_CAJZAL010000203.1 Protein Homology CDS 55483 55944 . + 0 ID=cds-WP_059475095.1;Parent=gene-LDO38_RS29300;Dbxref=GenBank:WP_059475095.1;Name=WP_059475095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217994.1;locus_tag=LDO38_RS29300;product=hypothetical protein;protein_id=WP_059475095.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 56035 56427 . + . ID=gene-LDO38_RS29305;Name=LDO38_RS29305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29305;old_locus_tag=BVI2075_960075 NZ_CAJZAL010000203.1 Protein Homology CDS 56035 56427 . + 0 ID=cds-WP_059475096.1;Parent=gene-LDO38_RS29305;Dbxref=GenBank:WP_059475096.1;Name=WP_059475096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367179.1;locus_tag=LDO38_RS29305;product=hypothetical protein;protein_id=WP_059475096.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 56436 56909 . + . ID=gene-LDO38_RS29310;Name=LDO38_RS29310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29310;old_locus_tag=BVI2075_960076 NZ_CAJZAL010000203.1 GeneMarkS-2+ CDS 56436 56909 . + 0 ID=cds-WP_059475097.1;Parent=gene-LDO38_RS29310;Dbxref=GenBank:WP_059475097.1;Name=WP_059475097.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS29310;product=hypothetical protein;protein_id=WP_059475097.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 57124 57534 . + . ID=gene-LDO38_RS29315;Name=LDO38_RS29315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29315;old_locus_tag=BVI2075_960078 NZ_CAJZAL010000203.1 Protein Homology CDS 57124 57534 . + 0 ID=cds-WP_059475098.1;Parent=gene-LDO38_RS29315;Dbxref=GenBank:WP_059475098.1;Name=WP_059475098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018432914.1;locus_tag=LDO38_RS29315;product=hypothetical protein;protein_id=WP_059475098.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 57612 59129 . + . ID=gene-LDO38_RS29320;Name=LDO38_RS29320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29320;old_locus_tag=BVI2075_960079 NZ_CAJZAL010000203.1 Protein Homology CDS 57612 59129 . + 0 ID=cds-WP_059475099.1;Parent=gene-LDO38_RS29320;Dbxref=GenBank:WP_059475099.1;Name=WP_059475099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217998.1;locus_tag=LDO38_RS29320;product=hypothetical protein;protein_id=WP_059475099.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 59443 60468 . + . ID=gene-LDO38_RS29325;Name=LDO38_RS29325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29325;old_locus_tag=BVI2075_960080 NZ_CAJZAL010000203.1 Protein Homology CDS 59443 60468 . + 0 ID=cds-WP_059475100.1;Parent=gene-LDO38_RS29325;Dbxref=GenBank:WP_059475100.1;Name=WP_059475100.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700032.1;locus_tag=LDO38_RS29325;product=ATP-binding protein;protein_id=WP_059475100.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 60568 61494 . + . ID=gene-LDO38_RS29330;Name=LDO38_RS29330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29330;old_locus_tag=BVI2075_960081 NZ_CAJZAL010000203.1 Protein Homology CDS 60568 61494 . + 0 ID=cds-WP_059475101.1;Parent=gene-LDO38_RS29330;Dbxref=GenBank:WP_059475101.1;Name=WP_059475101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367171.1;locus_tag=LDO38_RS29330;product=hypothetical protein;protein_id=WP_059475101.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 61502 62743 . + . ID=gene-LDO38_RS29335;Name=LDO38_RS29335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29335;old_locus_tag=BVI2075_960083 NZ_CAJZAL010000203.1 Protein Homology CDS 61502 62743 . + 0 ID=cds-WP_059475102.1;Parent=gene-LDO38_RS29335;Dbxref=GenBank:WP_059475102.1;Name=WP_059475102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757263.1;locus_tag=LDO38_RS29335;product=vWA domain-containing protein;protein_id=WP_059475102.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 63008 64054 . + . ID=gene-LDO38_RS29340;Name=LDO38_RS29340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29340;old_locus_tag=BVI2075_960084 NZ_CAJZAL010000203.1 Protein Homology CDS 63008 64054 . + 0 ID=cds-WP_059475128.1;Parent=gene-LDO38_RS29340;Dbxref=GenBank:WP_059475128.1;Name=WP_059475128.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875532.1;locus_tag=LDO38_RS29340;product=CpaF family protein;protein_id=WP_059475128.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 64107 64448 . + . ID=gene-LDO38_RS29345;Name=LDO38_RS29345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29345;old_locus_tag=BVI2075_960085 NZ_CAJZAL010000203.1 Protein Homology CDS 64107 64448 . + 0 ID=cds-WP_373421727.1;Parent=gene-LDO38_RS29345;Dbxref=GenBank:WP_373421727.1;Name=WP_373421727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875533.1;locus_tag=LDO38_RS29345;product=conjugal transfer protein TrbC;protein_id=WP_373421727.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 64489 64752 . + . ID=gene-LDO38_RS29350;Name=LDO38_RS29350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29350;old_locus_tag=BVI2075_960086 NZ_CAJZAL010000203.1 Protein Homology CDS 64489 64752 . + 0 ID=cds-WP_059475129.1;Parent=gene-LDO38_RS29350;Dbxref=GenBank:WP_059475129.1;Name=WP_059475129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094736.1;locus_tag=LDO38_RS29350;product=conjugal transfer protein;protein_id=WP_059475129.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 64746 67208 . + . ID=gene-LDO38_RS29355;Name=LDO38_RS29355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29355;old_locus_tag=BVI2075_960087 NZ_CAJZAL010000203.1 Protein Homology CDS 64746 67208 . + 0 ID=cds-WP_059475104.1;Parent=gene-LDO38_RS29355;Dbxref=GenBank:WP_059475104.1;Name=WP_059475104.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367166.1;locus_tag=LDO38_RS29355;product=VirB4 family type IV secretion system protein;protein_id=WP_059475104.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 67220 67957 . + . ID=gene-LDO38_RS29360;Name=LDO38_RS29360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29360;old_locus_tag=BVI2075_960088 NZ_CAJZAL010000203.1 Protein Homology CDS 67220 67957 . + 0 ID=cds-WP_059475105.1;Parent=gene-LDO38_RS29360;Dbxref=GenBank:WP_059475105.1;Name=WP_059475105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094734.1;locus_tag=LDO38_RS29360;product=hypothetical protein;protein_id=WP_059475105.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 67967 69034 . + . ID=gene-LDO38_RS29365;Name=LDO38_RS29365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29365;old_locus_tag=BVI2075_960089 NZ_CAJZAL010000203.1 Protein Homology CDS 67967 69034 . + 0 ID=cds-WP_059475106.1;Parent=gene-LDO38_RS29365;Dbxref=GenBank:WP_059475106.1;Name=WP_059475106.1;Ontology_term=GO:0030255;gbkey=CDS;go_process=protein secretion by the type IV secretion system|0030255||IEA;inference=COORDINATES: protein motif:HMM:NF016491.6;locus_tag=LDO38_RS29365;product=type IV secretion system protein;protein_id=WP_059475106.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 69031 70257 . + . ID=gene-LDO38_RS29370;Name=LDO38_RS29370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29370;old_locus_tag=BVI2075_960090 NZ_CAJZAL010000203.1 Protein Homology CDS 69031 70257 . + 0 ID=cds-WP_059475107.1;Parent=gene-LDO38_RS29370;Dbxref=GenBank:WP_059475107.1;Name=WP_059475107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218010.1;locus_tag=LDO38_RS29370;product=TraI domain-containing protein;protein_id=WP_059475107.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 70254 72122 . + . ID=gene-LDO38_RS29375;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=LDO38_RS29375;old_locus_tag=BVI2075_960091 NZ_CAJZAL010000203.1 Protein Homology CDS 70254 72122 . + 0 ID=cds-WP_059475108.1;Parent=gene-LDO38_RS29375;Dbxref=GenBank:WP_059475108.1;Name=WP_059475108.1;Note=Members of this protein family are the putative conjugative coupling factor%2C TraD%2C as the term is used for the SXT and TOL plasmid systems.;Ontology_term=GO:0015074;gbkey=CDS;gene=traD;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757255.1;locus_tag=LDO38_RS29375;product=conjugative transfer system coupling protein TraD;protein_id=WP_059475108.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 72133 72645 . + . ID=gene-LDO38_RS29380;Name=LDO38_RS29380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29380;old_locus_tag=BVI2075_960092 NZ_CAJZAL010000203.1 Protein Homology CDS 72133 72645 . + 0 ID=cds-WP_059475109.1;Parent=gene-LDO38_RS29380;Dbxref=GenBank:WP_059475109.1;Name=WP_059475109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700044.1;locus_tag=LDO38_RS29380;product=hypothetical protein;protein_id=WP_059475109.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 72608 72892 . + . ID=gene-LDO38_RS29385;Name=LDO38_RS29385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29385;old_locus_tag=BVI2075_960093 NZ_CAJZAL010000203.1 Protein Homology CDS 72608 72892 . + 0 ID=cds-WP_059475110.1;Parent=gene-LDO38_RS29385;Dbxref=GenBank:WP_059475110.1;Name=WP_059475110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367431.1;locus_tag=LDO38_RS29385;product=hypothetical protein;protein_id=WP_059475110.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 72882 73487 . + . ID=gene-LDO38_RS29390;Name=LDO38_RS29390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29390;old_locus_tag=BVI2075_960094 NZ_CAJZAL010000203.1 Protein Homology CDS 72882 73487 . + 0 ID=cds-WP_059475111.1;Parent=gene-LDO38_RS29390;Dbxref=GenBank:WP_059475111.1;Name=WP_059475111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875541.1;locus_tag=LDO38_RS29390;product=DUF4400 domain-containing protein;protein_id=WP_059475111.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 73840 74739 . + . ID=gene-LDO38_RS29395;Name=LDO38_RS29395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29395;old_locus_tag=BVI2075_960096 NZ_CAJZAL010000203.1 Protein Homology CDS 73840 74739 . + 0 ID=cds-WP_059475112.1;Parent=gene-LDO38_RS29395;Dbxref=GenBank:WP_059475112.1;Name=WP_059475112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020071147.1;locus_tag=LDO38_RS29395;product=hypothetical protein;protein_id=WP_059475112.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 74758 76464 . + . ID=gene-LDO38_RS29400;Name=LDO38_RS29400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29400;old_locus_tag=BVI2075_960097 NZ_CAJZAL010000203.1 Protein Homology CDS 74758 76464 . + 0 ID=cds-WP_059896591.1;Parent=gene-LDO38_RS29400;Dbxref=GenBank:WP_059896591.1;Name=WP_059896591.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524,GO:0016853,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,isomerase activity|0016853||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757250.1;locus_tag=LDO38_RS29400;product=ATP-dependent helicase;protein_id=WP_059896591.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 76524 77027 . - . ID=gene-LDO38_RS29405;Name=LDO38_RS29405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29405;old_locus_tag=BVI2075_960098 NZ_CAJZAL010000203.1 GeneMarkS-2+ CDS 76524 77027 . - 0 ID=cds-WP_124259823.1;Parent=gene-LDO38_RS29405;Dbxref=GenBank:WP_124259823.1;Name=WP_124259823.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS29405;product=hypothetical protein;protein_id=WP_124259823.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 77049 77468 . - . ID=gene-LDO38_RS29410;Name=LDO38_RS29410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29410;old_locus_tag=BVI2075_960099 NZ_CAJZAL010000203.1 Protein Homology CDS 77049 77468 . - 0 ID=cds-WP_059475115.1;Parent=gene-LDO38_RS29410;Dbxref=GenBank:WP_059475115.1;Name=WP_059475115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007585056.1;locus_tag=LDO38_RS29410;product=bactofilin family protein;protein_id=WP_059475115.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 77480 78328 . - . ID=gene-LDO38_RS29415;Name=LDO38_RS29415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29415;old_locus_tag=BVI2075_960100 NZ_CAJZAL010000203.1 GeneMarkS-2+ CDS 77480 78328 . - 0 ID=cds-WP_224056764.1;Parent=gene-LDO38_RS29415;Dbxref=GenBank:WP_224056764.1;Name=WP_224056764.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS29415;product=hypothetical protein;protein_id=WP_224056764.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 78418 79026 . - . ID=gene-LDO38_RS29420;Name=LDO38_RS29420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29420;old_locus_tag=BVI2075_960101 NZ_CAJZAL010000203.1 Protein Homology CDS 78418 79026 . - 0 ID=cds-WP_059475117.1;Parent=gene-LDO38_RS29420;Dbxref=GenBank:WP_059475117.1;Name=WP_059475117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094720.1;locus_tag=LDO38_RS29420;product=hypothetical protein;protein_id=WP_059475117.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 79649 79915 . + . ID=gene-LDO38_RS29425;Name=LDO38_RS29425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29425 NZ_CAJZAL010000203.1 Protein Homology CDS 79649 79915 . + 0 ID=cds-WP_059475118.1;Parent=gene-LDO38_RS29425;Dbxref=GenBank:WP_059475118.1;Name=WP_059475118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018432949.1;locus_tag=LDO38_RS29425;product=DUF7696 family protein;protein_id=WP_059475118.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 79912 81222 . + . ID=gene-LDO38_RS29430;Name=LDO38_RS29430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29430;old_locus_tag=BVI2075_960102 NZ_CAJZAL010000203.1 Protein Homology CDS 79912 81222 . + 0 ID=cds-WP_059475119.1;Parent=gene-LDO38_RS29430;Dbxref=GenBank:WP_059475119.1;Name=WP_059475119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367422.1;locus_tag=LDO38_RS29430;product=recombination directionality factor;protein_id=WP_059475119.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 81321 82700 . + . ID=gene-LDO38_RS29435;Name=LDO38_RS29435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29435;old_locus_tag=BVI2075_960103 NZ_CAJZAL010000203.1 Protein Homology CDS 81321 82700 . + 0 ID=cds-WP_059475120.1;Parent=gene-LDO38_RS29435;Dbxref=GenBank:WP_059475120.1;Name=WP_059475120.1;Ontology_term=GO:0003677,GO:0042578,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094717.1;locus_tag=LDO38_RS29435;product=metallophosphoesterase family protein;protein_id=WP_059475120.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 82902 83429 . + . ID=gene-LDO38_RS29440;Name=LDO38_RS29440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29440;old_locus_tag=BVI2075_960104 NZ_CAJZAL010000203.1 Protein Homology CDS 82902 83429 . + 0 ID=cds-WP_059475121.1;Parent=gene-LDO38_RS29440;Dbxref=GenBank:WP_059475121.1;Name=WP_059475121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367419.1;locus_tag=LDO38_RS29440;product=hypothetical protein;protein_id=WP_059475121.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 83417 85738 . + . ID=gene-LDO38_RS29445;Name=LDO38_RS29445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29445;old_locus_tag=BVI2075_960105 NZ_CAJZAL010000203.1 Protein Homology CDS 83417 85738 . + 0 ID=cds-WP_059475122.1;Parent=gene-LDO38_RS29445;Dbxref=GenBank:WP_059475122.1;Name=WP_059475122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013954380.1;locus_tag=LDO38_RS29445;product=hypothetical protein;protein_id=WP_059475122.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 85829 86005 . + . ID=gene-LDO38_RS29450;Name=LDO38_RS29450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29450;old_locus_tag=BVI2075_960106 NZ_CAJZAL010000203.1 Protein Homology CDS 85829 86005 . + 0 ID=cds-WP_166677036.1;Parent=gene-LDO38_RS29450;Dbxref=GenBank:WP_166677036.1;Name=WP_166677036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700058.1;locus_tag=LDO38_RS29450;product=hypothetical protein;protein_id=WP_166677036.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 86028 86222 . + . ID=gene-LDO38_RS29455;Name=LDO38_RS29455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29455;old_locus_tag=BVI2075_960107 NZ_CAJZAL010000203.1 Protein Homology CDS 86028 86222 . + 0 ID=cds-WP_059475123.1;Parent=gene-LDO38_RS29455;Dbxref=GenBank:WP_059475123.1;Name=WP_059475123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757239.1;locus_tag=LDO38_RS29455;product=hypothetical protein;protein_id=WP_059475123.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 86282 86689 . + . ID=gene-LDO38_RS29460;Name=LDO38_RS29460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29460;old_locus_tag=BVI2075_960108 NZ_CAJZAL010000203.1 GeneMarkS-2+ CDS 86282 86689 . + 0 ID=cds-WP_155625224.1;Parent=gene-LDO38_RS29460;Dbxref=GenBank:WP_155625224.1;Name=WP_155625224.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS29460;product=hypothetical protein;protein_id=WP_155625224.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 86777 87337 . + . ID=gene-LDO38_RS29465;Name=LDO38_RS29465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29465;old_locus_tag=BVI2075_960109 NZ_CAJZAL010000203.1 Protein Homology CDS 86777 87337 . + 0 ID=cds-WP_059475124.1;Parent=gene-LDO38_RS29465;Dbxref=GenBank:WP_059475124.1;Name=WP_059475124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700060.1;locus_tag=LDO38_RS29465;product=phospholipase D family protein;protein_id=WP_059475124.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 87409 88926 . + . ID=gene-LDO38_RS29470;Name=LDO38_RS29470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29470;old_locus_tag=BVI2075_960110 NZ_CAJZAL010000203.1 Protein Homology CDS 87409 88926 . + 0 ID=cds-WP_059475130.1;Parent=gene-LDO38_RS29470;Dbxref=GenBank:WP_059475130.1;Name=WP_059475130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700061.1;locus_tag=LDO38_RS29470;product=phosphoadenosine phosphosulfate reductase family protein;protein_id=WP_059475130.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 89058 89537 . - . ID=gene-LDO38_RS29475;Name=LDO38_RS29475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29475;old_locus_tag=BVI2075_960111 NZ_CAJZAL010000203.1 Protein Homology CDS 89058 89537 . - 0 ID=cds-WP_059475125.1;Parent=gene-LDO38_RS29475;Dbxref=GenBank:WP_059475125.1;Name=WP_059475125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700062.1;locus_tag=LDO38_RS29475;product=hypothetical protein;protein_id=WP_059475125.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 89614 90537 . - . ID=gene-LDO38_RS29480;Name=LDO38_RS29480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29480;old_locus_tag=BVI2075_960112 NZ_CAJZAL010000203.1 Protein Homology CDS 89614 90537 . - 0 ID=cds-WP_059475126.1;Parent=gene-LDO38_RS29480;Dbxref=GenBank:WP_059475126.1;Name=WP_059475126.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762586.1;locus_tag=LDO38_RS29480;product=tyrosine-type recombinase/integrase;protein_id=WP_059475126.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 90756 91154 . - . ID=gene-LDO38_RS29485;Name=LDO38_RS29485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29485;old_locus_tag=BVI2075_960113 NZ_CAJZAL010000203.1 Protein Homology CDS 90756 91154 . - 0 ID=cds-WP_224056765.1;Parent=gene-LDO38_RS29485;Dbxref=GenBank:WP_224056765.1;Name=WP_224056765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367410.1;locus_tag=LDO38_RS29485;product=DUF2471 family protein;protein_id=WP_224056765.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 91246 91545 . - . ID=gene-LDO38_RS29490;Name=LDO38_RS29490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29490 NZ_CAJZAL010000203.1 Protein Homology CDS 91246 91545 . - 0 ID=cds-WP_043292978.1;Parent=gene-LDO38_RS29490;Dbxref=GenBank:WP_043292978.1;Name=WP_043292978.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875561.1;locus_tag=LDO38_RS29490;product=H-NS histone family protein;protein_id=WP_043292978.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 91650 94796 . - . ID=gene-LDO38_RS29495;Name=LDO38_RS29495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29495;old_locus_tag=BVI2075_960114 NZ_CAJZAL010000203.1 Protein Homology CDS 91650 94796 . - 0 ID=cds-WP_224056766.1;Parent=gene-LDO38_RS29495;Dbxref=GenBank:WP_224056766.1;Name=WP_224056766.1;Ontology_term=GO:0006260,GO:0006281,GO:0003676,GO:0003887,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012211067.1;locus_tag=LDO38_RS29495;product=error-prone DNA polymerase;protein_id=WP_224056766.1;transl_table=11 NZ_CAJZAL010000203.1 RefSeq gene 94803 95915 . - . ID=gene-LDO38_RS29500;Name=LDO38_RS29500;end_range=95915,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29500;old_locus_tag=BVI2075_960115;partial=true NZ_CAJZAL010000203.1 Protein Homology CDS 94803 95915 . - 0 ID=cds-WP_224056767.1;Parent=gene-LDO38_RS29500;Dbxref=GenBank:WP_224056767.1;Name=WP_224056767.1;Ontology_term=GO:0006260,GO:0006281,GO:0003684,GO:0003887,GO:0046872;end_range=95915,.;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA,metal ion binding|0046872||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011695098.1;locus_tag=LDO38_RS29500;partial=true;product=Y-family DNA polymerase;protein_id=WP_224056767.1;transl_table=11 ##sequence-region NZ_CAJZAL010000204.1 1 65437 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000204.1 RefSeq region 1 65437 . + . ID=NZ_CAJZAL010000204.1:1..65437;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_97 NZ_CAJZAL010000204.1 RefSeq pseudogene 1 595 . - . ID=gene-LDO38_RS29505;Name=LDO38_RS29505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS29505;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAL010000204.1 Protein Homology CDS 1 595 . - 0 ID=cds-LDO38_RS29505;Parent=gene-LDO38_RS29505;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417086.1;locus_tag=LDO38_RS29505;partial=true;product=AraC family transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 729 1619 . + . ID=gene-LDO38_RS29510;Name=LDO38_RS29510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29510;old_locus_tag=BVI2075_970002 NZ_CAJZAL010000204.1 Protein Homology CDS 729 1619 . + 0 ID=cds-WP_014722528.1;Parent=gene-LDO38_RS29510;Dbxref=GenBank:WP_014722528.1;Name=WP_014722528.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544702.1;locus_tag=LDO38_RS29510;product=DMT family transporter;protein_id=WP_014722528.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 2001 3215 . - . ID=gene-LDO38_RS29515;Name=LDO38_RS29515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29515;old_locus_tag=BVI2075_970003 NZ_CAJZAL010000204.1 Protein Homology CDS 2001 3215 . - 0 ID=cds-WP_011883456.1;Parent=gene-LDO38_RS29515;Dbxref=GenBank:WP_011883456.1;Name=WP_011883456.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484942.1;locus_tag=LDO38_RS29515;product=MFS transporter;protein_id=WP_011883456.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 3556 5154 . + . ID=gene-LDO38_RS29520;Name=xdhA;gbkey=Gene;gene=xdhA;gene_biotype=protein_coding;locus_tag=LDO38_RS29520;old_locus_tag=BVI2075_970004 NZ_CAJZAL010000204.1 Protein Homology CDS 3556 5154 . + 0 ID=cds-WP_069246147.1;Parent=gene-LDO38_RS29520;Dbxref=GenBank:WP_069246147.1;Name=WP_069246147.1;Ontology_term=GO:0009115,GO:0004854,GO:0050660;gbkey=CDS;gene=xdhA;go_function=xanthine dehydrogenase activity|0004854||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=xanthine catabolic process|0009115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883457.1;locus_tag=LDO38_RS29520;product=xanthine dehydrogenase small subunit;protein_id=WP_069246147.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 5173 7536 . + . ID=gene-LDO38_RS29525;Name=xdhB;gbkey=Gene;gene=xdhB;gene_biotype=protein_coding;locus_tag=LDO38_RS29525;old_locus_tag=BVI2075_970005 NZ_CAJZAL010000204.1 Protein Homology CDS 5173 7536 . + 0 ID=cds-WP_011883458.1;Parent=gene-LDO38_RS29525;Dbxref=GenBank:WP_011883458.1;Name=WP_011883458.1;Ontology_term=GO:0009115,GO:0004854,GO:0030151;gbkey=CDS;gene=xdhB;go_function=xanthine dehydrogenase activity|0004854||IEA,molybdenum ion binding|0030151||IEA;go_process=xanthine catabolic process|0009115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883458.1;locus_tag=LDO38_RS29525;product=xanthine dehydrogenase molybdopterin binding subunit;protein_id=WP_011883458.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 7624 8277 . + . ID=gene-LDO38_RS29530;Name=xdhC;gbkey=Gene;gene=xdhC;gene_biotype=protein_coding;locus_tag=LDO38_RS29530;old_locus_tag=BVI2075_970006 NZ_CAJZAL010000204.1 Protein Homology CDS 7624 8277 . + 0 ID=cds-WP_069246148.1;Parent=gene-LDO38_RS29530;Dbxref=GenBank:WP_069246148.1;Name=WP_069246148.1;Ontology_term=GO:0009115,GO:0065003,GO:0043546;gbkey=CDS;gene=xdhC;go_function=molybdopterin cofactor binding|0043546||IEA;go_process=xanthine catabolic process|0009115||IEA,protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883460.1;locus_tag=LDO38_RS29530;product=xanthine dehydrogenase accessory protein XdhC;protein_id=WP_069246148.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 8604 8837 . + . ID=gene-LDO38_RS29535;Name=LDO38_RS29535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29535;old_locus_tag=BVI2075_970007 NZ_CAJZAL010000204.1 Protein Homology CDS 8604 8837 . + 0 ID=cds-WP_011883461.1;Parent=gene-LDO38_RS29535;Dbxref=GenBank:WP_011883461.1;Name=WP_011883461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883461.1;locus_tag=LDO38_RS29535;product=FitA-like ribbon-helix-helix domain-containing protein;protein_id=WP_011883461.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 8824 9243 . + . ID=gene-LDO38_RS29540;Name=LDO38_RS29540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29540;old_locus_tag=BVI2075_970008 NZ_CAJZAL010000204.1 Protein Homology CDS 8824 9243 . + 0 ID=cds-WP_059894711.1;Parent=gene-LDO38_RS29540;Dbxref=GenBank:WP_059894711.1;Name=WP_059894711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883463.1;locus_tag=LDO38_RS29540;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_059894711.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 9373 9774 . + . ID=gene-LDO38_RS29545;Name=LDO38_RS29545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29545;old_locus_tag=BVI2075_970009 NZ_CAJZAL010000204.1 Protein Homology CDS 9373 9774 . + 0 ID=cds-WP_046426267.1;Parent=gene-LDO38_RS29545;Dbxref=GenBank:WP_046426267.1;Name=WP_046426267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656100.1;locus_tag=LDO38_RS29545;product=polyketide cyclase;protein_id=WP_046426267.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 9815 10759 . - . ID=gene-LDO38_RS29550;Name=LDO38_RS29550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29550;old_locus_tag=BVI2075_970010 NZ_CAJZAL010000204.1 Protein Homology CDS 9815 10759 . - 0 ID=cds-WP_069246149.1;Parent=gene-LDO38_RS29550;Dbxref=GenBank:WP_069246149.1;Name=WP_069246149.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476764.1;locus_tag=LDO38_RS29550;product=LysR family transcriptional regulator;protein_id=WP_069246149.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 10829 11467 . - . ID=gene-LDO38_RS29555;Name=LDO38_RS29555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29555;old_locus_tag=BVI2075_970011 NZ_CAJZAL010000204.1 Protein Homology CDS 10829 11467 . - 0 ID=cds-WP_011883469.1;Parent=gene-LDO38_RS29555;Dbxref=GenBank:WP_011883469.1;Name=WP_011883469.1;Ontology_term=GO:1901170,GO:0018845,GO:0043295;gbkey=CDS;go_function=2-hydroxychromene-2-carboxylate isomerase activity|0018845||IEA,glutathione binding|0043295||IEA;go_process=naphthalene catabolic process|1901170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601123.1;locus_tag=LDO38_RS29555;product=2-hydroxychromene-2-carboxylate isomerase;protein_id=WP_011883469.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 11562 12995 . - . ID=gene-LDO38_RS29560;Name=LDO38_RS29560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29560;old_locus_tag=BVI2075_970012 NZ_CAJZAL010000204.1 Protein Homology CDS 11562 12995 . - 0 ID=cds-WP_011883471.1;Parent=gene-LDO38_RS29560;Dbxref=GenBank:WP_011883471.1;Name=WP_011883471.1;Ontology_term=GO:0055085,GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351112.1;locus_tag=LDO38_RS29560;product=TAXI family TRAP transporter solute-binding subunit;protein_id=WP_011883471.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 13464 13829 . + . ID=gene-LDO38_RS29565;Name=LDO38_RS29565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29565;old_locus_tag=BVI2075_970014 NZ_CAJZAL010000204.1 Protein Homology CDS 13464 13829 . + 0 ID=cds-WP_059567237.1;Parent=gene-LDO38_RS29565;Dbxref=GenBank:WP_059567237.1;Name=WP_059567237.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759602.1;locus_tag=LDO38_RS29565;product=BON domain-containing protein;protein_id=WP_059567237.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 13981 16071 . + . ID=gene-LDO38_RS29570;Name=LDO38_RS29570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29570;old_locus_tag=BVI2075_970015 NZ_CAJZAL010000204.1 Protein Homology CDS 13981 16071 . + 0 ID=cds-WP_059622092.1;Parent=gene-LDO38_RS29570;Dbxref=GenBank:WP_059622092.1;Name=WP_059622092.1;Ontology_term=GO:0019605,GO:0047989,GO:0005615;gbkey=CDS;go_component=extracellular space|0005615||IEA;go_function=hydroxybutyrate-dimer hydrolase activity|0047989||IEA;go_process=butyrate metabolic process|0019605||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656103.1;locus_tag=LDO38_RS29570;product=3-hydroxybutyrate oligomer hydrolase family protein;protein_id=WP_059622092.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 16679 18514 . + . ID=gene-LDO38_RS29575;Name=LDO38_RS29575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29575;old_locus_tag=BVI2075_970017 NZ_CAJZAL010000204.1 Protein Homology CDS 16679 18514 . + 0 ID=cds-WP_069246150.1;Parent=gene-LDO38_RS29575;Dbxref=GenBank:WP_069246150.1;Name=WP_069246150.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185580.1;locus_tag=LDO38_RS29575;product=S10 family peptidase;protein_id=WP_069246150.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 18685 19473 . - . ID=gene-LDO38_RS29580;Name=LDO38_RS29580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29580;old_locus_tag=BVI2075_970018 NZ_CAJZAL010000204.1 Protein Homology CDS 18685 19473 . - 0 ID=cds-WP_011883481.1;Parent=gene-LDO38_RS29580;Dbxref=GenBank:WP_011883481.1;Name=WP_011883481.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544716.1;locus_tag=LDO38_RS29580;product=sulfite exporter TauE/SafE family protein;protein_id=WP_011883481.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 19759 21198 . - . ID=gene-LDO38_RS29585;Name=LDO38_RS29585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29585;old_locus_tag=BVI2075_970019 NZ_CAJZAL010000204.1 Protein Homology CDS 19759 21198 . - 0 ID=cds-WP_060122187.1;Parent=gene-LDO38_RS29585;Dbxref=GenBank:WP_060122187.1;Name=WP_060122187.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889464.1;locus_tag=LDO38_RS29585;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_060122187.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 21311 22045 . - . ID=gene-LDO38_RS29590;Name=LDO38_RS29590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29590;old_locus_tag=BVI2075_970020 NZ_CAJZAL010000204.1 Protein Homology CDS 21311 22045 . - 0 ID=cds-WP_059462536.1;Parent=gene-LDO38_RS29590;Dbxref=GenBank:WP_059462536.1;Name=WP_059462536.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544718.1;locus_tag=LDO38_RS29590;product=DsbA family oxidoreductase;protein_id=WP_059462536.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 22192 22839 . - . ID=gene-LDO38_RS29595;Name=LDO38_RS29595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29595;old_locus_tag=BVI2075_970021 NZ_CAJZAL010000204.1 Protein Homology CDS 22192 22839 . - 0 ID=cds-WP_034194486.1;Parent=gene-LDO38_RS29595;Dbxref=GenBank:WP_034194486.1;Name=WP_034194486.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091537.1;locus_tag=LDO38_RS29595;product=helix-turn-helix transcriptional regulator;protein_id=WP_034194486.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 23551 25197 . + . ID=gene-LDO38_RS29600;Name=LDO38_RS29600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29600;old_locus_tag=BVI2075_970023 NZ_CAJZAL010000204.1 Protein Homology CDS 23551 25197 . + 0 ID=cds-WP_224056768.1;Parent=gene-LDO38_RS29600;Dbxref=GenBank:WP_224056768.1;Name=WP_224056768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883489.1;locus_tag=LDO38_RS29600;product=beta strand repeat-containing protein;protein_id=WP_224056768.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 25490 25849 . + . ID=gene-LDO38_RS29605;Name=LDO38_RS29605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29605;old_locus_tag=BVI2075_970024 NZ_CAJZAL010000204.1 Protein Homology CDS 25490 25849 . + 0 ID=cds-WP_059462534.1;Parent=gene-LDO38_RS29605;Dbxref=GenBank:WP_059462534.1;Name=WP_059462534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544726.1;locus_tag=LDO38_RS29605;product=COG4315 family predicted lipoprotein;protein_id=WP_059462534.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 25899 26414 . + . ID=gene-LDO38_RS29610;Name=LDO38_RS29610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29610;old_locus_tag=BVI2075_970025 NZ_CAJZAL010000204.1 Protein Homology CDS 25899 26414 . + 0 ID=cds-WP_059462533.1;Parent=gene-LDO38_RS29610;Dbxref=GenBank:WP_059462533.1;Name=WP_059462533.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400979.1;locus_tag=LDO38_RS29610;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_059462533.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 26414 27205 . + . ID=gene-LDO38_RS29615;Name=LDO38_RS29615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29615;old_locus_tag=BVI2075_970026 NZ_CAJZAL010000204.1 Protein Homology CDS 26414 27205 . + 0 ID=cds-WP_011883496.1;Parent=gene-LDO38_RS29615;Dbxref=GenBank:WP_011883496.1;Name=WP_011883496.1;Ontology_term=GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722544.1;locus_tag=LDO38_RS29615;product=anti-sigma factor family protein;protein_id=WP_011883496.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 27237 27656 . + . ID=gene-LDO38_RS29620;Name=LDO38_RS29620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29620;old_locus_tag=BVI2075_970027 NZ_CAJZAL010000204.1 Protein Homology CDS 27237 27656 . + 0 ID=cds-WP_059462550.1;Parent=gene-LDO38_RS29620;Dbxref=GenBank:WP_059462550.1;Name=WP_059462550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883498.1;locus_tag=LDO38_RS29620;product=hypothetical protein;protein_id=WP_059462550.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 27653 28285 . + . ID=gene-LDO38_RS29625;Name=LDO38_RS29625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29625;old_locus_tag=BVI2075_970028 NZ_CAJZAL010000204.1 Protein Homology CDS 27653 28285 . + 0 ID=cds-WP_014722546.1;Parent=gene-LDO38_RS29625;Dbxref=GenBank:WP_014722546.1;Name=WP_014722546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897912.1;locus_tag=LDO38_RS29625;product=sigma-E factor regulatory protein RseB domain-containing protein;protein_id=WP_014722546.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 28309 28818 . + . ID=gene-LDO38_RS29630;Name=LDO38_RS29630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29630;old_locus_tag=BVI2075_970029 NZ_CAJZAL010000204.1 Protein Homology CDS 28309 28818 . + 0 ID=cds-WP_011883502.1;Parent=gene-LDO38_RS29630;Dbxref=GenBank:WP_011883502.1;Name=WP_011883502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753916.1;locus_tag=LDO38_RS29630;product=SRPBCC family protein;protein_id=WP_011883502.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 29193 29486 . + . ID=gene-LDO38_RS29635;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=LDO38_RS29635;old_locus_tag=BVI2075_970031 NZ_CAJZAL010000204.1 Protein Homology CDS 29193 29486 . + 0 ID=cds-WP_004186661.1;Parent=gene-LDO38_RS29635;Dbxref=GenBank:WP_004186661.1;Name=WP_004186661.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=groES;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544732.1;locus_tag=LDO38_RS29635;product=co-chaperone GroES;protein_id=WP_004186661.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 29533 31173 . + . ID=gene-LDO38_RS29640;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=LDO38_RS29640;old_locus_tag=BVI2075_970032 NZ_CAJZAL010000204.1 Protein Homology CDS 29533 31173 . + 0 ID=cds-WP_011883504.1;Parent=gene-LDO38_RS29640;Dbxref=GenBank:WP_011883504.1;Name=WP_011883504.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753915.1;locus_tag=LDO38_RS29640;product=chaperonin GroEL;protein_id=WP_011883504.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 31322 32188 . - . ID=gene-LDO38_RS29645;Name=LDO38_RS29645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29645;old_locus_tag=BVI2075_970033 NZ_CAJZAL010000204.1 Protein Homology CDS 31322 32188 . - 0 ID=cds-WP_034194489.1;Parent=gene-LDO38_RS29645;Dbxref=GenBank:WP_034194489.1;Name=WP_034194489.1;Ontology_term=GO:0009228,GO:0009229,GO:0005524,GO:0008902,GO:0008972;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA,thiamine diphosphate biosynthetic process|0009229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753914.1;locus_tag=LDO38_RS29645;product=hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;protein_id=WP_034194489.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 32444 32614 . + . ID=gene-LDO38_RS29650;Name=LDO38_RS29650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29650;old_locus_tag=BVI2075_970034 NZ_CAJZAL010000204.1 Protein Homology CDS 32444 32614 . + 0 ID=cds-WP_004186709.1;Parent=gene-LDO38_RS29650;Dbxref=GenBank:WP_004186709.1;Name=WP_004186709.1;Ontology_term=GO:0043448,GO:0005506,GO:0009055;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=alkane catabolic process|0043448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013436118.1;locus_tag=LDO38_RS29650;product=rubredoxin;protein_id=WP_004186709.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 32719 34020 . + . ID=gene-LDO38_RS29655;Name=LDO38_RS29655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29655;old_locus_tag=BVI2075_970035 NZ_CAJZAL010000204.1 Protein Homology CDS 32719 34020 . + 0 ID=cds-WP_069246151.1;Parent=gene-LDO38_RS29655;Dbxref=GenBank:WP_069246151.1;Name=WP_069246151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883506.1;locus_tag=LDO38_RS29655;product=hypothetical protein;protein_id=WP_069246151.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 34203 34781 . + . ID=gene-LDO38_RS29660;Name=LDO38_RS29660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29660;old_locus_tag=BVI2075_970037 NZ_CAJZAL010000204.1 Protein Homology CDS 34203 34781 . + 0 ID=cds-WP_011883507.1;Parent=gene-LDO38_RS29660;Dbxref=GenBank:WP_011883507.1;Name=WP_011883507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185441.1;locus_tag=LDO38_RS29660;product=YqgE/AlgH family protein;protein_id=WP_011883507.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 34778 35227 . + . ID=gene-LDO38_RS29665;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=LDO38_RS29665;old_locus_tag=BVI2075_970038 NZ_CAJZAL010000204.1 Protein Homology CDS 34778 35227 . + 0 ID=cds-WP_011883510.1;Parent=gene-LDO38_RS29665;Dbxref=GenBank:WP_011883510.1;Name=WP_011883510.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762411.1;locus_tag=LDO38_RS29665;product=Holliday junction resolvase RuvX;protein_id=WP_011883510.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 35214 35729 . + . ID=gene-LDO38_RS29670;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=LDO38_RS29670;old_locus_tag=BVI2075_970039 NZ_CAJZAL010000204.1 Protein Homology CDS 35214 35729 . + 0 ID=cds-WP_011883512.1;Parent=gene-LDO38_RS29670;Dbxref=GenBank:WP_011883512.1;Name=WP_011883512.1;Ontology_term=GO:0009116;gbkey=CDS;gene=pyrR;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406351.1;locus_tag=LDO38_RS29670;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_011883512.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 35804 36835 . + . ID=gene-LDO38_RS29675;Name=LDO38_RS29675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29675;old_locus_tag=BVI2075_970040 NZ_CAJZAL010000204.1 Protein Homology CDS 35804 36835 . + 0 ID=cds-WP_014722549.1;Parent=gene-LDO38_RS29675;Dbxref=GenBank:WP_014722549.1;Name=WP_014722549.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600263.1;locus_tag=LDO38_RS29675;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_014722549.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 36887 38164 . + . ID=gene-LDO38_RS29680;Name=LDO38_RS29680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29680;old_locus_tag=BVI2075_970041 NZ_CAJZAL010000204.1 Protein Homology CDS 36887 38164 . + 0 ID=cds-WP_046426289.1;Parent=gene-LDO38_RS29680;Dbxref=GenBank:WP_046426289.1;Name=WP_046426289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897896.1;locus_tag=LDO38_RS29680;product=dihydroorotase;protein_id=WP_046426289.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 38184 39041 . + . ID=gene-LDO38_RS29685;Name=LDO38_RS29685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29685;old_locus_tag=BVI2075_970042 NZ_CAJZAL010000204.1 Protein Homology CDS 38184 39041 . + 0 ID=cds-WP_046426291.1;Parent=gene-LDO38_RS29685;Dbxref=GenBank:WP_046426291.1;Name=WP_046426291.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485105.1;locus_tag=LDO38_RS29685;product=lysophospholipid acyltransferase family protein;protein_id=WP_046426291.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 39075 39914 . - . ID=gene-LDO38_RS29690;Name=LDO38_RS29690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29690;old_locus_tag=BVI2075_970043 NZ_CAJZAL010000204.1 Protein Homology CDS 39075 39914 . - 0 ID=cds-WP_069246152.1;Parent=gene-LDO38_RS29690;Dbxref=GenBank:WP_069246152.1;Name=WP_069246152.1;Ontology_term=GO:0008803;gbkey=CDS;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765015.1;locus_tag=LDO38_RS29690;product=symmetrical bis(5'-nucleosyl)-tetraphosphatase;protein_id=WP_069246152.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 40248 41309 . + . ID=gene-LDO38_RS29695;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=LDO38_RS29695;old_locus_tag=BVI2075_970044 NZ_CAJZAL010000204.1 Protein Homology CDS 40248 41309 . + 0 ID=cds-WP_034194494.1;Parent=gene-LDO38_RS29695;Dbxref=GenBank:WP_034194494.1;Name=WP_034194494.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406347.1;locus_tag=LDO38_RS29695;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_034194494.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 41321 42214 . + . ID=gene-LDO38_RS29700;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=LDO38_RS29700;old_locus_tag=BVI2075_970045 NZ_CAJZAL010000204.1 Protein Homology CDS 41321 42214 . + 0 ID=cds-WP_034194495.1;Parent=gene-LDO38_RS29700;Dbxref=GenBank:WP_034194495.1;Name=WP_034194495.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328029.1;locus_tag=LDO38_RS29700;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_034194495.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 42199 42750 . + . ID=gene-LDO38_RS29705;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=LDO38_RS29705;old_locus_tag=BVI2075_970046 NZ_CAJZAL010000204.1 Protein Homology CDS 42199 42750 . + 0 ID=cds-WP_059558988.1;Parent=gene-LDO38_RS29705;Dbxref=GenBank:WP_059558988.1;Name=WP_059558988.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363224.1;locus_tag=LDO38_RS29705;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_059558988.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 42756 43640 . + . ID=gene-LDO38_RS29710;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=LDO38_RS29710;old_locus_tag=BVI2075_970047 NZ_CAJZAL010000204.1 Protein Homology CDS 42756 43640 . + 0 ID=cds-WP_080484326.1;Parent=gene-LDO38_RS29710;Dbxref=GenBank:WP_080484326.1;Name=WP_080484326.1;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351153.1;locus_tag=LDO38_RS29710;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_080484326.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 43645 44553 . + . ID=gene-LDO38_RS29715;Name=LDO38_RS29715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29715 NZ_CAJZAL010000204.1 Protein Homology CDS 43645 44553 . + 0 ID=cds-WP_051974451.1;Parent=gene-LDO38_RS29715;Dbxref=GenBank:WP_051974451.1;Name=WP_051974451.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328031.1;locus_tag=LDO38_RS29715;product=glycosyltransferase family 2 protein;protein_id=WP_051974451.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 44593 45375 . + . ID=gene-LDO38_RS29720;Name=LDO38_RS29720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29720;old_locus_tag=BVI2075_970050 NZ_CAJZAL010000204.1 Protein Homology CDS 44593 45375 . + 0 ID=cds-WP_224056769.1;Parent=gene-LDO38_RS29720;Dbxref=GenBank:WP_224056769.1;Name=WP_224056769.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018419607.1;locus_tag=LDO38_RS29720;product=ABC transporter permease;protein_id=WP_224056769.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 45386 46132 . + . ID=gene-LDO38_RS29725;Name=LDO38_RS29725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29725;old_locus_tag=BVI2075_970051 NZ_CAJZAL010000204.1 Protein Homology CDS 45386 46132 . + 0 ID=cds-WP_059459216.1;Parent=gene-LDO38_RS29725;Dbxref=GenBank:WP_059459216.1;Name=WP_059459216.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018419608.1;locus_tag=LDO38_RS29725;product=ABC transporter ATP-binding protein;protein_id=WP_059459216.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 46236 46940 . + . ID=gene-LDO38_RS29730;Name=LDO38_RS29730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29730 NZ_CAJZAL010000204.1 Protein Homology CDS 46236 46940 . + 0 ID=cds-WP_166677050.1;Parent=gene-LDO38_RS29730;Dbxref=GenBank:WP_166677050.1;Name=WP_166677050.1;Ontology_term=GO:0008146,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sulfotransferase activity|0008146||IEA;inference=COORDINATES: protein motif:HMM:NF015527.6;locus_tag=LDO38_RS29730;product=sulfotransferase family 2 domain-containing protein;protein_id=WP_166677050.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 47012 47932 . + . ID=gene-LDO38_RS29735;Name=LDO38_RS29735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29735;old_locus_tag=BVI2075_970053 NZ_CAJZAL010000204.1 Protein Homology CDS 47012 47932 . + 0 ID=cds-WP_059558984.1;Parent=gene-LDO38_RS29735;Dbxref=GenBank:WP_059558984.1;Name=WP_059558984.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF027681.6;locus_tag=LDO38_RS29735;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_059558984.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 47996 49852 . + . ID=gene-LDO38_RS29740;Name=LDO38_RS29740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29740;old_locus_tag=BVI2075_970054 NZ_CAJZAL010000204.1 Protein Homology CDS 47996 49852 . + 0 ID=cds-WP_034194500.1;Parent=gene-LDO38_RS29740;Dbxref=GenBank:WP_034194500.1;Name=WP_034194500.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013652.6;locus_tag=LDO38_RS29740;product=DUF4422 domain-containing protein;protein_id=WP_034194500.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 49854 51002 . + . ID=gene-LDO38_RS29745;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=LDO38_RS29745;old_locus_tag=BVI2075_970055 NZ_CAJZAL010000204.1 Protein Homology CDS 49854 51002 . + 0 ID=cds-WP_034194501.1;Parent=gene-LDO38_RS29745;Dbxref=GenBank:WP_034194501.1;Name=WP_034194501.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484978.1;locus_tag=LDO38_RS29745;product=UDP-galactopyranose mutase;protein_id=WP_034194501.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 51054 52013 . - . ID=gene-LDO38_RS29750;Name=LDO38_RS29750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29750;old_locus_tag=BVI2075_970057 NZ_CAJZAL010000204.1 Protein Homology CDS 51054 52013 . - 0 ID=cds-WP_072465536.1;Parent=gene-LDO38_RS29750;Dbxref=GenBank:WP_072465536.1;Name=WP_072465536.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024914.6;locus_tag=LDO38_RS29750;product=CgeB family protein;protein_id=WP_072465536.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 52017 54452 . - . ID=gene-LDO38_RS29755;Name=LDO38_RS29755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29755;old_locus_tag=BVI2075_970058 NZ_CAJZAL010000204.1 Protein Homology CDS 52017 54452 . - 0 ID=cds-WP_224056770.1;Parent=gene-LDO38_RS29755;Dbxref=GenBank:WP_224056770.1;Name=WP_224056770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414633.1;locus_tag=LDO38_RS29755;product=glycosyltransferase family protein;protein_id=WP_224056770.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 54834 55685 . + . ID=gene-LDO38_RS29760;Name=LDO38_RS29760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29760;old_locus_tag=BVI2075_970061 NZ_CAJZAL010000204.1 Protein Homology CDS 54834 55685 . + 0 ID=cds-WP_224056771.1;Parent=gene-LDO38_RS29760;Dbxref=GenBank:WP_224056771.1;Name=WP_224056771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759732.1;locus_tag=LDO38_RS29760;product=glycosyltransferase;protein_id=WP_224056771.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 55682 56647 . + . ID=gene-LDO38_RS29765;Name=LDO38_RS29765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29765;old_locus_tag=BVI2075_970062 NZ_CAJZAL010000204.1 Protein Homology CDS 55682 56647 . + 0 ID=cds-WP_059559037.1;Parent=gene-LDO38_RS29765;Dbxref=GenBank:WP_059559037.1;Name=WP_059559037.1;Ontology_term=GO:0016854;gbkey=CDS;go_function=racemase and epimerase activity|0016854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544758.1;locus_tag=LDO38_RS29765;product=UDP-glucose 4-epimerase family protein;protein_id=WP_059559037.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 56653 57669 . + . ID=gene-LDO38_RS29770;Name=LDO38_RS29770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29770;old_locus_tag=BVI2075_970063 NZ_CAJZAL010000204.1 Protein Homology CDS 56653 57669 . + 0 ID=cds-WP_059695544.1;Parent=gene-LDO38_RS29770;Dbxref=GenBank:WP_059695544.1;Name=WP_059695544.1;Ontology_term=GO:0009252,GO:0016780,GO:0046872;gbkey=CDS;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751083.1;locus_tag=LDO38_RS29770;product=MraY family glycosyltransferase;protein_id=WP_059695544.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 57682 59565 . + . ID=gene-LDO38_RS29775;Name=LDO38_RS29775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29775;old_locus_tag=BVI2075_970064 NZ_CAJZAL010000204.1 Protein Homology CDS 57682 59565 . + 0 ID=cds-WP_034194506.1;Parent=gene-LDO38_RS29775;Dbxref=GenBank:WP_034194506.1;Name=WP_034194506.1;Ontology_term=GO:0000271;gbkey=CDS;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363237.1;locus_tag=LDO38_RS29775;product=polysaccharide biosynthesis protein;protein_id=WP_034194506.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 59658 60764 . - . ID=gene-LDO38_RS29780;Name=LDO38_RS29780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29780;old_locus_tag=BVI2075_970065 NZ_CAJZAL010000204.1 Protein Homology CDS 59658 60764 . - 0 ID=cds-WP_069246153.1;Parent=gene-LDO38_RS29780;Dbxref=GenBank:WP_069246153.1;Name=WP_069246153.1;Ontology_term=GO:0009252,GO:0016780,GO:0046872;gbkey=CDS;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363239.1;locus_tag=LDO38_RS29780;product=MraY family glycosyltransferase;protein_id=WP_069246153.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 60792 61814 . - . ID=gene-LDO38_RS29785;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=LDO38_RS29785;old_locus_tag=BVI2075_970066 NZ_CAJZAL010000204.1 Protein Homology CDS 60792 61814 . - 0 ID=cds-WP_011883551.1;Parent=gene-LDO38_RS29785;Dbxref=GenBank:WP_011883551.1;Name=WP_011883551.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527590.1;locus_tag=LDO38_RS29785;product=UDP-glucose 4-epimerase GalE;protein_id=WP_011883551.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 61829 62965 . - . ID=gene-LDO38_RS29790;Name=LDO38_RS29790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29790;old_locus_tag=BVI2075_970067 NZ_CAJZAL010000204.1 Protein Homology CDS 61829 62965 . - 0 ID=cds-WP_069246154.1;Parent=gene-LDO38_RS29790;Dbxref=GenBank:WP_069246154.1;Name=WP_069246154.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485113.1;locus_tag=LDO38_RS29790;product=glycosyltransferase family 4 protein;protein_id=WP_069246154.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 63007 63831 . - . ID=gene-LDO38_RS29795;Name=LDO38_RS29795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29795;old_locus_tag=BVI2075_970068 NZ_CAJZAL010000204.1 Protein Homology CDS 63007 63831 . - 0 ID=cds-WP_069246155.1;Parent=gene-LDO38_RS29795;Dbxref=GenBank:WP_069246155.1;Name=WP_069246155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889604.1;locus_tag=LDO38_RS29795;product=glycosyltransferase;protein_id=WP_069246155.1;transl_table=11 NZ_CAJZAL010000204.1 RefSeq gene 63828 65096 . - . ID=gene-LDO38_RS29800;Name=LDO38_RS29800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29800;old_locus_tag=BVI2075_970069 NZ_CAJZAL010000204.1 Protein Homology CDS 63828 65096 . - 0 ID=cds-WP_045579390.1;Parent=gene-LDO38_RS29800;Dbxref=GenBank:WP_045579390.1;Name=WP_045579390.1;Ontology_term=GO:0140327,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=flippase activity|0140327||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751076.1;locus_tag=LDO38_RS29800;product=lipopolysaccharide biosynthesis protein;protein_id=WP_045579390.1;transl_table=11 ##sequence-region NZ_CAJZAL010000205.1 1 33673 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000205.1 RefSeq region 1 33673 . + . ID=NZ_CAJZAL010000205.1:1..33673;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_98 NZ_CAJZAL010000205.1 RefSeq gene 89 571 . - . ID=gene-LDO38_RS29805;Name=LDO38_RS29805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29805;old_locus_tag=BVI2075_980001 NZ_CAJZAL010000205.1 Protein Homology CDS 89 571 . - 0 ID=cds-WP_011879870.1;Parent=gene-LDO38_RS29805;Dbxref=GenBank:WP_011879870.1;Name=WP_011879870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553962.1;locus_tag=LDO38_RS29805;product=PRC-barrel domain-containing protein;protein_id=WP_011879870.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 660 1091 . - . ID=gene-LDO38_RS29810;Name=LDO38_RS29810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29810;old_locus_tag=BVI2075_980002 NZ_CAJZAL010000205.1 Protein Homology CDS 660 1091 . - 0 ID=cds-WP_011879871.1;Parent=gene-LDO38_RS29810;Dbxref=GenBank:WP_011879871.1;Name=WP_011879871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523329.1;locus_tag=LDO38_RS29810;product=CBS domain-containing protein;protein_id=WP_011879871.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 1174 1428 . - . ID=gene-LDO38_RS29815;Name=LDO38_RS29815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29815;old_locus_tag=BVI2075_980003 NZ_CAJZAL010000205.1 Protein Homology CDS 1174 1428 . - 0 ID=cds-WP_014725689.1;Parent=gene-LDO38_RS29815;Dbxref=GenBank:WP_014725689.1;Name=WP_014725689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761504.1;locus_tag=LDO38_RS29815;product=hypothetical protein;protein_id=WP_014725689.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 1587 1889 . + . ID=gene-LDO38_RS29820;Name=LDO38_RS29820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29820;old_locus_tag=BVI2075_980004 NZ_CAJZAL010000205.1 Protein Homology CDS 1587 1889 . + 0 ID=cds-WP_011879873.1;Parent=gene-LDO38_RS29820;Dbxref=GenBank:WP_011879873.1;Name=WP_011879873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349707.1;locus_tag=LDO38_RS29820;product=hypothetical protein;protein_id=WP_011879873.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 2124 2381 . + . ID=gene-LDO38_RS29825;Name=LDO38_RS29825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29825;old_locus_tag=BVI2075_980005 NZ_CAJZAL010000205.1 Protein Homology CDS 2124 2381 . + 0 ID=cds-WP_224056772.1;Parent=gene-LDO38_RS29825;Dbxref=GenBank:WP_224056772.1;Name=WP_224056772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398930.1;locus_tag=LDO38_RS29825;product=hypothetical protein;protein_id=WP_224056772.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 2378 2689 . + . ID=gene-LDO38_RS29830;Name=LDO38_RS29830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29830;old_locus_tag=BVI2075_980006 NZ_CAJZAL010000205.1 Protein Homology CDS 2378 2689 . + 0 ID=cds-WP_011879874.1;Parent=gene-LDO38_RS29830;Dbxref=GenBank:WP_011879874.1;Name=WP_011879874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498337.1;locus_tag=LDO38_RS29830;product=hypothetical protein;protein_id=WP_011879874.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 2741 3052 . + . ID=gene-LDO38_RS29835;Name=LDO38_RS29835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29835;old_locus_tag=BVI2075_980007 NZ_CAJZAL010000205.1 Protein Homology CDS 2741 3052 . + 0 ID=cds-WP_011879875.1;Parent=gene-LDO38_RS29835;Dbxref=GenBank:WP_011879875.1;Name=WP_011879875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753985.1;locus_tag=LDO38_RS29835;product=hypothetical protein;protein_id=WP_011879875.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 3544 4977 . + . ID=gene-LDO38_RS29840;Name=LDO38_RS29840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29840;old_locus_tag=BVI2075_980008 NZ_CAJZAL010000205.1 Protein Homology CDS 3544 4977 . + 0 ID=cds-WP_034192846.1;Parent=gene-LDO38_RS29840;Dbxref=GenBank:WP_034192846.1;Name=WP_034192846.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217887.1;locus_tag=LDO38_RS29840;product=RNA polymerase factor sigma-54;protein_id=WP_034192846.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 5048 5236 . + . ID=gene-LDO38_RS29845;Name=LDO38_RS29845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29845;old_locus_tag=BVI2075_980009 NZ_CAJZAL010000205.1 Protein Homology CDS 5048 5236 . + 0 ID=cds-WP_011879877.1;Parent=gene-LDO38_RS29845;Dbxref=GenBank:WP_011879877.1;Name=WP_011879877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009978806.1;locus_tag=LDO38_RS29845;product=DUF3008 family protein;protein_id=WP_011879877.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 5281 5442 . + . ID=gene-LDO38_RS29850;Name=LDO38_RS29850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29850;old_locus_tag=BVI2075_980010 NZ_CAJZAL010000205.1 Protein Homology CDS 5281 5442 . + 0 ID=cds-WP_034192901.1;Parent=gene-LDO38_RS29850;Dbxref=GenBank:WP_034192901.1;Name=WP_034192901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010120894.1;locus_tag=LDO38_RS29850;product=DUF1328 domain-containing protein;protein_id=WP_034192901.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 5439 5825 . + . ID=gene-LDO38_RS29855;Name=LDO38_RS29855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29855;old_locus_tag=BVI2075_980011 NZ_CAJZAL010000205.1 Protein Homology CDS 5439 5825 . + 0 ID=cds-WP_034192845.1;Parent=gene-LDO38_RS29855;Dbxref=GenBank:WP_034192845.1;Name=WP_034192845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761661.1;locus_tag=LDO38_RS29855;product=DUF3022 domain-containing protein;protein_id=WP_034192845.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 5949 7890 . + . ID=gene-LDO38_RS29860;Name=katE;end_range=7890,.;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=LDO38_RS29860;old_locus_tag=BVI2075_980012;partial=true NZ_CAJZAL010000205.1 Protein Homology CDS 5949 7890 . + 0 ID=cds-WP_435521002.1;Parent=gene-LDO38_RS29860;Dbxref=GenBank:WP_435521002.1;Name=WP_435521002.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;end_range=7890,.;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725696.1;locus_tag=LDO38_RS29860;partial=true;product=catalase HPII;protein_id=WP_435521002.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 7901 8084 . + . ID=gene-LDO38_RS30725;Name=LDO38_RS30725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30725;old_locus_tag=BVI2075_980013;partial=true;start_range=.,7901 NZ_CAJZAL010000205.1 Protein Homology CDS 7901 8084 . + 1 ID=cds-WP_435521003.1;Parent=gene-LDO38_RS30725;Dbxref=GenBank:WP_435521003.1;Name=WP_435521003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009770379.1;locus_tag=LDO38_RS30725;partial=true;product=hypothetical protein;protein_id=WP_435521003.1;start_range=.,7901;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 8144 9190 . + . ID=gene-LDO38_RS29865;Name=LDO38_RS29865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29865;old_locus_tag=BVI2075_980014 NZ_CAJZAL010000205.1 Protein Homology CDS 8144 9190 . + 0 ID=cds-WP_059463679.1;Parent=gene-LDO38_RS29865;Dbxref=GenBank:WP_059463679.1;Name=WP_059463679.1;Ontology_term=GO:0006303,GO:0045027;gbkey=CDS;go_function=DNA end binding|0045027||IEA;go_process=double-strand break repair via nonhomologous end joining|0006303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336620.1;locus_tag=LDO38_RS29865;product=Ku protein;protein_id=WP_059463679.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 9224 12211 . + . ID=gene-LDO38_RS29870;Name=ligD;gbkey=Gene;gene=ligD;gene_biotype=protein_coding;locus_tag=LDO38_RS29870;old_locus_tag=BVI2075_980015 NZ_CAJZAL010000205.1 Protein Homology CDS 9224 12211 . + 0 ID=cds-WP_224056773.1;Parent=gene-LDO38_RS29870;Dbxref=GenBank:WP_224056773.1;Name=WP_224056773.1;Ontology_term=GO:0006303;gbkey=CDS;gene=ligD;go_process=double-strand break repair via nonhomologous end joining|0006303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725698.1;locus_tag=LDO38_RS29870;product=DNA ligase D;protein_id=WP_224056773.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 12217 13539 . - . ID=gene-LDO38_RS29875;Name=LDO38_RS29875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29875;old_locus_tag=BVI2075_980016 NZ_CAJZAL010000205.1 Protein Homology CDS 12217 13539 . - 0 ID=cds-WP_059694099.1;Parent=gene-LDO38_RS29875;Dbxref=GenBank:WP_059694099.1;Name=WP_059694099.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336622.1;locus_tag=LDO38_RS29875;product=cation:proton antiporter;protein_id=WP_059694099.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 13578 13934 . - . ID=gene-LDO38_RS29880;Name=LDO38_RS29880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29880;old_locus_tag=BVI2075_980017 NZ_CAJZAL010000205.1 Protein Homology CDS 13578 13934 . - 0 ID=cds-WP_059463677.1;Parent=gene-LDO38_RS29880;Dbxref=GenBank:WP_059463677.1;Name=WP_059463677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754300.1;locus_tag=LDO38_RS29880;product=DUF3175 domain-containing protein;protein_id=WP_059463677.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 14075 14578 . + . ID=gene-LDO38_RS29885;Name=LDO38_RS29885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29885;old_locus_tag=BVI2075_980018 NZ_CAJZAL010000205.1 Protein Homology CDS 14075 14578 . + 0 ID=cds-WP_224056774.1;Parent=gene-LDO38_RS29885;Dbxref=GenBank:WP_224056774.1;Name=WP_224056774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336624.1;locus_tag=LDO38_RS29885;product=hypothetical protein;protein_id=WP_224056774.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 14682 15047 . + . ID=gene-LDO38_RS29890;Name=LDO38_RS29890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29890;old_locus_tag=BVI2075_980019 NZ_CAJZAL010000205.1 Protein Homology CDS 14682 15047 . + 0 ID=cds-WP_014725702.1;Parent=gene-LDO38_RS29890;Dbxref=GenBank:WP_014725702.1;Name=WP_014725702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879884.1;locus_tag=LDO38_RS29890;product=DUF3022 domain-containing protein;protein_id=WP_014725702.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 15274 15822 . + . ID=gene-LDO38_RS29895;Name=LDO38_RS29895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29895;old_locus_tag=BVI2075_980020 NZ_CAJZAL010000205.1 Protein Homology CDS 15274 15822 . + 0 ID=cds-WP_014725703.1;Parent=gene-LDO38_RS29895;Dbxref=GenBank:WP_014725703.1;Name=WP_014725703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660511.1;locus_tag=LDO38_RS29895;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_014725703.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 15826 16164 . + . ID=gene-LDO38_RS29900;Name=LDO38_RS29900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29900;old_locus_tag=BVI2075_980021 NZ_CAJZAL010000205.1 Protein Homology CDS 15826 16164 . + 0 ID=cds-WP_060081425.1;Parent=gene-LDO38_RS29900;Dbxref=GenBank:WP_060081425.1;Name=WP_060081425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879886.1;locus_tag=LDO38_RS29900;product=DUF1488 domain-containing protein;protein_id=WP_060081425.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 16446 16670 . + . ID=gene-LDO38_RS29905;Name=LDO38_RS29905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29905;old_locus_tag=BVI2075_980022 NZ_CAJZAL010000205.1 Protein Homology CDS 16446 16670 . + 0 ID=cds-WP_011879887.1;Parent=gene-LDO38_RS29905;Dbxref=GenBank:WP_011879887.1;Name=WP_011879887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725705.1;locus_tag=LDO38_RS29905;product=hypothetical protein;protein_id=WP_011879887.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 16701 17951 . - . ID=gene-LDO38_RS29910;Name=LDO38_RS29910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29910;old_locus_tag=BVI2075_980023 NZ_CAJZAL010000205.1 Protein Homology CDS 16701 17951 . - 0 ID=cds-WP_176315246.1;Parent=gene-LDO38_RS29910;Dbxref=GenBank:WP_176315246.1;Name=WP_176315246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398950.1;locus_tag=LDO38_RS29910;product=phosphatidylserine decarboxylase family protein;protein_id=WP_176315246.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 18071 18322 . + . ID=gene-LDO38_RS29915;Name=LDO38_RS29915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29915;old_locus_tag=BVI2075_980024 NZ_CAJZAL010000205.1 Protein Homology CDS 18071 18322 . + 0 ID=cds-WP_034192837.1;Parent=gene-LDO38_RS29915;Dbxref=GenBank:WP_034192837.1;Name=WP_034192837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879889.1;locus_tag=LDO38_RS29915;product=hypothetical protein;protein_id=WP_034192837.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 18549 21290 . + . ID=gene-LDO38_RS29920;Name=LDO38_RS29920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29920;old_locus_tag=BVI2075_980025 NZ_CAJZAL010000205.1 Protein Homology CDS 18549 21290 . + 0 ID=cds-WP_224056775.1;Parent=gene-LDO38_RS29920;Dbxref=GenBank:WP_224056775.1;Name=WP_224056775.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879890.1;locus_tag=LDO38_RS29920;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_224056775.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 21333 22178 . - . ID=gene-LDO38_RS29925;Name=LDO38_RS29925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29925;old_locus_tag=BVI2075_980026 NZ_CAJZAL010000205.1 Protein Homology CDS 21333 22178 . - 0 ID=cds-WP_050991251.1;Parent=gene-LDO38_RS29925;Dbxref=GenBank:WP_050991251.1;Name=WP_050991251.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.6;locus_tag=LDO38_RS29925;product=MFS transporter;protein_id=WP_050991251.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 22575 23975 . - . ID=gene-LDO38_RS29930;Name=LDO38_RS29930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29930;old_locus_tag=BVI2075_980028 NZ_CAJZAL010000205.1 Protein Homology CDS 22575 23975 . - 0 ID=cds-WP_224056776.1;Parent=gene-LDO38_RS29930;Dbxref=GenBank:WP_224056776.1;Name=WP_224056776.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725710.1;locus_tag=LDO38_RS29930;product=APC family permease;protein_id=WP_224056776.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 24023 25612 . - . ID=gene-LDO38_RS29935;Name=LDO38_RS29935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29935;old_locus_tag=BVI2075_980029 NZ_CAJZAL010000205.1 Protein Homology CDS 24023 25612 . - 0 ID=cds-WP_224056777.1;Parent=gene-LDO38_RS29935;Dbxref=GenBank:WP_224056777.1;Name=WP_224056777.1;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725711.1;locus_tag=LDO38_RS29935;product=carboxylesterase/lipase family protein;protein_id=WP_224056777.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 25752 26348 . + . ID=gene-LDO38_RS29940;Name=LDO38_RS29940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29940;old_locus_tag=BVI2075_980030 NZ_CAJZAL010000205.1 Protein Homology CDS 25752 26348 . + 0 ID=cds-WP_224056778.1;Parent=gene-LDO38_RS29940;Dbxref=GenBank:WP_224056778.1;Name=WP_224056778.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725712.1;locus_tag=LDO38_RS29940;product=TetR/AcrR family transcriptional regulator;protein_id=WP_224056778.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 26461 27582 . - . ID=gene-LDO38_RS29945;Name=LDO38_RS29945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29945;old_locus_tag=BVI2075_980031 NZ_CAJZAL010000205.1 Protein Homology CDS 26461 27582 . - 0 ID=cds-WP_034192834.1;Parent=gene-LDO38_RS29945;Dbxref=GenBank:WP_034192834.1;Name=WP_034192834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879944.1;locus_tag=LDO38_RS29945;product=sensor histidine kinase;protein_id=WP_034192834.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 28512 30485 . + . ID=gene-LDO38_RS29950;Name=LDO38_RS29950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29950;old_locus_tag=BVI2075_980033 NZ_CAJZAL010000205.1 Protein Homology CDS 28512 30485 . + 0 ID=cds-WP_059897206.1;Parent=gene-LDO38_RS29950;Dbxref=GenBank:WP_059897206.1;Name=WP_059897206.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015210.6;locus_tag=LDO38_RS29950;product=DUF262 domain-containing protein;protein_id=WP_059897206.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 30616 33381 . - . ID=gene-LDO38_RS29955;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=LDO38_RS29955;old_locus_tag=BVI2075_980034 NZ_CAJZAL010000205.1 Protein Homology CDS 30616 33381 . - 0 ID=cds-WP_224056779.1;Parent=gene-LDO38_RS29955;Dbxref=GenBank:WP_224056779.1;Name=WP_224056779.1;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725714.1;locus_tag=LDO38_RS29955;product=malto-oligosyltrehalose synthase;protein_id=WP_224056779.1;transl_table=11 NZ_CAJZAL010000205.1 RefSeq gene 33378 33673 . - . ID=gene-LDO38_RS29960;Name=LDO38_RS29960;end_range=33673,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29960;old_locus_tag=BVI2075_980035;partial=true NZ_CAJZAL010000205.1 Protein Homology CDS 33378 33673 . - 2 ID=cds-WP_224056780.1;Parent=gene-LDO38_RS29960;Dbxref=GenBank:WP_224056780.1;Name=WP_224056780.1;Ontology_term=GO:0005975,GO:0004134;end_range=33673,.;gbkey=CDS;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660501.1;locus_tag=LDO38_RS29960;partial=true;product=4-alpha-glucanotransferase;protein_id=WP_224056780.1;transl_table=11 ##sequence-region NZ_CAJZAL010000206.1 1 17084 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=60552 NZ_CAJZAL010000206.1 RefSeq region 1 17084 . + . ID=NZ_CAJZAL010000206.1:1..17084;Dbxref=taxon:60552;gbkey=Src;genome=genomic;isolate=BVI2075;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BVI2075_Contig_99 NZ_CAJZAL010000206.1 RefSeq gene 1 2893 . - . ID=gene-LDO38_RS29965;Name=LDO38_RS29965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29965;partial=true;start_range=.,1 NZ_CAJZAL010000206.1 Protein Homology CDS 1 2893 . - 0 ID=cds-WP_224056781.1;Parent=gene-LDO38_RS29965;Dbxref=GenBank:WP_224056781.1;Name=WP_224056781.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406970.1;locus_tag=LDO38_RS29965;partial=true;product=type VI secretion system Vgr family protein;protein_id=WP_224056781.1;start_range=.,1;transl_table=11 NZ_CAJZAL010000206.1 RefSeq gene 2892 3182 . + . ID=gene-LDO38_RS30730;Name=LDO38_RS30730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30730 NZ_CAJZAL010000206.1 GeneMarkS-2+ CDS 2892 3182 . + 0 ID=cds-WP_155753930.1;Parent=gene-LDO38_RS30730;Dbxref=GenBank:WP_155753930.1;Name=WP_155753930.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS30730;product=hypothetical protein;protein_id=WP_155753930.1;transl_table=11 NZ_CAJZAL010000206.1 RefSeq gene 3208 4008 . + . ID=gene-LDO38_RS29970;Name=LDO38_RS29970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29970;old_locus_tag=BVI2075_990002 NZ_CAJZAL010000206.1 Protein Homology CDS 3208 4008 . + 0 ID=cds-WP_014722334.1;Parent=gene-LDO38_RS29970;Dbxref=GenBank:WP_014722334.1;Name=WP_014722334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765337.1;locus_tag=LDO38_RS29970;product=transporter substrate-binding domain-containing protein;protein_id=WP_014722334.1;transl_table=11 NZ_CAJZAL010000206.1 RefSeq gene 4376 5029 . + . ID=gene-LDO38_RS29975;Name=LDO38_RS29975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29975;old_locus_tag=BVI2075_990004 NZ_CAJZAL010000206.1 GeneMarkS-2+ CDS 4376 5029 . + 0 ID=cds-WP_155416771.1;Parent=gene-LDO38_RS29975;Dbxref=GenBank:WP_155416771.1;Name=WP_155416771.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO38_RS29975;product=hypothetical protein;protein_id=WP_155416771.1;transl_table=11 NZ_CAJZAL010000206.1 RefSeq gene 5710 6843 . - . ID=gene-LDO38_RS29980;Name=mcrC;gbkey=Gene;gene=mcrC;gene_biotype=protein_coding;locus_tag=LDO38_RS29980;old_locus_tag=BVI2075_990006 NZ_CAJZAL010000206.1 Protein Homology CDS 5710 6843 . - 0 ID=cds-WP_059460813.1;Parent=gene-LDO38_RS29980;Dbxref=GenBank:WP_059460813.1;Name=WP_059460813.1;Ontology_term=GO:0009307;gbkey=CDS;gene=mcrC;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016445642.1;locus_tag=LDO38_RS29980;product=5-methylcytosine-specific restriction endonuclease system specificity protein McrC;protein_id=WP_059460813.1;transl_table=11 NZ_CAJZAL010000206.1 RefSeq gene 6840 8675 . - . ID=gene-LDO38_RS29985;Name=LDO38_RS29985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29985;old_locus_tag=BVI2075_990007 NZ_CAJZAL010000206.1 Protein Homology CDS 6840 8675 . - 0 ID=cds-WP_081055528.1;Parent=gene-LDO38_RS29985;Dbxref=GenBank:WP_081055528.1;Name=WP_081055528.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004545940.1;locus_tag=LDO38_RS29985;product=AAA family ATPase;protein_id=WP_081055528.1;transl_table=11 NZ_CAJZAL010000206.1 RefSeq gene 8759 9475 . - . ID=gene-LDO38_RS29990;Name=LDO38_RS29990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29990;old_locus_tag=BVI2075_990008 NZ_CAJZAL010000206.1 Protein Homology CDS 8759 9475 . - 0 ID=cds-WP_059460823.1;Parent=gene-LDO38_RS29990;Dbxref=GenBank:WP_059460823.1;Name=WP_059460823.1;Ontology_term=GO:0006508,GO:0008233,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=peptidase activity|0008233||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015014517.1;locus_tag=LDO38_RS29990;product=M48 family metallopeptidase;protein_id=WP_059460823.1;transl_table=11 NZ_CAJZAL010000206.1 RefSeq gene 9484 12570 . - . ID=gene-LDO38_RS29995;Name=LDO38_RS29995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS29995;old_locus_tag=BVI2075_990009 NZ_CAJZAL010000206.1 Protein Homology CDS 9484 12570 . - 0 ID=cds-WP_059460815.1;Parent=gene-LDO38_RS29995;Dbxref=GenBank:WP_059460815.1;Name=WP_059460815.1;Ontology_term=GO:0009307,GO:0003677,GO:0004386,GO:0005524,GO:0009035,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,type I site-specific deoxyribonuclease activity|0009035||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004545946.1;locus_tag=LDO38_RS29995;product=type I restriction endonuclease subunit R;protein_id=WP_059460815.1;transl_table=11 NZ_CAJZAL010000206.1 RefSeq gene 12580 13779 . - . ID=gene-LDO38_RS30000;Name=LDO38_RS30000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30000 NZ_CAJZAL010000206.1 Protein Homology CDS 12580 13779 . - 0 ID=cds-WP_081055530.1;Parent=gene-LDO38_RS30000;Dbxref=GenBank:WP_081055530.1;Name=WP_081055530.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.6;locus_tag=LDO38_RS30000;product=restriction endonuclease subunit S;protein_id=WP_081055530.1;transl_table=11 NZ_CAJZAL010000206.1 RefSeq gene 13770 16193 . - . ID=gene-LDO38_RS30005;Name=LDO38_RS30005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30005;old_locus_tag=BVI2075_990011 NZ_CAJZAL010000206.1 Protein Homology CDS 13770 16193 . - 0 ID=cds-WP_059460817.1;Parent=gene-LDO38_RS30005;Dbxref=GenBank:WP_059460817.1;Name=WP_059460817.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015014522.1;locus_tag=LDO38_RS30005;product=type I restriction-modification system subunit M;protein_id=WP_059460817.1;transl_table=11 NZ_CAJZAL010000206.1 RefSeq gene 16341 16763 . + . ID=gene-LDO38_RS30010;Name=LDO38_RS30010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO38_RS30010;old_locus_tag=BVI2075_990013 NZ_CAJZAL010000206.1 Protein Homology CDS 16341 16763 . + 0 ID=cds-WP_224056782.1;Parent=gene-LDO38_RS30010;Dbxref=GenBank:WP_224056782.1;Name=WP_224056782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492479.1;locus_tag=LDO38_RS30010;product=complement resistance protein TraT;protein_id=WP_224056782.1;transl_table=11 NZ_CAJZAL010000206.1 RefSeq pseudogene 16846 17084 . + . ID=gene-LDO38_RS30015;Name=LDO38_RS30015;end_range=17084,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO38_RS30015;partial=true;pseudo=true NZ_CAJZAL010000206.1 Protein Homology CDS 16846 17084 . + 0 ID=cds-LDO38_RS30015;Parent=gene-LDO38_RS30015;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=17084,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008352262.1;locus_tag=LDO38_RS30015;partial=true;product=DUF932 domain-containing protein;pseudo=true;transl_table=11 ###