##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM2491865v1 #!genome-build-accession NCBI_Assembly:GCF_024918655.1 #!annotation-date 12/18/2024 02:39:53 #!annotation-source NCBI RefSeq GCF_024918655.1-RS_2024_12_18 ##sequence-region NZ_CP103431.1 1 1996490 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=777 NZ_CP103431.1 RefSeq region 1 1996490 . + . ID=NZ_CP103431.1:1..1996490;Dbxref=taxon:777;Is_circular=true;Name=ANONYMOUS;collection-date=2013;country=Senegal;gbkey=Src;genome=chromosome;mol_type=genomic DNA;nat-host=Tick;strain=CB149 NZ_CP103431.1 RefSeq gene 6 119 . - . ID=gene-NYQ15_RS00005;Name=NYQ15_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00005 NZ_CP103431.1 Protein Homology CDS 6 119 . - 0 ID=cds-WP_005769930.1;Parent=gene-NYQ15_RS00005;Dbxref=GenBank:WP_005769930.1;Name=WP_005769930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332937.1;locus_tag=NYQ15_RS00005;product=hypothetical protein;protein_id=WP_005769930.1;transl_table=11 NZ_CP103431.1 RefSeq gene 140 1495 . + . ID=gene-NYQ15_RS00010;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=NYQ15_RS00010 NZ_CP103431.1 Protein Homology CDS 140 1495 . + 0 ID=cds-WP_005769932.1;Parent=gene-NYQ15_RS00010;Dbxref=GenBank:WP_005769932.1;Name=WP_005769932.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819057.1;locus_tag=NYQ15_RS00010;product=chromosomal replication initiator protein DnaA;protein_id=WP_005769932.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1639 2748 . + . ID=gene-NYQ15_RS00015;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=NYQ15_RS00015 NZ_CP103431.1 Protein Homology CDS 1639 2748 . + 0 ID=cds-WP_005769934.1;Parent=gene-NYQ15_RS00015;Dbxref=GenBank:WP_005769934.1;Name=WP_005769934.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819058.1;locus_tag=NYQ15_RS00015;product=DNA polymerase III subunit beta;protein_id=WP_005769934.1;transl_table=11 NZ_CP103431.1 RefSeq gene 2753 3826 . + . ID=gene-NYQ15_RS00020;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=NYQ15_RS00020 NZ_CP103431.1 Protein Homology CDS 2753 3826 . + 0 ID=cds-WP_005773024.1;Parent=gene-NYQ15_RS00020;Dbxref=GenBank:WP_005773024.1;Name=WP_005773024.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819059.2;locus_tag=NYQ15_RS00020;product=DNA replication/repair protein RecF;protein_id=WP_005773024.1;transl_table=11 NZ_CP103431.1 RefSeq gene 4128 6554 . + . ID=gene-NYQ15_RS00025;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=NYQ15_RS00025 NZ_CP103431.1 Protein Homology CDS 4128 6554 . + 0 ID=cds-WP_005769938.1;Parent=gene-NYQ15_RS00025;Dbxref=GenBank:WP_005769938.1;Name=WP_005769938.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819060.3;locus_tag=NYQ15_RS00025;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_005769938.1;transl_table=11 NZ_CP103431.1 RefSeq gene 8186 8398 . - . ID=gene-NYQ15_RS00030;Name=NYQ15_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00030 NZ_CP103431.1 Protein Homology CDS 8186 8398 . - 0 ID=cds-WP_032074763.1;Parent=gene-NYQ15_RS00030;Dbxref=GenBank:WP_032074763.1;Name=WP_032074763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819063.1;locus_tag=NYQ15_RS00030;product=BrnA antitoxin family protein;protein_id=WP_032074763.1;transl_table=11 NZ_CP103431.1 RefSeq gene 8395 8688 . - . ID=gene-NYQ15_RS00035;Name=NYQ15_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00035 NZ_CP103431.1 Protein Homology CDS 8395 8688 . - 0 ID=cds-WP_005772654.1;Parent=gene-NYQ15_RS00035;Dbxref=GenBank:WP_005772654.1;Name=WP_005772654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332939.1;locus_tag=NYQ15_RS00035;product=BrnT family toxin;protein_id=WP_005772654.1;transl_table=11 NZ_CP103431.1 RefSeq gene 8716 8904 . + . ID=gene-NYQ15_RS00040;Name=NYQ15_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00040 NZ_CP103431.1 Protein Homology CDS 8716 8904 . + 0 ID=cds-WP_010957321.1;Parent=gene-NYQ15_RS00040;Dbxref=GenBank:WP_010957321.1;Name=WP_010957321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819064.1;locus_tag=NYQ15_RS00040;product=hypothetical protein;protein_id=WP_010957321.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 9006 9560 . + . ID=gene-NYQ15_RS00045;Name=NYQ15_RS00045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS00045;pseudo=true NZ_CP103431.1 Protein Homology CDS 9006 9560 . + 0 ID=cds-NYQ15_RS00045;Parent=gene-NYQ15_RS00045;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332940.1;locus_tag=NYQ15_RS00045;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 9560 10993 . + . ID=gene-NYQ15_RS00050;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=NYQ15_RS00050 NZ_CP103431.1 Protein Homology CDS 9560 10993 . + 0 ID=cds-WP_005770325.1;Parent=gene-NYQ15_RS00050;Dbxref=GenBank:WP_005770325.1;Name=WP_005770325.1;Ontology_term=GO:0009252,GO:0004175,GO:0009002;gbkey=CDS;gene=dacB;go_function=endopeptidase activity|0004175||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819065.1;locus_tag=NYQ15_RS00050;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase;protein_id=WP_005770325.1;transl_table=11 NZ_CP103431.1 RefSeq gene 10986 11804 . + . ID=gene-NYQ15_RS00055;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=NYQ15_RS00055 NZ_CP103431.1 Protein Homology CDS 10986 11804 . + 0 ID=cds-WP_005770326.1;Parent=gene-NYQ15_RS00055;Dbxref=GenBank:WP_005770326.1;Name=WP_005770326.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819066.1;locus_tag=NYQ15_RS00055;product=shikimate dehydrogenase;protein_id=WP_005770326.1;transl_table=11 NZ_CP103431.1 RefSeq gene 11894 11998 . + . ID=gene-NYQ15_RS00060;Name=NYQ15_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00060 NZ_CP103431.1 Protein Homology CDS 11894 11998 . + 0 ID=cds-WP_010957325.1;Parent=gene-NYQ15_RS00060;Dbxref=GenBank:WP_010957325.1;Name=WP_010957325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819067.1;locus_tag=NYQ15_RS00060;product=hypothetical protein;protein_id=WP_010957325.1;transl_table=11 NZ_CP103431.1 RefSeq gene 12151 12960 . - . ID=gene-NYQ15_RS00065;Name=NYQ15_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00065 NZ_CP103431.1 Protein Homology CDS 12151 12960 . - 0 ID=cds-WP_005770328.1;Parent=gene-NYQ15_RS00065;Dbxref=GenBank:WP_005770328.1;Name=WP_005770328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220886.1;locus_tag=NYQ15_RS00065;product=COXBURSA331_A2190 family Dot/Icm T4SS effector;protein_id=WP_005770328.1;transl_table=11 NZ_CP103431.1 RefSeq gene 13228 14481 . - . ID=gene-NYQ15_RS00070;Name=NYQ15_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00070 NZ_CP103431.1 Protein Homology CDS 13228 14481 . - 0 ID=cds-WP_005772656.1;Parent=gene-NYQ15_RS00070;Dbxref=GenBank:WP_005772656.1;Name=WP_005772656.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819070.1;locus_tag=NYQ15_RS00070;product=inorganic phosphate transporter;protein_id=WP_005772656.1;transl_table=11 NZ_CP103431.1 RefSeq gene 14594 15274 . + . ID=gene-NYQ15_RS00075;Name=NYQ15_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00075 NZ_CP103431.1 Protein Homology CDS 14594 15274 . + 0 ID=cds-WP_005770330.1;Parent=gene-NYQ15_RS00075;Dbxref=GenBank:WP_005770330.1;Name=WP_005770330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770330.1;locus_tag=NYQ15_RS00075;product=TIGR00153 family protein;protein_id=WP_005770330.1;transl_table=11 NZ_CP103431.1 RefSeq gene 15276 16097 . + . ID=gene-NYQ15_RS00080;Name=NYQ15_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00080 NZ_CP103431.1 Protein Homology CDS 15276 16097 . + 0 ID=cds-WP_005770332.1;Parent=gene-NYQ15_RS00080;Dbxref=GenBank:WP_005770332.1;Name=WP_005770332.1;Ontology_term=GO:0009116,GO:0004731;gbkey=CDS;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819072.1;locus_tag=NYQ15_RS00080;product=purine-nucleoside phosphorylase;protein_id=WP_005770332.1;transl_table=11 NZ_CP103431.1 RefSeq gene 16094 16819 . + . ID=gene-NYQ15_RS00085;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=NYQ15_RS00085 NZ_CP103431.1 Protein Homology CDS 16094 16819 . + 0 ID=cds-WP_005770334.1;Parent=gene-NYQ15_RS00085;Dbxref=GenBank:WP_005770334.1;Name=WP_005770334.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819073.1;locus_tag=NYQ15_RS00085;product=deoxyribose-phosphate aldolase;protein_id=WP_005770334.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 16903 17340 . + . ID=gene-NYQ15_RS00090;Name=NYQ15_RS00090;end_range=17340,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS00090;partial=true;pseudo=true NZ_CP103431.1 Protein Homology CDS 16903 17340 . + 0 ID=cds-NYQ15_RS00090;Parent=gene-NYQ15_RS00090;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=17340,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819074.1;locus_tag=NYQ15_RS00090;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 17578 18114 . - . ID=gene-NYQ15_RS00100;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=NYQ15_RS00100 NZ_CP103431.1 Protein Homology CDS 17578 18114 . - 0 ID=cds-WP_005772663.1;Parent=gene-NYQ15_RS00100;Dbxref=GenBank:WP_005772663.1;Name=WP_005772663.1;Ontology_term=GO:0045182,GO:0005840;gbkey=CDS;gene=hpf;go_component=ribosome|0005840||IEA;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770338.1;locus_tag=NYQ15_RS00100;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;protein_id=WP_005772663.1;transl_table=11 NZ_CP103431.1 RefSeq gene 18340 20769 . + . ID=gene-NYQ15_RS00105;Name=cetCb1;gbkey=Gene;gene=cetCb1;gene_biotype=protein_coding;locus_tag=NYQ15_RS00105 NZ_CP103431.1 Protein Homology CDS 18340 20769 . + 0 ID=cds-WP_098953207.1;Parent=gene-NYQ15_RS00105;Dbxref=GenBank:WP_098953207.1;Name=WP_098953207.1;gbkey=CDS;gene=cetCb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819077.1;locus_tag=NYQ15_RS00105;product=Dot/Icm type IV secretion system effector CetCb1;protein_id=WP_098953207.1;transl_table=11 NZ_CP103431.1 RefSeq gene 21007 21816 . + . ID=gene-NYQ15_RS00110;Name=NYQ15_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00110 NZ_CP103431.1 Protein Homology CDS 21007 21816 . + 0 ID=cds-WP_005770342.1;Parent=gene-NYQ15_RS00110;Dbxref=GenBank:WP_005770342.1;Name=WP_005770342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819078.1;locus_tag=NYQ15_RS00110;product=hypothetical protein;protein_id=WP_005770342.1;transl_table=11 NZ_CP103431.1 RefSeq gene 21822 22334 . - . ID=gene-NYQ15_RS00115;Name=NYQ15_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00115 NZ_CP103431.1 Protein Homology CDS 21822 22334 . - 0 ID=cds-WP_011996433.1;Parent=gene-NYQ15_RS00115;Dbxref=GenBank:WP_011996433.1;Name=WP_011996433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819079.2;locus_tag=NYQ15_RS00115;product=hypothetical protein;protein_id=WP_011996433.1;transl_table=11 NZ_CP103431.1 RefSeq gene 22462 22668 . - . ID=gene-NYQ15_RS00120;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=NYQ15_RS00120 NZ_CP103431.1 Protein Homology CDS 22462 22668 . - 0 ID=cds-WP_005770346.1;Parent=gene-NYQ15_RS00120;Dbxref=GenBank:WP_005770346.1;Name=WP_005770346.1;Ontology_term=GO:0006109,GO:0006402,GO:0003723;gbkey=CDS;gene=csrA;go_function=RNA binding|0003723||IEA;go_process=regulation of carbohydrate metabolic process|0006109||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819080.1;locus_tag=NYQ15_RS00120;product=carbon storage regulator CsrA;protein_id=WP_005770346.1;transl_table=11 NZ_CP103431.1 RefSeq gene 22764 22886 . - . ID=gene-NYQ15_RS00125;Name=NYQ15_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00125 NZ_CP103431.1 Protein Homology CDS 22764 22886 . - 0 ID=cds-WP_005772657.1;Parent=gene-NYQ15_RS00125;Dbxref=GenBank:WP_005772657.1;Name=WP_005772657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819081.1;locus_tag=NYQ15_RS00125;product=hypothetical protein;protein_id=WP_005772657.1;transl_table=11 NZ_CP103431.1 RefSeq gene 23033 23695 . - . ID=gene-NYQ15_RS00130;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=NYQ15_RS00130 NZ_CP103431.1 Protein Homology CDS 23033 23695 . - 0 ID=cds-WP_005770348.1;Parent=gene-NYQ15_RS00130;Dbxref=GenBank:WP_005770348.1;Name=WP_005770348.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819082.1;locus_tag=NYQ15_RS00130;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_005770348.1;transl_table=11 NZ_CP103431.1 RefSeq gene 23837 24727 . - . ID=gene-NYQ15_RS00135;Name=NYQ15_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00135 NZ_CP103431.1 Protein Homology CDS 23837 24727 . - 0 ID=cds-WP_005770350.1;Parent=gene-NYQ15_RS00135;Dbxref=GenBank:WP_005770350.1;Name=WP_005770350.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819083.1;locus_tag=NYQ15_RS00135;product=acyltransferase;protein_id=WP_005770350.1;transl_table=11 NZ_CP103431.1 RefSeq gene 24724 26439 . - . ID=gene-NYQ15_RS00140;Name=NYQ15_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00140 NZ_CP103431.1 Protein Homology CDS 24724 26439 . - 0 ID=cds-WP_259430996.1;Parent=gene-NYQ15_RS00140;Dbxref=GenBank:WP_259430996.1;Name=WP_259430996.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569695.1;locus_tag=NYQ15_RS00140;product=FAD-binding oxidoreductase;protein_id=WP_259430996.1;transl_table=11 NZ_CP103431.1 RefSeq gene 26406 27104 . - . ID=gene-NYQ15_RS00145;Name=NYQ15_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00145 NZ_CP103431.1 Protein Homology CDS 26406 27104 . - 0 ID=cds-WP_259430997.1;Parent=gene-NYQ15_RS00145;Dbxref=GenBank:WP_259430997.1;Name=WP_259430997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819084.2;locus_tag=NYQ15_RS00145;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=WP_259430997.1;transl_table=11 NZ_CP103431.1 RefSeq gene 27091 28278 . - . ID=gene-NYQ15_RS00150;Name=NYQ15_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00150 NZ_CP103431.1 Protein Homology CDS 27091 28278 . - 0 ID=cds-WP_005770356.1;Parent=gene-NYQ15_RS00150;Dbxref=GenBank:WP_005770356.1;Name=WP_005770356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819085.1;locus_tag=NYQ15_RS00150;product=hydroxymethylglutaryl-CoA reductase;protein_id=WP_005770356.1;transl_table=11 NZ_CP103431.1 RefSeq gene 28377 29315 . - . ID=gene-NYQ15_RS00155;Name=NYQ15_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00155 NZ_CP103431.1 Protein Homology CDS 28377 29315 . - 0 ID=cds-WP_098953209.1;Parent=gene-NYQ15_RS00155;Dbxref=GenBank:WP_098953209.1;Name=WP_098953209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819086.1;locus_tag=NYQ15_RS00155;product=SDR family oxidoreductase;protein_id=WP_098953209.1;transl_table=11 NZ_CP103431.1 RefSeq gene 29918 30619 . - . ID=gene-NYQ15_RS00165;Name=NYQ15_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00165 NZ_CP103431.1 Protein Homology CDS 29918 30619 . - 0 ID=cds-WP_005770360.1;Parent=gene-NYQ15_RS00165;Dbxref=GenBank:WP_005770360.1;Name=WP_005770360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819088.1;locus_tag=NYQ15_RS00165;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=WP_005770360.1;transl_table=11 NZ_CP103431.1 RefSeq gene 30623 30883 . - . ID=gene-NYQ15_RS00170;Name=NYQ15_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00170 NZ_CP103431.1 Protein Homology CDS 30623 30883 . - 0 ID=cds-WP_005770362.1;Parent=gene-NYQ15_RS00170;Dbxref=GenBank:WP_005770362.1;Name=WP_005770362.1;Ontology_term=GO:0009245,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819089.1;locus_tag=NYQ15_RS00170;product=acyl carrier protein;protein_id=WP_005770362.1;transl_table=11 NZ_CP103431.1 RefSeq gene 30906 32180 . - . ID=gene-NYQ15_RS00175;Name=NYQ15_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00175 NZ_CP103431.1 Protein Homology CDS 30906 32180 . - 0 ID=cds-WP_005770365.1;Parent=gene-NYQ15_RS00175;Dbxref=GenBank:WP_005770365.1;Name=WP_005770365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819090.1;locus_tag=NYQ15_RS00175;product=beta-ketoacyl synthase;protein_id=WP_005770365.1;transl_table=11 NZ_CP103431.1 RefSeq gene 32177 32656 . - . ID=gene-NYQ15_RS00180;Name=NYQ15_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00180 NZ_CP103431.1 Protein Homology CDS 32177 32656 . - 0 ID=cds-WP_005770367.1;Parent=gene-NYQ15_RS00180;Dbxref=GenBank:WP_005770367.1;Name=WP_005770367.1;Ontology_term=GO:0006633,GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819091.1;locus_tag=NYQ15_RS00180;product=3-hydroxyacyl-ACP dehydratase FabZ family protein;protein_id=WP_005770367.1;transl_table=11 NZ_CP103431.1 RefSeq gene 32660 33277 . - . ID=gene-NYQ15_RS00185;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=NYQ15_RS00185 NZ_CP103431.1 Protein Homology CDS 32660 33277 . - 0 ID=cds-WP_005770369.1;Parent=gene-NYQ15_RS00185;Dbxref=GenBank:WP_005770369.1;Name=WP_005770369.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819092.2;locus_tag=NYQ15_RS00185;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_005770369.1;transl_table=11 NZ_CP103431.1 RefSeq gene 33475 34458 . - . ID=gene-NYQ15_RS00190;Name=NYQ15_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00190 NZ_CP103431.1 Protein Homology CDS 33475 34458 . - 0 ID=cds-WP_098953211.1;Parent=gene-NYQ15_RS00190;Dbxref=GenBank:WP_098953211.1;Name=WP_098953211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819093.1;locus_tag=NYQ15_RS00190;product=ketoacyl-ACP synthase III;protein_id=WP_098953211.1;transl_table=11 NZ_CP103431.1 RefSeq gene 34539 36572 . - . ID=gene-NYQ15_RS00195;Name=NYQ15_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00195 NZ_CP103431.1 Protein Homology CDS 34539 36572 . - 0 ID=cds-WP_098953212.1;Parent=gene-NYQ15_RS00195;Dbxref=GenBank:WP_098953212.1;Name=WP_098953212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819094.1;locus_tag=NYQ15_RS00195;product=M3 family metallopeptidase;protein_id=WP_098953212.1;transl_table=11 NZ_CP103431.1 RefSeq gene 38093 40225 . - . ID=gene-NYQ15_RS00200;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=NYQ15_RS00200 NZ_CP103431.1 Protein Homology CDS 38093 40225 . - 0 ID=cds-WP_032075233.1;Parent=gene-NYQ15_RS00200;Dbxref=GenBank:WP_032075233.1;Name=WP_032075233.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819096.1;locus_tag=NYQ15_RS00200;product=Dot/Icm T4SS effector CirA;protein_id=WP_032075233.1;transl_table=11 NZ_CP103431.1 RefSeq gene 40324 41349 . - . ID=gene-NYQ15_RS00205;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=NYQ15_RS00205 NZ_CP103431.1 Protein Homology CDS 40324 41349 . - 0 ID=cds-WP_193742806.1;Parent=gene-NYQ15_RS00205;Dbxref=GenBank:WP_193742806.1;Name=WP_193742806.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220074.1;locus_tag=NYQ15_RS00205;product=ferrochelatase;protein_id=WP_193742806.1;transl_table=11 NZ_CP103431.1 RefSeq gene 41412 42014 . + . ID=gene-NYQ15_RS00210;Name=NYQ15_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00210 NZ_CP103431.1 Protein Homology CDS 41412 42014 . + 0 ID=cds-WP_005769347.1;Parent=gene-NYQ15_RS00210;Dbxref=GenBank:WP_005769347.1;Name=WP_005769347.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819098.1;locus_tag=NYQ15_RS00210;product=XTP/dITP diphosphatase;protein_id=WP_005769347.1;transl_table=11 NZ_CP103431.1 RefSeq gene 42124 42879 . + . ID=gene-NYQ15_RS00215;Name=NYQ15_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00215 NZ_CP103431.1 Protein Homology CDS 42124 42879 . + 0 ID=cds-WP_010957342.1;Parent=gene-NYQ15_RS00215;Dbxref=GenBank:WP_010957342.1;Name=WP_010957342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819099.2;locus_tag=NYQ15_RS00215;product=GIN domain-containing protein;protein_id=WP_010957342.1;transl_table=11 NZ_CP103431.1 RefSeq gene 42976 43536 . - . ID=gene-NYQ15_RS00220;Name=NYQ15_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00220 NZ_CP103431.1 Protein Homology CDS 42976 43536 . - 0 ID=cds-WP_005769342.1;Parent=gene-NYQ15_RS00220;Dbxref=GenBank:WP_005769342.1;Name=WP_005769342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819100.1;locus_tag=NYQ15_RS00220;product=OmpA family protein;protein_id=WP_005769342.1;transl_table=11 NZ_CP103431.1 RefSeq gene 43584 44723 . - . ID=gene-NYQ15_RS00225;Name=NYQ15_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00225 NZ_CP103431.1 Protein Homology CDS 43584 44723 . - 0 ID=cds-WP_259430998.1;Parent=gene-NYQ15_RS00225;Dbxref=GenBank:WP_259430998.1;Name=WP_259430998.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997394.1;locus_tag=NYQ15_RS00225;product=ABC transporter permease;protein_id=WP_259430998.1;transl_table=11 NZ_CP103431.1 RefSeq gene 44713 45642 . - . ID=gene-NYQ15_RS00230;Name=NYQ15_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00230 NZ_CP103431.1 Protein Homology CDS 44713 45642 . - 0 ID=cds-WP_005769338.1;Parent=gene-NYQ15_RS00230;Dbxref=GenBank:WP_005769338.1;Name=WP_005769338.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769338.1;locus_tag=NYQ15_RS00230;product=ABC transporter ATP-binding protein;protein_id=WP_005769338.1;transl_table=11 NZ_CP103431.1 RefSeq gene 45635 46633 . - . ID=gene-NYQ15_RS00235;Name=NYQ15_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00235 NZ_CP103431.1 Protein Homology CDS 45635 46633 . - 0 ID=cds-WP_012570924.1;Parent=gene-NYQ15_RS00235;Dbxref=GenBank:WP_012570924.1;Name=WP_012570924.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819101.2;locus_tag=NYQ15_RS00235;product=HlyD family secretion protein;protein_id=WP_012570924.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 46669 47980 . - . ID=gene-NYQ15_RS00240;Name=NYQ15_RS00240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS00240;pseudo=true NZ_CP103431.1 Protein Homology CDS 46669 47980 . - 0 ID=cds-NYQ15_RS00240;Parent=gene-NYQ15_RS00240;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819102.1;locus_tag=NYQ15_RS00240;product=SPOR domain-containing protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 48173 48775 . - . ID=gene-NYQ15_RS00245;Name=NYQ15_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00245 NZ_CP103431.1 Protein Homology CDS 48173 48775 . - 0 ID=cds-WP_005769332.1;Parent=gene-NYQ15_RS00245;Dbxref=GenBank:WP_005769332.1;Name=WP_005769332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819103.1;locus_tag=NYQ15_RS00245;product=DUF2390 domain-containing protein;protein_id=WP_005769332.1;transl_table=11 NZ_CP103431.1 RefSeq gene 48800 49384 . - . ID=gene-NYQ15_RS00250;Name=NYQ15_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00250 NZ_CP103431.1 Protein Homology CDS 48800 49384 . - 0 ID=cds-WP_010957346.1;Parent=gene-NYQ15_RS00250;Dbxref=GenBank:WP_010957346.1;Name=WP_010957346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819104.2;locus_tag=NYQ15_RS00250;product=hypothetical protein;protein_id=WP_010957346.1;transl_table=11 NZ_CP103431.1 RefSeq gene 49493 50242 . + . ID=gene-NYQ15_RS00255;Name=NYQ15_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00255 NZ_CP103431.1 Protein Homology CDS 49493 50242 . + 0 ID=cds-WP_032075231.1;Parent=gene-NYQ15_RS00255;Dbxref=GenBank:WP_032075231.1;Name=WP_032075231.1;Ontology_term=GO:0042834,GO:0071972;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819106.1;locus_tag=NYQ15_RS00255;product=L%2CD-transpeptidase;protein_id=WP_032075231.1;transl_table=11 NZ_CP103431.1 RefSeq gene 50312 50869 . + . ID=gene-NYQ15_RS00260;Name=NYQ15_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00260 NZ_CP103431.1 Protein Homology CDS 50312 50869 . + 0 ID=cds-WP_005769327.1;Parent=gene-NYQ15_RS00260;Dbxref=GenBank:WP_005769327.1;Name=WP_005769327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819107.1;locus_tag=NYQ15_RS00260;product=chorismate lyase;protein_id=WP_005769327.1;transl_table=11 NZ_CP103431.1 RefSeq gene 50862 51725 . + . ID=gene-NYQ15_RS00265;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=NYQ15_RS00265 NZ_CP103431.1 Protein Homology CDS 50862 51725 . + 0 ID=cds-WP_005772835.1;Parent=gene-NYQ15_RS00265;Dbxref=GenBank:WP_005772835.1;Name=WP_005772835.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819108.1;locus_tag=NYQ15_RS00265;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_005772835.1;transl_table=11 NZ_CP103431.1 RefSeq gene 51837 53687 . + . ID=gene-NYQ15_RS00270;Name=NYQ15_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00270 NZ_CP103431.1 Protein Homology CDS 51837 53687 . + 0 ID=cds-WP_005772836.1;Parent=gene-NYQ15_RS00270;Dbxref=GenBank:WP_005772836.1;Name=WP_005772836.1;Ontology_term=GO:0055085,GO:0015562,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819109.1;locus_tag=NYQ15_RS00270;product=TolC family outer membrane protein;protein_id=WP_005772836.1;transl_table=11 NZ_CP103431.1 RefSeq gene 54241 54600 . + . ID=gene-NYQ15_RS00275;Name=NYQ15_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00275 NZ_CP103431.1 GeneMarkS-2+ CDS 54241 54600 . + 0 ID=cds-WP_012220067.1;Parent=gene-NYQ15_RS00275;Dbxref=GenBank:WP_012220067.1;Name=WP_012220067.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS00275;product=hypothetical protein;protein_id=WP_012220067.1;transl_table=11 NZ_CP103431.1 RefSeq gene 54660 54893 . + . ID=gene-NYQ15_RS00280;Name=NYQ15_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00280 NZ_CP103431.1 GeneMarkS-2+ CDS 54660 54893 . + 0 ID=cds-WP_259430999.1;Parent=gene-NYQ15_RS00280;Dbxref=GenBank:WP_259430999.1;Name=WP_259430999.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS00280;product=hypothetical protein;protein_id=WP_259430999.1;transl_table=11 NZ_CP103431.1 RefSeq gene 54878 55855 . + . ID=gene-NYQ15_RS00285;Name=NYQ15_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00285 NZ_CP103431.1 GeneMarkS-2+ CDS 54878 55855 . + 0 ID=cds-WP_259431000.1;Parent=gene-NYQ15_RS00285;Dbxref=GenBank:WP_259431000.1;Name=WP_259431000.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS00285;product=hypothetical protein;protein_id=WP_259431000.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 55876 57385 . + . ID=gene-NYQ15_RS00290;Name=NYQ15_RS00290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS00290;pseudo=true NZ_CP103431.1 Protein Homology CDS 55876 57385 . + 0 ID=cds-NYQ15_RS00290;Parent=gene-NYQ15_RS00290;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819115.1;locus_tag=NYQ15_RS00290;product=CBU_0062 family Dot/Icm type IV secretion system effector;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 57371 58660 . - . ID=gene-NYQ15_RS00295;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=NYQ15_RS00295 NZ_CP103431.1 Protein Homology CDS 57371 58660 . - 0 ID=cds-WP_259431001.1;Parent=gene-NYQ15_RS00295;Dbxref=GenBank:WP_259431001.1;Name=WP_259431001.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769313.1;locus_tag=NYQ15_RS00295;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_259431001.1;transl_table=11 NZ_CP103431.1 RefSeq gene 58763 60688 . + . ID=gene-NYQ15_RS00300;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=NYQ15_RS00300 NZ_CP103431.1 Protein Homology CDS 58763 60688 . + 0 ID=cds-WP_080735227.1;Parent=gene-NYQ15_RS00300;Dbxref=GenBank:WP_080735227.1;Name=WP_080735227.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819117.2;locus_tag=NYQ15_RS00300;product=DNA topoisomerase IV subunit B;protein_id=WP_080735227.1;transl_table=11 NZ_CP103431.1 RefSeq gene 60877 61251 . + . ID=gene-NYQ15_RS00305;Name=NYQ15_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00305 NZ_CP103431.1 Protein Homology CDS 60877 61251 . + 0 ID=cds-WP_010957355.1;Parent=gene-NYQ15_RS00305;Dbxref=GenBank:WP_010957355.1;Name=WP_010957355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819118.1;locus_tag=NYQ15_RS00305;product=rhodanese-like domain-containing protein;protein_id=WP_010957355.1;transl_table=11 NZ_CP103431.1 RefSeq gene 61302 61646 . + . ID=gene-NYQ15_RS00310;Name=NYQ15_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00310 NZ_CP103431.1 Protein Homology CDS 61302 61646 . + 0 ID=cds-WP_005769309.1;Parent=gene-NYQ15_RS00310;Dbxref=GenBank:WP_005769309.1;Name=WP_005769309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332943.1;locus_tag=NYQ15_RS00310;product=hypothetical protein;protein_id=WP_005769309.1;transl_table=11 NZ_CP103431.1 RefSeq gene 61643 62236 . - . ID=gene-NYQ15_RS00315;Name=NYQ15_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00315 NZ_CP103431.1 Protein Homology CDS 61643 62236 . - 0 ID=cds-WP_010957356.1;Parent=gene-NYQ15_RS00315;Dbxref=GenBank:WP_010957356.1;Name=WP_010957356.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819119.1;locus_tag=NYQ15_RS00315;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_010957356.1;transl_table=11 NZ_CP103431.1 RefSeq gene 62238 62436 . - . ID=gene-NYQ15_RS00320;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=NYQ15_RS00320 NZ_CP103431.1 cmsearch ncRNA 62238 62436 . - . ID=rna-NYQ15_RS00320;Parent=gene-NYQ15_RS00320;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=NYQ15_RS00320;product=6S RNA NZ_CP103431.1 cmsearch exon 62238 62436 . - . ID=exon-NYQ15_RS00320-1;Parent=rna-NYQ15_RS00320;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=NYQ15_RS00320;product=6S RNA NZ_CP103431.1 RefSeq gene 62445 62768 . - . ID=gene-NYQ15_RS00325;Name=NYQ15_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00325 NZ_CP103431.1 Protein Homology CDS 62445 62768 . - 0 ID=cds-WP_005769307.1;Parent=gene-NYQ15_RS00325;Dbxref=GenBank:WP_005769307.1;Name=WP_005769307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819120.1;locus_tag=NYQ15_RS00325;product=cell division protein ZapA;protein_id=WP_005769307.1;transl_table=11 NZ_CP103431.1 RefSeq gene 62765 63004 . - . ID=gene-NYQ15_RS00330;Name=NYQ15_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00330 NZ_CP103431.1 Protein Homology CDS 62765 63004 . - 0 ID=cds-WP_010957358.1;Parent=gene-NYQ15_RS00330;Dbxref=GenBank:WP_010957358.1;Name=WP_010957358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819121.1;locus_tag=NYQ15_RS00330;product=TIGR02449 family protein;protein_id=WP_010957358.1;transl_table=11 NZ_CP103431.1 RefSeq gene 63092 63259 . - . ID=gene-NYQ15_RS00335;Name=NYQ15_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00335 NZ_CP103431.1 Protein Homology CDS 63092 63259 . - 0 ID=cds-WP_259411716.1;Parent=gene-NYQ15_RS00335;Dbxref=GenBank:WP_259411716.1;Name=WP_259411716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332944.1;locus_tag=NYQ15_RS00335;product=hypothetical protein;protein_id=WP_259411716.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 63391 65426 . + . ID=gene-NYQ15_RS00340;Name=ankP;end_range=65426,.;gbkey=Gene;gene=ankP;gene_biotype=pseudogene;locus_tag=NYQ15_RS00340;partial=true;pseudo=true NZ_CP103431.1 Protein Homology CDS 63391 65426 . + 0 ID=cds-NYQ15_RS00340;Parent=gene-NYQ15_RS00340;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=65426,.;gbkey=CDS;gene=ankP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997383.1;locus_tag=NYQ15_RS00340;partial=true;product=ankyrin repeat domain-containing T4SS effector AnkP;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 65621 66820 . + . ID=gene-NYQ15_RS00345;Name=ankA;gbkey=Gene;gene=ankA;gene_biotype=protein_coding;locus_tag=NYQ15_RS00345 NZ_CP103431.1 Protein Homology CDS 65621 66820 . + 0 ID=cds-WP_005769355.1;Parent=gene-NYQ15_RS00345;Dbxref=GenBank:WP_005769355.1;Name=WP_005769355.1;gbkey=CDS;gene=ankA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819125.1;locus_tag=NYQ15_RS00345;product=ankyrin repeat domain-containing T4SS effector AnkA;protein_id=WP_005769355.1;transl_table=11 NZ_CP103431.1 RefSeq gene 66909 68732 . - . ID=gene-NYQ15_RS00350;Name=NYQ15_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00350 NZ_CP103431.1 Protein Homology CDS 66909 68732 . - 0 ID=cds-WP_012570921.1;Parent=gene-NYQ15_RS00350;Dbxref=GenBank:WP_012570921.1;Name=WP_012570921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819126.2;locus_tag=NYQ15_RS00350;product=aminopeptidase P family protein;protein_id=WP_012570921.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 68790 68883 . - . ID=gene-NYQ15_RS10555;Name=NYQ15_RS10555;end_range=68883,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS10555;partial=true;pseudo=true NZ_CP103431.1 Protein Homology CDS 68790 68883 . - 0 ID=cds-NYQ15_RS10555;Parent=gene-NYQ15_RS10555;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=68883,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820826.1;locus_tag=NYQ15_RS10555;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 69010 70242 . + . ID=gene-NYQ15_RS00355;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;locus_tag=NYQ15_RS00355 NZ_CP103431.1 Protein Homology CDS 69010 70242 . + 0 ID=cds-WP_005769361.1;Parent=gene-NYQ15_RS00355;Dbxref=GenBank:WP_005769361.1;Name=WP_005769361.1;Ontology_term=GO:0006744,GO:0008681;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819128.1;locus_tag=NYQ15_RS00355;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_005769361.1;transl_table=11 NZ_CP103431.1 RefSeq gene 70229 71491 . + . ID=gene-NYQ15_RS00360;Name=NYQ15_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00360 NZ_CP103431.1 Protein Homology CDS 70229 71491 . + 0 ID=cds-WP_005772265.1;Parent=gene-NYQ15_RS00360;Dbxref=GenBank:WP_005772265.1;Name=WP_005772265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772265.1;locus_tag=NYQ15_RS00360;product=UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase;protein_id=WP_005772265.1;transl_table=11 NZ_CP103431.1 RefSeq gene 71582 72373 . + . ID=gene-NYQ15_RS00365;Name=mceA;gbkey=Gene;gene=mceA;gene_biotype=protein_coding;locus_tag=NYQ15_RS00365 NZ_CP103431.1 Protein Homology CDS 71582 72373 . + 0 ID=cds-WP_010957363.1;Parent=gene-NYQ15_RS00365;Dbxref=GenBank:WP_010957363.1;Name=WP_010957363.1;gbkey=CDS;gene=mceA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819130.1;locus_tag=NYQ15_RS00365;product=Dot/Icm T4SS effector MceA;protein_id=WP_010957363.1;transl_table=11 NZ_CP103431.1 RefSeq gene 72549 73538 . + . ID=gene-NYQ15_RS00370;Name=NYQ15_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00370 NZ_CP103431.1 Protein Homology CDS 72549 73538 . + 0 ID=cds-WP_259431002.1;Parent=gene-NYQ15_RS00370;Dbxref=GenBank:WP_259431002.1;Name=WP_259431002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769368.1;locus_tag=NYQ15_RS00370;product=CbuK_1976 family Dot/Icm T4SS effector;protein_id=WP_259431002.1;transl_table=11 NZ_CP103431.1 RefSeq gene 73574 75274 . + . ID=gene-NYQ15_RS00375;Name=NYQ15_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00375 NZ_CP103431.1 Protein Homology CDS 73574 75274 . + 0 ID=cds-WP_012570919.1;Parent=gene-NYQ15_RS00375;Dbxref=GenBank:WP_012570919.1;Name=WP_012570919.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA editing activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819134.1;locus_tag=NYQ15_RS00375;product=proline--tRNA ligase;protein_id=WP_012570919.1;transl_table=11 NZ_CP103431.1 RefSeq gene 75271 75513 . + . ID=gene-NYQ15_RS00380;Name=NYQ15_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00380 NZ_CP103431.1 Protein Homology CDS 75271 75513 . + 0 ID=cds-WP_010957365.1;Parent=gene-NYQ15_RS00380;Dbxref=GenBank:WP_010957365.1;Name=WP_010957365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819136.2;locus_tag=NYQ15_RS00380;product=hypothetical protein;protein_id=WP_010957365.1;transl_table=11 NZ_CP103431.1 RefSeq gene 75648 77564 . + . ID=gene-NYQ15_RS00385;Name=NYQ15_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00385 NZ_CP103431.1 Protein Homology CDS 75648 77564 . + 0 ID=cds-WP_010957366.1;Parent=gene-NYQ15_RS00385;Dbxref=GenBank:WP_010957366.1;Name=WP_010957366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819137.1;locus_tag=NYQ15_RS00385;product=DUF3413 domain-containing protein;protein_id=WP_010957366.1;transl_table=11 NZ_CP103431.1 RefSeq gene 77818 77973 . + . ID=gene-NYQ15_RS00390;Name=NYQ15_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00390 NZ_CP103431.1 Protein Homology CDS 77818 77973 . + 0 ID=cds-WP_005769376.1;Parent=gene-NYQ15_RS00390;Dbxref=GenBank:WP_005769376.1;Name=WP_005769376.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819138.1;locus_tag=NYQ15_RS00390;product=entericidin A/B family lipoprotein;protein_id=WP_005769376.1;transl_table=11 NZ_CP103431.1 RefSeq gene 77984 78742 . + . ID=gene-NYQ15_RS00395;Name=NYQ15_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00395 NZ_CP103431.1 Protein Homology CDS 77984 78742 . + 0 ID=cds-WP_005769378.1;Parent=gene-NYQ15_RS00395;Dbxref=GenBank:WP_005769378.1;Name=WP_005769378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819139.1;locus_tag=NYQ15_RS00395;product=amidohydrolase family protein;protein_id=WP_005769378.1;transl_table=11 NZ_CP103431.1 RefSeq gene 78757 80700 . + . ID=gene-NYQ15_RS00400;Name=NYQ15_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00400 NZ_CP103431.1 Protein Homology CDS 78757 80700 . + 0 ID=cds-WP_259431003.1;Parent=gene-NYQ15_RS00400;Dbxref=GenBank:WP_259431003.1;Name=WP_259431003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819140.2;locus_tag=NYQ15_RS00400;product=DUF3413 domain-containing protein;protein_id=WP_259431003.1;transl_table=11 NZ_CP103431.1 RefSeq gene 80869 81684 . + . ID=gene-NYQ15_RS00405;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=NYQ15_RS00405 NZ_CP103431.1 Protein Homology CDS 80869 81684 . + 0 ID=cds-WP_259431004.1;Parent=gene-NYQ15_RS00405;Dbxref=GenBank:WP_259431004.1;Name=WP_259431004.1;Ontology_term=GO:0006810,GO:0005215,GO:0098567;gbkey=CDS;gene=tolA;go_component=periplasmic side of plasma membrane|0098567||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769385.1;locus_tag=NYQ15_RS00405;product=cell envelope integrity protein TolA;protein_id=WP_259431004.1;transl_table=11 NZ_CP103431.1 RefSeq gene 81698 81793 . + . ID=gene-NYQ15_RS00410;Name=NYQ15_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00410 NZ_CP103431.1 Protein Homology CDS 81698 81793 . + 0 ID=cds-WP_010957369.1;Parent=gene-NYQ15_RS00410;Dbxref=GenBank:WP_010957369.1;Name=WP_010957369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819141.1;locus_tag=NYQ15_RS00410;product=hypothetical protein;protein_id=WP_010957369.1;transl_table=11 NZ_CP103431.1 RefSeq gene 81915 82256 . + . ID=gene-NYQ15_RS00415;Name=NYQ15_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00415 NZ_CP103431.1 Protein Homology CDS 81915 82256 . + 0 ID=cds-WP_032075227.1;Parent=gene-NYQ15_RS00415;Dbxref=GenBank:WP_032075227.1;Name=WP_032075227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332945.1;locus_tag=NYQ15_RS00415;product=hypothetical protein;protein_id=WP_032075227.1;transl_table=11 NZ_CP103431.1 RefSeq gene 82495 83817 . + . ID=gene-NYQ15_RS00420;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=NYQ15_RS00420 NZ_CP103431.1 Protein Homology CDS 82495 83817 . + 0 ID=cds-WP_098953097.1;Parent=gene-NYQ15_RS00420;Dbxref=GenBank:WP_098953097.1;Name=WP_098953097.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819142.2;locus_tag=NYQ15_RS00420;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_098953097.1;transl_table=11 NZ_CP103431.1 RefSeq gene 83866 84414 . + . ID=gene-NYQ15_RS00425;Name=NYQ15_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00425 NZ_CP103431.1 Protein Homology CDS 83866 84414 . + 0 ID=cds-WP_005769392.1;Parent=gene-NYQ15_RS00425;Dbxref=GenBank:WP_005769392.1;Name=WP_005769392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769392.1;locus_tag=NYQ15_RS00425;product=OmpA family protein;protein_id=WP_005769392.1;transl_table=11 NZ_CP103431.1 RefSeq gene 84401 85318 . + . ID=gene-NYQ15_RS00430;Name=ybgF;gbkey=Gene;gene=ybgF;gene_biotype=protein_coding;locus_tag=NYQ15_RS00430 NZ_CP103431.1 Protein Homology CDS 84401 85318 . + 0 ID=cds-WP_011997373.1;Parent=gene-NYQ15_RS00430;Dbxref=GenBank:WP_011997373.1;Name=WP_011997373.1;Ontology_term=GO:0005515;gbkey=CDS;gene=ybgF;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819144.2;locus_tag=NYQ15_RS00430;product=tol-pal system protein YbgF;protein_id=WP_011997373.1;transl_table=11 NZ_CP103431.1 RefSeq gene 85321 85962 . + . ID=gene-NYQ15_RS00435;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=NYQ15_RS00435 NZ_CP103431.1 Protein Homology CDS 85321 85962 . + 0 ID=cds-WP_005769397.1;Parent=gene-NYQ15_RS00435;Dbxref=GenBank:WP_005769397.1;Name=WP_005769397.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819145.1;locus_tag=NYQ15_RS00435;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_005769397.1;transl_table=11 NZ_CP103431.1 RefSeq gene 86275 88854 . + . ID=gene-NYQ15_RS00440;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=NYQ15_RS00440 NZ_CP103431.1 Protein Homology CDS 86275 88854 . + 0 ID=cds-WP_259431005.1;Parent=gene-NYQ15_RS00440;Dbxref=GenBank:WP_259431005.1;Name=WP_259431005.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819146.1;locus_tag=NYQ15_RS00440;product=ATP-dependent chaperone ClpB;protein_id=WP_259431005.1;transl_table=11 NZ_CP103431.1 RefSeq gene 88851 89819 . + . ID=gene-NYQ15_RS00445;Name=NYQ15_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00445 NZ_CP103431.1 Protein Homology CDS 88851 89819 . + 0 ID=cds-WP_010957375.1;Parent=gene-NYQ15_RS00445;Dbxref=GenBank:WP_010957375.1;Name=WP_010957375.1;Ontology_term=GO:0098662,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=inorganic cation transmembrane transport|0098662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819147.1;locus_tag=NYQ15_RS00445;product=calcium/sodium antiporter;protein_id=WP_010957375.1;transl_table=11 NZ_CP103431.1 RefSeq gene 89803 90978 . - . ID=gene-NYQ15_RS00450;Name=NYQ15_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00450 NZ_CP103431.1 Protein Homology CDS 89803 90978 . - 0 ID=cds-WP_005769406.1;Parent=gene-NYQ15_RS00450;Dbxref=GenBank:WP_005769406.1;Name=WP_005769406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819148.1;locus_tag=NYQ15_RS00450;product=phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase family protein;protein_id=WP_005769406.1;transl_table=11 NZ_CP103431.1 RefSeq gene 90978 91262 . - . ID=gene-NYQ15_RS00455;Name=NYQ15_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00455 NZ_CP103431.1 Protein Homology CDS 90978 91262 . - 0 ID=cds-WP_005769408.1;Parent=gene-NYQ15_RS00455;Dbxref=GenBank:WP_005769408.1;Name=WP_005769408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769408.1;locus_tag=NYQ15_RS00455;product=DUF3579 domain-containing protein;protein_id=WP_005769408.1;transl_table=11 NZ_CP103431.1 RefSeq gene 91440 92204 . + . ID=gene-NYQ15_RS00460;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=NYQ15_RS00460 NZ_CP103431.1 Protein Homology CDS 91440 92204 . + 0 ID=cds-WP_010957377.1;Parent=gene-NYQ15_RS00460;Dbxref=GenBank:WP_010957377.1;Name=WP_010957377.1;Ontology_term=GO:0008654,GO:0003882;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-serine O-phosphatidyltransferase activity|0003882||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819149.1;locus_tag=NYQ15_RS00460;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_010957377.1;transl_table=11 NZ_CP103431.1 RefSeq gene 92204 93028 . + . ID=gene-NYQ15_RS00465;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=NYQ15_RS00465 NZ_CP103431.1 Protein Homology CDS 92204 93028 . + 0 ID=cds-WP_005769412.1;Parent=gene-NYQ15_RS00465;Dbxref=GenBank:WP_005769412.1;Name=WP_005769412.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819150.1;locus_tag=NYQ15_RS00465;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_005769412.1;transl_table=11 NZ_CP103431.1 RefSeq gene 93043 93204 . + . ID=gene-NYQ15_RS00470;Name=NYQ15_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00470 NZ_CP103431.1 Protein Homology CDS 93043 93204 . + 0 ID=cds-WP_005772271.1;Parent=gene-NYQ15_RS00470;Dbxref=GenBank:WP_005772271.1;Name=WP_005772271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332947.1;locus_tag=NYQ15_RS00470;product=hypothetical protein;protein_id=WP_005772271.1;transl_table=11 NZ_CP103431.1 RefSeq gene 93210 93285 . - . ID=gene-NYQ15_RS00475;Name=NYQ15_RS00475;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS00475 NZ_CP103431.1 tRNAscan-SE tRNA 93210 93285 . - . ID=rna-NYQ15_RS00475;Parent=gene-NYQ15_RS00475;anticodon=(pos:complement(93249..93251));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS00475;product=tRNA-Glu NZ_CP103431.1 tRNAscan-SE exon 93210 93285 . - . ID=exon-NYQ15_RS00475-1;Parent=rna-NYQ15_RS00475;anticodon=(pos:complement(93249..93251));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS00475;product=tRNA-Glu NZ_CP103431.1 RefSeq gene 93330 93402 . - . ID=gene-NYQ15_RS00480;Name=NYQ15_RS00480;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS00480 NZ_CP103431.1 tRNAscan-SE tRNA 93330 93402 . - . ID=rna-NYQ15_RS00480;Parent=gene-NYQ15_RS00480;anticodon=(pos:complement(93367..93369));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS00480;product=tRNA-Ala NZ_CP103431.1 tRNAscan-SE exon 93330 93402 . - . ID=exon-NYQ15_RS00480-1;Parent=rna-NYQ15_RS00480;anticodon=(pos:complement(93367..93369));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS00480;product=tRNA-Ala NZ_CP103431.1 RefSeq gene 93496 93702 . + . ID=gene-NYQ15_RS00485;Name=NYQ15_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00485 NZ_CP103431.1 Protein Homology CDS 93496 93702 . + 0 ID=cds-WP_010957379.1;Parent=gene-NYQ15_RS00485;Dbxref=GenBank:WP_010957379.1;Name=WP_010957379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332948.1;locus_tag=NYQ15_RS00485;product=hypothetical protein;protein_id=WP_010957379.1;transl_table=11 NZ_CP103431.1 RefSeq gene 93693 94172 . + . ID=gene-NYQ15_RS00490;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=NYQ15_RS00490 NZ_CP103431.1 Protein Homology CDS 93693 94172 . + 0 ID=cds-WP_012570913.1;Parent=gene-NYQ15_RS00490;Dbxref=GenBank:WP_012570913.1;Name=WP_012570913.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819151.2;locus_tag=NYQ15_RS00490;product=phosphohistidine phosphatase SixA;protein_id=WP_012570913.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 94174 94576 . + . ID=gene-NYQ15_RS00495;Name=NYQ15_RS00495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS00495;pseudo=true NZ_CP103431.1 Protein Homology CDS 94174 94576 . + 0 ID=cds-NYQ15_RS00495;Parent=gene-NYQ15_RS00495;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819152.1;locus_tag=NYQ15_RS00495;product=lipoprotein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 94530 96140 . - . ID=gene-NYQ15_RS00500;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=NYQ15_RS00500 NZ_CP103431.1 Protein Homology CDS 94530 96140 . - 0 ID=cds-WP_005772257.1;Parent=gene-NYQ15_RS00500;Dbxref=GenBank:WP_005772257.1;Name=WP_005772257.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819153.1;locus_tag=NYQ15_RS00500;product=L-aspartate oxidase;protein_id=WP_005772257.1;transl_table=11 NZ_CP103431.1 RefSeq gene 96261 96374 . - . ID=gene-NYQ15_RS00505;Name=NYQ15_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00505 NZ_CP103431.1 Protein Homology CDS 96261 96374 . - 0 ID=cds-WP_005769421.1;Parent=gene-NYQ15_RS00505;Dbxref=GenBank:WP_005769421.1;Name=WP_005769421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819154.2;locus_tag=NYQ15_RS00505;product=hypothetical protein;protein_id=WP_005769421.1;transl_table=11 NZ_CP103431.1 RefSeq gene 96409 97851 . - . ID=gene-NYQ15_RS00510;Name=NYQ15_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00510 NZ_CP103431.1 Protein Homology CDS 96409 97851 . - 0 ID=cds-WP_032075219.1;Parent=gene-NYQ15_RS00510;Dbxref=GenBank:WP_032075219.1;Name=WP_032075219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018577558.1;locus_tag=NYQ15_RS00510;product=M20 family metallopeptidase;protein_id=WP_032075219.1;transl_table=11 NZ_CP103431.1 RefSeq gene 97929 98642 . - . ID=gene-NYQ15_RS00515;Name=NYQ15_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00515 NZ_CP103431.1 Protein Homology CDS 97929 98642 . - 0 ID=cds-WP_259423770.1;Parent=gene-NYQ15_RS00515;Dbxref=GenBank:WP_259423770.1;Name=WP_259423770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220093.1;locus_tag=NYQ15_RS00515;product=DUF3421 domain-containing protein;protein_id=WP_259423770.1;transl_table=11 NZ_CP103431.1 RefSeq gene 98654 99511 . - . ID=gene-NYQ15_RS00520;Name=NYQ15_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00520 NZ_CP103431.1 GeneMarkS-2+ CDS 98654 99511 . - 0 ID=cds-WP_259411721.1;Parent=gene-NYQ15_RS00520;Dbxref=GenBank:WP_259411721.1;Name=WP_259411721.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS00520;product=hypothetical protein;protein_id=WP_259411721.1;transl_table=11 NZ_CP103431.1 RefSeq gene 99624 99734 . + . ID=gene-NYQ15_RS00525;Name=NYQ15_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00525 NZ_CP103431.1 Protein Homology CDS 99624 99734 . + 0 ID=cds-WP_010957384.1;Parent=gene-NYQ15_RS00525;Dbxref=GenBank:WP_010957384.1;Name=WP_010957384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819156.1;locus_tag=NYQ15_RS00525;product=hypothetical protein;protein_id=WP_010957384.1;transl_table=11 NZ_CP103431.1 RefSeq gene 99731 99835 . - . ID=gene-NYQ15_RS00530;Name=NYQ15_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00530 NZ_CP103431.1 Protein Homology CDS 99731 99835 . - 0 ID=cds-WP_077019608.1;Parent=gene-NYQ15_RS00530;Dbxref=GenBank:WP_077019608.1;Name=WP_077019608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819535.1;locus_tag=NYQ15_RS00530;product=hypothetical protein;protein_id=WP_077019608.1;transl_table=11 NZ_CP103431.1 RefSeq gene 100040 101095 . + . ID=gene-NYQ15_RS00535;Name=NYQ15_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00535 NZ_CP103431.1 Protein Homology CDS 100040 101095 . + 0 ID=cds-WP_032075213.1;Parent=gene-NYQ15_RS00535;Dbxref=GenBank:WP_032075213.1;Name=WP_032075213.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819157.1;locus_tag=NYQ15_RS00535;product=methionine ABC transporter ATP-binding protein;protein_id=WP_032075213.1;transl_table=11 NZ_CP103431.1 RefSeq gene 101064 101720 . + . ID=gene-NYQ15_RS00540;Name=NYQ15_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00540 NZ_CP103431.1 Protein Homology CDS 101064 101720 . + 0 ID=cds-WP_005769429.1;Parent=gene-NYQ15_RS00540;Dbxref=GenBank:WP_005769429.1;Name=WP_005769429.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819158.3;locus_tag=NYQ15_RS00540;product=methionine ABC transporter permease;protein_id=WP_005769429.1;transl_table=11 NZ_CP103431.1 RefSeq gene 101733 102536 . + . ID=gene-NYQ15_RS00545;Name=NYQ15_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00545 NZ_CP103431.1 Protein Homology CDS 101733 102536 . + 0 ID=cds-WP_005769431.1;Parent=gene-NYQ15_RS00545;Dbxref=GenBank:WP_005769431.1;Name=WP_005769431.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819159.1;locus_tag=NYQ15_RS00545;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_005769431.1;transl_table=11 NZ_CP103431.1 RefSeq gene 102547 103032 . - . ID=gene-NYQ15_RS00550;Name=NYQ15_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00550 NZ_CP103431.1 Protein Homology CDS 102547 103032 . - 0 ID=cds-WP_011997364.1;Parent=gene-NYQ15_RS00550;Dbxref=GenBank:WP_011997364.1;Name=WP_011997364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819160.2;locus_tag=NYQ15_RS00550;product=hypothetical protein;protein_id=WP_011997364.1;transl_table=11 NZ_CP103431.1 RefSeq gene 103059 103400 . + . ID=gene-NYQ15_RS00555;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=NYQ15_RS00555 NZ_CP103431.1 cmsearch RNase_P_RNA 103059 103400 . + . ID=rna-NYQ15_RS00555;Parent=gene-NYQ15_RS00555;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=NYQ15_RS00555;product=RNase P RNA component class A NZ_CP103431.1 cmsearch exon 103059 103400 . + . ID=exon-NYQ15_RS00555-1;Parent=rna-NYQ15_RS00555;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=NYQ15_RS00555;product=RNase P RNA component class A NZ_CP103431.1 RefSeq gene 103437 104627 . + . ID=gene-NYQ15_RS00560;Name=NYQ15_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00560 NZ_CP103431.1 Protein Homology CDS 103437 104627 . + 0 ID=cds-WP_005772253.1;Parent=gene-NYQ15_RS00560;Dbxref=GenBank:WP_005772253.1;Name=WP_005772253.1;Ontology_term=GO:0009058,GO:0008890,GO:0030170;gbkey=CDS;go_function=glycine C-acetyltransferase activity|0008890||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819161.1;locus_tag=NYQ15_RS00560;product=glycine C-acetyltransferase;protein_id=WP_005772253.1;transl_table=11 NZ_CP103431.1 RefSeq gene 104669 105697 . + . ID=gene-NYQ15_RS00565;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=NYQ15_RS00565 NZ_CP103431.1 Protein Homology CDS 104669 105697 . + 0 ID=cds-WP_005769439.1;Parent=gene-NYQ15_RS00565;Dbxref=GenBank:WP_005769439.1;Name=WP_005769439.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819162.1;locus_tag=NYQ15_RS00565;product=L-threonine 3-dehydrogenase;protein_id=WP_005769439.1;transl_table=11 NZ_CP103431.1 RefSeq gene 105733 105945 . - . ID=gene-NYQ15_RS00570;Name=NYQ15_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00570 NZ_CP103431.1 Protein Homology CDS 105733 105945 . - 0 ID=cds-WP_005772262.1;Parent=gene-NYQ15_RS00570;Dbxref=GenBank:WP_005772262.1;Name=WP_005772262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819163.1;locus_tag=NYQ15_RS00570;product=CBU_0113 family Dot/Icm T4SS effector;protein_id=WP_005772262.1;transl_table=11 NZ_CP103431.1 RefSeq gene 106098 106580 . + . ID=gene-NYQ15_RS00575;Name=NYQ15_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00575 NZ_CP103431.1 Protein Homology CDS 106098 106580 . + 0 ID=cds-WP_005772268.1;Parent=gene-NYQ15_RS00575;Dbxref=GenBank:WP_005772268.1;Name=WP_005772268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819164.1;locus_tag=NYQ15_RS00575;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_005772268.1;transl_table=11 NZ_CP103431.1 RefSeq gene 106763 107221 . + . ID=gene-NYQ15_RS00580;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=NYQ15_RS00580 NZ_CP103431.1 Protein Homology CDS 106763 107221 . + 0 ID=cds-WP_005769445.1;Parent=gene-NYQ15_RS00580;Dbxref=GenBank:WP_005769445.1;Name=WP_005769445.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003103101.1;locus_tag=NYQ15_RS00580;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_005769445.1;transl_table=11 NZ_CP103431.1 RefSeq gene 107227 108150 . + . ID=gene-NYQ15_RS00585;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=NYQ15_RS00585 NZ_CP103431.1 Protein Homology CDS 107227 108150 . + 0 ID=cds-WP_005769446.1;Parent=gene-NYQ15_RS00585;Dbxref=GenBank:WP_005769446.1;Name=WP_005769446.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819166.1;locus_tag=NYQ15_RS00585;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_005769446.1;transl_table=11 NZ_CP103431.1 RefSeq gene 108147 108494 . + . ID=gene-NYQ15_RS00590;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=NYQ15_RS00590 NZ_CP103431.1 Protein Homology CDS 108147 108494 . + 0 ID=cds-WP_005769447.1;Parent=gene-NYQ15_RS00590;Dbxref=GenBank:WP_005769447.1;Name=WP_005769447.1;Ontology_term=GO:0000910,GO:0016020;gbkey=CDS;gene=ftsL;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819167.1;locus_tag=NYQ15_RS00590;product=cell division protein FtsL;protein_id=WP_005769447.1;transl_table=11 NZ_CP103431.1 RefSeq gene 108487 110145 . + . ID=gene-NYQ15_RS00595;Name=NYQ15_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00595 NZ_CP103431.1 Protein Homology CDS 108487 110145 . + 0 ID=cds-WP_012570911.1;Parent=gene-NYQ15_RS00595;Dbxref=GenBank:WP_012570911.1;Name=WP_012570911.1;Ontology_term=GO:0009252,GO:0008658,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819168.2;locus_tag=NYQ15_RS00595;product=penicillin-binding protein 2;protein_id=WP_012570911.1;transl_table=11 NZ_CP103431.1 RefSeq gene 110150 111526 . - . ID=gene-NYQ15_RS00600;Name=NYQ15_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00600 NZ_CP103431.1 Protein Homology CDS 110150 111526 . - 0 ID=cds-WP_010957391.1;Parent=gene-NYQ15_RS00600;Dbxref=GenBank:WP_010957391.1;Name=WP_010957391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819169.2;locus_tag=NYQ15_RS00600;product=hypothetical protein;protein_id=WP_010957391.1;transl_table=11 NZ_CP103431.1 RefSeq gene 111655 111786 . - . ID=gene-NYQ15_RS00605;Name=NYQ15_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00605 NZ_CP103431.1 Protein Homology CDS 111655 111786 . - 0 ID=cds-WP_005769452.1;Parent=gene-NYQ15_RS00605;Dbxref=GenBank:WP_005769452.1;Name=WP_005769452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819171.1;locus_tag=NYQ15_RS00605;product=hypothetical protein;protein_id=WP_005769452.1;transl_table=11 NZ_CP103431.1 RefSeq gene 111798 112076 . + . ID=gene-NYQ15_RS00610;Name=NYQ15_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00610 NZ_CP103431.1 Protein Homology CDS 111798 112076 . + 0 ID=cds-WP_005772238.1;Parent=gene-NYQ15_RS00610;Dbxref=GenBank:WP_005772238.1;Name=WP_005772238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819172.1;locus_tag=NYQ15_RS00610;product=CBU_0122 family Dot/Icm T4SS effector;protein_id=WP_005772238.1;transl_table=11 NZ_CP103431.1 RefSeq gene 112127 113596 . + . ID=gene-NYQ15_RS00615;Name=NYQ15_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00615 NZ_CP103431.1 Protein Homology CDS 112127 113596 . + 0 ID=cds-WP_005769454.1;Parent=gene-NYQ15_RS00615;Dbxref=GenBank:WP_005769454.1;Name=WP_005769454.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819173.1;locus_tag=NYQ15_RS00615;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_005769454.1;transl_table=11 NZ_CP103431.1 RefSeq gene 113593 114933 . + . ID=gene-NYQ15_RS00620;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=NYQ15_RS00620 NZ_CP103431.1 Protein Homology CDS 113593 114933 . + 0 ID=cds-WP_005772276.1;Parent=gene-NYQ15_RS00620;Dbxref=GenBank:WP_005772276.1;Name=WP_005772276.1;Ontology_term=GO:0009252,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819174.1;locus_tag=NYQ15_RS00620;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_005772276.1;transl_table=11 NZ_CP103431.1 RefSeq gene 114938 116023 . + . ID=gene-NYQ15_RS00625;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=NYQ15_RS00625 NZ_CP103431.1 Protein Homology CDS 114938 116023 . + 0 ID=cds-WP_005769458.1;Parent=gene-NYQ15_RS00625;Dbxref=GenBank:WP_005769458.1;Name=WP_005769458.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819175.1;locus_tag=NYQ15_RS00625;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_005769458.1;transl_table=11 NZ_CP103431.1 RefSeq gene 116195 116314 . + . ID=gene-NYQ15_RS00630;Name=NYQ15_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00630 NZ_CP103431.1 Protein Homology CDS 116195 116314 . + 0 ID=cds-WP_005769462.1;Parent=gene-NYQ15_RS00630;Dbxref=GenBank:WP_005769462.1;Name=WP_005769462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819177.1;locus_tag=NYQ15_RS00630;product=hypothetical protein;protein_id=WP_005769462.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 116382 117698 . + . ID=gene-NYQ15_RS00635;Name=coxCC2;gbkey=Gene;gene=coxCC2;gene_biotype=pseudogene;locus_tag=NYQ15_RS00635;pseudo=true NZ_CP103431.1 Protein Homology CDS 116382 117698 . + 0 ID=cds-NYQ15_RS00635;Parent=gene-NYQ15_RS00635;Note=internal stop;gbkey=CDS;gene=coxCC2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570464.1;locus_tag=NYQ15_RS00635;product=Dot/Icm T4SS effector CoxCC2;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 117817 117996 . + . ID=gene-NYQ15_RS00640;Name=NYQ15_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00640 NZ_CP103431.1 Protein Homology CDS 117817 117996 . + 0 ID=cds-WP_010957394.1;Parent=gene-NYQ15_RS00640;Dbxref=GenBank:WP_010957394.1;Name=WP_010957394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819180.2;locus_tag=NYQ15_RS00640;product=hypothetical protein;protein_id=WP_010957394.1;transl_table=11 NZ_CP103431.1 RefSeq gene 118051 119379 . + . ID=gene-NYQ15_RS00645;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=NYQ15_RS00645 NZ_CP103431.1 Protein Homology CDS 118051 119379 . + 0 ID=cds-WP_005769470.1;Parent=gene-NYQ15_RS00645;Dbxref=GenBank:WP_005769470.1;Name=WP_005769470.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819181.1;locus_tag=NYQ15_RS00645;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_005769470.1;transl_table=11 NZ_CP103431.1 RefSeq gene 119379 120497 . + . ID=gene-NYQ15_RS00650;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=NYQ15_RS00650 NZ_CP103431.1 Protein Homology CDS 119379 120497 . + 0 ID=cds-WP_005772261.1;Parent=gene-NYQ15_RS00650;Dbxref=GenBank:WP_005772261.1;Name=WP_005772261.1;Ontology_term=GO:0009252,GO:0051301,GO:0016020;gbkey=CDS;gene=ftsW;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819182.1;locus_tag=NYQ15_RS00650;product=putative lipid II flippase FtsW;protein_id=WP_005772261.1;transl_table=11 NZ_CP103431.1 RefSeq gene 120549 122048 . + . ID=gene-NYQ15_RS00655;Name=NYQ15_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00655 NZ_CP103431.1 Protein Homology CDS 120549 122048 . + 0 ID=cds-WP_259431006.1;Parent=gene-NYQ15_RS00655;Dbxref=GenBank:WP_259431006.1;Name=WP_259431006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997356.1;locus_tag=NYQ15_RS00655;product=hypothetical protein;protein_id=WP_259431006.1;transl_table=11 NZ_CP103431.1 RefSeq gene 122098 123174 . + . ID=gene-NYQ15_RS00660;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=NYQ15_RS00660 NZ_CP103431.1 Protein Homology CDS 122098 123174 . + 0 ID=cds-WP_005769484.1;Parent=gene-NYQ15_RS00660;Dbxref=GenBank:WP_005769484.1;Name=WP_005769484.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819185.1;locus_tag=NYQ15_RS00660;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_005769484.1;transl_table=11 NZ_CP103431.1 RefSeq gene 123161 124558 . + . ID=gene-NYQ15_RS00665;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=NYQ15_RS00665 NZ_CP103431.1 Protein Homology CDS 123161 124558 . + 0 ID=cds-WP_005769486.1;Parent=gene-NYQ15_RS00665;Dbxref=GenBank:WP_005769486.1;Name=WP_005769486.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819186.1;locus_tag=NYQ15_RS00665;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_005769486.1;transl_table=11 NZ_CP103431.1 RefSeq gene 124551 125501 . + . ID=gene-NYQ15_RS00670;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=NYQ15_RS00670 NZ_CP103431.1 Protein Homology CDS 124551 125501 . + 0 ID=cds-WP_005769489.1;Parent=gene-NYQ15_RS00670;Dbxref=GenBank:WP_005769489.1;Name=WP_005769489.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819187.1;locus_tag=NYQ15_RS00670;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_005769489.1;transl_table=11 NZ_CP103431.1 RefSeq gene 125501 126232 . + . ID=gene-NYQ15_RS00675;Name=NYQ15_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00675 NZ_CP103431.1 Protein Homology CDS 125501 126232 . + 0 ID=cds-WP_005769491.1;Parent=gene-NYQ15_RS00675;Dbxref=GenBank:WP_005769491.1;Name=WP_005769491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819188.1;locus_tag=NYQ15_RS00675;product=cell division protein FtsQ/DivIB;protein_id=WP_005769491.1;transl_table=11 NZ_CP103431.1 RefSeq gene 126229 126849 . - . ID=gene-NYQ15_RS00680;Name=NYQ15_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00680 NZ_CP103431.1 Protein Homology CDS 126229 126849 . - 0 ID=cds-WP_005772259.1;Parent=gene-NYQ15_RS00680;Dbxref=GenBank:WP_005772259.1;Name=WP_005772259.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819189.1;locus_tag=NYQ15_RS00680;product=carbonic anhydrase;protein_id=WP_005772259.1;transl_table=11 NZ_CP103431.1 RefSeq gene 127031 128272 . + . ID=gene-NYQ15_RS00685;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=NYQ15_RS00685 NZ_CP103431.1 Protein Homology CDS 127031 128272 . + 0 ID=cds-WP_010957399.1;Parent=gene-NYQ15_RS00685;Dbxref=GenBank:WP_010957399.1;Name=WP_010957399.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819190.2;locus_tag=NYQ15_RS00685;product=cell division protein FtsA;protein_id=WP_010957399.1;transl_table=11 NZ_CP103431.1 RefSeq gene 128294 129454 . + . ID=gene-NYQ15_RS00690;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=NYQ15_RS00690 NZ_CP103431.1 Protein Homology CDS 128294 129454 . + 0 ID=cds-WP_005769496.1;Parent=gene-NYQ15_RS00690;Dbxref=GenBank:WP_005769496.1;Name=WP_005769496.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769496.1;locus_tag=NYQ15_RS00690;product=cell division protein FtsZ;protein_id=WP_005769496.1;transl_table=11 NZ_CP103431.1 RefSeq gene 129614 130525 . + . ID=gene-NYQ15_RS00695;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=NYQ15_RS00695 NZ_CP103431.1 Protein Homology CDS 129614 130525 . + 0 ID=cds-WP_010957401.1;Parent=gene-NYQ15_RS00695;Dbxref=GenBank:WP_010957401.1;Name=WP_010957401.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819192.1;locus_tag=NYQ15_RS00695;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_010957401.1;transl_table=11 NZ_CP103431.1 RefSeq gene 131095 132381 . + . ID=gene-NYQ15_RS00705;Name=NYQ15_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00705 NZ_CP103431.1 Protein Homology CDS 131095 132381 . + 0 ID=cds-WP_259431007.1;Parent=gene-NYQ15_RS00705;Dbxref=GenBank:WP_259431007.1;Name=WP_259431007.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220107.1;locus_tag=NYQ15_RS00705;product=ankyrin repeat domain-containing protein;protein_id=WP_259431007.1;transl_table=11 NZ_CP103431.1 RefSeq gene 132433 132777 . - . ID=gene-NYQ15_RS00710;Name=NYQ15_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00710 NZ_CP103431.1 Protein Homology CDS 132433 132777 . - 0 ID=cds-WP_010957403.1;Parent=gene-NYQ15_RS00710;Dbxref=GenBank:WP_010957403.1;Name=WP_010957403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819196.2;locus_tag=NYQ15_RS00710;product=DciA family protein;protein_id=WP_010957403.1;transl_table=11 NZ_CP103431.1 RefSeq gene 132786 135527 . + . ID=gene-NYQ15_RS00715;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=NYQ15_RS00715 NZ_CP103431.1 Protein Homology CDS 132786 135527 . + 0 ID=cds-WP_259431098.1;Parent=gene-NYQ15_RS00715;Dbxref=GenBank:WP_259431098.1;Name=WP_259431098.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772793.1;locus_tag=NYQ15_RS00715;product=preprotein translocase subunit SecA;protein_id=WP_259431098.1;transl_table=11 NZ_CP103431.1 RefSeq gene 135506 135919 . + . ID=gene-NYQ15_RS00720;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=NYQ15_RS00720 NZ_CP103431.1 Protein Homology CDS 135506 135919 . + 0 ID=cds-WP_005769513.1;Parent=gene-NYQ15_RS00720;Dbxref=GenBank:WP_005769513.1;Name=WP_005769513.1;Ontology_term=GO:0006281,GO:0016818;gbkey=CDS;gene=mutT;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819198.1;locus_tag=NYQ15_RS00720;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_005769513.1;transl_table=11 NZ_CP103431.1 RefSeq gene 136287 137099 . - . ID=gene-NYQ15_RS00725;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=NYQ15_RS00725 NZ_CP103431.1 Protein Homology CDS 136287 137099 . - 0 ID=cds-WP_259431008.1;Parent=gene-NYQ15_RS00725;Dbxref=GenBank:WP_259431008.1;Name=WP_259431008.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819200.2;locus_tag=NYQ15_RS00725;product=cell division protein ZapD;protein_id=WP_259431008.1;transl_table=11 NZ_CP103431.1 RefSeq gene 137124 137960 . - . ID=gene-NYQ15_RS00730;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=NYQ15_RS00730 NZ_CP103431.1 Protein Homology CDS 137124 137960 . - 0 ID=cds-WP_005769517.1;Parent=gene-NYQ15_RS00730;Dbxref=GenBank:WP_005769517.1;Name=WP_005769517.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819201.1;locus_tag=NYQ15_RS00730;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_005769517.1;transl_table=11 NZ_CP103431.1 RefSeq gene 137981 138580 . - . ID=gene-NYQ15_RS00735;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=NYQ15_RS00735 NZ_CP103431.1 Protein Homology CDS 137981 138580 . - 0 ID=cds-WP_005772796.1;Parent=gene-NYQ15_RS00735;Dbxref=GenBank:WP_005772796.1;Name=WP_005772796.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819202.1;locus_tag=NYQ15_RS00735;product=dephospho-CoA kinase;protein_id=WP_005772796.1;transl_table=11 NZ_CP103431.1 RefSeq gene 138591 139451 . - . ID=gene-NYQ15_RS00740;Name=NYQ15_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00740 NZ_CP103431.1 Protein Homology CDS 138591 139451 . - 0 ID=cds-WP_005769521.1;Parent=gene-NYQ15_RS00740;Dbxref=GenBank:WP_005769521.1;Name=WP_005769521.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819203.1;locus_tag=NYQ15_RS00740;product=A24 family peptidase;protein_id=WP_005769521.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 139477 140530 . - . ID=gene-NYQ15_RS00745;Name=NYQ15_RS00745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS00745;pseudo=true NZ_CP103431.1 Protein Homology CDS 139477 140530 . - 0 ID=cds-NYQ15_RS00745;Parent=gene-NYQ15_RS00745;Note=frameshifted;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819204.1;locus_tag=NYQ15_RS00745;product=type II secretion system F family protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 140523 142076 . - . ID=gene-NYQ15_RS00750;Name=NYQ15_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00750 NZ_CP103431.1 Protein Homology CDS 140523 142076 . - 0 ID=cds-WP_005772798.1;Parent=gene-NYQ15_RS00750;Dbxref=GenBank:WP_005772798.1;Name=WP_005772798.1;Ontology_term=GO:0009306,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819205.1;locus_tag=NYQ15_RS00750;product=GspE/PulE family protein;protein_id=WP_005772798.1;transl_table=11 NZ_CP103431.1 RefSeq gene 142066 142488 . - . ID=gene-NYQ15_RS00755;Name=NYQ15_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00755 NZ_CP103431.1 Protein Homology CDS 142066 142488 . - 0 ID=cds-WP_005769527.1;Parent=gene-NYQ15_RS00755;Dbxref=GenBank:WP_005769527.1;Name=WP_005769527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819206.1;locus_tag=NYQ15_RS00755;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_005769527.1;transl_table=11 NZ_CP103431.1 RefSeq gene 142619 142691 . + . ID=gene-NYQ15_RS00760;Name=NYQ15_RS00760;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS00760 NZ_CP103431.1 tRNAscan-SE tRNA 142619 142691 . + . ID=rna-NYQ15_RS00760;Parent=gene-NYQ15_RS00760;anticodon=(pos:142652..142654);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS00760;product=tRNA-Thr NZ_CP103431.1 tRNAscan-SE exon 142619 142691 . + . ID=exon-NYQ15_RS00760-1;Parent=rna-NYQ15_RS00760;anticodon=(pos:142652..142654);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS00760;product=tRNA-Thr NZ_CP103431.1 RefSeq gene 142736 142897 . - . ID=gene-NYQ15_RS00765;Name=NYQ15_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00765 NZ_CP103431.1 Protein Homology CDS 142736 142897 . - 0 ID=cds-WP_005769529.1;Parent=gene-NYQ15_RS00765;Dbxref=GenBank:WP_005769529.1;Name=WP_005769529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332950.1;locus_tag=NYQ15_RS00765;product=integrase;protein_id=WP_005769529.1;transl_table=11 NZ_CP103431.1 RefSeq gene 143040 143141 . - . ID=gene-NYQ15_RS00770;Name=NYQ15_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00770 NZ_CP103431.1 Protein Homology CDS 143040 143141 . - 0 ID=cds-WP_010957411.1;Parent=gene-NYQ15_RS00770;Dbxref=GenBank:WP_010957411.1;Name=WP_010957411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819207.1;locus_tag=NYQ15_RS00770;product=hypothetical protein;protein_id=WP_010957411.1;transl_table=11 NZ_CP103431.1 RefSeq gene 143138 143695 . - . ID=gene-NYQ15_RS00775;Name=cas6f;gbkey=Gene;gene=cas6f;gene_biotype=protein_coding;locus_tag=NYQ15_RS00775 NZ_CP103431.1 Protein Homology CDS 143138 143695 . - 0 ID=cds-WP_005769530.1;Parent=gene-NYQ15_RS00775;Dbxref=GenBank:WP_005769530.1;Name=WP_005769530.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas6f;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819208.1;locus_tag=NYQ15_RS00775;product=type I-F CRISPR-associated endoribonuclease Cas6/Csy4;protein_id=WP_005769530.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 143704 144812 . - . ID=gene-NYQ15_RS00785;Name=csy3;gbkey=Gene;gene=csy3;gene_biotype=pseudogene;locus_tag=NYQ15_RS00785;pseudo=true NZ_CP103431.1 Protein Homology CDS 143704 144812 . - 0 ID=cds-NYQ15_RS00785;Parent=gene-NYQ15_RS00785;Note=frameshifted;Ontology_term=GO:0043571;gbkey=CDS;gene=csy3;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:NF021155.5;locus_tag=NYQ15_RS00785;product=type I-F CRISPR-associated protein Csy3;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 144796 145386 . - . ID=gene-NYQ15_RS00790;Name=NYQ15_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00790 NZ_CP103431.1 Protein Homology CDS 144796 145386 . - 0 ID=cds-WP_259411723.1;Parent=gene-NYQ15_RS00790;Dbxref=GenBank:WP_259411723.1;Name=WP_259411723.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021154.5;locus_tag=NYQ15_RS00790;product=type I-F CRISPR-associated protein Csy2;protein_id=WP_259411723.1;transl_table=11 NZ_CP103431.1 RefSeq gene 145367 145669 . - . ID=gene-NYQ15_RS00795;Name=NYQ15_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00795 NZ_CP103431.1 Protein Homology CDS 145367 145669 . - 0 ID=cds-WP_259411724.1;Parent=gene-NYQ15_RS00795;Dbxref=GenBank:WP_259411724.1;Name=WP_259411724.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021154.5;locus_tag=NYQ15_RS00795;product=type I-F CRISPR-associated protein Csy2;protein_id=WP_259411724.1;transl_table=11 NZ_CP103431.1 RefSeq gene 145666 146763 . - . ID=gene-NYQ15_RS00800;Name=NYQ15_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00800 NZ_CP103431.1 Protein Homology CDS 145666 146763 . - 0 ID=cds-WP_259431009.1;Parent=gene-NYQ15_RS00800;Dbxref=GenBank:WP_259431009.1;Name=WP_259431009.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021151.5;locus_tag=NYQ15_RS00800;product=type I-F CRISPR-associated protein Csy1;protein_id=WP_259431009.1;transl_table=11 NZ_CP103431.1 RefSeq gene 146696 146911 . - . ID=gene-NYQ15_RS00805;Name=NYQ15_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00805 NZ_CP103431.1 Protein Homology CDS 146696 146911 . - 0 ID=cds-WP_230593299.1;Parent=gene-NYQ15_RS00805;Dbxref=GenBank:WP_230593299.1;Name=WP_230593299.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021151.5;locus_tag=NYQ15_RS00805;product=type I-F CRISPR-associated protein Csy1;protein_id=WP_230593299.1;transl_table=11 NZ_CP103431.1 RefSeq gene 146922 150275 . - . ID=gene-NYQ15_RS00810;Name=cas3f;gbkey=Gene;gene=cas3f;gene_biotype=protein_coding;locus_tag=NYQ15_RS00810 NZ_CP103431.1 Protein Homology CDS 146922 150275 . - 0 ID=cds-WP_259431010.1;Parent=gene-NYQ15_RS00810;Dbxref=GenBank:WP_259431010.1;Name=WP_259431010.1;Ontology_term=GO:0043571,GO:0004386;gbkey=CDS;gene=cas3f;go_function=helicase activity|0004386||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:TIGR02562.1;locus_tag=NYQ15_RS00810;product=type I-F CRISPR-associated helicase Cas3f;protein_id=WP_259431010.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 150272 151239 . - . ID=gene-NYQ15_RS10560;Name=cas1f;gbkey=Gene;gene=cas1f;gene_biotype=pseudogene;locus_tag=NYQ15_RS10560;pseudo=true NZ_CP103431.1 Protein Homology CDS 150272 151239 . - 0 ID=cds-NYQ15_RS10560;Parent=gene-NYQ15_RS10560;Note=frameshifted;Ontology_term=GO:0043571,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1f;go_function=DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:TIGR03637.1;locus_tag=NYQ15_RS10560;product=type I-F CRISPR-associated endonuclease Cas1f;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 151708 152298 . - . ID=gene-NYQ15_RS00825;Name=NYQ15_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00825 NZ_CP103431.1 Protein Homology CDS 151708 152298 . - 0 ID=cds-WP_077019606.1;Parent=gene-NYQ15_RS00825;Dbxref=GenBank:WP_077019606.1;Name=WP_077019606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819211.1;locus_tag=NYQ15_RS00825;product=hypothetical protein;protein_id=WP_077019606.1;transl_table=11 NZ_CP103431.1 RefSeq gene 155892 156227 . - . ID=gene-NYQ15_RS00830;Name=NYQ15_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00830;partial=true;start_range=.,155892 NZ_CP103431.1 Protein Homology CDS 155892 156227 . - 0 ID=cds-WP_259411728.1;Parent=gene-NYQ15_RS00830;Dbxref=GenBank:WP_259411728.1;Name=WP_259411728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819219.1;locus_tag=NYQ15_RS00830;partial=true;product=hypothetical protein;protein_id=WP_259411728.1;start_range=.,155892;transl_table=11 NZ_CP103431.1 RefSeq gene 156553 156798 . - . ID=gene-NYQ15_RS00835;Name=NYQ15_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00835 NZ_CP103431.1 GeneMarkS-2+ CDS 156553 156798 . - 0 ID=cds-WP_259431012.1;Parent=gene-NYQ15_RS00835;Dbxref=GenBank:WP_259431012.1;Name=WP_259431012.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS00835;product=hypothetical protein;protein_id=WP_259431012.1;transl_table=11 NZ_CP103431.1 RefSeq gene 156935 157675 . + . ID=gene-NYQ15_RS00840;Name=coxK1;gbkey=Gene;gene=coxK1;gene_biotype=protein_coding;locus_tag=NYQ15_RS00840 NZ_CP103431.1 Protein Homology CDS 156935 157675 . + 0 ID=cds-WP_005772950.1;Parent=gene-NYQ15_RS00840;Dbxref=GenBank:WP_005772950.1;Name=WP_005772950.1;gbkey=CDS;gene=coxK1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819221.1;locus_tag=NYQ15_RS00840;product=Dot/Icm T4SS effector protein kinase CoxK1;protein_id=WP_005772950.1;transl_table=11 NZ_CP103431.1 RefSeq gene 157740 158927 . + . ID=gene-NYQ15_RS00845;Name=NYQ15_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00845 NZ_CP103431.1 Protein Homology CDS 157740 158927 . + 0 ID=cds-WP_012570439.1;Parent=gene-NYQ15_RS00845;Dbxref=GenBank:WP_012570439.1;Name=WP_012570439.1;Ontology_term=GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819222.1;locus_tag=NYQ15_RS00845;product=S1C family serine protease;protein_id=WP_012570439.1;transl_table=11 NZ_CP103431.1 RefSeq gene 158936 160516 . - . ID=gene-NYQ15_RS00850;Name=NYQ15_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00850 NZ_CP103431.1 Protein Homology CDS 158936 160516 . - 0 ID=cds-WP_259431013.1;Parent=gene-NYQ15_RS00850;Dbxref=GenBank:WP_259431013.1;Name=WP_259431013.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819223.2;locus_tag=NYQ15_RS00850;product=glycine betaine ABC transporter substrate-binding protein;protein_id=WP_259431013.1;transl_table=11 NZ_CP103431.1 RefSeq gene 160513 161271 . - . ID=gene-NYQ15_RS00855;Name=NYQ15_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00855 NZ_CP103431.1 Protein Homology CDS 160513 161271 . - 0 ID=cds-WP_005772946.1;Parent=gene-NYQ15_RS00855;Dbxref=GenBank:WP_005772946.1;Name=WP_005772946.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819224.1;locus_tag=NYQ15_RS00855;product=ABC transporter ATP-binding protein;protein_id=WP_005772946.1;transl_table=11 NZ_CP103431.1 RefSeq gene 161318 162436 . - . ID=gene-NYQ15_RS00860;Name=NYQ15_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00860 NZ_CP103431.1 Protein Homology CDS 161318 162436 . - 0 ID=cds-WP_098953123.1;Parent=gene-NYQ15_RS00860;Dbxref=GenBank:WP_098953123.1;Name=WP_098953123.1;Ontology_term=GO:0006040,GO:0009254,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819225.1;locus_tag=NYQ15_RS00860;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_098953123.1;transl_table=11 NZ_CP103431.1 RefSeq gene 162440 163798 . - . ID=gene-NYQ15_RS00865;Name=NYQ15_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00865 NZ_CP103431.1 Protein Homology CDS 162440 163798 . - 0 ID=cds-WP_012570639.1;Parent=gene-NYQ15_RS00865;Dbxref=GenBank:WP_012570639.1;Name=WP_012570639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819226.2;locus_tag=NYQ15_RS00865;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_012570639.1;transl_table=11 NZ_CP103431.1 RefSeq gene 163822 165021 . + . ID=gene-NYQ15_RS00870;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=NYQ15_RS00870 NZ_CP103431.1 Protein Homology CDS 163822 165021 . + 0 ID=cds-WP_005770638.1;Parent=gene-NYQ15_RS00870;Dbxref=GenBank:WP_005770638.1;Name=WP_005770638.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819227.1;locus_tag=NYQ15_RS00870;product=tyrosine--tRNA ligase;protein_id=WP_005770638.1;transl_table=11 NZ_CP103431.1 RefSeq gene 165058 165315 . - . ID=gene-NYQ15_RS00875;Name=NYQ15_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00875 NZ_CP103431.1 Protein Homology CDS 165058 165315 . - 0 ID=cds-WP_032074819.1;Parent=gene-NYQ15_RS00875;Dbxref=GenBank:WP_032074819.1;Name=WP_032074819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332951.1;locus_tag=NYQ15_RS00875;product=hypothetical protein;protein_id=WP_032074819.1;transl_table=11 NZ_CP103431.1 RefSeq gene 165698 167237 . + . ID=gene-NYQ15_RS00880;Name=NYQ15_RS00880;gbkey=Gene;gene_biotype=rRNA;locus_tag=NYQ15_RS00880 NZ_CP103431.1 cmsearch rRNA 165698 167237 . + . ID=rna-NYQ15_RS00880;Parent=gene-NYQ15_RS00880;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=NYQ15_RS00880;product=16S ribosomal RNA NZ_CP103431.1 cmsearch exon 165698 167237 . + . ID=exon-NYQ15_RS00880-1;Parent=rna-NYQ15_RS00880;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=NYQ15_RS00880;product=16S ribosomal RNA NZ_CP103431.1 RefSeq gene 167345 167421 . + . ID=gene-NYQ15_RS00885;Name=NYQ15_RS00885;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS00885 NZ_CP103431.1 tRNAscan-SE tRNA 167345 167421 . + . ID=rna-NYQ15_RS00885;Parent=gene-NYQ15_RS00885;anticodon=(pos:167379..167381);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS00885;product=tRNA-Ile NZ_CP103431.1 tRNAscan-SE exon 167345 167421 . + . ID=exon-NYQ15_RS00885-1;Parent=rna-NYQ15_RS00885;anticodon=(pos:167379..167381);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS00885;product=tRNA-Ile NZ_CP103431.1 RefSeq gene 167426 167501 . + . ID=gene-NYQ15_RS00890;Name=NYQ15_RS00890;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS00890 NZ_CP103431.1 tRNAscan-SE tRNA 167426 167501 . + . ID=rna-NYQ15_RS00890;Parent=gene-NYQ15_RS00890;anticodon=(pos:167459..167461);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS00890;product=tRNA-Ala NZ_CP103431.1 tRNAscan-SE exon 167426 167501 . + . ID=exon-NYQ15_RS00890-1;Parent=rna-NYQ15_RS00890;anticodon=(pos:167459..167461);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS00890;product=tRNA-Ala NZ_CP103431.1 RefSeq gene 167698 172036 . + . ID=gene-NYQ15_RS00895;Name=NYQ15_RS00895;gbkey=Gene;gene_biotype=rRNA;locus_tag=NYQ15_RS00895 NZ_CP103431.1 cmsearch rRNA 167698 172036 . + . ID=rna-NYQ15_RS00895;Parent=gene-NYQ15_RS00895;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=NYQ15_RS00895;product=23S ribosomal RNA NZ_CP103431.1 cmsearch exon 167698 172036 . + . ID=exon-NYQ15_RS00895-1;Parent=rna-NYQ15_RS00895;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=NYQ15_RS00895;product=23S ribosomal RNA NZ_CP103431.1 RefSeq gene 172083 172196 . + . ID=gene-NYQ15_RS00900;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NYQ15_RS00900 NZ_CP103431.1 cmsearch rRNA 172083 172196 . + . ID=rna-NYQ15_RS00900;Parent=gene-NYQ15_RS00900;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=NYQ15_RS00900;product=5S ribosomal RNA NZ_CP103431.1 cmsearch exon 172083 172196 . + . ID=exon-NYQ15_RS00900-1;Parent=rna-NYQ15_RS00900;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=NYQ15_RS00900;product=5S ribosomal RNA NZ_CP103431.1 RefSeq gene 172363 172635 . + . ID=gene-NYQ15_RS00905;Name=NYQ15_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00905 NZ_CP103431.1 Protein Homology CDS 172363 172635 . + 0 ID=cds-WP_032074820.1;Parent=gene-NYQ15_RS00905;Dbxref=GenBank:WP_032074820.1;Name=WP_032074820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819229.2;locus_tag=NYQ15_RS00905;product=CBU_0183 family Dot/Icm T4SS effector;protein_id=WP_032074820.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 172718 173879 . - . ID=gene-NYQ15_RS00910;Name=NYQ15_RS00910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS00910;pseudo=true NZ_CP103431.1 Protein Homology CDS 172718 173879 . - 0 ID=cds-NYQ15_RS00910;Parent=gene-NYQ15_RS00910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819230.1;locus_tag=NYQ15_RS00910;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 173919 175067 . - . ID=gene-NYQ15_RS00915;Name=NYQ15_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00915 NZ_CP103431.1 Protein Homology CDS 173919 175067 . - 0 ID=cds-WP_259431014.1;Parent=gene-NYQ15_RS00915;Dbxref=GenBank:WP_259431014.1;Name=WP_259431014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771562.1;locus_tag=NYQ15_RS00915;product=hypothetical protein;protein_id=WP_259431014.1;transl_table=11 NZ_CP103431.1 RefSeq gene 175100 175627 . - . ID=gene-NYQ15_RS00920;Name=NYQ15_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00920 NZ_CP103431.1 Protein Homology CDS 175100 175627 . - 0 ID=cds-WP_043880689.1;Parent=gene-NYQ15_RS00920;Dbxref=GenBank:WP_043880689.1;Name=WP_043880689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253250.1;locus_tag=NYQ15_RS00920;product=hypothetical protein;protein_id=WP_043880689.1;transl_table=11 NZ_CP103431.1 RefSeq gene 175594 176244 . - . ID=gene-NYQ15_RS00925;Name=NYQ15_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00925 NZ_CP103431.1 GeneMarkS-2+ CDS 175594 176244 . - 0 ID=cds-WP_259411730.1;Parent=gene-NYQ15_RS00925;Dbxref=GenBank:WP_259411730.1;Name=WP_259411730.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS00925;product=hypothetical protein;protein_id=WP_259411730.1;transl_table=11 NZ_CP103431.1 RefSeq gene 176251 176514 . - . ID=gene-NYQ15_RS00930;Name=NYQ15_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00930 NZ_CP103431.1 Protein Homology CDS 176251 176514 . - 0 ID=cds-WP_259431015.1;Parent=gene-NYQ15_RS00930;Dbxref=GenBank:WP_259431015.1;Name=WP_259431015.1;Ontology_term=GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glutamic-type endopeptidase activity|0070007||IEA;inference=COORDINATES: protein motif:HMM:NF014566.5;locus_tag=NYQ15_RS00930;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_259431015.1;transl_table=11 NZ_CP103431.1 RefSeq gene 176556 177332 . - . ID=gene-NYQ15_RS00935;Name=NYQ15_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00935 NZ_CP103431.1 Protein Homology CDS 176556 177332 . - 0 ID=cds-WP_310795120.1;Parent=gene-NYQ15_RS00935;Dbxref=GenBank:WP_310795120.1;Name=WP_310795120.1;Ontology_term=GO:0030551;gbkey=CDS;go_function=cyclic nucleotide binding|0030551||IEA;inference=COORDINATES: protein motif:HMM:NF012257.5;locus_tag=NYQ15_RS00935;product=cyclic nucleotide-binding domain-containing protein;protein_id=WP_310795120.1;transl_table=11 NZ_CP103431.1 RefSeq gene 177663 178667 . + . ID=gene-NYQ15_RS00940;Name=NYQ15_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00940 NZ_CP103431.1 Protein Homology CDS 177663 178667 . + 0 ID=cds-WP_005772384.1;Parent=gene-NYQ15_RS00940;Dbxref=GenBank:WP_005772384.1;Name=WP_005772384.1;Ontology_term=GO:0042158,GO:0008961,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771564.1;locus_tag=NYQ15_RS00940;product=prolipoprotein diacylglyceryl transferase family protein;protein_id=WP_005772384.1;transl_table=11 NZ_CP103431.1 RefSeq gene 178724 179935 . + . ID=gene-NYQ15_RS00945;Name=NYQ15_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00945 NZ_CP103431.1 Protein Homology CDS 178724 179935 . + 0 ID=cds-WP_010957428.1;Parent=gene-NYQ15_RS00945;Dbxref=GenBank:WP_010957428.1;Name=WP_010957428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819239.2;locus_tag=NYQ15_RS00945;product=hypothetical protein;protein_id=WP_010957428.1;transl_table=11 NZ_CP103431.1 RefSeq gene 179963 181330 . - . ID=gene-NYQ15_RS00950;Name=NYQ15_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00950 NZ_CP103431.1 Protein Homology CDS 179963 181330 . - 0 ID=cds-WP_005771566.1;Parent=gene-NYQ15_RS00950;Dbxref=GenBank:WP_005771566.1;Name=WP_005771566.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819240.1;locus_tag=NYQ15_RS00950;product=L-serine ammonia-lyase;protein_id=WP_005771566.1;transl_table=11 NZ_CP103431.1 RefSeq gene 181511 182812 . + . ID=gene-NYQ15_RS00955;Name=NYQ15_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00955 NZ_CP103431.1 Protein Homology CDS 181511 182812 . + 0 ID=cds-WP_005771568.1;Parent=gene-NYQ15_RS00955;Dbxref=GenBank:WP_005771568.1;Name=WP_005771568.1;Ontology_term=GO:0006810,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819241.1;locus_tag=NYQ15_RS00955;product=AmpG family muropeptide MFS transporter;protein_id=WP_005771568.1;transl_table=11 NZ_CP103431.1 RefSeq gene 182899 183111 . + . ID=gene-NYQ15_RS00960;Name=NYQ15_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00960 NZ_CP103431.1 Protein Homology CDS 182899 183111 . + 0 ID=cds-WP_005771570.1;Parent=gene-NYQ15_RS00960;Dbxref=GenBank:WP_005771570.1;Name=WP_005771570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819242.1;locus_tag=NYQ15_RS00960;product=hypothetical protein;protein_id=WP_005771570.1;transl_table=11 NZ_CP103431.1 RefSeq gene 183181 185970 . - . ID=gene-NYQ15_RS00965;Name=NYQ15_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00965 NZ_CP103431.1 Protein Homology CDS 183181 185970 . - 0 ID=cds-WP_005771572.1;Parent=gene-NYQ15_RS00965;Dbxref=GenBank:WP_005771572.1;Name=WP_005771572.1;Ontology_term=GO:0009306,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819243.1;locus_tag=NYQ15_RS00965;product=translocation/assembly module TamB domain-containing protein;protein_id=WP_005771572.1;transl_table=11 NZ_CP103431.1 RefSeq gene 185967 187703 . - . ID=gene-NYQ15_RS00970;Name=NYQ15_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00970 NZ_CP103431.1 Protein Homology CDS 185967 187703 . - 0 ID=cds-WP_005772391.1;Parent=gene-NYQ15_RS00970;Dbxref=GenBank:WP_005772391.1;Name=WP_005772391.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819244.1;locus_tag=NYQ15_RS00970;product=autotransporter assembly complex family protein;protein_id=WP_005772391.1;transl_table=11 NZ_CP103431.1 RefSeq gene 187844 188800 . + . ID=gene-NYQ15_RS00975;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=NYQ15_RS00975 NZ_CP103431.1 Protein Homology CDS 187844 188800 . + 0 ID=cds-WP_005771577.1;Parent=gene-NYQ15_RS00975;Dbxref=GenBank:WP_005771577.1;Name=WP_005771577.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819245.1;locus_tag=NYQ15_RS00975;product=type I pantothenate kinase;protein_id=WP_005771577.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 188801 189690 . + . ID=gene-NYQ15_RS00980;Name=NYQ15_RS00980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS00980;pseudo=true NZ_CP103431.1 Protein Homology CDS 188801 189690 . + 0 ID=cds-NYQ15_RS00980;Parent=gene-NYQ15_RS00980;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819246.2;locus_tag=NYQ15_RS00980;product=aldose epimerase;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 189771 190166 . - . ID=gene-NYQ15_RS00985;Name=NYQ15_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00985 NZ_CP103431.1 Protein Homology CDS 189771 190166 . - 0 ID=cds-WP_005771581.1;Parent=gene-NYQ15_RS00985;Dbxref=GenBank:WP_005771581.1;Name=WP_005771581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819247.1;locus_tag=NYQ15_RS00985;product=CBU_0201 family Dot/Icm type IV secretion system effector;protein_id=WP_005771581.1;transl_table=11 NZ_CP103431.1 RefSeq gene 190228 190488 . + . ID=gene-NYQ15_RS00990;Name=NYQ15_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS00990 NZ_CP103431.1 GeneMarkS-2+ CDS 190228 190488 . + 0 ID=cds-WP_005771582.1;Parent=gene-NYQ15_RS00990;Dbxref=GenBank:WP_005771582.1;Name=WP_005771582.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS00990;product=hypothetical protein;protein_id=WP_005771582.1;transl_table=11 NZ_CP103431.1 RefSeq gene 191076 192485 . + . ID=gene-NYQ15_RS00995;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=NYQ15_RS00995 NZ_CP103431.1 Protein Homology CDS 191076 192485 . + 0 ID=cds-WP_005771584.1;Parent=gene-NYQ15_RS00995;Dbxref=GenBank:WP_005771584.1;Name=WP_005771584.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220127.1;locus_tag=NYQ15_RS00995;product=glutamate--tRNA ligase;protein_id=WP_005771584.1;transl_table=11 NZ_CP103431.1 RefSeq gene 192547 192939 . + . ID=gene-NYQ15_RS01000;Name=NYQ15_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01000 NZ_CP103431.1 Protein Homology CDS 192547 192939 . + 0 ID=cds-WP_005771586.1;Parent=gene-NYQ15_RS01000;Dbxref=GenBank:WP_005771586.1;Name=WP_005771586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819252.1;locus_tag=NYQ15_RS01000;product=hypothetical protein;protein_id=WP_005771586.1;transl_table=11 NZ_CP103431.1 RefSeq gene 193046 193118 . + . ID=gene-NYQ15_RS01005;Name=NYQ15_RS01005;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS01005 NZ_CP103431.1 tRNAscan-SE tRNA 193046 193118 . + . ID=rna-NYQ15_RS01005;Parent=gene-NYQ15_RS01005;anticodon=(pos:193079..193081);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS01005;product=tRNA-Thr NZ_CP103431.1 tRNAscan-SE exon 193046 193118 . + . ID=exon-NYQ15_RS01005-1;Parent=rna-NYQ15_RS01005;anticodon=(pos:193079..193081);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS01005;product=tRNA-Thr NZ_CP103431.1 RefSeq gene 193219 193494 . + . ID=gene-NYQ15_RS01010;Name=NYQ15_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01010 NZ_CP103431.1 GeneMarkS-2+ CDS 193219 193494 . + 0 ID=cds-WP_005772388.1;Parent=gene-NYQ15_RS01010;Dbxref=GenBank:WP_005772388.1;Name=WP_005772388.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS01010;product=hypothetical protein;protein_id=WP_005772388.1;transl_table=11 NZ_CP103431.1 RefSeq gene 193828 194202 . + . ID=gene-NYQ15_RS01015;Name=NYQ15_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01015 NZ_CP103431.1 Protein Homology CDS 193828 194202 . + 0 ID=cds-WP_230455820.1;Parent=gene-NYQ15_RS01015;Dbxref=GenBank:WP_230455820.1;Name=WP_230455820.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF013088.5;locus_tag=NYQ15_RS01015;product=DMT family transporter;protein_id=WP_230455820.1;transl_table=11 NZ_CP103431.1 RefSeq gene 194247 194699 . + . ID=gene-NYQ15_RS01020;Name=NYQ15_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01020 NZ_CP103431.1 Protein Homology CDS 194247 194699 . + 0 ID=cds-WP_259423775.1;Parent=gene-NYQ15_RS01020;Dbxref=GenBank:WP_259423775.1;Name=WP_259423775.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF013088.5;locus_tag=NYQ15_RS01020;product=DMT family transporter;protein_id=WP_259423775.1;transl_table=11 NZ_CP103431.1 RefSeq gene 194749 195729 . + . ID=gene-NYQ15_RS01025;Name=NYQ15_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01025 NZ_CP103431.1 Protein Homology CDS 194749 195729 . + 0 ID=cds-WP_259411818.1;Parent=gene-NYQ15_RS01025;Dbxref=GenBank:WP_259411818.1;Name=WP_259411818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819254.1;locus_tag=NYQ15_RS01025;product=hypothetical protein;protein_id=WP_259411818.1;transl_table=11 NZ_CP103431.1 RefSeq gene 196129 197352 . + . ID=gene-NYQ15_RS01035;Name=elpA;gbkey=Gene;gene=elpA;gene_biotype=protein_coding;locus_tag=NYQ15_RS01035 NZ_CP103431.1 Protein Homology CDS 196129 197352 . + 0 ID=cds-WP_259431016.1;Parent=gene-NYQ15_RS01035;Dbxref=GenBank:WP_259431016.1;Name=WP_259431016.1;gbkey=CDS;gene=elpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997304.1;locus_tag=NYQ15_RS01035;product=Dot/Icm T4SS effector ElpA;protein_id=WP_259431016.1;transl_table=11 NZ_CP103431.1 RefSeq gene 197524 197682 . - . ID=gene-NYQ15_RS01040;Name=NYQ15_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01040 NZ_CP103431.1 Protein Homology CDS 197524 197682 . - 0 ID=cds-WP_011997303.1;Parent=gene-NYQ15_RS01040;Dbxref=GenBank:WP_011997303.1;Name=WP_011997303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819258.1;locus_tag=NYQ15_RS01040;product=hypothetical protein;protein_id=WP_011997303.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 197843 197944 . + . ID=gene-NYQ15_RS01045;Name=NYQ15_RS01045;end_range=197944,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS01045;partial=true;pseudo=true;start_range=.,197843 NZ_CP103431.1 Protein Homology CDS 197843 197944 . + 0 ID=cds-NYQ15_RS01045;Parent=gene-NYQ15_RS01045;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=197944,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332956.1;locus_tag=NYQ15_RS01045;partial=true;product=hypothetical protein;pseudo=true;start_range=.,197843;transl_table=11 NZ_CP103431.1 RefSeq gene 198066 198785 . + . ID=gene-NYQ15_RS01050;Name=NYQ15_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01050 NZ_CP103431.1 Protein Homology CDS 198066 198785 . + 0 ID=cds-WP_005772394.1;Parent=gene-NYQ15_RS01050;Dbxref=GenBank:WP_005772394.1;Name=WP_005772394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819259.1;locus_tag=NYQ15_RS01050;product=Bax inhibitor-1/YccA family protein;protein_id=WP_005772394.1;transl_table=11 NZ_CP103431.1 RefSeq gene 198840 200438 . - . ID=gene-NYQ15_RS01055;Name=NYQ15_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01055 NZ_CP103431.1 Protein Homology CDS 198840 200438 . - 0 ID=cds-WP_005772382.1;Parent=gene-NYQ15_RS01055;Dbxref=GenBank:WP_005772382.1;Name=WP_005772382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819260.2;locus_tag=NYQ15_RS01055;product=SH3 domain-containing protein;protein_id=WP_005772382.1;transl_table=11 NZ_CP103431.1 RefSeq gene 200623 201399 . + . ID=gene-NYQ15_RS01060;Name=NYQ15_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01060 NZ_CP103431.1 GeneMarkS-2+ CDS 200623 201399 . + 0 ID=cds-WP_259411732.1;Parent=gene-NYQ15_RS01060;Dbxref=GenBank:WP_259411732.1;Name=WP_259411732.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS01060;product=hypothetical protein;protein_id=WP_259411732.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 202296 203844 . + . ID=gene-NYQ15_RS01070;Name=NYQ15_RS01070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS01070;pseudo=true NZ_CP103431.1 Protein Homology CDS 202296 203844 . + 0 ID=cds-NYQ15_RS01070;Parent=gene-NYQ15_RS01070;Note=frameshifted;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819263.1;locus_tag=NYQ15_RS01070;product=cytochrome ubiquinol oxidase subunit I;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 203853 204998 . + . ID=gene-NYQ15_RS01075;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=NYQ15_RS01075 NZ_CP103431.1 Protein Homology CDS 203853 204998 . + 0 ID=cds-WP_005772389.1;Parent=gene-NYQ15_RS01075;Dbxref=GenBank:WP_005772389.1;Name=WP_005772389.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772389.1;locus_tag=NYQ15_RS01075;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_005772389.1;transl_table=11 NZ_CP103431.1 RefSeq gene 205005 205124 . + . ID=gene-NYQ15_RS01080;Name=NYQ15_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01080 NZ_CP103431.1 Protein Homology CDS 205005 205124 . + 0 ID=cds-WP_005771605.1;Parent=gene-NYQ15_RS01080;Dbxref=GenBank:WP_005771605.1;Name=WP_005771605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819264.1;locus_tag=NYQ15_RS01080;product=hypothetical protein;protein_id=WP_005771605.1;transl_table=11 NZ_CP103431.1 RefSeq gene 205117 205848 . + . ID=gene-NYQ15_RS01085;Name=NYQ15_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01085 NZ_CP103431.1 Protein Homology CDS 205117 205848 . + 0 ID=cds-WP_005771607.1;Parent=gene-NYQ15_RS01085;Dbxref=GenBank:WP_005771607.1;Name=WP_005771607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570417.1;locus_tag=NYQ15_RS01085;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=WP_005771607.1;transl_table=11 NZ_CP103431.1 RefSeq gene 206001 206082 . + . ID=gene-NYQ15_RS01090;Name=NYQ15_RS01090;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS01090 NZ_CP103431.1 tRNAscan-SE tRNA 206001 206082 . + . ID=rna-NYQ15_RS01090;Parent=gene-NYQ15_RS01090;anticodon=(pos:206035..206037);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS01090;product=tRNA-Tyr NZ_CP103431.1 tRNAscan-SE exon 206001 206082 . + . ID=exon-NYQ15_RS01090-1;Parent=rna-NYQ15_RS01090;anticodon=(pos:206035..206037);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS01090;product=tRNA-Tyr NZ_CP103431.1 RefSeq gene 206117 206233 . + . ID=gene-NYQ15_RS01095;Name=NYQ15_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01095 NZ_CP103431.1 Protein Homology CDS 206117 206233 . + 0 ID=cds-WP_005772393.1;Parent=gene-NYQ15_RS01095;Dbxref=GenBank:WP_005772393.1;Name=WP_005772393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332953.1;locus_tag=NYQ15_RS01095;product=hypothetical protein;protein_id=WP_005772393.1;transl_table=11 NZ_CP103431.1 RefSeq gene 206213 206283 . + . ID=gene-NYQ15_RS01100;Name=NYQ15_RS01100;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS01100 NZ_CP103431.1 tRNAscan-SE tRNA 206213 206283 . + . ID=rna-NYQ15_RS01100;Parent=gene-NYQ15_RS01100;anticodon=(pos:206245..206247);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS01100;product=tRNA-Gly NZ_CP103431.1 tRNAscan-SE exon 206213 206283 . + . ID=exon-NYQ15_RS01100-1;Parent=rna-NYQ15_RS01100;anticodon=(pos:206245..206247);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS01100;product=tRNA-Gly NZ_CP103431.1 RefSeq gene 206286 206361 . + . ID=gene-NYQ15_RS01105;Name=NYQ15_RS01105;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS01105 NZ_CP103431.1 tRNAscan-SE tRNA 206286 206361 . + . ID=rna-NYQ15_RS01105;Parent=gene-NYQ15_RS01105;anticodon=(pos:206319..206321);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS01105;product=tRNA-Thr NZ_CP103431.1 tRNAscan-SE exon 206286 206361 . + . ID=exon-NYQ15_RS01105-1;Parent=rna-NYQ15_RS01105;anticodon=(pos:206319..206321);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS01105;product=tRNA-Thr NZ_CP103431.1 RefSeq gene 206435 206515 . + . ID=gene-NYQ15_RS01110;Name=NYQ15_RS01110;end_range=206515,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01110;partial=true NZ_CP103431.1 Protein Homology CDS 206435 206515 . + 0 ID=cds-WP_259431100.1;Parent=gene-NYQ15_RS01110;Dbxref=GenBank:WP_259431100.1;Name=WP_259431100.1;end_range=206515,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147227.1;locus_tag=NYQ15_RS01110;partial=true;product=hypothetical protein;protein_id=WP_259431100.1;transl_table=11 NZ_CP103431.1 RefSeq gene 207758 207833 . + . ID=gene-NYQ15_RS01115;Name=NYQ15_RS01115;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS01115 NZ_CP103431.1 tRNAscan-SE tRNA 207758 207833 . + . ID=rna-NYQ15_RS01115;Parent=gene-NYQ15_RS01115;anticodon=(pos:207791..207793);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS01115;product=tRNA-Trp NZ_CP103431.1 tRNAscan-SE exon 207758 207833 . + . ID=exon-NYQ15_RS01115-1;Parent=rna-NYQ15_RS01115;anticodon=(pos:207791..207793);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS01115;product=tRNA-Trp NZ_CP103431.1 RefSeq gene 207875 208258 . + . ID=gene-NYQ15_RS01120;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=NYQ15_RS01120 NZ_CP103431.1 Protein Homology CDS 207875 208258 . + 0 ID=cds-WP_005771610.1;Parent=gene-NYQ15_RS01120;Dbxref=GenBank:WP_005771610.1;Name=WP_005771610.1;Ontology_term=GO:0009306,GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secE;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819268.1;locus_tag=NYQ15_RS01120;product=preprotein translocase subunit SecE;protein_id=WP_005771610.1;transl_table=11 NZ_CP103431.1 RefSeq gene 208328 208849 . + . ID=gene-NYQ15_RS01125;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=NYQ15_RS01125 NZ_CP103431.1 Protein Homology CDS 208328 208849 . + 0 ID=cds-WP_005771613.1;Parent=gene-NYQ15_RS01125;Dbxref=GenBank:WP_005771613.1;Name=WP_005771613.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819269.3;locus_tag=NYQ15_RS01125;product=transcription termination/antitermination protein NusG;protein_id=WP_005771613.1;transl_table=11 NZ_CP103431.1 RefSeq gene 208974 209411 . + . ID=gene-NYQ15_RS01130;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=NYQ15_RS01130 NZ_CP103431.1 Protein Homology CDS 208974 209411 . + 0 ID=cds-WP_005771614.1;Parent=gene-NYQ15_RS01130;Dbxref=GenBank:WP_005771614.1;Name=WP_005771614.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819270.1;locus_tag=NYQ15_RS01130;product=50S ribosomal protein L11;protein_id=WP_005771614.1;transl_table=11 NZ_CP103431.1 RefSeq gene 209411 210109 . + . ID=gene-NYQ15_RS01135;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=NYQ15_RS01135 NZ_CP103431.1 Protein Homology CDS 209411 210109 . + 0 ID=cds-WP_005771615.1;Parent=gene-NYQ15_RS01135;Dbxref=GenBank:WP_005771615.1;Name=WP_005771615.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819271.1;locus_tag=NYQ15_RS01135;product=50S ribosomal protein L1;protein_id=WP_005771615.1;transl_table=11 NZ_CP103431.1 RefSeq gene 210363 210887 . + . ID=gene-NYQ15_RS01140;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=NYQ15_RS01140 NZ_CP103431.1 Protein Homology CDS 210363 210887 . + 0 ID=cds-WP_005771616.1;Parent=gene-NYQ15_RS01140;Dbxref=GenBank:WP_005771616.1;Name=WP_005771616.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819272.1;locus_tag=NYQ15_RS01140;product=50S ribosomal protein L10;protein_id=WP_005771616.1;transl_table=11 NZ_CP103431.1 RefSeq gene 210921 211301 . + . ID=gene-NYQ15_RS01145;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=NYQ15_RS01145 NZ_CP103431.1 Protein Homology CDS 210921 211301 . + 0 ID=cds-WP_005771617.1;Parent=gene-NYQ15_RS01145;Dbxref=GenBank:WP_005771617.1;Name=WP_005771617.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819273.1;locus_tag=NYQ15_RS01145;product=50S ribosomal protein L7/L12;protein_id=WP_005771617.1;transl_table=11 NZ_CP103431.1 RefSeq gene 211314 211433 . + . ID=gene-NYQ15_RS01150;Name=NYQ15_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01150 NZ_CP103431.1 Protein Homology CDS 211314 211433 . + 0 ID=cds-WP_010957446.1;Parent=gene-NYQ15_RS01150;Dbxref=GenBank:WP_010957446.1;Name=WP_010957446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819274.1;locus_tag=NYQ15_RS01150;product=hypothetical protein;protein_id=WP_010957446.1;transl_table=11 NZ_CP103431.1 RefSeq gene 211448 215581 . + . ID=gene-NYQ15_RS01155;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=NYQ15_RS01155 NZ_CP103431.1 Protein Homology CDS 211448 215581 . + 0 ID=cds-WP_012570649.1;Parent=gene-NYQ15_RS01155;Dbxref=GenBank:WP_012570649.1;Name=WP_012570649.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819275.2;locus_tag=NYQ15_RS01155;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_012570649.1;transl_table=11 NZ_CP103431.1 RefSeq gene 215850 220094 . + . ID=gene-NYQ15_RS01160;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=NYQ15_RS01160 NZ_CP103431.1 Protein Homology CDS 215850 220094 . + 0 ID=cds-WP_005771620.1;Parent=gene-NYQ15_RS01160;Dbxref=GenBank:WP_005771620.1;Name=WP_005771620.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819276.1;locus_tag=NYQ15_RS01160;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_005771620.1;transl_table=11 NZ_CP103431.1 RefSeq gene 220437 220811 . + . ID=gene-NYQ15_RS01165;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=NYQ15_RS01165 NZ_CP103431.1 Protein Homology CDS 220437 220811 . + 0 ID=cds-WP_005771621.1;Parent=gene-NYQ15_RS01165;Dbxref=GenBank:WP_005771621.1;Name=WP_005771621.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819277.3;locus_tag=NYQ15_RS01165;product=30S ribosomal protein S12;protein_id=WP_005771621.1;transl_table=11 NZ_CP103431.1 RefSeq gene 220824 221399 . + . ID=gene-NYQ15_RS01170;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=NYQ15_RS01170 NZ_CP103431.1 Protein Homology CDS 220824 221399 . + 0 ID=cds-WP_005771622.1;Parent=gene-NYQ15_RS01170;Dbxref=GenBank:WP_005771622.1;Name=WP_005771622.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819278.1;locus_tag=NYQ15_RS01170;product=30S ribosomal protein S7;protein_id=WP_005771622.1;transl_table=11 NZ_CP103431.1 RefSeq gene 221409 223508 . + . ID=gene-NYQ15_RS01175;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=NYQ15_RS01175 NZ_CP103431.1 Protein Homology CDS 221409 223508 . + 0 ID=cds-WP_012570652.1;Parent=gene-NYQ15_RS01175;Dbxref=GenBank:WP_012570652.1;Name=WP_012570652.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819279.1;locus_tag=NYQ15_RS01175;product=elongation factor G;protein_id=WP_012570652.1;transl_table=11 NZ_CP103431.1 RefSeq gene 223524 223584 . + . ID=gene-NYQ15_RS01180;Name=NYQ15_RS01180;end_range=223584,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01180;partial=true NZ_CP103431.1 Protein Homology CDS 223524 223584 . + 0 ID=cds-WP_259431101.1;Parent=gene-NYQ15_RS01180;Dbxref=GenBank:WP_259431101.1;Name=WP_259431101.1;end_range=223584,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819280.1;locus_tag=NYQ15_RS01180;partial=true;product=hypothetical protein;protein_id=WP_259431101.1;transl_table=11 NZ_CP103431.1 RefSeq gene 224911 225243 . + . ID=gene-NYQ15_RS01185;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=NYQ15_RS01185 NZ_CP103431.1 Protein Homology CDS 224911 225243 . + 0 ID=cds-WP_005771548.1;Parent=gene-NYQ15_RS01185;Dbxref=GenBank:WP_005771548.1;Name=WP_005771548.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771548.1;locus_tag=NYQ15_RS01185;product=30S ribosomal protein S10;protein_id=WP_005771548.1;transl_table=11 NZ_CP103431.1 RefSeq gene 225265 225918 . + . ID=gene-NYQ15_RS01190;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=NYQ15_RS01190 NZ_CP103431.1 Protein Homology CDS 225265 225918 . + 0 ID=cds-WP_005771546.1;Parent=gene-NYQ15_RS01190;Dbxref=GenBank:WP_005771546.1;Name=WP_005771546.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819282.1;locus_tag=NYQ15_RS01190;product=50S ribosomal protein L3;protein_id=WP_005771546.1;transl_table=11 NZ_CP103431.1 RefSeq gene 225915 226535 . + . ID=gene-NYQ15_RS01195;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=NYQ15_RS01195 NZ_CP103431.1 Protein Homology CDS 225915 226535 . + 0 ID=cds-WP_010957454.1;Parent=gene-NYQ15_RS01195;Dbxref=GenBank:WP_010957454.1;Name=WP_010957454.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819283.2;locus_tag=NYQ15_RS01195;product=50S ribosomal protein L4;protein_id=WP_010957454.1;transl_table=11 NZ_CP103431.1 RefSeq gene 226532 226819 . + . ID=gene-NYQ15_RS01200;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=NYQ15_RS01200 NZ_CP103431.1 Protein Homology CDS 226532 226819 . + 0 ID=cds-WP_005771542.1;Parent=gene-NYQ15_RS01200;Dbxref=GenBank:WP_005771542.1;Name=WP_005771542.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819284.1;locus_tag=NYQ15_RS01200;product=50S ribosomal protein L23;protein_id=WP_005771542.1;transl_table=11 NZ_CP103431.1 RefSeq gene 226839 227666 . + . ID=gene-NYQ15_RS01205;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=NYQ15_RS01205 NZ_CP103431.1 Protein Homology CDS 226839 227666 . + 0 ID=cds-WP_005771540.1;Parent=gene-NYQ15_RS01205;Dbxref=GenBank:WP_005771540.1;Name=WP_005771540.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819285.1;locus_tag=NYQ15_RS01205;product=50S ribosomal protein L2;protein_id=WP_005771540.1;transl_table=11 NZ_CP103431.1 RefSeq gene 227679 227966 . + . ID=gene-NYQ15_RS01210;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=NYQ15_RS01210 NZ_CP103431.1 Protein Homology CDS 227679 227966 . + 0 ID=cds-WP_005771538.1;Parent=gene-NYQ15_RS01210;Dbxref=GenBank:WP_005771538.1;Name=WP_005771538.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819286.1;locus_tag=NYQ15_RS01210;product=30S ribosomal protein S19;protein_id=WP_005771538.1;transl_table=11 NZ_CP103431.1 RefSeq gene 227966 228313 . + . ID=gene-NYQ15_RS01215;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=NYQ15_RS01215 NZ_CP103431.1 Protein Homology CDS 227966 228313 . + 0 ID=cds-WP_005771536.1;Parent=gene-NYQ15_RS01215;Dbxref=GenBank:WP_005771536.1;Name=WP_005771536.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819287.1;locus_tag=NYQ15_RS01215;product=50S ribosomal protein L22;protein_id=WP_005771536.1;transl_table=11 NZ_CP103431.1 RefSeq gene 228313 228996 . + . ID=gene-NYQ15_RS01220;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=NYQ15_RS01220 NZ_CP103431.1 Protein Homology CDS 228313 228996 . + 0 ID=cds-WP_005771534.1;Parent=gene-NYQ15_RS01220;Dbxref=GenBank:WP_005771534.1;Name=WP_005771534.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819288.1;locus_tag=NYQ15_RS01220;product=30S ribosomal protein S3;protein_id=WP_005771534.1;transl_table=11 NZ_CP103431.1 RefSeq gene 229008 229421 . + . ID=gene-NYQ15_RS01225;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=NYQ15_RS01225 NZ_CP103431.1 Protein Homology CDS 229008 229421 . + 0 ID=cds-WP_005771532.1;Parent=gene-NYQ15_RS01225;Dbxref=GenBank:WP_005771532.1;Name=WP_005771532.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819289.1;locus_tag=NYQ15_RS01225;product=50S ribosomal protein L16;protein_id=WP_005771532.1;transl_table=11 NZ_CP103431.1 RefSeq gene 229422 229619 . + . ID=gene-NYQ15_RS01230;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=NYQ15_RS01230 NZ_CP103431.1 Protein Homology CDS 229422 229619 . + 0 ID=cds-WP_005771530.1;Parent=gene-NYQ15_RS01230;Dbxref=GenBank:WP_005771530.1;Name=WP_005771530.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819290.1;locus_tag=NYQ15_RS01230;product=50S ribosomal protein L29;protein_id=WP_005771530.1;transl_table=11 NZ_CP103431.1 RefSeq gene 229630 229881 . + . ID=gene-NYQ15_RS01235;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=NYQ15_RS01235 NZ_CP103431.1 Protein Homology CDS 229630 229881 . + 0 ID=cds-WP_012570412.1;Parent=gene-NYQ15_RS01235;Dbxref=GenBank:WP_012570412.1;Name=WP_012570412.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819291.2;locus_tag=NYQ15_RS01235;product=30S ribosomal protein S17;protein_id=WP_012570412.1;transl_table=11 NZ_CP103431.1 RefSeq gene 229892 230260 . + . ID=gene-NYQ15_RS01240;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=NYQ15_RS01240 NZ_CP103431.1 Protein Homology CDS 229892 230260 . + 0 ID=cds-WP_005772976.1;Parent=gene-NYQ15_RS01240;Dbxref=GenBank:WP_005772976.1;Name=WP_005772976.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=NYQ15_RS01240;product=50S ribosomal protein L14;protein_id=WP_005772976.1;transl_table=11 NZ_CP103431.1 RefSeq gene 230272 230595 . + . ID=gene-NYQ15_RS01245;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=NYQ15_RS01245 NZ_CP103431.1 Protein Homology CDS 230272 230595 . + 0 ID=cds-WP_005771523.1;Parent=gene-NYQ15_RS01245;Dbxref=GenBank:WP_005771523.1;Name=WP_005771523.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819293.1;locus_tag=NYQ15_RS01245;product=50S ribosomal protein L24;protein_id=WP_005771523.1;transl_table=11 NZ_CP103431.1 RefSeq gene 230712 231260 . + . ID=gene-NYQ15_RS01250;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=NYQ15_RS01250 NZ_CP103431.1 Protein Homology CDS 230712 231260 . + 0 ID=cds-WP_005771521.1;Parent=gene-NYQ15_RS01250;Dbxref=GenBank:WP_005771521.1;Name=WP_005771521.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819294.1;locus_tag=NYQ15_RS01250;product=50S ribosomal protein L5;protein_id=WP_005771521.1;transl_table=11 NZ_CP103431.1 RefSeq gene 231265 231564 . + . ID=gene-NYQ15_RS01255;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=NYQ15_RS01255 NZ_CP103431.1 Protein Homology CDS 231265 231564 . + 0 ID=cds-WP_005771520.1;Parent=gene-NYQ15_RS01255;Dbxref=GenBank:WP_005771520.1;Name=WP_005771520.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819295.1;locus_tag=NYQ15_RS01255;product=30S ribosomal protein S14;protein_id=WP_005771520.1;transl_table=11 NZ_CP103431.1 RefSeq gene 231570 231959 . + . ID=gene-NYQ15_RS01260;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=NYQ15_RS01260 NZ_CP103431.1 Protein Homology CDS 231570 231959 . + 0 ID=cds-WP_032074828.1;Parent=gene-NYQ15_RS01260;Dbxref=GenBank:WP_032074828.1;Name=WP_032074828.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819296.3;locus_tag=NYQ15_RS01260;product=30S ribosomal protein S8;protein_id=WP_032074828.1;transl_table=11 NZ_CP103431.1 RefSeq gene 231997 232533 . + . ID=gene-NYQ15_RS01265;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=NYQ15_RS01265 NZ_CP103431.1 Protein Homology CDS 231997 232533 . + 0 ID=cds-WP_005771518.1;Parent=gene-NYQ15_RS01265;Dbxref=GenBank:WP_005771518.1;Name=WP_005771518.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819297.1;locus_tag=NYQ15_RS01265;product=50S ribosomal protein L6;protein_id=WP_005771518.1;transl_table=11 NZ_CP103431.1 RefSeq gene 232533 232886 . + . ID=gene-NYQ15_RS01270;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=NYQ15_RS01270 NZ_CP103431.1 Protein Homology CDS 232533 232886 . + 0 ID=cds-WP_005771517.1;Parent=gene-NYQ15_RS01270;Dbxref=GenBank:WP_005771517.1;Name=WP_005771517.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=NYQ15_RS01270;product=50S ribosomal protein L18;protein_id=WP_005771517.1;transl_table=11 NZ_CP103431.1 RefSeq gene 232898 233404 . + . ID=gene-NYQ15_RS01275;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=NYQ15_RS01275 NZ_CP103431.1 Protein Homology CDS 232898 233404 . + 0 ID=cds-WP_005771515.1;Parent=gene-NYQ15_RS01275;Dbxref=GenBank:WP_005771515.1;Name=WP_005771515.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819299.1;locus_tag=NYQ15_RS01275;product=30S ribosomal protein S5;protein_id=WP_005771515.1;transl_table=11 NZ_CP103431.1 RefSeq gene 233408 233599 . + . ID=gene-NYQ15_RS01280;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=NYQ15_RS01280 NZ_CP103431.1 Protein Homology CDS 233408 233599 . + 0 ID=cds-WP_005771513.1;Parent=gene-NYQ15_RS01280;Dbxref=GenBank:WP_005771513.1;Name=WP_005771513.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819300.1;locus_tag=NYQ15_RS01280;product=50S ribosomal protein L30;protein_id=WP_005771513.1;transl_table=11 NZ_CP103431.1 RefSeq gene 233602 234033 . + . ID=gene-NYQ15_RS01285;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=NYQ15_RS01285 NZ_CP103431.1 Protein Homology CDS 233602 234033 . + 0 ID=cds-WP_098953216.1;Parent=gene-NYQ15_RS01285;Dbxref=GenBank:WP_098953216.1;Name=WP_098953216.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819301.1;locus_tag=NYQ15_RS01285;product=50S ribosomal protein L15;protein_id=WP_098953216.1;transl_table=11 NZ_CP103431.1 RefSeq gene 234051 235379 . + . ID=gene-NYQ15_RS01290;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=NYQ15_RS01290 NZ_CP103431.1 Protein Homology CDS 234051 235379 . + 0 ID=cds-WP_005771508.1;Parent=gene-NYQ15_RS01290;Dbxref=GenBank:WP_005771508.1;Name=WP_005771508.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819302.1;locus_tag=NYQ15_RS01290;product=preprotein translocase subunit SecY;protein_id=WP_005771508.1;transl_table=11 NZ_CP103431.1 RefSeq gene 235392 235514 . + . ID=gene-NYQ15_RS01295;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=NYQ15_RS01295 NZ_CP103431.1 Protein Homology CDS 235392 235514 . + 0 ID=cds-WP_005771506.1;Parent=gene-NYQ15_RS01295;Dbxref=GenBank:WP_005771506.1;Name=WP_005771506.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_338278.1;locus_tag=NYQ15_RS01295;product=50S ribosomal protein L36;protein_id=WP_005771506.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 235604 235681 . + . ID=gene-NYQ15_RS01300;Name=NYQ15_RS01300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS01300;partial=true;pseudo=true;start_range=.,235604 NZ_CP103431.1 Protein Homology CDS 235604 235681 . + 0 ID=cds-NYQ15_RS01300;Parent=gene-NYQ15_RS01300;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002333009.1;locus_tag=NYQ15_RS01300;partial=true;product=hypothetical protein;pseudo=true;start_range=.,235604;transl_table=11 NZ_CP103431.1 RefSeq gene 235654 235749 . + . ID=gene-NYQ15_RS01305;Name=NYQ15_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01305 NZ_CP103431.1 Protein Homology CDS 235654 235749 . + 0 ID=cds-WP_012570408.1;Parent=gene-NYQ15_RS01305;Dbxref=GenBank:WP_012570408.1;Name=WP_012570408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819303.1;locus_tag=NYQ15_RS01305;product=hypothetical protein;protein_id=WP_012570408.1;transl_table=11 NZ_CP103431.1 RefSeq gene 235754 236113 . + . ID=gene-NYQ15_RS01310;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=NYQ15_RS01310 NZ_CP103431.1 Protein Homology CDS 235754 236113 . + 0 ID=cds-WP_005771503.1;Parent=gene-NYQ15_RS01310;Dbxref=GenBank:WP_005771503.1;Name=WP_005771503.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819304.1;locus_tag=NYQ15_RS01310;product=30S ribosomal protein S13;protein_id=WP_005771503.1;transl_table=11 NZ_CP103431.1 RefSeq gene 236141 236512 . + . ID=gene-NYQ15_RS01315;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=NYQ15_RS01315 NZ_CP103431.1 Protein Homology CDS 236141 236512 . + 0 ID=cds-WP_005771499.1;Parent=gene-NYQ15_RS01315;Dbxref=GenBank:WP_005771499.1;Name=WP_005771499.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819305.1;locus_tag=NYQ15_RS01315;product=30S ribosomal protein S11;protein_id=WP_005771499.1;transl_table=11 NZ_CP103431.1 RefSeq gene 236525 237145 . + . ID=gene-NYQ15_RS01320;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=NYQ15_RS01320 NZ_CP103431.1 Protein Homology CDS 236525 237145 . + 0 ID=cds-WP_012570655.1;Parent=gene-NYQ15_RS01320;Dbxref=GenBank:WP_012570655.1;Name=WP_012570655.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819306.1;locus_tag=NYQ15_RS01320;product=30S ribosomal protein S4;protein_id=WP_012570655.1;transl_table=11 NZ_CP103431.1 RefSeq gene 237158 238141 . + . ID=gene-NYQ15_RS01325;Name=NYQ15_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01325 NZ_CP103431.1 Protein Homology CDS 237158 238141 . + 0 ID=cds-WP_005771496.1;Parent=gene-NYQ15_RS01325;Dbxref=GenBank:WP_005771496.1;Name=WP_005771496.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=NYQ15_RS01325;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_005771496.1;transl_table=11 NZ_CP103431.1 RefSeq gene 238153 238533 . + . ID=gene-NYQ15_RS01330;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=NYQ15_RS01330 NZ_CP103431.1 Protein Homology CDS 238153 238533 . + 0 ID=cds-WP_010957469.1;Parent=gene-NYQ15_RS01330;Dbxref=GenBank:WP_010957469.1;Name=WP_010957469.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819308.1;locus_tag=NYQ15_RS01330;product=50S ribosomal protein L17;protein_id=WP_010957469.1;transl_table=11 NZ_CP103431.1 RefSeq gene 238536 239762 . + . ID=gene-NYQ15_RS01335;Name=NYQ15_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01335 NZ_CP103431.1 Protein Homology CDS 238536 239762 . + 0 ID=cds-WP_032074824.1;Parent=gene-NYQ15_RS01335;Dbxref=GenBank:WP_032074824.1;Name=WP_032074824.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819309.1;locus_tag=NYQ15_RS01335;product=sugar MFS transporter;protein_id=WP_032074824.1;transl_table=11 NZ_CP103431.1 RefSeq gene 239849 240256 . + . ID=gene-NYQ15_RS01340;Name=NYQ15_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01340 NZ_CP103431.1 GeneMarkS-2+ CDS 239849 240256 . + 0 ID=cds-WP_259423778.1;Parent=gene-NYQ15_RS01340;Dbxref=GenBank:WP_259423778.1;Name=WP_259423778.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS01340;product=hypothetical protein;protein_id=WP_259423778.1;transl_table=11 NZ_CP103431.1 RefSeq gene 240286 240477 . + . ID=gene-NYQ15_RS01345;Name=NYQ15_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01345 NZ_CP103431.1 GeneMarkS-2+ CDS 240286 240477 . + 0 ID=cds-WP_259411734.1;Parent=gene-NYQ15_RS01345;Dbxref=GenBank:WP_259411734.1;Name=WP_259411734.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS01345;product=hypothetical protein;protein_id=WP_259411734.1;transl_table=11 NZ_CP103431.1 RefSeq gene 240538 241053 . + . ID=gene-NYQ15_RS01350;Name=NYQ15_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01350 NZ_CP103431.1 GeneMarkS-2+ CDS 240538 241053 . + 0 ID=cds-WP_259431017.1;Parent=gene-NYQ15_RS01350;Dbxref=GenBank:WP_259431017.1;Name=WP_259431017.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS01350;product=hypothetical protein;protein_id=WP_259431017.1;transl_table=11 NZ_CP103431.1 RefSeq gene 241289 242509 . + . ID=gene-NYQ15_RS01355;Name=NYQ15_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01355 NZ_CP103431.1 Protein Homology CDS 241289 242509 . + 0 ID=cds-WP_259431018.1;Parent=gene-NYQ15_RS01355;Dbxref=GenBank:WP_259431018.1;Name=WP_259431018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819314.1;locus_tag=NYQ15_RS01355;product=CBU_0270 family Dot/Icm type IV secretion system effector;protein_id=WP_259431018.1;transl_table=11 NZ_CP103431.1 RefSeq gene 242521 242997 . - . ID=gene-NYQ15_RS01360;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=NYQ15_RS01360 NZ_CP103431.1 Protein Homology CDS 242521 242997 . - 0 ID=cds-WP_005771486.1;Parent=gene-NYQ15_RS01360;Dbxref=GenBank:WP_005771486.1;Name=WP_005771486.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819315.1;locus_tag=NYQ15_RS01360;product=single-stranded DNA-binding protein;protein_id=WP_005771486.1;transl_table=11 NZ_CP103431.1 RefSeq gene 243047 244423 . - . ID=gene-NYQ15_RS01365;Name=NYQ15_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01365 NZ_CP103431.1 Protein Homology CDS 243047 244423 . - 0 ID=cds-WP_032074825.1;Parent=gene-NYQ15_RS01365;Dbxref=GenBank:WP_032074825.1;Name=WP_032074825.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819316.1;locus_tag=NYQ15_RS01365;product=MFS transporter;protein_id=WP_032074825.1;transl_table=11 NZ_CP103431.1 RefSeq gene 244508 245254 . - . ID=gene-NYQ15_RS01370;Name=NYQ15_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01370 NZ_CP103431.1 Protein Homology CDS 244508 245254 . - 0 ID=cds-WP_005773042.1;Parent=gene-NYQ15_RS01370;Dbxref=GenBank:WP_005773042.1;Name=WP_005773042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819317.1;locus_tag=NYQ15_RS01370;product=hypothetical protein;protein_id=WP_005773042.1;transl_table=11 NZ_CP103431.1 RefSeq gene 245510 248374 . + . ID=gene-NYQ15_RS01375;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=NYQ15_RS01375 NZ_CP103431.1 Protein Homology CDS 245510 248374 . + 0 ID=cds-WP_005771479.1;Parent=gene-NYQ15_RS01375;Dbxref=GenBank:WP_005771479.1;Name=WP_005771479.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819318.1;locus_tag=NYQ15_RS01375;product=excinuclease ABC subunit UvrA;protein_id=WP_005771479.1;transl_table=11 NZ_CP103431.1 RefSeq gene 248453 248620 . - . ID=gene-NYQ15_RS01380;Name=NYQ15_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01380 NZ_CP103431.1 Protein Homology CDS 248453 248620 . - 0 ID=cds-WP_259431019.1;Parent=gene-NYQ15_RS01380;Dbxref=GenBank:WP_259431019.1;Name=WP_259431019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570402.1;locus_tag=NYQ15_RS01380;product=hypothetical protein;protein_id=WP_259431019.1;transl_table=11 NZ_CP103431.1 RefSeq gene 248684 249769 . + . ID=gene-NYQ15_RS01385;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=NYQ15_RS01385 NZ_CP103431.1 Protein Homology CDS 248684 249769 . + 0 ID=cds-WP_005771476.1;Parent=gene-NYQ15_RS01385;Dbxref=GenBank:WP_005771476.1;Name=WP_005771476.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819319.1;locus_tag=NYQ15_RS01385;product=uroporphyrinogen decarboxylase;protein_id=WP_005771476.1;transl_table=11 NZ_CP103431.1 RefSeq gene 249762 250889 . + . ID=gene-NYQ15_RS01390;Name=NYQ15_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01390 NZ_CP103431.1 Protein Homology CDS 249762 250889 . + 0 ID=cds-WP_080592774.1;Parent=gene-NYQ15_RS01390;Dbxref=GenBank:WP_080592774.1;Name=WP_080592774.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819320.3;locus_tag=NYQ15_RS01390;product=FAD-dependent oxidoreductase;protein_id=WP_080592774.1;transl_table=11 NZ_CP103431.1 RefSeq gene 251142 251735 . + . ID=gene-NYQ15_RS01400;Name=NYQ15_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01400 NZ_CP103431.1 Protein Homology CDS 251142 251735 . + 0 ID=cds-WP_005771472.1;Parent=gene-NYQ15_RS01400;Dbxref=GenBank:WP_005771472.1;Name=WP_005771472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819322.1;locus_tag=NYQ15_RS01400;product=MarC family protein;protein_id=WP_005771472.1;transl_table=11 NZ_CP103431.1 RefSeq gene 251759 252586 . - . ID=gene-NYQ15_RS01405;Name=NYQ15_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01405 NZ_CP103431.1 Protein Homology CDS 251759 252586 . - 0 ID=cds-WP_005771471.1;Parent=gene-NYQ15_RS01405;Dbxref=GenBank:WP_005771471.1;Name=WP_005771471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819323.1;locus_tag=NYQ15_RS01405;product=dimethylarginine dimethylaminohydrolase family protein;protein_id=WP_005771471.1;transl_table=11 NZ_CP103431.1 RefSeq gene 252648 253766 . + . ID=gene-NYQ15_RS01410;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=NYQ15_RS01410 NZ_CP103431.1 Protein Homology CDS 252648 253766 . + 0 ID=cds-WP_010957477.1;Parent=gene-NYQ15_RS01410;Dbxref=GenBank:WP_010957477.1;Name=WP_010957477.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819324.2;locus_tag=NYQ15_RS01410;product=DNA polymerase IV;protein_id=WP_010957477.1;transl_table=11 NZ_CP103431.1 RefSeq gene 253837 254378 . + . ID=gene-NYQ15_RS01415;Name=NYQ15_RS01415;end_range=254378,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01415;partial=true NZ_CP103431.1 Protein Homology CDS 253837 254378 . + 0 ID=cds-WP_259431020.1;Parent=gene-NYQ15_RS01415;Dbxref=GenBank:WP_259431020.1;Name=WP_259431020.1;Ontology_term=GO:0004096,GO:0020037;end_range=254378,.;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771469.1;locus_tag=NYQ15_RS01415;partial=true;product=catalase;protein_id=WP_259431020.1;transl_table=11 NZ_CP103431.1 RefSeq gene 255031 255264 . + . ID=gene-NYQ15_RS01420;Name=NYQ15_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01420 NZ_CP103431.1 Protein Homology CDS 255031 255264 . + 0 ID=cds-WP_012570659.1;Parent=gene-NYQ15_RS01420;Dbxref=GenBank:WP_012570659.1;Name=WP_012570659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570659.1;locus_tag=NYQ15_RS01420;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_012570659.1;transl_table=11 NZ_CP103431.1 RefSeq gene 255268 255588 . + . ID=gene-NYQ15_RS01425;Name=NYQ15_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01425 NZ_CP103431.1 Protein Homology CDS 255268 255588 . + 0 ID=cds-WP_005771458.1;Parent=gene-NYQ15_RS01425;Dbxref=GenBank:WP_005771458.1;Name=WP_005771458.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819329.1;locus_tag=NYQ15_RS01425;product=helix-turn-helix transcriptional regulator;protein_id=WP_005771458.1;transl_table=11 NZ_CP103431.1 RefSeq gene 255675 255750 . - . ID=gene-NYQ15_RS01430;Name=NYQ15_RS01430;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS01430 NZ_CP103431.1 tRNAscan-SE tRNA 255675 255750 . - . ID=rna-NYQ15_RS01430;Parent=gene-NYQ15_RS01430;anticodon=(pos:complement(255714..255716));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS01430;product=tRNA-Glu NZ_CP103431.1 tRNAscan-SE exon 255675 255750 . - . ID=exon-NYQ15_RS01430-1;Parent=rna-NYQ15_RS01430;anticodon=(pos:complement(255714..255716));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS01430;product=tRNA-Glu NZ_CP103431.1 RefSeq gene 255820 257139 . + . ID=gene-NYQ15_RS01435;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=NYQ15_RS01435 NZ_CP103431.1 Protein Homology CDS 255820 257139 . + 0 ID=cds-WP_005771456.1;Parent=gene-NYQ15_RS01435;Dbxref=GenBank:WP_005771456.1;Name=WP_005771456.1;Ontology_term=GO:0043633,GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;go_process=polyadenylation-dependent RNA catabolic process|0043633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819330.1;locus_tag=NYQ15_RS01435;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_005771456.1;transl_table=11 NZ_CP103431.1 RefSeq gene 257136 257696 . + . ID=gene-NYQ15_RS01440;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=NYQ15_RS01440 NZ_CP103431.1 Protein Homology CDS 257136 257696 . + 0 ID=cds-WP_005771454.1;Parent=gene-NYQ15_RS01440;Dbxref=GenBank:WP_005771454.1;Name=WP_005771454.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819331.1;locus_tag=NYQ15_RS01440;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_005771454.1;transl_table=11 NZ_CP103431.1 RefSeq gene 257693 258172 . + . ID=gene-NYQ15_RS01445;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=NYQ15_RS01445 NZ_CP103431.1 Protein Homology CDS 257693 258172 . + 0 ID=cds-WP_005771452.1;Parent=gene-NYQ15_RS01445;Dbxref=GenBank:WP_005771452.1;Name=WP_005771452.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819332.1;locus_tag=NYQ15_RS01445;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_005771452.1;transl_table=11 NZ_CP103431.1 RefSeq gene 258187 258432 . + . ID=gene-NYQ15_RS01450;Name=NYQ15_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01450 NZ_CP103431.1 Protein Homology CDS 258187 258432 . + 0 ID=cds-WP_005771450.1;Parent=gene-NYQ15_RS01450;Dbxref=GenBank:WP_005771450.1;Name=WP_005771450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819333.1;locus_tag=NYQ15_RS01450;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_005771450.1;transl_table=11 NZ_CP103431.1 RefSeq gene 258446 258658 . - . ID=gene-NYQ15_RS01455;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=NYQ15_RS01455 NZ_CP103431.1 Protein Homology CDS 258446 258658 . - 0 ID=cds-WP_005771448.1;Parent=gene-NYQ15_RS01455;Dbxref=GenBank:WP_005771448.1;Name=WP_005771448.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819334.1;locus_tag=NYQ15_RS01455;product=50S ribosomal protein L33;protein_id=WP_005771448.1;transl_table=11 NZ_CP103431.1 RefSeq gene 258669 258908 . - . ID=gene-NYQ15_RS01460;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=NYQ15_RS01460 NZ_CP103431.1 Protein Homology CDS 258669 258908 . - 0 ID=cds-WP_005771445.1;Parent=gene-NYQ15_RS01460;Dbxref=GenBank:WP_005771445.1;Name=WP_005771445.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819335.1;locus_tag=NYQ15_RS01460;product=50S ribosomal protein L28;protein_id=WP_005771445.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 259002 259662 . - . ID=gene-NYQ15_RS01465;Name=radC;gbkey=Gene;gene=radC;gene_biotype=pseudogene;locus_tag=NYQ15_RS01465;pseudo=true NZ_CP103431.1 Protein Homology CDS 259002 259662 . - 0 ID=cds-NYQ15_RS01465;Parent=gene-NYQ15_RS01465;Note=frameshifted;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771440.1;locus_tag=NYQ15_RS01465;product=RadC family protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 259687 259795 . - . ID=gene-NYQ15_RS01470;Name=NYQ15_RS01470;end_range=259795,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS01470;partial=true;pseudo=true NZ_CP103431.1 Protein Homology CDS 259687 259795 . - 0 ID=cds-NYQ15_RS01470;Parent=gene-NYQ15_RS01470;Note=frameshifted%3B incomplete%3B missing N-terminus;end_range=259795,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332956.1;locus_tag=NYQ15_RS01470;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 259870 260045 . - . ID=gene-NYQ15_RS01475;Name=NYQ15_RS01475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS01475;partial=true;pseudo=true;start_range=.,259870 NZ_CP103431.1 Protein Homology CDS 259870 260045 . - 0 ID=cds-NYQ15_RS01475;Parent=gene-NYQ15_RS01475;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332956.1;locus_tag=NYQ15_RS01475;partial=true;product=hypothetical protein;pseudo=true;start_range=.,259870;transl_table=11 NZ_CP103431.1 RefSeq gene 260059 260544 . + . ID=gene-NYQ15_RS01480;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=NYQ15_RS01480 NZ_CP103431.1 Protein Homology CDS 260059 260544 . + 0 ID=cds-WP_010957483.1;Parent=gene-NYQ15_RS01480;Dbxref=GenBank:WP_010957483.1;Name=WP_010957483.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819336.2;locus_tag=NYQ15_RS01480;product=dUTP diphosphatase;protein_id=WP_010957483.1;transl_table=11 NZ_CP103431.1 RefSeq gene 260522 261937 . + . ID=gene-NYQ15_RS01485;Name=NYQ15_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01485 NZ_CP103431.1 Protein Homology CDS 260522 261937 . + 0 ID=cds-WP_259431021.1;Parent=gene-NYQ15_RS01485;Dbxref=GenBank:WP_259431021.1;Name=WP_259431021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819337.2;locus_tag=NYQ15_RS01485;product=phosphomannomutase/phosphoglucomutase;protein_id=WP_259431021.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 261934 263402 . - . ID=gene-NYQ15_RS01490;Name=NYQ15_RS01490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS01490;pseudo=true NZ_CP103431.1 Protein Homology CDS 261934 263402 . - 0 ID=cds-NYQ15_RS01490;Parent=gene-NYQ15_RS01490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819338.1;locus_tag=NYQ15_RS01490;product=CBU_0295 family Dot/Icm type IV secretion system effector;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 263399 264046 . - . ID=gene-NYQ15_RS01495;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=NYQ15_RS01495 NZ_CP103431.1 Protein Homology CDS 263399 264046 . - 0 ID=cds-WP_010957485.1;Parent=gene-NYQ15_RS01495;Dbxref=GenBank:WP_010957485.1;Name=WP_010957485.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819339.2;locus_tag=NYQ15_RS01495;product=orotate phosphoribosyltransferase;protein_id=WP_010957485.1;transl_table=11 NZ_CP103431.1 RefSeq gene 264074 264853 . + . ID=gene-NYQ15_RS01500;Name=NYQ15_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01500 NZ_CP103431.1 Protein Homology CDS 264074 264853 . + 0 ID=cds-WP_259431022.1;Parent=gene-NYQ15_RS01500;Dbxref=GenBank:WP_259431022.1;Name=WP_259431022.1;Ontology_term=GO:0006281,GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819340.1;locus_tag=NYQ15_RS01500;product=exodeoxyribonuclease III;protein_id=WP_259431022.1;transl_table=11 NZ_CP103431.1 RefSeq gene 265109 265951 . - . ID=gene-NYQ15_RS01505;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=NYQ15_RS01505 NZ_CP103431.1 Protein Homology CDS 265109 265951 . - 0 ID=cds-WP_005771421.1;Parent=gene-NYQ15_RS01505;Dbxref=GenBank:WP_005771421.1;Name=WP_005771421.1;Ontology_term=GO:0009252,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819341.1;locus_tag=NYQ15_RS01505;product=glutamate racemase;protein_id=WP_005771421.1;transl_table=11 NZ_CP103431.1 RefSeq gene 265951 266664 . - . ID=gene-NYQ15_RS01510;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=NYQ15_RS01510 NZ_CP103431.1 Protein Homology CDS 265951 266664 . - 0 ID=cds-WP_005771419.1;Parent=gene-NYQ15_RS01510;Dbxref=GenBank:WP_005771419.1;Name=WP_005771419.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819342.3;locus_tag=NYQ15_RS01510;product=ribonuclease PH;protein_id=WP_005771419.1;transl_table=11 NZ_CP103431.1 RefSeq gene 266808 267671 . + . ID=gene-NYQ15_RS01515;Name=NYQ15_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01515 NZ_CP103431.1 Protein Homology CDS 266808 267671 . + 0 ID=cds-WP_005771417.1;Parent=gene-NYQ15_RS01515;Dbxref=GenBank:WP_005771417.1;Name=WP_005771417.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819343.1;locus_tag=NYQ15_RS01515;product=YicC/YloC family endoribonuclease;protein_id=WP_005771417.1;transl_table=11 NZ_CP103431.1 RefSeq gene 267664 268284 . + . ID=gene-NYQ15_RS01520;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=NYQ15_RS01520 NZ_CP103431.1 Protein Homology CDS 267664 268284 . + 0 ID=cds-WP_005771415.1;Parent=gene-NYQ15_RS01520;Dbxref=GenBank:WP_005771415.1;Name=WP_005771415.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819344.1;locus_tag=NYQ15_RS01520;product=guanylate kinase;protein_id=WP_005771415.1;transl_table=11 NZ_CP103431.1 RefSeq gene 268362 268655 . + . ID=gene-NYQ15_RS01525;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=NYQ15_RS01525 NZ_CP103431.1 Protein Homology CDS 268362 268655 . + 0 ID=cds-WP_005771414.1;Parent=gene-NYQ15_RS01525;Dbxref=GenBank:WP_005771414.1;Name=WP_005771414.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819345.1;locus_tag=NYQ15_RS01525;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_005771414.1;transl_table=11 NZ_CP103431.1 RefSeq gene 268709 270832 . + . ID=gene-NYQ15_RS01530;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=NYQ15_RS01530 NZ_CP103431.1 Protein Homology CDS 268709 270832 . + 0 ID=cds-WP_005772738.1;Parent=gene-NYQ15_RS01530;Dbxref=GenBank:WP_005772738.1;Name=WP_005772738.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819346.1;locus_tag=NYQ15_RS01530;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_005772738.1;transl_table=11 NZ_CP103431.1 RefSeq gene 270923 271306 . + . ID=gene-NYQ15_RS01535;Name=NYQ15_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01535 NZ_CP103431.1 Protein Homology CDS 270923 271306 . + 0 ID=cds-WP_005771412.1;Parent=gene-NYQ15_RS01535;Dbxref=GenBank:WP_005771412.1;Name=WP_005771412.1;Ontology_term=GO:0008152,GO:0019239;gbkey=CDS;go_function=deaminase activity|0019239||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771412.1;locus_tag=NYQ15_RS01535;product=Rid family detoxifying hydrolase;protein_id=WP_005771412.1;transl_table=11 NZ_CP103431.1 RefSeq gene 271313 273427 . + . ID=gene-NYQ15_RS01540;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=NYQ15_RS01540 NZ_CP103431.1 Protein Homology CDS 271313 273427 . + 0 ID=cds-WP_098953198.1;Parent=gene-NYQ15_RS01540;Dbxref=GenBank:WP_098953198.1;Name=WP_098953198.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819348.1;locus_tag=NYQ15_RS01540;product=ATP-dependent DNA helicase RecG;protein_id=WP_098953198.1;transl_table=11 NZ_CP103431.1 RefSeq gene 273708 273827 . + . ID=gene-NYQ15_RS01545;Name=NYQ15_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01545 NZ_CP103431.1 Protein Homology CDS 273708 273827 . + 0 ID=cds-WP_005771409.1;Parent=gene-NYQ15_RS01545;Dbxref=GenBank:WP_005771409.1;Name=WP_005771409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819349.1;locus_tag=NYQ15_RS01545;product=hypothetical protein;protein_id=WP_005771409.1;transl_table=11 NZ_CP103431.1 RefSeq gene 273827 274522 . + . ID=gene-NYQ15_RS01550;Name=NYQ15_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01550 NZ_CP103431.1 Protein Homology CDS 273827 274522 . + 0 ID=cds-WP_005771408.1;Parent=gene-NYQ15_RS01550;Dbxref=GenBank:WP_005771408.1;Name=WP_005771408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819350.1;locus_tag=NYQ15_RS01550;product=outer membrane beta-barrel protein;protein_id=WP_005771408.1;transl_table=11 NZ_CP103431.1 RefSeq gene 274906 276807 . + . ID=gene-NYQ15_RS01555;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=NYQ15_RS01555 NZ_CP103431.1 Protein Homology CDS 274906 276807 . + 0 ID=cds-WP_026051156.1;Parent=gene-NYQ15_RS01555;Dbxref=GenBank:WP_026051156.1;Name=WP_026051156.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997264.1;locus_tag=NYQ15_RS01555;product=molecular chaperone HtpG;protein_id=WP_026051156.1;transl_table=11 NZ_CP103431.1 RefSeq gene 277069 277827 . + . ID=gene-NYQ15_RS01560;Name=NYQ15_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01560 NZ_CP103431.1 Protein Homology CDS 277069 277827 . + 0 ID=cds-WP_259431023.1;Parent=gene-NYQ15_RS01560;Dbxref=GenBank:WP_259431023.1;Name=WP_259431023.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819354.2;locus_tag=NYQ15_RS01560;product=outer membrane protein;protein_id=WP_259431023.1;transl_table=11 NZ_CP103431.1 RefSeq gene 277986 278837 . - . ID=gene-NYQ15_RS01565;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=NYQ15_RS01565 NZ_CP103431.1 Protein Homology CDS 277986 278837 . - 0 ID=cds-WP_005769247.1;Parent=gene-NYQ15_RS01565;Dbxref=GenBank:WP_005769247.1;Name=WP_005769247.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819355.1;locus_tag=NYQ15_RS01565;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_005769247.1;transl_table=11 NZ_CP103431.1 RefSeq gene 279543 281042 . - . ID=gene-NYQ15_RS01575;Name=NYQ15_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01575 NZ_CP103431.1 Protein Homology CDS 279543 281042 . - 0 ID=cds-WP_011997261.1;Parent=gene-NYQ15_RS01575;Dbxref=GenBank:WP_011997261.1;Name=WP_011997261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819356.2;locus_tag=NYQ15_RS01575;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_011997261.1;transl_table=11 NZ_CP103431.1 RefSeq gene 281179 281952 . - . ID=gene-NYQ15_RS01580;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=NYQ15_RS01580 NZ_CP103431.1 Protein Homology CDS 281179 281952 . - 0 ID=cds-WP_005769241.1;Parent=gene-NYQ15_RS01580;Dbxref=GenBank:WP_005769241.1;Name=WP_005769241.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819357.1;locus_tag=NYQ15_RS01580;product=hydroxyacylglutathione hydrolase;protein_id=WP_005769241.1;transl_table=11 NZ_CP103431.1 RefSeq gene 282017 282748 . + . ID=gene-NYQ15_RS01585;Name=NYQ15_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01585 NZ_CP103431.1 Protein Homology CDS 282017 282748 . + 0 ID=cds-WP_005772769.1;Parent=gene-NYQ15_RS01585;Dbxref=GenBank:WP_005772769.1;Name=WP_005772769.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819358.1;locus_tag=NYQ15_RS01585;product=class I SAM-dependent methyltransferase;protein_id=WP_005772769.1;transl_table=11 NZ_CP103431.1 RefSeq gene 282763 283227 . + . ID=gene-NYQ15_RS01590;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=NYQ15_RS01590 NZ_CP103431.1 Protein Homology CDS 282763 283227 . + 0 ID=cds-WP_005769237.1;Parent=gene-NYQ15_RS01590;Dbxref=GenBank:WP_005769237.1;Name=WP_005769237.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819359.1;locus_tag=NYQ15_RS01590;product=ribonuclease HI;protein_id=WP_005769237.1;transl_table=11 NZ_CP103431.1 RefSeq gene 283645 284355 . + . ID=gene-NYQ15_RS01595;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=NYQ15_RS01595 NZ_CP103431.1 Protein Homology CDS 283645 284355 . + 0 ID=cds-WP_010957503.1;Parent=gene-NYQ15_RS01595;Dbxref=GenBank:WP_010957503.1;Name=WP_010957503.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819360.2;locus_tag=NYQ15_RS01595;product=DNA polymerase III subunit epsilon;protein_id=WP_010957503.1;transl_table=11 NZ_CP103431.1 RefSeq gene 284349 284993 . - . ID=gene-NYQ15_RS01600;Name=NYQ15_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01600 NZ_CP103431.1 Protein Homology CDS 284349 284993 . - 0 ID=cds-WP_005772772.1;Parent=gene-NYQ15_RS01600;Dbxref=GenBank:WP_005772772.1;Name=WP_005772772.1;Ontology_term=GO:0042834,GO:0071972;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819361.1;locus_tag=NYQ15_RS01600;product=L%2CD-transpeptidase;protein_id=WP_005772772.1;transl_table=11 NZ_CP103431.1 RefSeq gene 284984 285100 . + . ID=gene-NYQ15_RS01605;Name=NYQ15_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01605 NZ_CP103431.1 Protein Homology CDS 284984 285100 . + 0 ID=cds-WP_005769229.1;Parent=gene-NYQ15_RS01605;Dbxref=GenBank:WP_005769229.1;Name=WP_005769229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819362.1;locus_tag=NYQ15_RS01605;product=hypothetical protein;protein_id=WP_005769229.1;transl_table=11 NZ_CP103431.1 RefSeq gene 285097 286974 . - . ID=gene-NYQ15_RS01610;Name=NYQ15_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01610 NZ_CP103431.1 Protein Homology CDS 285097 286974 . - 0 ID=cds-WP_032074837.1;Parent=gene-NYQ15_RS01610;Dbxref=GenBank:WP_032074837.1;Name=WP_032074837.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018470.5;locus_tag=NYQ15_RS01610;product=ImcF-related family protein;protein_id=WP_032074837.1;transl_table=11 NZ_CP103431.1 RefSeq gene 286984 288105 . - . ID=gene-NYQ15_RS01615;Name=NYQ15_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01615 NZ_CP103431.1 Protein Homology CDS 286984 288105 . - 0 ID=cds-WP_032074838.1;Parent=gene-NYQ15_RS01615;Dbxref=GenBank:WP_032074838.1;Name=WP_032074838.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025689.5;locus_tag=NYQ15_RS01615;product=type VI secretion protein IcmF/TssM N-terminal domain-containing protein;protein_id=WP_032074838.1;transl_table=11 NZ_CP103431.1 RefSeq gene 288102 288875 . - . ID=gene-NYQ15_RS01620;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=NYQ15_RS01620 NZ_CP103431.1 Protein Homology CDS 288102 288875 . - 0 ID=cds-WP_005769227.1;Parent=gene-NYQ15_RS01620;Dbxref=GenBank:WP_005769227.1;Name=WP_005769227.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819363.1;locus_tag=NYQ15_RS01620;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_005769227.1;transl_table=11 NZ_CP103431.1 RefSeq gene 289069 289941 . + . ID=gene-NYQ15_RS01625;Name=NYQ15_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01625 NZ_CP103431.1 Protein Homology CDS 289069 289941 . + 0 ID=cds-WP_005769224.1;Parent=gene-NYQ15_RS01625;Dbxref=GenBank:WP_005769224.1;Name=WP_005769224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819364.1;locus_tag=NYQ15_RS01625;product=metal-dependent hydrolase;protein_id=WP_005769224.1;transl_table=11 NZ_CP103431.1 RefSeq gene 289938 290189 . + . ID=gene-NYQ15_RS01630;Name=NYQ15_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01630 NZ_CP103431.1 Protein Homology CDS 289938 290189 . + 0 ID=cds-WP_005769222.1;Parent=gene-NYQ15_RS01630;Dbxref=GenBank:WP_005769222.1;Name=WP_005769222.1;Ontology_term=GO:0006633,GO:0000036;gbkey=CDS;go_function=acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819365.1;locus_tag=NYQ15_RS01630;product=acyl carrier protein;protein_id=WP_005769222.1;transl_table=11 NZ_CP103431.1 RefSeq gene 290203 291849 . + . ID=gene-NYQ15_RS01635;Name=NYQ15_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01635 NZ_CP103431.1 Protein Homology CDS 290203 291849 . + 0 ID=cds-WP_012570666.1;Parent=gene-NYQ15_RS01635;Dbxref=GenBank:WP_012570666.1;Name=WP_012570666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819366.2;locus_tag=NYQ15_RS01635;product=fatty acyl-AMP ligase;protein_id=WP_012570666.1;transl_table=11 NZ_CP103431.1 RefSeq gene 292111 293385 . - . ID=gene-NYQ15_RS01640;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=NYQ15_RS01640 NZ_CP103431.1 Protein Homology CDS 292111 293385 . - 0 ID=cds-WP_005772775.1;Parent=gene-NYQ15_RS01640;Dbxref=GenBank:WP_005772775.1;Name=WP_005772775.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819368.3;locus_tag=NYQ15_RS01640;product=phosphoribosylamine--glycine ligase;protein_id=WP_005772775.1;transl_table=11 NZ_CP103431.1 RefSeq gene 293520 295574 . + . ID=gene-NYQ15_RS01645;Name=NYQ15_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01645 NZ_CP103431.1 GeneMarkS-2+ CDS 293520 295574 . + 0 ID=cds-WP_259431024.1;Parent=gene-NYQ15_RS01645;Dbxref=GenBank:WP_259431024.1;Name=WP_259431024.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS01645;product=hypothetical protein;protein_id=WP_259431024.1;transl_table=11 NZ_CP103431.1 RefSeq gene 295580 296632 . + . ID=gene-NYQ15_RS01650;Name=NYQ15_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01650 NZ_CP103431.1 Protein Homology CDS 295580 296632 . + 0 ID=cds-WP_259431025.1;Parent=gene-NYQ15_RS01650;Dbxref=GenBank:WP_259431025.1;Name=WP_259431025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017252883.1;locus_tag=NYQ15_RS01650;product=hypothetical protein;protein_id=WP_259431025.1;transl_table=11 NZ_CP103431.1 cmsearch riboswitch 296649 296756 . + . ID=id-NZ_CP103431.1:296649..296756;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CP103431.1 RefSeq gene 296783 298393 . + . ID=gene-NYQ15_RS01655;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=NYQ15_RS01655 NZ_CP103431.1 Protein Homology CDS 296783 298393 . + 0 ID=cds-WP_043880707.1;Parent=gene-NYQ15_RS01655;Dbxref=GenBank:WP_043880707.1;Name=WP_043880707.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819372.3;locus_tag=NYQ15_RS01655;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_043880707.1;transl_table=11 NZ_CP103431.1 RefSeq gene 298393 299415 . + . ID=gene-NYQ15_RS01660;Name=thiO;gbkey=Gene;gene=thiO;gene_biotype=protein_coding;locus_tag=NYQ15_RS01660 NZ_CP103431.1 Protein Homology CDS 298393 299415 . + 0 ID=cds-WP_005769211.1;Parent=gene-NYQ15_RS01660;Dbxref=GenBank:WP_005769211.1;Name=WP_005769211.1;Ontology_term=GO:0016647,GO:0050660;gbkey=CDS;gene=thiO;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors%2C oxygen as acceptor|0016647||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819373.2;locus_tag=NYQ15_RS01660;product=glycine oxidase ThiO;protein_id=WP_005769211.1;transl_table=11 NZ_CP103431.1 RefSeq gene 299412 299615 . + . ID=gene-NYQ15_RS01665;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=NYQ15_RS01665 NZ_CP103431.1 Protein Homology CDS 299412 299615 . + 0 ID=cds-WP_005769210.1;Parent=gene-NYQ15_RS01665;Dbxref=GenBank:WP_005769210.1;Name=WP_005769210.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819374.1;locus_tag=NYQ15_RS01665;product=sulfur carrier protein ThiS;protein_id=WP_005769210.1;transl_table=11 NZ_CP103431.1 RefSeq gene 299617 300396 . + . ID=gene-NYQ15_RS01670;Name=NYQ15_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01670 NZ_CP103431.1 Protein Homology CDS 299617 300396 . + 0 ID=cds-WP_005769203.1;Parent=gene-NYQ15_RS01670;Dbxref=GenBank:WP_005769203.1;Name=WP_005769203.1;Ontology_term=GO:1990107;gbkey=CDS;go_function=thiazole synthase activity|1990107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819375.1;locus_tag=NYQ15_RS01670;product=thiazole synthase;protein_id=WP_005769203.1;transl_table=11 NZ_CP103431.1 RefSeq gene 300393 301832 . + . ID=gene-NYQ15_RS01675;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=NYQ15_RS01675 NZ_CP103431.1 Protein Homology CDS 300393 301832 . + 0 ID=cds-WP_005769201.1;Parent=gene-NYQ15_RS01675;Dbxref=GenBank:WP_005769201.1;Name=WP_005769201.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819376.1;locus_tag=NYQ15_RS01675;product=thiamine phosphate synthase;protein_id=WP_005769201.1;transl_table=11 NZ_CP103431.1 RefSeq gene 301910 302584 . + . ID=gene-NYQ15_RS01680;Name=NYQ15_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01680 NZ_CP103431.1 Protein Homology CDS 301910 302584 . + 0 ID=cds-WP_259431026.1;Parent=gene-NYQ15_RS01680;Dbxref=GenBank:WP_259431026.1;Name=WP_259431026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570375.1;locus_tag=NYQ15_RS01680;product=HAD family acid phosphatase;protein_id=WP_259431026.1;transl_table=11 NZ_CP103431.1 RefSeq gene 302601 304184 . - . ID=gene-NYQ15_RS01685;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=NYQ15_RS01685 NZ_CP103431.1 Protein Homology CDS 302601 304184 . - 0 ID=cds-WP_012570668.1;Parent=gene-NYQ15_RS01685;Dbxref=GenBank:WP_012570668.1;Name=WP_012570668.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819378.2;locus_tag=NYQ15_RS01685;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_012570668.1;transl_table=11 NZ_CP103431.1 RefSeq gene 304165 304476 . - . ID=gene-NYQ15_RS01690;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=NYQ15_RS01690 NZ_CP103431.1 Protein Homology CDS 304165 304476 . - 0 ID=cds-WP_010957513.1;Parent=gene-NYQ15_RS01690;Dbxref=GenBank:WP_010957513.1;Name=WP_010957513.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819379.1;locus_tag=NYQ15_RS01690;product=DNA-binding transcriptional regulator Fis;protein_id=WP_010957513.1;transl_table=11 NZ_CP103431.1 RefSeq gene 304709 307345 . + . ID=gene-NYQ15_RS01695;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=NYQ15_RS01695 NZ_CP103431.1 Protein Homology CDS 304709 307345 . + 0 ID=cds-WP_172435534.1;Parent=gene-NYQ15_RS01695;Dbxref=GenBank:WP_172435534.1;Name=WP_172435534.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220172.1;locus_tag=NYQ15_RS01695;product=aminopeptidase N;protein_id=WP_172435534.1;transl_table=11 NZ_CP103431.1 RefSeq gene 307367 308131 . - . ID=gene-NYQ15_RS01700;Name=NYQ15_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01700 NZ_CP103431.1 Protein Homology CDS 307367 308131 . - 0 ID=cds-WP_005769191.1;Parent=gene-NYQ15_RS01700;Dbxref=GenBank:WP_005769191.1;Name=WP_005769191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819381.1;locus_tag=NYQ15_RS01700;product=hypothetical protein;protein_id=WP_005769191.1;transl_table=11 NZ_CP103431.1 RefSeq gene 308362 309300 . + . ID=gene-NYQ15_RS01705;Name=NYQ15_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01705 NZ_CP103431.1 Protein Homology CDS 308362 309300 . + 0 ID=cds-WP_005772405.1;Parent=gene-NYQ15_RS01705;Dbxref=GenBank:WP_005772405.1;Name=WP_005772405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819382.1;locus_tag=NYQ15_RS01705;product=DUF4351 domain-containing protein;protein_id=WP_005772405.1;transl_table=11 NZ_CP103431.1 RefSeq gene 309342 310340 . - . ID=gene-NYQ15_RS01710;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=NYQ15_RS01710 NZ_CP103431.1 Protein Homology CDS 309342 310340 . - 0 ID=cds-WP_005769189.1;Parent=gene-NYQ15_RS01710;Dbxref=GenBank:WP_005769189.1;Name=WP_005769189.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819383.2;locus_tag=NYQ15_RS01710;product=6-phosphofructokinase;protein_id=WP_005769189.1;transl_table=11 NZ_CP103431.1 RefSeq gene 310324 310440 . + . ID=gene-NYQ15_RS01715;Name=NYQ15_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01715 NZ_CP103431.1 Protein Homology CDS 310324 310440 . + 0 ID=cds-WP_010957517.1;Parent=gene-NYQ15_RS01715;Dbxref=GenBank:WP_010957517.1;Name=WP_010957517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819384.1;locus_tag=NYQ15_RS01715;product=hypothetical protein;protein_id=WP_010957517.1;transl_table=11 NZ_CP103431.1 RefSeq gene 310776 311657 . + . ID=gene-NYQ15_RS01720;Name=NYQ15_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01720 NZ_CP103431.1 Protein Homology CDS 310776 311657 . + 0 ID=cds-WP_259425690.1;Parent=gene-NYQ15_RS01720;Dbxref=GenBank:WP_259425690.1;Name=WP_259425690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819385.1;locus_tag=NYQ15_RS01720;product=hypothetical protein;protein_id=WP_259425690.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 311626 312286 . + . ID=gene-NYQ15_RS01725;Name=NYQ15_RS01725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS01725;partial=true;pseudo=true;start_range=.,311626 NZ_CP103431.1 Protein Homology CDS 311626 312286 . + 0 ID=cds-NYQ15_RS01725;Parent=gene-NYQ15_RS01725;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997246.1;locus_tag=NYQ15_RS01725;partial=true;product=CBUD_1734 family Dot/Icm T4SS effector;pseudo=true;start_range=.,311626;transl_table=11 NZ_CP103431.1 RefSeq gene 312287 313588 . - . ID=gene-NYQ15_RS01730;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=NYQ15_RS01730 NZ_CP103431.1 Protein Homology CDS 312287 313588 . - 0 ID=cds-WP_259411741.1;Parent=gene-NYQ15_RS01730;Dbxref=GenBank:WP_259411741.1;Name=WP_259411741.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570371.1;locus_tag=NYQ15_RS01730;product=xylose isomerase;protein_id=WP_259411741.1;transl_table=11 NZ_CP103431.1 RefSeq gene 313658 315142 . - . ID=gene-NYQ15_RS01735;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=NYQ15_RS01735 NZ_CP103431.1 Protein Homology CDS 313658 315142 . - 0 ID=cds-WP_259431027.1;Parent=gene-NYQ15_RS01735;Dbxref=GenBank:WP_259431027.1;Name=WP_259431027.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819387.1;locus_tag=NYQ15_RS01735;product=xylulokinase;protein_id=WP_259431027.1;transl_table=11 NZ_CP103431.1 RefSeq gene 315147 316538 . - . ID=gene-NYQ15_RS01740;Name=NYQ15_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01740 NZ_CP103431.1 Protein Homology CDS 315147 316538 . - 0 ID=cds-WP_005772424.1;Parent=gene-NYQ15_RS01740;Dbxref=GenBank:WP_005772424.1;Name=WP_005772424.1;Ontology_term=GO:0008643,GO:0051119,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sugar transmembrane transporter activity|0051119||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819388.2;locus_tag=NYQ15_RS01740;product=sugar porter family MFS transporter;protein_id=WP_005772424.1;transl_table=11 NZ_CP103431.1 RefSeq gene 316579 317262 . - . ID=gene-NYQ15_RS01745;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=NYQ15_RS01745 NZ_CP103431.1 Protein Homology CDS 316579 317262 . - 0 ID=cds-WP_010957521.1;Parent=gene-NYQ15_RS01745;Dbxref=GenBank:WP_010957521.1;Name=WP_010957521.1;Note=PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (PF00702).;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819390.1;locus_tag=NYQ15_RS01745;product=phosphoglycolate phosphatase;protein_id=WP_010957521.1;transl_table=11 NZ_CP103431.1 RefSeq gene 317255 317959 . - . ID=gene-NYQ15_RS01750;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=NYQ15_RS01750 NZ_CP103431.1 Protein Homology CDS 317255 317959 . - 0 ID=cds-WP_098953154.1;Parent=gene-NYQ15_RS01750;Dbxref=GenBank:WP_098953154.1;Name=WP_098953154.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol-n 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819391.1;locus_tag=NYQ15_RS01750;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_098953154.1;transl_table=11 NZ_CP103431.1 RefSeq gene 317946 318299 . - . ID=gene-NYQ15_RS01755;Name=NYQ15_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01755 NZ_CP103431.1 Protein Homology CDS 317946 318299 . - 0 ID=cds-WP_005772416.1;Parent=gene-NYQ15_RS01755;Dbxref=GenBank:WP_005772416.1;Name=WP_005772416.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF013767.5;locus_tag=NYQ15_RS01755;product=Hpt domain-containing protein;protein_id=WP_005772416.1;transl_table=11 NZ_CP103431.1 RefSeq gene 318345 319238 . - . ID=gene-NYQ15_RS01760;Name=NYQ15_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01760 NZ_CP103431.1 Protein Homology CDS 318345 319238 . - 0 ID=cds-WP_005769162.1;Parent=gene-NYQ15_RS01760;Dbxref=GenBank:WP_005769162.1;Name=WP_005769162.1;Ontology_term=GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819393.1;locus_tag=NYQ15_RS01760;product=cation diffusion facilitator family transporter;protein_id=WP_005769162.1;transl_table=11 NZ_CP103431.1 RefSeq gene 319375 320391 . - . ID=gene-NYQ15_RS01765;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=NYQ15_RS01765 NZ_CP103431.1 Protein Homology CDS 319375 320391 . - 0 ID=cds-WP_098953153.1;Parent=gene-NYQ15_RS01765;Dbxref=GenBank:WP_098953153.1;Name=WP_098953153.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819394.1;locus_tag=NYQ15_RS01765;product=protease SohB;protein_id=WP_098953153.1;transl_table=11 NZ_CP103431.1 RefSeq gene 320601 322178 . + . ID=gene-NYQ15_RS01770;Name=NYQ15_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01770 NZ_CP103431.1 Protein Homology CDS 320601 322178 . + 0 ID=cds-WP_098953152.1;Parent=gene-NYQ15_RS01770;Dbxref=GenBank:WP_098953152.1;Name=WP_098953152.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819395.2;locus_tag=NYQ15_RS01770;product=APC family permease;protein_id=WP_098953152.1;transl_table=11 NZ_CP103431.1 RefSeq gene 322254 323579 . + . ID=gene-NYQ15_RS01775;Name=NYQ15_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01775 NZ_CP103431.1 Protein Homology CDS 322254 323579 . + 0 ID=cds-WP_005769156.1;Parent=gene-NYQ15_RS01775;Dbxref=GenBank:WP_005769156.1;Name=WP_005769156.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF024206.5;locus_tag=NYQ15_RS01775;product=ankyrin repeat domain-containing F-box protein;protein_id=WP_005769156.1;transl_table=11 NZ_CP103431.1 RefSeq gene 323545 324135 . + . ID=gene-NYQ15_RS01780;Name=NYQ15_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01780 NZ_CP103431.1 Protein Homology CDS 323545 324135 . + 0 ID=cds-WP_238378312.1;Parent=gene-NYQ15_RS01780;Dbxref=GenBank:WP_238378312.1;Name=WP_238378312.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024206.5;locus_tag=NYQ15_RS01780;product=ankyrin repeat domain-containing protein;protein_id=WP_238378312.1;transl_table=11 NZ_CP103431.1 RefSeq gene 324270 324497 . + . ID=gene-NYQ15_RS01790;Name=NYQ15_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01790 NZ_CP103431.1 Protein Homology CDS 324270 324497 . + 0 ID=cds-WP_010957526.1;Parent=gene-NYQ15_RS01790;Dbxref=GenBank:WP_010957526.1;Name=WP_010957526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819398.1;locus_tag=NYQ15_RS01790;product=hypothetical protein;protein_id=WP_010957526.1;transl_table=11 NZ_CP103431.1 RefSeq gene 325814 327106 . - . ID=gene-NYQ15_RS01795;Name=NYQ15_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01795 NZ_CP103431.1 Protein Homology CDS 325814 327106 . - 0 ID=cds-WP_005772413.1;Parent=gene-NYQ15_RS01795;Dbxref=GenBank:WP_005772413.1;Name=WP_005772413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570360.1;locus_tag=NYQ15_RS01795;product=hypothetical protein;protein_id=WP_005772413.1;transl_table=11 NZ_CP103431.1 RefSeq gene 327248 328453 . - . ID=gene-NYQ15_RS01800;Name=NYQ15_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01800 NZ_CP103431.1 Protein Homology CDS 327248 328453 . - 0 ID=cds-WP_005772410.1;Parent=gene-NYQ15_RS01800;Dbxref=GenBank:WP_005772410.1;Name=WP_005772410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819403.1;locus_tag=NYQ15_RS01800;product=M20 family metallopeptidase;protein_id=WP_005772410.1;transl_table=11 NZ_CP103431.1 RefSeq gene 328371 329453 . - . ID=gene-NYQ15_RS01805;Name=NYQ15_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01805 NZ_CP103431.1 Protein Homology CDS 328371 329453 . - 0 ID=cds-WP_005769137.1;Parent=gene-NYQ15_RS01805;Dbxref=GenBank:WP_005769137.1;Name=WP_005769137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769137.1;locus_tag=NYQ15_RS01805;product=U32 family peptidase;protein_id=WP_005769137.1;transl_table=11 NZ_CP103431.1 RefSeq gene 329534 330865 . - . ID=gene-NYQ15_RS01810;Name=NYQ15_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01810 NZ_CP103431.1 Protein Homology CDS 329534 330865 . - 0 ID=cds-WP_011997233.1;Parent=gene-NYQ15_RS01810;Dbxref=GenBank:WP_011997233.1;Name=WP_011997233.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819404.2;locus_tag=NYQ15_RS01810;product=MFS transporter;protein_id=WP_011997233.1;transl_table=11 NZ_CP103431.1 RefSeq gene 331041 331799 . - . ID=gene-NYQ15_RS01815;Name=NYQ15_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01815 NZ_CP103431.1 Protein Homology CDS 331041 331799 . - 0 ID=cds-WP_005769133.1;Parent=gene-NYQ15_RS01815;Dbxref=GenBank:WP_005769133.1;Name=WP_005769133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819406.1;locus_tag=NYQ15_RS01815;product=ATP-binding protein;protein_id=WP_005769133.1;transl_table=11 NZ_CP103431.1 RefSeq gene 331780 332526 . - . ID=gene-NYQ15_RS01820;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=NYQ15_RS01820 NZ_CP103431.1 Protein Homology CDS 331780 332526 . - 0 ID=cds-WP_005769131.1;Parent=gene-NYQ15_RS01820;Dbxref=GenBank:WP_005769131.1;Name=WP_005769131.1;Ontology_term=GO:0000160,GO:0006355,GO:0006817,GO:0000156,GO:0003677;gbkey=CDS;gene=phoB;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819407.1;locus_tag=NYQ15_RS01820;product=phosphate regulon transcriptional regulator PhoB;protein_id=WP_005769131.1;transl_table=11 NZ_CP103431.1 RefSeq gene 332578 333762 . + . ID=gene-NYQ15_RS01825;Name=NYQ15_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01825 NZ_CP103431.1 Protein Homology CDS 332578 333762 . + 0 ID=cds-WP_098953151.1;Parent=gene-NYQ15_RS01825;Dbxref=GenBank:WP_098953151.1;Name=WP_098953151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819408.2;locus_tag=NYQ15_RS01825;product=sorbosone dehydrogenase family protein;protein_id=WP_098953151.1;transl_table=11 NZ_CP103431.1 RefSeq gene 333765 333869 . - . ID=gene-NYQ15_RS01830;Name=NYQ15_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01830 NZ_CP103431.1 Protein Homology CDS 333765 333869 . - 0 ID=cds-WP_010957531.1;Parent=gene-NYQ15_RS01830;Dbxref=GenBank:WP_010957531.1;Name=WP_010957531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819409.1;locus_tag=NYQ15_RS01830;product=hypothetical protein;protein_id=WP_010957531.1;transl_table=11 NZ_CP103431.1 RefSeq gene 333933 334160 . - . ID=gene-NYQ15_RS01835;Name=NYQ15_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01835 NZ_CP103431.1 Protein Homology CDS 333933 334160 . - 0 ID=cds-WP_005772412.1;Parent=gene-NYQ15_RS01835;Dbxref=GenBank:WP_005772412.1;Name=WP_005772412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819410.1;locus_tag=NYQ15_RS01835;product=hypothetical protein;protein_id=WP_005772412.1;transl_table=11 NZ_CP103431.1 RefSeq gene 334232 335425 . - . ID=gene-NYQ15_RS01840;Name=NYQ15_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01840 NZ_CP103431.1 Protein Homology CDS 334232 335425 . - 0 ID=cds-WP_259431028.1;Parent=gene-NYQ15_RS01840;Dbxref=GenBank:WP_259431028.1;Name=WP_259431028.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819411.1;locus_tag=NYQ15_RS01840;product=MFS transporter;protein_id=WP_259431028.1;transl_table=11 NZ_CP103431.1 RefSeq gene 335528 336892 . - . ID=gene-NYQ15_RS01845;Name=NYQ15_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01845 NZ_CP103431.1 Protein Homology CDS 335528 336892 . - 0 ID=cds-WP_005772411.1;Parent=gene-NYQ15_RS01845;Dbxref=GenBank:WP_005772411.1;Name=WP_005772411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819412.1;locus_tag=NYQ15_RS01845;product=CBU_0372 family Dot/Icm type IV secretion system effector;protein_id=WP_005772411.1;transl_table=11 NZ_CP103431.1 RefSeq gene 337039 337563 . - . ID=gene-NYQ15_RS01850;Name=NYQ15_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01850 NZ_CP103431.1 Protein Homology CDS 337039 337563 . - 0 ID=cds-WP_010957534.1;Parent=gene-NYQ15_RS01850;Dbxref=GenBank:WP_010957534.1;Name=WP_010957534.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819413.1;locus_tag=NYQ15_RS01850;product=MaoC family dehydratase;protein_id=WP_010957534.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 337636 338160 . - . ID=gene-NYQ15_RS01855;Name=NYQ15_RS01855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS01855;partial=true;pseudo=true;start_range=.,337636 NZ_CP103431.1 Protein Homology CDS 337636 338160 . - 0 ID=cds-NYQ15_RS01855;Parent=gene-NYQ15_RS01855;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF015297.5;locus_tag=NYQ15_RS01855;partial=true;product=HpcH/HpaI aldolase/citrate lyase family protein;pseudo=true;start_range=.,337636;transl_table=11 NZ_CP103431.1 RefSeq gene 338184 338402 . - . ID=gene-NYQ15_RS01860;Name=NYQ15_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01860 NZ_CP103431.1 Protein Homology CDS 338184 338402 . - 0 ID=cds-WP_250637148.1;Parent=gene-NYQ15_RS01860;Dbxref=GenBank:WP_250637148.1;Name=WP_250637148.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF015297.5;locus_tag=NYQ15_RS01860;product=aldolase/citrate lyase family protein;protein_id=WP_250637148.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 339067 339789 . + . ID=gene-NYQ15_RS01865;Name=NYQ15_RS01865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS01865;pseudo=true NZ_CP103431.1 Protein Homology CDS 339067 339789 . + 0 ID=cds-NYQ15_RS01865;Parent=gene-NYQ15_RS01865;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997226.1;locus_tag=NYQ15_RS01865;product=CBUD_1704 family Dot/Icm T4SS effector;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 340049 340270 . + . ID=gene-NYQ15_RS01870;Name=NYQ15_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01870 NZ_CP103431.1 Protein Homology CDS 340049 340270 . + 0 ID=cds-WP_005772406.1;Parent=gene-NYQ15_RS01870;Dbxref=GenBank:WP_005772406.1;Name=WP_005772406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819416.1;locus_tag=NYQ15_RS01870;product=hypothetical protein;protein_id=WP_005772406.1;transl_table=11 NZ_CP103431.1 RefSeq gene 340427 340849 . + . ID=gene-NYQ15_RS01875;Name=NYQ15_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01875 NZ_CP103431.1 Protein Homology CDS 340427 340849 . + 0 ID=cds-WP_259431029.1;Parent=gene-NYQ15_RS01875;Dbxref=GenBank:WP_259431029.1;Name=WP_259431029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819417.1;locus_tag=NYQ15_RS01875;product=hypothetical protein;protein_id=WP_259431029.1;transl_table=11 NZ_CP103431.1 RefSeq gene 340864 341637 . - . ID=gene-NYQ15_RS01880;Name=NYQ15_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01880 NZ_CP103431.1 Protein Homology CDS 340864 341637 . - 0 ID=cds-WP_005769099.1;Parent=gene-NYQ15_RS01880;Dbxref=GenBank:WP_005769099.1;Name=WP_005769099.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010598185.1;locus_tag=NYQ15_RS01880;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_005769099.1;transl_table=11 NZ_CP103431.1 RefSeq gene 341654 341779 . - . ID=gene-NYQ15_RS01885;Name=NYQ15_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01885 NZ_CP103431.1 Protein Homology CDS 341654 341779 . - 0 ID=cds-WP_005769097.1;Parent=gene-NYQ15_RS01885;Dbxref=GenBank:WP_005769097.1;Name=WP_005769097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819419.1;locus_tag=NYQ15_RS01885;product=hypothetical protein;protein_id=WP_005769097.1;transl_table=11 NZ_CP103431.1 RefSeq gene 341857 342420 . + . ID=gene-NYQ15_RS01890;Name=NYQ15_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01890 NZ_CP103431.1 Protein Homology CDS 341857 342420 . + 0 ID=cds-WP_012570677.1;Parent=gene-NYQ15_RS01890;Dbxref=GenBank:WP_012570677.1;Name=WP_012570677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819420.2;locus_tag=NYQ15_RS01890;product=GrpB family protein;protein_id=WP_012570677.1;transl_table=11 NZ_CP103431.1 RefSeq gene 343079 343152 . - . ID=gene-NYQ15_RS01895;Name=NYQ15_RS01895;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS01895 NZ_CP103431.1 tRNAscan-SE tRNA 343079 343152 . - . ID=rna-NYQ15_RS01895;Parent=gene-NYQ15_RS01895;anticodon=(pos:complement(343116..343118));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS01895;product=tRNA-Pro NZ_CP103431.1 tRNAscan-SE exon 343079 343152 . - . ID=exon-NYQ15_RS01895-1;Parent=rna-NYQ15_RS01895;anticodon=(pos:complement(343116..343118));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS01895;product=tRNA-Pro NZ_CP103431.1 RefSeq gene 343217 344215 . - . ID=gene-NYQ15_RS01900;Name=NYQ15_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01900 NZ_CP103431.1 Protein Homology CDS 343217 344215 . - 0 ID=cds-WP_005772421.1;Parent=gene-NYQ15_RS01900;Dbxref=GenBank:WP_005772421.1;Name=WP_005772421.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819421.1;locus_tag=NYQ15_RS01900;product=polyprenyl synthetase family protein;protein_id=WP_005772421.1;transl_table=11 NZ_CP103431.1 RefSeq gene 344281 344919 . + . ID=gene-NYQ15_RS01905;Name=NYQ15_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01905 NZ_CP103431.1 Protein Homology CDS 344281 344919 . + 0 ID=cds-WP_010957540.1;Parent=gene-NYQ15_RS01905;Dbxref=GenBank:WP_010957540.1;Name=WP_010957540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819422.2;locus_tag=NYQ15_RS01905;product=DNA-3-methyladenine glycosylase I;protein_id=WP_010957540.1;transl_table=11 NZ_CP103431.1 RefSeq gene 346616 346792 . + . ID=gene-NYQ15_RS01910;Name=NYQ15_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01910;partial=true;start_range=.,346616 NZ_CP103431.1 Protein Homology CDS 346616 346792 . + 0 ID=cds-WP_259431104.1;Parent=gene-NYQ15_RS01910;Dbxref=GenBank:WP_259431104.1;Name=WP_259431104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332961.1;locus_tag=NYQ15_RS01910;partial=true;product=hypothetical protein;protein_id=WP_259431104.1;start_range=.,346616;transl_table=11 NZ_CP103431.1 RefSeq gene 346885 347232 . + . ID=gene-NYQ15_RS01915;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=NYQ15_RS01915 NZ_CP103431.1 Protein Homology CDS 346885 347232 . + 0 ID=cds-WP_032075152.1;Parent=gene-NYQ15_RS01915;Dbxref=GenBank:WP_032075152.1;Name=WP_032075152.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220194.1;locus_tag=NYQ15_RS01915;product=50S ribosomal protein L21;protein_id=WP_032075152.1;transl_table=11 NZ_CP103431.1 RefSeq gene 347222 347494 . + . ID=gene-NYQ15_RS01920;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=NYQ15_RS01920 NZ_CP103431.1 Protein Homology CDS 347222 347494 . + 0 ID=cds-WP_005771977.1;Parent=gene-NYQ15_RS01920;Dbxref=GenBank:WP_005771977.1;Name=WP_005771977.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819425.1;locus_tag=NYQ15_RS01920;product=50S ribosomal protein L27;protein_id=WP_005771977.1;transl_table=11 NZ_CP103431.1 RefSeq gene 347659 348678 . + . ID=gene-NYQ15_RS01925;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=NYQ15_RS01925 NZ_CP103431.1 Protein Homology CDS 347659 348678 . + 0 ID=cds-WP_005771976.1;Parent=gene-NYQ15_RS01925;Dbxref=GenBank:WP_005771976.1;Name=WP_005771976.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819426.1;locus_tag=NYQ15_RS01925;product=Obg family GTPase CgtA;protein_id=WP_005771976.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 348778 352952 . + . ID=gene-NYQ15_RS01930;Name=cetCb2;gbkey=Gene;gene=cetCb2;gene_biotype=pseudogene;locus_tag=NYQ15_RS01930;pseudo=true NZ_CP103431.1 Protein Homology CDS 348778 352952 . + 0 ID=cds-NYQ15_RS01930;Parent=gene-NYQ15_RS01930;Note=frameshifted%3B internal stop;gbkey=CDS;gene=cetCb2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819427.1;locus_tag=NYQ15_RS01930;product=Dot/Icm T4SS effector CetCb2;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 352958 353230 . - . ID=gene-NYQ15_RS01935;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=NYQ15_RS01935 NZ_CP103431.1 Protein Homology CDS 352958 353230 . - 0 ID=cds-WP_005771970.1;Parent=gene-NYQ15_RS01935;Dbxref=GenBank:WP_005771970.1;Name=WP_005771970.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819428.1;locus_tag=NYQ15_RS01935;product=30S ribosomal protein S20;protein_id=WP_005771970.1;transl_table=11 NZ_CP103431.1 RefSeq gene 353474 355021 . + . ID=gene-NYQ15_RS01940;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=NYQ15_RS01940 NZ_CP103431.1 Protein Homology CDS 353474 355021 . + 0 ID=cds-WP_259431030.1;Parent=gene-NYQ15_RS01940;Dbxref=GenBank:WP_259431030.1;Name=WP_259431030.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819429.1;locus_tag=NYQ15_RS01940;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_259431030.1;transl_table=11 NZ_CP103431.1 RefSeq gene 355093 356055 . + . ID=gene-NYQ15_RS01945;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=NYQ15_RS01945 NZ_CP103431.1 Protein Homology CDS 355093 356055 . + 0 ID=cds-WP_005771967.1;Parent=gene-NYQ15_RS01945;Dbxref=GenBank:WP_005771967.1;Name=WP_005771967.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771967.1;locus_tag=NYQ15_RS01945;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_005771967.1;transl_table=11 NZ_CP103431.1 RefSeq gene 356098 356406 . - . ID=gene-NYQ15_RS01950;Name=NYQ15_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01950 NZ_CP103431.1 GeneMarkS-2+ CDS 356098 356406 . - 0 ID=cds-WP_230593280.1;Parent=gene-NYQ15_RS01950;Dbxref=GenBank:WP_230593280.1;Name=WP_230593280.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS01950;product=hypothetical protein;protein_id=WP_230593280.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 356570 357388 . - . ID=gene-NYQ15_RS01955;Name=NYQ15_RS01955;end_range=357388,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS01955;partial=true;pseudo=true NZ_CP103431.1 GeneMarkS-2+ CDS 356570 357388 . - 0 ID=cds-NYQ15_RS01955;Parent=gene-NYQ15_RS01955;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=357388,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS01955;partial=true;product=ankyrin repeat domain-containing protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 357660 357932 . - . ID=gene-NYQ15_RS01960;Name=NYQ15_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01960 NZ_CP103431.1 GeneMarkS-2+ CDS 357660 357932 . - 0 ID=cds-WP_032075147.1;Parent=gene-NYQ15_RS01960;Dbxref=GenBank:WP_032075147.1;Name=WP_032075147.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS01960;product=hypothetical protein;protein_id=WP_032075147.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 358239 358924 . + . ID=gene-NYQ15_RS01965;Name=NYQ15_RS01965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS01965;pseudo=true NZ_CP103431.1 Protein Homology CDS 358239 358924 . + 0 ID=cds-NYQ15_RS01965;Parent=gene-NYQ15_RS01965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819434.1;locus_tag=NYQ15_RS01965;product=head GIN domain-containing protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 359037 361847 . + . ID=gene-NYQ15_RS01970;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=NYQ15_RS01970 NZ_CP103431.1 Protein Homology CDS 359037 361847 . + 0 ID=cds-WP_005772462.1;Parent=gene-NYQ15_RS01970;Dbxref=GenBank:WP_005772462.1;Name=WP_005772462.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819435.1;locus_tag=NYQ15_RS01970;product=isoleucine--tRNA ligase;protein_id=WP_005772462.1;transl_table=11 NZ_CP103431.1 RefSeq gene 361850 362347 . + . ID=gene-NYQ15_RS01975;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=NYQ15_RS01975 NZ_CP103431.1 Protein Homology CDS 361850 362347 . + 0 ID=cds-WP_032075146.1;Parent=gene-NYQ15_RS01975;Dbxref=GenBank:WP_032075146.1;Name=WP_032075146.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819436.2;locus_tag=NYQ15_RS01975;product=signal peptidase II;protein_id=WP_032075146.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 362359 362450 . + . ID=gene-NYQ15_RS01980;Name=NYQ15_RS01980;end_range=362450,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS01980;partial=true;pseudo=true NZ_CP103431.1 Protein Homology CDS 362359 362450 . + 0 ID=cds-NYQ15_RS01980;Parent=gene-NYQ15_RS01980;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=362450,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819437.1;locus_tag=NYQ15_RS01980;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 363239 363432 . + . ID=gene-NYQ15_RS01985;Name=NYQ15_RS01985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS01985;partial=true;pseudo=true;start_range=.,363239 NZ_CP103431.1 Protein Homology CDS 363239 363432 . + 2 ID=cds-NYQ15_RS01985;Parent=gene-NYQ15_RS01985;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819439.1;locus_tag=NYQ15_RS01985;partial=true;product=hypothetical protein;pseudo=true;start_range=.,363239;transl_table=11 NZ_CP103431.1 RefSeq gene 363429 363538 . + . ID=gene-NYQ15_RS01990;Name=NYQ15_RS01990;end_range=363538,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01990;partial=true NZ_CP103431.1 Protein Homology CDS 363429 363538 . + 0 ID=cds-WP_259425715.1;Parent=gene-NYQ15_RS01990;Dbxref=GenBank:WP_259425715.1;Name=WP_259425715.1;end_range=363538,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332962.1;locus_tag=NYQ15_RS01990;partial=true;product=hypothetical protein;protein_id=WP_259425715.1;transl_table=11 NZ_CP103431.1 RefSeq gene 363866 365272 . + . ID=gene-NYQ15_RS01995;Name=NYQ15_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS01995 NZ_CP103431.1 Protein Homology CDS 363866 365272 . + 0 ID=cds-WP_005771960.1;Parent=gene-NYQ15_RS01995;Dbxref=GenBank:WP_005771960.1;Name=WP_005771960.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771960.1;locus_tag=NYQ15_RS01995;product=GNAT family N-acetyltransferase;protein_id=WP_005771960.1;transl_table=11 NZ_CP103431.1 RefSeq gene 365427 365528 . - . ID=gene-NYQ15_RS02000;Name=NYQ15_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02000 NZ_CP103431.1 Protein Homology CDS 365427 365528 . - 0 ID=cds-WP_010957556.1;Parent=gene-NYQ15_RS02000;Dbxref=GenBank:WP_010957556.1;Name=WP_010957556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819446.1;locus_tag=NYQ15_RS02000;product=hypothetical protein;protein_id=WP_010957556.1;transl_table=11 NZ_CP103431.1 RefSeq gene 365521 366018 . - . ID=gene-NYQ15_RS02005;Name=NYQ15_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02005 NZ_CP103431.1 Protein Homology CDS 365521 366018 . - 0 ID=cds-WP_012570340.1;Parent=gene-NYQ15_RS02005;Dbxref=GenBank:WP_012570340.1;Name=WP_012570340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570340.1;locus_tag=NYQ15_RS02005;product=hypothetical protein;protein_id=WP_012570340.1;transl_table=11 NZ_CP103431.1 RefSeq gene 366030 366326 . - . ID=gene-NYQ15_RS02010;Name=NYQ15_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02010 NZ_CP103431.1 Protein Homology CDS 366030 366326 . - 0 ID=cds-WP_310795121.1;Parent=gene-NYQ15_RS02010;Dbxref=GenBank:WP_310795121.1;Name=WP_310795121.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.5;locus_tag=NYQ15_RS02010;product=MFS transporter;protein_id=WP_310795121.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 366461 368196 . - . ID=gene-NYQ15_RS02015;Name=coxCC3;gbkey=Gene;gene=coxCC3;gene_biotype=pseudogene;locus_tag=NYQ15_RS02015;pseudo=true NZ_CP103431.1 Protein Homology CDS 366461 368196 . - 0 ID=cds-NYQ15_RS02015;Parent=gene-NYQ15_RS02015;Note=frameshifted;gbkey=CDS;gene=coxCC3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819448.1;locus_tag=NYQ15_RS02015;product=Dot/Icm T4SS effector CoxCC3;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 368388 368483 . + . ID=gene-NYQ15_RS02020;Name=NYQ15_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02020 NZ_CP103431.1 Protein Homology CDS 368388 368483 . + 0 ID=cds-WP_010957559.1;Parent=gene-NYQ15_RS02020;Dbxref=GenBank:WP_010957559.1;Name=WP_010957559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819449.1;locus_tag=NYQ15_RS02020;product=hypothetical protein;protein_id=WP_010957559.1;transl_table=11 NZ_CP103431.1 RefSeq gene 368611 369021 . - . ID=gene-NYQ15_RS02025;Name=NYQ15_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02025 NZ_CP103431.1 Protein Homology CDS 368611 369021 . - 0 ID=cds-WP_005771954.1;Parent=gene-NYQ15_RS02025;Dbxref=GenBank:WP_005771954.1;Name=WP_005771954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819450.1;locus_tag=NYQ15_RS02025;product=type IV pilin protein;protein_id=WP_005771954.1;transl_table=11 NZ_CP103431.1 RefSeq gene 369138 369213 . + . ID=gene-NYQ15_RS02030;Name=NYQ15_RS02030;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS02030 NZ_CP103431.1 tRNAscan-SE tRNA 369138 369213 . + . ID=rna-NYQ15_RS02030;Parent=gene-NYQ15_RS02030;anticodon=(pos:369171..369173);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS02030;product=tRNA-Lys NZ_CP103431.1 tRNAscan-SE exon 369138 369213 . + . ID=exon-NYQ15_RS02030-1;Parent=rna-NYQ15_RS02030;anticodon=(pos:369171..369173);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS02030;product=tRNA-Lys NZ_CP103431.1 RefSeq pseudogene 369380 370544 . + . ID=gene-NYQ15_RS02035;Name=coxH1;gbkey=Gene;gene=coxH1;gene_biotype=pseudogene;locus_tag=NYQ15_RS02035;pseudo=true NZ_CP103431.1 Protein Homology CDS 369380 370544 . + 0 ID=cds-NYQ15_RS02035;Parent=gene-NYQ15_RS02035;Note=frameshifted%3B internal stop;gbkey=CDS;gene=coxH1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570338.1;locus_tag=NYQ15_RS02035;product=Dot/Icm T4SS effector CoxH1;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 370710 371216 . - . ID=gene-NYQ15_RS02040;Name=NYQ15_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02040 NZ_CP103431.1 Protein Homology CDS 370710 371216 . - 0 ID=cds-WP_259423796.1;Parent=gene-NYQ15_RS02040;Dbxref=GenBank:WP_259423796.1;Name=WP_259423796.1;Ontology_term=GO:0008270,GO:0052717;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,tRNA-specific adenosine-34 deaminase activity|0052717||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819453.2;locus_tag=NYQ15_RS02040;product=nucleoside deaminase;protein_id=WP_259423796.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 371770 371847 . + . ID=gene-NYQ15_RS02050;Name=NYQ15_RS02050;end_range=371847,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS02050;partial=true;pseudo=true NZ_CP103431.1 Protein Homology CDS 371770 371847 . + 0 ID=cds-NYQ15_RS02050;Parent=gene-NYQ15_RS02050;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=371847,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819398.1;locus_tag=NYQ15_RS02050;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 371956 372801 . - . ID=gene-NYQ15_RS02055;Name=NYQ15_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02055 NZ_CP103431.1 Protein Homology CDS 371956 372801 . - 0 ID=cds-WP_098953159.1;Parent=gene-NYQ15_RS02055;Dbxref=GenBank:WP_098953159.1;Name=WP_098953159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819456.1;locus_tag=NYQ15_RS02055;product=aminodeoxychorismate lyase;protein_id=WP_098953159.1;transl_table=11 NZ_CP103431.1 RefSeq gene 372904 373734 . - . ID=gene-NYQ15_RS02060;Name=NYQ15_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02060 NZ_CP103431.1 Protein Homology CDS 372904 373734 . - 0 ID=cds-WP_098953158.1;Parent=gene-NYQ15_RS02060;Dbxref=GenBank:WP_098953158.1;Name=WP_098953158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819457.1;locus_tag=NYQ15_RS02060;product=polysaccharide deacetylase family protein;protein_id=WP_098953158.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 373812 375567 . - . ID=gene-NYQ15_RS02070;Name=NYQ15_RS02070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS02070;pseudo=true NZ_CP103431.1 Protein Homology CDS 373812 375567 . - 0 ID=cds-NYQ15_RS02070;Parent=gene-NYQ15_RS02070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018031.5;locus_tag=NYQ15_RS02070;product=IucA/IucC family protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 375574 375909 . - . ID=gene-NYQ15_RS02075;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=NYQ15_RS02075 NZ_CP103431.1 Protein Homology CDS 375574 375909 . - 0 ID=cds-WP_005771942.1;Parent=gene-NYQ15_RS02075;Dbxref=GenBank:WP_005771942.1;Name=WP_005771942.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819460.1;locus_tag=NYQ15_RS02075;product=aspartate 1-decarboxylase;protein_id=WP_005771942.1;transl_table=11 NZ_CP103431.1 RefSeq gene 375903 376676 . - . ID=gene-NYQ15_RS02080;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=NYQ15_RS02080 NZ_CP103431.1 Protein Homology CDS 375903 376676 . - 0 ID=cds-WP_005771941.1;Parent=gene-NYQ15_RS02080;Dbxref=GenBank:WP_005771941.1;Name=WP_005771941.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819461.1;locus_tag=NYQ15_RS02080;product=pantoate--beta-alanine ligase;protein_id=WP_005771941.1;transl_table=11 NZ_CP103431.1 RefSeq gene 376687 377487 . - . ID=gene-NYQ15_RS02085;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=NYQ15_RS02085 NZ_CP103431.1 Protein Homology CDS 376687 377487 . - 0 ID=cds-WP_012570863.1;Parent=gene-NYQ15_RS02085;Dbxref=GenBank:WP_012570863.1;Name=WP_012570863.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819462.1;locus_tag=NYQ15_RS02085;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_012570863.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 377579 378946 . - . ID=gene-NYQ15_RS02090;Name=NYQ15_RS02090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS02090;pseudo=true NZ_CP103431.1 Protein Homology CDS 377579 378946 . - 0 ID=cds-NYQ15_RS02090;Parent=gene-NYQ15_RS02090;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819463.1;locus_tag=NYQ15_RS02090;product=CBU_0425 family Dot/Icm T4SS effector;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 379193 381064 . - . ID=gene-NYQ15_RS02095;Name=NYQ15_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02095 NZ_CP103431.1 Protein Homology CDS 379193 381064 . - 0 ID=cds-WP_259431031.1;Parent=gene-NYQ15_RS02095;Dbxref=GenBank:WP_259431031.1;Name=WP_259431031.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772469.1;locus_tag=NYQ15_RS02095;product=APC family permease;protein_id=WP_259431031.1;transl_table=11 NZ_CP103431.1 RefSeq gene 380979 381161 . + . ID=gene-NYQ15_RS02100;Name=NYQ15_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02100 NZ_CP103431.1 Protein Homology CDS 380979 381161 . + 0 ID=cds-WP_098953156.1;Parent=gene-NYQ15_RS02100;Dbxref=GenBank:WP_098953156.1;Name=WP_098953156.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018630.5;locus_tag=NYQ15_RS02100;product=DUF1289 domain-containing protein;protein_id=WP_098953156.1;transl_table=11 NZ_CP103431.1 RefSeq gene 381194 382310 . + . ID=gene-NYQ15_RS02105;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=NYQ15_RS02105 NZ_CP103431.1 Protein Homology CDS 381194 381268 . + 0 ID=cds-WP_098953155.1;Parent=gene-NYQ15_RS02105;Dbxref=GenBank:WP_098953155.1;Name=WP_098953155.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_143343640.1;locus_tag=NYQ15_RS02105;product=peptide chain release factor 2;protein_id=WP_098953155.1;transl_table=11 NZ_CP103431.1 Protein Homology CDS 381270 382310 . + 0 ID=cds-WP_098953155.1;Parent=gene-NYQ15_RS02105;Dbxref=GenBank:WP_098953155.1;Name=WP_098953155.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_143343640.1;locus_tag=NYQ15_RS02105;product=peptide chain release factor 2;protein_id=WP_098953155.1;transl_table=11 NZ_CP103431.1 RefSeq gene 382294 382689 . + . ID=gene-NYQ15_RS02110;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=NYQ15_RS02110 NZ_CP103431.1 Protein Homology CDS 382294 382689 . + 0 ID=cds-WP_005772466.1;Parent=gene-NYQ15_RS02110;Dbxref=GenBank:WP_005772466.1;Name=WP_005772466.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819466.1;locus_tag=NYQ15_RS02110;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_005772466.1;transl_table=11 NZ_CP103431.1 RefSeq gene 382821 384317 . + . ID=gene-NYQ15_RS02115;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=NYQ15_RS02115 NZ_CP103431.1 Protein Homology CDS 382821 384317 . + 0 ID=cds-WP_005771651.1;Parent=gene-NYQ15_RS02115;Dbxref=GenBank:WP_005771651.1;Name=WP_005771651.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819467.1;locus_tag=NYQ15_RS02115;product=lysine--tRNA ligase;protein_id=WP_005771651.1;transl_table=11 NZ_CP103431.1 RefSeq gene 384286 385062 . - . ID=gene-NYQ15_RS02120;Name=NYQ15_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02120 NZ_CP103431.1 Protein Homology CDS 384286 385062 . - 0 ID=cds-WP_005771649.1;Parent=gene-NYQ15_RS02120;Dbxref=GenBank:WP_005771649.1;Name=WP_005771649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819468.1;locus_tag=NYQ15_RS02120;product=folate-binding protein YgfZ;protein_id=WP_005771649.1;transl_table=11 NZ_CP103431.1 RefSeq gene 385169 386455 . + . ID=gene-NYQ15_RS02125;Name=NYQ15_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02125 NZ_CP103431.1 Protein Homology CDS 385169 386455 . + 0 ID=cds-WP_098953237.1;Parent=gene-NYQ15_RS02125;Dbxref=GenBank:WP_098953237.1;Name=WP_098953237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819469.1;locus_tag=NYQ15_RS02125;product=MFS transporter;protein_id=WP_098953237.1;transl_table=11 NZ_CP103431.1 RefSeq gene 386522 387043 . + . ID=gene-NYQ15_RS02130;Name=NYQ15_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02130 NZ_CP103431.1 Protein Homology CDS 386522 387043 . + 0 ID=cds-WP_005771648.1;Parent=gene-NYQ15_RS02130;Dbxref=GenBank:WP_005771648.1;Name=WP_005771648.1;Ontology_term=GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819470.1;locus_tag=NYQ15_RS02130;product=mechanosensitive ion channel family protein;protein_id=WP_005771648.1;transl_table=11 NZ_CP103431.1 RefSeq gene 387622 388065 . - . ID=gene-NYQ15_RS02140;Name=NYQ15_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02140 NZ_CP103431.1 GeneMarkS-2+ CDS 387622 388065 . - 0 ID=cds-WP_230579798.1;Parent=gene-NYQ15_RS02140;Dbxref=GenBank:WP_230579798.1;Name=WP_230579798.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS02140;product=hypothetical protein;protein_id=WP_230579798.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 388203 388568 . - . ID=gene-NYQ15_RS02145;Name=NYQ15_RS02145;end_range=388568,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS02145;partial=true;pseudo=true NZ_CP103431.1 Protein Homology CDS 388203 388568 . - 2 ID=cds-NYQ15_RS02145;Parent=gene-NYQ15_RS02145;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=388568,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819473.1;locus_tag=NYQ15_RS02145;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 388583 388981 . - . ID=gene-NYQ15_RS02150;Name=NYQ15_RS02150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS02150;partial=true;pseudo=true;start_range=.,388583 NZ_CP103431.1 Protein Homology CDS 388583 388981 . - 0 ID=cds-NYQ15_RS02150;Parent=gene-NYQ15_RS02150;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819473.1;locus_tag=NYQ15_RS02150;partial=true;product=hypothetical protein;pseudo=true;start_range=.,388583;transl_table=11 NZ_CP103431.1 RefSeq gene 389215 389802 . + . ID=gene-NYQ15_RS02155;Name=NYQ15_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02155 NZ_CP103431.1 Protein Homology CDS 389215 389802 . + 0 ID=cds-WP_005771643.1;Parent=gene-NYQ15_RS02155;Dbxref=GenBank:WP_005771643.1;Name=WP_005771643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997189.1;locus_tag=NYQ15_RS02155;product=hypothetical protein;protein_id=WP_005771643.1;transl_table=11 NZ_CP103431.1 RefSeq gene 389805 389939 . + . ID=gene-NYQ15_RS02160;Name=NYQ15_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02160 NZ_CP103431.1 Protein Homology CDS 389805 389939 . + 0 ID=cds-WP_010957575.1;Parent=gene-NYQ15_RS02160;Dbxref=GenBank:WP_010957575.1;Name=WP_010957575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819476.1;locus_tag=NYQ15_RS02160;product=hypothetical protein;protein_id=WP_010957575.1;transl_table=11 NZ_CP103431.1 RefSeq gene 389917 390114 . + . ID=gene-NYQ15_RS02165;Name=NYQ15_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02165 NZ_CP103431.1 Protein Homology CDS 389917 390114 . + 0 ID=cds-WP_005771639.1;Parent=gene-NYQ15_RS02165;Dbxref=GenBank:WP_005771639.1;Name=WP_005771639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819477.1;locus_tag=NYQ15_RS02165;product=hypothetical protein;protein_id=WP_005771639.1;transl_table=11 NZ_CP103431.1 RefSeq gene 390213 390728 . - . ID=gene-NYQ15_RS02175;Name=NYQ15_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02175 NZ_CP103431.1 Protein Homology CDS 390213 390728 . - 0 ID=cds-WP_005771385.1;Parent=gene-NYQ15_RS02175;Dbxref=GenBank:WP_005771385.1;Name=WP_005771385.1;Ontology_term=GO:0003677,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819478.1;locus_tag=NYQ15_RS02175;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_005771385.1;transl_table=11 NZ_CP103431.1 RefSeq gene 390734 391081 . - . ID=gene-NYQ15_RS02180;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=NYQ15_RS02180 NZ_CP103431.1 Protein Homology CDS 390734 391081 . - 0 ID=cds-WP_005771383.1;Parent=gene-NYQ15_RS02180;Dbxref=GenBank:WP_005771383.1;Name=WP_005771383.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819479.1;locus_tag=NYQ15_RS02180;product=50S ribosomal protein L19;protein_id=WP_005771383.1;transl_table=11 NZ_CP103431.1 RefSeq gene 391078 391818 . - . ID=gene-NYQ15_RS02185;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=NYQ15_RS02185 NZ_CP103431.1 Protein Homology CDS 391078 391818 . - 0 ID=cds-WP_040070832.1;Parent=gene-NYQ15_RS02185;Dbxref=GenBank:WP_040070832.1;Name=WP_040070832.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819480.1;locus_tag=NYQ15_RS02185;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_040070832.1;transl_table=11 NZ_CP103431.1 RefSeq gene 391820 392326 . - . ID=gene-NYQ15_RS02190;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=NYQ15_RS02190 NZ_CP103431.1 Protein Homology CDS 391820 392326 . - 0 ID=cds-WP_010957579.1;Parent=gene-NYQ15_RS02190;Dbxref=GenBank:WP_010957579.1;Name=WP_010957579.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819481.1;locus_tag=NYQ15_RS02190;product=ribosome maturation factor RimM;protein_id=WP_010957579.1;transl_table=11 NZ_CP103431.1 RefSeq gene 392405 392818 . - . ID=gene-NYQ15_RS02195;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=NYQ15_RS02195 NZ_CP103431.1 Protein Homology CDS 392405 392818 . - 0 ID=cds-WP_005771377.1;Parent=gene-NYQ15_RS02195;Dbxref=GenBank:WP_005771377.1;Name=WP_005771377.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771377.1;locus_tag=NYQ15_RS02195;product=30S ribosomal protein S16;protein_id=WP_005771377.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 393265 393975 . + . ID=gene-NYQ15_RS02200;Name=NYQ15_RS02200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS02200;pseudo=true NZ_CP103431.1 Protein Homology CDS 393265 393975 . + 0 ID=cds-NYQ15_RS02200;Parent=gene-NYQ15_RS02200;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819483.1;locus_tag=NYQ15_RS02200;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 394067 394621 . - . ID=gene-NYQ15_RS02210;Name=ankF;gbkey=Gene;gene=ankF;gene_biotype=protein_coding;locus_tag=NYQ15_RS02210 NZ_CP103431.1 Protein Homology CDS 394067 394621 . - 0 ID=cds-WP_005771371.1;Parent=gene-NYQ15_RS02210;Dbxref=GenBank:WP_005771371.1;Name=WP_005771371.1;gbkey=CDS;gene=ankF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819484.1;locus_tag=NYQ15_RS02210;product=ankyrin repeat domain-containing T4SS effector AnkF;protein_id=WP_005771371.1;transl_table=11 NZ_CP103431.1 RefSeq gene 394660 394755 . + . ID=gene-NYQ15_RS02215;Name=NYQ15_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02215 NZ_CP103431.1 Protein Homology CDS 394660 394755 . + 0 ID=cds-WP_010957583.1;Parent=gene-NYQ15_RS02215;Dbxref=GenBank:WP_010957583.1;Name=WP_010957583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819485.1;locus_tag=NYQ15_RS02215;product=hypothetical protein;protein_id=WP_010957583.1;transl_table=11 NZ_CP103431.1 RefSeq gene 394756 395751 . + . ID=gene-NYQ15_RS02220;Name=NYQ15_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02220 NZ_CP103431.1 Protein Homology CDS 394756 395751 . + 0 ID=cds-WP_005771369.1;Parent=gene-NYQ15_RS02220;Dbxref=GenBank:WP_005771369.1;Name=WP_005771369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771369.1;locus_tag=NYQ15_RS02220;product=MBL fold metallo-hydrolase;protein_id=WP_005771369.1;transl_table=11 NZ_CP103431.1 RefSeq gene 395780 397165 . - . ID=gene-NYQ15_RS02225;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=NYQ15_RS02225 NZ_CP103431.1 Protein Homology CDS 395780 397165 . - 0 ID=cds-WP_012570320.1;Parent=gene-NYQ15_RS02225;Dbxref=GenBank:WP_012570320.1;Name=WP_012570320.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819486.1;locus_tag=NYQ15_RS02225;product=signal recognition particle protein;protein_id=WP_012570320.1;transl_table=11 NZ_CP103431.1 RefSeq gene 397190 397738 . + . ID=gene-NYQ15_RS02230;Name=NYQ15_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02230 NZ_CP103431.1 Protein Homology CDS 397190 397738 . + 0 ID=cds-WP_010957585.1;Parent=gene-NYQ15_RS02230;Dbxref=GenBank:WP_010957585.1;Name=WP_010957585.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819487.2;locus_tag=NYQ15_RS02230;product=inner membrane protein YpjD;protein_id=WP_010957585.1;transl_table=11 NZ_CP103431.1 RefSeq gene 397735 398988 . + . ID=gene-NYQ15_RS02235;Name=NYQ15_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02235 NZ_CP103431.1 Protein Homology CDS 397735 398988 . + 0 ID=cds-WP_005771366.1;Parent=gene-NYQ15_RS02235;Dbxref=GenBank:WP_005771366.1;Name=WP_005771366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819488.1;locus_tag=NYQ15_RS02235;product=HlyC/CorC family transporter;protein_id=WP_005771366.1;transl_table=11 NZ_CP103431.1 RefSeq gene 398990 399550 . + . ID=gene-NYQ15_RS02240;Name=NYQ15_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02240 NZ_CP103431.1 Protein Homology CDS 398990 399550 . + 0 ID=cds-WP_012570318.1;Parent=gene-NYQ15_RS02240;Dbxref=GenBank:WP_012570318.1;Name=WP_012570318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819489.2;locus_tag=NYQ15_RS02240;product=GspH/FimT family pseudopilin;protein_id=WP_012570318.1;transl_table=11 NZ_CP103431.1 RefSeq gene 399585 400280 . + . ID=gene-NYQ15_RS02245;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=NYQ15_RS02245 NZ_CP103431.1 Protein Homology CDS 399585 400280 . + 0 ID=cds-WP_005771364.1;Parent=gene-NYQ15_RS02245;Dbxref=GenBank:WP_005771364.1;Name=WP_005771364.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819490.1;locus_tag=NYQ15_RS02245;product=adenylate kinase;protein_id=WP_005771364.1;transl_table=11 NZ_CP103431.1 RefSeq gene 400314 400679 . + . ID=gene-NYQ15_RS02250;Name=NYQ15_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02250 NZ_CP103431.1 Protein Homology CDS 400314 400679 . + 0 ID=cds-WP_005771361.1;Parent=gene-NYQ15_RS02250;Dbxref=GenBank:WP_005771361.1;Name=WP_005771361.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819491.1;locus_tag=NYQ15_RS02250;product=co-chaperone YbbN;protein_id=WP_005771361.1;transl_table=11 NZ_CP103431.1 RefSeq gene 400705 401058 . - . ID=gene-NYQ15_RS02255;Name=hcbA;gbkey=Gene;gene=hcbA;gene_biotype=protein_coding;locus_tag=NYQ15_RS02255 NZ_CP103431.1 Protein Homology CDS 400705 401058 . - 0 ID=cds-WP_010957589.1;Parent=gene-NYQ15_RS02255;Dbxref=GenBank:WP_010957589.1;Name=WP_010957589.1;gbkey=CDS;gene=hcbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819492.1;locus_tag=NYQ15_RS02255;product=histone-like protein Hq1;protein_id=WP_010957589.1;transl_table=11 NZ_CP103431.1 RefSeq gene 401349 401750 . + . ID=gene-NYQ15_RS02260;Name=NYQ15_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02260 NZ_CP103431.1 Protein Homology CDS 401349 401750 . + 0 ID=cds-WP_005771352.1;Parent=gene-NYQ15_RS02260;Dbxref=GenBank:WP_005771352.1;Name=WP_005771352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819494.1;locus_tag=NYQ15_RS02260;product=DUF2147 domain-containing protein;protein_id=WP_005771352.1;transl_table=11 NZ_CP103431.1 RefSeq gene 401780 402949 . + . ID=gene-NYQ15_RS02265;Name=NYQ15_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02265 NZ_CP103431.1 Protein Homology CDS 401780 402949 . + 0 ID=cds-WP_259431105.1;Parent=gene-NYQ15_RS02265;Dbxref=GenBank:WP_259431105.1;Name=WP_259431105.1;Ontology_term=GO:0006812,GO:0055085,GO:1902600,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018578724.1;locus_tag=NYQ15_RS02265;product=cation:proton antiporter;protein_id=WP_259431105.1;transl_table=11 NZ_CP103431.1 RefSeq gene 403025 403801 . + . ID=gene-NYQ15_RS02270;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=NYQ15_RS02270 NZ_CP103431.1 Protein Homology CDS 403025 403801 . + 0 ID=cds-WP_005771347.1;Parent=gene-NYQ15_RS02270;Dbxref=GenBank:WP_005771347.1;Name=WP_005771347.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819496.1;locus_tag=NYQ15_RS02270;product=regulatory signaling modulator protein AmpE;protein_id=WP_005771347.1;transl_table=11 NZ_CP103431.1 RefSeq gene 403846 406500 . + . ID=gene-NYQ15_RS02275;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=NYQ15_RS02275 NZ_CP103431.1 Protein Homology CDS 403846 406500 . + 0 ID=cds-WP_005772760.1;Parent=gene-NYQ15_RS02275;Dbxref=GenBank:WP_005772760.1;Name=WP_005772760.1;Ontology_term=GO:0006086,GO:0004738,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819497.1;locus_tag=NYQ15_RS02275;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_005772760.1;transl_table=11 NZ_CP103431.1 RefSeq gene 406566 407876 . + . ID=gene-NYQ15_RS02280;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=NYQ15_RS02280 NZ_CP103431.1 Protein Homology CDS 406566 407876 . + 0 ID=cds-WP_005771342.1;Parent=gene-NYQ15_RS02280;Dbxref=GenBank:WP_005771342.1;Name=WP_005771342.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819498.1;locus_tag=NYQ15_RS02280;product=dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_005771342.1;transl_table=11 NZ_CP103431.1 RefSeq gene 407889 409313 . + . ID=gene-NYQ15_RS02285;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=NYQ15_RS02285 NZ_CP103431.1 Protein Homology CDS 407889 409313 . + 0 ID=cds-WP_005772762.1;Parent=gene-NYQ15_RS02285;Dbxref=GenBank:WP_005772762.1;Name=WP_005772762.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819499.1;locus_tag=NYQ15_RS02285;product=dihydrolipoyl dehydrogenase;protein_id=WP_005772762.1;transl_table=11 NZ_CP103431.1 RefSeq gene 409344 409697 . - . ID=gene-NYQ15_RS02290;Name=NYQ15_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02290 NZ_CP103431.1 Protein Homology CDS 409344 409697 . - 0 ID=cds-WP_230454427.1;Parent=gene-NYQ15_RS02290;Dbxref=GenBank:WP_230454427.1;Name=WP_230454427.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012383.5;locus_tag=NYQ15_RS02290;product=ComF family protein;protein_id=WP_230454427.1;transl_table=11 NZ_CP103431.1 RefSeq gene 409682 409957 . - . ID=gene-NYQ15_RS02295;Name=NYQ15_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02295 NZ_CP103431.1 GeneMarkS-2+ CDS 409682 409957 . - 0 ID=cds-WP_230454428.1;Parent=gene-NYQ15_RS02295;Dbxref=GenBank:WP_230454428.1;Name=WP_230454428.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS02295;product=ComF family protein;protein_id=WP_230454428.1;transl_table=11 NZ_CP103431.1 RefSeq gene 409940 410035 . + . ID=gene-NYQ15_RS02300;Name=NYQ15_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02300 NZ_CP103431.1 Protein Homology CDS 409940 410035 . + 0 ID=cds-WP_010957595.1;Parent=gene-NYQ15_RS02300;Dbxref=GenBank:WP_010957595.1;Name=WP_010957595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819500.1;locus_tag=NYQ15_RS02300;product=hypothetical protein;protein_id=WP_010957595.1;transl_table=11 NZ_CP103431.1 RefSeq gene 410610 411458 . + . ID=gene-NYQ15_RS02310;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=NYQ15_RS02310 NZ_CP103431.1 Protein Homology CDS 410610 411458 . + 0 ID=cds-WP_259411754.1;Parent=gene-NYQ15_RS02310;Dbxref=GenBank:WP_259411754.1;Name=WP_259411754.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819502.1;locus_tag=NYQ15_RS02310;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_259411754.1;transl_table=11 NZ_CP103431.1 RefSeq gene 411459 411707 . - . ID=gene-NYQ15_RS02315;Name=NYQ15_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02315 NZ_CP103431.1 Protein Homology CDS 411459 411707 . - 0 ID=cds-WP_005771337.1;Parent=gene-NYQ15_RS02315;Dbxref=GenBank:WP_005771337.1;Name=WP_005771337.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819503.1;locus_tag=NYQ15_RS02315;product=exodeoxyribonuclease VII small subunit;protein_id=WP_005771337.1;transl_table=11 NZ_CP103431.1 RefSeq gene 411720 411923 . - . ID=gene-NYQ15_RS02320;Name=NYQ15_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02320 NZ_CP103431.1 Protein Homology CDS 411720 411923 . - 0 ID=cds-WP_005771335.1;Parent=gene-NYQ15_RS02320;Dbxref=GenBank:WP_005771335.1;Name=WP_005771335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819504.1;locus_tag=NYQ15_RS02320;product=CBU_0469 family Dot/Icm T4SS effector;protein_id=WP_005771335.1;transl_table=11 NZ_CP103431.1 RefSeq gene 411970 412626 . - . ID=gene-NYQ15_RS02325;Name=NYQ15_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02325 NZ_CP103431.1 Protein Homology CDS 411970 412626 . - 0 ID=cds-WP_005771333.1;Parent=gene-NYQ15_RS02325;Dbxref=GenBank:WP_005771333.1;Name=WP_005771333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819505.1;locus_tag=NYQ15_RS02325;product=phosphoribosyltransferase;protein_id=WP_005771333.1;transl_table=11 NZ_CP103431.1 RefSeq gene 412962 413243 . + . ID=gene-NYQ15_RS02330;Name=NYQ15_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02330 NZ_CP103431.1 Protein Homology CDS 412962 413243 . + 0 ID=cds-WP_005771331.1;Parent=gene-NYQ15_RS02330;Dbxref=GenBank:WP_005771331.1;Name=WP_005771331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771331.1;locus_tag=NYQ15_RS02330;product=hypothetical protein;protein_id=WP_005771331.1;transl_table=11 NZ_CP103431.1 RefSeq gene 413257 413685 . + . ID=gene-NYQ15_RS02335;Name=NYQ15_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02335 NZ_CP103431.1 GeneMarkS-2+ CDS 413257 413685 . + 0 ID=cds-WP_230454429.1;Parent=gene-NYQ15_RS02335;Dbxref=GenBank:WP_230454429.1;Name=WP_230454429.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS02335;product=hypothetical protein;protein_id=WP_230454429.1;transl_table=11 NZ_CP103431.1 RefSeq gene 413682 414443 . + . ID=gene-NYQ15_RS02340;Name=NYQ15_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02340 NZ_CP103431.1 GeneMarkS-2+ CDS 413682 414443 . + 0 ID=cds-WP_230454430.1;Parent=gene-NYQ15_RS02340;Dbxref=GenBank:WP_230454430.1;Name=WP_230454430.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS02340;product=hypothetical protein;protein_id=WP_230454430.1;transl_table=11 NZ_CP103431.1 RefSeq gene 414516 416321 . + . ID=gene-NYQ15_RS02345;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=NYQ15_RS02345 NZ_CP103431.1 Protein Homology CDS 414516 416321 . + 0 ID=cds-WP_098953141.1;Parent=gene-NYQ15_RS02345;Dbxref=GenBank:WP_098953141.1;Name=WP_098953141.1;Ontology_term=GO:0006310,GO:0009432,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819507.1;locus_tag=NYQ15_RS02345;product=DNA helicase RecQ;protein_id=WP_098953141.1;transl_table=11 NZ_CP103431.1 RefSeq gene 416386 416775 . + . ID=gene-NYQ15_RS02350;Name=NYQ15_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02350 NZ_CP103431.1 Protein Homology CDS 416386 416775 . + 0 ID=cds-WP_005771322.1;Parent=gene-NYQ15_RS02350;Dbxref=GenBank:WP_005771322.1;Name=WP_005771322.1;Ontology_term=GO:0030261,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819508.2;locus_tag=NYQ15_RS02350;product=HU family DNA-binding protein;protein_id=WP_005771322.1;transl_table=11 NZ_CP103431.1 RefSeq gene 416787 417035 . + . ID=gene-NYQ15_RS02355;Name=NYQ15_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02355 NZ_CP103431.1 Protein Homology CDS 416787 417035 . + 0 ID=cds-WP_010957600.1;Parent=gene-NYQ15_RS02355;Dbxref=GenBank:WP_010957600.1;Name=WP_010957600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819509.1;locus_tag=NYQ15_RS02355;product=hypothetical protein;protein_id=WP_010957600.1;transl_table=11 NZ_CP103431.1 RefSeq gene 417295 417537 . + . ID=gene-NYQ15_RS02360;Name=NYQ15_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02360 NZ_CP103431.1 GeneMarkS-2+ CDS 417295 417537 . + 0 ID=cds-WP_259431032.1;Parent=gene-NYQ15_RS02360;Dbxref=GenBank:WP_259431032.1;Name=WP_259431032.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS02360;product=hypothetical protein;protein_id=WP_259431032.1;transl_table=11 NZ_CP103431.1 RefSeq gene 417577 419259 . + . ID=gene-NYQ15_RS02365;Name=NYQ15_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02365 NZ_CP103431.1 Protein Homology CDS 417577 419259 . + 0 ID=cds-WP_259431033.1;Parent=gene-NYQ15_RS02365;Dbxref=GenBank:WP_259431033.1;Name=WP_259431033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819511.1;locus_tag=NYQ15_RS02365;product=hypothetical protein;protein_id=WP_259431033.1;transl_table=11 NZ_CP103431.1 RefSeq gene 419269 419547 . - . ID=gene-NYQ15_RS02370;Name=NYQ15_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02370 NZ_CP103431.1 Protein Homology CDS 419269 419547 . - 0 ID=cds-WP_005771310.1;Parent=gene-NYQ15_RS02370;Dbxref=GenBank:WP_005771310.1;Name=WP_005771310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819512.1;locus_tag=NYQ15_RS02370;product=DUF3175 domain-containing protein;protein_id=WP_005771310.1;transl_table=11 NZ_CP103431.1 RefSeq gene 419567 419665 . + . ID=gene-NYQ15_RS02375;Name=NYQ15_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02375 NZ_CP103431.1 Protein Homology CDS 419567 419665 . + 0 ID=cds-WP_005771309.1;Parent=gene-NYQ15_RS02375;Dbxref=GenBank:WP_005771309.1;Name=WP_005771309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819513.1;locus_tag=NYQ15_RS02375;product=hypothetical protein;protein_id=WP_005771309.1;transl_table=11 NZ_CP103431.1 RefSeq gene 419785 419955 . + . ID=gene-NYQ15_RS02380;Name=NYQ15_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02380 NZ_CP103431.1 Protein Homology CDS 419785 419955 . + 0 ID=cds-WP_012570821.1;Parent=gene-NYQ15_RS02380;Dbxref=GenBank:WP_012570821.1;Name=WP_012570821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332965.1;locus_tag=NYQ15_RS02380;product=Trm112 family protein;protein_id=WP_012570821.1;transl_table=11 NZ_CP103431.1 RefSeq gene 419945 420706 . + . ID=gene-NYQ15_RS02385;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=NYQ15_RS02385 NZ_CP103431.1 Protein Homology CDS 419945 420706 . + 0 ID=cds-WP_010957604.1;Parent=gene-NYQ15_RS02385;Dbxref=GenBank:WP_010957604.1;Name=WP_010957604.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819514.2;locus_tag=NYQ15_RS02385;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_010957604.1;transl_table=11 NZ_CP103431.1 RefSeq gene 420690 421169 . - . ID=gene-NYQ15_RS02390;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=NYQ15_RS02390 NZ_CP103431.1 Protein Homology CDS 420690 421169 . - 0 ID=cds-WP_005771305.1;Parent=gene-NYQ15_RS02390;Dbxref=GenBank:WP_005771305.1;Name=WP_005771305.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819515.1;locus_tag=NYQ15_RS02390;product=transcriptional regulator ArgR;protein_id=WP_005771305.1;transl_table=11 NZ_CP103431.1 RefSeq gene 421263 422015 . + . ID=gene-NYQ15_RS02395;Name=NYQ15_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02395 NZ_CP103431.1 Protein Homology CDS 421263 422015 . + 0 ID=cds-WP_005771303.1;Parent=gene-NYQ15_RS02395;Dbxref=GenBank:WP_005771303.1;Name=WP_005771303.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819516.1;locus_tag=NYQ15_RS02395;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_005771303.1;transl_table=11 NZ_CP103431.1 RefSeq gene 422019 422828 . + . ID=gene-NYQ15_RS02400;Name=NYQ15_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02400 NZ_CP103431.1 Protein Homology CDS 422019 422828 . + 0 ID=cds-WP_005771300.1;Parent=gene-NYQ15_RS02400;Dbxref=GenBank:WP_005771300.1;Name=WP_005771300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819517.1;locus_tag=NYQ15_RS02400;product=arginine ABC transporter substrate-binding protein;protein_id=WP_005771300.1;transl_table=11 NZ_CP103431.1 RefSeq gene 422828 423493 . + . ID=gene-NYQ15_RS02405;Name=NYQ15_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02405 NZ_CP103431.1 Protein Homology CDS 422828 423493 . + 0 ID=cds-WP_005771298.1;Parent=gene-NYQ15_RS02405;Dbxref=GenBank:WP_005771298.1;Name=WP_005771298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819518.1;locus_tag=NYQ15_RS02405;product=ABC transporter permease;protein_id=WP_005771298.1;transl_table=11 NZ_CP103431.1 RefSeq gene 423490 424161 . + . ID=gene-NYQ15_RS02410;Name=NYQ15_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02410 NZ_CP103431.1 Protein Homology CDS 423490 424161 . + 0 ID=cds-WP_005772761.1;Parent=gene-NYQ15_RS02410;Dbxref=GenBank:WP_005772761.1;Name=WP_005772761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819519.1;locus_tag=NYQ15_RS02410;product=ABC transporter permease;protein_id=WP_005772761.1;transl_table=11 NZ_CP103431.1 RefSeq gene 424174 425790 . + . ID=gene-NYQ15_RS02415;Name=NYQ15_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02415 NZ_CP103431.1 Protein Homology CDS 424174 425790 . + 0 ID=cds-WP_005772765.1;Parent=gene-NYQ15_RS02415;Dbxref=GenBank:WP_005772765.1;Name=WP_005772765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819520.1;locus_tag=NYQ15_RS02415;product=hypothetical protein;protein_id=WP_005772765.1;transl_table=11 NZ_CP103431.1 RefSeq gene 425850 428012 . - . ID=gene-NYQ15_RS02420;Name=NYQ15_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02420 NZ_CP103431.1 Protein Homology CDS 425850 428012 . - 0 ID=cds-WP_005772757.1;Parent=gene-NYQ15_RS02420;Dbxref=GenBank:WP_005772757.1;Name=WP_005772757.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819521.1;locus_tag=NYQ15_RS02420;product=Rne/Rng family ribonuclease;protein_id=WP_005772757.1;transl_table=11 NZ_CP103431.1 RefSeq gene 428341 429267 . + . ID=gene-NYQ15_RS02425;Name=NYQ15_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02425 NZ_CP103431.1 Protein Homology CDS 428341 429267 . + 0 ID=cds-WP_005771291.1;Parent=gene-NYQ15_RS02425;Dbxref=GenBank:WP_005771291.1;Name=WP_005771291.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_338279.1;locus_tag=NYQ15_RS02425;product=RluA family pseudouridine synthase;protein_id=WP_005771291.1;transl_table=11 NZ_CP103431.1 RefSeq gene 429296 430003 . + . ID=gene-NYQ15_RS02430;Name=NYQ15_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02430 NZ_CP103431.1 Protein Homology CDS 429296 430003 . + 0 ID=cds-WP_005772758.1;Parent=gene-NYQ15_RS02430;Dbxref=GenBank:WP_005772758.1;Name=WP_005772758.1;Ontology_term=GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819522.1;locus_tag=NYQ15_RS02430;product=metallophosphoesterase family protein;protein_id=WP_005772758.1;transl_table=11 NZ_CP103431.1 RefSeq gene 430095 431129 . - . ID=gene-NYQ15_RS02435;Name=NYQ15_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02435 NZ_CP103431.1 Protein Homology CDS 430095 431129 . - 0 ID=cds-WP_005771289.1;Parent=gene-NYQ15_RS02435;Dbxref=GenBank:WP_005771289.1;Name=WP_005771289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819523.1;locus_tag=NYQ15_RS02435;product=phospholipase A;protein_id=WP_005771289.1;transl_table=11 NZ_CP103431.1 RefSeq gene 431185 432969 . - . ID=gene-NYQ15_RS02440;Name=polX;gbkey=Gene;gene=polX;gene_biotype=protein_coding;locus_tag=NYQ15_RS02440 NZ_CP103431.1 Protein Homology CDS 431185 432969 . - 0 ID=cds-WP_010957611.1;Parent=gene-NYQ15_RS02440;Dbxref=GenBank:WP_010957611.1;Name=WP_010957611.1;Ontology_term=GO:0006281,GO:0003677,GO:0003887;gbkey=CDS;gene=polX;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819524.2;locus_tag=NYQ15_RS02440;product=DNA polymerase/3'-5' exonuclease PolX;protein_id=WP_010957611.1;transl_table=11 NZ_CP103431.1 RefSeq gene 433113 433307 . + . ID=gene-NYQ15_RS02445;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=NYQ15_RS02445 NZ_CP103431.1 Protein Homology CDS 433113 433307 . + 0 ID=cds-WP_005771287.1;Parent=gene-NYQ15_RS02445;Dbxref=GenBank:WP_005771287.1;Name=WP_005771287.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819525.1;locus_tag=NYQ15_RS02445;product=50S ribosomal protein L32;protein_id=WP_005771287.1;transl_table=11 NZ_CP103431.1 RefSeq gene 433315 434346 . + . ID=gene-NYQ15_RS02450;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=NYQ15_RS02450 NZ_CP103431.1 Protein Homology CDS 433315 434346 . + 0 ID=cds-WP_005771274.1;Parent=gene-NYQ15_RS02450;Dbxref=GenBank:WP_005771274.1;Name=WP_005771274.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819526.1;locus_tag=NYQ15_RS02450;product=phosphate acyltransferase PlsX;protein_id=WP_005771274.1;transl_table=11 NZ_CP103431.1 RefSeq gene 434343 435302 . + . ID=gene-NYQ15_RS02455;Name=NYQ15_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02455 NZ_CP103431.1 Protein Homology CDS 434343 435302 . + 0 ID=cds-WP_005771272.1;Parent=gene-NYQ15_RS02455;Dbxref=GenBank:WP_005771272.1;Name=WP_005771272.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819527.1;locus_tag=NYQ15_RS02455;product=beta-ketoacyl-ACP synthase III;protein_id=WP_005771272.1;transl_table=11 NZ_CP103431.1 RefSeq gene 435403 436344 . + . ID=gene-NYQ15_RS02460;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=NYQ15_RS02460 NZ_CP103431.1 Protein Homology CDS 435403 436344 . + 0 ID=cds-WP_005771270.1;Parent=gene-NYQ15_RS02460;Dbxref=GenBank:WP_005771270.1;Name=WP_005771270.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819528.1;locus_tag=NYQ15_RS02460;product=ACP S-malonyltransferase;protein_id=WP_005771270.1;transl_table=11 NZ_CP103431.1 RefSeq gene 436420 437169 . + . ID=gene-NYQ15_RS02465;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=NYQ15_RS02465 NZ_CP103431.1 Protein Homology CDS 436420 437169 . + 0 ID=cds-WP_005771268.1;Parent=gene-NYQ15_RS02465;Dbxref=GenBank:WP_005771268.1;Name=WP_005771268.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819529.1;locus_tag=NYQ15_RS02465;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_005771268.1;transl_table=11 NZ_CP103431.1 RefSeq gene 437237 437491 . + . ID=gene-NYQ15_RS02470;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=NYQ15_RS02470 NZ_CP103431.1 Protein Homology CDS 437237 437491 . + 0 ID=cds-WP_005771263.1;Parent=gene-NYQ15_RS02470;Dbxref=GenBank:WP_005771263.1;Name=WP_005771263.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819530.1;locus_tag=NYQ15_RS02470;product=acyl carrier protein;protein_id=WP_005771263.1;transl_table=11 NZ_CP103431.1 RefSeq gene 437536 438780 . + . ID=gene-NYQ15_RS02475;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=NYQ15_RS02475 NZ_CP103431.1 Protein Homology CDS 437536 438780 . + 0 ID=cds-WP_005771261.1;Parent=gene-NYQ15_RS02475;Dbxref=GenBank:WP_005771261.1;Name=WP_005771261.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819531.1;locus_tag=NYQ15_RS02475;product=beta-ketoacyl-ACP synthase II;protein_id=WP_005771261.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 438790 439901 . + . ID=gene-NYQ15_RS02480;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=pseudogene;locus_tag=NYQ15_RS02480;pseudo=true NZ_CP103431.1 Protein Homology CDS 438790 439901 . + 0 ID=cds-NYQ15_RS02480;Parent=gene-NYQ15_RS02480;Note=frameshifted;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819532.1;locus_tag=NYQ15_RS02480;product=endolytic transglycosylase MltG;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 439811 440482 . + . ID=gene-NYQ15_RS02485;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=NYQ15_RS02485 NZ_CP103431.1 Protein Homology CDS 439811 440482 . + 0 ID=cds-WP_005771257.1;Parent=gene-NYQ15_RS02485;Dbxref=GenBank:WP_005771257.1;Name=WP_005771257.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819533.3;locus_tag=NYQ15_RS02485;product=dTMP kinase;protein_id=WP_005771257.1;transl_table=11 NZ_CP103431.1 RefSeq gene 440479 441438 . + . ID=gene-NYQ15_RS02490;Name=NYQ15_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02490 NZ_CP103431.1 Protein Homology CDS 440479 441438 . + 0 ID=cds-WP_005772605.1;Parent=gene-NYQ15_RS02490;Dbxref=GenBank:WP_005772605.1;Name=WP_005772605.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408,GO:0009360;gbkey=CDS;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819534.1;locus_tag=NYQ15_RS02490;product=DNA polymerase III subunit delta';protein_id=WP_005772605.1;transl_table=11 NZ_CP103431.1 RefSeq gene 441457 441582 . + . ID=gene-NYQ15_RS02495;Name=NYQ15_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02495 NZ_CP103431.1 Protein Homology CDS 441457 441582 . + 0 ID=cds-WP_010957618.1;Parent=gene-NYQ15_RS02495;Dbxref=GenBank:WP_010957618.1;Name=WP_010957618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819535.1;locus_tag=NYQ15_RS02495;product=hypothetical protein;protein_id=WP_010957618.1;transl_table=11 NZ_CP103431.1 RefSeq gene 441602 442369 . + . ID=gene-NYQ15_RS02500;Name=NYQ15_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02500 NZ_CP103431.1 Protein Homology CDS 441602 442369 . + 0 ID=cds-WP_098953238.1;Parent=gene-NYQ15_RS02500;Dbxref=GenBank:WP_098953238.1;Name=WP_098953238.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819536.2;locus_tag=NYQ15_RS02500;product=TatD family hydrolase;protein_id=WP_098953238.1;transl_table=11 NZ_CP103431.1 RefSeq gene 442553 443632 . - . ID=gene-NYQ15_RS02510;Name=NYQ15_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02510 NZ_CP103431.1 Protein Homology CDS 442553 443632 . - 0 ID=cds-WP_005771244.1;Parent=gene-NYQ15_RS02510;Dbxref=GenBank:WP_005771244.1;Name=WP_005771244.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819537.1;locus_tag=NYQ15_RS02510;product=glutamine synthetase beta-grasp domain-containing protein;protein_id=WP_005771244.1;transl_table=11 NZ_CP103431.1 RefSeq gene 443795 445273 . - . ID=gene-NYQ15_RS02515;Name=NYQ15_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02515 NZ_CP103431.1 Protein Homology CDS 443795 445273 . - 0 ID=cds-WP_005772610.1;Parent=gene-NYQ15_RS02515;Dbxref=GenBank:WP_005772610.1;Name=WP_005772610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819538.1;locus_tag=NYQ15_RS02515;product=peptide MFS transporter;protein_id=WP_005772610.1;transl_table=11 NZ_CP103431.1 RefSeq gene 445393 446010 . - . ID=gene-NYQ15_RS02520;Name=NYQ15_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02520 NZ_CP103431.1 Protein Homology CDS 445393 446010 . - 0 ID=cds-WP_005772606.1;Parent=gene-NYQ15_RS02520;Dbxref=GenBank:WP_005772606.1;Name=WP_005772606.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819539.1;locus_tag=NYQ15_RS02520;product=GNAT family N-acetyltransferase;protein_id=WP_005772606.1;transl_table=11 NZ_CP103431.1 RefSeq gene 446450 448174 . + . ID=gene-NYQ15_RS02525;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=NYQ15_RS02525 NZ_CP103431.1 Protein Homology CDS 446450 448174 . + 0 ID=cds-WP_259431034.1;Parent=gene-NYQ15_RS02525;Dbxref=GenBank:WP_259431034.1;Name=WP_259431034.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819540.1;locus_tag=NYQ15_RS02525;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_259431034.1;transl_table=11 NZ_CP103431.1 RefSeq gene 448246 449271 . - . ID=gene-NYQ15_RS02530;Name=NYQ15_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02530 NZ_CP103431.1 Protein Homology CDS 448246 449271 . - 0 ID=cds-WP_259431035.1;Parent=gene-NYQ15_RS02530;Dbxref=GenBank:WP_259431035.1;Name=WP_259431035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819541.2;locus_tag=NYQ15_RS02530;product=DUF4351 domain-containing protein;protein_id=WP_259431035.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 449496 450208 . - . ID=gene-NYQ15_RS02535;Name=NYQ15_RS02535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS02535;pseudo=true NZ_CP103431.1 Protein Homology CDS 449496 450208 . - 0 ID=cds-NYQ15_RS02535;Parent=gene-NYQ15_RS02535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819542.1;locus_tag=NYQ15_RS02535;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 450258 450602 . + . ID=gene-NYQ15_RS02540;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=NYQ15_RS02540 NZ_CP103431.1 Protein Homology CDS 450258 450602 . + 0 ID=cds-WP_005771229.1;Parent=gene-NYQ15_RS02540;Dbxref=GenBank:WP_005771229.1;Name=WP_005771229.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819543.1;locus_tag=NYQ15_RS02540;product=trp operon repressor;protein_id=WP_005771229.1;transl_table=11 NZ_CP103431.1 RefSeq gene 450614 450916 . + . ID=gene-NYQ15_RS02545;Name=NYQ15_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02545 NZ_CP103431.1 Protein Homology CDS 450614 450916 . + 0 ID=cds-WP_005771226.1;Parent=gene-NYQ15_RS02545;Dbxref=GenBank:WP_005771226.1;Name=WP_005771226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819544.1;locus_tag=NYQ15_RS02545;product=hypothetical protein;protein_id=WP_005771226.1;transl_table=11 NZ_CP103431.1 RefSeq gene 451315 452586 . - . ID=gene-NYQ15_RS02550;Name=NYQ15_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02550 NZ_CP103431.1 Protein Homology CDS 451315 452586 . - 0 ID=cds-WP_230454416.1;Parent=gene-NYQ15_RS02550;Dbxref=GenBank:WP_230454416.1;Name=WP_230454416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997156.1;locus_tag=NYQ15_RS02550;product=MFS transporter;protein_id=WP_230454416.1;transl_table=11 NZ_CP103431.1 RefSeq gene 452623 453660 . - . ID=gene-NYQ15_RS02555;Name=NYQ15_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02555 NZ_CP103431.1 Protein Homology CDS 452623 453660 . - 0 ID=cds-WP_259431036.1;Parent=gene-NYQ15_RS02555;Dbxref=GenBank:WP_259431036.1;Name=WP_259431036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570290.1;locus_tag=NYQ15_RS02555;product=succinylglutamate desuccinylase/aspartoacylase family protein;protein_id=WP_259431036.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 453788 454935 . + . ID=gene-NYQ15_RS02560;Name=NYQ15_RS02560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS02560;pseudo=true NZ_CP103431.1 Protein Homology CDS 453788 454935 . + 0 ID=cds-NYQ15_RS02560;Parent=gene-NYQ15_RS02560;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819545.1;locus_tag=NYQ15_RS02560;product=CBU_0513 family Dot/Icm type IV secretion system effector;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 454935 455726 . + . ID=gene-NYQ15_RS02565;Name=NYQ15_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02565 NZ_CP103431.1 Protein Homology CDS 454935 455726 . + 0 ID=cds-WP_005771218.1;Parent=gene-NYQ15_RS02565;Dbxref=GenBank:WP_005771218.1;Name=WP_005771218.1;Ontology_term=GO:0006672,GO:0016811,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=ceramide metabolic process|0006672||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819546.1;locus_tag=NYQ15_RS02565;product=ceramidase domain-containing protein;protein_id=WP_005771218.1;transl_table=11 NZ_CP103431.1 RefSeq gene 455980 456090 . + . ID=gene-NYQ15_RS02570;Name=NYQ15_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02570 NZ_CP103431.1 Protein Homology CDS 455980 456090 . + 0 ID=cds-WP_077019594.1;Parent=gene-NYQ15_RS02570;Dbxref=GenBank:WP_077019594.1;Name=WP_077019594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332968.1;locus_tag=NYQ15_RS02570;product=hypothetical protein;protein_id=WP_077019594.1;transl_table=11 NZ_CP103431.1 RefSeq gene 456397 457716 . + . ID=gene-NYQ15_RS02575;Name=NYQ15_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02575 NZ_CP103431.1 Protein Homology CDS 456397 457716 . + 0 ID=cds-WP_005772608.1;Parent=gene-NYQ15_RS02575;Dbxref=GenBank:WP_005772608.1;Name=WP_005772608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819547.2;locus_tag=NYQ15_RS02575;product=MFS transporter;protein_id=WP_005772608.1;transl_table=11 NZ_CP103431.1 RefSeq gene 457814 457930 . + . ID=gene-NYQ15_RS02580;Name=NYQ15_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02580 NZ_CP103431.1 Protein Homology CDS 457814 457930 . + 0 ID=cds-WP_005771211.1;Parent=gene-NYQ15_RS02580;Dbxref=GenBank:WP_005771211.1;Name=WP_005771211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819548.1;locus_tag=NYQ15_RS02580;product=hypothetical protein;protein_id=WP_005771211.1;transl_table=11 NZ_CP103431.1 RefSeq gene 458110 458466 . - . ID=gene-NYQ15_RS02585;Name=NYQ15_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02585 NZ_CP103431.1 Protein Homology CDS 458110 458466 . - 0 ID=cds-WP_012570816.1;Parent=gene-NYQ15_RS02585;Dbxref=GenBank:WP_012570816.1;Name=WP_012570816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332969.1;locus_tag=NYQ15_RS02585;product=hypothetical protein;protein_id=WP_012570816.1;transl_table=11 NZ_CP103431.1 RefSeq gene 458819 458894 . - . ID=gene-NYQ15_RS02590;Name=NYQ15_RS02590;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS02590 NZ_CP103431.1 tRNAscan-SE tRNA 458819 458894 . - . ID=rna-NYQ15_RS02590;Parent=gene-NYQ15_RS02590;anticodon=(pos:complement(458859..458861));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS02590;product=tRNA-Asn NZ_CP103431.1 tRNAscan-SE exon 458819 458894 . - . ID=exon-NYQ15_RS02590-1;Parent=rna-NYQ15_RS02590;anticodon=(pos:complement(458859..458861));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS02590;product=tRNA-Asn NZ_CP103431.1 RefSeq gene 458949 460133 . - . ID=gene-NYQ15_RS02595;Name=NYQ15_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02595 NZ_CP103431.1 Protein Homology CDS 458949 460133 . - 0 ID=cds-WP_005771191.1;Parent=gene-NYQ15_RS02595;Dbxref=GenBank:WP_005771191.1;Name=WP_005771191.1;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220244.1;locus_tag=NYQ15_RS02595;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_005771191.1;transl_table=11 NZ_CP103431.1 RefSeq gene 460214 462232 . + . ID=gene-NYQ15_RS02600;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=NYQ15_RS02600 NZ_CP103431.1 Protein Homology CDS 460214 462232 . + 0 ID=cds-WP_259431037.1;Parent=gene-NYQ15_RS02600;Dbxref=GenBank:WP_259431037.1;Name=WP_259431037.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819550.1;locus_tag=NYQ15_RS02600;product=excinuclease ABC subunit UvrB;protein_id=WP_259431037.1;transl_table=11 NZ_CP103431.1 RefSeq gene 462292 462900 . + . ID=gene-NYQ15_RS02605;Name=NYQ15_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02605 NZ_CP103431.1 Protein Homology CDS 462292 462900 . + 0 ID=cds-WP_005771183.1;Parent=gene-NYQ15_RS02605;Dbxref=GenBank:WP_005771183.1;Name=WP_005771183.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819551.1;locus_tag=NYQ15_RS02605;product=DedA family protein;protein_id=WP_005771183.1;transl_table=11 NZ_CP103431.1 RefSeq gene 462930 463829 . - . ID=gene-NYQ15_RS02610;Name=NYQ15_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02610 NZ_CP103431.1 Protein Homology CDS 462930 463829 . - 0 ID=cds-WP_098953182.1;Parent=gene-NYQ15_RS02610;Dbxref=GenBank:WP_098953182.1;Name=WP_098953182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819552.2;locus_tag=NYQ15_RS02610;product=hydroxymethylglutaryl-CoA lyase;protein_id=WP_098953182.1;transl_table=11 NZ_CP103431.1 RefSeq gene 463816 465270 . - . ID=gene-NYQ15_RS02615;Name=NYQ15_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02615 NZ_CP103431.1 Protein Homology CDS 463816 465270 . - 0 ID=cds-WP_010957634.1;Parent=gene-NYQ15_RS02615;Dbxref=GenBank:WP_010957634.1;Name=WP_010957634.1;Ontology_term=GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819553.2;locus_tag=NYQ15_RS02615;product=TRZ/ATZ family hydrolase;protein_id=WP_010957634.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 465270 465533 . + . ID=gene-NYQ15_RS02620;Name=NYQ15_RS02620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS02620;partial=true;pseudo=true;start_range=.,465270 NZ_CP103431.1 Protein Homology CDS 465270 465533 . + 0 ID=cds-NYQ15_RS02620;Parent=gene-NYQ15_RS02620;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771875.1;locus_tag=NYQ15_RS02620;partial=true;product=transposase;pseudo=true;start_range=.,465270;transl_table=11 NZ_CP103431.1 RefSeq gene 467386 469938 . + . ID=gene-NYQ15_RS02625;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=NYQ15_RS02625 NZ_CP103431.1 Protein Homology CDS 467386 469938 . + 0 ID=cds-WP_098953171.1;Parent=gene-NYQ15_RS02625;Dbxref=GenBank:WP_098953171.1;Name=WP_098953171.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819556.2;locus_tag=NYQ15_RS02625;product=DNA gyrase subunit A;protein_id=WP_098953171.1;transl_table=11 NZ_CP103431.1 RefSeq gene 469999 471081 . + . ID=gene-NYQ15_RS02630;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=NYQ15_RS02630 NZ_CP103431.1 Protein Homology CDS 469999 471081 . + 0 ID=cds-WP_005771164.1;Parent=gene-NYQ15_RS02630;Dbxref=GenBank:WP_005771164.1;Name=WP_005771164.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819557.1;locus_tag=NYQ15_RS02630;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_005771164.1;transl_table=11 NZ_CP103431.1 RefSeq gene 471087 472403 . + . ID=gene-NYQ15_RS02635;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=NYQ15_RS02635 NZ_CP103431.1 Protein Homology CDS 471087 472403 . + 0 ID=cds-WP_005771162.1;Parent=gene-NYQ15_RS02635;Dbxref=GenBank:WP_005771162.1;Name=WP_005771162.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819558.1;locus_tag=NYQ15_RS02635;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_005771162.1;transl_table=11 NZ_CP103431.1 RefSeq gene 472404 473117 . + . ID=gene-NYQ15_RS02640;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=NYQ15_RS02640 NZ_CP103431.1 Protein Homology CDS 472404 473117 . + 0 ID=cds-WP_005771160.1;Parent=gene-NYQ15_RS02640;Dbxref=GenBank:WP_005771160.1;Name=WP_005771160.1;Ontology_term=GO:0015949,GO:0004127,GO:0005524;gbkey=CDS;gene=cmk;go_function=(d)CMP kinase activity|0004127||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819559.1;locus_tag=NYQ15_RS02640;product=(d)CMP kinase;protein_id=WP_005771160.1;transl_table=11 NZ_CP103431.1 RefSeq gene 473261 474916 . + . ID=gene-NYQ15_RS02645;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=NYQ15_RS02645 NZ_CP103431.1 Protein Homology CDS 473261 474916 . + 0 ID=cds-WP_259411760.1;Parent=gene-NYQ15_RS02645;Dbxref=GenBank:WP_259411760.1;Name=WP_259411760.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819560.3;locus_tag=NYQ15_RS02645;product=30S ribosomal protein S1;protein_id=WP_259411760.1;transl_table=11 NZ_CP103431.1 RefSeq gene 475071 475361 . + . ID=gene-NYQ15_RS02650;Name=NYQ15_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02650 NZ_CP103431.1 Protein Homology CDS 475071 475361 . + 0 ID=cds-WP_005771155.1;Parent=gene-NYQ15_RS02650;Dbxref=GenBank:WP_005771155.1;Name=WP_005771155.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819561.1;locus_tag=NYQ15_RS02650;product=lipopolysaccharide assembly protein LapA domain-containing protein;protein_id=WP_005771155.1;transl_table=11 NZ_CP103431.1 RefSeq gene 475358 476527 . + . ID=gene-NYQ15_RS02655;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=NYQ15_RS02655 NZ_CP103431.1 Protein Homology CDS 475358 476527 . + 0 ID=cds-WP_080735201.1;Parent=gene-NYQ15_RS02655;Dbxref=GenBank:WP_080735201.1;Name=WP_080735201.1;gbkey=CDS;gene=lapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819562.2;locus_tag=NYQ15_RS02655;product=lipopolysaccharide assembly protein LapB;protein_id=WP_080735201.1;transl_table=11 NZ_CP103431.1 RefSeq gene 476531 477241 . + . ID=gene-NYQ15_RS02660;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=NYQ15_RS02660 NZ_CP103431.1 Protein Homology CDS 476531 477241 . + 0 ID=cds-WP_005771152.1;Parent=gene-NYQ15_RS02660;Dbxref=GenBank:WP_005771152.1;Name=WP_005771152.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819563.1;locus_tag=NYQ15_RS02660;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_005771152.1;transl_table=11 NZ_CP103431.1 RefSeq gene 477304 477675 . + . ID=gene-NYQ15_RS02665;Name=NYQ15_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02665 NZ_CP103431.1 Protein Homology CDS 477304 477675 . + 0 ID=cds-WP_010957640.1;Parent=gene-NYQ15_RS02665;Dbxref=GenBank:WP_010957640.1;Name=WP_010957640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819564.2;locus_tag=NYQ15_RS02665;product=helix-hairpin-helix domain-containing protein;protein_id=WP_010957640.1;transl_table=11 NZ_CP103431.1 RefSeq gene 477887 478954 . + . ID=gene-NYQ15_RS02670;Name=NYQ15_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02670 NZ_CP103431.1 Protein Homology CDS 477887 478954 . + 0 ID=cds-WP_005771147.1;Parent=gene-NYQ15_RS02670;Dbxref=GenBank:WP_005771147.1;Name=WP_005771147.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819565.1;locus_tag=NYQ15_RS02670;product=MraY family glycosyltransferase;protein_id=WP_005771147.1;transl_table=11 NZ_CP103431.1 RefSeq gene 479077 480273 . - . ID=gene-NYQ15_RS02675;Name=NYQ15_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02675 NZ_CP103431.1 Protein Homology CDS 479077 480273 . - 0 ID=cds-WP_005772824.1;Parent=gene-NYQ15_RS02675;Dbxref=GenBank:WP_005772824.1;Name=WP_005772824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819566.1;locus_tag=NYQ15_RS02675;product=CBU_0534 family Dot/Icm T4SS effector;protein_id=WP_005772824.1;transl_table=11 NZ_CP103431.1 RefSeq gene 480451 481422 . + . ID=gene-NYQ15_RS02680;Name=NYQ15_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02680 NZ_CP103431.1 Protein Homology CDS 480451 481422 . + 0 ID=cds-WP_259431038.1;Parent=gene-NYQ15_RS02680;Dbxref=GenBank:WP_259431038.1;Name=WP_259431038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819567.1;locus_tag=NYQ15_RS02680;product=SPOR domain-containing protein;protein_id=WP_259431038.1;transl_table=11 NZ_CP103431.1 RefSeq gene 481456 481578 . - . ID=gene-NYQ15_RS02685;Name=NYQ15_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02685 NZ_CP103431.1 Protein Homology CDS 481456 481578 . - 0 ID=cds-WP_005771144.1;Parent=gene-NYQ15_RS02685;Dbxref=GenBank:WP_005771144.1;Name=WP_005771144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819568.1;locus_tag=NYQ15_RS02685;product=hypothetical protein;protein_id=WP_005771144.1;transl_table=11 NZ_CP103431.1 RefSeq gene 482106 483713 . + . ID=gene-NYQ15_RS02695;Name=NYQ15_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02695 NZ_CP103431.1 Protein Homology CDS 482106 483713 . + 0 ID=cds-WP_259431039.1;Parent=gene-NYQ15_RS02695;Dbxref=GenBank:WP_259431039.1;Name=WP_259431039.1;Ontology_term=GO:0015833,GO:0015333,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptide:proton symporter activity|0015333||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819571.2;locus_tag=NYQ15_RS02695;product=oligopeptide:H+ symporter;protein_id=WP_259431039.1;transl_table=11 NZ_CP103431.1 RefSeq gene 483892 487401 . + . ID=gene-NYQ15_RS02700;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=NYQ15_RS02700 NZ_CP103431.1 Protein Homology CDS 483892 487401 . + 0 ID=cds-WP_098953173.1;Parent=gene-NYQ15_RS02700;Dbxref=GenBank:WP_098953173.1;Name=WP_098953173.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819572.1;locus_tag=NYQ15_RS02700;product=chromosome segregation protein SMC;protein_id=WP_098953173.1;transl_table=11 NZ_CP103431.1 RefSeq gene 487456 488148 . + . ID=gene-NYQ15_RS02705;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=NYQ15_RS02705 NZ_CP103431.1 Protein Homology CDS 487456 488148 . + 0 ID=cds-WP_010957647.1;Parent=gene-NYQ15_RS02705;Dbxref=GenBank:WP_010957647.1;Name=WP_010957647.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819573.2;locus_tag=NYQ15_RS02705;product=cell division protein ZipA;protein_id=WP_010957647.1;transl_table=11 NZ_CP103431.1 RefSeq gene 488149 490170 . + . ID=gene-NYQ15_RS02710;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=NYQ15_RS02710 NZ_CP103431.1 Protein Homology CDS 488149 490170 . + 0 ID=cds-WP_259431040.1;Parent=gene-NYQ15_RS02710;Dbxref=GenBank:WP_259431040.1;Name=WP_259431040.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819574.2;locus_tag=NYQ15_RS02710;product=NAD-dependent DNA ligase LigA;protein_id=WP_259431040.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 490401 493255 . + . ID=gene-NYQ15_RS02715;Name=NYQ15_RS02715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS02715;pseudo=true NZ_CP103431.1 Protein Homology CDS 490401 493255 . + 0 ID=cds-NYQ15_RS02715;Parent=gene-NYQ15_RS02715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819575.1;locus_tag=NYQ15_RS02715;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 493501 493780 . + . ID=gene-NYQ15_RS02720;Name=NYQ15_RS02720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS02720;pseudo=true NZ_CP103431.1 Protein Homology CDS 493501 493780 . + 0 ID=cds-NYQ15_RS02720;Parent=gene-NYQ15_RS02720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819576.1;locus_tag=NYQ15_RS02720;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 493839 494486 . + . ID=gene-NYQ15_RS02725;Name=NYQ15_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02725 NZ_CP103431.1 Protein Homology CDS 493839 494486 . + 0 ID=cds-WP_010957651.1;Parent=gene-NYQ15_RS02725;Dbxref=GenBank:WP_010957651.1;Name=WP_010957651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819577.2;locus_tag=NYQ15_RS02725;product=LemA family protein;protein_id=WP_010957651.1;transl_table=11 NZ_CP103431.1 RefSeq gene 494496 495542 . + . ID=gene-NYQ15_RS02730;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=NYQ15_RS02730 NZ_CP103431.1 Protein Homology CDS 494496 495542 . + 0 ID=cds-WP_005771137.1;Parent=gene-NYQ15_RS02730;Dbxref=GenBank:WP_005771137.1;Name=WP_005771137.1;gbkey=CDS;gene=htpX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819578.1;locus_tag=NYQ15_RS02730;product=zinc metalloprotease HtpX;protein_id=WP_005771137.1;transl_table=11 NZ_CP103431.1 RefSeq gene 495583 497268 . - . ID=gene-NYQ15_RS02735;Name=NYQ15_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02735 NZ_CP103431.1 Protein Homology CDS 495583 497268 . - 0 ID=cds-WP_259431041.1;Parent=gene-NYQ15_RS02735;Dbxref=GenBank:WP_259431041.1;Name=WP_259431041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819579.1;locus_tag=NYQ15_RS02735;product=tetratricopeptide repeat protein;protein_id=WP_259431041.1;transl_table=11 NZ_CP103431.1 RefSeq gene 497249 498253 . - . ID=gene-NYQ15_RS02740;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=NYQ15_RS02740 NZ_CP103431.1 Protein Homology CDS 497249 498253 . - 0 ID=cds-WP_005771135.1;Parent=gene-NYQ15_RS02740;Dbxref=GenBank:WP_005771135.1;Name=WP_005771135.1;Ontology_term=GO:0009253,GO:0016757;gbkey=CDS;gene=mltB;go_function=glycosyltransferase activity|0016757||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819580.1;locus_tag=NYQ15_RS02740;product=lytic murein transglycosylase B;protein_id=WP_005771135.1;transl_table=11 NZ_CP103431.1 RefSeq gene 498333 499481 . - . ID=gene-NYQ15_RS02745;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=NYQ15_RS02745 NZ_CP103431.1 Protein Homology CDS 498333 499481 . - 0 ID=cds-WP_032075059.1;Parent=gene-NYQ15_RS02745;Dbxref=GenBank:WP_032075059.1;Name=WP_032075059.1;Ontology_term=GO:0008360,GO:0016020;gbkey=CDS;gene=rodA;go_component=membrane|0016020||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819581.2;locus_tag=NYQ15_RS02745;product=rod shape-determining protein RodA;protein_id=WP_032075059.1;transl_table=11 NZ_CP103431.1 RefSeq gene 499524 501371 . - . ID=gene-NYQ15_RS02750;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=NYQ15_RS02750 NZ_CP103431.1 Protein Homology CDS 499524 501371 . - 0 ID=cds-WP_032075058.1;Parent=gene-NYQ15_RS02750;Dbxref=GenBank:WP_032075058.1;Name=WP_032075058.1;Ontology_term=GO:0009252,GO:0003824,GO:0008658,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=catalytic activity|0003824||IEA,penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819582.2;locus_tag=NYQ15_RS02750;product=penicillin-binding protein 2;protein_id=WP_032075058.1;transl_table=11 NZ_CP103431.1 RefSeq gene 501391 501858 . - . ID=gene-NYQ15_RS02755;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=NYQ15_RS02755 NZ_CP103431.1 Protein Homology CDS 501391 501858 . - 0 ID=cds-WP_259431042.1;Parent=gene-NYQ15_RS02755;Dbxref=GenBank:WP_259431042.1;Name=WP_259431042.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771131.1;locus_tag=NYQ15_RS02755;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_259431042.1;transl_table=11 NZ_CP103431.1 RefSeq gene 501860 502198 . - . ID=gene-NYQ15_RS02760;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=NYQ15_RS02760 NZ_CP103431.1 Protein Homology CDS 501860 502198 . - 0 ID=cds-WP_005771129.1;Parent=gene-NYQ15_RS02760;Dbxref=GenBank:WP_005771129.1;Name=WP_005771129.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771129.1;locus_tag=NYQ15_RS02760;product=ribosome silencing factor;protein_id=WP_005771129.1;transl_table=11 NZ_CP103431.1 RefSeq gene 503781 503984 . - . ID=gene-NYQ15_RS02765;Name=NYQ15_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02765 NZ_CP103431.1 Protein Homology CDS 503781 503984 . - 0 ID=cds-WP_005771124.1;Parent=gene-NYQ15_RS02765;Dbxref=GenBank:WP_005771124.1;Name=WP_005771124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819586.1;locus_tag=NYQ15_RS02765;product=hypothetical protein;protein_id=WP_005771124.1;transl_table=11 NZ_CP103431.1 RefSeq gene 504190 504858 . - . ID=gene-NYQ15_RS02770;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=NYQ15_RS02770 NZ_CP103431.1 Protein Homology CDS 504190 504858 . - 0 ID=cds-WP_011997124.1;Parent=gene-NYQ15_RS02770;Dbxref=GenBank:WP_011997124.1;Name=WP_011997124.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819587.2;locus_tag=NYQ15_RS02770;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_011997124.1;transl_table=11 NZ_CP103431.1 RefSeq gene 504839 505858 . - . ID=gene-NYQ15_RS02775;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=NYQ15_RS02775 NZ_CP103431.1 Protein Homology CDS 504839 505858 . - 0 ID=cds-WP_005771120.1;Parent=gene-NYQ15_RS02775;Dbxref=GenBank:WP_005771120.1;Name=WP_005771120.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819588.1;locus_tag=NYQ15_RS02775;product=DNA polymerase III subunit delta;protein_id=WP_005771120.1;transl_table=11 NZ_CP103431.1 RefSeq gene 505861 506394 . - . ID=gene-NYQ15_RS02780;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=NYQ15_RS02780 NZ_CP103431.1 Protein Homology CDS 505861 506394 . - 0 ID=cds-WP_012570807.1;Parent=gene-NYQ15_RS02780;Dbxref=GenBank:WP_012570807.1;Name=WP_012570807.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570807.1;locus_tag=NYQ15_RS02780;product=LPS assembly lipoprotein LptE;protein_id=WP_012570807.1;transl_table=11 NZ_CP103431.1 RefSeq gene 506402 508864 . - . ID=gene-NYQ15_RS02785;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=NYQ15_RS02785 NZ_CP103431.1 Protein Homology CDS 506402 508864 . - 0 ID=cds-WP_005771117.1;Parent=gene-NYQ15_RS02785;Dbxref=GenBank:WP_005771117.1;Name=WP_005771117.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819590.1;locus_tag=NYQ15_RS02785;product=leucine--tRNA ligase;protein_id=WP_005771117.1;transl_table=11 NZ_CP103431.1 RefSeq gene 509004 510236 . + . ID=gene-NYQ15_RS02790;Name=NYQ15_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02790 NZ_CP103431.1 Protein Homology CDS 509004 510236 . + 0 ID=cds-WP_005772601.1;Parent=gene-NYQ15_RS02790;Dbxref=GenBank:WP_005772601.1;Name=WP_005772601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819591.1;locus_tag=NYQ15_RS02790;product=helicase/relaxase domain-containing protein;protein_id=WP_005772601.1;transl_table=11 NZ_CP103431.1 RefSeq gene 510243 510986 . - . ID=gene-NYQ15_RS02795;Name=NYQ15_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02795 NZ_CP103431.1 Protein Homology CDS 510243 510986 . - 0 ID=cds-WP_080744726.1;Parent=gene-NYQ15_RS02795;Dbxref=GenBank:WP_080744726.1;Name=WP_080744726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997120.1;locus_tag=NYQ15_RS02795;product=phytochelatin synthase family protein;protein_id=WP_080744726.1;transl_table=11 NZ_CP103431.1 RefSeq gene 511128 512408 . - . ID=gene-NYQ15_RS02800;Name=NYQ15_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02800 NZ_CP103431.1 Protein Homology CDS 511128 512408 . - 0 ID=cds-WP_005771113.1;Parent=gene-NYQ15_RS02800;Dbxref=GenBank:WP_005771113.1;Name=WP_005771113.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819592.1;locus_tag=NYQ15_RS02800;product=ATP-binding protein;protein_id=WP_005771113.1;transl_table=11 NZ_CP103431.1 RefSeq gene 513310 514767 . - . ID=gene-NYQ15_RS02805;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=NYQ15_RS02805 NZ_CP103431.1 Protein Homology CDS 513310 514767 . - 0 ID=cds-WP_005772596.1;Parent=gene-NYQ15_RS02805;Dbxref=GenBank:WP_005772596.1;Name=WP_005772596.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819594.1;locus_tag=NYQ15_RS02805;product=apolipoprotein N-acyltransferase;protein_id=WP_005772596.1;transl_table=11 NZ_CP103431.1 RefSeq gene 514760 515611 . - . ID=gene-NYQ15_RS02810;Name=NYQ15_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02810 NZ_CP103431.1 Protein Homology CDS 514760 515611 . - 0 ID=cds-WP_012570805.1;Parent=gene-NYQ15_RS02810;Dbxref=GenBank:WP_012570805.1;Name=WP_012570805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819595.2;locus_tag=NYQ15_RS02810;product=HlyC/CorC family transporter;protein_id=WP_012570805.1;transl_table=11 NZ_CP103431.1 RefSeq gene 515654 516919 . - . ID=gene-NYQ15_RS02815;Name=NYQ15_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02815 NZ_CP103431.1 Protein Homology CDS 515654 516919 . - 0 ID=cds-WP_098953135.1;Parent=gene-NYQ15_RS02815;Dbxref=GenBank:WP_098953135.1;Name=WP_098953135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819596.1;locus_tag=NYQ15_RS02815;product=MFS transporter;protein_id=WP_098953135.1;transl_table=11 NZ_CP103431.1 RefSeq gene 516975 517433 . - . ID=gene-NYQ15_RS02820;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=NYQ15_RS02820 NZ_CP103431.1 Protein Homology CDS 516975 517433 . - 0 ID=cds-WP_005771102.1;Parent=gene-NYQ15_RS02820;Dbxref=GenBank:WP_005771102.1;Name=WP_005771102.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819597.1;locus_tag=NYQ15_RS02820;product=rRNA maturation RNase YbeY;protein_id=WP_005771102.1;transl_table=11 NZ_CP103431.1 RefSeq gene 517430 518401 . - . ID=gene-NYQ15_RS02825;Name=NYQ15_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02825 NZ_CP103431.1 Protein Homology CDS 517430 518401 . - 0 ID=cds-WP_005771100.1;Parent=gene-NYQ15_RS02825;Dbxref=GenBank:WP_005771100.1;Name=WP_005771100.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819598.1;locus_tag=NYQ15_RS02825;product=PhoH family protein;protein_id=WP_005771100.1;transl_table=11 NZ_CP103431.1 RefSeq gene 518412 519731 . - . ID=gene-NYQ15_RS02830;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=NYQ15_RS02830 NZ_CP103431.1 Protein Homology CDS 518412 519731 . - 0 ID=cds-WP_005771098.1;Parent=gene-NYQ15_RS02830;Dbxref=GenBank:WP_005771098.1;Name=WP_005771098.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819599.1;locus_tag=NYQ15_RS02830;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_005771098.1;transl_table=11 NZ_CP103431.1 RefSeq gene 519752 521434 . - . ID=gene-NYQ15_RS02835;Name=NYQ15_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02835 NZ_CP103431.1 Protein Homology CDS 519752 521434 . - 0 ID=cds-WP_005771096.1;Parent=gene-NYQ15_RS02835;Dbxref=GenBank:WP_005771096.1;Name=WP_005771096.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819600.1;locus_tag=NYQ15_RS02835;product=APC family permease;protein_id=WP_005771096.1;transl_table=11 NZ_CP103431.1 RefSeq gene 521649 522074 . - . ID=gene-NYQ15_RS02840;Name=NYQ15_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02840 NZ_CP103431.1 Protein Homology CDS 521649 522074 . - 0 ID=cds-WP_005771094.1;Parent=gene-NYQ15_RS02840;Dbxref=GenBank:WP_005771094.1;Name=WP_005771094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997113.1;locus_tag=NYQ15_RS02840;product=hypothetical protein;protein_id=WP_005771094.1;transl_table=11 NZ_CP103431.1 RefSeq gene 522396 523772 . + . ID=gene-NYQ15_RS02845;Name=NYQ15_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02845 NZ_CP103431.1 Protein Homology CDS 522396 523772 . + 0 ID=cds-WP_032075050.1;Parent=gene-NYQ15_RS02845;Dbxref=GenBank:WP_032075050.1;Name=WP_032075050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819602.1;locus_tag=NYQ15_RS02845;product=M17 family metallopeptidase;protein_id=WP_032075050.1;transl_table=11 NZ_CP103431.1 RefSeq gene 523782 525929 . + . ID=gene-NYQ15_RS02850;Name=NYQ15_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02850 NZ_CP103431.1 Protein Homology CDS 523782 525929 . + 0 ID=cds-WP_005771090.1;Parent=gene-NYQ15_RS02850;Dbxref=GenBank:WP_005771090.1;Name=WP_005771090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819603.1;locus_tag=NYQ15_RS02850;product=acyl-CoA dehydrogenase;protein_id=WP_005771090.1;transl_table=11 NZ_CP103431.1 RefSeq gene 526473 527768 . + . ID=gene-NYQ15_RS02855;Name=NYQ15_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02855 NZ_CP103431.1 Protein Homology CDS 526473 527768 . + 0 ID=cds-WP_005772592.1;Parent=gene-NYQ15_RS02855;Dbxref=GenBank:WP_005772592.1;Name=WP_005772592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819604.1;locus_tag=NYQ15_RS02855;product=acetyl-CoA C-acetyltransferase;protein_id=WP_005772592.1;transl_table=11 NZ_CP103431.1 RefSeq gene 527819 529870 . + . ID=gene-NYQ15_RS02860;Name=NYQ15_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02860 NZ_CP103431.1 Protein Homology CDS 527819 529870 . + 0 ID=cds-WP_259431043.1;Parent=gene-NYQ15_RS02860;Dbxref=GenBank:WP_259431043.1;Name=WP_259431043.1;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819606.2;locus_tag=NYQ15_RS02860;product=3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein;protein_id=WP_259431043.1;transl_table=11 NZ_CP103431.1 RefSeq gene 529858 530634 . + . ID=gene-NYQ15_RS02865;Name=NYQ15_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02865 NZ_CP103431.1 Protein Homology CDS 529858 530634 . + 0 ID=cds-WP_039669454.1;Parent=gene-NYQ15_RS02865;Dbxref=GenBank:WP_039669454.1;Name=WP_039669454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819607.2;locus_tag=NYQ15_RS02865;product=hypothetical protein;protein_id=WP_039669454.1;transl_table=11 NZ_CP103431.1 RefSeq gene 530647 531621 . - . ID=gene-NYQ15_RS02870;Name=NYQ15_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02870 NZ_CP103431.1 Protein Homology CDS 530647 531621 . - 0 ID=cds-WP_005771078.1;Parent=gene-NYQ15_RS02870;Dbxref=GenBank:WP_005771078.1;Name=WP_005771078.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819608.1;locus_tag=NYQ15_RS02870;product=glycosyltransferase family 2 protein;protein_id=WP_005771078.1;transl_table=11 NZ_CP103431.1 RefSeq gene 531608 533101 . - . ID=gene-NYQ15_RS02875;Name=NYQ15_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02875 NZ_CP103431.1 Protein Homology CDS 531608 533101 . - 0 ID=cds-WP_005771076.1;Parent=gene-NYQ15_RS02875;Dbxref=GenBank:WP_005771076.1;Name=WP_005771076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819609.1;locus_tag=NYQ15_RS02875;product=glycosyltransferase family 39 protein;protein_id=WP_005771076.1;transl_table=11 NZ_CP103431.1 RefSeq gene 533226 534047 . + . ID=gene-NYQ15_RS02880;Name=NYQ15_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02880 NZ_CP103431.1 Protein Homology CDS 533226 534047 . + 0 ID=cds-WP_005771074.1;Parent=gene-NYQ15_RS02880;Dbxref=GenBank:WP_005771074.1;Name=WP_005771074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819610.1;locus_tag=NYQ15_RS02880;product=ChbG/HpnK family deacetylase;protein_id=WP_005771074.1;transl_table=11 NZ_CP103431.1 RefSeq gene 534017 534352 . - . ID=gene-NYQ15_RS02885;Name=fdxA;gbkey=Gene;gene=fdxA;gene_biotype=protein_coding;locus_tag=NYQ15_RS02885 NZ_CP103431.1 Protein Homology CDS 534017 534352 . - 0 ID=cds-WP_005771072.1;Parent=gene-NYQ15_RS02885;Dbxref=GenBank:WP_005771072.1;Name=WP_005771072.1;Ontology_term=GO:0009055,GO:0051539;gbkey=CDS;gene=fdxA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819611.1;locus_tag=NYQ15_RS02885;product=ferredoxin FdxA;protein_id=WP_005771072.1;transl_table=11 NZ_CP103431.1 RefSeq gene 534425 534664 . + . ID=gene-NYQ15_RS02890;Name=NYQ15_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02890 NZ_CP103431.1 Protein Homology CDS 534425 534664 . + 0 ID=cds-WP_005771070.1;Parent=gene-NYQ15_RS02890;Dbxref=GenBank:WP_005771070.1;Name=WP_005771070.1;Ontology_term=GO:0051537,GO:1990229;gbkey=CDS;go_component=iron-sulfur cluster assembly complex|1990229||IEA;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819612.1;locus_tag=NYQ15_RS02890;product=BolA family protein;protein_id=WP_005771070.1;transl_table=11 NZ_CP103431.1 RefSeq gene 534667 534966 . + . ID=gene-NYQ15_RS02895;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=NYQ15_RS02895 NZ_CP103431.1 Protein Homology CDS 534667 534966 . + 0 ID=cds-WP_005771068.1;Parent=gene-NYQ15_RS02895;Dbxref=GenBank:WP_005771068.1;Name=WP_005771068.1;Ontology_term=GO:0009055;gbkey=CDS;gene=grxD;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819613.1;locus_tag=NYQ15_RS02895;product=Grx4 family monothiol glutaredoxin;protein_id=WP_005771068.1;transl_table=11 NZ_CP103431.1 RefSeq gene 535163 535480 . + . ID=gene-NYQ15_RS02900;Name=NYQ15_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02900 NZ_CP103431.1 Protein Homology CDS 535163 535480 . + 0 ID=cds-WP_011997104.1;Parent=gene-NYQ15_RS02900;Dbxref=GenBank:WP_011997104.1;Name=WP_011997104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819614.1;locus_tag=NYQ15_RS02900;product=hypothetical protein;protein_id=WP_011997104.1;transl_table=11 NZ_CP103431.1 RefSeq gene 535523 535726 . - . ID=gene-NYQ15_RS02905;Name=NYQ15_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02905 NZ_CP103431.1 Protein Homology CDS 535523 535726 . - 0 ID=cds-WP_005771061.1;Parent=gene-NYQ15_RS02905;Dbxref=GenBank:WP_005771061.1;Name=WP_005771061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819615.1;locus_tag=NYQ15_RS02905;product=CBU_0585 family protein;protein_id=WP_005771061.1;transl_table=11 NZ_CP103431.1 RefSeq gene 535778 539293 . + . ID=gene-NYQ15_RS02910;Name=NYQ15_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02910 NZ_CP103431.1 Protein Homology CDS 535778 539293 . + 0 ID=cds-WP_032075048.1;Parent=gene-NYQ15_RS02910;Dbxref=GenBank:WP_032075048.1;Name=WP_032075048.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819616.1;locus_tag=NYQ15_RS02910;product=FAD-dependent oxidoreductase;protein_id=WP_032075048.1;transl_table=11 NZ_CP103431.1 RefSeq gene 539338 539661 . + . ID=gene-NYQ15_RS02915;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=NYQ15_RS02915 NZ_CP103431.1 Protein Homology CDS 539338 539661 . + 0 ID=cds-WP_010957677.1;Parent=gene-NYQ15_RS02915;Dbxref=GenBank:WP_010957677.1;Name=WP_010957677.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819617.1;locus_tag=NYQ15_RS02915;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_010957677.1;transl_table=11 NZ_CP103431.1 RefSeq gene 539742 540737 . + . ID=gene-NYQ15_RS02920;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=NYQ15_RS02920 NZ_CP103431.1 Protein Homology CDS 539742 540737 . + 0 ID=cds-WP_005772849.1;Parent=gene-NYQ15_RS02920;Dbxref=GenBank:WP_005772849.1;Name=WP_005772849.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819618.1;locus_tag=NYQ15_RS02920;product=quinolinate synthase NadA;protein_id=WP_005772849.1;transl_table=11 NZ_CP103431.1 RefSeq gene 540734 541132 . + . ID=gene-NYQ15_RS02925;Name=NYQ15_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02925 NZ_CP103431.1 Protein Homology CDS 540734 541132 . + 0 ID=cds-WP_005771057.1;Parent=gene-NYQ15_RS02925;Dbxref=GenBank:WP_005771057.1;Name=WP_005771057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819619.1;locus_tag=NYQ15_RS02925;product=ferredoxin;protein_id=WP_005771057.1;transl_table=11 NZ_CP103431.1 RefSeq gene 541129 541302 . + . ID=gene-NYQ15_RS02930;Name=NYQ15_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02930 NZ_CP103431.1 Protein Homology CDS 541129 541302 . + 0 ID=cds-WP_005771056.1;Parent=gene-NYQ15_RS02930;Dbxref=GenBank:WP_005771056.1;Name=WP_005771056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771056.1;locus_tag=NYQ15_RS02930;product=CBU_0590 family Dot/Icm T4SS effector;protein_id=WP_005771056.1;transl_table=11 NZ_CP103431.1 RefSeq gene 541309 542133 . + . ID=gene-NYQ15_RS02935;Name=NYQ15_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02935 NZ_CP103431.1 Protein Homology CDS 541309 542133 . + 0 ID=cds-WP_005771055.1;Parent=gene-NYQ15_RS02935;Dbxref=GenBank:WP_005771055.1;Name=WP_005771055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819621.1;locus_tag=NYQ15_RS02935;product=DUF2797 domain-containing protein;protein_id=WP_005771055.1;transl_table=11 NZ_CP103431.1 RefSeq gene 542135 542452 . + . ID=gene-NYQ15_RS02940;Name=NYQ15_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02940 NZ_CP103431.1 Protein Homology CDS 542135 542452 . + 0 ID=cds-WP_012570799.1;Parent=gene-NYQ15_RS02940;Dbxref=GenBank:WP_012570799.1;Name=WP_012570799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819622.2;locus_tag=NYQ15_RS02940;product=CBU_0592 family membrane protein;protein_id=WP_012570799.1;transl_table=11 NZ_CP103431.1 RefSeq gene 542426 542845 . - . ID=gene-NYQ15_RS02945;Name=NYQ15_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02945 NZ_CP103431.1 Protein Homology CDS 542426 542845 . - 0 ID=cds-WP_158302293.1;Parent=gene-NYQ15_RS02945;Dbxref=GenBank:WP_158302293.1;Name=WP_158302293.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014566.5;locus_tag=NYQ15_RS02945;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_158302293.1;transl_table=11 NZ_CP103431.1 RefSeq gene 542857 543288 . - . ID=gene-NYQ15_RS02950;Name=NYQ15_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02950 NZ_CP103431.1 GeneMarkS-2+ CDS 542857 543288 . - 0 ID=cds-WP_259423807.1;Parent=gene-NYQ15_RS02950;Dbxref=GenBank:WP_259423807.1;Name=WP_259423807.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS02950;product=hypothetical protein;protein_id=WP_259423807.1;transl_table=11 NZ_CP103431.1 RefSeq gene 543316 543567 . - . ID=gene-NYQ15_RS02955;Name=NYQ15_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02955 NZ_CP103431.1 GeneMarkS-2+ CDS 543316 543567 . - 0 ID=cds-WP_259431044.1;Parent=gene-NYQ15_RS02955;Dbxref=GenBank:WP_259431044.1;Name=WP_259431044.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS02955;product=hypothetical protein;protein_id=WP_259431044.1;transl_table=11 NZ_CP103431.1 RefSeq gene 543570 544319 . - . ID=gene-NYQ15_RS02960;Name=NYQ15_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02960 NZ_CP103431.1 Protein Homology CDS 543570 544319 . - 0 ID=cds-WP_010957681.1;Parent=gene-NYQ15_RS02960;Dbxref=GenBank:WP_010957681.1;Name=WP_010957681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819626.1;locus_tag=NYQ15_RS02960;product=MBL fold metallo-hydrolase;protein_id=WP_010957681.1;transl_table=11 NZ_CP103431.1 RefSeq gene 544576 544815 . + . ID=gene-NYQ15_RS02970;Name=NYQ15_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02970 NZ_CP103431.1 Protein Homology CDS 544576 544815 . + 0 ID=cds-WP_012570241.1;Parent=gene-NYQ15_RS02970;Dbxref=GenBank:WP_012570241.1;Name=WP_012570241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332973.1;locus_tag=NYQ15_RS02970;product=hypothetical protein;protein_id=WP_012570241.1;transl_table=11 NZ_CP103431.1 RefSeq gene 544933 546060 . - . ID=gene-NYQ15_RS02975;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=NYQ15_RS02975 NZ_CP103431.1 Protein Homology CDS 544933 546060 . - 0 ID=cds-WP_005772850.1;Parent=gene-NYQ15_RS02975;Dbxref=GenBank:WP_005772850.1;Name=WP_005772850.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819627.1;locus_tag=NYQ15_RS02975;product=radical SAM family heme chaperone HemW;protein_id=WP_005772850.1;transl_table=11 NZ_CP103431.1 RefSeq gene 546113 546676 . + . ID=gene-NYQ15_RS02980;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=NYQ15_RS02980 NZ_CP103431.1 Protein Homology CDS 546113 546676 . + 0 ID=cds-WP_011997099.1;Parent=gene-NYQ15_RS02980;Dbxref=GenBank:WP_011997099.1;Name=WP_011997099.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819628.2;locus_tag=NYQ15_RS02980;product=ADP compounds hydrolase NudE;protein_id=WP_011997099.1;transl_table=11 NZ_CP103431.1 RefSeq gene 546666 547481 . + . ID=gene-NYQ15_RS02985;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=NYQ15_RS02985 NZ_CP103431.1 Protein Homology CDS 546666 547481 . + 0 ID=cds-WP_005771047.1;Parent=gene-NYQ15_RS02985;Dbxref=GenBank:WP_005771047.1;Name=WP_005771047.1;Ontology_term=GO:0006790,GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819629.1;locus_tag=NYQ15_RS02985;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_005771047.1;transl_table=11 NZ_CP103431.1 RefSeq gene 547674 548951 . + . ID=gene-NYQ15_RS02990;Name=NYQ15_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02990 NZ_CP103431.1 GeneMarkS-2+ CDS 547674 548951 . + 0 ID=cds-WP_259431045.1;Parent=gene-NYQ15_RS02990;Dbxref=GenBank:WP_259431045.1;Name=WP_259431045.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS02990;product=hypothetical protein;protein_id=WP_259431045.1;transl_table=11 NZ_CP103431.1 RefSeq gene 549097 549273 . + . ID=gene-NYQ15_RS02995;Name=NYQ15_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS02995 NZ_CP103431.1 GeneMarkS-2+ CDS 549097 549273 . + 0 ID=cds-WP_259431046.1;Parent=gene-NYQ15_RS02995;Dbxref=GenBank:WP_259431046.1;Name=WP_259431046.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS02995;product=hypothetical protein;protein_id=WP_259431046.1;transl_table=11 NZ_CP103431.1 RefSeq gene 550005 550712 . - . ID=gene-NYQ15_RS03000;Name=NYQ15_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03000 NZ_CP103431.1 GeneMarkS-2+ CDS 550005 550712 . - 0 ID=cds-WP_259411765.1;Parent=gene-NYQ15_RS03000;Dbxref=GenBank:WP_259411765.1;Name=WP_259411765.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS03000;product=hypothetical protein;protein_id=WP_259411765.1;transl_table=11 NZ_CP103431.1 RefSeq gene 550861 552033 . + . ID=gene-NYQ15_RS03005;Name=NYQ15_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03005 NZ_CP103431.1 Protein Homology CDS 550861 552033 . + 0 ID=cds-WP_259431047.1;Parent=gene-NYQ15_RS03005;Dbxref=GenBank:WP_259431047.1;Name=WP_259431047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996655.1;locus_tag=NYQ15_RS03005;product=CBUD_0618 family Dot/Icm T4SS effector;protein_id=WP_259431047.1;transl_table=11 NZ_CP103431.1 RefSeq gene 552176 553687 . - . ID=gene-NYQ15_RS03010;Name=mvaD;gbkey=Gene;gene=mvaD;gene_biotype=protein_coding;locus_tag=NYQ15_RS03010 NZ_CP103431.1 Protein Homology CDS 552176 553687 . - 0 ID=cds-WP_005772541.1;Parent=gene-NYQ15_RS03010;Dbxref=GenBank:WP_005772541.1;Name=WP_005772541.1;Ontology_term=GO:0019287,GO:0004163,GO:0005829;gbkey=CDS;gene=mvaD;go_component=cytosol|0005829||IEA;go_function=diphosphomevalonate decarboxylase activity|0004163||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819637.1;locus_tag=NYQ15_RS03010;product=diphosphomevalonate decarboxylase;protein_id=WP_005772541.1;transl_table=11 NZ_CP103431.1 RefSeq gene 553680 554621 . - . ID=gene-NYQ15_RS03015;Name=mvk;gbkey=Gene;gene=mvk;gene_biotype=protein_coding;locus_tag=NYQ15_RS03015 NZ_CP103431.1 Protein Homology CDS 553680 554621 . - 0 ID=cds-WP_005772552.1;Parent=gene-NYQ15_RS03015;Dbxref=GenBank:WP_005772552.1;Name=WP_005772552.1;Ontology_term=GO:0016126,GO:0019287,GO:0004496,GO:0005524,GO:0005737;gbkey=CDS;gene=mvk;go_component=cytoplasm|0005737||IEA;go_function=mevalonate kinase activity|0004496||IEA,ATP binding|0005524||IEA;go_process=sterol biosynthetic process|0016126||IEA,isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819638.1;locus_tag=NYQ15_RS03015;product=mevalonate kinase;protein_id=WP_005772552.1;transl_table=11 NZ_CP103431.1 RefSeq gene 554720 555742 . - . ID=gene-NYQ15_RS03020;Name=mvk;gbkey=Gene;gene=mvk;gene_biotype=protein_coding;locus_tag=NYQ15_RS03020 NZ_CP103431.1 Protein Homology CDS 554720 555742 . - 0 ID=cds-WP_005771666.1;Parent=gene-NYQ15_RS03020;Dbxref=GenBank:WP_005771666.1;Name=WP_005771666.1;Ontology_term=GO:0016126,GO:0019287,GO:0004496,GO:0005524,GO:0005737;gbkey=CDS;gene=mvk;go_component=cytoplasm|0005737||IEA;go_function=mevalonate kinase activity|0004496||IEA,ATP binding|0005524||IEA;go_process=sterol biosynthetic process|0016126||IEA,isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819639.1;locus_tag=NYQ15_RS03020;product=mevalonate kinase;protein_id=WP_005771666.1;transl_table=11 NZ_CP103431.1 RefSeq gene 555739 556812 . - . ID=gene-NYQ15_RS03025;Name=NYQ15_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03025 NZ_CP103431.1 Protein Homology CDS 555739 556812 . - 0 ID=cds-WP_010957686.1;Parent=gene-NYQ15_RS03025;Dbxref=GenBank:WP_010957686.1;Name=WP_010957686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819640.1;locus_tag=NYQ15_RS03025;product=hydroxymethylglutaryl-CoA reductase (NADPH);protein_id=WP_010957686.1;transl_table=11 NZ_CP103431.1 RefSeq gene 557004 559403 . + . ID=gene-NYQ15_RS03030;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=NYQ15_RS03030 NZ_CP103431.1 Protein Homology CDS 557004 559403 . + 0 ID=cds-WP_273700652.1;Parent=gene-NYQ15_RS03030;Dbxref=GenBank:WP_273700652.1;Name=WP_273700652.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017252732.1;locus_tag=NYQ15_RS03030;product=outer membrane protein assembly factor BamA;protein_id=WP_273700652.1;transl_table=11 NZ_CP103431.1 RefSeq gene 559481 559978 . + . ID=gene-NYQ15_RS03035;Name=NYQ15_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03035 NZ_CP103431.1 Protein Homology CDS 559481 559978 . + 0 ID=cds-WP_032075095.1;Parent=gene-NYQ15_RS03035;Dbxref=GenBank:WP_032075095.1;Name=WP_032075095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819642.1;locus_tag=NYQ15_RS03035;product=OmpH family outer membrane protein;protein_id=WP_032075095.1;transl_table=11 NZ_CP103431.1 RefSeq gene 559988 561016 . + . ID=gene-NYQ15_RS03040;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=NYQ15_RS03040 NZ_CP103431.1 Protein Homology CDS 559988 561016 . + 0 ID=cds-WP_005771660.1;Parent=gene-NYQ15_RS03040;Dbxref=GenBank:WP_005771660.1;Name=WP_005771660.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819643.1;locus_tag=NYQ15_RS03040;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_005771660.1;transl_table=11 NZ_CP103431.1 RefSeq gene 561013 561450 . + . ID=gene-NYQ15_RS03045;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=NYQ15_RS03045 NZ_CP103431.1 Protein Homology CDS 561013 561450 . + 0 ID=cds-WP_010957689.1;Parent=gene-NYQ15_RS03045;Dbxref=GenBank:WP_010957689.1;Name=WP_010957689.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819644.1;locus_tag=NYQ15_RS03045;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_010957689.1;transl_table=11 NZ_CP103431.1 RefSeq gene 561455 562234 . + . ID=gene-NYQ15_RS03050;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=NYQ15_RS03050 NZ_CP103431.1 Protein Homology CDS 561455 562234 . + 0 ID=cds-WP_259431048.1;Parent=gene-NYQ15_RS03050;Dbxref=GenBank:WP_259431048.1;Name=WP_259431048.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819645.1;locus_tag=NYQ15_RS03050;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_259431048.1;transl_table=11 NZ_CP103431.1 RefSeq gene 562231 562821 . + . ID=gene-NYQ15_RS03055;Name=NYQ15_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03055 NZ_CP103431.1 Protein Homology CDS 562231 562821 . + 0 ID=cds-WP_012570827.1;Parent=gene-NYQ15_RS03055;Dbxref=GenBank:WP_012570827.1;Name=WP_012570827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819646.1;locus_tag=NYQ15_RS03055;product=YqeG family HAD IIIA-type phosphatase;protein_id=WP_012570827.1;transl_table=11 NZ_CP103431.1 RefSeq gene 562913 564430 . - . ID=gene-NYQ15_RS03060;Name=NYQ15_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03060 NZ_CP103431.1 Protein Homology CDS 562913 564430 . - 0 ID=cds-WP_080735207.1;Parent=gene-NYQ15_RS03060;Dbxref=GenBank:WP_080735207.1;Name=WP_080735207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819647.2;locus_tag=NYQ15_RS03060;product=hypothetical protein;protein_id=WP_080735207.1;transl_table=11 NZ_CP103431.1 RefSeq gene 564435 565526 . - . ID=gene-NYQ15_RS03065;Name=NYQ15_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03065 NZ_CP103431.1 Protein Homology CDS 564435 565526 . - 0 ID=cds-WP_259431049.1;Parent=gene-NYQ15_RS03065;Dbxref=GenBank:WP_259431049.1;Name=WP_259431049.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF013884.5;locus_tag=NYQ15_RS03065;product=acyltransferase;protein_id=WP_259431049.1;transl_table=11 NZ_CP103431.1 RefSeq gene 565585 566073 . - . ID=gene-NYQ15_RS03070;Name=NYQ15_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03070 NZ_CP103431.1 Protein Homology CDS 565585 566073 . - 0 ID=cds-WP_005772962.1;Parent=gene-NYQ15_RS03070;Dbxref=GenBank:WP_005772962.1;Name=WP_005772962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819649.1;locus_tag=NYQ15_RS03070;product=hypothetical protein;protein_id=WP_005772962.1;transl_table=11 NZ_CP103431.1 RefSeq gene 566230 567360 . - . ID=gene-NYQ15_RS03075;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=NYQ15_RS03075 NZ_CP103431.1 Protein Homology CDS 566230 567360 . - 0 ID=cds-WP_005771934.1;Parent=gene-NYQ15_RS03075;Dbxref=GenBank:WP_005771934.1;Name=WP_005771934.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819650.1;locus_tag=NYQ15_RS03075;product=lipid-A-disaccharide synthase;protein_id=WP_005771934.1;transl_table=11 NZ_CP103431.1 RefSeq gene 567350 568333 . - . ID=gene-NYQ15_RS03080;Name=NYQ15_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03080 NZ_CP103431.1 Protein Homology CDS 567350 568333 . - 0 ID=cds-WP_005771932.1;Parent=gene-NYQ15_RS03080;Dbxref=GenBank:WP_005771932.1;Name=WP_005771932.1;Ontology_term=GO:0016491,GO:0016651;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819651.1;locus_tag=NYQ15_RS03080;product=Gfo/Idh/MocA family protein;protein_id=WP_005771932.1;transl_table=11 NZ_CP103431.1 RefSeq gene 568525 568971 . + . ID=gene-NYQ15_RS03085;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=NYQ15_RS03085 NZ_CP103431.1 Protein Homology CDS 568525 568971 . + 0 ID=cds-WP_005771930.1;Parent=gene-NYQ15_RS03085;Dbxref=GenBank:WP_005771930.1;Name=WP_005771930.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819652.2;locus_tag=NYQ15_RS03085;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_005771930.1;transl_table=11 NZ_CP103431.1 RefSeq gene 568976 569098 . + . ID=gene-NYQ15_RS03090;Name=NYQ15_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03090 NZ_CP103431.1 Protein Homology CDS 568976 569098 . + 0 ID=cds-WP_098953143.1;Parent=gene-NYQ15_RS03090;Dbxref=GenBank:WP_098953143.1;Name=WP_098953143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819653.1;locus_tag=NYQ15_RS03090;product=hypothetical protein;protein_id=WP_098953143.1;transl_table=11 NZ_CP103431.1 RefSeq gene 569198 569332 . + . ID=gene-NYQ15_RS03095;Name=NYQ15_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03095 NZ_CP103431.1 Protein Homology CDS 569198 569332 . + 0 ID=cds-WP_011996663.1;Parent=gene-NYQ15_RS03095;Dbxref=GenBank:WP_011996663.1;Name=WP_011996663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819654.1;locus_tag=NYQ15_RS03095;product=hypothetical protein;protein_id=WP_011996663.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 569533 569931 . + . ID=gene-NYQ15_RS03100;Name=NYQ15_RS03100;end_range=569931,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS03100;partial=true;pseudo=true NZ_CP103431.1 Protein Homology CDS 569533 569931 . + 0 ID=cds-NYQ15_RS03100;Parent=gene-NYQ15_RS03100;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=569931,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819655.1;locus_tag=NYQ15_RS03100;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 570050 572138 . + . ID=gene-NYQ15_RS03105;Name=cetCb3;gbkey=Gene;gene=cetCb3;gene_biotype=pseudogene;locus_tag=NYQ15_RS03105;pseudo=true NZ_CP103431.1 Protein Homology CDS 570050 572138 . + 0 ID=cds-NYQ15_RS03105;Parent=gene-NYQ15_RS03105;Note=frameshifted;gbkey=CDS;gene=cetCb3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819656.1;locus_tag=NYQ15_RS03105;product=Dot/Icm T4SS effector CetCb3;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 572264 572386 . - . ID=gene-NYQ15_RS03110;Name=NYQ15_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03110 NZ_CP103431.1 Protein Homology CDS 572264 572386 . - 0 ID=cds-WP_010957699.1;Parent=gene-NYQ15_RS03110;Dbxref=GenBank:WP_010957699.1;Name=WP_010957699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819657.1;locus_tag=NYQ15_RS03110;product=hypothetical protein;protein_id=WP_010957699.1;transl_table=11 NZ_CP103431.1 RefSeq gene 572523 573050 . + . ID=gene-NYQ15_RS03115;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=NYQ15_RS03115 NZ_CP103431.1 Protein Homology CDS 572523 573050 . + 0 ID=cds-WP_005771925.1;Parent=gene-NYQ15_RS03115;Dbxref=GenBank:WP_005771925.1;Name=WP_005771925.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819658.1;locus_tag=NYQ15_RS03115;product=inorganic diphosphatase;protein_id=WP_005771925.1;transl_table=11 NZ_CP103431.1 RefSeq gene 573169 576309 . + . ID=gene-NYQ15_RS03120;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=NYQ15_RS03120 NZ_CP103431.1 Protein Homology CDS 573169 576309 . + 0 ID=cds-WP_259431050.1;Parent=gene-NYQ15_RS03120;Dbxref=GenBank:WP_259431050.1;Name=WP_259431050.1;Ontology_term=GO:0006355,GO:0010133,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline catabolic process to glutamate|0010133||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819659.1;locus_tag=NYQ15_RS03120;product=bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA;protein_id=WP_259431050.1;transl_table=11 NZ_CP103431.1 RefSeq gene 576382 577074 . + . ID=gene-NYQ15_RS03125;Name=NYQ15_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03125 NZ_CP103431.1 Protein Homology CDS 576382 577074 . + 0 ID=cds-WP_011996666.1;Parent=gene-NYQ15_RS03125;Dbxref=GenBank:WP_011996666.1;Name=WP_011996666.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819660.1;locus_tag=NYQ15_RS03125;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_011996666.1;transl_table=11 NZ_CP103431.1 RefSeq gene 577116 581090 . + . ID=gene-NYQ15_RS03130;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=NYQ15_RS03130 NZ_CP103431.1 Protein Homology CDS 577116 581090 . + 0 ID=cds-WP_259431051.1;Parent=gene-NYQ15_RS03130;Dbxref=GenBank:WP_259431051.1;Name=WP_259431051.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819661.2;locus_tag=NYQ15_RS03130;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_259431051.1;transl_table=11 NZ_CP103431.1 RefSeq gene 581150 581449 . - . ID=gene-NYQ15_RS03135;Name=NYQ15_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03135 NZ_CP103431.1 Protein Homology CDS 581150 581449 . - 0 ID=cds-WP_005771921.1;Parent=gene-NYQ15_RS03135;Dbxref=GenBank:WP_005771921.1;Name=WP_005771921.1;Ontology_term=GO:0004322,GO:0140737;gbkey=CDS;go_component=encapsulin nanocompartment|0140737||IEA;go_function=ferroxidase activity|0004322||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819662.1;locus_tag=NYQ15_RS03135;product=encapsulin-associated ferritin-like protein;protein_id=WP_005771921.1;transl_table=11 NZ_CP103431.1 RefSeq gene 581633 583525 . + . ID=gene-NYQ15_RS03140;Name=NYQ15_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03140 NZ_CP103431.1 Protein Homology CDS 581633 583525 . + 0 ID=cds-WP_098953146.1;Parent=gene-NYQ15_RS03140;Dbxref=GenBank:WP_098953146.1;Name=WP_098953146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819664.2;locus_tag=NYQ15_RS03140;product=PAS domain-containing protein;protein_id=WP_098953146.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 583544 585033 . + . ID=gene-NYQ15_RS03145;Name=NYQ15_RS03145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS03145;pseudo=true NZ_CP103431.1 Protein Homology CDS 583544 585033 . + 0 ID=cds-NYQ15_RS03145;Parent=gene-NYQ15_RS03145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819665.1;locus_tag=NYQ15_RS03145;product=CBU_0635 family Dot/Icm T4SS effector;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 585076 585969 . + . ID=gene-NYQ15_RS03150;Name=NYQ15_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03150 NZ_CP103431.1 Protein Homology CDS 585076 585969 . + 0 ID=cds-WP_005771917.1;Parent=gene-NYQ15_RS03150;Dbxref=GenBank:WP_005771917.1;Name=WP_005771917.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819666.1;locus_tag=NYQ15_RS03150;product=DMT family transporter;protein_id=WP_005771917.1;transl_table=11 NZ_CP103431.1 RefSeq gene 585988 586749 . - . ID=gene-NYQ15_RS03155;Name=NYQ15_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03155 NZ_CP103431.1 Protein Homology CDS 585988 586749 . - 0 ID=cds-WP_005772751.1;Parent=gene-NYQ15_RS03155;Dbxref=GenBank:WP_005772751.1;Name=WP_005772751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819667.1;locus_tag=NYQ15_RS03155;product=CBU_0637 family Dot/Icm type IV secretion system effector;protein_id=WP_005772751.1;transl_table=11 NZ_CP103431.1 RefSeq gene 587166 588302 . - . ID=gene-NYQ15_RS03160;Name=NYQ15_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03160 NZ_CP103431.1 Protein Homology CDS 587166 588302 . - 0 ID=cds-WP_005772748.1;Parent=gene-NYQ15_RS03160;Dbxref=GenBank:WP_005772748.1;Name=WP_005772748.1;Ontology_term=GO:0006096;gbkey=CDS;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819668.1;locus_tag=NYQ15_RS03160;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_005772748.1;transl_table=11 NZ_CP103431.1 RefSeq gene 588302 589282 . - . ID=gene-NYQ15_RS03165;Name=NYQ15_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03165 NZ_CP103431.1 Protein Homology CDS 588302 589282 . - 0 ID=cds-WP_259431052.1;Parent=gene-NYQ15_RS03165;Dbxref=GenBank:WP_259431052.1;Name=WP_259431052.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819669.1;locus_tag=NYQ15_RS03165;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_259431052.1;transl_table=11 NZ_CP103431.1 RefSeq gene 589487 590593 . - . ID=gene-NYQ15_RS03170;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=NYQ15_RS03170 NZ_CP103431.1 Protein Homology CDS 589487 590593 . - 0 ID=cds-WP_005771911.1;Parent=gene-NYQ15_RS03170;Dbxref=GenBank:WP_005771911.1;Name=WP_005771911.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=pdhA;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819670.1;locus_tag=NYQ15_RS03170;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=WP_005771911.1;transl_table=11 NZ_CP103431.1 RefSeq gene 590590 591738 . - . ID=gene-NYQ15_RS03175;Name=NYQ15_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03175 NZ_CP103431.1 Protein Homology CDS 590590 591738 . - 0 ID=cds-WP_010957709.1;Parent=gene-NYQ15_RS03175;Dbxref=GenBank:WP_010957709.1;Name=WP_010957709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819671.2;locus_tag=NYQ15_RS03175;product=Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein;protein_id=WP_010957709.1;transl_table=11 NZ_CP103431.1 RefSeq gene 591774 592526 . + . ID=gene-NYQ15_RS03180;Name=NYQ15_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03180 NZ_CP103431.1 Protein Homology CDS 591774 592526 . + 0 ID=cds-WP_010957710.1;Parent=gene-NYQ15_RS03180;Dbxref=GenBank:WP_010957710.1;Name=WP_010957710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819672.1;locus_tag=NYQ15_RS03180;product=glycerophosphoryl diester phosphodiesterase;protein_id=WP_010957710.1;transl_table=11 NZ_CP103431.1 RefSeq gene 592523 593587 . + . ID=gene-NYQ15_RS03185;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=NYQ15_RS03185 NZ_CP103431.1 Protein Homology CDS 592523 593587 . + 0 ID=cds-WP_005771905.1;Parent=gene-NYQ15_RS03185;Dbxref=GenBank:WP_005771905.1;Name=WP_005771905.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819673.1;locus_tag=NYQ15_RS03185;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_005771905.1;transl_table=11 NZ_CP103431.1 RefSeq gene 593565 593903 . - . ID=gene-NYQ15_RS03190;Name=NYQ15_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03190 NZ_CP103431.1 Protein Homology CDS 593565 593903 . - 0 ID=cds-WP_005772743.1;Parent=gene-NYQ15_RS03190;Dbxref=GenBank:WP_005772743.1;Name=WP_005772743.1;Ontology_term=GO:0030541,GO:0051290,GO:0008657,GO:0042803;gbkey=CDS;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) inhibitor activity|0008657||IEA,protein homodimerization activity|0042803||IEA;go_process=plasmid partitioning|0030541||IEA,protein heterotetramerization|0051290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819674.1;locus_tag=NYQ15_RS03190;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_005772743.1;transl_table=11 NZ_CP103431.1 RefSeq gene 593909 594172 . - . ID=gene-NYQ15_RS03195;Name=NYQ15_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03195 NZ_CP103431.1 Protein Homology CDS 593909 594172 . - 0 ID=cds-WP_005771901.1;Parent=gene-NYQ15_RS03195;Dbxref=GenBank:WP_005771901.1;Name=WP_005771901.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819675.1;locus_tag=NYQ15_RS03195;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_005771901.1;transl_table=11 NZ_CP103431.1 cmsearch riboswitch 594267 594403 . + . ID=id-NZ_CP103431.1:594267..594403;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CP103431.1 RefSeq gene 594527 595150 . + . ID=gene-NYQ15_RS03200;Name=NYQ15_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03200 NZ_CP103431.1 Protein Homology CDS 594527 595150 . + 0 ID=cds-WP_010957713.1;Parent=gene-NYQ15_RS03200;Dbxref=GenBank:WP_010957713.1;Name=WP_010957713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819676.2;locus_tag=NYQ15_RS03200;product=riboflavin synthase;protein_id=WP_010957713.1;transl_table=11 NZ_CP103431.1 RefSeq gene 595134 596354 . + . ID=gene-NYQ15_RS03205;Name=NYQ15_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03205 NZ_CP103431.1 Protein Homology CDS 595134 596354 . + 0 ID=cds-WP_005771894.1;Parent=gene-NYQ15_RS03205;Dbxref=GenBank:WP_005771894.1;Name=WP_005771894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819677.3;locus_tag=NYQ15_RS03205;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=WP_005771894.1;transl_table=11 NZ_CP103431.1 RefSeq gene 596351 596806 . + . ID=gene-NYQ15_RS03210;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=NYQ15_RS03210 NZ_CP103431.1 Protein Homology CDS 596351 596806 . + 0 ID=cds-WP_005771892.1;Parent=gene-NYQ15_RS03210;Dbxref=GenBank:WP_005771892.1;Name=WP_005771892.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819678.1;locus_tag=NYQ15_RS03210;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_005771892.1;transl_table=11 NZ_CP103431.1 RefSeq gene 596799 597890 . + . ID=gene-NYQ15_RS03215;Name=NYQ15_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03215 NZ_CP103431.1 Protein Homology CDS 596799 597890 . + 0 ID=cds-WP_005772744.1;Parent=gene-NYQ15_RS03215;Dbxref=GenBank:WP_005772744.1;Name=WP_005772744.1;Ontology_term=GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819679.1;locus_tag=NYQ15_RS03215;product=AI-2E family transporter;protein_id=WP_005772744.1;transl_table=11 NZ_CP103431.1 RefSeq gene 598063 598263 . + . ID=gene-NYQ15_RS03220;Name=NYQ15_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03220 NZ_CP103431.1 Protein Homology CDS 598063 598263 . + 0 ID=cds-WP_012220303.1;Parent=gene-NYQ15_RS03220;Dbxref=GenBank:WP_012220303.1;Name=WP_012220303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220303.1;locus_tag=NYQ15_RS03220;product=hypothetical protein;protein_id=WP_012220303.1;transl_table=11 NZ_CP103431.1 RefSeq gene 598341 599288 . + . ID=gene-NYQ15_RS03225;Name=NYQ15_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03225 NZ_CP103431.1 GeneMarkS-2+ CDS 598341 599288 . + 0 ID=cds-WP_259431053.1;Parent=gene-NYQ15_RS03225;Dbxref=GenBank:WP_259431053.1;Name=WP_259431053.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS03225;product=hypothetical protein;protein_id=WP_259431053.1;transl_table=11 NZ_CP103431.1 RefSeq gene 599322 600164 . + . ID=gene-NYQ15_RS03230;Name=NYQ15_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03230 NZ_CP103431.1 Protein Homology CDS 599322 600164 . + 0 ID=cds-WP_005771888.1;Parent=gene-NYQ15_RS03230;Dbxref=GenBank:WP_005771888.1;Name=WP_005771888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996678.1;locus_tag=NYQ15_RS03230;product=hypothetical protein;protein_id=WP_005771888.1;transl_table=11 NZ_CP103431.1 RefSeq gene 600188 600670 . + . ID=gene-NYQ15_RS03235;Name=NYQ15_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03235 NZ_CP103431.1 GeneMarkS-2+ CDS 600188 600670 . + 0 ID=cds-WP_259411769.1;Parent=gene-NYQ15_RS03235;Dbxref=GenBank:WP_259411769.1;Name=WP_259411769.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS03235;product=hypothetical protein;protein_id=WP_259411769.1;transl_table=11 NZ_CP103431.1 RefSeq gene 600667 601677 . + . ID=gene-NYQ15_RS03240;Name=NYQ15_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03240 NZ_CP103431.1 GeneMarkS-2+ CDS 600667 601677 . + 0 ID=cds-WP_259411770.1;Parent=gene-NYQ15_RS03240;Dbxref=GenBank:WP_259411770.1;Name=WP_259411770.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS03240;product=hypothetical protein;protein_id=WP_259411770.1;transl_table=11 NZ_CP103431.1 RefSeq gene 601680 602012 . - . ID=gene-NYQ15_RS03245;Name=NYQ15_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03245 NZ_CP103431.1 Protein Homology CDS 601680 602012 . - 0 ID=cds-WP_005772750.1;Parent=gene-NYQ15_RS03245;Dbxref=GenBank:WP_005772750.1;Name=WP_005772750.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819686.1;locus_tag=NYQ15_RS03245;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_005772750.1;transl_table=11 NZ_CP103431.1 RefSeq gene 602026 602631 . - . ID=gene-NYQ15_RS03250;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=NYQ15_RS03250 NZ_CP103431.1 Protein Homology CDS 602026 602631 . - 0 ID=cds-WP_005771885.1;Parent=gene-NYQ15_RS03250;Dbxref=GenBank:WP_005771885.1;Name=WP_005771885.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819687.1;locus_tag=NYQ15_RS03250;product=recombination mediator RecR;protein_id=WP_005771885.1;transl_table=11 NZ_CP103431.1 RefSeq gene 602643 603074 . - . ID=gene-NYQ15_RS03255;Name=NYQ15_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03255 NZ_CP103431.1 Protein Homology CDS 602643 603074 . - 0 ID=cds-WP_005771884.1;Parent=gene-NYQ15_RS03255;Dbxref=GenBank:WP_005771884.1;Name=WP_005771884.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819688.1;locus_tag=NYQ15_RS03255;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_005771884.1;transl_table=11 NZ_CP103431.1 RefSeq gene 603184 604713 . - . ID=gene-NYQ15_RS03260;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=NYQ15_RS03260 NZ_CP103431.1 Protein Homology CDS 603184 604713 . - 0 ID=cds-WP_005771883.1;Parent=gene-NYQ15_RS03260;Dbxref=GenBank:WP_005771883.1;Name=WP_005771883.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819689.1;locus_tag=NYQ15_RS03260;product=DNA polymerase III subunit gamma/tau;protein_id=WP_005771883.1;transl_table=11 NZ_CP103431.1 RefSeq gene 604747 604843 . - . ID=gene-NYQ15_RS03265;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=NYQ15_RS03265 NZ_CP103431.1 cmsearch SRP_RNA 604747 604843 . - . ID=rna-NYQ15_RS03265;Parent=gene-NYQ15_RS03265;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=NYQ15_RS03265;product=signal recognition particle sRNA small type NZ_CP103431.1 cmsearch exon 604747 604843 . - . ID=exon-NYQ15_RS03265-1;Parent=rna-NYQ15_RS03265;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=NYQ15_RS03265;product=signal recognition particle sRNA small type NZ_CP103431.1 RefSeq gene 604919 605009 . - . ID=gene-NYQ15_RS03270;Name=NYQ15_RS03270;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS03270 NZ_CP103431.1 tRNAscan-SE tRNA 604919 605009 . - . ID=rna-NYQ15_RS03270;Parent=gene-NYQ15_RS03270;anticodon=(pos:complement(604973..604975));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS03270;product=tRNA-Ser NZ_CP103431.1 tRNAscan-SE exon 604919 605009 . - . ID=exon-NYQ15_RS03270-1;Parent=rna-NYQ15_RS03270;anticodon=(pos:complement(604973..604975));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS03270;product=tRNA-Ser NZ_CP103431.1 RefSeq gene 605279 605689 . + . ID=gene-NYQ15_RS03275;Name=NYQ15_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03275 NZ_CP103431.1 Protein Homology CDS 605279 605689 . + 0 ID=cds-WP_259411771.1;Parent=gene-NYQ15_RS03275;Dbxref=GenBank:WP_259411771.1;Name=WP_259411771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819691.1;locus_tag=NYQ15_RS03275;product=AAA family ATPase;protein_id=WP_259411771.1;transl_table=11 NZ_CP103431.1 RefSeq gene 605679 605795 . + . ID=gene-NYQ15_RS03280;Name=NYQ15_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03280 NZ_CP103431.1 Protein Homology CDS 605679 605795 . + 0 ID=cds-WP_005771880.1;Parent=gene-NYQ15_RS03280;Dbxref=GenBank:WP_005771880.1;Name=WP_005771880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819692.1;locus_tag=NYQ15_RS03280;product=hypothetical protein;protein_id=WP_005771880.1;transl_table=11 NZ_CP103431.1 RefSeq gene 607115 607181 . + . ID=gene-NYQ15_RS03285;Name=NYQ15_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03285;partial=true;start_range=.,607115 NZ_CP103431.1 Protein Homology CDS 607115 607181 . + 1 ID=cds-WP_259411917.1;Parent=gene-NYQ15_RS03285;Dbxref=GenBank:WP_259411917.1;Name=WP_259411917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771875.1;locus_tag=NYQ15_RS03285;partial=true;product=hypothetical protein;protein_id=WP_259411917.1;start_range=.,607115;transl_table=11 NZ_CP103431.1 RefSeq gene 607273 608259 . + . ID=gene-NYQ15_RS03290;Name=NYQ15_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03290 NZ_CP103431.1 Protein Homology CDS 607273 608259 . + 0 ID=cds-WP_077019621.1;Parent=gene-NYQ15_RS03290;Dbxref=GenBank:WP_077019621.1;Name=WP_077019621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819695.1;locus_tag=NYQ15_RS03290;product=CBU_0665 family Dot/Icm T4SS effector;protein_id=WP_077019621.1;transl_table=11 NZ_CP103431.1 RefSeq gene 608273 609397 . - . ID=gene-NYQ15_RS03295;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=NYQ15_RS03295 NZ_CP103431.1 Protein Homology CDS 608273 609397 . - 0 ID=cds-WP_005771873.1;Parent=gene-NYQ15_RS03295;Dbxref=GenBank:WP_005771873.1;Name=WP_005771873.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819696.1;locus_tag=NYQ15_RS03295;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_005771873.1;transl_table=11 NZ_CP103431.1 RefSeq gene 609403 610218 . - . ID=gene-NYQ15_RS03300;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=NYQ15_RS03300 NZ_CP103431.1 Protein Homology CDS 609403 610218 . - 0 ID=cds-WP_005772290.1;Parent=gene-NYQ15_RS03300;Dbxref=GenBank:WP_005772290.1;Name=WP_005772290.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819697.1;locus_tag=NYQ15_RS03300;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_005772290.1;transl_table=11 NZ_CP103431.1 RefSeq gene 610215 610394 . - . ID=gene-NYQ15_RS03305;Name=NYQ15_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03305 NZ_CP103431.1 Protein Homology CDS 610215 610394 . - 0 ID=cds-WP_005771871.1;Parent=gene-NYQ15_RS03305;Dbxref=GenBank:WP_005771871.1;Name=WP_005771871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819698.1;locus_tag=NYQ15_RS03305;product=hypothetical protein;protein_id=WP_005771871.1;transl_table=11 NZ_CP103431.1 RefSeq gene 610394 610567 . + . ID=gene-NYQ15_RS03310;Name=NYQ15_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03310 NZ_CP103431.1 Protein Homology CDS 610394 610567 . + 0 ID=cds-WP_011996681.1;Parent=gene-NYQ15_RS03310;Dbxref=GenBank:WP_011996681.1;Name=WP_011996681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819699.1;locus_tag=NYQ15_RS03310;product=hypothetical protein;protein_id=WP_011996681.1;transl_table=11 NZ_CP103431.1 RefSeq gene 610618 610691 . + . ID=gene-NYQ15_RS03315;Name=NYQ15_RS03315;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS03315 NZ_CP103431.1 tRNAscan-SE tRNA 610618 610691 . + . ID=rna-NYQ15_RS03315;Parent=gene-NYQ15_RS03315;anticodon=(pos:610652..610654);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS03315;product=tRNA-Pro NZ_CP103431.1 tRNAscan-SE exon 610618 610691 . + . ID=exon-NYQ15_RS03315-1;Parent=rna-NYQ15_RS03315;anticodon=(pos:610652..610654);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS03315;product=tRNA-Pro NZ_CP103431.1 RefSeq gene 610818 612080 . + . ID=gene-NYQ15_RS03320;Name=NYQ15_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03320 NZ_CP103431.1 Protein Homology CDS 610818 612080 . + 0 ID=cds-WP_010957726.1;Parent=gene-NYQ15_RS03320;Dbxref=GenBank:WP_010957726.1;Name=WP_010957726.1;Ontology_term=GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819700.2;locus_tag=NYQ15_RS03320;product=DEAD/DEAH box helicase;protein_id=WP_010957726.1;transl_table=11 NZ_CP103431.1 RefSeq gene 612219 612292 . + . ID=gene-NYQ15_RS03325;Name=NYQ15_RS03325;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS03325 NZ_CP103431.1 tRNAscan-SE tRNA 612219 612292 . + . ID=rna-NYQ15_RS03325;Parent=gene-NYQ15_RS03325;anticodon=(pos:612253..612255);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS03325;product=tRNA-Arg NZ_CP103431.1 tRNAscan-SE exon 612219 612292 . + . ID=exon-NYQ15_RS03325-1;Parent=rna-NYQ15_RS03325;anticodon=(pos:612253..612255);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS03325;product=tRNA-Arg NZ_CP103431.1 RefSeq gene 612397 612472 . + . ID=gene-NYQ15_RS03330;Name=NYQ15_RS03330;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS03330 NZ_CP103431.1 tRNAscan-SE tRNA 612397 612472 . + . ID=rna-NYQ15_RS03330;Parent=gene-NYQ15_RS03330;anticodon=(pos:612430..612432);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS03330;product=tRNA-His NZ_CP103431.1 tRNAscan-SE exon 612397 612472 . + . ID=exon-NYQ15_RS03330-1;Parent=rna-NYQ15_RS03330;anticodon=(pos:612430..612432);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS03330;product=tRNA-His NZ_CP103431.1 RefSeq gene 612504 613937 . + . ID=gene-NYQ15_RS03335;Name=NYQ15_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03335 NZ_CP103431.1 Protein Homology CDS 612504 613937 . + 0 ID=cds-WP_005772301.1;Parent=gene-NYQ15_RS03335;Dbxref=GenBank:WP_005772301.1;Name=WP_005772301.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819701.1;locus_tag=NYQ15_RS03335;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_005772301.1;transl_table=11 NZ_CP103431.1 RefSeq gene 613923 615539 . - . ID=gene-NYQ15_RS03340;Name=NYQ15_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03340 NZ_CP103431.1 Protein Homology CDS 613923 615539 . - 0 ID=cds-WP_098953111.1;Parent=gene-NYQ15_RS03340;Dbxref=GenBank:WP_098953111.1;Name=WP_098953111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819702.1;locus_tag=NYQ15_RS03340;product=hypothetical protein;protein_id=WP_098953111.1;transl_table=11 NZ_CP103431.1 RefSeq gene 615532 616077 . - . ID=gene-NYQ15_RS03345;Name=NYQ15_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03345 NZ_CP103431.1 Protein Homology CDS 615532 616077 . - 0 ID=cds-WP_005771866.1;Parent=gene-NYQ15_RS03345;Dbxref=GenBank:WP_005771866.1;Name=WP_005771866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819703.1;locus_tag=NYQ15_RS03345;product=HAD family hydrolase;protein_id=WP_005771866.1;transl_table=11 NZ_CP103431.1 RefSeq gene 616071 616661 . - . ID=gene-NYQ15_RS03350;Name=NYQ15_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03350 NZ_CP103431.1 Protein Homology CDS 616071 616661 . - 0 ID=cds-WP_010957729.1;Parent=gene-NYQ15_RS03350;Dbxref=GenBank:WP_010957729.1;Name=WP_010957729.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819704.2;locus_tag=NYQ15_RS03350;product=SIS domain-containing protein;protein_id=WP_010957729.1;transl_table=11 NZ_CP103431.1 RefSeq gene 616665 617408 . - . ID=gene-NYQ15_RS03355;Name=NYQ15_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03355 NZ_CP103431.1 Protein Homology CDS 616665 617408 . - 0 ID=cds-WP_005771862.1;Parent=gene-NYQ15_RS03355;Dbxref=GenBank:WP_005771862.1;Name=WP_005771862.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819705.1;locus_tag=NYQ15_RS03355;product=transaldolase;protein_id=WP_005771862.1;transl_table=11 NZ_CP103431.1 RefSeq gene 617588 618601 . + . ID=gene-NYQ15_RS03360;Name=NYQ15_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03360 NZ_CP103431.1 Protein Homology CDS 617588 618601 . + 0 ID=cds-WP_005771860.1;Parent=gene-NYQ15_RS03360;Dbxref=GenBank:WP_005771860.1;Name=WP_005771860.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819706.1;locus_tag=NYQ15_RS03360;product=NAD(P)-dependent oxidoreductase;protein_id=WP_005771860.1;transl_table=11 NZ_CP103431.1 RefSeq gene 618598 619635 . + . ID=gene-NYQ15_RS03365;Name=NYQ15_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03365 NZ_CP103431.1 Protein Homology CDS 618598 619635 . + 0 ID=cds-WP_011996684.1;Parent=gene-NYQ15_RS03365;Dbxref=GenBank:WP_011996684.1;Name=WP_011996684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819707.2;locus_tag=NYQ15_RS03365;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_011996684.1;transl_table=11 NZ_CP103431.1 RefSeq gene 619610 621190 . + . ID=gene-NYQ15_RS03370;Name=NYQ15_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03370 NZ_CP103431.1 Protein Homology CDS 619610 621190 . + 0 ID=cds-WP_098953110.1;Parent=gene-NYQ15_RS03370;Dbxref=GenBank:WP_098953110.1;Name=WP_098953110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819708.1;locus_tag=NYQ15_RS03370;product=PfkB family carbohydrate kinase;protein_id=WP_098953110.1;transl_table=11 NZ_CP103431.1 RefSeq gene 621193 622137 . + . ID=gene-NYQ15_RS03375;Name=NYQ15_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03375 NZ_CP103431.1 Protein Homology CDS 621193 622137 . + 0 ID=cds-WP_005772297.1;Parent=gene-NYQ15_RS03375;Dbxref=GenBank:WP_005772297.1;Name=WP_005772297.1;Ontology_term=GO:0016491,GO:0016651;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819709.1;locus_tag=NYQ15_RS03375;product=Gfo/Idh/MocA family protein;protein_id=WP_005772297.1;transl_table=11 NZ_CP103431.1 RefSeq gene 622122 623432 . + . ID=gene-NYQ15_RS03380;Name=NYQ15_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03380 NZ_CP103431.1 Protein Homology CDS 622122 623432 . + 0 ID=cds-WP_005771851.1;Parent=gene-NYQ15_RS03380;Dbxref=GenBank:WP_005771851.1;Name=WP_005771851.1;Ontology_term=GO:0000271,GO:0016616,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819710.1;locus_tag=NYQ15_RS03380;product=nucleotide sugar dehydrogenase;protein_id=WP_005771851.1;transl_table=11 NZ_CP103431.1 RefSeq gene 623425 624330 . + . ID=gene-NYQ15_RS03385;Name=NYQ15_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03385 NZ_CP103431.1 Protein Homology CDS 623425 624330 . + 0 ID=cds-WP_259431054.1;Parent=gene-NYQ15_RS03385;Dbxref=GenBank:WP_259431054.1;Name=WP_259431054.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819711.1;locus_tag=NYQ15_RS03385;product=NAD(P)-dependent oxidoreductase;protein_id=WP_259431054.1;transl_table=11 NZ_CP103431.1 RefSeq gene 624333 624986 . + . ID=gene-NYQ15_RS03390;Name=NYQ15_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03390 NZ_CP103431.1 Protein Homology CDS 624333 624986 . + 0 ID=cds-WP_005771848.1;Parent=gene-NYQ15_RS03390;Dbxref=GenBank:WP_005771848.1;Name=WP_005771848.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819712.1;locus_tag=NYQ15_RS03390;product=class I SAM-dependent methyltransferase;protein_id=WP_005771848.1;transl_table=11 NZ_CP103431.1 RefSeq gene 624983 626245 . - . ID=gene-NYQ15_RS03395;Name=NYQ15_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03395 NZ_CP103431.1 Protein Homology CDS 624983 626245 . - 0 ID=cds-WP_012570856.1;Parent=gene-NYQ15_RS03395;Dbxref=GenBank:WP_012570856.1;Name=WP_012570856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819713.1;locus_tag=NYQ15_RS03395;product=FkbM family methyltransferase;protein_id=WP_012570856.1;transl_table=11 NZ_CP103431.1 RefSeq gene 626584 628002 . + . ID=gene-NYQ15_RS03400;Name=NYQ15_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03400 NZ_CP103431.1 Protein Homology CDS 626584 628002 . + 0 ID=cds-WP_011996689.1;Parent=gene-NYQ15_RS03400;Dbxref=GenBank:WP_011996689.1;Name=WP_011996689.1;Ontology_term=GO:0015016,GO:0016787;gbkey=CDS;go_function=[heparan sulfate]-glucosamine N-sulfotransferase activity|0015016||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819714.1;locus_tag=NYQ15_RS03400;product=sulfotransferase domain-containing protein;protein_id=WP_011996689.1;transl_table=11 NZ_CP103431.1 RefSeq gene 628447 631785 . + . ID=gene-NYQ15_RS03405;Name=NYQ15_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03405 NZ_CP103431.1 Protein Homology CDS 628447 631785 . + 0 ID=cds-WP_259431055.1;Parent=gene-NYQ15_RS03405;Dbxref=GenBank:WP_259431055.1;Name=WP_259431055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819715.1;locus_tag=NYQ15_RS03405;product=hypothetical protein;protein_id=WP_259431055.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 631838 632723 . + . ID=gene-NYQ15_RS03410;Name=NYQ15_RS03410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS03410;pseudo=true NZ_CP103431.1 Protein Homology CDS 631838 632723 . + 0 ID=cds-NYQ15_RS03410;Parent=gene-NYQ15_RS03410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819723.2;locus_tag=NYQ15_RS03410;product=transketolase C-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 632740 634383 . + . ID=gene-NYQ15_RS03415;Name=NYQ15_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03415 NZ_CP103431.1 Protein Homology CDS 632740 634383 . + 0 ID=cds-WP_005771838.1;Parent=gene-NYQ15_RS03415;Dbxref=GenBank:WP_005771838.1;Name=WP_005771838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819717.1;locus_tag=NYQ15_RS03415;product=hypothetical protein;protein_id=WP_005771838.1;transl_table=11 NZ_CP103431.1 RefSeq gene 634763 635761 . + . ID=gene-NYQ15_RS03420;Name=NYQ15_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03420 NZ_CP103431.1 Protein Homology CDS 634763 635761 . + 0 ID=cds-WP_005771836.1;Parent=gene-NYQ15_RS03420;Dbxref=GenBank:WP_005771836.1;Name=WP_005771836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819718.1;locus_tag=NYQ15_RS03420;product=GDP-L-fucose synthase;protein_id=WP_005771836.1;transl_table=11 NZ_CP103431.1 RefSeq gene 635754 636800 . + . ID=gene-NYQ15_RS03425;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=NYQ15_RS03425 NZ_CP103431.1 Protein Homology CDS 635754 636800 . + 0 ID=cds-WP_005771834.1;Parent=gene-NYQ15_RS03425;Dbxref=GenBank:WP_005771834.1;Name=WP_005771834.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819719.1;locus_tag=NYQ15_RS03425;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_005771834.1;transl_table=11 NZ_CP103431.1 RefSeq gene 636809 637666 . + . ID=gene-NYQ15_RS03430;Name=NYQ15_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03430 NZ_CP103431.1 Protein Homology CDS 636809 637666 . + 0 ID=cds-WP_010957739.1;Parent=gene-NYQ15_RS03430;Dbxref=GenBank:WP_010957739.1;Name=WP_010957739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819720.2;locus_tag=NYQ15_RS03430;product=glycosyltransferase;protein_id=WP_010957739.1;transl_table=11 NZ_CP103431.1 RefSeq gene 637659 638897 . + . ID=gene-NYQ15_RS03435;Name=NYQ15_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03435 NZ_CP103431.1 Protein Homology CDS 637659 638897 . + 0 ID=cds-WP_005771830.1;Parent=gene-NYQ15_RS03435;Dbxref=GenBank:WP_005771830.1;Name=WP_005771830.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819721.2;locus_tag=NYQ15_RS03435;product=class I SAM-dependent methyltransferase;protein_id=WP_005771830.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 638918 639038 . - . ID=gene-NYQ15_RS03440;Name=NYQ15_RS03440;end_range=639038,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS03440;partial=true;pseudo=true NZ_CP103431.1 Protein Homology CDS 638918 639038 . - 1 ID=cds-NYQ15_RS03440;Parent=gene-NYQ15_RS03440;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=639038,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819722.1;locus_tag=NYQ15_RS03440;partial=true;product=alpha-ketoacid dehydrogenase subunit beta;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 639054 639980 . - . ID=gene-NYQ15_RS03445;Name=NYQ15_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03445;partial=true;start_range=.,639054 NZ_CP103431.1 Protein Homology CDS 639054 639980 . - 0 ID=cds-WP_259431056.1;Parent=gene-NYQ15_RS03445;Dbxref=GenBank:WP_259431056.1;Name=WP_259431056.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819722.1;locus_tag=NYQ15_RS03445;partial=true;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_259431056.1;start_range=.,639054;transl_table=11 NZ_CP103431.1 RefSeq gene 639977 641026 . - . ID=gene-NYQ15_RS03450;Name=NYQ15_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03450 NZ_CP103431.1 Protein Homology CDS 639977 641026 . - 0 ID=cds-WP_011996696.1;Parent=gene-NYQ15_RS03450;Dbxref=GenBank:WP_011996696.1;Name=WP_011996696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819723.2;locus_tag=NYQ15_RS03450;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_011996696.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 641153 642263 . - . ID=gene-NYQ15_RS03455;Name=NYQ15_RS03455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS03455;pseudo=true NZ_CP103431.1 Protein Homology CDS 641153 642263 . - 0 ID=cds-NYQ15_RS03455;Parent=gene-NYQ15_RS03455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819724.1;locus_tag=NYQ15_RS03455;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 642325 643701 . - . ID=gene-NYQ15_RS03460;Name=NYQ15_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03460 NZ_CP103431.1 Protein Homology CDS 642325 643701 . - 0 ID=cds-WP_098953108.1;Parent=gene-NYQ15_RS03460;Dbxref=GenBank:WP_098953108.1;Name=WP_098953108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819725.1;locus_tag=NYQ15_RS03460;product=hypothetical protein;protein_id=WP_098953108.1;transl_table=11 NZ_CP103431.1 RefSeq gene 643694 644848 . - . ID=gene-NYQ15_RS03465;Name=NYQ15_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03465 NZ_CP103431.1 Protein Homology CDS 643694 644848 . - 0 ID=cds-WP_012570854.1;Parent=gene-NYQ15_RS03465;Dbxref=GenBank:WP_012570854.1;Name=WP_012570854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819726.2;locus_tag=NYQ15_RS03465;product=DegT/DnrJ/EryC1/StrS aminotransferase family protein;protein_id=WP_012570854.1;transl_table=11 NZ_CP103431.1 RefSeq gene 644879 646039 . - . ID=gene-NYQ15_RS03470;Name=NYQ15_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03470 NZ_CP103431.1 Protein Homology CDS 644879 646039 . - 0 ID=cds-WP_005771825.1;Parent=gene-NYQ15_RS03470;Dbxref=GenBank:WP_005771825.1;Name=WP_005771825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819727.1;locus_tag=NYQ15_RS03470;product=DegT/DnrJ/EryC1/StrS aminotransferase family protein;protein_id=WP_005771825.1;transl_table=11 NZ_CP103431.1 RefSeq gene 646062 647231 . - . ID=gene-NYQ15_RS03475;Name=NYQ15_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03475 NZ_CP103431.1 Protein Homology CDS 646062 647231 . - 0 ID=cds-WP_005771824.1;Parent=gene-NYQ15_RS03475;Dbxref=GenBank:WP_005771824.1;Name=WP_005771824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819728.1;locus_tag=NYQ15_RS03475;product=hypothetical protein;protein_id=WP_005771824.1;transl_table=11 NZ_CP103431.1 RefSeq gene 647434 648993 . + . ID=gene-NYQ15_RS03480;Name=NYQ15_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03480 NZ_CP103431.1 Protein Homology CDS 647434 648993 . + 0 ID=cds-WP_098953107.1;Parent=gene-NYQ15_RS03480;Dbxref=GenBank:WP_098953107.1;Name=WP_098953107.1;Ontology_term=GO:0015016,GO:0016787;gbkey=CDS;go_function=[heparan sulfate]-glucosamine N-sulfotransferase activity|0015016||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819729.1;locus_tag=NYQ15_RS03480;product=sulfotransferase domain-containing protein;protein_id=WP_098953107.1;transl_table=11 NZ_CP103431.1 RefSeq gene 649029 650786 . - . ID=gene-NYQ15_RS03485;Name=NYQ15_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03485 NZ_CP103431.1 Protein Homology CDS 649029 650786 . - 0 ID=cds-WP_032075119.1;Parent=gene-NYQ15_RS03485;Dbxref=GenBank:WP_032075119.1;Name=WP_032075119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819730.2;locus_tag=NYQ15_RS03485;product=bifunctional sulfate adenylyltransferase/adenylylsulfate kinase;protein_id=WP_032075119.1;transl_table=11 NZ_CP103431.1 RefSeq gene 650768 651601 . - . ID=gene-NYQ15_RS03490;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=NYQ15_RS03490 NZ_CP103431.1 Protein Homology CDS 650768 651601 . - 0 ID=cds-WP_010957748.1;Parent=gene-NYQ15_RS03490;Dbxref=GenBank:WP_010957748.1;Name=WP_010957748.1;Ontology_term=GO:0006790,GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819731.2;locus_tag=NYQ15_RS03490;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_010957748.1;transl_table=11 NZ_CP103431.1 RefSeq gene 651738 652487 . + . ID=gene-NYQ15_RS03495;Name=NYQ15_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03495 NZ_CP103431.1 Protein Homology CDS 651738 652487 . + 0 ID=cds-WP_005771818.1;Parent=gene-NYQ15_RS03495;Dbxref=GenBank:WP_005771818.1;Name=WP_005771818.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819732.1;locus_tag=NYQ15_RS03495;product=SDR family oxidoreductase;protein_id=WP_005771818.1;transl_table=11 NZ_CP103431.1 RefSeq gene 652497 653360 . + . ID=gene-NYQ15_RS03500;Name=NYQ15_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03500 NZ_CP103431.1 Protein Homology CDS 652497 653360 . + 0 ID=cds-WP_005771816.1;Parent=gene-NYQ15_RS03500;Dbxref=GenBank:WP_005771816.1;Name=WP_005771816.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819733.1;locus_tag=NYQ15_RS03500;product=ABC transporter permease;protein_id=WP_005771816.1;transl_table=11 NZ_CP103431.1 RefSeq gene 653370 654146 . + . ID=gene-NYQ15_RS03505;Name=NYQ15_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03505 NZ_CP103431.1 Protein Homology CDS 653370 654146 . + 0 ID=cds-WP_005771814.1;Parent=gene-NYQ15_RS03505;Dbxref=GenBank:WP_005771814.1;Name=WP_005771814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819734.1;locus_tag=NYQ15_RS03505;product=ABC transporter ATP-binding protein;protein_id=WP_005771814.1;transl_table=11 NZ_CP103431.1 RefSeq gene 654631 654703 . + . ID=gene-NYQ15_RS03510;Name=NYQ15_RS03510;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS03510 NZ_CP103431.1 tRNAscan-SE tRNA 654631 654703 . + . ID=rna-NYQ15_RS03510;Parent=gene-NYQ15_RS03510;anticodon=(pos:654664..654666);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS03510;product=tRNA-Lys NZ_CP103431.1 tRNAscan-SE exon 654631 654703 . + . ID=exon-NYQ15_RS03510-1;Parent=rna-NYQ15_RS03510;anticodon=(pos:654664..654666);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS03510;product=tRNA-Lys NZ_CP103431.1 RefSeq gene 654857 655186 . - . ID=gene-NYQ15_RS03515;Name=NYQ15_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03515 NZ_CP103431.1 Protein Homology CDS 654857 655186 . - 0 ID=cds-WP_010957751.1;Parent=gene-NYQ15_RS03515;Dbxref=GenBank:WP_010957751.1;Name=WP_010957751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819735.1;locus_tag=NYQ15_RS03515;product=hypothetical protein;protein_id=WP_010957751.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 655203 655912 . - . ID=gene-NYQ15_RS03520;Name=NYQ15_RS03520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS03520;pseudo=true NZ_CP103431.1 Protein Homology CDS 655203 655912 . - 0 ID=cds-NYQ15_RS03520;Parent=gene-NYQ15_RS03520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819736.1;locus_tag=NYQ15_RS03520;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 656026 656316 . - . ID=gene-NYQ15_RS03525;Name=NYQ15_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03525 NZ_CP103431.1 Protein Homology CDS 656026 656316 . - 0 ID=cds-WP_259431057.1;Parent=gene-NYQ15_RS03525;Dbxref=GenBank:WP_259431057.1;Name=WP_259431057.1;Ontology_term=GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819737.1;locus_tag=NYQ15_RS03525;product=AI-2E family transporter;protein_id=WP_259431057.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 656282 656367 . + . ID=gene-NYQ15_RS10545;Name=NYQ15_RS10545;end_range=656367,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS10545;partial=true;pseudo=true NZ_CP103431.1 Protein Homology CDS 656282 656367 . + 0 ID=cds-NYQ15_RS10545;Parent=gene-NYQ15_RS10545;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=656367,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772284.1;locus_tag=NYQ15_RS10545;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 656384 656768 . + . ID=gene-NYQ15_RS10565;Name=NYQ15_RS10565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS10565;partial=true;pseudo=true;start_range=.,656384 NZ_CP103431.1 Protein Homology CDS 656384 656768 . + 0 ID=cds-NYQ15_RS10565;Parent=gene-NYQ15_RS10565;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772284.1;locus_tag=NYQ15_RS10565;partial=true;product=REP-associated tyrosine transposase;pseudo=true;start_range=.,656384;transl_table=11 NZ_CP103431.1 RefSeq gene 656910 657728 . - . ID=gene-NYQ15_RS03540;Name=NYQ15_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03540 NZ_CP103431.1 Protein Homology CDS 656910 657728 . - 0 ID=cds-WP_230454391.1;Parent=gene-NYQ15_RS03540;Dbxref=GenBank:WP_230454391.1;Name=WP_230454391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771809.1;locus_tag=NYQ15_RS03540;product=hypothetical protein;protein_id=WP_230454391.1;transl_table=11 NZ_CP103431.1 RefSeq gene 658051 658194 . - . ID=gene-NYQ15_RS03545;Name=NYQ15_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03545 NZ_CP103431.1 Protein Homology CDS 658051 658194 . - 0 ID=cds-WP_005771808.1;Parent=gene-NYQ15_RS03545;Dbxref=GenBank:WP_005771808.1;Name=WP_005771808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819740.1;locus_tag=NYQ15_RS03545;product=hypothetical protein;protein_id=WP_005771808.1;transl_table=11 NZ_CP103431.1 RefSeq gene 658254 658709 . - . ID=gene-NYQ15_RS03550;Name=NYQ15_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03550 NZ_CP103431.1 GeneMarkS-2+ CDS 658254 658709 . - 0 ID=cds-WP_032075117.1;Parent=gene-NYQ15_RS03550;Dbxref=GenBank:WP_032075117.1;Name=WP_032075117.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS03550;product=hypothetical protein;protein_id=WP_032075117.1;transl_table=11 NZ_CP103431.1 RefSeq gene 659186 659821 . - . ID=gene-NYQ15_RS03555;Name=NYQ15_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03555 NZ_CP103431.1 Protein Homology CDS 659186 659821 . - 0 ID=cds-WP_005771807.1;Parent=gene-NYQ15_RS03555;Dbxref=GenBank:WP_005771807.1;Name=WP_005771807.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819741.1;locus_tag=NYQ15_RS03555;product=response regulator;protein_id=WP_005771807.1;transl_table=11 NZ_CP103431.1 RefSeq gene 659880 661208 . - . ID=gene-NYQ15_RS03560;Name=NYQ15_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03560 NZ_CP103431.1 Protein Homology CDS 659880 661208 . - 0 ID=cds-WP_005771806.1;Parent=gene-NYQ15_RS03560;Dbxref=GenBank:WP_005771806.1;Name=WP_005771806.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220329.1;locus_tag=NYQ15_RS03560;product=MFS transporter;protein_id=WP_005771806.1;transl_table=11 NZ_CP103431.1 RefSeq gene 661180 661590 . - . ID=gene-NYQ15_RS03565;Name=NYQ15_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03565 NZ_CP103431.1 Protein Homology CDS 661180 661590 . - 0 ID=cds-WP_010957756.1;Parent=gene-NYQ15_RS03565;Dbxref=GenBank:WP_010957756.1;Name=WP_010957756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819743.2;locus_tag=NYQ15_RS03565;product=DUF3775 domain-containing protein;protein_id=WP_010957756.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 662652 662759 . + . ID=gene-NYQ15_RS03570;Name=NYQ15_RS03570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS03570;partial=true;pseudo=true;start_range=.,662652 NZ_CP103431.1 Protein Homology CDS 662652 662759 . + 0 ID=cds-NYQ15_RS03570;Parent=gene-NYQ15_RS03570;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819744.1;locus_tag=NYQ15_RS03570;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,662652;transl_table=11 NZ_CP103431.1 RefSeq gene 662818 663735 . - . ID=gene-NYQ15_RS03575;Name=NYQ15_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03575 NZ_CP103431.1 Protein Homology CDS 662818 663735 . - 0 ID=cds-WP_005771795.1;Parent=gene-NYQ15_RS03575;Dbxref=GenBank:WP_005771795.1;Name=WP_005771795.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819745.1;locus_tag=NYQ15_RS03575;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_005771795.1;transl_table=11 NZ_CP103431.1 RefSeq gene 663883 664206 . + . ID=gene-NYQ15_RS03580;Name=NYQ15_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03580 NZ_CP103431.1 Protein Homology CDS 663883 664206 . + 0 ID=cds-WP_259411776.1;Parent=gene-NYQ15_RS03580;Dbxref=GenBank:WP_259411776.1;Name=WP_259411776.1;Ontology_term=GO:0030976;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: protein motif:HMM:NF014795.5;locus_tag=NYQ15_RS03580;product=thiamine pyrophosphate-binding protein;protein_id=WP_259411776.1;transl_table=11 NZ_CP103431.1 RefSeq gene 664148 664819 . + . ID=gene-NYQ15_RS03585;Name=NYQ15_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03585 NZ_CP103431.1 Protein Homology CDS 664148 664819 . + 0 ID=cds-WP_259431058.1;Parent=gene-NYQ15_RS03585;Dbxref=GenBank:WP_259431058.1;Name=WP_259431058.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012431.5;locus_tag=NYQ15_RS03585;product=thiamine pyrophosphate-binding protein;protein_id=WP_259431058.1;transl_table=11 NZ_CP103431.1 RefSeq gene 664917 665552 . + . ID=gene-NYQ15_RS03590;Name=NYQ15_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03590 NZ_CP103431.1 Protein Homology CDS 664917 665552 . + 0 ID=cds-WP_259431059.1;Parent=gene-NYQ15_RS03590;Dbxref=GenBank:WP_259431059.1;Name=WP_259431059.1;Ontology_term=GO:0003824,GO:0030976;gbkey=CDS;go_function=catalytic activity|0003824||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: protein motif:HMM:NF014794.5;locus_tag=NYQ15_RS03590;product=thiamine pyrophosphate-dependent enzyme;protein_id=WP_259431059.1;transl_table=11 NZ_CP103431.1 RefSeq gene 665787 666071 . + . ID=gene-NYQ15_RS03595;Name=NYQ15_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03595 NZ_CP103431.1 Protein Homology CDS 665787 666071 . + 0 ID=cds-WP_005771796.1;Parent=gene-NYQ15_RS03595;Dbxref=GenBank:WP_005771796.1;Name=WP_005771796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819746.1;locus_tag=NYQ15_RS03595;product=hypothetical protein;protein_id=WP_005771796.1;transl_table=11 NZ_CP103431.1 RefSeq gene 666068 666493 . + . ID=gene-NYQ15_RS03600;Name=NYQ15_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03600 NZ_CP103431.1 Protein Homology CDS 666068 666493 . + 0 ID=cds-WP_010957760.1;Parent=gene-NYQ15_RS03600;Dbxref=GenBank:WP_010957760.1;Name=WP_010957760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819747.1;locus_tag=NYQ15_RS03600;product=hypothetical protein;protein_id=WP_010957760.1;transl_table=11 NZ_CP103431.1 RefSeq gene 666549 667430 . - . ID=gene-NYQ15_RS03605;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=NYQ15_RS03605 NZ_CP103431.1 Protein Homology CDS 666549 667430 . - 0 ID=cds-WP_005771798.1;Parent=gene-NYQ15_RS03605;Dbxref=GenBank:WP_005771798.1;Name=WP_005771798.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819748.1;locus_tag=NYQ15_RS03605;product=agmatinase;protein_id=WP_005771798.1;transl_table=11 NZ_CP103431.1 RefSeq gene 667430 668491 . - . ID=gene-NYQ15_RS03610;Name=NYQ15_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03610 NZ_CP103431.1 Protein Homology CDS 667430 668491 . - 0 ID=cds-WP_010957761.1;Parent=gene-NYQ15_RS03610;Dbxref=GenBank:WP_010957761.1;Name=WP_010957761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819749.2;locus_tag=NYQ15_RS03610;product=1%2C9-bis(guanidino)-5-aza-nonane synthase;protein_id=WP_010957761.1;transl_table=11 NZ_CP103431.1 RefSeq gene 668515 669717 . - . ID=gene-NYQ15_RS03615;Name=NYQ15_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03615 NZ_CP103431.1 Protein Homology CDS 668515 669717 . - 0 ID=cds-WP_011996709.1;Parent=gene-NYQ15_RS03615;Dbxref=GenBank:WP_011996709.1;Name=WP_011996709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819750.2;locus_tag=NYQ15_RS03615;product=type III PLP-dependent enzyme;protein_id=WP_011996709.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 669963 670091 . - . ID=gene-NYQ15_RS03620;Name=NYQ15_RS03620;end_range=670091,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS03620;partial=true;pseudo=true NZ_CP103431.1 Protein Homology CDS 669963 670091 . - 0 ID=cds-NYQ15_RS03620;Parent=gene-NYQ15_RS03620;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=670091,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819744.1;locus_tag=NYQ15_RS03620;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 671068 672063 . - . ID=gene-NYQ15_RS03625;Name=NYQ15_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03625 NZ_CP103431.1 Protein Homology CDS 671068 672063 . - 0 ID=cds-WP_005771794.1;Parent=gene-NYQ15_RS03625;Dbxref=GenBank:WP_005771794.1;Name=WP_005771794.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012371.5;locus_tag=NYQ15_RS03625;product=serine hydrolase;protein_id=WP_005771794.1;transl_table=11 NZ_CP103431.1 RefSeq gene 672041 672214 . - . ID=gene-NYQ15_RS03630;Name=NYQ15_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03630 NZ_CP103431.1 GeneMarkS-2+ CDS 672041 672214 . - 0 ID=cds-WP_259431060.1;Parent=gene-NYQ15_RS03630;Dbxref=GenBank:WP_259431060.1;Name=WP_259431060.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS03630;product=hypothetical protein;protein_id=WP_259431060.1;transl_table=11 NZ_CP103431.1 RefSeq gene 672466 673599 . + . ID=gene-NYQ15_RS03635;Name=NYQ15_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03635 NZ_CP103431.1 Protein Homology CDS 672466 673599 . + 0 ID=cds-WP_005772900.1;Parent=gene-NYQ15_RS03635;Dbxref=GenBank:WP_005772900.1;Name=WP_005772900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819753.1;locus_tag=NYQ15_RS03635;product=MlaE family lipid ABC transporter permease subunit;protein_id=WP_005772900.1;transl_table=11 NZ_CP103431.1 RefSeq gene 673596 674405 . + . ID=gene-NYQ15_RS03640;Name=NYQ15_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03640 NZ_CP103431.1 Protein Homology CDS 673596 674405 . + 0 ID=cds-WP_012570848.1;Parent=gene-NYQ15_RS03640;Dbxref=GenBank:WP_012570848.1;Name=WP_012570848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819754.2;locus_tag=NYQ15_RS03640;product=ABC transporter ATP-binding protein;protein_id=WP_012570848.1;transl_table=11 NZ_CP103431.1 RefSeq gene 674389 675315 . + . ID=gene-NYQ15_RS03645;Name=NYQ15_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03645 NZ_CP103431.1 Protein Homology CDS 674389 675315 . + 0 ID=cds-WP_005771786.1;Parent=gene-NYQ15_RS03645;Dbxref=GenBank:WP_005771786.1;Name=WP_005771786.1;Ontology_term=GO:0015914;gbkey=CDS;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819755.1;locus_tag=NYQ15_RS03645;product=MlaD family protein;protein_id=WP_005771786.1;transl_table=11 NZ_CP103431.1 RefSeq gene 675318 675917 . + . ID=gene-NYQ15_RS03650;Name=NYQ15_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03650 NZ_CP103431.1 Protein Homology CDS 675318 675917 . + 0 ID=cds-WP_005771783.1;Parent=gene-NYQ15_RS03650;Dbxref=GenBank:WP_005771783.1;Name=WP_005771783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819756.1;locus_tag=NYQ15_RS03650;product=ABC-type transport auxiliary lipoprotein family protein;protein_id=WP_005771783.1;transl_table=11 NZ_CP103431.1 RefSeq gene 675914 676384 . - . ID=gene-NYQ15_RS03655;Name=NYQ15_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03655 NZ_CP103431.1 Protein Homology CDS 675914 676384 . - 0 ID=cds-WP_010957765.1;Parent=gene-NYQ15_RS03655;Dbxref=GenBank:WP_010957765.1;Name=WP_010957765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819757.2;locus_tag=NYQ15_RS03655;product=hypothetical protein;protein_id=WP_010957765.1;transl_table=11 NZ_CP103431.1 RefSeq gene 676487 677392 . - . ID=gene-NYQ15_RS03660;Name=NYQ15_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03660 NZ_CP103431.1 Protein Homology CDS 676487 677392 . - 0 ID=cds-WP_230454448.1;Parent=gene-NYQ15_RS03660;Dbxref=GenBank:WP_230454448.1;Name=WP_230454448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771779.1;locus_tag=NYQ15_RS03660;product=hypothetical protein;protein_id=WP_230454448.1;transl_table=11 NZ_CP103431.1 RefSeq gene 677679 678527 . + . ID=gene-NYQ15_RS03670;Name=NYQ15_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03670 NZ_CP103431.1 Protein Homology CDS 677679 678527 . + 0 ID=cds-WP_005772902.1;Parent=gene-NYQ15_RS03670;Dbxref=GenBank:WP_005772902.1;Name=WP_005772902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819761.1;locus_tag=NYQ15_RS03670;product=nucleoside phosphorylase;protein_id=WP_005772902.1;transl_table=11 NZ_CP103431.1 RefSeq gene 678548 679201 . - . ID=gene-NYQ15_RS03675;Name=NYQ15_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03675 NZ_CP103431.1 Protein Homology CDS 678548 679201 . - 0 ID=cds-WP_005772903.1;Parent=gene-NYQ15_RS03675;Dbxref=GenBank:WP_005772903.1;Name=WP_005772903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819762.1;locus_tag=NYQ15_RS03675;product=hypothetical protein;protein_id=WP_005772903.1;transl_table=11 NZ_CP103431.1 RefSeq gene 679398 679482 . + . ID=gene-NYQ15_RS03680;Name=NYQ15_RS03680;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS03680 NZ_CP103431.1 tRNAscan-SE tRNA 679398 679482 . + . ID=rna-NYQ15_RS03680;Parent=gene-NYQ15_RS03680;anticodon=(pos:679432..679434);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS03680;product=tRNA-Leu NZ_CP103431.1 tRNAscan-SE exon 679398 679482 . + . ID=exon-NYQ15_RS03680-1;Parent=rna-NYQ15_RS03680;anticodon=(pos:679432..679434);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS03680;product=tRNA-Leu NZ_CP103431.1 RefSeq gene 679490 680818 . + . ID=gene-NYQ15_RS03685;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=NYQ15_RS03685 NZ_CP103431.1 Protein Homology CDS 679490 680818 . + 0 ID=cds-WP_043902315.1;Parent=gene-NYQ15_RS03685;Dbxref=GenBank:WP_043902315.1;Name=WP_043902315.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819763.1;locus_tag=NYQ15_RS03685;product=trigger factor;protein_id=WP_043902315.1;transl_table=11 NZ_CP103431.1 RefSeq gene 680828 681415 . + . ID=gene-NYQ15_RS03690;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=NYQ15_RS03690 NZ_CP103431.1 Protein Homology CDS 680828 681415 . + 0 ID=cds-WP_005771772.1;Parent=gene-NYQ15_RS03690;Dbxref=GenBank:WP_005771772.1;Name=WP_005771772.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819764.1;locus_tag=NYQ15_RS03690;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_005771772.1;transl_table=11 NZ_CP103431.1 RefSeq gene 681470 682738 . + . ID=gene-NYQ15_RS03695;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=NYQ15_RS03695 NZ_CP103431.1 Protein Homology CDS 681470 682738 . + 0 ID=cds-WP_005772901.1;Parent=gene-NYQ15_RS03695;Dbxref=GenBank:WP_005772901.1;Name=WP_005772901.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819765.1;locus_tag=NYQ15_RS03695;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_005772901.1;transl_table=11 NZ_CP103431.1 RefSeq gene 682752 685205 . + . ID=gene-NYQ15_RS03700;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=NYQ15_RS03700 NZ_CP103431.1 Protein Homology CDS 682752 685205 . + 0 ID=cds-WP_005771770.1;Parent=gene-NYQ15_RS03700;Dbxref=GenBank:WP_005771770.1;Name=WP_005771770.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819766.1;locus_tag=NYQ15_RS03700;product=endopeptidase La;protein_id=WP_005771770.1;transl_table=11 NZ_CP103431.1 RefSeq gene 685214 686536 . + . ID=gene-NYQ15_RS03705;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=NYQ15_RS03705 NZ_CP103431.1 Protein Homology CDS 685214 686536 . + 0 ID=cds-WP_005771769.1;Parent=gene-NYQ15_RS03705;Dbxref=GenBank:WP_005771769.1;Name=WP_005771769.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819767.1;locus_tag=NYQ15_RS03705;product=metalloprotease PmbA;protein_id=WP_005771769.1;transl_table=11 NZ_CP103431.1 RefSeq gene 686763 687032 . - . ID=gene-NYQ15_RS03710;Name=NYQ15_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03710 NZ_CP103431.1 Protein Homology CDS 686763 687032 . - 0 ID=cds-WP_005771768.1;Parent=gene-NYQ15_RS03710;Dbxref=GenBank:WP_005771768.1;Name=WP_005771768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819769.1;locus_tag=NYQ15_RS03710;product=HPr family phosphocarrier protein;protein_id=WP_005771768.1;transl_table=11 NZ_CP103431.1 RefSeq gene 687013 687591 . - . ID=gene-NYQ15_RS03715;Name=NYQ15_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03715 NZ_CP103431.1 Protein Homology CDS 687013 687591 . - 0 ID=cds-WP_005771767.1;Parent=gene-NYQ15_RS03715;Dbxref=GenBank:WP_005771767.1;Name=WP_005771767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819770.1;locus_tag=NYQ15_RS03715;product=HPr kinase/phosphorylase-related protein;protein_id=WP_005771767.1;transl_table=11 NZ_CP103431.1 RefSeq gene 687591 687881 . - . ID=gene-NYQ15_RS03720;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=NYQ15_RS03720 NZ_CP103431.1 Protein Homology CDS 687591 687881 . - 0 ID=cds-WP_005771766.1;Parent=gene-NYQ15_RS03720;Dbxref=GenBank:WP_005771766.1;Name=WP_005771766.1;Ontology_term=GO:0045182,GO:0005840;gbkey=CDS;gene=hpf;go_component=ribosome|0005840||IEA;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819771.1;locus_tag=NYQ15_RS03720;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;protein_id=WP_005771766.1;transl_table=11 NZ_CP103431.1 RefSeq gene 687980 688726 . - . ID=gene-NYQ15_RS03725;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=NYQ15_RS03725 NZ_CP103431.1 Protein Homology CDS 687980 688726 . - 0 ID=cds-WP_039669695.1;Parent=gene-NYQ15_RS03725;Dbxref=GenBank:WP_039669695.1;Name=WP_039669695.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819772.2;locus_tag=NYQ15_RS03725;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_039669695.1;transl_table=11 NZ_CP103431.1 RefSeq gene 688732 689247 . - . ID=gene-NYQ15_RS03730;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=NYQ15_RS03730 NZ_CP103431.1 Protein Homology CDS 688732 689247 . - 0 ID=cds-WP_005771762.1;Parent=gene-NYQ15_RS03730;Dbxref=GenBank:WP_005771762.1;Name=WP_005771762.1;Ontology_term=GO:0015920,GO:0001530,GO:0042597;gbkey=CDS;gene=lptA;go_component=periplasmic space|0042597||IEA;go_function=lipopolysaccharide binding|0001530||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771762.1;locus_tag=NYQ15_RS03730;product=lipopolysaccharide transport periplasmic protein LptA;protein_id=WP_005771762.1;transl_table=11 NZ_CP103431.1 RefSeq gene 689210 689797 . - . ID=gene-NYQ15_RS03735;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=NYQ15_RS03735 NZ_CP103431.1 Protein Homology CDS 689210 689797 . - 0 ID=cds-WP_005772879.1;Parent=gene-NYQ15_RS03735;Dbxref=GenBank:WP_005772879.1;Name=WP_005772879.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptC;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819774.1;locus_tag=NYQ15_RS03735;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_005772879.1;transl_table=11 NZ_CP103431.1 RefSeq gene 689813 690310 . - . ID=gene-NYQ15_RS03740;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=NYQ15_RS03740 NZ_CP103431.1 Protein Homology CDS 689813 690310 . - 0 ID=cds-WP_005771759.1;Parent=gene-NYQ15_RS03740;Dbxref=GenBank:WP_005771759.1;Name=WP_005771759.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819775.1;locus_tag=NYQ15_RS03740;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_005771759.1;transl_table=11 NZ_CP103431.1 RefSeq gene 690312 691286 . - . ID=gene-NYQ15_RS03745;Name=NYQ15_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03745 NZ_CP103431.1 Protein Homology CDS 690312 691286 . - 0 ID=cds-WP_005771757.1;Parent=gene-NYQ15_RS03745;Dbxref=GenBank:WP_005771757.1;Name=WP_005771757.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771757.1;locus_tag=NYQ15_RS03745;product=KpsF/GutQ family sugar-phosphate isomerase;protein_id=WP_005771757.1;transl_table=11 NZ_CP103431.1 RefSeq gene 691437 692741 . + . ID=gene-NYQ15_RS03750;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=NYQ15_RS03750 NZ_CP103431.1 Protein Homology CDS 691437 692741 . + 0 ID=cds-WP_005771755.1;Parent=gene-NYQ15_RS03750;Dbxref=GenBank:WP_005771755.1;Name=WP_005771755.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819777.1;locus_tag=NYQ15_RS03750;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_005771755.1;transl_table=11 NZ_CP103431.1 RefSeq gene 692744 693673 . + . ID=gene-NYQ15_RS03755;Name=NYQ15_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03755 NZ_CP103431.1 Protein Homology CDS 692744 693673 . + 0 ID=cds-WP_005772883.1;Parent=gene-NYQ15_RS03755;Dbxref=GenBank:WP_005772883.1;Name=WP_005772883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220492.1;locus_tag=NYQ15_RS03755;product=carboxylesterase;protein_id=WP_005772883.1;transl_table=11 NZ_CP103431.1 RefSeq gene 693984 697052 . - . ID=gene-NYQ15_RS03765;Name=NYQ15_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03765 NZ_CP103431.1 Protein Homology CDS 693984 697052 . - 0 ID=cds-WP_005772877.1;Parent=gene-NYQ15_RS03765;Dbxref=GenBank:WP_005772877.1;Name=WP_005772877.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819779.1;locus_tag=NYQ15_RS03765;product=efflux RND transporter permease subunit;protein_id=WP_005772877.1;transl_table=11 NZ_CP103431.1 RefSeq gene 697100 698146 . - . ID=gene-NYQ15_RS03770;Name=NYQ15_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03770 NZ_CP103431.1 Protein Homology CDS 697100 698146 . - 0 ID=cds-WP_098953045.1;Parent=gene-NYQ15_RS03770;Dbxref=GenBank:WP_098953045.1;Name=WP_098953045.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819780.1;locus_tag=NYQ15_RS03770;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_098953045.1;transl_table=11 NZ_CP103431.1 RefSeq gene 698146 699501 . - . ID=gene-NYQ15_RS03775;Name=NYQ15_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03775 NZ_CP103431.1 Protein Homology CDS 698146 699501 . - 0 ID=cds-WP_005772880.1;Parent=gene-NYQ15_RS03775;Dbxref=GenBank:WP_005772880.1;Name=WP_005772880.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819781.1;locus_tag=NYQ15_RS03775;product=Do family serine endopeptidase;protein_id=WP_005772880.1;transl_table=11 NZ_CP103431.1 RefSeq gene 699662 700369 . - . ID=gene-NYQ15_RS03780;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=NYQ15_RS03780 NZ_CP103431.1 Protein Homology CDS 699662 700369 . - 0 ID=cds-WP_197704248.1;Parent=gene-NYQ15_RS03780;Dbxref=GenBank:WP_197704248.1;Name=WP_197704248.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769017.1;locus_tag=NYQ15_RS03780;product=peptidoglycan editing factor PgeF;protein_id=WP_197704248.1;transl_table=11 NZ_CP103431.1 RefSeq gene 700341 701324 . - . ID=gene-NYQ15_RS03785;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=NYQ15_RS03785 NZ_CP103431.1 Protein Homology CDS 700341 701324 . - 0 ID=cds-WP_010957782.1;Parent=gene-NYQ15_RS03785;Dbxref=GenBank:WP_010957782.1;Name=WP_010957782.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_338280.2;locus_tag=NYQ15_RS03785;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_010957782.1;transl_table=11 NZ_CP103431.1 RefSeq gene 701435 702202 . + . ID=gene-NYQ15_RS03790;Name=NYQ15_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03790 NZ_CP103431.1 Protein Homology CDS 701435 702202 . + 0 ID=cds-WP_005769012.1;Parent=gene-NYQ15_RS03790;Dbxref=GenBank:WP_005769012.1;Name=WP_005769012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769012.1;locus_tag=NYQ15_RS03790;product=outer membrane protein assembly factor BamD;protein_id=WP_005769012.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 702408 703354 . - . ID=gene-NYQ15_RS10570;Name=NYQ15_RS10570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS10570;pseudo=true NZ_CP103431.1 Protein Homology CDS 702408 703354 . - 0 ID=cds-NYQ15_RS10570;Parent=gene-NYQ15_RS10570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016629.5;locus_tag=NYQ15_RS10570;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 703436 703810 . - . ID=gene-NYQ15_RS03810;Name=NYQ15_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03810 NZ_CP103431.1 Protein Homology CDS 703436 703810 . - 0 ID=cds-WP_005772891.1;Parent=gene-NYQ15_RS03810;Dbxref=GenBank:WP_005772891.1;Name=WP_005772891.1;Ontology_term=GO:0000160,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819784.1;locus_tag=NYQ15_RS03810;product=response regulator;protein_id=WP_005772891.1;transl_table=11 NZ_CP103431.1 RefSeq gene 704026 704136 . + . ID=gene-NYQ15_RS03815;Name=NYQ15_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03815 NZ_CP103431.1 Protein Homology CDS 704026 704136 . + 0 ID=cds-WP_010957785.1;Parent=gene-NYQ15_RS03815;Dbxref=GenBank:WP_010957785.1;Name=WP_010957785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819785.1;locus_tag=NYQ15_RS03815;product=hypothetical protein;protein_id=WP_010957785.1;transl_table=11 NZ_CP103431.1 RefSeq gene 704129 704755 . + . ID=gene-NYQ15_RS03820;Name=NYQ15_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03820 NZ_CP103431.1 Protein Homology CDS 704129 704755 . + 0 ID=cds-WP_010957786.1;Parent=gene-NYQ15_RS03820;Dbxref=GenBank:WP_010957786.1;Name=WP_010957786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819786.1;locus_tag=NYQ15_RS03820;product=helix-turn-helix transcriptional regulator;protein_id=WP_010957786.1;transl_table=11 NZ_CP103431.1 RefSeq gene 704776 705366 . + . ID=gene-NYQ15_RS03825;Name=NYQ15_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03825 NZ_CP103431.1 Protein Homology CDS 704776 705366 . + 0 ID=cds-WP_005769002.1;Parent=gene-NYQ15_RS03825;Dbxref=GenBank:WP_005769002.1;Name=WP_005769002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819787.2;locus_tag=NYQ15_RS03825;product=hypothetical protein;protein_id=WP_005769002.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 705531 707821 . + . ID=gene-NYQ15_RS03830;Name=NYQ15_RS03830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS03830;pseudo=true NZ_CP103431.1 Protein Homology CDS 705531 707821 . + 0 ID=cds-NYQ15_RS03830;Parent=gene-NYQ15_RS03830;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020876.5;locus_tag=NYQ15_RS03830;product=acyl-CoA dehydrogenase;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 707821 708135 . + . ID=gene-NYQ15_RS03835;Name=NYQ15_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03835 NZ_CP103431.1 Protein Homology CDS 707821 708135 . + 0 ID=cds-WP_259431061.1;Parent=gene-NYQ15_RS03835;Dbxref=GenBank:WP_259431061.1;Name=WP_259431061.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.5;locus_tag=NYQ15_RS03835;product=AMP-binding protein;protein_id=WP_259431061.1;transl_table=11 NZ_CP103431.1 RefSeq gene 708068 709483 . + . ID=gene-NYQ15_RS03840;Name=NYQ15_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03840 NZ_CP103431.1 Protein Homology CDS 708068 709483 . + 0 ID=cds-WP_259411782.1;Parent=gene-NYQ15_RS03840;Dbxref=GenBank:WP_259411782.1;Name=WP_259411782.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.5;locus_tag=NYQ15_RS03840;product=AMP-binding protein;protein_id=WP_259411782.1;transl_table=11 NZ_CP103431.1 RefSeq gene 709597 711549 . - . ID=gene-NYQ15_RS03845;Name=NYQ15_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03845 NZ_CP103431.1 Protein Homology CDS 709597 711549 . - 0 ID=cds-WP_005769000.1;Parent=gene-NYQ15_RS03845;Dbxref=GenBank:WP_005769000.1;Name=WP_005769000.1;Ontology_term=GO:0019287,GO:0030729;gbkey=CDS;go_function=acetoacetate-CoA ligase activity|0030729||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819788.1;locus_tag=NYQ15_RS03845;product=acetoacetate--CoA ligase;protein_id=WP_005769000.1;transl_table=11 NZ_CP103431.1 RefSeq gene 711639 711713 . + . ID=gene-NYQ15_RS03850;Name=NYQ15_RS03850;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS03850 NZ_CP103431.1 tRNAscan-SE tRNA 711639 711713 . + . ID=rna-NYQ15_RS03850;Parent=gene-NYQ15_RS03850;anticodon=(pos:711671..711673);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS03850;product=tRNA-Val NZ_CP103431.1 tRNAscan-SE exon 711639 711713 . + . ID=exon-NYQ15_RS03850-1;Parent=rna-NYQ15_RS03850;anticodon=(pos:711671..711673);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS03850;product=tRNA-Val NZ_CP103431.1 RefSeq gene 713427 713971 . + . ID=gene-NYQ15_RS03855;Name=NYQ15_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03855;partial=true;start_range=.,713427 NZ_CP103431.1 Protein Homology CDS 713427 713971 . + 2 ID=cds-WP_259411783.1;Parent=gene-NYQ15_RS03855;Dbxref=GenBank:WP_259411783.1;Name=WP_259411783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819790.2;locus_tag=NYQ15_RS03855;partial=true;product=dipeptidase;protein_id=WP_259411783.1;start_range=.,713427;transl_table=11 NZ_CP103431.1 RefSeq gene 714071 714757 . + . ID=gene-NYQ15_RS03860;Name=NYQ15_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03860 NZ_CP103431.1 Protein Homology CDS 714071 714757 . + 0 ID=cds-WP_005768978.1;Parent=gene-NYQ15_RS03860;Dbxref=GenBank:WP_005768978.1;Name=WP_005768978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819791.1;locus_tag=NYQ15_RS03860;product=glutamine amidotransferase-related protein;protein_id=WP_005768978.1;transl_table=11 NZ_CP103431.1 RefSeq gene 714924 716189 . + . ID=gene-NYQ15_RS03865;Name=NYQ15_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03865 NZ_CP103431.1 Protein Homology CDS 714924 716189 . + 0 ID=cds-WP_259431062.1;Parent=gene-NYQ15_RS03865;Dbxref=GenBank:WP_259431062.1;Name=WP_259431062.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819792.2;locus_tag=NYQ15_RS03865;product=ATP-binding protein;protein_id=WP_259431062.1;transl_table=11 NZ_CP103431.1 RefSeq gene 716361 717233 . + . ID=gene-NYQ15_RS03870;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=NYQ15_RS03870 NZ_CP103431.1 Protein Homology CDS 716361 717233 . + 0 ID=cds-WP_005768975.1;Parent=gene-NYQ15_RS03870;Dbxref=GenBank:WP_005768975.1;Name=WP_005768975.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819793.1;locus_tag=NYQ15_RS03870;product=methylisocitrate lyase;protein_id=WP_005768975.1;transl_table=11 NZ_CP103431.1 RefSeq gene 717226 718344 . + . ID=gene-NYQ15_RS03875;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=NYQ15_RS03875 NZ_CP103431.1 Protein Homology CDS 717226 718344 . + 0 ID=cds-WP_005768973.1;Parent=gene-NYQ15_RS03875;Dbxref=GenBank:WP_005768973.1;Name=WP_005768973.1;Ontology_term=GO:0050440;gbkey=CDS;gene=prpC;go_function=2-methylcitrate synthase activity|0050440||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819794.1;locus_tag=NYQ15_RS03875;product=2-methylcitrate synthase;protein_id=WP_005768973.1;transl_table=11 NZ_CP103431.1 RefSeq gene 718347 718817 . + . ID=gene-NYQ15_RS03880;Name=phnB;gbkey=Gene;gene=phnB;gene_biotype=protein_coding;locus_tag=NYQ15_RS03880 NZ_CP103431.1 Protein Homology CDS 718347 718817 . + 0 ID=cds-WP_005768971.1;Parent=gene-NYQ15_RS03880;Dbxref=GenBank:WP_005768971.1;Name=WP_005768971.1;gbkey=CDS;gene=phnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819795.1;locus_tag=NYQ15_RS03880;product=Dot/Icm type IV secretion system effector PhnB;protein_id=WP_005768971.1;transl_table=11 NZ_CP103431.1 RefSeq gene 718946 719194 . + . ID=gene-NYQ15_RS03885;Name=NYQ15_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03885 NZ_CP103431.1 Protein Homology CDS 718946 719194 . + 0 ID=cds-WP_005768969.1;Parent=gene-NYQ15_RS03885;Dbxref=GenBank:WP_005768969.1;Name=WP_005768969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819796.1;locus_tag=NYQ15_RS03885;product=PspC domain-containing protein;protein_id=WP_005768969.1;transl_table=11 NZ_CP103431.1 RefSeq gene 719201 719542 . + . ID=gene-NYQ15_RS03890;Name=NYQ15_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03890 NZ_CP103431.1 Protein Homology CDS 719201 719542 . + 0 ID=cds-WP_005768967.1;Parent=gene-NYQ15_RS03890;Dbxref=GenBank:WP_005768967.1;Name=WP_005768967.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819797.1;locus_tag=NYQ15_RS03890;product=GntR family transcriptional regulator;protein_id=WP_005768967.1;transl_table=11 NZ_CP103431.1 RefSeq gene 719539 720390 . + . ID=gene-NYQ15_RS03895;Name=NYQ15_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03895 NZ_CP103431.1 Protein Homology CDS 719539 720390 . + 0 ID=cds-WP_032074870.1;Parent=gene-NYQ15_RS03895;Dbxref=GenBank:WP_032074870.1;Name=WP_032074870.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819798.1;locus_tag=NYQ15_RS03895;product=ABC transporter ATP-binding protein;protein_id=WP_032074870.1;transl_table=11 NZ_CP103431.1 RefSeq gene 720387 721301 . + . ID=gene-NYQ15_RS03900;Name=NYQ15_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03900 NZ_CP103431.1 Protein Homology CDS 720387 721301 . + 0 ID=cds-WP_005768963.1;Parent=gene-NYQ15_RS03900;Dbxref=GenBank:WP_005768963.1;Name=WP_005768963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819799.2;locus_tag=NYQ15_RS03900;product=ABC transporter permease;protein_id=WP_005768963.1;transl_table=11 NZ_CP103431.1 RefSeq gene 721317 721835 . - . ID=gene-NYQ15_RS03905;Name=NYQ15_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03905 NZ_CP103431.1 Protein Homology CDS 721317 721835 . - 0 ID=cds-WP_005768961.1;Parent=gene-NYQ15_RS03905;Dbxref=GenBank:WP_005768961.1;Name=WP_005768961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768961.1;locus_tag=NYQ15_RS03905;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_005768961.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 721873 722270 . - . ID=gene-NYQ15_RS03910;Name=NYQ15_RS03910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS03910;pseudo=true NZ_CP103431.1 Protein Homology CDS 721873 722270 . - 0 ID=cds-NYQ15_RS03910;Parent=gene-NYQ15_RS03910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332976.1;locus_tag=NYQ15_RS03910;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 722476 723126 . + . ID=gene-NYQ15_RS03915;Name=NYQ15_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03915 NZ_CP103431.1 Protein Homology CDS 722476 723126 . + 0 ID=cds-WP_005768956.1;Parent=gene-NYQ15_RS03915;Dbxref=GenBank:WP_005768956.1;Name=WP_005768956.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819801.1;locus_tag=NYQ15_RS03915;product=response regulator;protein_id=WP_005768956.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 723191 724208 . + . ID=gene-NYQ15_RS03920;Name=ankG;gbkey=Gene;gene=ankG;gene_biotype=pseudogene;locus_tag=NYQ15_RS03920;pseudo=true NZ_CP103431.1 Protein Homology CDS 723191 724208 . + 0 ID=cds-NYQ15_RS03920;Parent=gene-NYQ15_RS03920;Note=frameshifted;gbkey=CDS;gene=ankG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819802.1;locus_tag=NYQ15_RS03920;product=ankyrin repeat domain-containing T4SS effector AnkG;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 724408 725796 . + . ID=gene-NYQ15_RS03925;Name=NYQ15_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03925 NZ_CP103431.1 Protein Homology CDS 724408 725796 . + 0 ID=cds-WP_259431063.1;Parent=gene-NYQ15_RS03925;Dbxref=GenBank:WP_259431063.1;Name=WP_259431063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819803.1;locus_tag=NYQ15_RS03925;product=hypothetical protein;protein_id=WP_259431063.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 725813 726720 . - . ID=gene-NYQ15_RS10575;Name=bla;gbkey=Gene;gene=bla;gene_biotype=pseudogene;locus_tag=NYQ15_RS10575;pseudo=true NZ_CP103431.1 Protein Homology CDS 725813 726720 . - 0 ID=cds-NYQ15_RS10575;Parent=gene-NYQ15_RS10575;Note=frameshifted;Ontology_term=GO:0030655,GO:0046677,GO:0008800;gbkey=CDS;gene=bla;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032492044.1;locus_tag=NYQ15_RS10575;product=class A beta-lactamase;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 726928 727035 . + . ID=gene-NYQ15_RS03945;Name=NYQ15_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03945 NZ_CP103431.1 Protein Homology CDS 726928 727035 . + 0 ID=cds-WP_010957799.1;Parent=gene-NYQ15_RS03945;Dbxref=GenBank:WP_010957799.1;Name=WP_010957799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819804.1;locus_tag=NYQ15_RS03945;product=hypothetical protein;protein_id=WP_010957799.1;transl_table=11 NZ_CP103431.1 RefSeq gene 727305 728477 . + . ID=gene-NYQ15_RS03950;Name=NYQ15_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03950 NZ_CP103431.1 Protein Homology CDS 727305 728477 . + 0 ID=cds-WP_259431065.1;Parent=gene-NYQ15_RS03950;Dbxref=GenBank:WP_259431065.1;Name=WP_259431065.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819806.2;locus_tag=NYQ15_RS03950;product=CoA transferase;protein_id=WP_259431065.1;transl_table=11 NZ_CP103431.1 RefSeq gene 728511 730055 . + . ID=gene-NYQ15_RS03955;Name=NYQ15_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03955 NZ_CP103431.1 Protein Homology CDS 728511 730055 . + 0 ID=cds-WP_005772586.1;Parent=gene-NYQ15_RS03955;Dbxref=GenBank:WP_005772586.1;Name=WP_005772586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819807.2;locus_tag=NYQ15_RS03955;product=amino acid adenylation domain-containing protein;protein_id=WP_005772586.1;transl_table=11 NZ_CP103431.1 RefSeq gene 730045 734883 . + . ID=gene-NYQ15_RS03960;Name=NYQ15_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03960 NZ_CP103431.1 Protein Homology CDS 730045 734883 . + 0 ID=cds-WP_005772579.1;Parent=gene-NYQ15_RS03960;Dbxref=GenBank:WP_005772579.1;Name=WP_005772579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819808.1;locus_tag=NYQ15_RS03960;product=type I polyketide synthase;protein_id=WP_005772579.1;transl_table=11 NZ_CP103431.1 RefSeq gene 734999 737494 . + . ID=gene-NYQ15_RS03965;Name=NYQ15_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03965 NZ_CP103431.1 Protein Homology CDS 734999 737494 . + 0 ID=cds-WP_259431066.1;Parent=gene-NYQ15_RS03965;Dbxref=GenBank:WP_259431066.1;Name=WP_259431066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819809.2;locus_tag=NYQ15_RS03965;product=PAS domain-containing hybrid sensor histidine kinase/response regulator;protein_id=WP_259431066.1;transl_table=11 NZ_CP103431.1 RefSeq gene 737744 737986 . + . ID=gene-NYQ15_RS03970;Name=NYQ15_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03970 NZ_CP103431.1 Protein Homology CDS 737744 737986 . + 0 ID=cds-WP_005768943.1;Parent=gene-NYQ15_RS03970;Dbxref=GenBank:WP_005768943.1;Name=WP_005768943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772583.1;locus_tag=NYQ15_RS03970;product=hypothetical protein;protein_id=WP_005768943.1;transl_table=11 NZ_CP103431.1 RefSeq gene 738140 738604 . + . ID=gene-NYQ15_RS03975;Name=NYQ15_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03975 NZ_CP103431.1 Protein Homology CDS 738140 738604 . + 0 ID=cds-WP_143433530.1;Parent=gene-NYQ15_RS03975;Dbxref=GenBank:WP_143433530.1;Name=WP_143433530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768942.1;locus_tag=NYQ15_RS03975;product=hypothetical protein;protein_id=WP_143433530.1;transl_table=11 NZ_CP103431.1 RefSeq gene 743561 744710 . - . ID=gene-NYQ15_RS03980;Name=coxCC4;gbkey=Gene;gene=coxCC4;gene_biotype=protein_coding;locus_tag=NYQ15_RS03980;partial=true;start_range=.,743561 NZ_CP103431.1 Protein Homology CDS 743561 744710 . - 0 ID=cds-WP_259431067.1;Parent=gene-NYQ15_RS03980;Dbxref=GenBank:WP_259431067.1;Name=WP_259431067.1;gbkey=CDS;gene=coxCC4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819814.1;locus_tag=NYQ15_RS03980;partial=true;product=Dot/Icm T4SS effector CoxCC4;protein_id=WP_259431067.1;start_range=.,743561;transl_table=11 NZ_CP103431.1 RefSeq gene 745029 745115 . - . ID=gene-NYQ15_RS03985;Name=NYQ15_RS03985;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS03985 NZ_CP103431.1 tRNAscan-SE tRNA 745029 745115 . - . ID=rna-NYQ15_RS03985;Parent=gene-NYQ15_RS03985;anticodon=(pos:complement(745079..745081));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS03985;product=tRNA-Leu NZ_CP103431.1 tRNAscan-SE exon 745029 745115 . - . ID=exon-NYQ15_RS03985-1;Parent=rna-NYQ15_RS03985;anticodon=(pos:complement(745079..745081));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS03985;product=tRNA-Leu NZ_CP103431.1 RefSeq gene 745146 745712 . - . ID=gene-NYQ15_RS03990;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=NYQ15_RS03990 NZ_CP103431.1 Protein Homology CDS 745146 745712 . - 0 ID=cds-WP_080592755.1;Parent=gene-NYQ15_RS03990;Dbxref=GenBank:WP_080592755.1;Name=WP_080592755.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819815.2;locus_tag=NYQ15_RS03990;product=GTP cyclohydrolase I FolE;protein_id=WP_080592755.1;transl_table=11 NZ_CP103431.1 RefSeq gene 745712 746053 . - . ID=gene-NYQ15_RS03995;Name=NYQ15_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS03995 NZ_CP103431.1 Protein Homology CDS 745712 746053 . - 0 ID=cds-WP_005768932.1;Parent=gene-NYQ15_RS03995;Dbxref=GenBank:WP_005768932.1;Name=WP_005768932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819816.1;locus_tag=NYQ15_RS03995;product=histidine triad nucleotide-binding protein;protein_id=WP_005768932.1;transl_table=11 NZ_CP103431.1 RefSeq gene 746070 747650 . - . ID=gene-NYQ15_RS04000;Name=NYQ15_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04000 NZ_CP103431.1 Protein Homology CDS 746070 747650 . - 0 ID=cds-WP_098953056.1;Parent=gene-NYQ15_RS04000;Dbxref=GenBank:WP_098953056.1;Name=WP_098953056.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819817.1;locus_tag=NYQ15_RS04000;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_098953056.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 747651 748645 . - . ID=gene-NYQ15_RS04005;Name=NYQ15_RS04005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS04005;pseudo=true NZ_CP103431.1 Protein Homology CDS 747651 748645 . - 0 ID=cds-NYQ15_RS04005;Parent=gene-NYQ15_RS04005;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819818.1;locus_tag=NYQ15_RS04005;product=HlyD family secretion protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 748669 748794 . + . ID=gene-NYQ15_RS04010;Name=NYQ15_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04010 NZ_CP103431.1 Protein Homology CDS 748669 748794 . + 0 ID=cds-WP_005768929.1;Parent=gene-NYQ15_RS04010;Dbxref=GenBank:WP_005768929.1;Name=WP_005768929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819819.1;locus_tag=NYQ15_RS04010;product=hypothetical protein;protein_id=WP_005768929.1;transl_table=11 NZ_CP103431.1 RefSeq gene 748791 749204 . + . ID=gene-NYQ15_RS04015;Name=NYQ15_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04015 NZ_CP103431.1 Protein Homology CDS 748791 749204 . + 0 ID=cds-WP_012570695.1;Parent=gene-NYQ15_RS04015;Dbxref=GenBank:WP_012570695.1;Name=WP_012570695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819820.1;locus_tag=NYQ15_RS04015;product=hypothetical protein;protein_id=WP_012570695.1;transl_table=11 NZ_CP103431.1 RefSeq gene 749201 749638 . + . ID=gene-NYQ15_RS04020;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;gene_synonym=coxH2;locus_tag=NYQ15_RS04020 NZ_CP103431.1 Protein Homology CDS 749201 749638 . + 0 ID=cds-WP_005768924.1;Parent=gene-NYQ15_RS04020;Dbxref=GenBank:WP_005768924.1;Name=WP_005768924.1;gbkey=CDS;gene=rimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819821.1;locus_tag=NYQ15_RS04020;product=ribosomal protein S18-alanine N-acetyltransferase RimI/CoxH2;protein_id=WP_005768924.1;transl_table=11 NZ_CP103431.1 RefSeq gene 749659 750465 . - . ID=gene-NYQ15_RS04025;Name=NYQ15_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04025 NZ_CP103431.1 Protein Homology CDS 749659 750465 . - 0 ID=cds-WP_012570696.1;Parent=gene-NYQ15_RS04025;Dbxref=GenBank:WP_012570696.1;Name=WP_012570696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819822.2;locus_tag=NYQ15_RS04025;product=hypothetical protein;protein_id=WP_012570696.1;transl_table=11 NZ_CP103431.1 RefSeq gene 750643 751698 . + . ID=gene-NYQ15_RS04030;Name=NYQ15_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04030 NZ_CP103431.1 Protein Homology CDS 750643 751698 . + 0 ID=cds-WP_005768920.1;Parent=gene-NYQ15_RS04030;Dbxref=GenBank:WP_005768920.1;Name=WP_005768920.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819823.1;locus_tag=NYQ15_RS04030;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_005768920.1;transl_table=11 NZ_CP103431.1 RefSeq gene 751706 754744 . + . ID=gene-NYQ15_RS04035;Name=NYQ15_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04035 NZ_CP103431.1 Protein Homology CDS 751706 754744 . + 0 ID=cds-WP_259431068.1;Parent=gene-NYQ15_RS04035;Dbxref=GenBank:WP_259431068.1;Name=WP_259431068.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819824.1;locus_tag=NYQ15_RS04035;product=efflux RND transporter permease subunit;protein_id=WP_259431068.1;transl_table=11 NZ_CP103431.1 RefSeq gene 755108 755218 . - . ID=gene-NYQ15_RS04040;Name=NYQ15_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04040 NZ_CP103431.1 Protein Homology CDS 755108 755218 . - 0 ID=cds-WP_010957815.1;Parent=gene-NYQ15_RS04040;Dbxref=GenBank:WP_010957815.1;Name=WP_010957815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819825.2;locus_tag=NYQ15_RS04040;product=hypothetical protein;protein_id=WP_010957815.1;transl_table=11 NZ_CP103431.1 RefSeq gene 755322 755429 . - . ID=gene-NYQ15_RS04045;Name=NYQ15_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04045 NZ_CP103431.1 Protein Homology CDS 755322 755429 . - 0 ID=cds-WP_010957816.1;Parent=gene-NYQ15_RS04045;Dbxref=GenBank:WP_010957816.1;Name=WP_010957816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819826.1;locus_tag=NYQ15_RS04045;product=hypothetical protein;protein_id=WP_010957816.1;transl_table=11 NZ_CP103431.1 RefSeq gene 755487 756626 . + . ID=gene-NYQ15_RS04050;Name=NYQ15_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04050 NZ_CP103431.1 Protein Homology CDS 755487 756626 . + 0 ID=cds-WP_005768917.1;Parent=gene-NYQ15_RS04050;Dbxref=GenBank:WP_005768917.1;Name=WP_005768917.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819827.1;locus_tag=NYQ15_RS04050;product=serine hydrolase;protein_id=WP_005768917.1;transl_table=11 NZ_CP103431.1 RefSeq gene 756658 759420 . - . ID=gene-NYQ15_RS04055;Name=NYQ15_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04055 NZ_CP103431.1 Protein Homology CDS 756658 759420 . - 0 ID=cds-WP_098953057.1;Parent=gene-NYQ15_RS04055;Dbxref=GenBank:WP_098953057.1;Name=WP_098953057.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819828.1;locus_tag=NYQ15_RS04055;product=valine--tRNA ligase;protein_id=WP_098953057.1;transl_table=11 NZ_CP103431.1 RefSeq gene 759557 760675 . + . ID=gene-NYQ15_RS04060;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=NYQ15_RS04060 NZ_CP103431.1 Protein Homology CDS 759557 760675 . + 0 ID=cds-WP_259431069.1;Parent=gene-NYQ15_RS04060;Dbxref=GenBank:WP_259431069.1;Name=WP_259431069.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819829.2;locus_tag=NYQ15_RS04060;product=LPS export ABC transporter permease LptF;protein_id=WP_259431069.1;transl_table=11 NZ_CP103431.1 RefSeq gene 760663 761730 . + . ID=gene-NYQ15_RS04065;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=NYQ15_RS04065 NZ_CP103431.1 Protein Homology CDS 760663 761730 . + 0 ID=cds-WP_005768910.1;Parent=gene-NYQ15_RS04065;Dbxref=GenBank:WP_005768910.1;Name=WP_005768910.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819830.1;locus_tag=NYQ15_RS04065;product=LPS export ABC transporter permease LptG;protein_id=WP_005768910.1;transl_table=11 NZ_CP103431.1 RefSeq gene 761731 763308 . + . ID=gene-NYQ15_RS04070;Name=NYQ15_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04070 NZ_CP103431.1 Protein Homology CDS 761731 763308 . + 0 ID=cds-WP_005772589.1;Parent=gene-NYQ15_RS04070;Dbxref=GenBank:WP_005772589.1;Name=WP_005772589.1;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819831.1;locus_tag=NYQ15_RS04070;product=peptide chain release factor 3;protein_id=WP_005772589.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 763323 764681 . + . ID=gene-NYQ15_RS04075;Name=NYQ15_RS04075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS04075;pseudo=true NZ_CP103431.1 Protein Homology CDS 763323 764681 . + 0 ID=cds-NYQ15_RS04075;Parent=gene-NYQ15_RS04075;Note=frameshifted;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819832.1;locus_tag=NYQ15_RS04075;product=MATE family efflux transporter;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 764969 765427 . + . ID=gene-NYQ15_RS04085;Name=NYQ15_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04085 NZ_CP103431.1 Protein Homology CDS 764969 765427 . + 0 ID=cds-WP_005768908.1;Parent=gene-NYQ15_RS04085;Dbxref=GenBank:WP_005768908.1;Name=WP_005768908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819833.1;locus_tag=NYQ15_RS04085;product=DUF4145 domain-containing protein;protein_id=WP_005768908.1;transl_table=11 NZ_CP103431.1 RefSeq gene 765811 767664 . + . ID=gene-NYQ15_RS04090;Name=coxU1;gbkey=Gene;gene=coxU1;gene_biotype=protein_coding;locus_tag=NYQ15_RS04090 NZ_CP103431.1 Protein Homology CDS 765811 767664 . + 0 ID=cds-WP_012570698.1;Parent=gene-NYQ15_RS04090;Dbxref=GenBank:WP_012570698.1;Name=WP_012570698.1;gbkey=CDS;gene=coxU1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570698.1;locus_tag=NYQ15_RS04090;product=Dot/Icm T4SS effector CoxU1;protein_id=WP_012570698.1;transl_table=11 NZ_CP103431.1 RefSeq gene 767694 768260 . - . ID=gene-NYQ15_RS04095;Name=NYQ15_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04095 NZ_CP103431.1 Protein Homology CDS 767694 768260 . - 0 ID=cds-WP_005768905.1;Parent=gene-NYQ15_RS04095;Dbxref=GenBank:WP_005768905.1;Name=WP_005768905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768905.1;locus_tag=NYQ15_RS04095;product=GNAT family N-acetyltransferase;protein_id=WP_005768905.1;transl_table=11 NZ_CP103431.1 RefSeq gene 768510 769091 . + . ID=gene-NYQ15_RS04100;Name=NYQ15_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04100 NZ_CP103431.1 Protein Homology CDS 768510 769091 . + 0 ID=cds-WP_005768904.1;Parent=gene-NYQ15_RS04100;Dbxref=GenBank:WP_005768904.1;Name=WP_005768904.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819838.1;locus_tag=NYQ15_RS04100;product=TetR/AcrR family transcriptional regulator;protein_id=WP_005768904.1;transl_table=11 NZ_CP103431.1 RefSeq gene 769148 769822 . + . ID=gene-NYQ15_RS04105;Name=NYQ15_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04105 NZ_CP103431.1 Protein Homology CDS 769148 769822 . + 0 ID=cds-WP_005768903.1;Parent=gene-NYQ15_RS04105;Dbxref=GenBank:WP_005768903.1;Name=WP_005768903.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819839.1;locus_tag=NYQ15_RS04105;product=glutathione S-transferase family protein;protein_id=WP_005768903.1;transl_table=11 NZ_CP103431.1 RefSeq gene 769896 771227 . + . ID=gene-NYQ15_RS04110;Name=NYQ15_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04110 NZ_CP103431.1 Protein Homology CDS 769896 771227 . + 0 ID=cds-WP_098953058.1;Parent=gene-NYQ15_RS04110;Dbxref=GenBank:WP_098953058.1;Name=WP_098953058.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768902.1;locus_tag=NYQ15_RS04110;product=leucine-rich repeat domain-containing protein;protein_id=WP_098953058.1;transl_table=11 NZ_CP103431.1 RefSeq gene 771292 772428 . - . ID=gene-NYQ15_RS04115;Name=NYQ15_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04115 NZ_CP103431.1 Protein Homology CDS 771292 772428 . - 0 ID=cds-WP_259431070.1;Parent=gene-NYQ15_RS04115;Dbxref=GenBank:WP_259431070.1;Name=WP_259431070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819842.1;locus_tag=NYQ15_RS04115;product=Fic family protein;protein_id=WP_259431070.1;transl_table=11 NZ_CP103431.1 RefSeq gene 772874 774571 . - . ID=gene-NYQ15_RS04120;Name=NYQ15_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04120 NZ_CP103431.1 Protein Homology CDS 772874 774571 . - 0 ID=cds-WP_005772521.1;Parent=gene-NYQ15_RS04120;Dbxref=GenBank:WP_005772521.1;Name=WP_005772521.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819843.1;locus_tag=NYQ15_RS04120;product=NAD-dependent malic enzyme;protein_id=WP_005772521.1;transl_table=11 NZ_CP103431.1 RefSeq gene 774599 775984 . - . ID=gene-NYQ15_RS04125;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=NYQ15_RS04125 NZ_CP103431.1 Protein Homology CDS 774599 775984 . - 0 ID=cds-WP_005768896.1;Parent=gene-NYQ15_RS04125;Dbxref=GenBank:WP_005768896.1;Name=WP_005768896.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819844.1;locus_tag=NYQ15_RS04125;product=adenylosuccinate lyase;protein_id=WP_005768896.1;transl_table=11 NZ_CP103431.1 RefSeq gene 776088 777197 . + . ID=gene-NYQ15_RS04130;Name=NYQ15_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04130 NZ_CP103431.1 Protein Homology CDS 776088 777197 . + 0 ID=cds-WP_005768894.1;Parent=gene-NYQ15_RS04130;Dbxref=GenBank:WP_005768894.1;Name=WP_005768894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819845.1;locus_tag=NYQ15_RS04130;product=DegT/DnrJ/EryC1/StrS aminotransferase family protein;protein_id=WP_005768894.1;transl_table=11 NZ_CP103431.1 RefSeq gene 777184 777687 . + . ID=gene-NYQ15_RS04135;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=NYQ15_RS04135 NZ_CP103431.1 Protein Homology CDS 777184 777687 . + 0 ID=cds-WP_005768892.1;Parent=gene-NYQ15_RS04135;Dbxref=GenBank:WP_005768892.1;Name=WP_005768892.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819846.1;locus_tag=NYQ15_RS04135;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_005768892.1;transl_table=11 NZ_CP103431.1 RefSeq gene 777722 778318 . + . ID=gene-NYQ15_RS04140;Name=NYQ15_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04140 NZ_CP103431.1 Protein Homology CDS 777722 778318 . + 0 ID=cds-WP_010957830.1;Parent=gene-NYQ15_RS04140;Dbxref=GenBank:WP_010957830.1;Name=WP_010957830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819847.1;locus_tag=NYQ15_RS04140;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_010957830.1;transl_table=11 NZ_CP103431.1 RefSeq gene 778395 779948 . + . ID=gene-NYQ15_RS04145;Name=NYQ15_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04145 NZ_CP103431.1 Protein Homology CDS 778395 779948 . + 0 ID=cds-WP_005768889.1;Parent=gene-NYQ15_RS04145;Dbxref=GenBank:WP_005768889.1;Name=WP_005768889.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819848.1;locus_tag=NYQ15_RS04145;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_005768889.1;transl_table=11 NZ_CP103431.1 RefSeq gene 779963 780958 . + . ID=gene-NYQ15_RS04150;Name=NYQ15_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04150 NZ_CP103431.1 Protein Homology CDS 779963 780958 . + 0 ID=cds-WP_080592751.1;Parent=gene-NYQ15_RS04150;Dbxref=GenBank:WP_080592751.1;Name=WP_080592751.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819849.2;locus_tag=NYQ15_RS04150;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_080592751.1;transl_table=11 NZ_CP103431.1 RefSeq gene 780955 782109 . + . ID=gene-NYQ15_RS04155;Name=NYQ15_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04155 NZ_CP103431.1 Protein Homology CDS 780955 782109 . + 0 ID=cds-WP_040070625.1;Parent=gene-NYQ15_RS04155;Dbxref=GenBank:WP_040070625.1;Name=WP_040070625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819850.1;locus_tag=NYQ15_RS04155;product=DegT/DnrJ/EryC1/StrS aminotransferase family protein;protein_id=WP_040070625.1;transl_table=11 NZ_CP103431.1 RefSeq gene 782112 784010 . + . ID=gene-NYQ15_RS04160;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=NYQ15_RS04160 NZ_CP103431.1 Protein Homology CDS 782112 784010 . + 0 ID=cds-WP_005772517.1;Parent=gene-NYQ15_RS04160;Dbxref=GenBank:WP_005772517.1;Name=WP_005772517.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819851.1;locus_tag=NYQ15_RS04160;product=asparagine synthase (glutamine-hydrolyzing);protein_id=WP_005772517.1;transl_table=11 NZ_CP103431.1 RefSeq gene 784011 784562 . + . ID=gene-NYQ15_RS04165;Name=NYQ15_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04165 NZ_CP103431.1 Protein Homology CDS 784011 784562 . + 0 ID=cds-WP_005772507.1;Parent=gene-NYQ15_RS04165;Dbxref=GenBank:WP_005772507.1;Name=WP_005772507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819852.1;locus_tag=NYQ15_RS04165;product=acyltransferase;protein_id=WP_005772507.1;transl_table=11 NZ_CP103431.1 RefSeq gene 784573 786378 . + . ID=gene-NYQ15_RS04170;Name=NYQ15_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04170 NZ_CP103431.1 Protein Homology CDS 784573 786378 . + 0 ID=cds-WP_259431071.1;Parent=gene-NYQ15_RS04170;Dbxref=GenBank:WP_259431071.1;Name=WP_259431071.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819853.1;locus_tag=NYQ15_RS04170;product=ABC transporter ATP-binding protein;protein_id=WP_259431071.1;transl_table=11 NZ_CP103431.1 RefSeq gene 786391 787377 . + . ID=gene-NYQ15_RS04175;Name=NYQ15_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04175 NZ_CP103431.1 Protein Homology CDS 786391 787377 . + 0 ID=cds-WP_011996818.1;Parent=gene-NYQ15_RS04175;Dbxref=GenBank:WP_011996818.1;Name=WP_011996818.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819854.1;locus_tag=NYQ15_RS04175;product=class I SAM-dependent methyltransferase;protein_id=WP_011996818.1;transl_table=11 NZ_CP103431.1 RefSeq gene 787386 787655 . + . ID=gene-NYQ15_RS04180;Name=NYQ15_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04180 NZ_CP103431.1 Protein Homology CDS 787386 787655 . + 0 ID=cds-WP_005768876.1;Parent=gene-NYQ15_RS04180;Dbxref=GenBank:WP_005768876.1;Name=WP_005768876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819855.1;locus_tag=NYQ15_RS04180;product=hypothetical protein;protein_id=WP_005768876.1;transl_table=11 NZ_CP103431.1 RefSeq gene 787659 788735 . + . ID=gene-NYQ15_RS04185;Name=NYQ15_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04185 NZ_CP103431.1 Protein Homology CDS 787659 788735 . + 0 ID=cds-WP_040070629.1;Parent=gene-NYQ15_RS04185;Dbxref=GenBank:WP_040070629.1;Name=WP_040070629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819856.2;locus_tag=NYQ15_RS04185;product=radical SAM protein;protein_id=WP_040070629.1;transl_table=11 NZ_CP103431.1 RefSeq gene 788750 790234 . + . ID=gene-NYQ15_RS04190;Name=NYQ15_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04190 NZ_CP103431.1 Protein Homology CDS 788750 790234 . + 0 ID=cds-WP_259431072.1;Parent=gene-NYQ15_RS04190;Dbxref=GenBank:WP_259431072.1;Name=WP_259431072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819857.1;locus_tag=NYQ15_RS04190;product=hypothetical protein;protein_id=WP_259431072.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 790385 790450 . + . ID=gene-NYQ15_RS04195;Name=NYQ15_RS04195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS04195;partial=true;pseudo=true;start_range=.,790385 NZ_CP103431.1 Protein Homology CDS 790385 790450 . + 0 ID=cds-NYQ15_RS04195;Parent=gene-NYQ15_RS04195;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820693.1;locus_tag=NYQ15_RS04195;partial=true;product=GIY-YIG nuclease family protein;pseudo=true;start_range=.,790385;transl_table=11 NZ_CP103431.1 RefSeq gene 790521 791621 . + . ID=gene-NYQ15_RS04200;Name=NYQ15_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04200 NZ_CP103431.1 Protein Homology CDS 790521 791621 . + 0 ID=cds-WP_005772519.1;Parent=gene-NYQ15_RS04200;Dbxref=GenBank:WP_005772519.1;Name=WP_005772519.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819858.2;locus_tag=NYQ15_RS04200;product=glycosyltransferase;protein_id=WP_005772519.1;transl_table=11 NZ_CP103431.1 RefSeq gene 791757 793049 . + . ID=gene-NYQ15_RS04205;Name=NYQ15_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04205 NZ_CP103431.1 Protein Homology CDS 791757 793049 . + 0 ID=cds-WP_032074887.1;Parent=gene-NYQ15_RS04205;Dbxref=GenBank:WP_032074887.1;Name=WP_032074887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819859.1;locus_tag=NYQ15_RS04205;product=glycosyltransferase;protein_id=WP_032074887.1;transl_table=11 NZ_CP103431.1 RefSeq gene 793049 794962 . + . ID=gene-NYQ15_RS04210;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=NYQ15_RS04210 NZ_CP103431.1 Protein Homology CDS 793049 794962 . + 0 ID=cds-WP_005768865.1;Parent=gene-NYQ15_RS04210;Dbxref=GenBank:WP_005768865.1;Name=WP_005768865.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819860.1;locus_tag=NYQ15_RS04210;product=asparagine synthase (glutamine-hydrolyzing);protein_id=WP_005768865.1;transl_table=11 NZ_CP103431.1 RefSeq gene 794969 796102 . + . ID=gene-NYQ15_RS04215;Name=NYQ15_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04215 NZ_CP103431.1 Protein Homology CDS 794969 796102 . + 0 ID=cds-WP_005768863.1;Parent=gene-NYQ15_RS04215;Dbxref=GenBank:WP_005768863.1;Name=WP_005768863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819861.1;locus_tag=NYQ15_RS04215;product=glycosyltransferase family 4 protein;protein_id=WP_005768863.1;transl_table=11 NZ_CP103431.1 RefSeq gene 796333 797430 . + . ID=gene-NYQ15_RS04220;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=NYQ15_RS04220 NZ_CP103431.1 Protein Homology CDS 796333 797430 . + 0 ID=cds-WP_005772515.1;Parent=gene-NYQ15_RS04220;Dbxref=GenBank:WP_005772515.1;Name=WP_005772515.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819862.1;locus_tag=NYQ15_RS04220;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_005772515.1;transl_table=11 NZ_CP103431.1 RefSeq gene 797441 798598 . + . ID=gene-NYQ15_RS04225;Name=NYQ15_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04225 NZ_CP103431.1 Protein Homology CDS 797441 798598 . + 0 ID=cds-WP_005768860.1;Parent=gene-NYQ15_RS04225;Dbxref=GenBank:WP_005768860.1;Name=WP_005768860.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819863.2;locus_tag=NYQ15_RS04225;product=glycosyltransferase family 4 protein;protein_id=WP_005768860.1;transl_table=11 NZ_CP103431.1 RefSeq gene 798603 799622 . - . ID=gene-NYQ15_RS04230;Name=NYQ15_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04230 NZ_CP103431.1 Protein Homology CDS 798603 799622 . - 0 ID=cds-WP_012570704.1;Parent=gene-NYQ15_RS04230;Dbxref=GenBank:WP_012570704.1;Name=WP_012570704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819864.2;locus_tag=NYQ15_RS04230;product=NAD-dependent epimerase;protein_id=WP_012570704.1;transl_table=11 NZ_CP103431.1 RefSeq gene 799610 800899 . - . ID=gene-NYQ15_RS04235;Name=NYQ15_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04235 NZ_CP103431.1 Protein Homology CDS 799610 800899 . - 0 ID=cds-WP_005768856.1;Parent=gene-NYQ15_RS04235;Dbxref=GenBank:WP_005768856.1;Name=WP_005768856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819865.1;locus_tag=NYQ15_RS04235;product=nucleotide sugar dehydrogenase;protein_id=WP_005768856.1;transl_table=11 NZ_CP103431.1 RefSeq gene 800957 802306 . + . ID=gene-NYQ15_RS04240;Name=NYQ15_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04240 NZ_CP103431.1 Protein Homology CDS 800957 802306 . + 0 ID=cds-WP_005768853.1;Parent=gene-NYQ15_RS04240;Dbxref=GenBank:WP_005768853.1;Name=WP_005768853.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819866.1;locus_tag=NYQ15_RS04240;product=UDP-glucose/GDP-mannose dehydrogenase family protein;protein_id=WP_005768853.1;transl_table=11 NZ_CP103431.1 RefSeq gene 802320 803084 . + . ID=gene-NYQ15_RS04245;Name=NYQ15_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04245 NZ_CP103431.1 Protein Homology CDS 802320 803084 . + 0 ID=cds-WP_005768851.1;Parent=gene-NYQ15_RS04245;Dbxref=GenBank:WP_005768851.1;Name=WP_005768851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819867.1;locus_tag=NYQ15_RS04245;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_005768851.1;transl_table=11 NZ_CP103431.1 RefSeq gene 803094 804737 . + . ID=gene-NYQ15_RS04250;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=NYQ15_RS04250 NZ_CP103431.1 Protein Homology CDS 803094 804737 . + 0 ID=cds-WP_005768849.1;Parent=gene-NYQ15_RS04250;Dbxref=GenBank:WP_005768849.1;Name=WP_005768849.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819868.1;locus_tag=NYQ15_RS04250;product=glucose-6-phosphate isomerase;protein_id=WP_005768849.1;transl_table=11 NZ_CP103431.1 RefSeq gene 804734 805621 . + . ID=gene-NYQ15_RS04255;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=NYQ15_RS04255 NZ_CP103431.1 Protein Homology CDS 804734 805621 . + 0 ID=cds-WP_005768847.1;Parent=gene-NYQ15_RS04255;Dbxref=GenBank:WP_005768847.1;Name=WP_005768847.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819869.1;locus_tag=NYQ15_RS04255;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_005768847.1;transl_table=11 NZ_CP103431.1 RefSeq gene 805715 806734 . + . ID=gene-NYQ15_RS04260;Name=NYQ15_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04260 NZ_CP103431.1 Protein Homology CDS 805715 806734 . + 0 ID=cds-WP_230454411.1;Parent=gene-NYQ15_RS04260;Dbxref=GenBank:WP_230454411.1;Name=WP_230454411.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768845.1;locus_tag=NYQ15_RS04260;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=WP_230454411.1;transl_table=11 NZ_CP103431.1 RefSeq gene 806835 807104 . + . ID=gene-NYQ15_RS04265;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=NYQ15_RS04265 NZ_CP103431.1 Protein Homology CDS 806835 807104 . + 0 ID=cds-WP_005768842.1;Parent=gene-NYQ15_RS04265;Dbxref=GenBank:WP_005768842.1;Name=WP_005768842.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819871.1;locus_tag=NYQ15_RS04265;product=30S ribosomal protein S15;protein_id=WP_005768842.1;transl_table=11 NZ_CP103431.1 RefSeq gene 807115 809205 . + . ID=gene-NYQ15_RS04270;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=NYQ15_RS04270 NZ_CP103431.1 Protein Homology CDS 807115 809205 . + 0 ID=cds-WP_005768841.1;Parent=gene-NYQ15_RS04270;Dbxref=GenBank:WP_005768841.1;Name=WP_005768841.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819872.1;locus_tag=NYQ15_RS04270;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_005768841.1;transl_table=11 NZ_CP103431.1 RefSeq gene 809297 809773 . - . ID=gene-NYQ15_RS04275;Name=NYQ15_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04275 NZ_CP103431.1 Protein Homology CDS 809297 809773 . - 0 ID=cds-WP_012570706.1;Parent=gene-NYQ15_RS04275;Dbxref=GenBank:WP_012570706.1;Name=WP_012570706.1;Ontology_term=GO:0019242,GO:0008929;gbkey=CDS;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819873.2;locus_tag=NYQ15_RS04275;product=methylglyoxal synthase;protein_id=WP_012570706.1;transl_table=11 NZ_CP103431.1 RefSeq gene 809798 809908 . + . ID=gene-NYQ15_RS04280;Name=NYQ15_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04280 NZ_CP103431.1 Protein Homology CDS 809798 809908 . + 0 ID=cds-WP_010957850.1;Parent=gene-NYQ15_RS04280;Dbxref=GenBank:WP_010957850.1;Name=WP_010957850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819874.1;locus_tag=NYQ15_RS04280;product=hypothetical protein;protein_id=WP_010957850.1;transl_table=11 NZ_CP103431.1 RefSeq gene 809955 810353 . + . ID=gene-NYQ15_RS04285;Name=NYQ15_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04285 NZ_CP103431.1 GeneMarkS-2+ CDS 809955 810353 . + 0 ID=cds-WP_259423828.1;Parent=gene-NYQ15_RS04285;Dbxref=GenBank:WP_259423828.1;Name=WP_259423828.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS04285;product=DUF4131 domain-containing protein;protein_id=WP_259423828.1;transl_table=11 NZ_CP103431.1 RefSeq gene 810329 812263 . + . ID=gene-NYQ15_RS04290;Name=NYQ15_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04290 NZ_CP103431.1 Protein Homology CDS 810329 812263 . + 0 ID=cds-WP_143433531.1;Parent=gene-NYQ15_RS04290;Dbxref=GenBank:WP_143433531.1;Name=WP_143433531.1;Ontology_term=GO:0009290,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: protein motif:HMM:TIGR00361.1;locus_tag=NYQ15_RS04290;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_143433531.1;transl_table=11 NZ_CP103431.1 RefSeq gene 812245 814035 . + . ID=gene-NYQ15_RS04295;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=NYQ15_RS04295 NZ_CP103431.1 Protein Homology CDS 812245 814035 . + 0 ID=cds-WP_050497420.1;Parent=gene-NYQ15_RS04295;Dbxref=GenBank:WP_050497420.1;Name=WP_050497420.1;Ontology_term=GO:0006869,GO:0005319,GO:0005524,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=lipid transporter activity|0005319||IEA,ATP binding|0005524||IEA;go_process=lipid transport|0006869||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819875.2;locus_tag=NYQ15_RS04295;product=lipid A export permease/ATP-binding protein MsbA;protein_id=WP_050497420.1;transl_table=11 NZ_CP103431.1 RefSeq gene 814035 815012 . + . ID=gene-NYQ15_RS04300;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=NYQ15_RS04300 NZ_CP103431.1 Protein Homology CDS 814035 815012 . + 0 ID=cds-WP_005768833.1;Parent=gene-NYQ15_RS04300;Dbxref=GenBank:WP_005768833.1;Name=WP_005768833.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819876.1;locus_tag=NYQ15_RS04300;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_005768833.1;transl_table=11 NZ_CP103431.1 RefSeq gene 815009 816637 . - . ID=gene-NYQ15_RS04305;Name=NYQ15_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04305 NZ_CP103431.1 Protein Homology CDS 815009 816637 . - 0 ID=cds-WP_005772331.1;Parent=gene-NYQ15_RS04305;Dbxref=GenBank:WP_005772331.1;Name=WP_005772331.1;Ontology_term=GO:0009435,GO:0003952,GO:0005524;gbkey=CDS;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,ATP binding|0005524||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819877.1;locus_tag=NYQ15_RS04305;product=NAD+ synthase;protein_id=WP_005772331.1;transl_table=11 NZ_CP103431.1 RefSeq gene 816644 817015 . - . ID=gene-NYQ15_RS04310;Name=NYQ15_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04310 NZ_CP103431.1 Protein Homology CDS 816644 817015 . - 0 ID=cds-WP_005768829.1;Parent=gene-NYQ15_RS04310;Dbxref=GenBank:WP_005768829.1;Name=WP_005768829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819878.1;locus_tag=NYQ15_RS04310;product=Mth938-like domain-containing protein;protein_id=WP_005768829.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 817140 817600 . + . ID=gene-NYQ15_RS04315;Name=NYQ15_RS04315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS04315;pseudo=true NZ_CP103431.1 Protein Homology CDS 817140 817600 . + 0 ID=cds-NYQ15_RS04315;Parent=gene-NYQ15_RS04315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819879.2;locus_tag=NYQ15_RS04315;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 817922 819529 . + . ID=gene-NYQ15_RS04320;Name=NYQ15_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04320 NZ_CP103431.1 Protein Homology CDS 817922 819529 . + 0 ID=cds-WP_259411793.1;Parent=gene-NYQ15_RS04320;Dbxref=GenBank:WP_259411793.1;Name=WP_259411793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220439.1;locus_tag=NYQ15_RS04320;product=hypothetical protein;protein_id=WP_259411793.1;transl_table=11 NZ_CP103431.1 RefSeq gene 819542 819652 . + . ID=gene-NYQ15_RS04325;Name=NYQ15_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04325 NZ_CP103431.1 Protein Homology CDS 819542 819652 . + 0 ID=cds-WP_010957856.1;Parent=gene-NYQ15_RS04325;Dbxref=GenBank:WP_010957856.1;Name=WP_010957856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819882.1;locus_tag=NYQ15_RS04325;product=hypothetical protein;protein_id=WP_010957856.1;transl_table=11 NZ_CP103431.1 RefSeq gene 819639 820022 . + . ID=gene-NYQ15_RS04330;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=NYQ15_RS04330 NZ_CP103431.1 Protein Homology CDS 819639 820022 . + 0 ID=cds-WP_005772317.1;Parent=gene-NYQ15_RS04330;Dbxref=GenBank:WP_005772317.1;Name=WP_005772317.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819883.1;locus_tag=NYQ15_RS04330;product=30S ribosomal protein S6;protein_id=WP_005772317.1;transl_table=11 NZ_CP103431.1 RefSeq gene 820035 820256 . + . ID=gene-NYQ15_RS04335;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=NYQ15_RS04335 NZ_CP103431.1 Protein Homology CDS 820035 820256 . + 0 ID=cds-WP_005768821.1;Parent=gene-NYQ15_RS04335;Dbxref=GenBank:WP_005768821.1;Name=WP_005768821.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819884.1;locus_tag=NYQ15_RS04335;product=30S ribosomal protein S18;protein_id=WP_005768821.1;transl_table=11 NZ_CP103431.1 RefSeq gene 820260 821159 . + . ID=gene-NYQ15_RS04340;Name=NYQ15_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04340 NZ_CP103431.1 Protein Homology CDS 820260 821159 . + 0 ID=cds-WP_005768819.1;Parent=gene-NYQ15_RS04340;Dbxref=GenBank:WP_005768819.1;Name=WP_005768819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819885.1;locus_tag=NYQ15_RS04340;product=hypothetical protein;protein_id=WP_005768819.1;transl_table=11 NZ_CP103431.1 RefSeq gene 821177 821635 . + . ID=gene-NYQ15_RS04345;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=NYQ15_RS04345 NZ_CP103431.1 Protein Homology CDS 821177 821635 . + 0 ID=cds-WP_005768816.1;Parent=gene-NYQ15_RS04345;Dbxref=GenBank:WP_005768816.1;Name=WP_005768816.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819886.3;locus_tag=NYQ15_RS04345;product=50S ribosomal protein L9;protein_id=WP_005768816.1;transl_table=11 NZ_CP103431.1 RefSeq gene 821884 823716 . + . ID=gene-NYQ15_RS04350;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=NYQ15_RS04350 NZ_CP103431.1 Protein Homology CDS 821884 823716 . + 0 ID=cds-WP_259431073.1;Parent=gene-NYQ15_RS04350;Dbxref=GenBank:WP_259431073.1;Name=WP_259431073.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819887.1;locus_tag=NYQ15_RS04350;product=replicative DNA helicase;protein_id=WP_259431073.1;transl_table=11 NZ_CP103431.1 RefSeq gene 823713 824807 . + . ID=gene-NYQ15_RS04355;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=NYQ15_RS04355 NZ_CP103431.1 Protein Homology CDS 823713 824807 . + 0 ID=cds-WP_005772336.1;Parent=gene-NYQ15_RS04355;Dbxref=GenBank:WP_005772336.1;Name=WP_005772336.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819888.1;locus_tag=NYQ15_RS04355;product=alanine racemase;protein_id=WP_005772336.1;transl_table=11 NZ_CP103431.1 RefSeq gene 824804 825052 . + . ID=gene-NYQ15_RS04360;Name=NYQ15_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04360 NZ_CP103431.1 Protein Homology CDS 824804 825052 . + 0 ID=cds-WP_005768810.1;Parent=gene-NYQ15_RS04360;Dbxref=GenBank:WP_005768810.1;Name=WP_005768810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819889.1;locus_tag=NYQ15_RS04360;product=succinate dehydrogenase assembly factor 2;protein_id=WP_005768810.1;transl_table=11 NZ_CP103431.1 RefSeq gene 825044 825499 . - . ID=gene-NYQ15_RS04365;Name=NYQ15_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04365 NZ_CP103431.1 Protein Homology CDS 825044 825499 . - 0 ID=cds-WP_005768809.1;Parent=gene-NYQ15_RS04365;Dbxref=GenBank:WP_005768809.1;Name=WP_005768809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768809.1;locus_tag=NYQ15_RS04365;product=aminoacyl-tRNA deacylase;protein_id=WP_005768809.1;transl_table=11 NZ_CP103431.1 RefSeq gene 825580 826227 . - . ID=gene-NYQ15_RS04370;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=NYQ15_RS04370 NZ_CP103431.1 Protein Homology CDS 825580 826227 . - 0 ID=cds-WP_005768807.1;Parent=gene-NYQ15_RS04370;Dbxref=GenBank:WP_005768807.1;Name=WP_005768807.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819890.1;locus_tag=NYQ15_RS04370;product=uridine kinase;protein_id=WP_005768807.1;transl_table=11 NZ_CP103431.1 RefSeq gene 826217 826816 . - . ID=gene-NYQ15_RS04375;Name=NYQ15_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04375 NZ_CP103431.1 Protein Homology CDS 826217 826816 . - 0 ID=cds-WP_012570711.1;Parent=gene-NYQ15_RS04375;Dbxref=GenBank:WP_012570711.1;Name=WP_012570711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819891.1;locus_tag=NYQ15_RS04375;product=Smr/MutS family protein;protein_id=WP_012570711.1;transl_table=11 NZ_CP103431.1 RefSeq gene 826939 827997 . + . ID=gene-NYQ15_RS04380;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=NYQ15_RS04380 NZ_CP103431.1 Protein Homology CDS 826939 827997 . + 0 ID=cds-WP_005772323.1;Parent=gene-NYQ15_RS04380;Dbxref=GenBank:WP_005772323.1;Name=WP_005772323.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819892.1;locus_tag=NYQ15_RS04380;product=chorismate synthase;protein_id=WP_005772323.1;transl_table=11 NZ_CP103431.1 RefSeq gene 828010 829032 . + . ID=gene-NYQ15_RS04385;Name=NYQ15_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04385 NZ_CP103431.1 Protein Homology CDS 828010 829032 . + 0 ID=cds-WP_005768800.1;Parent=gene-NYQ15_RS04385;Dbxref=GenBank:WP_005768800.1;Name=WP_005768800.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819893.1;locus_tag=NYQ15_RS04385;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_005768800.1;transl_table=11 NZ_CP103431.1 RefSeq gene 829297 830403 . - . ID=gene-NYQ15_RS04390;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=NYQ15_RS04390 NZ_CP103431.1 Protein Homology CDS 829297 830403 . - 0 ID=cds-WP_005768795.1;Parent=gene-NYQ15_RS04390;Dbxref=GenBank:WP_005768795.1;Name=WP_005768795.1;Ontology_term=GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819894.1;locus_tag=NYQ15_RS04390;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_005768795.1;transl_table=11 NZ_CP103431.1 RefSeq gene 830834 831784 . + . ID=gene-NYQ15_RS04400;Name=NYQ15_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04400 NZ_CP103431.1 Protein Homology CDS 830834 831784 . + 0 ID=cds-WP_259431074.1;Parent=gene-NYQ15_RS04400;Dbxref=GenBank:WP_259431074.1;Name=WP_259431074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768790.1;locus_tag=NYQ15_RS04400;product=hypothetical protein;protein_id=WP_259431074.1;transl_table=11 NZ_CP103431.1 RefSeq gene 831879 833264 . + . ID=gene-NYQ15_RS04405;Name=NYQ15_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04405 NZ_CP103431.1 Protein Homology CDS 831879 833264 . + 0 ID=cds-WP_032074895.1;Parent=gene-NYQ15_RS04405;Dbxref=GenBank:WP_032074895.1;Name=WP_032074895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819898.2;locus_tag=NYQ15_RS04405;product=hypothetical protein;protein_id=WP_032074895.1;transl_table=11 NZ_CP103431.1 RefSeq gene 834506 835336 . - . ID=gene-NYQ15_RS04410;Name=NYQ15_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04410 NZ_CP103431.1 Protein Homology CDS 834506 835336 . - 0 ID=cds-WP_032074896.1;Parent=gene-NYQ15_RS04410;Dbxref=GenBank:WP_032074896.1;Name=WP_032074896.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012870.5;locus_tag=NYQ15_RS04410;product=integrase core domain-containing protein;protein_id=WP_032074896.1;transl_table=11 NZ_CP103431.1 RefSeq gene 835311 835505 . - . ID=gene-NYQ15_RS10580;Name=NYQ15_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10580 NZ_CP103431.1 Protein Homology CDS 835311 835505 . - 0 ID=cds-WP_017253036.1;Parent=gene-NYQ15_RS10580;Dbxref=GenBank:WP_017253036.1;Name=WP_017253036.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024908.5;locus_tag=NYQ15_RS10580;product=helix-turn-helix domain-containing protein;protein_id=WP_017253036.1;transl_table=11 NZ_CP103431.1 RefSeq gene 835605 835739 . - . ID=gene-NYQ15_RS04415;Name=NYQ15_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04415 NZ_CP103431.1 Protein Homology CDS 835605 835739 . - 0 ID=cds-WP_005768785.1;Parent=gene-NYQ15_RS04415;Dbxref=GenBank:WP_005768785.1;Name=WP_005768785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819900.1;locus_tag=NYQ15_RS04415;product=hypothetical protein;protein_id=WP_005768785.1;transl_table=11 NZ_CP103431.1 RefSeq gene 836008 837816 . + . ID=gene-NYQ15_RS04420;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=NYQ15_RS04420 NZ_CP103431.1 Protein Homology CDS 836008 837816 . + 0 ID=cds-WP_005772338.1;Parent=gene-NYQ15_RS04420;Dbxref=GenBank:WP_005772338.1;Name=WP_005772338.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819901.1;locus_tag=NYQ15_RS04420;product=translational GTPase TypA;protein_id=WP_005772338.1;transl_table=11 NZ_CP103431.1 RefSeq gene 837828 838994 . + . ID=gene-NYQ15_RS04425;Name=cetCB4;gbkey=Gene;gene=cetCB4;gene_biotype=protein_coding;locus_tag=NYQ15_RS04425 NZ_CP103431.1 Protein Homology CDS 837828 838994 . + 0 ID=cds-WP_259431075.1;Parent=gene-NYQ15_RS04425;Dbxref=GenBank:WP_259431075.1;Name=WP_259431075.1;gbkey=CDS;gene=cetCB4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819902.2;locus_tag=NYQ15_RS04425;product=Dot/Icm T4SS effector CetCB4;protein_id=WP_259431075.1;transl_table=11 NZ_CP103431.1 RefSeq gene 839026 840201 . + . ID=gene-NYQ15_RS04430;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=NYQ15_RS04430 NZ_CP103431.1 Protein Homology CDS 839026 840201 . + 0 ID=cds-WP_005768778.1;Parent=gene-NYQ15_RS04430;Dbxref=GenBank:WP_005768778.1;Name=WP_005768778.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819903.1;locus_tag=NYQ15_RS04430;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_005768778.1;transl_table=11 NZ_CP103431.1 RefSeq gene 840312 841403 . + . ID=gene-NYQ15_RS04435;Name=NYQ15_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04435 NZ_CP103431.1 Protein Homology CDS 840312 841403 . + 0 ID=cds-WP_259431076.1;Parent=gene-NYQ15_RS04435;Dbxref=GenBank:WP_259431076.1;Name=WP_259431076.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570716.1;locus_tag=NYQ15_RS04435;product=patatin-like phospholipase family protein;protein_id=WP_259431076.1;transl_table=11 NZ_CP103431.1 RefSeq gene 841373 841816 . - . ID=gene-NYQ15_RS04440;Name=NYQ15_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04440 NZ_CP103431.1 Protein Homology CDS 841373 841816 . - 0 ID=cds-WP_032074898.1;Parent=gene-NYQ15_RS04440;Dbxref=GenBank:WP_032074898.1;Name=WP_032074898.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819904.1;locus_tag=NYQ15_RS04440;product=disulfide bond formation protein B;protein_id=WP_032074898.1;transl_table=11 NZ_CP103431.1 RefSeq gene 841813 842412 . - . ID=gene-NYQ15_RS04445;Name=NYQ15_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04445 NZ_CP103431.1 Protein Homology CDS 841813 842412 . - 0 ID=cds-WP_010957869.1;Parent=gene-NYQ15_RS04445;Dbxref=GenBank:WP_010957869.1;Name=WP_010957869.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819905.2;locus_tag=NYQ15_RS04445;product=DsbA family protein;protein_id=WP_010957869.1;transl_table=11 NZ_CP103431.1 RefSeq gene 842451 843152 . - . ID=gene-NYQ15_RS04450;Name=NYQ15_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04450 NZ_CP103431.1 Protein Homology CDS 842451 843152 . - 0 ID=cds-WP_259431077.1;Parent=gene-NYQ15_RS04450;Dbxref=GenBank:WP_259431077.1;Name=WP_259431077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819906.1;locus_tag=NYQ15_RS04450;product=MBL fold metallo-hydrolase;protein_id=WP_259431077.1;transl_table=11 NZ_CP103431.1 RefSeq gene 843250 844188 . + . ID=gene-NYQ15_RS04455;Name=NYQ15_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04455 NZ_CP103431.1 Protein Homology CDS 843250 844188 . + 0 ID=cds-WP_005772332.1;Parent=gene-NYQ15_RS04455;Dbxref=GenBank:WP_005772332.1;Name=WP_005772332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819907.1;locus_tag=NYQ15_RS04455;product=FimV/HubP family polar landmark protein;protein_id=WP_005772332.1;transl_table=11 NZ_CP103431.1 RefSeq gene 844193 844978 . + . ID=gene-NYQ15_RS04460;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=NYQ15_RS04460 NZ_CP103431.1 Protein Homology CDS 844193 844978 . + 0 ID=cds-WP_005768766.1;Parent=gene-NYQ15_RS04460;Dbxref=GenBank:WP_005768766.1;Name=WP_005768766.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_338281.1;locus_tag=NYQ15_RS04460;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_005768766.1;transl_table=11 NZ_CP103431.1 RefSeq gene 845009 845884 . + . ID=gene-NYQ15_RS04465;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=NYQ15_RS04465 NZ_CP103431.1 Protein Homology CDS 845009 845884 . + 0 ID=cds-WP_005768761.1;Parent=gene-NYQ15_RS04465;Dbxref=GenBank:WP_005768761.1;Name=WP_005768761.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819908.1;locus_tag=NYQ15_RS04465;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_005768761.1;transl_table=11 NZ_CP103431.1 RefSeq gene 846017 847267 . + . ID=gene-NYQ15_RS04470;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=NYQ15_RS04470 NZ_CP103431.1 Protein Homology CDS 846017 847267 . + 0 ID=cds-WP_005768759.1;Parent=gene-NYQ15_RS04470;Dbxref=GenBank:WP_005768759.1;Name=WP_005768759.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819909.1;locus_tag=NYQ15_RS04470;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_005768759.1;transl_table=11 NZ_CP103431.1 RefSeq gene 847251 847868 . + . ID=gene-NYQ15_RS04475;Name=NYQ15_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04475 NZ_CP103431.1 Protein Homology CDS 847251 847868 . + 0 ID=cds-WP_012570094.1;Parent=gene-NYQ15_RS04475;Dbxref=GenBank:WP_012570094.1;Name=WP_012570094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819910.2;locus_tag=NYQ15_RS04475;product=SPOR domain-containing protein;protein_id=WP_012570094.1;transl_table=11 NZ_CP103431.1 RefSeq gene 847936 848490 . + . ID=gene-NYQ15_RS04480;Name=NYQ15_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04480 NZ_CP103431.1 Protein Homology CDS 847936 848490 . + 0 ID=cds-WP_005768755.1;Parent=gene-NYQ15_RS04480;Dbxref=GenBank:WP_005768755.1;Name=WP_005768755.1;Ontology_term=GO:0009403;gbkey=CDS;go_process=toxin biosynthetic process|0009403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819911.1;locus_tag=NYQ15_RS04480;product=CvpA family protein;protein_id=WP_005768755.1;transl_table=11 NZ_CP103431.1 RefSeq gene 848499 850019 . + . ID=gene-NYQ15_RS04485;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=NYQ15_RS04485 NZ_CP103431.1 Protein Homology CDS 848499 850019 . + 0 ID=cds-WP_005768753.1;Parent=gene-NYQ15_RS04485;Dbxref=GenBank:WP_005768753.1;Name=WP_005768753.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819912.1;locus_tag=NYQ15_RS04485;product=amidophosphoribosyltransferase;protein_id=WP_005768753.1;transl_table=11 NZ_CP103431.1 RefSeq gene 850016 850348 . + . ID=gene-NYQ15_RS04490;Name=NYQ15_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04490 NZ_CP103431.1 Protein Homology CDS 850016 850348 . + 0 ID=cds-WP_005768751.1;Parent=gene-NYQ15_RS04490;Dbxref=GenBank:WP_005768751.1;Name=WP_005768751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819913.1;locus_tag=NYQ15_RS04490;product=thyroglobulin type-1 repeat-containing protein;protein_id=WP_005768751.1;transl_table=11 NZ_CP103431.1 RefSeq gene 850365 850814 . + . ID=gene-NYQ15_RS04495;Name=NYQ15_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04495 NZ_CP103431.1 Protein Homology CDS 850365 850814 . + 0 ID=cds-WP_005768749.1;Parent=gene-NYQ15_RS04495;Dbxref=GenBank:WP_005768749.1;Name=WP_005768749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768749.1;locus_tag=NYQ15_RS04495;product=host attachment protein;protein_id=WP_005768749.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 850930 851093 . + . ID=gene-NYQ15_RS04500;Name=NYQ15_RS04500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS04500;pseudo=true NZ_CP103431.1 Protein Homology CDS 850930 851093 . + 0 ID=cds-NYQ15_RS04500;Parent=gene-NYQ15_RS04500;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819915.1;locus_tag=NYQ15_RS04500;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 851053 851409 . + . ID=gene-NYQ15_RS04505;Name=NYQ15_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04505 NZ_CP103431.1 Protein Homology CDS 851053 851409 . + 0 ID=cds-WP_193333246.1;Parent=gene-NYQ15_RS04505;Dbxref=GenBank:WP_193333246.1;Name=WP_193333246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253026.1;locus_tag=NYQ15_RS04505;product=hypothetical protein;protein_id=WP_193333246.1;transl_table=11 NZ_CP103431.1 RefSeq gene 851382 852170 . + . ID=gene-NYQ15_RS04510;Name=NYQ15_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04510 NZ_CP103431.1 GeneMarkS-2+ CDS 851382 852170 . + 0 ID=cds-WP_230454394.1;Parent=gene-NYQ15_RS04510;Dbxref=GenBank:WP_230454394.1;Name=WP_230454394.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS04510;product=hypothetical protein;protein_id=WP_230454394.1;transl_table=11 NZ_CP103431.1 RefSeq gene 852179 852871 . + . ID=gene-NYQ15_RS04515;Name=NYQ15_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04515 NZ_CP103431.1 GeneMarkS-2+ CDS 852179 852871 . + 0 ID=cds-WP_230454393.1;Parent=gene-NYQ15_RS04515;Dbxref=GenBank:WP_230454393.1;Name=WP_230454393.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS04515;product=hypothetical protein;protein_id=WP_230454393.1;transl_table=11 NZ_CP103431.1 RefSeq gene 852958 855066 . + . ID=gene-NYQ15_RS04520;Name=NYQ15_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04520 NZ_CP103431.1 GeneMarkS-2+ CDS 852958 855066 . + 0 ID=cds-WP_259431078.1;Parent=gene-NYQ15_RS04520;Dbxref=GenBank:WP_259431078.1;Name=WP_259431078.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS04520;product=hypothetical protein;protein_id=WP_259431078.1;transl_table=11 NZ_CP103431.1 RefSeq gene 855056 856117 . + . ID=gene-NYQ15_RS04525;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=NYQ15_RS04525 NZ_CP103431.1 Protein Homology CDS 855056 856117 . + 0 ID=cds-WP_259425709.1;Parent=gene-NYQ15_RS04525;Dbxref=GenBank:WP_259425709.1;Name=WP_259425709.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819919.1;locus_tag=NYQ15_RS04525;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_259425709.1;transl_table=11 NZ_CP103431.1 RefSeq gene 856129 856368 . - . ID=gene-NYQ15_RS04530;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=NYQ15_RS04530 NZ_CP103431.1 Protein Homology CDS 856129 856368 . - 0 ID=cds-WP_005768737.1;Parent=gene-NYQ15_RS04530;Dbxref=GenBank:WP_005768737.1;Name=WP_005768737.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819920.1;locus_tag=NYQ15_RS04530;product=50S ribosomal protein L31;protein_id=WP_005768737.1;transl_table=11 NZ_CP103431.1 RefSeq gene 856488 857786 . + . ID=gene-NYQ15_RS04535;Name=NYQ15_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04535 NZ_CP103431.1 Protein Homology CDS 856488 857786 . + 0 ID=cds-WP_259431079.1;Parent=gene-NYQ15_RS04535;Dbxref=GenBank:WP_259431079.1;Name=WP_259431079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819921.1;locus_tag=NYQ15_RS04535;product=MFS transporter;protein_id=WP_259431079.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 857804 858382 . - . ID=gene-NYQ15_RS04540;Name=NYQ15_RS04540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS04540;pseudo=true NZ_CP103431.1 Protein Homology CDS 857804 858382 . - 0 ID=cds-NYQ15_RS04540;Parent=gene-NYQ15_RS04540;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819922.1;locus_tag=NYQ15_RS04540;product=YciI family protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 858385 858930 . - . ID=gene-NYQ15_RS04545;Name=NYQ15_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04545 NZ_CP103431.1 Protein Homology CDS 858385 858930 . - 0 ID=cds-WP_005768731.1;Parent=gene-NYQ15_RS04545;Dbxref=GenBank:WP_005768731.1;Name=WP_005768731.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819923.1;locus_tag=NYQ15_RS04545;product=septation protein A;protein_id=WP_005768731.1;transl_table=11 NZ_CP103431.1 RefSeq gene 858983 859597 . + . ID=gene-NYQ15_RS04550;Name=NYQ15_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04550 NZ_CP103431.1 Protein Homology CDS 858983 859597 . + 0 ID=cds-WP_005768730.1;Parent=gene-NYQ15_RS04550;Dbxref=GenBank:WP_005768730.1;Name=WP_005768730.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819924.1;locus_tag=NYQ15_RS04550;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_005768730.1;transl_table=11 NZ_CP103431.1 RefSeq gene 859695 860669 . + . ID=gene-NYQ15_RS04555;Name=NYQ15_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04555 NZ_CP103431.1 Protein Homology CDS 859695 860669 . + 0 ID=cds-WP_005768729.1;Parent=gene-NYQ15_RS04555;Dbxref=GenBank:WP_005768729.1;Name=WP_005768729.1;Ontology_term=GO:0016310,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819925.1;locus_tag=NYQ15_RS04555;product=aminoglycoside phosphotransferase family protein;protein_id=WP_005768729.1;transl_table=11 NZ_CP103431.1 RefSeq gene 860671 860814 . - . ID=gene-NYQ15_RS04560;Name=NYQ15_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04560 NZ_CP103431.1 Protein Homology CDS 860671 860814 . - 0 ID=cds-WP_010957883.1;Parent=gene-NYQ15_RS04560;Dbxref=GenBank:WP_010957883.1;Name=WP_010957883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819926.2;locus_tag=NYQ15_RS04560;product=hypothetical protein;protein_id=WP_010957883.1;transl_table=11 NZ_CP103431.1 RefSeq gene 861108 862532 . - . ID=gene-NYQ15_RS04565;Name=NYQ15_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04565 NZ_CP103431.1 Protein Homology CDS 861108 862532 . - 0 ID=cds-WP_005768262.1;Parent=gene-NYQ15_RS04565;Dbxref=GenBank:WP_005768262.1;Name=WP_005768262.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819927.1;locus_tag=NYQ15_RS04565;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WP_005768262.1;transl_table=11 NZ_CP103431.1 RefSeq gene 862534 863007 . - . ID=gene-NYQ15_RS04570;Name=NYQ15_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04570 NZ_CP103431.1 Protein Homology CDS 862534 863007 . - 0 ID=cds-WP_010957885.1;Parent=gene-NYQ15_RS04570;Dbxref=GenBank:WP_010957885.1;Name=WP_010957885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819928.1;locus_tag=NYQ15_RS04570;product=hotdog fold thioesterase;protein_id=WP_010957885.1;transl_table=11 NZ_CP103431.1 RefSeq gene 863246 864361 . - . ID=gene-NYQ15_RS04575;Name=NYQ15_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04575 NZ_CP103431.1 Protein Homology CDS 863246 864361 . - 0 ID=cds-WP_005772484.1;Parent=gene-NYQ15_RS04575;Dbxref=GenBank:WP_005772484.1;Name=WP_005772484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819929.1;locus_tag=NYQ15_RS04575;product=hypothetical protein;protein_id=WP_005772484.1;transl_table=11 NZ_CP103431.1 RefSeq gene 864363 864872 . - . ID=gene-NYQ15_RS04580;Name=NYQ15_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04580 NZ_CP103431.1 Protein Homology CDS 864363 864872 . - 0 ID=cds-WP_011996940.1;Parent=gene-NYQ15_RS04580;Dbxref=GenBank:WP_011996940.1;Name=WP_011996940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819930.1;locus_tag=NYQ15_RS04580;product=enhanced entry protein;protein_id=WP_011996940.1;transl_table=11 NZ_CP103431.1 RefSeq gene 865066 865833 . + . ID=gene-NYQ15_RS04585;Name=NYQ15_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04585 NZ_CP103431.1 Protein Homology CDS 865066 865833 . + 0 ID=cds-WP_032138392.1;Parent=gene-NYQ15_RS04585;Dbxref=GenBank:WP_032138392.1;Name=WP_032138392.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819931.1;locus_tag=NYQ15_RS04585;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_032138392.1;transl_table=11 NZ_CP103431.1 RefSeq gene 865852 867061 . + . ID=gene-NYQ15_RS04590;Name=NYQ15_RS04590;end_range=867061,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04590;partial=true NZ_CP103431.1 Protein Homology CDS 865852 867061 . + 0 ID=cds-WP_259431080.1;Parent=gene-NYQ15_RS04590;Dbxref=GenBank:WP_259431080.1;Name=WP_259431080.1;Ontology_term=GO:0030551;end_range=867061,.;gbkey=CDS;go_function=cyclic nucleotide binding|0030551||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772490.1;locus_tag=NYQ15_RS04590;partial=true;product=cyclic nucleotide-binding and patatin-like phospholipase domain-containing protein;protein_id=WP_259431080.1;transl_table=11 NZ_CP103431.1 RefSeq gene 867367 869136 . + . ID=gene-NYQ15_RS04595;Name=NYQ15_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04595 NZ_CP103431.1 Protein Homology CDS 867367 869136 . + 0 ID=cds-WP_259431106.1;Parent=gene-NYQ15_RS04595;Dbxref=GenBank:WP_259431106.1;Name=WP_259431106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819932.1;locus_tag=NYQ15_RS04595;product=hypothetical protein;protein_id=WP_259431106.1;transl_table=11 NZ_CP103431.1 RefSeq gene 870223 870504 . - . ID=gene-NYQ15_RS04600;Name=NYQ15_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04600 NZ_CP103431.1 Protein Homology CDS 870223 870504 . - 0 ID=cds-WP_259431107.1;Parent=gene-NYQ15_RS04600;Dbxref=GenBank:WP_259431107.1;Name=WP_259431107.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: protein motif:HMM:NF014731.5;locus_tag=NYQ15_RS04600;product=KUP/HAK/KT family potassium transporter;protein_id=WP_259431107.1;transl_table=11 NZ_CP103431.1 RefSeq gene 870741 871856 . + . ID=gene-NYQ15_RS04605;Name=NYQ15_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04605 NZ_CP103431.1 Protein Homology CDS 870741 871856 . + 0 ID=cds-WP_005772487.1;Parent=gene-NYQ15_RS04605;Dbxref=GenBank:WP_005772487.1;Name=WP_005772487.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819933.1;locus_tag=NYQ15_RS04605;product=fatty acid desaturase;protein_id=WP_005772487.1;transl_table=11 NZ_CP103431.1 RefSeq gene 871887 872201 . + . ID=gene-NYQ15_RS04610;Name=NYQ15_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04610 NZ_CP103431.1 Protein Homology CDS 871887 872201 . + 0 ID=cds-WP_010957891.1;Parent=gene-NYQ15_RS04610;Dbxref=GenBank:WP_010957891.1;Name=WP_010957891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819934.1;locus_tag=NYQ15_RS04610;product=hypothetical protein;protein_id=WP_010957891.1;transl_table=11 NZ_CP103431.1 RefSeq gene 872149 873462 . - . ID=gene-NYQ15_RS04615;Name=NYQ15_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04615 NZ_CP103431.1 Protein Homology CDS 872149 873462 . - 0 ID=cds-WP_005768249.1;Parent=gene-NYQ15_RS04615;Dbxref=GenBank:WP_005768249.1;Name=WP_005768249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819935.1;locus_tag=NYQ15_RS04615;product=MFS transporter;protein_id=WP_005768249.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 873583 874715 . + . ID=gene-NYQ15_RS04620;Name=NYQ15_RS04620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS04620;pseudo=true NZ_CP103431.1 Protein Homology CDS 873583 874715 . + 0 ID=cds-NYQ15_RS04620;Parent=gene-NYQ15_RS04620;Note=frameshifted;Ontology_term=GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819936.1;locus_tag=NYQ15_RS04620;product=AI-2E family transporter;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 874710 875378 . - . ID=gene-NYQ15_RS04625;Name=NYQ15_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04625 NZ_CP103431.1 Protein Homology CDS 874710 875378 . - 0 ID=cds-WP_098953067.1;Parent=gene-NYQ15_RS04625;Dbxref=GenBank:WP_098953067.1;Name=WP_098953067.1;Ontology_term=GO:0032259,GO:0008757,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819937.1;locus_tag=NYQ15_RS04625;product=O-methyltransferase;protein_id=WP_098953067.1;transl_table=11 NZ_CP103431.1 RefSeq gene 875380 876381 . - . ID=gene-NYQ15_RS04630;Name=NYQ15_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04630 NZ_CP103431.1 Protein Homology CDS 875380 876381 . - 0 ID=cds-WP_005768243.1;Parent=gene-NYQ15_RS04630;Dbxref=GenBank:WP_005768243.1;Name=WP_005768243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819938.1;locus_tag=NYQ15_RS04630;product=lytic murein transglycosylase;protein_id=WP_005768243.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 876482 877375 . - . ID=gene-NYQ15_RS04635;Name=mmsB;gbkey=Gene;gene=mmsB;gene_biotype=pseudogene;locus_tag=NYQ15_RS04635;pseudo=true NZ_CP103431.1 Protein Homology CDS 876482 877375 . - 0 ID=cds-NYQ15_RS04635;Parent=gene-NYQ15_RS04635;Note=internal stop;Ontology_term=GO:0006574,GO:0008442,GO:0051287;gbkey=CDS;gene=mmsB;go_function=3-hydroxyisobutyrate dehydrogenase activity|0008442||IEA,NAD binding|0051287||IEA;go_process=valine catabolic process|0006574||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819939.1;locus_tag=NYQ15_RS04635;product=3-hydroxyisobutyrate dehydrogenase;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 877385 878881 . - . ID=gene-NYQ15_RS04640;Name=NYQ15_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04640 NZ_CP103431.1 Protein Homology CDS 877385 878881 . - 0 ID=cds-WP_005772502.1;Parent=gene-NYQ15_RS04640;Dbxref=GenBank:WP_005772502.1;Name=WP_005772502.1;Ontology_term=GO:0018478;gbkey=CDS;go_function=malonate-semialdehyde dehydrogenase (acetylating) activity|0018478||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819940.1;locus_tag=NYQ15_RS04640;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_005772502.1;transl_table=11 NZ_CP103431.1 RefSeq gene 878913 879503 . - . ID=gene-NYQ15_RS04645;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=NYQ15_RS04645 NZ_CP103431.1 Protein Homology CDS 878913 879503 . - 0 ID=cds-WP_005768240.1;Parent=gene-NYQ15_RS04645;Dbxref=GenBank:WP_005768240.1;Name=WP_005768240.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819941.1;locus_tag=NYQ15_RS04645;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_005768240.1;transl_table=11 NZ_CP103431.1 RefSeq gene 879525 880370 . - . ID=gene-NYQ15_RS04650;Name=NYQ15_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04650 NZ_CP103431.1 Protein Homology CDS 879525 880370 . - 0 ID=cds-WP_012570071.1;Parent=gene-NYQ15_RS04650;Dbxref=GenBank:WP_012570071.1;Name=WP_012570071.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819942.1;locus_tag=NYQ15_RS04650;product=SDR family oxidoreductase;protein_id=WP_012570071.1;transl_table=11 NZ_CP103431.1 RefSeq gene 880360 881040 . - . ID=gene-NYQ15_RS04655;Name=NYQ15_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04655 NZ_CP103431.1 Protein Homology CDS 880360 881040 . - 0 ID=cds-WP_010957898.1;Parent=gene-NYQ15_RS04655;Dbxref=GenBank:WP_010957898.1;Name=WP_010957898.1;Ontology_term=GO:0006284,GO:0003677,GO:0003905;gbkey=CDS;go_function=DNA binding|0003677||IEA,alkylbase DNA N-glycosylase activity|0003905||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819943.1;locus_tag=NYQ15_RS04655;product=DNA-3-methyladenine glycosylase;protein_id=WP_010957898.1;transl_table=11 NZ_CP103431.1 RefSeq gene 881024 882526 . - . ID=gene-NYQ15_RS04660;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=NYQ15_RS04660 NZ_CP103431.1 Protein Homology CDS 881024 882526 . - 0 ID=cds-WP_032074942.1;Parent=gene-NYQ15_RS04660;Dbxref=GenBank:WP_032074942.1;Name=WP_032074942.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819944.2;locus_tag=NYQ15_RS04660;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_032074942.1;transl_table=11 NZ_CP103431.1 RefSeq gene 882593 884137 . + . ID=gene-NYQ15_RS04665;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=NYQ15_RS04665 NZ_CP103431.1 Protein Homology CDS 882593 884137 . + 0 ID=cds-WP_012570733.1;Parent=gene-NYQ15_RS04665;Dbxref=GenBank:WP_012570733.1;Name=WP_012570733.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819945.2;locus_tag=NYQ15_RS04665;product=glycerol kinase GlpK;protein_id=WP_012570733.1;transl_table=11 NZ_CP103431.1 RefSeq gene 884106 884879 . - . ID=gene-NYQ15_RS04670;Name=NYQ15_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04670 NZ_CP103431.1 Protein Homology CDS 884106 884879 . - 0 ID=cds-WP_005768229.1;Parent=gene-NYQ15_RS04670;Dbxref=GenBank:WP_005768229.1;Name=WP_005768229.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819946.1;locus_tag=NYQ15_RS04670;product=ABC transporter permease;protein_id=WP_005768229.1;transl_table=11 NZ_CP103431.1 RefSeq gene 884880 885794 . - . ID=gene-NYQ15_RS04675;Name=NYQ15_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04675 NZ_CP103431.1 Protein Homology CDS 884880 885794 . - 0 ID=cds-WP_005768225.1;Parent=gene-NYQ15_RS04675;Dbxref=GenBank:WP_005768225.1;Name=WP_005768225.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819947.1;locus_tag=NYQ15_RS04675;product=ABC transporter ATP-binding protein;protein_id=WP_005768225.1;transl_table=11 NZ_CP103431.1 RefSeq gene 885800 886189 . - . ID=gene-NYQ15_RS04680;Name=NYQ15_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04680 NZ_CP103431.1 Protein Homology CDS 885800 886189 . - 0 ID=cds-WP_005768219.1;Parent=gene-NYQ15_RS04680;Dbxref=GenBank:WP_005768219.1;Name=WP_005768219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819948.1;locus_tag=NYQ15_RS04680;product=RNA-binding protein;protein_id=WP_005768219.1;transl_table=11 NZ_CP103431.1 RefSeq gene 886382 886954 . - . ID=gene-NYQ15_RS04685;Name=NYQ15_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04685 NZ_CP103431.1 Protein Homology CDS 886382 886954 . - 0 ID=cds-WP_012570732.1;Parent=gene-NYQ15_RS04685;Dbxref=GenBank:WP_012570732.1;Name=WP_012570732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570732.1;locus_tag=NYQ15_RS04685;product=outer membrane beta-barrel protein;protein_id=WP_012570732.1;transl_table=11 NZ_CP103431.1 RefSeq gene 887266 888717 . + . ID=gene-NYQ15_RS04690;Name=coxDFB1;gbkey=Gene;gene=coxDFB1;gene_biotype=protein_coding;locus_tag=NYQ15_RS04690 NZ_CP103431.1 Protein Homology CDS 887266 888717 . + 0 ID=cds-WP_098953068.1;Parent=gene-NYQ15_RS04690;Dbxref=GenBank:WP_098953068.1;Name=WP_098953068.1;gbkey=CDS;gene=coxDFB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819950.2;locus_tag=NYQ15_RS04690;product=Dot/Icm type IV secretion system effector CoxDFB1;protein_id=WP_098953068.1;transl_table=11 NZ_CP103431.1 RefSeq gene 888755 889342 . - . ID=gene-NYQ15_RS04695;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=NYQ15_RS04695 NZ_CP103431.1 Protein Homology CDS 888755 889342 . - 0 ID=cds-WP_310795123.1;Parent=gene-NYQ15_RS04695;Dbxref=GenBank:WP_310795123.1;Name=WP_310795123.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: protein motif:HMM:TIGR00091.1;locus_tag=NYQ15_RS04695;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_310795123.1;transl_table=11 NZ_CP103431.1 RefSeq gene 889521 889591 . + . ID=gene-NYQ15_RS04700;Name=NYQ15_RS04700;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS04700 NZ_CP103431.1 tRNAscan-SE tRNA 889521 889591 . + . ID=rna-NYQ15_RS04700;Parent=gene-NYQ15_RS04700;anticodon=(pos:889553..889555);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS04700;product=tRNA-Gly NZ_CP103431.1 tRNAscan-SE exon 889521 889591 . + . ID=exon-NYQ15_RS04700-1;Parent=rna-NYQ15_RS04700;anticodon=(pos:889553..889555);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS04700;product=tRNA-Gly NZ_CP103431.1 RefSeq gene 889598 891124 . + . ID=gene-NYQ15_RS04705;Name=NYQ15_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04705 NZ_CP103431.1 Protein Homology CDS 889598 891124 . + 0 ID=cds-WP_259431081.1;Parent=gene-NYQ15_RS04705;Dbxref=GenBank:WP_259431081.1;Name=WP_259431081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819951.2;locus_tag=NYQ15_RS04705;product=AsmA family protein;protein_id=WP_259431081.1;transl_table=11 NZ_CP103431.1 RefSeq gene 891130 892194 . + . ID=gene-NYQ15_RS04710;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=NYQ15_RS04710 NZ_CP103431.1 Protein Homology CDS 891130 892194 . + 0 ID=cds-WP_005768498.1;Parent=gene-NYQ15_RS04710;Dbxref=GenBank:WP_005768498.1;Name=WP_005768498.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819952.1;locus_tag=NYQ15_RS04710;product=A/G-specific adenine glycosylase;protein_id=WP_005768498.1;transl_table=11 NZ_CP103431.1 RefSeq gene 892191 892463 . + . ID=gene-NYQ15_RS04715;Name=NYQ15_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04715 NZ_CP103431.1 Protein Homology CDS 892191 892463 . + 0 ID=cds-WP_005768500.1;Parent=gene-NYQ15_RS04715;Dbxref=GenBank:WP_005768500.1;Name=WP_005768500.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819953.1;locus_tag=NYQ15_RS04715;product=oxidative damage protection protein;protein_id=WP_005768500.1;transl_table=11 NZ_CP103431.1 RefSeq gene 892465 892848 . - . ID=gene-NYQ15_RS04720;Name=NYQ15_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04720 NZ_CP103431.1 Protein Homology CDS 892465 892848 . - 0 ID=cds-WP_005768502.1;Parent=gene-NYQ15_RS04720;Dbxref=GenBank:WP_005768502.1;Name=WP_005768502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819954.1;locus_tag=NYQ15_RS04720;product=hypothetical protein;protein_id=WP_005768502.1;transl_table=11 NZ_CP103431.1 RefSeq gene 892924 893364 . + . ID=gene-NYQ15_RS04725;Name=NYQ15_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04725 NZ_CP103431.1 Protein Homology CDS 892924 893364 . + 0 ID=cds-WP_010957906.1;Parent=gene-NYQ15_RS04725;Dbxref=GenBank:WP_010957906.1;Name=WP_010957906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819955.2;locus_tag=NYQ15_RS04725;product=rhodanese-like domain-containing protein;protein_id=WP_010957906.1;transl_table=11 NZ_CP103431.1 RefSeq gene 893409 893484 . + . ID=gene-NYQ15_RS04730;Name=NYQ15_RS04730;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS04730 NZ_CP103431.1 tRNAscan-SE tRNA 893409 893484 . + . ID=rna-NYQ15_RS04730;Parent=gene-NYQ15_RS04730;anticodon=(pos:893442..893444);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS04730;product=tRNA-Phe NZ_CP103431.1 tRNAscan-SE exon 893409 893484 . + . ID=exon-NYQ15_RS04730-1;Parent=rna-NYQ15_RS04730;anticodon=(pos:893442..893444);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS04730;product=tRNA-Phe NZ_CP103431.1 RefSeq gene 893853 893954 . - . ID=gene-NYQ15_RS04735;Name=NYQ15_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04735 NZ_CP103431.1 Protein Homology CDS 893853 893954 . - 0 ID=cds-WP_010957907.1;Parent=gene-NYQ15_RS04735;Dbxref=GenBank:WP_010957907.1;Name=WP_010957907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819956.1;locus_tag=NYQ15_RS04735;product=hypothetical protein;protein_id=WP_010957907.1;transl_table=11 NZ_CP103431.1 RefSeq gene 894195 895166 . - . ID=gene-NYQ15_RS04740;Name=NYQ15_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04740 NZ_CP103431.1 Protein Homology CDS 894195 895166 . - 0 ID=cds-WP_259431082.1;Parent=gene-NYQ15_RS04740;Dbxref=GenBank:WP_259431082.1;Name=WP_259431082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819957.1;locus_tag=NYQ15_RS04740;product=hypothetical protein;protein_id=WP_259431082.1;transl_table=11 NZ_CP103431.1 RefSeq gene 895291 896277 . - . ID=gene-NYQ15_RS04745;Name=rhuM;gbkey=Gene;gene=rhuM;gene_biotype=protein_coding;locus_tag=NYQ15_RS04745 NZ_CP103431.1 Protein Homology CDS 895291 896277 . - 0 ID=cds-WP_010957909.1;Parent=gene-NYQ15_RS04745;Dbxref=GenBank:WP_010957909.1;Name=WP_010957909.1;gbkey=CDS;gene=rhuM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819958.1;locus_tag=NYQ15_RS04745;product=RhuM family protein;protein_id=WP_010957909.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 896666 897608 . - . ID=gene-NYQ15_RS04750;Name=NYQ15_RS04750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS04750;pseudo=true NZ_CP103431.1 Protein Homology CDS 896666 897608 . - 0 ID=cds-NYQ15_RS04750;Parent=gene-NYQ15_RS04750;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011213396.1;locus_tag=NYQ15_RS04750;product=transposase;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 897819 898274 . + . ID=gene-NYQ15_RS04755;Name=NYQ15_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04755 NZ_CP103431.1 Protein Homology CDS 897819 898274 . + 0 ID=cds-WP_005772820.1;Parent=gene-NYQ15_RS04755;Dbxref=GenBank:WP_005772820.1;Name=WP_005772820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819959.1;locus_tag=NYQ15_RS04755;product=hypothetical protein;protein_id=WP_005772820.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 904479 905327 . - . ID=gene-NYQ15_RS04760;Name=NYQ15_RS04760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS04760;partial=true;pseudo=true;start_range=.,904479 NZ_CP103431.1 Protein Homology CDS 904479 905327 . - 0 ID=cds-NYQ15_RS04760;Parent=gene-NYQ15_RS04760;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819962.2;locus_tag=NYQ15_RS04760;partial=true;product=APC family permease;pseudo=true;start_range=.,904479;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 905352 906111 . - . ID=gene-NYQ15_RS04765;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=pseudogene;locus_tag=NYQ15_RS04765;pseudo=true NZ_CP103431.1 Protein Homology CDS 905352 906111 . - 0 ID=cds-NYQ15_RS04765;Parent=gene-NYQ15_RS04765;Note=frameshifted%3B internal stop;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819963.1;locus_tag=NYQ15_RS04765;product=NAD(+) diphosphatase;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 906130 906783 . - . ID=gene-NYQ15_RS04770;Name=NYQ15_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04770 NZ_CP103431.1 Protein Homology CDS 906130 906783 . - 0 ID=cds-WP_005772817.1;Parent=gene-NYQ15_RS04770;Dbxref=GenBank:WP_005772817.1;Name=WP_005772817.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819964.1;locus_tag=NYQ15_RS04770;product=response regulator;protein_id=WP_005772817.1;transl_table=11 NZ_CP103431.1 RefSeq gene 906920 907582 . - . ID=gene-NYQ15_RS04775;Name=NYQ15_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04775 NZ_CP103431.1 Protein Homology CDS 906920 907582 . - 0 ID=cds-WP_259411803.1;Parent=gene-NYQ15_RS04775;Dbxref=GenBank:WP_259411803.1;Name=WP_259411803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819965.1;locus_tag=NYQ15_RS04775;product=hypothetical protein;protein_id=WP_259411803.1;transl_table=11 NZ_CP103431.1 RefSeq gene 907778 909022 . + . ID=gene-NYQ15_RS04780;Name=NYQ15_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04780 NZ_CP103431.1 Protein Homology CDS 907778 909022 . + 0 ID=cds-WP_098953069.1;Parent=gene-NYQ15_RS04780;Dbxref=GenBank:WP_098953069.1;Name=WP_098953069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819966.1;locus_tag=NYQ15_RS04780;product=murein L%2CD-transpeptidase catalytic domain family protein;protein_id=WP_098953069.1;transl_table=11 NZ_CP103431.1 RefSeq gene 909011 909301 . - . ID=gene-NYQ15_RS10585;Name=NYQ15_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10585 NZ_CP103431.1 Protein Homology CDS 909011 909301 . - 0 ID=cds-WP_273700661.1;Parent=gene-NYQ15_RS10585;Dbxref=GenBank:WP_273700661.1;Name=WP_273700661.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015589.5;locus_tag=NYQ15_RS10585;product=glycosyl hydrolase family 65 protein;protein_id=WP_273700661.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 909350 911421 . - . ID=gene-NYQ15_RS10590;Name=NYQ15_RS10590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS10590;partial=true;pseudo=true;start_range=.,909350 NZ_CP103431.1 Protein Homology CDS 909350 911421 . - 0 ID=cds-NYQ15_RS10590;Parent=gene-NYQ15_RS10590;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005975,GO:0016798,GO:0030246;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF015588.5%2CHMM:NF015592.5;locus_tag=NYQ15_RS10590;partial=true;product=glycoside hydrolase family 65 protein;pseudo=true;start_range=.,909350;transl_table=11 NZ_CP103431.1 RefSeq gene 911436 912947 . - . ID=gene-NYQ15_RS04800;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=NYQ15_RS04800 NZ_CP103431.1 Protein Homology CDS 911436 912947 . - 0 ID=cds-WP_032074937.1;Parent=gene-NYQ15_RS04800;Dbxref=GenBank:WP_032074937.1;Name=WP_032074937.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: protein motif:HMM:TIGR00685.1;locus_tag=NYQ15_RS04800;product=trehalose-phosphatase;protein_id=WP_032074937.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 912982 914210 . - . ID=gene-NYQ15_RS04805;Name=NYQ15_RS04805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS04805;pseudo=true NZ_CP103431.1 Protein Homology CDS 912982 914210 . - 0 ID=cds-NYQ15_RS04805;Parent=gene-NYQ15_RS04805;Note=frameshifted;Ontology_term=GO:0042908,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819967.1;locus_tag=NYQ15_RS04805;product=Bcr/CflA family efflux MFS transporter;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 914355 914906 . + . ID=gene-NYQ15_RS04810;Name=NYQ15_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04810 NZ_CP103431.1 Protein Homology CDS 914355 914906 . + 0 ID=cds-WP_005768522.1;Parent=gene-NYQ15_RS04810;Dbxref=GenBank:WP_005768522.1;Name=WP_005768522.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819968.1;locus_tag=NYQ15_RS04810;product=helix-turn-helix domain-containing protein;protein_id=WP_005768522.1;transl_table=11 NZ_CP103431.1 RefSeq gene 914919 915089 . + . ID=gene-NYQ15_RS04815;Name=NYQ15_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04815 NZ_CP103431.1 Protein Homology CDS 914919 915089 . + 0 ID=cds-WP_005772818.1;Parent=gene-NYQ15_RS04815;Dbxref=GenBank:WP_005772818.1;Name=WP_005772818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768524.1;locus_tag=NYQ15_RS04815;product=DUF3330 domain-containing protein;protein_id=WP_005772818.1;transl_table=11 NZ_CP103431.1 RefSeq gene 915100 915798 . - . ID=gene-NYQ15_RS04820;Name=NYQ15_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04820 NZ_CP103431.1 Protein Homology CDS 915100 915798 . - 0 ID=cds-WP_005772814.1;Parent=gene-NYQ15_RS04820;Dbxref=GenBank:WP_005772814.1;Name=WP_005772814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819970.1;locus_tag=NYQ15_RS04820;product=SDR family oxidoreductase;protein_id=WP_005772814.1;transl_table=11 NZ_CP103431.1 RefSeq gene 915798 916253 . - . ID=gene-NYQ15_RS04825;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=NYQ15_RS04825 NZ_CP103431.1 Protein Homology CDS 915798 916253 . - 0 ID=cds-WP_005768526.1;Parent=gene-NYQ15_RS04825;Dbxref=GenBank:WP_005768526.1;Name=WP_005768526.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768526.1;locus_tag=NYQ15_RS04825;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_005768526.1;transl_table=11 NZ_CP103431.1 RefSeq gene 916326 917237 . + . ID=gene-NYQ15_RS04830;Name=NYQ15_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04830 NZ_CP103431.1 Protein Homology CDS 916326 917237 . + 0 ID=cds-WP_080592784.1;Parent=gene-NYQ15_RS04830;Dbxref=GenBank:WP_080592784.1;Name=WP_080592784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819972.2;locus_tag=NYQ15_RS04830;product=Kdo hydroxylase family protein;protein_id=WP_080592784.1;transl_table=11 NZ_CP103431.1 RefSeq gene 917522 917710 . + . ID=gene-NYQ15_RS04840;Name=cydP;gbkey=Gene;gene=cydP;gene_biotype=protein_coding;locus_tag=NYQ15_RS04840 NZ_CP103431.1 Protein Homology CDS 917522 917710 . + 0 ID=cds-WP_005768533.1;Parent=gene-NYQ15_RS04840;Dbxref=GenBank:WP_005768533.1;Name=WP_005768533.1;gbkey=CDS;gene=cydP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332977.1;locus_tag=NYQ15_RS04840;product=cytochrome oxidase putative small subunit CydP;protein_id=WP_005768533.1;transl_table=11 NZ_CP103431.1 RefSeq gene 917707 919272 . + . ID=gene-NYQ15_RS04845;Name=NYQ15_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04845 NZ_CP103431.1 Protein Homology CDS 917707 919272 . + 0 ID=cds-WP_005772348.1;Parent=gene-NYQ15_RS04845;Dbxref=GenBank:WP_005772348.1;Name=WP_005772348.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819973.1;locus_tag=NYQ15_RS04845;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_005772348.1;transl_table=11 NZ_CP103431.1 RefSeq gene 919269 920402 . + . ID=gene-NYQ15_RS04850;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=NYQ15_RS04850 NZ_CP103431.1 Protein Homology CDS 919269 920402 . + 0 ID=cds-WP_005768539.1;Parent=gene-NYQ15_RS04850;Dbxref=GenBank:WP_005768539.1;Name=WP_005768539.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819974.1;locus_tag=NYQ15_RS04850;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_005768539.1;transl_table=11 NZ_CP103431.1 RefSeq gene 920413 920517 . + . ID=gene-NYQ15_RS04855;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=NYQ15_RS04855 NZ_CP103431.1 Protein Homology CDS 920413 920517 . + 0 ID=cds-WP_010957924.1;Parent=gene-NYQ15_RS04855;Dbxref=GenBank:WP_010957924.1;Name=WP_010957924.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819975.2;locus_tag=NYQ15_RS04855;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_010957924.1;transl_table=11 NZ_CP103431.1 RefSeq gene 920646 921176 . - . ID=gene-NYQ15_RS04860;Name=NYQ15_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04860 NZ_CP103431.1 Protein Homology CDS 920646 921176 . - 0 ID=cds-WP_005768543.1;Parent=gene-NYQ15_RS04860;Dbxref=GenBank:WP_005768543.1;Name=WP_005768543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819976.1;locus_tag=NYQ15_RS04860;product=phospholipase D family protein;protein_id=WP_005768543.1;transl_table=11 NZ_CP103431.1 RefSeq gene 921294 922349 . + . ID=gene-NYQ15_RS04865;Name=NYQ15_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04865 NZ_CP103431.1 Protein Homology CDS 921294 922349 . + 0 ID=cds-WP_005768547.1;Parent=gene-NYQ15_RS04865;Dbxref=GenBank:WP_005768547.1;Name=WP_005768547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819978.1;locus_tag=NYQ15_RS04865;product=hypothetical protein;protein_id=WP_005768547.1;transl_table=11 NZ_CP103431.1 RefSeq gene 922346 923389 . - . ID=gene-NYQ15_RS04870;Name=NYQ15_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04870 NZ_CP103431.1 Protein Homology CDS 922346 923389 . - 0 ID=cds-WP_005768550.1;Parent=gene-NYQ15_RS04870;Dbxref=GenBank:WP_005768550.1;Name=WP_005768550.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819979.1;locus_tag=NYQ15_RS04870;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_005768550.1;transl_table=11 NZ_CP103431.1 RefSeq gene 923386 924078 . - . ID=gene-NYQ15_RS04875;Name=NYQ15_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04875 NZ_CP103431.1 Protein Homology CDS 923386 924078 . - 0 ID=cds-WP_005768552.1;Parent=gene-NYQ15_RS04875;Dbxref=GenBank:WP_005768552.1;Name=WP_005768552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819980.1;locus_tag=NYQ15_RS04875;product=hypothetical protein;protein_id=WP_005768552.1;transl_table=11 NZ_CP103431.1 RefSeq gene 924167 925330 . + . ID=gene-NYQ15_RS04880;Name=NYQ15_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04880 NZ_CP103431.1 Protein Homology CDS 924167 925330 . + 0 ID=cds-WP_005768554.1;Parent=gene-NYQ15_RS04880;Dbxref=GenBank:WP_005768554.1;Name=WP_005768554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819981.1;locus_tag=NYQ15_RS04880;product=isovaleryl-CoA dehydrogenase;protein_id=WP_005768554.1;transl_table=11 NZ_CP103431.1 RefSeq gene 925330 926514 . + . ID=gene-NYQ15_RS04885;Name=NYQ15_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04885 NZ_CP103431.1 Protein Homology CDS 925330 926514 . + 0 ID=cds-WP_005768556.1;Parent=gene-NYQ15_RS04885;Dbxref=GenBank:WP_005768556.1;Name=WP_005768556.1;Ontology_term=GO:0006631,GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819982.1;locus_tag=NYQ15_RS04885;product=acetyl-CoA C-acyltransferase;protein_id=WP_005768556.1;transl_table=11 NZ_CP103431.1 RefSeq gene 926539 928203 . + . ID=gene-NYQ15_RS04890;Name=NYQ15_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04890 NZ_CP103431.1 Protein Homology CDS 926539 928203 . + 0 ID=cds-WP_080735184.1;Parent=gene-NYQ15_RS04890;Dbxref=GenBank:WP_080735184.1;Name=WP_080735184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819983.2;locus_tag=NYQ15_RS04890;product=carboxyl transferase domain-containing protein;protein_id=WP_080735184.1;transl_table=11 NZ_CP103431.1 RefSeq gene 928223 928993 . + . ID=gene-NYQ15_RS04895;Name=NYQ15_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04895 NZ_CP103431.1 Protein Homology CDS 928223 928993 . + 0 ID=cds-WP_005768560.1;Parent=gene-NYQ15_RS04895;Dbxref=GenBank:WP_005768560.1;Name=WP_005768560.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819984.1;locus_tag=NYQ15_RS04895;product=enoyl-CoA hydratase-related protein;protein_id=WP_005768560.1;transl_table=11 NZ_CP103431.1 RefSeq gene 928995 930980 . + . ID=gene-NYQ15_RS04900;Name=NYQ15_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04900 NZ_CP103431.1 Protein Homology CDS 928995 930980 . + 0 ID=cds-WP_098953071.1;Parent=gene-NYQ15_RS04900;Dbxref=GenBank:WP_098953071.1;Name=WP_098953071.1;Ontology_term=GO:0005524,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819985.1;locus_tag=NYQ15_RS04900;product=acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha;protein_id=WP_098953071.1;transl_table=11 NZ_CP103431.1 RefSeq gene 931031 931498 . + . ID=gene-NYQ15_RS04905;Name=NYQ15_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04905 NZ_CP103431.1 Protein Homology CDS 931031 931498 . + 0 ID=cds-WP_005768564.1;Parent=gene-NYQ15_RS04905;Dbxref=GenBank:WP_005768564.1;Name=WP_005768564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819986.1;locus_tag=NYQ15_RS04905;product=CBU_0978 family Dot/Icm T4SS effector;protein_id=WP_005768564.1;transl_table=11 NZ_CP103431.1 RefSeq gene 931529 931831 . - . ID=gene-NYQ15_RS04910;Name=NYQ15_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04910 NZ_CP103431.1 Protein Homology CDS 931529 931831 . - 0 ID=cds-WP_005772371.1;Parent=gene-NYQ15_RS04910;Dbxref=GenBank:WP_005772371.1;Name=WP_005772371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819987.1;locus_tag=NYQ15_RS04910;product=lipoprotein;protein_id=WP_005772371.1;transl_table=11 NZ_CP103431.1 RefSeq gene 931920 932198 . - . ID=gene-NYQ15_RS04915;Name=NYQ15_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04915 NZ_CP103431.1 Protein Homology CDS 931920 932198 . - 0 ID=cds-WP_005768569.1;Parent=gene-NYQ15_RS04915;Dbxref=GenBank:WP_005768569.1;Name=WP_005768569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819988.1;locus_tag=NYQ15_RS04915;product=lipoprotein;protein_id=WP_005768569.1;transl_table=11 NZ_CP103431.1 RefSeq gene 932341 932433 . + . ID=gene-NYQ15_RS04920;Name=NYQ15_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04920 NZ_CP103431.1 Protein Homology CDS 932341 932433 . + 0 ID=cds-WP_010957932.1;Parent=gene-NYQ15_RS04920;Dbxref=GenBank:WP_010957932.1;Name=WP_010957932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819989.1;locus_tag=NYQ15_RS04920;product=hypothetical protein;protein_id=WP_010957932.1;transl_table=11 NZ_CP103431.1 RefSeq gene 932502 933584 . + . ID=gene-NYQ15_RS04925;Name=NYQ15_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04925 NZ_CP103431.1 Protein Homology CDS 932502 933584 . + 0 ID=cds-WP_005772345.1;Parent=gene-NYQ15_RS04925;Dbxref=GenBank:WP_005772345.1;Name=WP_005772345.1;Ontology_term=GO:0009073,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819990.1;locus_tag=NYQ15_RS04925;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_005772345.1;transl_table=11 NZ_CP103431.1 RefSeq gene 933574 933876 . + . ID=gene-NYQ15_RS04930;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=NYQ15_RS04930 NZ_CP103431.1 Protein Homology CDS 933574 933876 . + 0 ID=cds-WP_005768571.1;Parent=gene-NYQ15_RS04930;Dbxref=GenBank:WP_005768571.1;Name=WP_005768571.1;Ontology_term=GO:0009094,GO:0004106,GO:0005737;gbkey=CDS;gene=pheA;go_component=cytoplasm|0005737||IEA;go_function=chorismate mutase activity|0004106||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: protein motif:HMM:NF013939.5;locus_tag=NYQ15_RS04930;product=chorismate mutase;protein_id=WP_005768571.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 933873 934447 . + . ID=gene-NYQ15_RS04940;Name=NYQ15_RS04940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS04940;pseudo=true NZ_CP103431.1 Protein Homology CDS 933873 934447 . + 0 ID=cds-NYQ15_RS04940;Parent=gene-NYQ15_RS04940;Note=frameshifted;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: protein motif:HMM:NF012998.5;locus_tag=NYQ15_RS04940;product=prephenate dehydratase domain-containing protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 934431 935207 . + . ID=gene-NYQ15_RS04945;Name=NYQ15_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04945 NZ_CP103431.1 Protein Homology CDS 934431 935207 . + 0 ID=cds-WP_005768573.1;Parent=gene-NYQ15_RS04945;Dbxref=GenBank:WP_005768573.1;Name=WP_005768573.1;Ontology_term=GO:0006571,GO:0008977,GO:0033730,GO:0070403;gbkey=CDS;go_function=prephenate dehydrogenase (NAD+) activity|0008977||IEA,arogenate dehydrogenase (NADP+) activity|0033730||IEA,NAD+ binding|0070403||IEA;go_process=tyrosine biosynthetic process|0006571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819991.1;locus_tag=NYQ15_RS04945;product=prephenate dehydrogenase/arogenate dehydrogenase family protein;protein_id=WP_005768573.1;transl_table=11 NZ_CP103431.1 RefSeq gene 935236 935994 . + . ID=gene-NYQ15_RS04950;Name=NYQ15_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04950 NZ_CP103431.1 Protein Homology CDS 935236 935994 . + 0 ID=cds-WP_005772360.1;Parent=gene-NYQ15_RS04950;Dbxref=GenBank:WP_005772360.1;Name=WP_005772360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819992.1;locus_tag=NYQ15_RS04950;product=hypothetical protein;protein_id=WP_005772360.1;transl_table=11 NZ_CP103431.1 RefSeq gene 936051 936863 . - . ID=gene-NYQ15_RS04955;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=NYQ15_RS04955 NZ_CP103431.1 Protein Homology CDS 936051 936863 . - 0 ID=cds-WP_259431086.1;Parent=gene-NYQ15_RS04955;Dbxref=GenBank:WP_259431086.1;Name=WP_259431086.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819993.2;locus_tag=NYQ15_RS04955;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_259431086.1;transl_table=11 NZ_CP103431.1 RefSeq gene 936897 937694 . + . ID=gene-NYQ15_RS04960;Name=NYQ15_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04960 NZ_CP103431.1 Protein Homology CDS 936897 937694 . + 0 ID=cds-WP_098953072.1;Parent=gene-NYQ15_RS04960;Dbxref=GenBank:WP_098953072.1;Name=WP_098953072.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819994.2;locus_tag=NYQ15_RS04960;product=septal ring lytic transglycosylase RlpA family protein;protein_id=WP_098953072.1;transl_table=11 NZ_CP103431.1 RefSeq gene 937698 938387 . + . ID=gene-NYQ15_RS04965;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=NYQ15_RS04965 NZ_CP103431.1 Protein Homology CDS 937698 938387 . + 0 ID=cds-WP_005768577.1;Parent=gene-NYQ15_RS04965;Dbxref=GenBank:WP_005768577.1;Name=WP_005768577.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819995.1;locus_tag=NYQ15_RS04965;product=uracil-DNA glycosylase;protein_id=WP_005768577.1;transl_table=11 NZ_CP103431.1 RefSeq gene 938496 941561 . - . ID=gene-NYQ15_RS04970;Name=NYQ15_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04970 NZ_CP103431.1 GeneMarkS-2+ CDS 938496 941561 . - 0 ID=cds-WP_259431087.1;Parent=gene-NYQ15_RS04970;Dbxref=GenBank:WP_259431087.1;Name=WP_259431087.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS04970;product=hypothetical protein;protein_id=WP_259431087.1;transl_table=11 NZ_CP103431.1 RefSeq gene 941677 941760 . + . ID=gene-NYQ15_RS04975;Name=NYQ15_RS04975;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS04975 NZ_CP103431.1 tRNAscan-SE tRNA 941677 941760 . + . ID=rna-NYQ15_RS04975;Parent=gene-NYQ15_RS04975;anticodon=(pos:941711..941713);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS04975;product=tRNA-Leu NZ_CP103431.1 tRNAscan-SE exon 941677 941760 . + . ID=exon-NYQ15_RS04975-1;Parent=rna-NYQ15_RS04975;anticodon=(pos:941711..941713);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS04975;product=tRNA-Leu NZ_CP103431.1 RefSeq pseudogene 941790 942302 . + . ID=gene-NYQ15_RS04980;Name=def;gbkey=Gene;gene=def;gene_biotype=pseudogene;locus_tag=NYQ15_RS04980;pseudo=true NZ_CP103431.1 Protein Homology CDS 941790 942302 . + 0 ID=cds-NYQ15_RS04980;Parent=gene-NYQ15_RS04980;Note=internal stop;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820000.1;locus_tag=NYQ15_RS04980;product=peptide deformylase;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 942635 942904 . + . ID=gene-NYQ15_RS04985;Name=NYQ15_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04985 NZ_CP103431.1 Protein Homology CDS 942635 942904 . + 0 ID=cds-WP_005768581.1;Parent=gene-NYQ15_RS04985;Dbxref=GenBank:WP_005768581.1;Name=WP_005768581.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768581.1;locus_tag=NYQ15_RS04985;product=cytochrome c oxidase subunit II transmembrane domain-containing protein;protein_id=WP_005768581.1;transl_table=11 NZ_CP103431.1 RefSeq gene 942901 943818 . + . ID=gene-NYQ15_RS04990;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=NYQ15_RS04990 NZ_CP103431.1 Protein Homology CDS 942901 943818 . + 0 ID=cds-WP_005768584.1;Parent=gene-NYQ15_RS04990;Dbxref=GenBank:WP_005768584.1;Name=WP_005768584.1;Ontology_term=GO:0006783,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820003.1;locus_tag=NYQ15_RS04990;product=heme o synthase;protein_id=WP_005768584.1;transl_table=11 NZ_CP103431.1 RefSeq gene 943827 943943 . + . ID=gene-NYQ15_RS04995;Name=NYQ15_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS04995 NZ_CP103431.1 Protein Homology CDS 943827 943943 . + 0 ID=cds-WP_010957942.1;Parent=gene-NYQ15_RS04995;Dbxref=GenBank:WP_010957942.1;Name=WP_010957942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820004.2;locus_tag=NYQ15_RS04995;product=lipoprotein;protein_id=WP_010957942.1;transl_table=11 NZ_CP103431.1 RefSeq gene 943976 945283 . - . ID=gene-NYQ15_RS05000;Name=NYQ15_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05000 NZ_CP103431.1 Protein Homology CDS 943976 945283 . - 0 ID=cds-WP_005768588.1;Parent=gene-NYQ15_RS05000;Dbxref=GenBank:WP_005768588.1;Name=WP_005768588.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820005.1;locus_tag=NYQ15_RS05000;product=adenylosuccinate synthase;protein_id=WP_005768588.1;transl_table=11 NZ_CP103431.1 RefSeq gene 945304 946668 . - . ID=gene-NYQ15_RS05005;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=NYQ15_RS05005 NZ_CP103431.1 Protein Homology CDS 945304 946668 . - 0 ID=cds-WP_005772374.1;Parent=gene-NYQ15_RS05005;Dbxref=GenBank:WP_005772374.1;Name=WP_005772374.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820006.2;locus_tag=NYQ15_RS05005;product=ribosome rescue GTPase HflX;protein_id=WP_005772374.1;transl_table=11 NZ_CP103431.1 RefSeq gene 946665 947366 . - . ID=gene-NYQ15_RS05010;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=NYQ15_RS05010 NZ_CP103431.1 Protein Homology CDS 946665 947366 . - 0 ID=cds-WP_005772368.1;Parent=gene-NYQ15_RS05010;Dbxref=GenBank:WP_005772368.1;Name=WP_005772368.1;Ontology_term=GO:0042953,GO:0005524,GO:0043190;gbkey=CDS;gene=lolD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820007.1;locus_tag=NYQ15_RS05010;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_005772368.1;transl_table=11 NZ_CP103431.1 RefSeq gene 947359 948603 . - . ID=gene-NYQ15_RS05015;Name=NYQ15_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05015 NZ_CP103431.1 Protein Homology CDS 947359 948603 . - 0 ID=cds-WP_005768593.1;Parent=gene-NYQ15_RS05015;Dbxref=GenBank:WP_005768593.1;Name=WP_005768593.1;Ontology_term=GO:0042953,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820008.1;locus_tag=NYQ15_RS05015;product=lipoprotein-releasing ABC transporter permease subunit;protein_id=WP_005768593.1;transl_table=11 NZ_CP103431.1 RefSeq gene 948726 949697 . + . ID=gene-NYQ15_RS05020;Name=NYQ15_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05020 NZ_CP103431.1 Protein Homology CDS 948726 949697 . + 0 ID=cds-WP_005768595.1;Parent=gene-NYQ15_RS05020;Dbxref=GenBank:WP_005768595.1;Name=WP_005768595.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820009.1;locus_tag=NYQ15_RS05020;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_005768595.1;transl_table=11 NZ_CP103431.1 RefSeq gene 949625 950353 . - . ID=gene-NYQ15_RS05025;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=NYQ15_RS05025 NZ_CP103431.1 Protein Homology CDS 949625 950353 . - 0 ID=cds-WP_005772341.1;Parent=gene-NYQ15_RS05025;Dbxref=GenBank:WP_005772341.1;Name=WP_005772341.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820010.1;locus_tag=NYQ15_RS05025;product=dethiobiotin synthase;protein_id=WP_005772341.1;transl_table=11 NZ_CP103431.1 RefSeq gene 950350 951096 . - . ID=gene-NYQ15_RS05030;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=NYQ15_RS05030 NZ_CP103431.1 Protein Homology CDS 950350 951096 . - 0 ID=cds-WP_010957947.1;Parent=gene-NYQ15_RS05030;Dbxref=GenBank:WP_010957947.1;Name=WP_010957947.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820011.1;locus_tag=NYQ15_RS05030;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_010957947.1;transl_table=11 NZ_CP103431.1 RefSeq gene 951086 951790 . - . ID=gene-NYQ15_RS05035;Name=NYQ15_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05035 NZ_CP103431.1 Protein Homology CDS 951086 951790 . - 0 ID=cds-WP_005772373.1;Parent=gene-NYQ15_RS05035;Dbxref=GenBank:WP_005772373.1;Name=WP_005772373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820012.1;locus_tag=NYQ15_RS05035;product=alpha/beta fold hydrolase;protein_id=WP_005772373.1;transl_table=11 NZ_CP103431.1 RefSeq gene 951784 952938 . - . ID=gene-NYQ15_RS05040;Name=NYQ15_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05040 NZ_CP103431.1 Protein Homology CDS 951784 952938 . - 0 ID=cds-WP_259431088.1;Parent=gene-NYQ15_RS05040;Dbxref=GenBank:WP_259431088.1;Name=WP_259431088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820013.1;locus_tag=NYQ15_RS05040;product=8-amino-7-oxononanoate synthase;protein_id=WP_259431088.1;transl_table=11 NZ_CP103431.1 RefSeq gene 952925 953890 . - . ID=gene-NYQ15_RS05045;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=NYQ15_RS05045 NZ_CP103431.1 Protein Homology CDS 952925 953890 . - 0 ID=cds-WP_005768604.1;Parent=gene-NYQ15_RS05045;Dbxref=GenBank:WP_005768604.1;Name=WP_005768604.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820014.1;locus_tag=NYQ15_RS05045;product=biotin synthase BioB;protein_id=WP_005768604.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 954060 954145 . + . ID=gene-NYQ15_RS10595;Name=NYQ15_RS10595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS10595;partial=true;pseudo=true;start_range=.,954060 NZ_CP103431.1 Protein Homology CDS 954060 954145 . + 0 ID=cds-NYQ15_RS10595;Parent=gene-NYQ15_RS10595;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820826.1;locus_tag=NYQ15_RS10595;partial=true;product=hypothetical protein;pseudo=true;start_range=.,954060;transl_table=11 NZ_CP103431.1 RefSeq gene 954259 955587 . + . ID=gene-NYQ15_RS05050;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=NYQ15_RS05050 NZ_CP103431.1 Protein Homology CDS 954259 955587 . + 0 ID=cds-WP_005768607.1;Parent=gene-NYQ15_RS05050;Dbxref=GenBank:WP_005768607.1;Name=WP_005768607.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820015.1;locus_tag=NYQ15_RS05050;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_005768607.1;transl_table=11 NZ_CP103431.1 RefSeq gene 955588 955962 . + . ID=gene-NYQ15_RS05055;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=NYQ15_RS05055 NZ_CP103431.1 Protein Homology CDS 955588 955962 . + 0 ID=cds-WP_005768609.1;Parent=gene-NYQ15_RS05055;Dbxref=GenBank:WP_005768609.1;Name=WP_005768609.1;Ontology_term=GO:1903424,GO:1903425,GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;go_function=fluoride transmembrane transporter activity|1903425||IEA;go_process=fluoride transmembrane transport|1903424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996883.1;locus_tag=NYQ15_RS05055;product=fluoride efflux transporter CrcB;protein_id=WP_005768609.1;transl_table=11 NZ_CP103431.1 RefSeq gene 955959 956273 . + . ID=gene-NYQ15_RS05060;Name=NYQ15_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05060 NZ_CP103431.1 Protein Homology CDS 955959 956273 . + 0 ID=cds-WP_005768610.1;Parent=gene-NYQ15_RS05060;Dbxref=GenBank:WP_005768610.1;Name=WP_005768610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220372.1;locus_tag=NYQ15_RS05060;product=DUF190 domain-containing protein;protein_id=WP_005768610.1;transl_table=11 NZ_CP103431.1 RefSeq gene 956324 957736 . - . ID=gene-NYQ15_RS05065;Name=NYQ15_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05065 NZ_CP103431.1 Protein Homology CDS 956324 957736 . - 0 ID=cds-WP_005772347.1;Parent=gene-NYQ15_RS05065;Dbxref=GenBank:WP_005772347.1;Name=WP_005772347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768612.1;locus_tag=NYQ15_RS05065;product=carotenoid oxygenase family protein;protein_id=WP_005772347.1;transl_table=11 NZ_CP103431.1 RefSeq gene 957932 958330 . + . ID=gene-NYQ15_RS05070;Name=NYQ15_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05070 NZ_CP103431.1 GeneMarkS-2+ CDS 957932 958330 . + 0 ID=cds-WP_005768615.1;Parent=gene-NYQ15_RS05070;Dbxref=GenBank:WP_005768615.1;Name=WP_005768615.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS05070;product=hypothetical protein;protein_id=WP_005768615.1;transl_table=11 NZ_CP103431.1 RefSeq gene 958334 960196 . + . ID=gene-NYQ15_RS05075;Name=NYQ15_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05075 NZ_CP103431.1 GeneMarkS-2+ CDS 958334 960196 . + 0 ID=cds-WP_005772361.1;Parent=gene-NYQ15_RS05075;Dbxref=GenBank:WP_005772361.1;Name=WP_005772361.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS05075;product=hypothetical protein;protein_id=WP_005772361.1;transl_table=11 NZ_CP103431.1 RefSeq gene 960335 960405 . + . ID=gene-NYQ15_RS05080;Name=NYQ15_RS05080;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS05080 NZ_CP103431.1 tRNAscan-SE tRNA 960335 960405 . + . ID=rna-NYQ15_RS05080;Parent=gene-NYQ15_RS05080;anticodon=(pos:960367..960369);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS05080;product=tRNA-Cys NZ_CP103431.1 tRNAscan-SE exon 960335 960405 . + . ID=exon-NYQ15_RS05080-1;Parent=rna-NYQ15_RS05080;anticodon=(pos:960367..960369);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS05080;product=tRNA-Cys NZ_CP103431.1 RefSeq gene 960449 960536 . + . ID=gene-NYQ15_RS05085;Name=NYQ15_RS05085;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS05085 NZ_CP103431.1 tRNAscan-SE tRNA 960449 960536 . + . ID=rna-NYQ15_RS05085;Parent=gene-NYQ15_RS05085;anticodon=(pos:960483..960485);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS05085;product=tRNA-Leu NZ_CP103431.1 tRNAscan-SE exon 960449 960536 . + . ID=exon-NYQ15_RS05085-1;Parent=rna-NYQ15_RS05085;anticodon=(pos:960483..960485);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS05085;product=tRNA-Leu NZ_CP103431.1 RefSeq pseudogene 960615 960911 . - . ID=gene-NYQ15_RS05090;Name=NYQ15_RS05090;end_range=960911,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS05090;partial=true;pseudo=true NZ_CP103431.1 Protein Homology CDS 960615 960911 . - 0 ID=cds-NYQ15_RS05090;Parent=gene-NYQ15_RS05090;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=960911,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019234436.1;locus_tag=NYQ15_RS05090;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 961151 961345 . + . ID=gene-NYQ15_RS05095;Name=NYQ15_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05095 NZ_CP103431.1 Protein Homology CDS 961151 961345 . + 0 ID=cds-WP_005768621.1;Parent=gene-NYQ15_RS05095;Dbxref=GenBank:WP_005768621.1;Name=WP_005768621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820020.1;locus_tag=NYQ15_RS05095;product=hypothetical protein;protein_id=WP_005768621.1;transl_table=11 NZ_CP103431.1 RefSeq gene 961431 961883 . + . ID=gene-NYQ15_RS05100;Name=NYQ15_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05100 NZ_CP103431.1 GeneMarkS-2+ CDS 961431 961883 . + 0 ID=cds-WP_259431089.1;Parent=gene-NYQ15_RS05100;Dbxref=GenBank:WP_259431089.1;Name=WP_259431089.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS05100;product=hypothetical protein;protein_id=WP_259431089.1;transl_table=11 NZ_CP103431.1 RefSeq gene 961811 962356 . + . ID=gene-NYQ15_RS05105;Name=NYQ15_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05105 NZ_CP103431.1 Protein Homology CDS 961811 962356 . + 0 ID=cds-WP_259431090.1;Parent=gene-NYQ15_RS05105;Dbxref=GenBank:WP_259431090.1;Name=WP_259431090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820021.1;locus_tag=NYQ15_RS05105;product=DUF3800 domain-containing protein;protein_id=WP_259431090.1;transl_table=11 NZ_CP103431.1 RefSeq gene 962655 962807 . + . ID=gene-NYQ15_RS05110;Name=NYQ15_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05110 NZ_CP103431.1 Protein Homology CDS 962655 962807 . + 0 ID=cds-WP_005768626.1;Parent=gene-NYQ15_RS05110;Dbxref=GenBank:WP_005768626.1;Name=WP_005768626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820022.1;locus_tag=NYQ15_RS05110;product=hypothetical protein;protein_id=WP_005768626.1;transl_table=11 NZ_CP103431.1 RefSeq gene 962922 964064 . + . ID=gene-NYQ15_RS05115;Name=NYQ15_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05115 NZ_CP103431.1 Protein Homology CDS 962922 964064 . + 0 ID=cds-WP_259411809.1;Parent=gene-NYQ15_RS05115;Dbxref=GenBank:WP_259411809.1;Name=WP_259411809.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820023.1;locus_tag=NYQ15_RS05115;product=ATP-binding protein;protein_id=WP_259411809.1;transl_table=11 NZ_CP103431.1 RefSeq gene 964242 964598 . - . ID=gene-NYQ15_RS05120;Name=NYQ15_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05120 NZ_CP103431.1 Protein Homology CDS 964242 964598 . - 0 ID=cds-WP_259431091.1;Parent=gene-NYQ15_RS05120;Dbxref=GenBank:WP_259431091.1;Name=WP_259431091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820024.1;locus_tag=NYQ15_RS05120;product=DUF4440 domain-containing protein;protein_id=WP_259431091.1;transl_table=11 NZ_CP103431.1 RefSeq gene 964639 964857 . - . ID=gene-NYQ15_RS05125;Name=NYQ15_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05125 NZ_CP103431.1 Protein Homology CDS 964639 964857 . - 0 ID=cds-WP_005768632.1;Parent=gene-NYQ15_RS05125;Dbxref=GenBank:WP_005768632.1;Name=WP_005768632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820025.2;locus_tag=NYQ15_RS05125;product=hypothetical protein;protein_id=WP_005768632.1;transl_table=11 NZ_CP103431.1 RefSeq gene 964989 965097 . + . ID=gene-NYQ15_RS05130;Name=NYQ15_RS05130;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS05130 NZ_CP103431.1 tRNAscan-SE tRNA 964989 965097 . + . ID=rna-NYQ15_RS05130;Parent=gene-NYQ15_RS05130;anticodon=(pos:965043..965045);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS05130;product=tRNA-Leu NZ_CP103431.1 tRNAscan-SE exon 964989 965097 . + . ID=exon-NYQ15_RS05130-1;Parent=rna-NYQ15_RS05130;anticodon=(pos:965043..965045);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS05130;product=tRNA-Leu NZ_CP103431.1 RefSeq gene 965519 965962 . + . ID=gene-NYQ15_RS05140;Name=NYQ15_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05140 NZ_CP103431.1 Protein Homology CDS 965519 965962 . + 0 ID=cds-WP_010957957.1;Parent=gene-NYQ15_RS05140;Dbxref=GenBank:WP_010957957.1;Name=WP_010957957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820027.1;locus_tag=NYQ15_RS05140;product=nucleotidyltransferase substrate binding protein;protein_id=WP_010957957.1;transl_table=11 NZ_CP103431.1 RefSeq gene 965955 966254 . + . ID=gene-NYQ15_RS05145;Name=NYQ15_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05145 NZ_CP103431.1 Protein Homology CDS 965955 966254 . + 0 ID=cds-WP_259431092.1;Parent=gene-NYQ15_RS05145;Dbxref=GenBank:WP_259431092.1;Name=WP_259431092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820028.1;locus_tag=NYQ15_RS05145;product=nucleotidyltransferase family protein;protein_id=WP_259431092.1;transl_table=11 NZ_CP103431.1 RefSeq gene 967048 967995 . + . ID=gene-NYQ15_RS05150;Name=NYQ15_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05150 NZ_CP103431.1 Protein Homology CDS 967048 967995 . + 0 ID=cds-WP_005768640.1;Parent=gene-NYQ15_RS05150;Dbxref=GenBank:WP_005768640.1;Name=WP_005768640.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996880.1;locus_tag=NYQ15_RS05150;product=NADP-dependent oxidoreductase;protein_id=WP_005768640.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 968001 968280 . + . ID=gene-NYQ15_RS05155;Name=NYQ15_RS05155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS05155;pseudo=true NZ_CP103431.1 Protein Homology CDS 968001 968280 . + 0 ID=cds-NYQ15_RS05155;Parent=gene-NYQ15_RS05155;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332978.1;locus_tag=NYQ15_RS05155;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 968348 970258 . - . ID=gene-NYQ15_RS05160;Name=ankH;end_range=970258,.;gbkey=Gene;gene=ankH;gene_biotype=protein_coding;locus_tag=NYQ15_RS05160;partial=true NZ_CP103431.1 Protein Homology CDS 968348 970258 . - 0 ID=cds-WP_259431093.1;Parent=gene-NYQ15_RS05160;Dbxref=GenBank:WP_259431093.1;Name=WP_259431093.1;end_range=970258,.;gbkey=CDS;gene=ankH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996878.1;locus_tag=NYQ15_RS05160;partial=true;product=Dot/Icm T4SS effector AnkH;protein_id=WP_259431093.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 970351 970800 . - . ID=gene-NYQ15_RS05165;Name=NYQ15_RS05165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS05165;partial=true;pseudo=true;start_range=.,970351 NZ_CP103431.1 Protein Homology CDS 970351 970800 . - 0 ID=cds-NYQ15_RS05165;Parent=gene-NYQ15_RS05165;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996878.1;locus_tag=NYQ15_RS05165;partial=true;product=hypothetical protein;pseudo=true;start_range=.,970351;transl_table=11 NZ_CP103431.1 RefSeq gene 971621 972720 . + . ID=gene-NYQ15_RS05175;Name=NYQ15_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05175;partial=true;start_range=.,971621 NZ_CP103431.1 Protein Homology CDS 971621 972720 . + 2 ID=cds-WP_259431094.1;Parent=gene-NYQ15_RS05175;Dbxref=GenBank:WP_259431094.1;Name=WP_259431094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820033.1;locus_tag=NYQ15_RS05175;partial=true;product=DUF853 domain-containing protein;protein_id=WP_259431094.1;start_range=.,971621;transl_table=11 NZ_CP103431.1 RefSeq gene 972736 973638 . - . ID=gene-NYQ15_RS05180;Name=NYQ15_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05180 NZ_CP103431.1 Protein Homology CDS 972736 973638 . - 0 ID=cds-WP_032074922.1;Parent=gene-NYQ15_RS05180;Dbxref=GenBank:WP_032074922.1;Name=WP_032074922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820034.1;locus_tag=NYQ15_RS05180;product=transglutaminase-like domain-containing protein;protein_id=WP_032074922.1;transl_table=11 NZ_CP103431.1 RefSeq gene 973649 974449 . - . ID=gene-NYQ15_RS05185;Name=NYQ15_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05185 NZ_CP103431.1 Protein Homology CDS 973649 974449 . - 0 ID=cds-WP_098953075.1;Parent=gene-NYQ15_RS05185;Dbxref=GenBank:WP_098953075.1;Name=WP_098953075.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.5;locus_tag=NYQ15_RS05185;product=AMP-binding protein;protein_id=WP_098953075.1;transl_table=11 NZ_CP103431.1 RefSeq gene 974506 975060 . - . ID=gene-NYQ15_RS05190;Name=NYQ15_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05190 NZ_CP103431.1 Protein Homology CDS 974506 975060 . - 0 ID=cds-WP_050497421.1;Parent=gene-NYQ15_RS05190;Dbxref=GenBank:WP_050497421.1;Name=WP_050497421.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014803.5;locus_tag=NYQ15_RS05190;product=hypothetical protein;protein_id=WP_050497421.1;transl_table=11 NZ_CP103431.1 RefSeq gene 975483 975923 . + . ID=gene-NYQ15_RS05195;Name=NYQ15_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05195 NZ_CP103431.1 Protein Homology CDS 975483 975923 . + 0 ID=cds-WP_032074920.1;Parent=gene-NYQ15_RS05195;Dbxref=GenBank:WP_032074920.1;Name=WP_032074920.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820035.2;locus_tag=NYQ15_RS05195;product=glycoside hydrolase family protein;protein_id=WP_032074920.1;transl_table=11 NZ_CP103431.1 RefSeq gene 976217 976780 . + . ID=gene-NYQ15_RS05200;Name=NYQ15_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05200 NZ_CP103431.1 Protein Homology CDS 976217 976780 . + 0 ID=cds-WP_098953076.1;Parent=gene-NYQ15_RS05200;Dbxref=GenBank:WP_098953076.1;Name=WP_098953076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220363.1;locus_tag=NYQ15_RS05200;product=hypothetical protein;protein_id=WP_098953076.1;transl_table=11 NZ_CP103431.1 RefSeq gene 976879 976954 . - . ID=gene-NYQ15_RS05205;Name=NYQ15_RS05205;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS05205 NZ_CP103431.1 tRNAscan-SE tRNA 976879 976954 . - . ID=rna-NYQ15_RS05205;Parent=gene-NYQ15_RS05205;anticodon=(pos:complement(976919..976921));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS05205;product=tRNA-Gly NZ_CP103431.1 tRNAscan-SE exon 976879 976954 . - . ID=exon-NYQ15_RS05205-1;Parent=rna-NYQ15_RS05205;anticodon=(pos:complement(976919..976921));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS05205;product=tRNA-Gly NZ_CP103431.1 RefSeq gene 976972 977607 . - . ID=gene-NYQ15_RS05210;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=NYQ15_RS05210 NZ_CP103431.1 Protein Homology CDS 976972 977607 . - 0 ID=cds-WP_012570725.1;Parent=gene-NYQ15_RS05210;Dbxref=GenBank:WP_012570725.1;Name=WP_012570725.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820038.2;locus_tag=NYQ15_RS05210;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_012570725.1;transl_table=11 NZ_CP103431.1 RefSeq gene 977654 979060 . + . ID=gene-NYQ15_RS05215;Name=NYQ15_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05215 NZ_CP103431.1 Protein Homology CDS 977654 979060 . + 0 ID=cds-WP_005768656.1;Parent=gene-NYQ15_RS05215;Dbxref=GenBank:WP_005768656.1;Name=WP_005768656.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820039.1;locus_tag=NYQ15_RS05215;product=nicotinate phosphoribosyltransferase;protein_id=WP_005768656.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 979057 979314 . + . ID=gene-NYQ15_RS05220;Name=NYQ15_RS05220;end_range=979314,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS05220;partial=true;pseudo=true NZ_CP103431.1 Protein Homology CDS 979057 979314 . + 0 ID=cds-NYQ15_RS05220;Parent=gene-NYQ15_RS05220;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=979314,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014840919.1;locus_tag=NYQ15_RS05220;partial=true;product=nicotinamidase;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 979250 980731 . + . ID=gene-NYQ15_RS05225;Name=NYQ15_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05225 NZ_CP103431.1 Protein Homology CDS 979250 980731 . + 0 ID=cds-WP_259431096.1;Parent=gene-NYQ15_RS05225;Dbxref=GenBank:WP_259431096.1;Name=WP_259431096.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013069.5;locus_tag=NYQ15_RS05225;product=efflux RND transporter permease subunit;protein_id=WP_259431096.1;transl_table=11 NZ_CP103431.1 RefSeq gene 980835 980911 . + . ID=gene-NYQ15_RS05230;Name=NYQ15_RS05230;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS05230 NZ_CP103431.1 tRNAscan-SE tRNA 980835 980911 . + . ID=rna-NYQ15_RS05230;Parent=gene-NYQ15_RS05230;anticodon=(pos:980869..980871);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS05230;product=tRNA-Arg NZ_CP103431.1 tRNAscan-SE exon 980835 980911 . + . ID=exon-NYQ15_RS05230-1;Parent=rna-NYQ15_RS05230;anticodon=(pos:980869..980871);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS05230;product=tRNA-Arg NZ_CP103431.1 RefSeq gene 981181 981516 . - . ID=gene-NYQ15_RS05235;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=NYQ15_RS05235 NZ_CP103431.1 Protein Homology CDS 981181 981516 . - 0 ID=cds-WP_010957966.1;Parent=gene-NYQ15_RS05235;Dbxref=GenBank:WP_010957966.1;Name=WP_010957966.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoD;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332979.1;locus_tag=NYQ15_RS05235;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_010957966.1;transl_table=11 NZ_CP103431.1 RefSeq gene 981513 982109 . - . ID=gene-NYQ15_RS05240;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;locus_tag=NYQ15_RS05240 NZ_CP103431.1 Protein Homology CDS 981513 982109 . - 0 ID=cds-WP_005768678.1;Parent=gene-NYQ15_RS05240;Dbxref=GenBank:WP_005768678.1;Name=WP_005768678.1;Ontology_term=GO:0019646,GO:0009486;gbkey=CDS;gene=cyoC;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820040.1;locus_tag=NYQ15_RS05240;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_005768678.1;transl_table=11 NZ_CP103431.1 RefSeq gene 982106 984112 . - . ID=gene-NYQ15_RS05245;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=NYQ15_RS05245 NZ_CP103431.1 Protein Homology CDS 982106 984112 . - 0 ID=cds-WP_005768680.1;Parent=gene-NYQ15_RS05245;Dbxref=GenBank:WP_005768680.1;Name=WP_005768680.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoB;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820041.1;locus_tag=NYQ15_RS05245;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_005768680.1;transl_table=11 NZ_CP103431.1 RefSeq gene 984132 985028 . - . ID=gene-NYQ15_RS05250;Name=NYQ15_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05250 NZ_CP103431.1 Protein Homology CDS 984132 985028 . - 0 ID=cds-WP_005772998.1;Parent=gene-NYQ15_RS05250;Dbxref=GenBank:WP_005772998.1;Name=WP_005772998.1;Ontology_term=GO:0022900,GO:0009486,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820042.1;locus_tag=NYQ15_RS05250;product=COX aromatic rich motif-containing protein;protein_id=WP_005772998.1;transl_table=11 NZ_CP103431.1 RefSeq gene 985036 985191 . - . ID=gene-NYQ15_RS05255;Name=NYQ15_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05255 NZ_CP103431.1 Protein Homology CDS 985036 985191 . - 0 ID=cds-WP_005768684.1;Parent=gene-NYQ15_RS05255;Dbxref=GenBank:WP_005768684.1;Name=WP_005768684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820043.1;locus_tag=NYQ15_RS05255;product=hypothetical protein;protein_id=WP_005768684.1;transl_table=11 NZ_CP103431.1 RefSeq gene 985185 985586 . + . ID=gene-NYQ15_RS05260;Name=NYQ15_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05260 NZ_CP103431.1 Protein Homology CDS 985185 985586 . + 0 ID=cds-WP_005768686.1;Parent=gene-NYQ15_RS05260;Dbxref=GenBank:WP_005768686.1;Name=WP_005768686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820044.1;locus_tag=NYQ15_RS05260;product=hypothetical protein;protein_id=WP_005768686.1;transl_table=11 NZ_CP103431.1 RefSeq gene 985629 986273 . - . ID=gene-NYQ15_RS05265;Name=NYQ15_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05265 NZ_CP103431.1 Protein Homology CDS 985629 986273 . - 0 ID=cds-WP_005768687.1;Parent=gene-NYQ15_RS05265;Dbxref=GenBank:WP_005768687.1;Name=WP_005768687.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820045.1;locus_tag=NYQ15_RS05265;product=response regulator;protein_id=WP_005768687.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 986981 988728 . + . ID=gene-NYQ15_RS05270;Name=coxDFB2;gbkey=Gene;gene=coxDFB2;gene_biotype=pseudogene;locus_tag=NYQ15_RS05270;pseudo=true NZ_CP103431.1 Protein Homology CDS 986981 988728 . + 0 ID=cds-NYQ15_RS05270;Parent=gene-NYQ15_RS05270;Note=frameshifted;gbkey=CDS;gene=coxDFB2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570018.1;locus_tag=NYQ15_RS05270;product=Dot/Icm T4SS effector CoxDFB2;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 988798 988911 . - . ID=gene-NYQ15_RS05275;Name=NYQ15_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05275 NZ_CP103431.1 Protein Homology CDS 988798 988911 . - 0 ID=cds-WP_005768694.1;Parent=gene-NYQ15_RS05275;Dbxref=GenBank:WP_005768694.1;Name=WP_005768694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332980.1;locus_tag=NYQ15_RS05275;product=hypothetical protein;protein_id=WP_005768694.1;transl_table=11 NZ_CP103431.1 RefSeq gene 989060 989649 . + . ID=gene-NYQ15_RS05280;Name=NYQ15_RS05280;end_range=989649,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05280;partial=true NZ_CP103431.1 Protein Homology CDS 989060 989649 . + 0 ID=cds-WP_259431097.1;Parent=gene-NYQ15_RS05280;Dbxref=GenBank:WP_259431097.1;Name=WP_259431097.1;end_range=989649,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768697.1;locus_tag=NYQ15_RS05280;partial=true;product=DUF1601 domain-containing protein;protein_id=WP_259431097.1;transl_table=11 NZ_CP103431.1 RefSeq gene 989884 990637 . + . ID=gene-NYQ15_RS05285;Name=NYQ15_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05285;partial=true;start_range=.,989884 NZ_CP103431.1 Protein Homology CDS 989884 990637 . + 1 ID=cds-WP_259411814.1;Parent=gene-NYQ15_RS05285;Dbxref=GenBank:WP_259411814.1;Name=WP_259411814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768697.1;locus_tag=NYQ15_RS05285;partial=true;product=DUF1601 domain-containing protein;protein_id=WP_259411814.1;start_range=.,989884;transl_table=11 NZ_CP103431.1 RefSeq gene 991035 993305 . - . ID=gene-NYQ15_RS05290;Name=NYQ15_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05290 NZ_CP103431.1 Protein Homology CDS 991035 993305 . - 0 ID=cds-WP_172435538.1;Parent=gene-NYQ15_RS05290;Dbxref=GenBank:WP_172435538.1;Name=WP_172435538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570724.1;locus_tag=NYQ15_RS05290;product=CbuK_0790 family Dot/Icm T4SS effector;protein_id=WP_172435538.1;transl_table=11 NZ_CP103431.1 RefSeq gene 993544 993635 . - . ID=gene-NYQ15_RS05295;Name=NYQ15_RS05295;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS05295 NZ_CP103431.1 tRNAscan-SE tRNA 993544 993635 . - . ID=rna-NYQ15_RS05295;Parent=gene-NYQ15_RS05295;anticodon=(pos:complement(993599..993601));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS05295;product=tRNA-Ser NZ_CP103431.1 tRNAscan-SE exon 993544 993635 . - . ID=exon-NYQ15_RS05295-1;Parent=rna-NYQ15_RS05295;anticodon=(pos:complement(993599..993601));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS05295;product=tRNA-Ser NZ_CP103431.1 RefSeq gene 993914 994126 . - . ID=gene-NYQ15_RS05300;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=NYQ15_RS05300 NZ_CP103431.1 Protein Homology CDS 993914 994126 . - 0 ID=cds-WP_005772326.1;Parent=gene-NYQ15_RS05300;Dbxref=GenBank:WP_005772326.1;Name=WP_005772326.1;Ontology_term=GO:0006109,GO:0006402,GO:0003723;gbkey=CDS;gene=csrA;go_function=RNA binding|0003723||IEA;go_process=regulation of carbohydrate metabolic process|0006109||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820051.1;locus_tag=NYQ15_RS05300;product=carbon storage regulator CsrA;protein_id=WP_005772326.1;transl_table=11 NZ_CP103431.1 RefSeq gene 994266 995495 . - . ID=gene-NYQ15_RS05305;Name=NYQ15_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05305 NZ_CP103431.1 Protein Homology CDS 994266 995495 . - 0 ID=cds-WP_005772318.1;Parent=gene-NYQ15_RS05305;Dbxref=GenBank:WP_005772318.1;Name=WP_005772318.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820052.1;locus_tag=NYQ15_RS05305;product=aspartate kinase;protein_id=WP_005772318.1;transl_table=11 NZ_CP103431.1 RefSeq gene 995501 998098 . - . ID=gene-NYQ15_RS05310;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=NYQ15_RS05310 NZ_CP103431.1 Protein Homology CDS 995501 998098 . - 0 ID=cds-WP_005768709.1;Parent=gene-NYQ15_RS05310;Dbxref=GenBank:WP_005768709.1;Name=WP_005768709.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820053.1;locus_tag=NYQ15_RS05310;product=alanine--tRNA ligase;protein_id=WP_005768709.1;transl_table=11 NZ_CP103431.1 RefSeq gene 998091 998525 . - . ID=gene-NYQ15_RS05315;Name=NYQ15_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05315 NZ_CP103431.1 Protein Homology CDS 998091 998525 . - 0 ID=cds-WP_005768711.1;Parent=gene-NYQ15_RS05315;Dbxref=GenBank:WP_005768711.1;Name=WP_005768711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820054.1;locus_tag=NYQ15_RS05315;product=regulatory protein RecX;protein_id=WP_005768711.1;transl_table=11 NZ_CP103431.1 RefSeq gene 998522 999553 . - . ID=gene-NYQ15_RS05320;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=NYQ15_RS05320 NZ_CP103431.1 Protein Homology CDS 998522 999553 . - 0 ID=cds-WP_005772330.1;Parent=gene-NYQ15_RS05320;Dbxref=GenBank:WP_005772330.1;Name=WP_005772330.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820055.1;locus_tag=NYQ15_RS05320;product=recombinase RecA;protein_id=WP_005772330.1;transl_table=11 NZ_CP103431.1 RefSeq gene 999641 1000141 . - . ID=gene-NYQ15_RS05325;Name=NYQ15_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05325 NZ_CP103431.1 Protein Homology CDS 999641 1000141 . - 0 ID=cds-WP_005768715.1;Parent=gene-NYQ15_RS05325;Dbxref=GenBank:WP_005768715.1;Name=WP_005768715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820056.1;locus_tag=NYQ15_RS05325;product=CinA family protein;protein_id=WP_005768715.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1000276 1002891 . + . ID=gene-NYQ15_RS05330;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=NYQ15_RS05330 NZ_CP103431.1 Protein Homology CDS 1000276 1002891 . + 0 ID=cds-WP_012570723.1;Parent=gene-NYQ15_RS05330;Dbxref=GenBank:WP_012570723.1;Name=WP_012570723.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820057.2;locus_tag=NYQ15_RS05330;product=DNA mismatch repair protein MutS;protein_id=WP_012570723.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1002888 1003631 . + . ID=gene-NYQ15_RS05335;Name=NYQ15_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05335 NZ_CP103431.1 Protein Homology CDS 1002888 1003631 . + 0 ID=cds-WP_005768719.1;Parent=gene-NYQ15_RS05335;Dbxref=GenBank:WP_005768719.1;Name=WP_005768719.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820058.1;locus_tag=NYQ15_RS05335;product=glycosyltransferase family 2 protein;protein_id=WP_005768719.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1003644 1004930 . + . ID=gene-NYQ15_RS05340;Name=NYQ15_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05340 NZ_CP103431.1 Protein Homology CDS 1003644 1004930 . + 0 ID=cds-WP_040933465.1;Parent=gene-NYQ15_RS05340;Dbxref=GenBank:WP_040933465.1;Name=WP_040933465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820059.1;locus_tag=NYQ15_RS05340;product=flavohemoglobin expression-modulating QEGLA motif protein;protein_id=WP_040933465.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1004901 1005635 . - . ID=gene-NYQ15_RS05345;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=NYQ15_RS05345 NZ_CP103431.1 Protein Homology CDS 1004901 1005635 . - 0 ID=cds-WP_259430858.1;Parent=gene-NYQ15_RS05345;Dbxref=GenBank:WP_259430858.1;Name=WP_259430858.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_338282.1;locus_tag=NYQ15_RS05345;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_259430858.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1005645 1006274 . - . ID=gene-NYQ15_RS05350;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=NYQ15_RS05350 NZ_CP103431.1 Protein Homology CDS 1005645 1006274 . - 0 ID=cds-WP_005768722.1;Parent=gene-NYQ15_RS05350;Dbxref=GenBank:WP_005768722.1;Name=WP_005768722.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820060.1;locus_tag=NYQ15_RS05350;product=SMC-Scp complex subunit ScpB;protein_id=WP_005768722.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1006279 1007106 . - . ID=gene-NYQ15_RS05355;Name=NYQ15_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05355 NZ_CP103431.1 Protein Homology CDS 1006279 1007106 . - 0 ID=cds-WP_012570721.1;Parent=gene-NYQ15_RS05355;Dbxref=GenBank:WP_012570721.1;Name=WP_012570721.1;Ontology_term=GO:0007059,GO:0051301;gbkey=CDS;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820061.2;locus_tag=NYQ15_RS05355;product=ScpA family protein;protein_id=WP_012570721.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1007157 1007478 . + . ID=gene-NYQ15_RS05360;Name=NYQ15_RS05360;end_range=1007478,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05360;partial=true NZ_CP103431.1 Protein Homology CDS 1007157 1007478 . + 0 ID=cds-WP_259430859.1;Parent=gene-NYQ15_RS05360;Dbxref=GenBank:WP_259430859.1;Name=WP_259430859.1;end_range=1007478,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332981.1;locus_tag=NYQ15_RS05360;partial=true;product=DUF1601 domain-containing protein;protein_id=WP_259430859.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1007968 1008263 . + . ID=gene-NYQ15_RS05365;Name=NYQ15_RS05365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS05365;partial=true;pseudo=true;start_range=.,1007968 NZ_CP103431.1 Protein Homology CDS 1007968 1008263 . + 2 ID=cds-NYQ15_RS05365;Parent=gene-NYQ15_RS05365;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332981.1;locus_tag=NYQ15_RS05365;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1007968;transl_table=11 NZ_CP103431.1 RefSeq gene 1008397 1009803 . + . ID=gene-NYQ15_RS05370;Name=NYQ15_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05370 NZ_CP103431.1 Protein Homology CDS 1008397 1009803 . + 0 ID=cds-WP_259430860.1;Parent=gene-NYQ15_RS05370;Dbxref=GenBank:WP_259430860.1;Name=WP_259430860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820063.1;locus_tag=NYQ15_RS05370;product=CBU_1063 family Dot/Icm T4SS effector;protein_id=WP_259430860.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1009809 1010093 . - . ID=gene-NYQ15_RS05375;Name=NYQ15_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05375 NZ_CP103431.1 Protein Homology CDS 1009809 1010093 . - 0 ID=cds-WP_005768280.1;Parent=gene-NYQ15_RS05375;Dbxref=GenBank:WP_005768280.1;Name=WP_005768280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820064.1;locus_tag=NYQ15_RS05375;product=hypothetical protein;protein_id=WP_005768280.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1010121 1010675 . - . ID=gene-NYQ15_RS05380;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=NYQ15_RS05380 NZ_CP103431.1 Protein Homology CDS 1010121 1010675 . - 0 ID=cds-WP_259430861.1;Parent=gene-NYQ15_RS05380;Dbxref=GenBank:WP_259430861.1;Name=WP_259430861.1;Ontology_term=GO:0008033,GO:0008664;gbkey=CDS;gene=thpR;go_function=RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820065.1;locus_tag=NYQ15_RS05380;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_259430861.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1010732 1012513 . + . ID=gene-NYQ15_RS05385;Name=NYQ15_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05385 NZ_CP103431.1 Protein Homology CDS 1010732 1012513 . + 0 ID=cds-WP_005772491.1;Parent=gene-NYQ15_RS05385;Dbxref=GenBank:WP_005772491.1;Name=WP_005772491.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820066.1;locus_tag=NYQ15_RS05385;product=SLC13 family permease;protein_id=WP_005772491.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1012510 1013316 . - . ID=gene-NYQ15_RS05390;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=NYQ15_RS05390 NZ_CP103431.1 Protein Homology CDS 1012510 1013316 . - 0 ID=cds-WP_259423856.1;Parent=gene-NYQ15_RS05390;Dbxref=GenBank:WP_259423856.1;Name=WP_259423856.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820067.1;locus_tag=NYQ15_RS05390;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_259423856.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1013346 1015089 . + . ID=gene-NYQ15_RS05395;Name=NYQ15_RS05395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS05395;pseudo=true NZ_CP103431.1 Protein Homology CDS 1013346 1015089 . + 0 ID=cds-NYQ15_RS05395;Parent=gene-NYQ15_RS05395;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332982.1;locus_tag=NYQ15_RS05395;product=7TM-DISM domain-containing protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1015089 1015328 . + . ID=gene-NYQ15_RS05400;Name=NYQ15_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05400 NZ_CP103431.1 GeneMarkS-2+ CDS 1015089 1015328 . + 0 ID=cds-WP_017252875.1;Parent=gene-NYQ15_RS05400;Dbxref=GenBank:WP_017252875.1;Name=WP_017252875.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS05400;product=hypothetical protein;protein_id=WP_017252875.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1015309 1017381 . + . ID=gene-NYQ15_RS05405;Name=NYQ15_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05405 NZ_CP103431.1 Protein Homology CDS 1015309 1017381 . + 0 ID=cds-WP_040070691.1;Parent=gene-NYQ15_RS05405;Dbxref=GenBank:WP_040070691.1;Name=WP_040070691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996947.1;locus_tag=NYQ15_RS05405;product=7TM diverse intracellular signaling domain-containing protein;protein_id=WP_040070691.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1017399 1017827 . - . ID=gene-NYQ15_RS05410;Name=NYQ15_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05410 NZ_CP103431.1 Protein Homology CDS 1017399 1017827 . - 0 ID=cds-WP_043902278.1;Parent=gene-NYQ15_RS05410;Dbxref=GenBank:WP_043902278.1;Name=WP_043902278.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820070.2;locus_tag=NYQ15_RS05410;product=DoxX family protein;protein_id=WP_043902278.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1017992 1019149 . + . ID=gene-NYQ15_RS05415;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=NYQ15_RS05415 NZ_CP103431.1 Protein Homology CDS 1017992 1019149 . + 0 ID=cds-WP_005768297.1;Parent=gene-NYQ15_RS05415;Dbxref=GenBank:WP_005768297.1;Name=WP_005768297.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820071.1;locus_tag=NYQ15_RS05415;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_005768297.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1019153 1019659 . + . ID=gene-NYQ15_RS05420;Name=NYQ15_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05420 NZ_CP103431.1 Protein Homology CDS 1019153 1019659 . + 0 ID=cds-WP_005768299.1;Parent=gene-NYQ15_RS05420;Dbxref=GenBank:WP_005768299.1;Name=WP_005768299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820072.1;locus_tag=NYQ15_RS05420;product=CsiV family protein;protein_id=WP_005768299.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1019681 1020241 . - . ID=gene-NYQ15_RS05425;Name=NYQ15_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05425 NZ_CP103431.1 Protein Homology CDS 1019681 1020241 . - 0 ID=cds-WP_005768301.1;Parent=gene-NYQ15_RS05425;Dbxref=GenBank:WP_005768301.1;Name=WP_005768301.1;Ontology_term=GO:0009116;gbkey=CDS;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820073.1;locus_tag=NYQ15_RS05425;product=hypoxanthine-guanine phosphoribosyltransferase;protein_id=WP_005768301.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1020228 1021379 . - . ID=gene-NYQ15_RS05430;Name=NYQ15_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05430 NZ_CP103431.1 Protein Homology CDS 1020228 1021379 . - 0 ID=cds-WP_005768303.1;Parent=gene-NYQ15_RS05430;Dbxref=GenBank:WP_005768303.1;Name=WP_005768303.1;Ontology_term=GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820074.1;locus_tag=NYQ15_RS05430;product=mechanosensitive ion channel family protein;protein_id=WP_005768303.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1023029 1023970 . - . ID=gene-NYQ15_RS05435;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=NYQ15_RS05435 NZ_CP103431.1 Protein Homology CDS 1023029 1023970 . - 0 ID=cds-WP_005768319.1;Parent=gene-NYQ15_RS05435;Dbxref=GenBank:WP_005768319.1;Name=WP_005768319.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820076.1;locus_tag=NYQ15_RS05435;product=beta-N-acetylhexosaminidase;protein_id=WP_005768319.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1023974 1024312 . - . ID=gene-NYQ15_RS05440;Name=NYQ15_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05440 NZ_CP103431.1 Protein Homology CDS 1023974 1024312 . - 0 ID=cds-WP_005768322.1;Parent=gene-NYQ15_RS05440;Dbxref=GenBank:WP_005768322.1;Name=WP_005768322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820077.1;locus_tag=NYQ15_RS05440;product=DUF1820 family protein;protein_id=WP_005768322.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1024320 1024916 . - . ID=gene-NYQ15_RS05445;Name=NYQ15_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05445 NZ_CP103431.1 Protein Homology CDS 1024320 1024916 . - 0 ID=cds-WP_005768324.1;Parent=gene-NYQ15_RS05445;Dbxref=GenBank:WP_005768324.1;Name=WP_005768324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820078.1;locus_tag=NYQ15_RS05445;product=CBU_1079 family Dot/Icm type IV secretion system effector;protein_id=WP_005768324.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1024994 1025476 . - . ID=gene-NYQ15_RS05450;Name=NYQ15_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05450 NZ_CP103431.1 Protein Homology CDS 1024994 1025476 . - 0 ID=cds-WP_005768327.1;Parent=gene-NYQ15_RS05450;Dbxref=GenBank:WP_005768327.1;Name=WP_005768327.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820079.1;locus_tag=NYQ15_RS05450;product=L%2CD-transpeptidase;protein_id=WP_005768327.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1025549 1025887 . - . ID=gene-NYQ15_RS05455;Name=NYQ15_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05455 NZ_CP103431.1 Protein Homology CDS 1025549 1025887 . - 0 ID=cds-WP_032074955.1;Parent=gene-NYQ15_RS05455;Dbxref=GenBank:WP_032074955.1;Name=WP_032074955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820080.2;locus_tag=NYQ15_RS05455;product=hypothetical protein;protein_id=WP_032074955.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1026071 1027006 . - . ID=gene-NYQ15_RS05460;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=NYQ15_RS05460 NZ_CP103431.1 Protein Homology CDS 1026071 1027006 . - 0 ID=cds-WP_005768333.1;Parent=gene-NYQ15_RS05460;Dbxref=GenBank:WP_005768333.1;Name=WP_005768333.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820081.1;locus_tag=NYQ15_RS05460;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_005768333.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1027009 1028736 . - . ID=gene-NYQ15_RS05465;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=NYQ15_RS05465 NZ_CP103431.1 Protein Homology CDS 1027009 1028736 . - 0 ID=cds-WP_098953240.1;Parent=gene-NYQ15_RS05465;Dbxref=GenBank:WP_098953240.1;Name=WP_098953240.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983;gbkey=CDS;gene=mutL;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820082.2;locus_tag=NYQ15_RS05465;product=DNA mismatch repair endonuclease MutL;protein_id=WP_098953240.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1028797 1030848 . - . ID=gene-NYQ15_RS05470;Name=NYQ15_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05470 NZ_CP103431.1 Protein Homology CDS 1028797 1030848 . - 0 ID=cds-WP_259430862.1;Parent=gene-NYQ15_RS05470;Dbxref=GenBank:WP_259430862.1;Name=WP_259430862.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820083.1;locus_tag=NYQ15_RS05470;product=PAS domain-containing hybrid sensor histidine kinase/response regulator;protein_id=WP_259430862.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1030886 1032103 . - . ID=gene-NYQ15_RS05475;Name=NYQ15_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05475 NZ_CP103431.1 Protein Homology CDS 1030886 1032103 . - 0 ID=cds-WP_012570744.1;Parent=gene-NYQ15_RS05475;Dbxref=GenBank:WP_012570744.1;Name=WP_012570744.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820084.2;locus_tag=NYQ15_RS05475;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_012570744.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1033102 1033227 . + . ID=gene-NYQ15_RS05480;Name=NYQ15_RS05480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS05480;partial=true;pseudo=true;start_range=.,1033102 NZ_CP103431.1 Protein Homology CDS 1033102 1033227 . + 0 ID=cds-NYQ15_RS05480;Parent=gene-NYQ15_RS05480;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819744.1;locus_tag=NYQ15_RS05480;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,1033102;transl_table=11 NZ_CP103431.1 RefSeq gene 1033270 1033716 . - . ID=gene-NYQ15_RS05485;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=NYQ15_RS05485 NZ_CP103431.1 Protein Homology CDS 1033270 1033716 . - 0 ID=cds-WP_005768344.1;Parent=gene-NYQ15_RS05485;Dbxref=GenBank:WP_005768344.1;Name=WP_005768344.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820086.1;locus_tag=NYQ15_RS05485;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_005768344.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1033730 1035196 . - . ID=gene-NYQ15_RS05490;Name=NYQ15_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05490 NZ_CP103431.1 Protein Homology CDS 1033730 1035196 . - 0 ID=cds-WP_259430863.1;Parent=gene-NYQ15_RS05490;Dbxref=GenBank:WP_259430863.1;Name=WP_259430863.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820087.1;locus_tag=NYQ15_RS05490;product=NAD(P)H-hydrate dehydratase;protein_id=WP_259430863.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1035232 1035330 . + . ID=gene-NYQ15_RS05495;Name=NYQ15_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05495 NZ_CP103431.1 Protein Homology CDS 1035232 1035330 . + 0 ID=cds-WP_010958001.1;Parent=gene-NYQ15_RS05495;Dbxref=GenBank:WP_010958001.1;Name=WP_010958001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820088.1;locus_tag=NYQ15_RS05495;product=hypothetical protein;protein_id=WP_010958001.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1036912 1039122 . - . ID=gene-NYQ15_RS05500;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=NYQ15_RS05500 NZ_CP103431.1 Protein Homology CDS 1036912 1039122 . - 0 ID=cds-WP_005772630.1;Parent=gene-NYQ15_RS05500;Dbxref=GenBank:WP_005772630.1;Name=WP_005772630.1;Ontology_term=GO:0003723,GO:0004518;gbkey=CDS;gene=rnr;go_function=RNA binding|0003723||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220501.1;locus_tag=NYQ15_RS05500;product=ribonuclease R;protein_id=WP_005772630.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1039203 1039433 . + . ID=gene-NYQ15_RS05505;Name=NYQ15_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05505 NZ_CP103431.1 Protein Homology CDS 1039203 1039433 . + 0 ID=cds-WP_005768349.1;Parent=gene-NYQ15_RS05505;Dbxref=GenBank:WP_005768349.1;Name=WP_005768349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820091.1;locus_tag=NYQ15_RS05505;product=hypothetical protein;protein_id=WP_005768349.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1039457 1042516 . - . ID=gene-NYQ15_RS05510;Name=NYQ15_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05510 NZ_CP103431.1 Protein Homology CDS 1039457 1042516 . - 0 ID=cds-WP_005772627.1;Parent=gene-NYQ15_RS05510;Dbxref=GenBank:WP_005772627.1;Name=WP_005772627.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820092.1;locus_tag=NYQ15_RS05510;product=efflux RND transporter permease subunit;protein_id=WP_005772627.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1042516 1043658 . - . ID=gene-NYQ15_RS05515;Name=NYQ15_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05515 NZ_CP103431.1 Protein Homology CDS 1042516 1043658 . - 0 ID=cds-WP_005772620.1;Parent=gene-NYQ15_RS05515;Dbxref=GenBank:WP_005772620.1;Name=WP_005772620.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820093.1;locus_tag=NYQ15_RS05515;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_005772620.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1043765 1043841 . + . ID=gene-NYQ15_RS05520;Name=NYQ15_RS05520;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS05520 NZ_CP103431.1 tRNAscan-SE tRNA 1043765 1043841 . + . ID=rna-NYQ15_RS05520;Parent=gene-NYQ15_RS05520;anticodon=(pos:1043799..1043801);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS05520;product=tRNA-Arg NZ_CP103431.1 tRNAscan-SE exon 1043765 1043841 . + . ID=exon-NYQ15_RS05520-1;Parent=rna-NYQ15_RS05520;anticodon=(pos:1043799..1043801);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS05520;product=tRNA-Arg NZ_CP103431.1 RefSeq gene 1043844 1044407 . + . ID=gene-NYQ15_RS05525;Name=NYQ15_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05525 NZ_CP103431.1 Protein Homology CDS 1043844 1044407 . + 0 ID=cds-WP_011996962.1;Parent=gene-NYQ15_RS05525;Dbxref=GenBank:WP_011996962.1;Name=WP_011996962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820094.2;locus_tag=NYQ15_RS05525;product=hypothetical protein;protein_id=WP_011996962.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1044411 1045790 . + . ID=gene-NYQ15_RS05530;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=NYQ15_RS05530 NZ_CP103431.1 Protein Homology CDS 1044411 1045790 . + 0 ID=cds-WP_259430864.1;Parent=gene-NYQ15_RS05530;Dbxref=GenBank:WP_259430864.1;Name=WP_259430864.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820095.2;locus_tag=NYQ15_RS05530;product=class II fumarate hydratase;protein_id=WP_259430864.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1045857 1046105 . + . ID=gene-NYQ15_RS05535;Name=NYQ15_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05535 NZ_CP103431.1 Protein Homology CDS 1045857 1046105 . + 0 ID=cds-WP_005772625.1;Parent=gene-NYQ15_RS05535;Dbxref=GenBank:WP_005772625.1;Name=WP_005772625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772625.1;locus_tag=NYQ15_RS05535;product=hypothetical protein;protein_id=WP_005772625.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1046102 1046899 . + . ID=gene-NYQ15_RS05540;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=NYQ15_RS05540 NZ_CP103431.1 Protein Homology CDS 1046102 1046899 . + 0 ID=cds-WP_032074963.1;Parent=gene-NYQ15_RS05540;Dbxref=GenBank:WP_032074963.1;Name=WP_032074963.1;Ontology_term=GO:0045151,GO:0047605;gbkey=CDS;gene=budA;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820096.1;locus_tag=NYQ15_RS05540;product=acetolactate decarboxylase;protein_id=WP_032074963.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1046913 1047737 . - . ID=gene-NYQ15_RS05545;Name=NYQ15_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05545 NZ_CP103431.1 Protein Homology CDS 1046913 1047737 . - 0 ID=cds-WP_011996964.1;Parent=gene-NYQ15_RS05545;Dbxref=GenBank:WP_011996964.1;Name=WP_011996964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820097.1;locus_tag=NYQ15_RS05545;product=DUF762 family protein;protein_id=WP_011996964.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1047872 1048651 . - . ID=gene-NYQ15_RS05550;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=NYQ15_RS05550 NZ_CP103431.1 Protein Homology CDS 1047872 1048651 . - 0 ID=cds-WP_005768366.1;Parent=gene-NYQ15_RS05550;Dbxref=GenBank:WP_005768366.1;Name=WP_005768366.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820098.1;locus_tag=NYQ15_RS05550;product=signal peptidase I;protein_id=WP_005768366.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1048661 1049089 . - . ID=gene-NYQ15_RS05555;Name=NYQ15_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05555 NZ_CP103431.1 Protein Homology CDS 1048661 1049089 . - 0 ID=cds-WP_010958010.1;Parent=gene-NYQ15_RS05555;Dbxref=GenBank:WP_010958010.1;Name=WP_010958010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820099.2;locus_tag=NYQ15_RS05555;product=hypothetical protein;protein_id=WP_010958010.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1049460 1050510 . + . ID=gene-NYQ15_RS05565;Name=NYQ15_RS05565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS05565;pseudo=true NZ_CP103431.1 Protein Homology CDS 1049460 1050510 . + 0 ID=cds-NYQ15_RS05565;Parent=gene-NYQ15_RS05565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768373.1;locus_tag=NYQ15_RS05565;product=CbuK_0972 family Dot/Icm T4SS effector;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1050507 1051787 . - . ID=gene-NYQ15_RS05570;Name=NYQ15_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05570 NZ_CP103431.1 Protein Homology CDS 1050507 1051787 . - 0 ID=cds-WP_039669370.1;Parent=gene-NYQ15_RS05570;Dbxref=GenBank:WP_039669370.1;Name=WP_039669370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820102.2;locus_tag=NYQ15_RS05570;product=transglycosylase SLT domain-containing protein;protein_id=WP_039669370.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1052849 1052958 . + . ID=gene-NYQ15_RS05575;Name=NYQ15_RS05575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS05575;partial=true;pseudo=true;start_range=.,1052849 NZ_CP103431.1 Protein Homology CDS 1052849 1052958 . + 2 ID=cds-NYQ15_RS05575;Parent=gene-NYQ15_RS05575;Note=too many ambiguous residues%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819744.1;locus_tag=NYQ15_RS05575;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,1052849;transl_table=11 NZ_CP103431.1 RefSeq gene 1053093 1054328 . + . ID=gene-NYQ15_RS05580;Name=NYQ15_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05580 NZ_CP103431.1 Protein Homology CDS 1053093 1054328 . + 0 ID=cds-WP_259430865.1;Parent=gene-NYQ15_RS05580;Dbxref=GenBank:WP_259430865.1;Name=WP_259430865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996970.1;locus_tag=NYQ15_RS05580;product=hypothetical protein;protein_id=WP_259430865.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1054436 1057591 . - . ID=gene-NYQ15_RS05585;Name=NYQ15_RS05585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS05585;pseudo=true NZ_CP103431.1 Protein Homology CDS 1054436 1057591 . - 0 ID=cds-NYQ15_RS05585;Parent=gene-NYQ15_RS05585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996972.1;locus_tag=NYQ15_RS05585;product=CBUD_1210 family Dot/Icm T4SS effector;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1057659 1058873 . - . ID=gene-NYQ15_RS05590;Name=NYQ15_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05590 NZ_CP103431.1 Protein Homology CDS 1057659 1058873 . - 0 ID=cds-WP_259430866.1;Parent=gene-NYQ15_RS05590;Dbxref=GenBank:WP_259430866.1;Name=WP_259430866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820110.2;locus_tag=NYQ15_RS05590;product=murein transglycosylase A;protein_id=WP_259430866.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1058858 1059208 . - . ID=gene-NYQ15_RS05595;Name=NYQ15_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05595 NZ_CP103431.1 Protein Homology CDS 1058858 1059208 . - 0 ID=cds-WP_259430867.1;Parent=gene-NYQ15_RS05595;Dbxref=GenBank:WP_259430867.1;Name=WP_259430867.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820111.2;locus_tag=NYQ15_RS05595;product=GIY-YIG nuclease family protein;protein_id=WP_259430867.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1059376 1060593 . - . ID=gene-NYQ15_RS05600;Name=NYQ15_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05600 NZ_CP103431.1 Protein Homology CDS 1059376 1060593 . - 0 ID=cds-WP_259430868.1;Parent=gene-NYQ15_RS05600;Dbxref=GenBank:WP_259430868.1;Name=WP_259430868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768391.1;locus_tag=NYQ15_RS05600;product=hypothetical protein;protein_id=WP_259430868.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1060705 1061022 . + . ID=gene-NYQ15_RS05605;Name=NYQ15_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05605 NZ_CP103431.1 Protein Homology CDS 1060705 1061022 . + 0 ID=cds-WP_010958015.1;Parent=gene-NYQ15_RS05605;Dbxref=GenBank:WP_010958015.1;Name=WP_010958015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820114.1;locus_tag=NYQ15_RS05605;product=hypothetical protein;protein_id=WP_010958015.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1061023 1062132 . - . ID=gene-NYQ15_RS05610;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=NYQ15_RS05610 NZ_CP103431.1 Protein Homology CDS 1061023 1062132 . - 0 ID=cds-WP_005768396.1;Parent=gene-NYQ15_RS05610;Dbxref=GenBank:WP_005768396.1;Name=WP_005768396.1;Ontology_term=GO:0042853,GO:0000286;gbkey=CDS;gene=ald;go_function=alanine dehydrogenase activity|0000286||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820115.1;locus_tag=NYQ15_RS05610;product=alanine dehydrogenase;protein_id=WP_005768396.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1062161 1063105 . - . ID=gene-NYQ15_RS05615;Name=NYQ15_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05615 NZ_CP103431.1 Protein Homology CDS 1062161 1063105 . - 0 ID=cds-WP_005768398.1;Parent=gene-NYQ15_RS05615;Dbxref=GenBank:WP_005768398.1;Name=WP_005768398.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820116.1;locus_tag=NYQ15_RS05615;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_005768398.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1063102 1063854 . - . ID=gene-NYQ15_RS05620;Name=NYQ15_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05620 NZ_CP103431.1 Protein Homology CDS 1063102 1063854 . - 0 ID=cds-WP_005768400.1;Parent=gene-NYQ15_RS05620;Dbxref=GenBank:WP_005768400.1;Name=WP_005768400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820117.1;locus_tag=NYQ15_RS05620;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_005768400.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1063851 1064672 . - . ID=gene-NYQ15_RS05625;Name=NYQ15_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05625 NZ_CP103431.1 Protein Homology CDS 1063851 1064672 . - 0 ID=cds-WP_012570746.1;Parent=gene-NYQ15_RS05625;Dbxref=GenBank:WP_012570746.1;Name=WP_012570746.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820118.2;locus_tag=NYQ15_RS05625;product=dienelactone hydrolase family protein;protein_id=WP_012570746.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1064695 1066320 . + . ID=gene-NYQ15_RS05630;Name=NYQ15_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05630 NZ_CP103431.1 Protein Homology CDS 1064695 1066320 . + 0 ID=cds-WP_005772694.1;Parent=gene-NYQ15_RS05630;Dbxref=GenBank:WP_005772694.1;Name=WP_005772694.1;Ontology_term=GO:0022900,GO:0004174,GO:0046872,GO:0051539;gbkey=CDS;go_function=electron-transferring-flavoprotein dehydrogenase activity|0004174||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820119.1;locus_tag=NYQ15_RS05630;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=WP_005772694.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1066315 1066497 . - . ID=gene-NYQ15_RS05635;Name=NYQ15_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05635 NZ_CP103431.1 Protein Homology CDS 1066315 1066497 . - 0 ID=cds-WP_259430869.1;Parent=gene-NYQ15_RS05635;Dbxref=GenBank:WP_259430869.1;Name=WP_259430869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820120.1;locus_tag=NYQ15_RS05635;product=hypothetical protein;protein_id=WP_259430869.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1066525 1067286 . + . ID=gene-NYQ15_RS05640;Name=NYQ15_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05640 NZ_CP103431.1 Protein Homology CDS 1066525 1067286 . + 0 ID=cds-WP_011996977.1;Parent=gene-NYQ15_RS05640;Dbxref=GenBank:WP_011996977.1;Name=WP_011996977.1;Ontology_term=GO:0018104,GO:0016746,GO:0071972;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820121.2;locus_tag=NYQ15_RS05640;product=L%2CD-transpeptidase;protein_id=WP_011996977.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1067522 1068463 . + . ID=gene-NYQ15_RS05645;Name=NYQ15_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05645 NZ_CP103431.1 Protein Homology CDS 1067522 1068463 . + 0 ID=cds-WP_005768408.1;Parent=gene-NYQ15_RS05645;Dbxref=GenBank:WP_005768408.1;Name=WP_005768408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768408.1;locus_tag=NYQ15_RS05645;product=DnaJ C-terminal domain-containing protein;protein_id=WP_005768408.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1068466 1068786 . + . ID=gene-NYQ15_RS05650;Name=NYQ15_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05650 NZ_CP103431.1 Protein Homology CDS 1068466 1068786 . + 0 ID=cds-WP_005768409.1;Parent=gene-NYQ15_RS05650;Dbxref=GenBank:WP_005768409.1;Name=WP_005768409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820123.1;locus_tag=NYQ15_RS05650;product=chaperone modulator CbpM;protein_id=WP_005768409.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1068790 1070094 . + . ID=gene-NYQ15_RS05655;Name=NYQ15_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05655 NZ_CP103431.1 Protein Homology CDS 1068790 1070094 . + 0 ID=cds-WP_259430870.1;Parent=gene-NYQ15_RS05655;Dbxref=GenBank:WP_259430870.1;Name=WP_259430870.1;Ontology_term=GO:0005975,GO:0004568,GO:0008061;gbkey=CDS;go_function=chitinase activity|0004568||IEA,chitin binding|0008061||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF012907.5;locus_tag=NYQ15_RS05655;product=glycoside hydrolase family 18 protein;protein_id=WP_259430870.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1070140 1070215 . - . ID=gene-NYQ15_RS05660;Name=NYQ15_RS05660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS05660;partial=true;pseudo=true;start_range=.,1070140 NZ_CP103431.1 Protein Homology CDS 1070140 1070215 . - 0 ID=cds-NYQ15_RS05660;Parent=gene-NYQ15_RS05660;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819398.1;locus_tag=NYQ15_RS05660;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1070140;transl_table=11 NZ_CP103431.1 RefSeq gene 1070382 1070897 . - . ID=gene-NYQ15_RS05665;Name=NYQ15_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05665 NZ_CP103431.1 Protein Homology CDS 1070382 1070897 . - 0 ID=cds-WP_080512920.1;Parent=gene-NYQ15_RS05665;Dbxref=GenBank:WP_080512920.1;Name=WP_080512920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820126.2;locus_tag=NYQ15_RS05665;product=HPP family protein;protein_id=WP_080512920.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1070897 1071256 . - . ID=gene-NYQ15_RS05670;Name=NYQ15_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05670 NZ_CP103431.1 Protein Homology CDS 1070897 1071256 . - 0 ID=cds-WP_005768410.1;Parent=gene-NYQ15_RS05670;Dbxref=GenBank:WP_005768410.1;Name=WP_005768410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820127.1;locus_tag=NYQ15_RS05670;product=iron-sulfur cluster assembly scaffold protein;protein_id=WP_005768410.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1071263 1072453 . - . ID=gene-NYQ15_RS05675;Name=NYQ15_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05675 NZ_CP103431.1 Protein Homology CDS 1071263 1072453 . - 0 ID=cds-WP_005768411.1;Parent=gene-NYQ15_RS05675;Dbxref=GenBank:WP_005768411.1;Name=WP_005768411.1;Ontology_term=GO:0044571,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=[2Fe-2S] cluster assembly|0044571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820128.1;locus_tag=NYQ15_RS05675;product=IscS subfamily cysteine desulfurase;protein_id=WP_005768411.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1072450 1074521 . - . ID=gene-NYQ15_RS05680;Name=NYQ15_RS05680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS05680;pseudo=true NZ_CP103431.1 Protein Homology CDS 1072450 1074521 . - 0 ID=cds-NYQ15_RS05680;Parent=gene-NYQ15_RS05680;Note=frameshifted;Ontology_term=GO:0006857,GO:0035673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oligopeptide transmembrane transporter activity|0035673||IEA;go_process=oligopeptide transport|0006857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820129.2;locus_tag=NYQ15_RS05680;product=OPT family oligopeptide transporter;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1074512 1075234 . - . ID=gene-NYQ15_RS05685;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=NYQ15_RS05685 NZ_CP103431.1 Protein Homology CDS 1074512 1075234 . - 0 ID=cds-WP_005768413.1;Parent=gene-NYQ15_RS05685;Dbxref=GenBank:WP_005768413.1;Name=WP_005768413.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820130.1;locus_tag=NYQ15_RS05685;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_005768413.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1075329 1075427 . + . ID=gene-NYQ15_RS05690;Name=NYQ15_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05690 NZ_CP103431.1 Protein Homology CDS 1075329 1075427 . + 0 ID=cds-WP_011996982.1;Parent=gene-NYQ15_RS05690;Dbxref=GenBank:WP_011996982.1;Name=WP_011996982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820131.1;locus_tag=NYQ15_RS05690;product=hypothetical protein;protein_id=WP_011996982.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1075424 1076228 . + . ID=gene-NYQ15_RS05695;Name=NYQ15_RS05695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS05695;pseudo=true NZ_CP103431.1 Protein Homology CDS 1075424 1076228 . + 0 ID=cds-NYQ15_RS05695;Parent=gene-NYQ15_RS05695;Note=frameshifted;Ontology_term=GO:0006020,GO:0046855,GO:0008934,GO:0046872;gbkey=CDS;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA,metal ion binding|0046872||IEA;go_process=inositol metabolic process|0006020||IEA,obsolete inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820132.2;locus_tag=NYQ15_RS05695;product=inositol monophosphatase family protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1076299 1076754 . - . ID=gene-NYQ15_RS05700;Name=NYQ15_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05700 NZ_CP103431.1 Protein Homology CDS 1076299 1076754 . - 0 ID=cds-WP_005768418.1;Parent=gene-NYQ15_RS05700;Dbxref=GenBank:WP_005768418.1;Name=WP_005768418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820133.1;locus_tag=NYQ15_RS05700;product=hypothetical protein;protein_id=WP_005768418.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1076805 1077239 . + . ID=gene-NYQ15_RS05705;Name=NYQ15_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05705 NZ_CP103431.1 Protein Homology CDS 1076805 1077239 . + 0 ID=cds-WP_005768420.1;Parent=gene-NYQ15_RS05705;Dbxref=GenBank:WP_005768420.1;Name=WP_005768420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820134.1;locus_tag=NYQ15_RS05705;product=hypothetical protein;protein_id=WP_005768420.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1077401 1080535 . - . ID=gene-NYQ15_RS05715;Name=NYQ15_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05715 NZ_CP103431.1 Protein Homology CDS 1077401 1080535 . - 0 ID=cds-WP_259430871.1;Parent=gene-NYQ15_RS05715;Dbxref=GenBank:WP_259430871.1;Name=WP_259430871.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820135.1;locus_tag=NYQ15_RS05715;product=tetratricopeptide repeat protein;protein_id=WP_259430871.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1080532 1081086 . - . ID=gene-NYQ15_RS05720;Name=NYQ15_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05720 NZ_CP103431.1 Protein Homology CDS 1080532 1081086 . - 0 ID=cds-WP_005768423.1;Parent=gene-NYQ15_RS05720;Dbxref=GenBank:WP_005768423.1;Name=WP_005768423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820136.1;locus_tag=NYQ15_RS05720;product=enhanced entry protein EnhB;protein_id=WP_005768423.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1081089 1081839 . - . ID=gene-NYQ15_RS05725;Name=NYQ15_RS05725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS05725;pseudo=true NZ_CP103431.1 Protein Homology CDS 1081089 1081839 . - 0 ID=cds-NYQ15_RS05725;Parent=gene-NYQ15_RS05725;Note=frameshifted;Ontology_term=GO:0018104,GO:0016746,GO:0071972;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820137.1;locus_tag=NYQ15_RS05725;product=L%2CD-transpeptidase;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1082122 1082274 . - . ID=gene-NYQ15_RS05730;Name=NYQ15_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05730 NZ_CP103431.1 Protein Homology CDS 1082122 1082274 . - 0 ID=cds-WP_005768427.1;Parent=gene-NYQ15_RS05730;Dbxref=GenBank:WP_005768427.1;Name=WP_005768427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332986.1;locus_tag=NYQ15_RS05730;product=hypothetical protein;protein_id=WP_005768427.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1082346 1082483 . - . ID=gene-NYQ15_RS05735;Name=NYQ15_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05735 NZ_CP103431.1 Protein Homology CDS 1082346 1082483 . - 0 ID=cds-WP_010958032.1;Parent=gene-NYQ15_RS05735;Dbxref=GenBank:WP_010958032.1;Name=WP_010958032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820138.2;locus_tag=NYQ15_RS05735;product=hypothetical protein;protein_id=WP_010958032.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1082742 1083854 . + . ID=gene-NYQ15_RS05740;Name=NYQ15_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05740 NZ_CP103431.1 Protein Homology CDS 1082742 1083854 . + 0 ID=cds-WP_259430872.1;Parent=gene-NYQ15_RS05740;Dbxref=GenBank:WP_259430872.1;Name=WP_259430872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996988.1;locus_tag=NYQ15_RS05740;product=hypothetical protein;protein_id=WP_259430872.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1083851 1084765 . - . ID=gene-NYQ15_RS05745;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=NYQ15_RS05745 NZ_CP103431.1 Protein Homology CDS 1083851 1084765 . - 0 ID=cds-WP_005772700.1;Parent=gene-NYQ15_RS05745;Dbxref=GenBank:WP_005772700.1;Name=WP_005772700.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820140.1;locus_tag=NYQ15_RS05745;product=protein translocase subunit SecF;protein_id=WP_005772700.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1084765 1086633 . - . ID=gene-NYQ15_RS05750;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=NYQ15_RS05750 NZ_CP103431.1 Protein Homology CDS 1084765 1086633 . - 0 ID=cds-WP_259430873.1;Parent=gene-NYQ15_RS05750;Dbxref=GenBank:WP_259430873.1;Name=WP_259430873.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820141.1;locus_tag=NYQ15_RS05750;product=protein translocase subunit SecD;protein_id=WP_259430873.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1086649 1086999 . - . ID=gene-NYQ15_RS05755;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=NYQ15_RS05755 NZ_CP103431.1 Protein Homology CDS 1086649 1086999 . - 0 ID=cds-WP_005768440.1;Parent=gene-NYQ15_RS05755;Dbxref=GenBank:WP_005768440.1;Name=WP_005768440.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820142.1;locus_tag=NYQ15_RS05755;product=preprotein translocase subunit YajC;protein_id=WP_005768440.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1087060 1087500 . - . ID=gene-NYQ15_RS05760;Name=NYQ15_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05760 NZ_CP103431.1 Protein Homology CDS 1087060 1087500 . - 0 ID=cds-WP_005768442.1;Parent=gene-NYQ15_RS05760;Dbxref=GenBank:WP_005768442.1;Name=WP_005768442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220529.1;locus_tag=NYQ15_RS05760;product=mannan-binding lectin;protein_id=WP_005768442.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1087728 1090700 . - . ID=gene-NYQ15_RS05770;Name=NYQ15_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05770 NZ_CP103431.1 Protein Homology CDS 1087728 1090700 . - 0 ID=cds-WP_259430874.1;Parent=gene-NYQ15_RS05770;Dbxref=GenBank:WP_259430874.1;Name=WP_259430874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996991.1;locus_tag=NYQ15_RS05770;product=type 2 lanthipeptide synthetase LanM family protein;protein_id=WP_259430874.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1091078 1092166 . + . ID=gene-NYQ15_RS05775;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=NYQ15_RS05775 NZ_CP103431.1 Protein Homology CDS 1091078 1092166 . + 0 ID=cds-WP_005768449.1;Parent=gene-NYQ15_RS05775;Dbxref=GenBank:WP_005768449.1;Name=WP_005768449.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_043880902.1;locus_tag=NYQ15_RS05775;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_005768449.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1092178 1095651 . + . ID=gene-NYQ15_RS05780;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=NYQ15_RS05780 NZ_CP103431.1 Protein Homology CDS 1092178 1095651 . + 0 ID=cds-WP_005772875.1;Parent=gene-NYQ15_RS05780;Dbxref=GenBank:WP_005772875.1;Name=WP_005772875.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820146.1;locus_tag=NYQ15_RS05780;product=transcription-repair coupling factor;protein_id=WP_005772875.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1095791 1096479 . + . ID=gene-NYQ15_RS05785;Name=NYQ15_RS05785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS05785;pseudo=true NZ_CP103431.1 Protein Homology CDS 1095791 1096479 . + 0 ID=cds-NYQ15_RS05785;Parent=gene-NYQ15_RS05785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220533.1;locus_tag=NYQ15_RS05785;product=COXBURSA331_A1300 family Dot/Icm T4SS effector;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1096498 1097235 . - . ID=gene-NYQ15_RS05790;Name=NYQ15_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05790 NZ_CP103431.1 Protein Homology CDS 1096498 1097235 . - 0 ID=cds-WP_040070737.1;Parent=gene-NYQ15_RS05790;Dbxref=GenBank:WP_040070737.1;Name=WP_040070737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820149.2;locus_tag=NYQ15_RS05790;product=HAD family hydrolase;protein_id=WP_040070737.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1097375 1098766 . + . ID=gene-NYQ15_RS05795;Name=NYQ15_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05795 NZ_CP103431.1 Protein Homology CDS 1097375 1098766 . + 0 ID=cds-WP_077019616.1;Parent=gene-NYQ15_RS05795;Dbxref=GenBank:WP_077019616.1;Name=WP_077019616.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820150.1;locus_tag=NYQ15_RS05795;product=anthranilate synthase component I family protein;protein_id=WP_077019616.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1098820 1099404 . + . ID=gene-NYQ15_RS05800;Name=NYQ15_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05800 NZ_CP103431.1 Protein Homology CDS 1098820 1099404 . + 0 ID=cds-WP_259431110.1;Parent=gene-NYQ15_RS05800;Dbxref=GenBank:WP_259431110.1;Name=WP_259431110.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00566.1;locus_tag=NYQ15_RS05800;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_259431110.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1099413 1100414 . + . ID=gene-NYQ15_RS05805;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=NYQ15_RS05805 NZ_CP103431.1 Protein Homology CDS 1099413 1100414 . + 0 ID=cds-WP_259430875.1;Parent=gene-NYQ15_RS05805;Dbxref=GenBank:WP_259430875.1;Name=WP_259430875.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: protein motif:HMM:TIGR01245.1;locus_tag=NYQ15_RS05805;product=anthranilate phosphoribosyltransferase;protein_id=WP_259430875.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1100407 1101180 . + . ID=gene-NYQ15_RS05810;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=NYQ15_RS05810 NZ_CP103431.1 Protein Homology CDS 1100407 1101180 . + 0 ID=cds-WP_005768465.1;Parent=gene-NYQ15_RS05810;Dbxref=GenBank:WP_005768465.1;Name=WP_005768465.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820151.1;locus_tag=NYQ15_RS05810;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_005768465.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1101173 1102975 . + . ID=gene-NYQ15_RS05815;Name=NYQ15_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05815 NZ_CP103431.1 Protein Homology CDS 1101173 1102975 . + 0 ID=cds-WP_259430876.1;Parent=gene-NYQ15_RS05815;Dbxref=GenBank:WP_259430876.1;Name=WP_259430876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820152.1;locus_tag=NYQ15_RS05815;product=bifunctional phosphoribosylanthranilate isomerase/tryptophan synthase subunit beta;protein_id=WP_259430876.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1102992 1103795 . + . ID=gene-NYQ15_RS05820;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=NYQ15_RS05820 NZ_CP103431.1 Protein Homology CDS 1102992 1103795 . + 0 ID=cds-WP_010958043.1;Parent=gene-NYQ15_RS05820;Dbxref=GenBank:WP_010958043.1;Name=WP_010958043.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820153.1;locus_tag=NYQ15_RS05820;product=tryptophan synthase subunit alpha;protein_id=WP_010958043.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1103792 1104493 . - . ID=gene-NYQ15_RS05825;Name=NYQ15_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05825 NZ_CP103431.1 Protein Homology CDS 1103792 1104493 . - 0 ID=cds-WP_005770660.1;Parent=gene-NYQ15_RS05825;Dbxref=GenBank:WP_005770660.1;Name=WP_005770660.1;Ontology_term=GO:0008360,GO:0071555,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=regulation of cell shape|0008360||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820154.1;locus_tag=NYQ15_RS05825;product=murein L%2CD-transpeptidase family protein;protein_id=WP_005770660.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1104618 1105985 . + . ID=gene-NYQ15_RS05830;Name=NYQ15_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05830 NZ_CP103431.1 Protein Homology CDS 1104618 1105985 . + 0 ID=cds-WP_010958044.1;Parent=gene-NYQ15_RS05830;Dbxref=GenBank:WP_010958044.1;Name=WP_010958044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820155.1;locus_tag=NYQ15_RS05830;product=7-dehydrocholesterol reductase;protein_id=WP_010958044.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1106002 1106139 . + . ID=gene-NYQ15_RS05835;Name=NYQ15_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05835 NZ_CP103431.1 Protein Homology CDS 1106002 1106139 . + 0 ID=cds-WP_010958045.1;Parent=gene-NYQ15_RS05835;Dbxref=GenBank:WP_010958045.1;Name=WP_010958045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820156.1;locus_tag=NYQ15_RS05835;product=hypothetical protein;protein_id=WP_010958045.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1106222 1107604 . + . ID=gene-NYQ15_RS05840;Name=NYQ15_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05840 NZ_CP103431.1 Protein Homology CDS 1106222 1107604 . + 0 ID=cds-WP_259411831.1;Parent=gene-NYQ15_RS05840;Dbxref=GenBank:WP_259411831.1;Name=WP_259411831.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF014673.5;locus_tag=NYQ15_RS05840;product=tetratricopeptide repeat protein;protein_id=WP_259411831.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1108103 1109434 . - . ID=gene-NYQ15_RS05850;Name=NYQ15_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05850 NZ_CP103431.1 Protein Homology CDS 1108103 1109434 . - 0 ID=cds-WP_005770666.1;Parent=gene-NYQ15_RS05850;Dbxref=GenBank:WP_005770666.1;Name=WP_005770666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820159.1;locus_tag=NYQ15_RS05850;product=MFS transporter;protein_id=WP_005770666.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1109575 1109919 . - . ID=gene-NYQ15_RS05855;Name=NYQ15_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05855 NZ_CP103431.1 GeneMarkS-2+ CDS 1109575 1109919 . - 0 ID=cds-WP_259411632.1;Parent=gene-NYQ15_RS05855;Dbxref=GenBank:WP_259411632.1;Name=WP_259411632.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS05855;product=hypothetical protein;protein_id=WP_259411632.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1109982 1111241 . - . ID=gene-NYQ15_RS05860;Name=NYQ15_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05860 NZ_CP103431.1 GeneMarkS-2+ CDS 1109982 1111241 . - 0 ID=cds-WP_259430877.1;Parent=gene-NYQ15_RS05860;Dbxref=GenBank:WP_259430877.1;Name=WP_259430877.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS05860;product=hypothetical protein;protein_id=WP_259430877.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1111427 1111503 . + . ID=gene-NYQ15_RS05865;Name=NYQ15_RS05865;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS05865 NZ_CP103431.1 tRNAscan-SE tRNA 1111427 1111503 . + . ID=rna-NYQ15_RS05865;Parent=gene-NYQ15_RS05865;anticodon=(pos:1111461..1111463);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS05865;product=tRNA-Arg NZ_CP103431.1 tRNAscan-SE exon 1111427 1111503 . + . ID=exon-NYQ15_RS05865-1;Parent=rna-NYQ15_RS05865;anticodon=(pos:1111461..1111463);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS05865;product=tRNA-Arg NZ_CP103431.1 RefSeq gene 1111602 1112225 . + . ID=gene-NYQ15_RS05870;Name=NYQ15_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05870 NZ_CP103431.1 Protein Homology CDS 1111602 1112225 . + 0 ID=cds-WP_242438588.1;Parent=gene-NYQ15_RS05870;Dbxref=GenBank:WP_242438588.1;Name=WP_242438588.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: protein motif:HMM:NF019334.5;locus_tag=NYQ15_RS05870;product=protein kinase domain-containing protein;protein_id=WP_242438588.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1112288 1112536 . + . ID=gene-NYQ15_RS05875;Name=NYQ15_RS05875;end_range=1112536,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS05875;partial=true;pseudo=true NZ_CP103431.1 Protein Homology CDS 1112288 1112536 . + 0 ID=cds-NYQ15_RS05875;Parent=gene-NYQ15_RS05875;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1112536,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012298.5;locus_tag=NYQ15_RS05875;partial=true;product=protein kinase;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1112549 1113154 . + . ID=gene-NYQ15_RS05880;Name=NYQ15_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05880 NZ_CP103431.1 GeneMarkS-2+ CDS 1112549 1113154 . + 0 ID=cds-WP_230454444.1;Parent=gene-NYQ15_RS05880;Dbxref=GenBank:WP_230454444.1;Name=WP_230454444.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS05880;product=hypothetical protein;protein_id=WP_230454444.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1113294 1113749 . + . ID=gene-NYQ15_RS05885;Name=NYQ15_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05885 NZ_CP103431.1 Protein Homology CDS 1113294 1113749 . + 0 ID=cds-WP_005770670.1;Parent=gene-NYQ15_RS05885;Dbxref=GenBank:WP_005770670.1;Name=WP_005770670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820166.1;locus_tag=NYQ15_RS05885;product=Hsp20/alpha crystallin family protein;protein_id=WP_005770670.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1113898 1114104 . + . ID=gene-NYQ15_RS05890;Name=NYQ15_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05890 NZ_CP103431.1 Protein Homology CDS 1113898 1114104 . + 0 ID=cds-WP_005770672.1;Parent=gene-NYQ15_RS05890;Dbxref=GenBank:WP_005770672.1;Name=WP_005770672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820167.1;locus_tag=NYQ15_RS05890;product=DUF378 domain-containing protein;protein_id=WP_005770672.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1114178 1114630 . - . ID=gene-NYQ15_RS05895;Name=NYQ15_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05895 NZ_CP103431.1 Protein Homology CDS 1114178 1114630 . - 0 ID=cds-WP_010958049.1;Parent=gene-NYQ15_RS05895;Dbxref=GenBank:WP_010958049.1;Name=WP_010958049.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820168.2;locus_tag=NYQ15_RS05895;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_010958049.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1114652 1116082 . - . ID=gene-NYQ15_RS05900;Name=NYQ15_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05900 NZ_CP103431.1 Protein Homology CDS 1114652 1116082 . - 0 ID=cds-WP_005770676.1;Parent=gene-NYQ15_RS05900;Dbxref=GenBank:WP_005770676.1;Name=WP_005770676.1;Ontology_term=GO:0006396,GO:0008452;gbkey=CDS;go_function=RNA ligase activity|0008452||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011947061.1;locus_tag=NYQ15_RS05900;product=RtcB family protein;protein_id=WP_005770676.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1116313 1116680 . + . ID=gene-NYQ15_RS05905;Name=NYQ15_RS05905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS05905;pseudo=true NZ_CP103431.1 Protein Homology CDS 1116313 1116680 . + 0 ID=cds-NYQ15_RS05905;Parent=gene-NYQ15_RS05905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820169.1;locus_tag=NYQ15_RS05905;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1116755 1117174 . - . ID=gene-NYQ15_RS05910;Name=NYQ15_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05910 NZ_CP103431.1 Protein Homology CDS 1116755 1117174 . - 0 ID=cds-WP_005770679.1;Parent=gene-NYQ15_RS05910;Dbxref=GenBank:WP_005770679.1;Name=WP_005770679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997005.1;locus_tag=NYQ15_RS05910;product=archease;protein_id=WP_005770679.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1117181 1117340 . - . ID=gene-NYQ15_RS05915;Name=NYQ15_RS05915;end_range=1117340,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS05915;partial=true;pseudo=true NZ_CP103431.1 Protein Homology CDS 1117181 1117340 . - 1 ID=cds-NYQ15_RS05915;Parent=gene-NYQ15_RS05915;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1117340,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820170.1;locus_tag=NYQ15_RS05915;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1117357 1118496 . - . ID=gene-NYQ15_RS05920;Name=NYQ15_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05920;partial=true;start_range=.,1117357 NZ_CP103431.1 Protein Homology CDS 1117357 1118496 . - 0 ID=cds-WP_259430878.1;Parent=gene-NYQ15_RS05920;Dbxref=GenBank:WP_259430878.1;Name=WP_259430878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820170.1;locus_tag=NYQ15_RS05920;partial=true;product=hypothetical protein;protein_id=WP_259430878.1;start_range=.,1117357;transl_table=11 NZ_CP103431.1 RefSeq gene 1118744 1120162 . + . ID=gene-NYQ15_RS05925;Name=NYQ15_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05925 NZ_CP103431.1 Protein Homology CDS 1118744 1120162 . + 0 ID=cds-WP_005770683.1;Parent=gene-NYQ15_RS05925;Dbxref=GenBank:WP_005770683.1;Name=WP_005770683.1;Ontology_term=GO:0006281,GO:0003677,GO:0003904,GO:0050660;gbkey=CDS;go_function=DNA binding|0003677||IEA,deoxyribodipyrimidine photo-lyase activity|0003904||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820171.1;locus_tag=NYQ15_RS05925;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_005770683.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1120761 1121893 . + . ID=gene-NYQ15_RS05930;Name=NYQ15_RS05930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS05930;pseudo=true NZ_CP103431.1 Protein Homology CDS 1120761 1121893 . + 0 ID=cds-NYQ15_RS05930;Parent=gene-NYQ15_RS05930;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820173.1;locus_tag=NYQ15_RS05930;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1121936 1123132 . + . ID=gene-NYQ15_RS05935;Name=NYQ15_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05935 NZ_CP103431.1 Protein Homology CDS 1121936 1123132 . + 0 ID=cds-WP_005770685.1;Parent=gene-NYQ15_RS05935;Dbxref=GenBank:WP_005770685.1;Name=WP_005770685.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820174.1;locus_tag=NYQ15_RS05935;product=multidrug effflux MFS transporter;protein_id=WP_005770685.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1123152 1123283 . - . ID=gene-NYQ15_RS05940;Name=NYQ15_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05940 NZ_CP103431.1 Protein Homology CDS 1123152 1123283 . - 0 ID=cds-WP_012570759.1;Parent=gene-NYQ15_RS05940;Dbxref=GenBank:WP_012570759.1;Name=WP_012570759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820175.1;locus_tag=NYQ15_RS05940;product=hypothetical protein;protein_id=WP_012570759.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1123322 1124500 . - . ID=gene-NYQ15_RS05945;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=NYQ15_RS05945 NZ_CP103431.1 Protein Homology CDS 1123322 1124500 . - 0 ID=cds-WP_005770687.1;Parent=gene-NYQ15_RS05945;Dbxref=GenBank:WP_005770687.1;Name=WP_005770687.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820176.1;locus_tag=NYQ15_RS05945;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_005770687.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1124501 1125643 . - . ID=gene-NYQ15_RS05950;Name=NYQ15_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05950 NZ_CP103431.1 Protein Homology CDS 1124501 1125643 . - 0 ID=cds-WP_005770689.1;Parent=gene-NYQ15_RS05950;Dbxref=GenBank:WP_005770689.1;Name=WP_005770689.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820177.1;locus_tag=NYQ15_RS05950;product=cysteine desulfurase family protein;protein_id=WP_005770689.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1125845 1126198 . + . ID=gene-NYQ15_RS05955;Name=NYQ15_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05955 NZ_CP103431.1 Protein Homology CDS 1125845 1126198 . + 0 ID=cds-WP_259430881.1;Parent=gene-NYQ15_RS05955;Dbxref=GenBank:WP_259430881.1;Name=WP_259430881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820178.2;locus_tag=NYQ15_RS05955;product=RNA-binding protein;protein_id=WP_259430881.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1126269 1126997 . - . ID=gene-NYQ15_RS05960;Name=NYQ15_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05960 NZ_CP103431.1 Protein Homology CDS 1126269 1126997 . - 0 ID=cds-WP_005770694.1;Parent=gene-NYQ15_RS05960;Dbxref=GenBank:WP_005770694.1;Name=WP_005770694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820179.1;locus_tag=NYQ15_RS05960;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=WP_005770694.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1127100 1128929 . - . ID=gene-NYQ15_RS05965;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=NYQ15_RS05965 NZ_CP103431.1 Protein Homology CDS 1127100 1128929 . - 0 ID=cds-WP_005770696.1;Parent=gene-NYQ15_RS05965;Dbxref=GenBank:WP_005770696.1;Name=WP_005770696.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820180.1;locus_tag=NYQ15_RS05965;product=excinuclease ABC subunit UvrC;protein_id=WP_005770696.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1128960 1129049 . - . ID=gene-NYQ15_RS05970;Name=NYQ15_RS05970;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS05970 NZ_CP103431.1 tRNAscan-SE tRNA 1128960 1129049 . - . ID=rna-NYQ15_RS05970;Parent=gene-NYQ15_RS05970;anticodon=(pos:complement(1129013..1129015));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS05970;product=tRNA-Ser NZ_CP103431.1 tRNAscan-SE exon 1128960 1129049 . - . ID=exon-NYQ15_RS05970-1;Parent=rna-NYQ15_RS05970;anticodon=(pos:complement(1129013..1129015));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS05970;product=tRNA-Ser NZ_CP103431.1 RefSeq gene 1131213 1131860 . + . ID=gene-NYQ15_RS05980;Name=NYQ15_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05980 NZ_CP103431.1 Protein Homology CDS 1131213 1131860 . + 0 ID=cds-WP_005770704.1;Parent=gene-NYQ15_RS05980;Dbxref=GenBank:WP_005770704.1;Name=WP_005770704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820182.1;locus_tag=NYQ15_RS05980;product=murein L%2CD-transpeptidase catalytic domain family protein;protein_id=WP_005770704.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1131857 1133128 . - . ID=gene-NYQ15_RS05985;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=NYQ15_RS05985 NZ_CP103431.1 Protein Homology CDS 1131857 1133128 . - 0 ID=cds-WP_005770706.1;Parent=gene-NYQ15_RS05985;Dbxref=GenBank:WP_005770706.1;Name=WP_005770706.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820183.1;locus_tag=NYQ15_RS05985;product=serine--tRNA ligase;protein_id=WP_005770706.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1133204 1134526 . - . ID=gene-NYQ15_RS05990;Name=NYQ15_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS05990 NZ_CP103431.1 Protein Homology CDS 1133204 1134526 . - 0 ID=cds-WP_005770708.1;Parent=gene-NYQ15_RS05990;Dbxref=GenBank:WP_005770708.1;Name=WP_005770708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820184.6;locus_tag=NYQ15_RS05990;product=replication-associated recombination protein A;protein_id=WP_005770708.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1134510 1135145 . - . ID=gene-NYQ15_RS05995;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=NYQ15_RS05995 NZ_CP103431.1 Protein Homology CDS 1134510 1135145 . - 0 ID=cds-WP_005772570.1;Parent=gene-NYQ15_RS05995;Dbxref=GenBank:WP_005772570.1;Name=WP_005772570.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820185.1;locus_tag=NYQ15_RS05995;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_005772570.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1135157 1137514 . - . ID=gene-NYQ15_RS06000;Name=NYQ15_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06000 NZ_CP103431.1 Protein Homology CDS 1135157 1137514 . - 0 ID=cds-WP_010958063.1;Parent=gene-NYQ15_RS06000;Dbxref=GenBank:WP_010958063.1;Name=WP_010958063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820186.2;locus_tag=NYQ15_RS06000;product=DNA translocase FtsK;protein_id=WP_010958063.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1137617 1138579 . + . ID=gene-NYQ15_RS06005;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=NYQ15_RS06005 NZ_CP103431.1 Protein Homology CDS 1137617 1138579 . + 0 ID=cds-WP_005770716.1;Parent=gene-NYQ15_RS06005;Dbxref=GenBank:WP_005770716.1;Name=WP_005770716.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820188.1;locus_tag=NYQ15_RS06005;product=thioredoxin-disulfide reductase;protein_id=WP_005770716.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1138605 1140041 . + . ID=gene-NYQ15_RS06010;Name=NYQ15_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06010 NZ_CP103431.1 Protein Homology CDS 1138605 1140041 . + 0 ID=cds-WP_032074991.1;Parent=gene-NYQ15_RS06010;Dbxref=GenBank:WP_032074991.1;Name=WP_032074991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820189.1;locus_tag=NYQ15_RS06010;product=hypothetical protein;protein_id=WP_032074991.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1140103 1140354 . + . ID=gene-NYQ15_RS06015;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=NYQ15_RS06015 NZ_CP103431.1 Protein Homology CDS 1140103 1140354 . + 0 ID=cds-WP_005772562.1;Parent=gene-NYQ15_RS06015;Dbxref=GenBank:WP_005772562.1;Name=WP_005772562.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820190.1;locus_tag=NYQ15_RS06015;product=translation initiation factor IF-1;protein_id=WP_005772562.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1140417 1142678 . - . ID=gene-NYQ15_RS06020;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=NYQ15_RS06020 NZ_CP103431.1 Protein Homology CDS 1140417 1142678 . - 0 ID=cds-WP_005772563.1;Parent=gene-NYQ15_RS06020;Dbxref=GenBank:WP_005772563.1;Name=WP_005772563.1;Ontology_term=GO:0006508,GO:0043335,GO:0004176,GO:0016887,GO:0009368;gbkey=CDS;gene=clpA;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820191.1;locus_tag=NYQ15_RS06020;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_005772563.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1142711 1142911 . + . ID=gene-NYQ15_RS06025;Name=NYQ15_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06025 NZ_CP103431.1 Protein Homology CDS 1142711 1142911 . + 0 ID=cds-WP_010958065.1;Parent=gene-NYQ15_RS06025;Dbxref=GenBank:WP_010958065.1;Name=WP_010958065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820192.1;locus_tag=NYQ15_RS06025;product=hypothetical protein;protein_id=WP_010958065.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1143001 1143537 . + . ID=gene-NYQ15_RS06030;Name=NYQ15_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06030 NZ_CP103431.1 Protein Homology CDS 1143001 1143537 . + 0 ID=cds-WP_012570762.1;Parent=gene-NYQ15_RS06030;Dbxref=GenBank:WP_012570762.1;Name=WP_012570762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820193.1;locus_tag=NYQ15_RS06030;product=CBU_1198 family Dot/Icm T4SS effector;protein_id=WP_012570762.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1143706 1144989 . - . ID=gene-NYQ15_RS06040;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=NYQ15_RS06040 NZ_CP103431.1 Protein Homology CDS 1143706 1144989 . - 0 ID=cds-WP_005772560.1;Parent=gene-NYQ15_RS06040;Dbxref=GenBank:WP_005772560.1;Name=WP_005772560.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820195.3;locus_tag=NYQ15_RS06040;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_005772560.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1145036 1146067 . - . ID=gene-NYQ15_RS06045;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=NYQ15_RS06045 NZ_CP103431.1 Protein Homology CDS 1145036 1146067 . - 0 ID=cds-WP_005770726.1;Parent=gene-NYQ15_RS06045;Dbxref=GenBank:WP_005770726.1;Name=WP_005770726.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820196.1;locus_tag=NYQ15_RS06045;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_005770726.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1146184 1147035 . + . ID=gene-NYQ15_RS06050;Name=NYQ15_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06050 NZ_CP103431.1 Protein Homology CDS 1146184 1147035 . + 0 ID=cds-WP_259411636.1;Parent=gene-NYQ15_RS06050;Dbxref=GenBank:WP_259411636.1;Name=WP_259411636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820197.1;locus_tag=NYQ15_RS06050;product=DUF6159 family protein;protein_id=WP_259411636.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1147099 1148751 . + . ID=gene-NYQ15_RS06055;Name=NYQ15_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06055 NZ_CP103431.1 Protein Homology CDS 1147099 1148751 . + 0 ID=cds-WP_005770730.1;Parent=gene-NYQ15_RS06055;Dbxref=GenBank:WP_005770730.1;Name=WP_005770730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820198.1;locus_tag=NYQ15_RS06055;product=FMN-binding glutamate synthase family protein;protein_id=WP_005770730.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1148755 1149428 . + . ID=gene-NYQ15_RS06060;Name=NYQ15_RS06060;end_range=1149428,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06060;partial=true NZ_CP103431.1 Protein Homology CDS 1148755 1149428 . + 0 ID=cds-WP_259430882.1;Parent=gene-NYQ15_RS06060;Dbxref=GenBank:WP_259430882.1;Name=WP_259430882.1;Ontology_term=GO:0016491;end_range=1149428,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820199.2;locus_tag=NYQ15_RS06060;partial=true;product=aldehyde dehydrogenase family protein;protein_id=WP_259430882.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1149471 1150131 . + . ID=gene-NYQ15_RS06065;Name=NYQ15_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06065;partial=true;start_range=.,1149471 NZ_CP103431.1 Protein Homology CDS 1149471 1150131 . + 1 ID=cds-WP_259430883.1;Parent=gene-NYQ15_RS06065;Dbxref=GenBank:WP_259430883.1;Name=WP_259430883.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820199.2;locus_tag=NYQ15_RS06065;partial=true;product=aldehyde dehydrogenase family protein;protein_id=WP_259430883.1;start_range=.,1149471;transl_table=11 NZ_CP103431.1 RefSeq gene 1150232 1151611 . - . ID=gene-NYQ15_RS06070;Name=NYQ15_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06070 NZ_CP103431.1 Protein Homology CDS 1150232 1151611 . - 0 ID=cds-WP_032074994.1;Parent=gene-NYQ15_RS06070;Dbxref=GenBank:WP_032074994.1;Name=WP_032074994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820201.2;locus_tag=NYQ15_RS06070;product=delta(24(24(1)))-sterol reductase;protein_id=WP_032074994.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1151629 1151781 . - . ID=gene-NYQ15_RS06075;Name=NYQ15_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06075 NZ_CP103431.1 Protein Homology CDS 1151629 1151781 . - 0 ID=cds-WP_010958073.1;Parent=gene-NYQ15_RS06075;Dbxref=GenBank:WP_010958073.1;Name=WP_010958073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820202.1;locus_tag=NYQ15_RS06075;product=hypothetical protein;protein_id=WP_010958073.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1152006 1153244 . + . ID=gene-NYQ15_RS06080;Name=NYQ15_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06080 NZ_CP103431.1 Protein Homology CDS 1152006 1153244 . + 0 ID=cds-WP_005770735.1;Parent=gene-NYQ15_RS06080;Dbxref=GenBank:WP_005770735.1;Name=WP_005770735.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820203.1;locus_tag=NYQ15_RS06080;product=MFS transporter;protein_id=WP_005770735.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1153257 1154798 . - . ID=gene-NYQ15_RS06085;Name=NYQ15_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06085 NZ_CP103431.1 Protein Homology CDS 1153257 1154798 . - 0 ID=cds-WP_005772558.1;Parent=gene-NYQ15_RS06085;Dbxref=GenBank:WP_005772558.1;Name=WP_005772558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820204.2;locus_tag=NYQ15_RS06085;product=hypothetical protein;protein_id=WP_005772558.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1162090 1162224 . - . ID=gene-NYQ15_RS06090;Name=NYQ15_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06090 NZ_CP103431.1 Protein Homology CDS 1162090 1162224 . - 0 ID=cds-WP_010958079.1;Parent=gene-NYQ15_RS06090;Dbxref=GenBank:WP_010958079.1;Name=WP_010958079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332990.1;locus_tag=NYQ15_RS06090;product=hypothetical protein;protein_id=WP_010958079.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1162554 1163993 . + . ID=gene-NYQ15_RS06095;Name=coxU2;gbkey=Gene;gene=coxU2;gene_biotype=protein_coding;locus_tag=NYQ15_RS06095 NZ_CP103431.1 Protein Homology CDS 1162554 1163993 . + 0 ID=cds-WP_012570768.1;Parent=gene-NYQ15_RS06095;Dbxref=GenBank:WP_012570768.1;Name=WP_012570768.1;gbkey=CDS;gene=coxU2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820212.1;locus_tag=NYQ15_RS06095;product=Dot/Icm T4SS effector CoxU2;protein_id=WP_012570768.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1164011 1164101 . - . ID=gene-NYQ15_RS06100;Name=NYQ15_RS06100;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS06100 NZ_CP103431.1 tRNAscan-SE tRNA 1164011 1164101 . - . ID=rna-NYQ15_RS06100;Parent=gene-NYQ15_RS06100;anticodon=(pos:complement(1164064..1164066));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS06100;product=tRNA-Ser NZ_CP103431.1 tRNAscan-SE exon 1164011 1164101 . - . ID=exon-NYQ15_RS06100-1;Parent=rna-NYQ15_RS06100;anticodon=(pos:complement(1164064..1164066));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS06100;product=tRNA-Ser NZ_CP103431.1 RefSeq gene 1165254 1165342 . + . ID=gene-NYQ15_RS06105;Name=NYQ15_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06105;partial=true;start_range=.,1165254 NZ_CP103431.1 Protein Homology CDS 1165254 1165342 . + 2 ID=cds-WP_259411833.1;Parent=gene-NYQ15_RS06105;Dbxref=GenBank:WP_259411833.1;Name=WP_259411833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819062.3;locus_tag=NYQ15_RS06105;partial=true;product=hypothetical protein;protein_id=WP_259411833.1;start_range=.,1165254;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1165696 1166815 . - . ID=gene-NYQ15_RS06125;Name=NYQ15_RS06125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS06125;pseudo=true NZ_CP103431.1 Protein Homology CDS 1165696 1166815 . - 0 ID=cds-NYQ15_RS06125;Parent=gene-NYQ15_RS06125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820214.1;locus_tag=NYQ15_RS06125;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1166816 1167538 . - . ID=gene-NYQ15_RS06130;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=NYQ15_RS06130 NZ_CP103431.1 Protein Homology CDS 1166816 1167538 . - 0 ID=cds-WP_005772557.1;Parent=gene-NYQ15_RS06130;Dbxref=GenBank:WP_005772557.1;Name=WP_005772557.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820215.1;locus_tag=NYQ15_RS06130;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_005772557.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1167538 1168131 . - . ID=gene-NYQ15_RS06135;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=NYQ15_RS06135 NZ_CP103431.1 Protein Homology CDS 1167538 1168131 . - 0 ID=cds-WP_098953242.1;Parent=gene-NYQ15_RS06135;Dbxref=GenBank:WP_098953242.1;Name=WP_098953242.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820216.1;locus_tag=NYQ15_RS06135;product=outer membrane protein assembly factor BamC;protein_id=WP_098953242.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1168148 1169017 . - . ID=gene-NYQ15_RS06140;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=NYQ15_RS06140 NZ_CP103431.1 Protein Homology CDS 1168148 1169017 . - 0 ID=cds-WP_005770744.1;Parent=gene-NYQ15_RS06140;Dbxref=GenBank:WP_005770744.1;Name=WP_005770744.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770744.1;locus_tag=NYQ15_RS06140;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_005770744.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1169254 1170183 . - . ID=gene-NYQ15_RS06150;Name=NYQ15_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06150 NZ_CP103431.1 Protein Homology CDS 1169254 1170183 . - 0 ID=cds-WP_005770748.1;Parent=gene-NYQ15_RS06150;Dbxref=GenBank:WP_005770748.1;Name=WP_005770748.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820218.1;locus_tag=NYQ15_RS06150;product=sugar kinase;protein_id=WP_005770748.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1170223 1171503 . + . ID=gene-NYQ15_RS06155;Name=NYQ15_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06155 NZ_CP103431.1 Protein Homology CDS 1170223 1171503 . + 0 ID=cds-WP_032075009.1;Parent=gene-NYQ15_RS06155;Dbxref=GenBank:WP_032075009.1;Name=WP_032075009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820219.2;locus_tag=NYQ15_RS06155;product=DNA recombination protein RmuC;protein_id=WP_032075009.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1171608 1171805 . - . ID=gene-NYQ15_RS06160;Name=NYQ15_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06160 NZ_CP103431.1 Protein Homology CDS 1171608 1171805 . - 0 ID=cds-WP_005770752.1;Parent=gene-NYQ15_RS06160;Dbxref=GenBank:WP_005770752.1;Name=WP_005770752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332992.1;locus_tag=NYQ15_RS06160;product=hypothetical protein;protein_id=WP_005770752.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1171917 1172825 . - . ID=gene-NYQ15_RS06165;Name=NYQ15_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06165 NZ_CP103431.1 Protein Homology CDS 1171917 1172825 . - 0 ID=cds-WP_010958087.1;Parent=gene-NYQ15_RS06165;Dbxref=GenBank:WP_010958087.1;Name=WP_010958087.1;Ontology_term=GO:0018786;gbkey=CDS;go_function=haloalkane dehalogenase activity|0018786||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820220.2;locus_tag=NYQ15_RS06165;product=haloalkane dehalogenase;protein_id=WP_010958087.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1172822 1177702 . - . ID=gene-NYQ15_RS06170;Name=NYQ15_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06170 NZ_CP103431.1 Protein Homology CDS 1172822 1177702 . - 0 ID=cds-WP_052437241.1;Parent=gene-NYQ15_RS06170;Dbxref=GenBank:WP_052437241.1;Name=WP_052437241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820221.2;locus_tag=NYQ15_RS06170;product=NAD-glutamate dehydrogenase;protein_id=WP_052437241.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1177917 1178588 . + . ID=gene-NYQ15_RS06175;Name=NYQ15_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06175 NZ_CP103431.1 Protein Homology CDS 1177917 1178588 . + 0 ID=cds-WP_005770758.1;Parent=gene-NYQ15_RS06175;Dbxref=GenBank:WP_005770758.1;Name=WP_005770758.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770758.1;locus_tag=NYQ15_RS06175;product=response regulator;protein_id=WP_005770758.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1178585 1180021 . + . ID=gene-NYQ15_RS06180;Name=NYQ15_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06180 NZ_CP103431.1 Protein Homology CDS 1178585 1180021 . + 0 ID=cds-WP_005770760.1;Parent=gene-NYQ15_RS06180;Dbxref=GenBank:WP_005770760.1;Name=WP_005770760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820223.1;locus_tag=NYQ15_RS06180;product=ATP-binding protein;protein_id=WP_005770760.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1180251 1182839 . + . ID=gene-NYQ15_RS06185;Name=NYQ15_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06185 NZ_CP103431.1 Protein Homology CDS 1180251 1182839 . + 0 ID=cds-WP_032075004.1;Parent=gene-NYQ15_RS06185;Dbxref=GenBank:WP_032075004.1;Name=WP_032075004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820224.1;locus_tag=NYQ15_RS06185;product=PD-(D/E)XK nuclease family protein;protein_id=WP_032075004.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1182836 1186168 . + . ID=gene-NYQ15_RS06190;Name=NYQ15_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06190 NZ_CP103431.1 Protein Homology CDS 1182836 1186168 . + 0 ID=cds-WP_039669410.1;Parent=gene-NYQ15_RS06190;Dbxref=GenBank:WP_039669410.1;Name=WP_039669410.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820225.1;locus_tag=NYQ15_RS06190;product=exodeoxyribonuclease V subunit beta;protein_id=WP_039669410.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1186314 1187012 . - . ID=gene-NYQ15_RS06195;Name=NYQ15_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06195 NZ_CP103431.1 Protein Homology CDS 1186314 1187012 . - 0 ID=cds-WP_259430885.1;Parent=gene-NYQ15_RS06195;Dbxref=GenBank:WP_259430885.1;Name=WP_259430885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820226.2;locus_tag=NYQ15_RS06195;product=hypothetical protein;protein_id=WP_259430885.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1187291 1188193 . + . ID=gene-NYQ15_RS06200;Name=NYQ15_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06200 NZ_CP103431.1 Protein Homology CDS 1187291 1188193 . + 0 ID=cds-WP_005770777.1;Parent=gene-NYQ15_RS06200;Dbxref=GenBank:WP_005770777.1;Name=WP_005770777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820228.2;locus_tag=NYQ15_RS06200;product=5'-nucleotidase;protein_id=WP_005770777.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1188257 1189543 . + . ID=gene-NYQ15_RS06205;Name=NYQ15_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06205 NZ_CP103431.1 Protein Homology CDS 1188257 1189543 . + 0 ID=cds-WP_080592777.1;Parent=gene-NYQ15_RS06205;Dbxref=GenBank:WP_080592777.1;Name=WP_080592777.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820229.2;locus_tag=NYQ15_RS06205;product=ATP-binding protein;protein_id=WP_080592777.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1189702 1190253 . + . ID=gene-NYQ15_RS06210;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=NYQ15_RS06210 NZ_CP103431.1 Protein Homology CDS 1189702 1190253 . + 0 ID=cds-WP_005770781.1;Parent=gene-NYQ15_RS06210;Dbxref=GenBank:WP_005770781.1;Name=WP_005770781.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820230.1;locus_tag=NYQ15_RS06210;product=oligoribonuclease;protein_id=WP_005770781.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1190430 1190522 . + . ID=gene-NYQ15_RS06215;Name=NYQ15_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06215 NZ_CP103431.1 Protein Homology CDS 1190430 1190522 . + 0 ID=cds-WP_010958095.1;Parent=gene-NYQ15_RS06215;Dbxref=GenBank:WP_010958095.1;Name=WP_010958095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820231.1;locus_tag=NYQ15_RS06215;product=hypothetical protein;protein_id=WP_010958095.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1190703 1191095 . - . ID=gene-NYQ15_RS06225;Name=NYQ15_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06225 NZ_CP103431.1 Protein Homology CDS 1190703 1191095 . - 0 ID=cds-WP_098953213.1;Parent=gene-NYQ15_RS06225;Dbxref=GenBank:WP_098953213.1;Name=WP_098953213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820232.2;locus_tag=NYQ15_RS06225;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_098953213.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1191098 1191352 . - . ID=gene-NYQ15_RS06230;Name=NYQ15_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06230 NZ_CP103431.1 Protein Homology CDS 1191098 1191352 . - 0 ID=cds-WP_005770787.1;Parent=gene-NYQ15_RS06230;Dbxref=GenBank:WP_005770787.1;Name=WP_005770787.1;Ontology_term=GO:0006276,GO:0006355,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_process=plasmid maintenance|0006276||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820233.1;locus_tag=NYQ15_RS06230;product=CopG family transcriptional regulator;protein_id=WP_005770787.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1191497 1192078 . + . ID=gene-NYQ15_RS06235;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=NYQ15_RS06235 NZ_CP103431.1 Protein Homology CDS 1191497 1192078 . + 0 ID=cds-WP_005770791.1;Parent=gene-NYQ15_RS06235;Dbxref=GenBank:WP_005770791.1;Name=WP_005770791.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820234.1;locus_tag=NYQ15_RS06235;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_005770791.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1192093 1192155 . - . ID=gene-NYQ15_RS06240;Name=NYQ15_RS06240;end_range=1192155,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS06240;partial=true;pseudo=true;start_range=.,1192093 NZ_CP103431.1 Protein Homology CDS 1192093 1192155 . - 0 ID=cds-NYQ15_RS06240;Parent=gene-NYQ15_RS06240;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1192155,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819535.1;locus_tag=NYQ15_RS06240;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1192093;transl_table=11 NZ_CP103431.1 RefSeq gene 1192154 1193173 . - . ID=gene-NYQ15_RS06245;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=NYQ15_RS06245 NZ_CP103431.1 Protein Homology CDS 1192154 1193173 . - 0 ID=cds-WP_005770793.1;Parent=gene-NYQ15_RS06245;Dbxref=GenBank:WP_005770793.1;Name=WP_005770793.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820235.1;locus_tag=NYQ15_RS06245;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_005770793.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1193182 1194168 . - . ID=gene-NYQ15_RS06250;Name=NYQ15_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06250 NZ_CP103431.1 Protein Homology CDS 1193182 1194168 . - 0 ID=cds-WP_005770796.1;Parent=gene-NYQ15_RS06250;Dbxref=GenBank:WP_005770796.1;Name=WP_005770796.1;Ontology_term=GO:0006108,GO:0016615;gbkey=CDS;go_function=malate dehydrogenase activity|0016615||IEA;go_process=malate metabolic process|0006108||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820236.1;locus_tag=NYQ15_RS06250;product=malate dehydrogenase;protein_id=WP_005770796.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1194363 1195588 . - . ID=gene-NYQ15_RS06255;Name=NYQ15_RS06255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS06255;pseudo=true NZ_CP103431.1 Protein Homology CDS 1194363 1195588 . - 0 ID=cds-NYQ15_RS06255;Parent=gene-NYQ15_RS06255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820237.1;locus_tag=NYQ15_RS06255;product=OmpP1/FadL family transporter;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1195722 1196966 . + . ID=gene-NYQ15_RS06260;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=NYQ15_RS06260 NZ_CP103431.1 Protein Homology CDS 1195722 1196966 . + 0 ID=cds-WP_005770799.1;Parent=gene-NYQ15_RS06260;Dbxref=GenBank:WP_005770799.1;Name=WP_005770799.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820238.1;locus_tag=NYQ15_RS06260;product=exodeoxyribonuclease VII large subunit;protein_id=WP_005770799.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1196963 1198498 . + . ID=gene-NYQ15_RS06265;Name=NYQ15_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06265 NZ_CP103431.1 Protein Homology CDS 1196963 1198498 . + 0 ID=cds-WP_005770801.1;Parent=gene-NYQ15_RS06265;Dbxref=GenBank:WP_005770801.1;Name=WP_005770801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820239.1;locus_tag=NYQ15_RS06265;product=MFS transporter;protein_id=WP_005770801.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1198637 1199968 . - . ID=gene-NYQ15_RS06270;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=NYQ15_RS06270 NZ_CP103431.1 Protein Homology CDS 1198637 1199968 . - 0 ID=cds-WP_259430886.1;Parent=gene-NYQ15_RS06270;Dbxref=GenBank:WP_259430886.1;Name=WP_259430886.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820240.1;locus_tag=NYQ15_RS06270;product=ribosome biogenesis GTPase Der;protein_id=WP_259430886.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1200206 1200826 . - . ID=gene-NYQ15_RS06275;Name=NYQ15_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06275 NZ_CP103431.1 Protein Homology CDS 1200206 1200826 . - 0 ID=cds-WP_005770804.1;Parent=gene-NYQ15_RS06275;Dbxref=GenBank:WP_005770804.1;Name=WP_005770804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820242.1;locus_tag=NYQ15_RS06275;product=tetratricopeptide repeat protein;protein_id=WP_005770804.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1200849 1202114 . - . ID=gene-NYQ15_RS06280;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=NYQ15_RS06280 NZ_CP103431.1 Protein Homology CDS 1200849 1202114 . - 0 ID=cds-WP_005770805.1;Parent=gene-NYQ15_RS06280;Dbxref=GenBank:WP_005770805.1;Name=WP_005770805.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820243.1;locus_tag=NYQ15_RS06280;product=histidine--tRNA ligase;protein_id=WP_005770805.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1202111 1202722 . - . ID=gene-NYQ15_RS06285;Name=NYQ15_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06285 NZ_CP103431.1 Protein Homology CDS 1202111 1202722 . - 0 ID=cds-WP_010958102.1;Parent=gene-NYQ15_RS06285;Dbxref=GenBank:WP_010958102.1;Name=WP_010958102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820244.1;locus_tag=NYQ15_RS06285;product=helix-turn-helix domain-containing protein;protein_id=WP_010958102.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1202859 1202999 . - . ID=gene-NYQ15_RS06290;Name=NYQ15_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06290 NZ_CP103431.1 Protein Homology CDS 1202859 1202999 . - 0 ID=cds-WP_011997041.1;Parent=gene-NYQ15_RS06290;Dbxref=GenBank:WP_011997041.1;Name=WP_011997041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820245.1;locus_tag=NYQ15_RS06290;product=hypothetical protein;protein_id=WP_011997041.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1202982 1203740 . + . ID=gene-NYQ15_RS06295;Name=NYQ15_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06295 NZ_CP103431.1 Protein Homology CDS 1202982 1203740 . + 0 ID=cds-WP_012570776.1;Parent=gene-NYQ15_RS06295;Dbxref=GenBank:WP_012570776.1;Name=WP_012570776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570776.1;locus_tag=NYQ15_RS06295;product=Fic family protein;protein_id=WP_012570776.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1203848 1204960 . - . ID=gene-NYQ15_RS06300;Name=NYQ15_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06300 NZ_CP103431.1 Protein Homology CDS 1203848 1204960 . - 0 ID=cds-WP_005770814.1;Parent=gene-NYQ15_RS06300;Dbxref=GenBank:WP_005770814.1;Name=WP_005770814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820246.1;locus_tag=NYQ15_RS06300;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_005770814.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1205180 1207375 . + . ID=gene-NYQ15_RS06305;Name=NYQ15_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06305 NZ_CP103431.1 Protein Homology CDS 1205180 1207375 . + 0 ID=cds-WP_230454431.1;Parent=gene-NYQ15_RS06305;Dbxref=GenBank:WP_230454431.1;Name=WP_230454431.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF024206.5;locus_tag=NYQ15_RS06305;product=ankyrin repeat domain-containing protein;protein_id=WP_230454431.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1207718 1208521 . - . ID=gene-NYQ15_RS06310;Name=NYQ15_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06310 NZ_CP103431.1 Protein Homology CDS 1207718 1208521 . - 0 ID=cds-WP_259430887.1;Parent=gene-NYQ15_RS06310;Dbxref=GenBank:WP_259430887.1;Name=WP_259430887.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820249.1;locus_tag=NYQ15_RS06310;product=polyprenyl synthetase family protein;protein_id=WP_259430887.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1208553 1208669 . + . ID=gene-NYQ15_RS06315;Name=NYQ15_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06315 NZ_CP103431.1 Protein Homology CDS 1208553 1208669 . + 0 ID=cds-WP_005770820.1;Parent=gene-NYQ15_RS06315;Dbxref=GenBank:WP_005770820.1;Name=WP_005770820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820250.1;locus_tag=NYQ15_RS06315;product=hypothetical protein;protein_id=WP_005770820.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1208662 1208809 . + . ID=gene-NYQ15_RS06320;Name=NYQ15_RS06320;end_range=1208809,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS06320;partial=true;pseudo=true NZ_CP103431.1 Protein Homology CDS 1208662 1208809 . + 0 ID=cds-NYQ15_RS06320;Parent=gene-NYQ15_RS06320;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1208809,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820251.1;locus_tag=NYQ15_RS06320;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1208868 1209072 . + . ID=gene-NYQ15_RS06325;Name=NYQ15_RS06325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS06325;partial=true;pseudo=true;start_range=.,1208868 NZ_CP103431.1 Protein Homology CDS 1208868 1209072 . + 1 ID=cds-NYQ15_RS06325;Parent=gene-NYQ15_RS06325;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820251.1;locus_tag=NYQ15_RS06325;partial=true;product=nuclear transport factor 2 family protein;pseudo=true;start_range=.,1208868;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1209058 1209493 . - . ID=gene-NYQ15_RS06330;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=pseudogene;locus_tag=NYQ15_RS06330;pseudo=true NZ_CP103431.1 Protein Homology CDS 1209058 1209493 . - 0 ID=cds-NYQ15_RS06330;Parent=gene-NYQ15_RS06330;Note=frameshifted;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820252.1;locus_tag=NYQ15_RS06330;product=nucleoside-diphosphate kinase;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1209629 1211227 . + . ID=gene-NYQ15_RS06335;Name=NYQ15_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06335 NZ_CP103431.1 Protein Homology CDS 1209629 1211227 . + 0 ID=cds-WP_005770826.1;Parent=gene-NYQ15_RS06335;Dbxref=GenBank:WP_005770826.1;Name=WP_005770826.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820253.1;locus_tag=NYQ15_RS06335;product=Na+/H+ antiporter;protein_id=WP_005770826.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1211666 1212412 . + . ID=gene-NYQ15_RS06340;Name=NYQ15_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06340 NZ_CP103431.1 Protein Homology CDS 1211666 1212412 . + 0 ID=cds-WP_011997045.1;Parent=gene-NYQ15_RS06340;Dbxref=GenBank:WP_011997045.1;Name=WP_011997045.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820254.1;locus_tag=NYQ15_RS06340;product=outer membrane protein;protein_id=WP_011997045.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1212510 1213766 . + . ID=gene-NYQ15_RS06345;Name=NYQ15_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06345 NZ_CP103431.1 Protein Homology CDS 1212510 1213766 . + 0 ID=cds-WP_010958109.1;Parent=gene-NYQ15_RS06345;Dbxref=GenBank:WP_010958109.1;Name=WP_010958109.1;Ontology_term=GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820255.1;locus_tag=NYQ15_RS06345;product=D-alanyl-D-alanine carboxypeptidase family protein;protein_id=WP_010958109.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1213763 1214026 . + . ID=gene-NYQ15_RS06350;Name=NYQ15_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06350 NZ_CP103431.1 Protein Homology CDS 1213763 1214026 . + 0 ID=cds-WP_005770832.1;Parent=gene-NYQ15_RS06350;Dbxref=GenBank:WP_005770832.1;Name=WP_005770832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820256.1;locus_tag=NYQ15_RS06350;product=YbeD family protein;protein_id=WP_005770832.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1214050 1214434 . + . ID=gene-NYQ15_RS06355;Name=NYQ15_RS06355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS06355;pseudo=true NZ_CP103431.1 Protein Homology CDS 1214050 1214434 . + 0 ID=cds-NYQ15_RS06355;Parent=gene-NYQ15_RS06355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820257.1;locus_tag=NYQ15_RS06355;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1214454 1214867 . + . ID=gene-NYQ15_RS06360;Name=NYQ15_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06360 NZ_CP103431.1 Protein Homology CDS 1214454 1214867 . + 0 ID=cds-WP_017252815.1;Parent=gene-NYQ15_RS06360;Dbxref=GenBank:WP_017252815.1;Name=WP_017252815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017252815.1;locus_tag=NYQ15_RS06360;product=hypothetical protein;protein_id=WP_017252815.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1215040 1215768 . + . ID=gene-NYQ15_RS06365;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=NYQ15_RS06365 NZ_CP103431.1 Protein Homology CDS 1215040 1215768 . + 0 ID=cds-WP_005772535.1;Parent=gene-NYQ15_RS06365;Dbxref=GenBank:WP_005772535.1;Name=WP_005772535.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820259.1;locus_tag=NYQ15_RS06365;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_005772535.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1215698 1216645 . + . ID=gene-NYQ15_RS06370;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=NYQ15_RS06370 NZ_CP103431.1 Protein Homology CDS 1215698 1216645 . + 0 ID=cds-WP_005770840.1;Parent=gene-NYQ15_RS06370;Dbxref=GenBank:WP_005770840.1;Name=WP_005770840.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820260.1;locus_tag=NYQ15_RS06370;product=lipoyl synthase;protein_id=WP_005770840.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1216756 1218804 . + . ID=gene-NYQ15_RS06375;Name=NYQ15_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06375 NZ_CP103431.1 Protein Homology CDS 1216756 1218804 . + 0 ID=cds-WP_259430888.1;Parent=gene-NYQ15_RS06375;Dbxref=GenBank:WP_259430888.1;Name=WP_259430888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820261.1;locus_tag=NYQ15_RS06375;product=LssY C-terminal domain-containing protein;protein_id=WP_259430888.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1218848 1218940 . + . ID=gene-NYQ15_RS06380;Name=NYQ15_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06380 NZ_CP103431.1 Protein Homology CDS 1218848 1218940 . + 0 ID=cds-WP_010958114.1;Parent=gene-NYQ15_RS06380;Dbxref=GenBank:WP_010958114.1;Name=WP_010958114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332993.1;locus_tag=NYQ15_RS06380;product=protein ScvA;protein_id=WP_010958114.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1218996 1220069 . - . ID=gene-NYQ15_RS06385;Name=NYQ15_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06385 NZ_CP103431.1 Protein Homology CDS 1218996 1220069 . - 0 ID=cds-WP_012570778.1;Parent=gene-NYQ15_RS06385;Dbxref=GenBank:WP_012570778.1;Name=WP_012570778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820262.2;locus_tag=NYQ15_RS06385;product=CBU_1268 family Dot/Icm T4SS effector;protein_id=WP_012570778.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1220076 1220567 . - . ID=gene-NYQ15_RS06390;Name=NYQ15_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06390 NZ_CP103431.1 Protein Homology CDS 1220076 1220567 . - 0 ID=cds-WP_005770846.1;Parent=gene-NYQ15_RS06390;Dbxref=GenBank:WP_005770846.1;Name=WP_005770846.1;Ontology_term=GO:0047617;gbkey=CDS;go_function=fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820263.1;locus_tag=NYQ15_RS06390;product=acyl-CoA thioesterase;protein_id=WP_005770846.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1223813 1223929 . - . ID=gene-NYQ15_RS06395;Name=NYQ15_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06395 NZ_CP103431.1 Protein Homology CDS 1223813 1223929 . - 0 ID=cds-WP_010958117.1;Parent=gene-NYQ15_RS06395;Dbxref=GenBank:WP_010958117.1;Name=WP_010958117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820265.1;locus_tag=NYQ15_RS06395;product=hypothetical protein;protein_id=WP_010958117.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1224202 1225464 . + . ID=gene-NYQ15_RS06400;Name=NYQ15_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06400 NZ_CP103431.1 Protein Homology CDS 1224202 1225464 . + 0 ID=cds-WP_005772530.1;Parent=gene-NYQ15_RS06400;Dbxref=GenBank:WP_005772530.1;Name=WP_005772530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820266.1;locus_tag=NYQ15_RS06400;product=6-phosphofructokinase;protein_id=WP_005772530.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1225466 1225948 . - . ID=gene-NYQ15_RS06405;Name=NYQ15_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06405 NZ_CP103431.1 Protein Homology CDS 1225466 1225948 . - 0 ID=cds-WP_259411641.1;Parent=gene-NYQ15_RS06405;Dbxref=GenBank:WP_259411641.1;Name=WP_259411641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820267.1;locus_tag=NYQ15_RS06405;product=protease inhibitor I42 family protein;protein_id=WP_259411641.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1225942 1227150 . - . ID=gene-NYQ15_RS06410;Name=manD;gbkey=Gene;gene=manD;gene_biotype=protein_coding;locus_tag=NYQ15_RS06410 NZ_CP103431.1 Protein Homology CDS 1225942 1227150 . - 0 ID=cds-WP_005770856.1;Parent=gene-NYQ15_RS06410;Dbxref=GenBank:WP_005770856.1;Name=WP_005770856.1;Ontology_term=GO:0016052,GO:0008927;gbkey=CDS;gene=manD;go_function=mannonate dehydratase activity|0008927||IEA;go_process=carbohydrate catabolic process|0016052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820268.1;locus_tag=NYQ15_RS06410;product=D-mannonate dehydratase ManD;protein_id=WP_005770856.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1227181 1227987 . - . ID=gene-NYQ15_RS06415;Name=NYQ15_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06415 NZ_CP103431.1 Protein Homology CDS 1227181 1227987 . - 0 ID=cds-WP_005772532.1;Parent=gene-NYQ15_RS06415;Dbxref=GenBank:WP_005772532.1;Name=WP_005772532.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820269.2;locus_tag=NYQ15_RS06415;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_005772532.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1228050 1228757 . + . ID=gene-NYQ15_RS06420;Name=eda;gbkey=Gene;gene=eda;gene_biotype=protein_coding;locus_tag=NYQ15_RS06420 NZ_CP103431.1 Protein Homology CDS 1228050 1228757 . + 0 ID=cds-WP_010958121.1;Parent=gene-NYQ15_RS06420;Dbxref=GenBank:WP_010958121.1;Name=WP_010958121.1;Ontology_term=GO:0009255,GO:0008675,GO:0008700;gbkey=CDS;gene=eda;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA,(R%2CS)-4-hydroxy-2-oxoglutarate aldolase activity|0008700||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820270.2;locus_tag=NYQ15_RS06420;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_010958121.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1228768 1229325 . + . ID=gene-NYQ15_RS06425;Name=NYQ15_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06425 NZ_CP103431.1 Protein Homology CDS 1228768 1229325 . + 0 ID=cds-WP_005770862.1;Parent=gene-NYQ15_RS06425;Dbxref=GenBank:WP_005770862.1;Name=WP_005770862.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820271.1;locus_tag=NYQ15_RS06425;product=thioredoxin family protein;protein_id=WP_005770862.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1229313 1229915 . + . ID=gene-NYQ15_RS06430;Name=NYQ15_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06430 NZ_CP103431.1 Protein Homology CDS 1229313 1229915 . + 0 ID=cds-WP_005772526.1;Parent=gene-NYQ15_RS06430;Dbxref=GenBank:WP_005772526.1;Name=WP_005772526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820272.1;locus_tag=NYQ15_RS06430;product=exopolysaccharide biosynthesis protein;protein_id=WP_005772526.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1230249 1230770 . - . ID=gene-NYQ15_RS06435;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=NYQ15_RS06435 NZ_CP103431.1 Protein Homology CDS 1230249 1230770 . - 0 ID=cds-WP_010958124.1;Parent=gene-NYQ15_RS06435;Dbxref=GenBank:WP_010958124.1;Name=WP_010958124.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820273.2;locus_tag=NYQ15_RS06435;product=transcription elongation factor GreA;protein_id=WP_010958124.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1230992 1231231 . + . ID=gene-NYQ15_RS06440;Name=NYQ15_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06440 NZ_CP103431.1 Protein Homology CDS 1230992 1231231 . + 0 ID=cds-WP_032075017.1;Parent=gene-NYQ15_RS06440;Dbxref=GenBank:WP_032075017.1;Name=WP_032075017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332996.1;locus_tag=NYQ15_RS06440;product=hypothetical protein;protein_id=WP_032075017.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1231281 1234502 . - . ID=gene-NYQ15_RS06445;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=NYQ15_RS06445 NZ_CP103431.1 Protein Homology CDS 1231281 1234502 . - 0 ID=cds-WP_005770868.1;Parent=gene-NYQ15_RS06445;Dbxref=GenBank:WP_005770868.1;Name=WP_005770868.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820274.1;locus_tag=NYQ15_RS06445;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_005770868.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1234584 1235792 . - . ID=gene-NYQ15_RS06450;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=NYQ15_RS06450 NZ_CP103431.1 Protein Homology CDS 1234584 1235792 . - 0 ID=cds-WP_098953204.1;Parent=gene-NYQ15_RS06450;Dbxref=GenBank:WP_098953204.1;Name=WP_098953204.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820275.2;locus_tag=NYQ15_RS06450;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_098953204.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1235909 1237465 . + . ID=gene-NYQ15_RS06455;Name=NYQ15_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06455 NZ_CP103431.1 Protein Homology CDS 1235909 1237465 . + 0 ID=cds-WP_005772538.1;Parent=gene-NYQ15_RS06455;Dbxref=GenBank:WP_005772538.1;Name=WP_005772538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772538.1;locus_tag=NYQ15_RS06455;product=MFS transporter;protein_id=WP_005772538.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1237571 1238881 . + . ID=gene-NYQ15_RS06460;Name=NYQ15_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06460 NZ_CP103431.1 Protein Homology CDS 1237571 1238881 . + 0 ID=cds-WP_005770872.1;Parent=gene-NYQ15_RS06460;Dbxref=GenBank:WP_005770872.1;Name=WP_005770872.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820276.1;locus_tag=NYQ15_RS06460;product=ATP-binding protein;protein_id=WP_005770872.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1238878 1240236 . + . ID=gene-NYQ15_RS06465;Name=NYQ15_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06465 NZ_CP103431.1 Protein Homology CDS 1238878 1240236 . + 0 ID=cds-WP_005770874.1;Parent=gene-NYQ15_RS06465;Dbxref=GenBank:WP_005770874.1;Name=WP_005770874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820277.1;locus_tag=NYQ15_RS06465;product=MFS transporter;protein_id=WP_005770874.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1240308 1241690 . + . ID=gene-NYQ15_RS06470;Name=NYQ15_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06470 NZ_CP103431.1 Protein Homology CDS 1240308 1241690 . + 0 ID=cds-WP_005772534.1;Parent=gene-NYQ15_RS06470;Dbxref=GenBank:WP_005772534.1;Name=WP_005772534.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820278.1;locus_tag=NYQ15_RS06470;product=ATP-binding protein;protein_id=WP_005772534.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1241734 1243509 . - . ID=gene-NYQ15_RS06475;Name=NYQ15_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06475 NZ_CP103431.1 Protein Homology CDS 1241734 1243509 . - 0 ID=cds-WP_098953202.1;Parent=gene-NYQ15_RS06475;Dbxref=GenBank:WP_098953202.1;Name=WP_098953202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772533.1;locus_tag=NYQ15_RS06475;product=hypothetical protein;protein_id=WP_098953202.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1243609 1244733 . - . ID=gene-NYQ15_RS06480;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=NYQ15_RS06480 NZ_CP103431.1 Protein Homology CDS 1243609 1244733 . - 0 ID=cds-WP_259411642.1;Parent=gene-NYQ15_RS06480;Dbxref=GenBank:WP_259411642.1;Name=WP_259411642.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820281.1;locus_tag=NYQ15_RS06480;product=molecular chaperone DnaJ;protein_id=WP_259411642.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1244876 1246846 . - . ID=gene-NYQ15_RS06485;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=NYQ15_RS06485 NZ_CP103431.1 Protein Homology CDS 1244876 1246846 . - 0 ID=cds-WP_005770882.1;Parent=gene-NYQ15_RS06485;Dbxref=GenBank:WP_005770882.1;Name=WP_005770882.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820282.1;locus_tag=NYQ15_RS06485;product=molecular chaperone DnaK;protein_id=WP_005770882.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1247012 1247605 . + . ID=gene-NYQ15_RS06490;Name=NYQ15_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06490 NZ_CP103431.1 Protein Homology CDS 1247012 1247605 . + 0 ID=cds-WP_005770884.1;Parent=gene-NYQ15_RS06490;Dbxref=GenBank:WP_005770884.1;Name=WP_005770884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820283.1;locus_tag=NYQ15_RS06490;product=biotin/lipoyl-containing protein;protein_id=WP_005770884.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1247608 1249005 . + . ID=gene-NYQ15_RS06495;Name=ankH;gbkey=Gene;gene=ankH;gene_biotype=protein_coding;locus_tag=NYQ15_RS06495 NZ_CP103431.1 Protein Homology CDS 1247608 1249005 . + 0 ID=cds-WP_259430897.1;Parent=gene-NYQ15_RS06495;Dbxref=GenBank:WP_259430897.1;Name=WP_259430897.1;Ontology_term=GO:0030255;gbkey=CDS;gene=ankH;go_process=protein secretion by the type IV secretion system|0030255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820284.1;locus_tag=NYQ15_RS06495;product=Dot/Icm T4SS effector AnkH/LegA3;protein_id=WP_259430897.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1249135 1249761 . - . ID=gene-NYQ15_RS06500;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=NYQ15_RS06500 NZ_CP103431.1 Protein Homology CDS 1249135 1249761 . - 0 ID=cds-WP_259430899.1;Parent=gene-NYQ15_RS06500;Dbxref=GenBank:WP_259430899.1;Name=WP_259430899.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820285.2;locus_tag=NYQ15_RS06500;product=nucleotide exchange factor GrpE;protein_id=WP_259430899.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1249816 1250193 . - . ID=gene-NYQ15_RS06505;Name=NYQ15_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06505 NZ_CP103431.1 Protein Homology CDS 1249816 1250193 . - 0 ID=cds-WP_005770889.1;Parent=gene-NYQ15_RS06505;Dbxref=GenBank:WP_005770889.1;Name=WP_005770889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820286.1;locus_tag=NYQ15_RS06505;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_005770889.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1250183 1250461 . - . ID=gene-NYQ15_RS06510;Name=NYQ15_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06510 NZ_CP103431.1 Protein Homology CDS 1250183 1250461 . - 0 ID=cds-WP_005770891.1;Parent=gene-NYQ15_RS06510;Dbxref=GenBank:WP_005770891.1;Name=WP_005770891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770891.1;locus_tag=NYQ15_RS06510;product=membrane protein;protein_id=WP_005770891.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1250522 1251421 . + . ID=gene-NYQ15_RS06515;Name=NYQ15_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06515 NZ_CP103431.1 Protein Homology CDS 1250522 1251421 . + 0 ID=cds-WP_005772537.1;Parent=gene-NYQ15_RS06515;Dbxref=GenBank:WP_005772537.1;Name=WP_005772537.1;Ontology_term=GO:0006741,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP biosynthetic process|0006741||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820288.1;locus_tag=NYQ15_RS06515;product=NAD(+) kinase;protein_id=WP_005772537.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1251426 1253096 . + . ID=gene-NYQ15_RS06520;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=NYQ15_RS06520 NZ_CP103431.1 Protein Homology CDS 1251426 1253096 . + 0 ID=cds-WP_005770895.1;Parent=gene-NYQ15_RS06520;Dbxref=GenBank:WP_005770895.1;Name=WP_005770895.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820289.1;locus_tag=NYQ15_RS06520;product=DNA repair protein RecN;protein_id=WP_005770895.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1253618 1254742 . - . ID=gene-NYQ15_RS06525;Name=NYQ15_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06525 NZ_CP103431.1 GeneMarkS-2+ CDS 1253618 1254742 . - 0 ID=cds-WP_143433542.1;Parent=gene-NYQ15_RS06525;Dbxref=GenBank:WP_143433542.1;Name=WP_143433542.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS06525;product=hypothetical protein;protein_id=WP_143433542.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1254867 1255088 . - . ID=gene-NYQ15_RS06530;Name=NYQ15_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06530 NZ_CP103431.1 GeneMarkS-2+ CDS 1254867 1255088 . - 0 ID=cds-WP_005770897.1;Parent=gene-NYQ15_RS06530;Dbxref=GenBank:WP_005770897.1;Name=WP_005770897.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS06530;product=hypothetical protein;protein_id=WP_005770897.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1255234 1255581 . - . ID=gene-NYQ15_RS06535;Name=NYQ15_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06535 NZ_CP103431.1 Protein Homology CDS 1255234 1255581 . - 0 ID=cds-WP_259430902.1;Parent=gene-NYQ15_RS06535;Dbxref=GenBank:WP_259430902.1;Name=WP_259430902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820292.1;locus_tag=NYQ15_RS06535;product=hypothetical protein;protein_id=WP_259430902.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1255622 1256059 . - . ID=gene-NYQ15_RS06540;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=NYQ15_RS06540 NZ_CP103431.1 Protein Homology CDS 1255622 1256059 . - 0 ID=cds-WP_005770899.1;Parent=gene-NYQ15_RS06540;Dbxref=GenBank:WP_005770899.1;Name=WP_005770899.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770899.1;locus_tag=NYQ15_RS06540;product=ferric iron uptake transcriptional regulator;protein_id=WP_005770899.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1256186 1256567 . + . ID=gene-NYQ15_RS06545;Name=NYQ15_RS06545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS06545;pseudo=true NZ_CP103431.1 Protein Homology CDS 1256186 1256567 . + 0 ID=cds-NYQ15_RS06545;Parent=gene-NYQ15_RS06545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820294.1;locus_tag=NYQ15_RS06545;product=outer membrane protein assembly factor BamE;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1256511 1256816 . - . ID=gene-NYQ15_RS06550;Name=NYQ15_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06550 NZ_CP103431.1 Protein Homology CDS 1256511 1256816 . - 0 ID=cds-WP_005773020.1;Parent=gene-NYQ15_RS06550;Dbxref=GenBank:WP_005773020.1;Name=WP_005773020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820295.1;locus_tag=NYQ15_RS06550;product=RnfH family protein;protein_id=WP_005773020.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1256813 1257253 . - . ID=gene-NYQ15_RS06555;Name=NYQ15_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06555 NZ_CP103431.1 Protein Homology CDS 1256813 1257253 . - 0 ID=cds-WP_005773021.1;Parent=gene-NYQ15_RS06555;Dbxref=GenBank:WP_005773021.1;Name=WP_005773021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820296.1;locus_tag=NYQ15_RS06555;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_005773021.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1257280 1257759 . + . ID=gene-NYQ15_RS06560;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=NYQ15_RS06560 NZ_CP103431.1 Protein Homology CDS 1257280 1257759 . + 0 ID=cds-WP_259411644.1;Parent=gene-NYQ15_RS06560;Dbxref=GenBank:WP_259411644.1;Name=WP_259411644.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820297.1;locus_tag=NYQ15_RS06560;product=SsrA-binding protein SmpB;protein_id=WP_259411644.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1257752 1258606 . + . ID=gene-NYQ15_RS06565;Name=NYQ15_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06565 NZ_CP103431.1 Protein Homology CDS 1257752 1258606 . + 0 ID=cds-WP_005770904.1;Parent=gene-NYQ15_RS06565;Dbxref=GenBank:WP_005770904.1;Name=WP_005770904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820298.1;locus_tag=NYQ15_RS06565;product=bifunctional methionine sulfoxide reductase B/A protein;protein_id=WP_005770904.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1258607 1259023 . - . ID=gene-NYQ15_RS06570;Name=NYQ15_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06570 NZ_CP103431.1 Protein Homology CDS 1258607 1259023 . - 0 ID=cds-WP_005770905.1;Parent=gene-NYQ15_RS06570;Dbxref=GenBank:WP_005770905.1;Name=WP_005770905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820299.2;locus_tag=NYQ15_RS06570;product=hypothetical protein;protein_id=WP_005770905.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1259386 1260018 . + . ID=gene-NYQ15_RS06575;Name=NYQ15_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06575 NZ_CP103431.1 Protein Homology CDS 1259386 1260018 . + 0 ID=cds-WP_012570788.1;Parent=gene-NYQ15_RS06575;Dbxref=GenBank:WP_012570788.1;Name=WP_012570788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570788.1;locus_tag=NYQ15_RS06575;product=HD domain-containing protein;protein_id=WP_012570788.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1260204 1260563 . + . ID=gene-NYQ15_RS06580;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=NYQ15_RS06580 NZ_CP103431.1 cmsearch tmRNA 1260204 1260563 . + . ID=rna-NYQ15_RS06580;Parent=gene-NYQ15_RS06580;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=NYQ15_RS06580;product=transfer-messenger RNA NZ_CP103431.1 cmsearch exon 1260204 1260563 . + . ID=exon-NYQ15_RS06580-1;Parent=rna-NYQ15_RS06580;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=NYQ15_RS06580;product=transfer-messenger RNA NZ_CP103431.1 RefSeq gene 1260892 1261623 . - . ID=gene-NYQ15_RS06585;Name=NYQ15_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06585 NZ_CP103431.1 Protein Homology CDS 1260892 1261623 . - 0 ID=cds-WP_080735193.1;Parent=gene-NYQ15_RS06585;Dbxref=GenBank:WP_080735193.1;Name=WP_080735193.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013530.5;locus_tag=NYQ15_RS06585;product=SDR family oxidoreductase;protein_id=WP_080735193.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1261694 1261798 . - . ID=gene-NYQ15_RS06590;Name=NYQ15_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06590 NZ_CP103431.1 Protein Homology CDS 1261694 1261798 . - 0 ID=cds-WP_010958141.1;Parent=gene-NYQ15_RS06590;Dbxref=GenBank:WP_010958141.1;Name=WP_010958141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820301.1;locus_tag=NYQ15_RS06590;product=hypothetical protein;protein_id=WP_010958141.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1261825 1262274 . - . ID=gene-NYQ15_RS06595;Name=NYQ15_RS06595;end_range=1262274,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS06595;partial=true;pseudo=true NZ_CP103431.1 Protein Homology CDS 1261825 1262274 . - 0 ID=cds-NYQ15_RS06595;Parent=gene-NYQ15_RS06595;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1262274,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820302.1;locus_tag=NYQ15_RS06595;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1265238 1265732 . - . ID=gene-NYQ15_RS06600;Name=coxCC6;gbkey=Gene;gene=coxCC6;gene_biotype=protein_coding;locus_tag=NYQ15_RS06600;partial=true;start_range=.,1265238 NZ_CP103431.1 Protein Homology CDS 1265238 1265732 . - 0 ID=cds-WP_259430904.1;Parent=gene-NYQ15_RS06600;Dbxref=GenBank:WP_259430904.1;Name=WP_259430904.1;gbkey=CDS;gene=coxCC6;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820305.2;locus_tag=NYQ15_RS06600;partial=true;product=Dot/Icm T4SS effector CoxCC6;protein_id=WP_259430904.1;start_range=.,1265238;transl_table=11 NZ_CP103431.1 RefSeq gene 1266049 1266360 . - . ID=gene-NYQ15_RS06605;Name=NYQ15_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06605 NZ_CP103431.1 Protein Homology CDS 1266049 1266360 . - 0 ID=cds-WP_077019588.1;Parent=gene-NYQ15_RS06605;Dbxref=GenBank:WP_077019588.1;Name=WP_077019588.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024591.5;locus_tag=NYQ15_RS06605;product=AMP-binding enzyme;protein_id=WP_077019588.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1266425 1266652 . - . ID=gene-NYQ15_RS06610;Name=NYQ15_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06610 NZ_CP103431.1 Protein Homology CDS 1266425 1266652 . - 0 ID=cds-WP_010958145.1;Parent=gene-NYQ15_RS06610;Dbxref=GenBank:WP_010958145.1;Name=WP_010958145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820306.1;locus_tag=NYQ15_RS06610;product=phage integrase N-terminal domain-containing protein;protein_id=WP_010958145.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1266676 1266783 . + . ID=gene-NYQ15_RS06615;Name=NYQ15_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06615 NZ_CP103431.1 Protein Homology CDS 1266676 1266783 . + 0 ID=cds-WP_010958146.1;Parent=gene-NYQ15_RS06615;Dbxref=GenBank:WP_010958146.1;Name=WP_010958146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332997.1;locus_tag=NYQ15_RS06615;product=hypothetical protein;protein_id=WP_010958146.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1266807 1266935 . - . ID=gene-NYQ15_RS06620;Name=NYQ15_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06620 NZ_CP103431.1 Protein Homology CDS 1266807 1266935 . - 0 ID=cds-WP_005772934.1;Parent=gene-NYQ15_RS06620;Dbxref=GenBank:WP_005772934.1;Name=WP_005772934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820307.1;locus_tag=NYQ15_RS06620;product=hypothetical protein;protein_id=WP_005772934.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1267206 1267919 . - . ID=gene-NYQ15_RS06625;Name=NYQ15_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06625 NZ_CP103431.1 Protein Homology CDS 1267206 1267919 . - 0 ID=cds-WP_005770924.1;Parent=gene-NYQ15_RS06625;Dbxref=GenBank:WP_005770924.1;Name=WP_005770924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770924.1;locus_tag=NYQ15_RS06625;product=hypothetical protein;protein_id=WP_005770924.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1267961 1268034 . - . ID=gene-NYQ15_RS06630;Name=NYQ15_RS06630;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS06630 NZ_CP103431.1 tRNAscan-SE tRNA 1267961 1268034 . - . ID=rna-NYQ15_RS06630;Parent=gene-NYQ15_RS06630;anticodon=(pos:complement(1267998..1268000));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS06630;product=tRNA-Pro NZ_CP103431.1 tRNAscan-SE exon 1267961 1268034 . - . ID=exon-NYQ15_RS06630-1;Parent=rna-NYQ15_RS06630;anticodon=(pos:complement(1267998..1268000));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS06630;product=tRNA-Pro NZ_CP103431.1 RefSeq gene 1268111 1268446 . - . ID=gene-NYQ15_RS06635;Name=NYQ15_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06635 NZ_CP103431.1 Protein Homology CDS 1268111 1268446 . - 0 ID=cds-WP_010958148.1;Parent=gene-NYQ15_RS06635;Dbxref=GenBank:WP_010958148.1;Name=WP_010958148.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820309.2;locus_tag=NYQ15_RS06635;product=MerR family transcriptional regulator;protein_id=WP_010958148.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1268460 1268771 . - . ID=gene-NYQ15_RS06640;Name=NYQ15_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06640 NZ_CP103431.1 Protein Homology CDS 1268460 1268771 . - 0 ID=cds-WP_005770927.1;Parent=gene-NYQ15_RS06640;Dbxref=GenBank:WP_005770927.1;Name=WP_005770927.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820310.1;locus_tag=NYQ15_RS06640;product=integration host factor subunit alpha;protein_id=WP_005770927.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1268776 1271154 . - . ID=gene-NYQ15_RS06645;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=NYQ15_RS06645 NZ_CP103431.1 Protein Homology CDS 1268776 1271154 . - 0 ID=cds-WP_005772935.1;Parent=gene-NYQ15_RS06645;Dbxref=GenBank:WP_005772935.1;Name=WP_005772935.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820311.1;locus_tag=NYQ15_RS06645;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_005772935.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1271151 1272140 . - . ID=gene-NYQ15_RS06650;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=NYQ15_RS06650 NZ_CP103431.1 Protein Homology CDS 1271151 1272140 . - 0 ID=cds-WP_005770930.1;Parent=gene-NYQ15_RS06650;Dbxref=GenBank:WP_005770930.1;Name=WP_005770930.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770930.1;locus_tag=NYQ15_RS06650;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_005770930.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1272217 1272576 . - . ID=gene-NYQ15_RS06655;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=NYQ15_RS06655 NZ_CP103431.1 Protein Homology CDS 1272217 1272576 . - 0 ID=cds-WP_005770935.1;Parent=gene-NYQ15_RS06655;Dbxref=GenBank:WP_005770935.1;Name=WP_005770935.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820313.1;locus_tag=NYQ15_RS06655;product=50S ribosomal protein L20;protein_id=WP_005770935.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1273216 1273410 . - . ID=gene-NYQ15_RS06665;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=NYQ15_RS06665 NZ_CP103431.1 Protein Homology CDS 1273216 1273410 . - 0 ID=cds-WP_005770936.1;Parent=gene-NYQ15_RS06665;Dbxref=GenBank:WP_005770936.1;Name=WP_005770936.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820314.1;locus_tag=NYQ15_RS06665;product=50S ribosomal protein L35;protein_id=WP_005770936.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1273391 1273948 . - . ID=gene-NYQ15_RS06670;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=NYQ15_RS06670 NZ_CP103431.1 Protein Homology CDS 1273391 1273948 . - 0 ID=cds-WP_061299200.1;Parent=gene-NYQ15_RS06670;Dbxref=GenBank:WP_061299200.1;Name=WP_061299200.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660568.1;locus_tag=NYQ15_RS06670;product=translation initiation factor IF-3;protein_id=WP_061299200.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1273983 1275938 . - . ID=gene-NYQ15_RS06675;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=NYQ15_RS06675 NZ_CP103431.1 Protein Homology CDS 1273983 1275938 . - 0 ID=cds-WP_032075031.1;Parent=gene-NYQ15_RS06675;Dbxref=GenBank:WP_032075031.1;Name=WP_032075031.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_040948163.1;locus_tag=NYQ15_RS06675;product=threonine--tRNA ligase;protein_id=WP_032075031.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1276047 1276328 . + . ID=gene-NYQ15_RS06680;Name=NYQ15_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06680 NZ_CP103431.1 Protein Homology CDS 1276047 1276328 . + 0 ID=cds-WP_259411836.1;Parent=gene-NYQ15_RS06680;Dbxref=GenBank:WP_259411836.1;Name=WP_259411836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570791.1;locus_tag=NYQ15_RS06680;product=DUF6506 family protein;protein_id=WP_259411836.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1276335 1277405 . - . ID=gene-NYQ15_RS06685;Name=NYQ15_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06685 NZ_CP103431.1 Protein Homology CDS 1276335 1277405 . - 0 ID=cds-WP_259411646.1;Parent=gene-NYQ15_RS06685;Dbxref=GenBank:WP_259411646.1;Name=WP_259411646.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820319.1;locus_tag=NYQ15_RS06685;product=PA0069 family radical SAM protein;protein_id=WP_259411646.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1277429 1278190 . - . ID=gene-NYQ15_RS06690;Name=NYQ15_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06690 NZ_CP103431.1 Protein Homology CDS 1277429 1278190 . - 0 ID=cds-WP_005772956.1;Parent=gene-NYQ15_RS06690;Dbxref=GenBank:WP_005772956.1;Name=WP_005772956.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013739.5;locus_tag=NYQ15_RS06690;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_005772956.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1278210 1278740 . - . ID=gene-NYQ15_RS06695;Name=NYQ15_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06695 NZ_CP103431.1 Protein Homology CDS 1278210 1278740 . - 0 ID=cds-WP_230454455.1;Parent=gene-NYQ15_RS06695;Dbxref=GenBank:WP_230454455.1;Name=WP_230454455.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013739.5;locus_tag=NYQ15_RS06695;product=FAD-dependent oxidoreductase;protein_id=WP_230454455.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1278940 1279356 . + . ID=gene-NYQ15_RS06700;Name=NYQ15_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06700 NZ_CP103431.1 Protein Homology CDS 1278940 1279356 . + 0 ID=cds-WP_172435530.1;Parent=gene-NYQ15_RS06700;Dbxref=GenBank:WP_172435530.1;Name=WP_172435530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770949.1;locus_tag=NYQ15_RS06700;product=CBS domain-containing protein;protein_id=WP_172435530.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1279420 1279527 . + . ID=gene-NYQ15_RS06705;Name=NYQ15_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06705 NZ_CP103431.1 Protein Homology CDS 1279420 1279527 . + 0 ID=cds-WP_010958156.1;Parent=gene-NYQ15_RS06705;Dbxref=GenBank:WP_010958156.1;Name=WP_010958156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332999.1;locus_tag=NYQ15_RS06705;product=hypothetical protein;protein_id=WP_010958156.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1279509 1280300 . + . ID=gene-NYQ15_RS06710;Name=NYQ15_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06710 NZ_CP103431.1 Protein Homology CDS 1279509 1280300 . + 0 ID=cds-WP_005770951.1;Parent=gene-NYQ15_RS06710;Dbxref=GenBank:WP_005770951.1;Name=WP_005770951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820322.1;locus_tag=NYQ15_RS06710;product=sulfite exporter TauE/SafE family protein;protein_id=WP_005770951.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1280255 1281388 . - . ID=gene-NYQ15_RS06715;Name=NYQ15_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06715 NZ_CP103431.1 Protein Homology CDS 1280255 1281388 . - 0 ID=cds-WP_005772955.1;Parent=gene-NYQ15_RS06715;Dbxref=GenBank:WP_005772955.1;Name=WP_005772955.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820323.1;locus_tag=NYQ15_RS06715;product=FUSC family protein;protein_id=WP_005772955.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1281436 1281705 . - . ID=gene-NYQ15_RS06720;Name=NYQ15_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06720 NZ_CP103431.1 GeneMarkS-2+ CDS 1281436 1281705 . - 0 ID=cds-WP_017252782.1;Parent=gene-NYQ15_RS06720;Dbxref=GenBank:WP_017252782.1;Name=WP_017252782.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS06720;product=hypothetical protein;protein_id=WP_017252782.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1281889 1283038 . + . ID=gene-NYQ15_RS06725;Name=NYQ15_RS06725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS06725;pseudo=true NZ_CP103431.1 Protein Homology CDS 1281889 1283038 . + 0 ID=cds-NYQ15_RS06725;Parent=gene-NYQ15_RS06725;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820324.1;locus_tag=NYQ15_RS06725;product=cyclin family putative virulence effector;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1283027 1283950 . - . ID=gene-NYQ15_RS06730;Name=NYQ15_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06730 NZ_CP103431.1 Protein Homology CDS 1283027 1283950 . - 0 ID=cds-WP_259430908.1;Parent=gene-NYQ15_RS06730;Dbxref=GenBank:WP_259430908.1;Name=WP_259430908.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820325.1;locus_tag=NYQ15_RS06730;product=DMT family transporter;protein_id=WP_259430908.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1284059 1287490 . - . ID=gene-NYQ15_RS06740;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=NYQ15_RS06740 NZ_CP103431.1 Protein Homology CDS 1284059 1287490 . - 0 ID=cds-WP_005770963.1;Parent=gene-NYQ15_RS06740;Dbxref=GenBank:WP_005770963.1;Name=WP_005770963.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820326.1;locus_tag=NYQ15_RS06740;product=DNA polymerase III subunit alpha;protein_id=WP_005770963.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1287492 1288613 . - . ID=gene-NYQ15_RS06745;Name=NYQ15_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06745 NZ_CP103431.1 Protein Homology CDS 1287492 1288613 . - 0 ID=cds-WP_010958161.1;Parent=gene-NYQ15_RS06745;Dbxref=GenBank:WP_010958161.1;Name=WP_010958161.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820327.2;locus_tag=NYQ15_RS06745;product=D-alanine--D-alanine ligase family protein;protein_id=WP_010958161.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1288760 1289368 . - . ID=gene-NYQ15_RS06750;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=NYQ15_RS06750 NZ_CP103431.1 Protein Homology CDS 1288760 1289368 . - 0 ID=cds-WP_005770967.1;Parent=gene-NYQ15_RS06750;Dbxref=GenBank:WP_005770967.1;Name=WP_005770967.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820328.1;locus_tag=NYQ15_RS06750;product=ribonuclease HII;protein_id=WP_005770967.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1289380 1289676 . - . ID=gene-NYQ15_RS06755;Name=NYQ15_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06755 NZ_CP103431.1 Protein Homology CDS 1289380 1289676 . - 0 ID=cds-WP_012570792.1;Parent=gene-NYQ15_RS06755;Dbxref=GenBank:WP_012570792.1;Name=WP_012570792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820329.2;locus_tag=NYQ15_RS06755;product=hypothetical protein;protein_id=WP_012570792.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1289663 1291237 . - . ID=gene-NYQ15_RS06760;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=NYQ15_RS06760 NZ_CP103431.1 Protein Homology CDS 1289663 1291237 . - 0 ID=cds-WP_005770971.1;Parent=gene-NYQ15_RS06760;Dbxref=GenBank:WP_005770971.1;Name=WP_005770971.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820330.1;locus_tag=NYQ15_RS06760;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_005770971.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1291274 1292743 . - . ID=gene-NYQ15_RS06765;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=NYQ15_RS06765 NZ_CP103431.1 Protein Homology CDS 1291274 1292743 . - 0 ID=cds-WP_259430910.1;Parent=gene-NYQ15_RS06765;Dbxref=GenBank:WP_259430910.1;Name=WP_259430910.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820331.1;locus_tag=NYQ15_RS06765;product=IMP dehydrogenase;protein_id=WP_259430910.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1292835 1294319 . - . ID=gene-NYQ15_RS06770;Name=NYQ15_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06770 NZ_CP103431.1 Protein Homology CDS 1292835 1294319 . - 0 ID=cds-WP_005772893.1;Parent=gene-NYQ15_RS06770;Dbxref=GenBank:WP_005772893.1;Name=WP_005772893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772893.1;locus_tag=NYQ15_RS06770;product=hypothetical protein;protein_id=WP_005772893.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1294414 1295704 . + . ID=gene-NYQ15_RS06775;Name=NYQ15_RS06775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS06775;pseudo=true NZ_CP103431.1 Protein Homology CDS 1294414 1295704 . + 0 ID=cds-NYQ15_RS06775;Parent=gene-NYQ15_RS06775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820334.1;locus_tag=NYQ15_RS06775;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1295802 1297337 . + . ID=gene-NYQ15_RS06780;Name=treF;gbkey=Gene;gene=treF;gene_biotype=protein_coding;locus_tag=NYQ15_RS06780 NZ_CP103431.1 Protein Homology CDS 1295802 1297337 . + 0 ID=cds-WP_080592793.1;Parent=gene-NYQ15_RS06780;Dbxref=GenBank:WP_080592793.1;Name=WP_080592793.1;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;gene=treF;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820335.3;locus_tag=NYQ15_RS06780;product=alpha%2Calpha-trehalase TreF;protein_id=WP_080592793.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1297248 1298672 . - . ID=gene-NYQ15_RS06785;Name=NYQ15_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06785 NZ_CP103431.1 Protein Homology CDS 1297248 1298672 . - 0 ID=cds-WP_259430911.1;Parent=gene-NYQ15_RS06785;Dbxref=GenBank:WP_259430911.1;Name=WP_259430911.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820336.1;locus_tag=NYQ15_RS06785;product=APC family permease;protein_id=WP_259430911.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1299129 1300865 . + . ID=gene-NYQ15_RS06795;Name=NYQ15_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06795 NZ_CP103431.1 Protein Homology CDS 1299129 1300865 . + 0 ID=cds-WP_259430912.1;Parent=gene-NYQ15_RS06795;Dbxref=GenBank:WP_259430912.1;Name=WP_259430912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820338.2;locus_tag=NYQ15_RS06795;product=CBU_1349 family Dot/Icm T4SS effector;protein_id=WP_259430912.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1300978 1302318 . - . ID=gene-NYQ15_RS06800;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=NYQ15_RS06800 NZ_CP103431.1 Protein Homology CDS 1300978 1302318 . - 0 ID=cds-WP_005770992.1;Parent=gene-NYQ15_RS06800;Dbxref=GenBank:WP_005770992.1;Name=WP_005770992.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820339.1;locus_tag=NYQ15_RS06800;product=phosphoglucosamine mutase;protein_id=WP_005770992.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1302407 1303300 . - . ID=gene-NYQ15_RS06805;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=NYQ15_RS06805 NZ_CP103431.1 Protein Homology CDS 1302407 1303300 . - 0 ID=cds-WP_010958171.1;Parent=gene-NYQ15_RS06805;Dbxref=GenBank:WP_010958171.1;Name=WP_010958171.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820340.1;locus_tag=NYQ15_RS06805;product=dihydropteroate synthase;protein_id=WP_010958171.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1303343 1305295 . - . ID=gene-NYQ15_RS06810;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=NYQ15_RS06810 NZ_CP103431.1 Protein Homology CDS 1303343 1305295 . - 0 ID=cds-WP_005770995.1;Parent=gene-NYQ15_RS06810;Dbxref=GenBank:WP_005770995.1;Name=WP_005770995.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997087.1;locus_tag=NYQ15_RS06810;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_005770995.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1305315 1305953 . - . ID=gene-NYQ15_RS06815;Name=NYQ15_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06815 NZ_CP103431.1 Protein Homology CDS 1305315 1305953 . - 0 ID=cds-WP_005770996.1;Parent=gene-NYQ15_RS06815;Dbxref=GenBank:WP_005770996.1;Name=WP_005770996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820342.1;locus_tag=NYQ15_RS06815;product=RlmE family RNA methyltransferase;protein_id=WP_005770996.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1305975 1306517 . - . ID=gene-NYQ15_RS06820;Name=sufT;gbkey=Gene;gene=sufT;gene_biotype=protein_coding;locus_tag=NYQ15_RS06820 NZ_CP103431.1 Protein Homology CDS 1305975 1306517 . - 0 ID=cds-WP_005770997.1;Parent=gene-NYQ15_RS06820;Dbxref=GenBank:WP_005770997.1;Name=WP_005770997.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufT;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820343.1;locus_tag=NYQ15_RS06820;product=putative Fe-S cluster assembly protein SufT;protein_id=WP_005770997.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1306519 1306872 . - . ID=gene-NYQ15_RS06825;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=NYQ15_RS06825 NZ_CP103431.1 Protein Homology CDS 1306519 1306872 . - 0 ID=cds-WP_005771000.1;Parent=gene-NYQ15_RS06825;Dbxref=GenBank:WP_005771000.1;Name=WP_005771000.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=sufA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820344.1;locus_tag=NYQ15_RS06825;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_005771000.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1306869 1307315 . - . ID=gene-NYQ15_RS06830;Name=sufU;gbkey=Gene;gene=sufU;gene_biotype=protein_coding;locus_tag=NYQ15_RS06830 NZ_CP103431.1 Protein Homology CDS 1306869 1307315 . - 0 ID=cds-WP_005771003.1;Parent=gene-NYQ15_RS06830;Dbxref=GenBank:WP_005771003.1;Name=WP_005771003.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220617.1;locus_tag=NYQ15_RS06830;product=Fe-S cluster assembly sulfur transfer protein SufU;protein_id=WP_005771003.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1307338 1308555 . - . ID=gene-NYQ15_RS06835;Name=NYQ15_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06835 NZ_CP103431.1 Protein Homology CDS 1307338 1308555 . - 0 ID=cds-WP_005771005.1;Parent=gene-NYQ15_RS06835;Dbxref=GenBank:WP_005771005.1;Name=WP_005771005.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820346.1;locus_tag=NYQ15_RS06835;product=cysteine desulfurase;protein_id=WP_005771005.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1308548 1309828 . - . ID=gene-NYQ15_RS06840;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=NYQ15_RS06840 NZ_CP103431.1 Protein Homology CDS 1308548 1309828 . - 0 ID=cds-WP_005771012.1;Parent=gene-NYQ15_RS06840;Dbxref=GenBank:WP_005771012.1;Name=WP_005771012.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820347.1;locus_tag=NYQ15_RS06840;product=Fe-S cluster assembly protein SufD;protein_id=WP_005771012.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1309825 1310559 . - . ID=gene-NYQ15_RS06845;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=NYQ15_RS06845 NZ_CP103431.1 Protein Homology CDS 1309825 1310559 . - 0 ID=cds-WP_005771014.1;Parent=gene-NYQ15_RS06845;Dbxref=GenBank:WP_005771014.1;Name=WP_005771014.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820348.1;locus_tag=NYQ15_RS06845;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_005771014.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1310583 1312025 . - . ID=gene-NYQ15_RS06850;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=NYQ15_RS06850 NZ_CP103431.1 Protein Homology CDS 1310583 1312025 . - 0 ID=cds-WP_005772922.1;Parent=gene-NYQ15_RS06850;Dbxref=GenBank:WP_005772922.1;Name=WP_005772922.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820349.3;locus_tag=NYQ15_RS06850;product=Fe-S cluster assembly protein SufB;protein_id=WP_005772922.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1312018 1312479 . - . ID=gene-NYQ15_RS06855;Name=NYQ15_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06855 NZ_CP103431.1 Protein Homology CDS 1312018 1312479 . - 0 ID=cds-WP_098953103.1;Parent=gene-NYQ15_RS06855;Dbxref=GenBank:WP_098953103.1;Name=WP_098953103.1;Ontology_term=GO:0006355,GO:0016226;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820350.1;locus_tag=NYQ15_RS06855;product=SUF system Fe-S cluster assembly regulator;protein_id=WP_098953103.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1312691 1313827 . + . ID=gene-NYQ15_RS06865;Name=NYQ15_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06865 NZ_CP103431.1 Protein Homology CDS 1312691 1313827 . + 0 ID=cds-WP_005771020.1;Parent=gene-NYQ15_RS06865;Dbxref=GenBank:WP_005771020.1;Name=WP_005771020.1;Ontology_term=GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820351.1;locus_tag=NYQ15_RS06865;product=cation diffusion facilitator family transporter;protein_id=WP_005771020.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1313820 1315196 . + . ID=gene-NYQ15_RS06870;Name=NYQ15_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06870 NZ_CP103431.1 Protein Homology CDS 1313820 1315196 . + 0 ID=cds-WP_005772984.1;Parent=gene-NYQ15_RS06870;Dbxref=GenBank:WP_005772984.1;Name=WP_005772984.1;Ontology_term=GO:0004527;gbkey=CDS;go_function=exonuclease activity|0004527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820352.1;locus_tag=NYQ15_RS06870;product=exodeoxyribonuclease I;protein_id=WP_005772984.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1315220 1316215 . + . ID=gene-NYQ15_RS06875;Name=NYQ15_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06875 NZ_CP103431.1 GeneMarkS-2+ CDS 1315220 1316215 . + 0 ID=cds-WP_259411649.1;Parent=gene-NYQ15_RS06875;Dbxref=GenBank:WP_259411649.1;Name=WP_259411649.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS06875;product=hypothetical protein;protein_id=WP_259411649.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1316357 1316761 . + . ID=gene-NYQ15_RS06880;Name=NYQ15_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06880;partial=true;start_range=.,1316357 NZ_CP103431.1 Protein Homology CDS 1316357 1316761 . + 0 ID=cds-WP_259430916.1;Parent=gene-NYQ15_RS06880;Dbxref=GenBank:WP_259430916.1;Name=WP_259430916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997090.1;locus_tag=NYQ15_RS06880;partial=true;product=tetratricopeptide repeat protein;protein_id=WP_259430916.1;start_range=.,1316357;transl_table=11 NZ_CP103431.1 RefSeq gene 1316795 1317127 . - . ID=gene-NYQ15_RS06885;Name=NYQ15_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06885 NZ_CP103431.1 Protein Homology CDS 1316795 1317127 . - 0 ID=cds-WP_005771026.1;Parent=gene-NYQ15_RS06885;Dbxref=GenBank:WP_005771026.1;Name=WP_005771026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820355.1;locus_tag=NYQ15_RS06885;product=hypothetical protein;protein_id=WP_005771026.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1317310 1317988 . - . ID=gene-NYQ15_RS06890;Name=NYQ15_RS06890;end_range=1317988,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06890;partial=true NZ_CP103431.1 Protein Homology CDS 1317310 1317988 . - 1 ID=cds-WP_259430918.1;Parent=gene-NYQ15_RS06890;Dbxref=GenBank:WP_259430918.1;Name=WP_259430918.1;end_range=1317988,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772985.1;locus_tag=NYQ15_RS06890;partial=true;product=DUF1601 domain-containing protein;protein_id=WP_259430918.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1318044 1318128 . - . ID=gene-NYQ15_RS06895;Name=NYQ15_RS06895;end_range=1318128,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06895;partial=true;start_range=.,1318044 NZ_CP103431.1 Protein Homology CDS 1318044 1318128 . - 0 ID=cds-WP_259431111.1;Parent=gene-NYQ15_RS06895;Dbxref=GenBank:WP_259431111.1;Name=WP_259431111.1;end_range=1318128,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019293.5;locus_tag=NYQ15_RS06895;partial=true;product=DUF1601 domain-containing protein;protein_id=WP_259431111.1;start_range=.,1318044;transl_table=11 NZ_CP103431.1 RefSeq gene 1318603 1319128 . - . ID=gene-NYQ15_RS06900;Name=NYQ15_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06900;partial=true;start_range=.,1318603 NZ_CP103431.1 Protein Homology CDS 1318603 1319128 . - 0 ID=cds-WP_259430920.1;Parent=gene-NYQ15_RS06900;Dbxref=GenBank:WP_259430920.1;Name=WP_259430920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772985.1;locus_tag=NYQ15_RS06900;partial=true;product=DUF1601 domain-containing protein;protein_id=WP_259430920.1;start_range=.,1318603;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1319327 1320344 . + . ID=gene-NYQ15_RS06905;Name=NYQ15_RS06905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS06905;pseudo=true NZ_CP103431.1 Protein Homology CDS 1319327 1320344 . + 0 ID=cds-NYQ15_RS06905;Parent=gene-NYQ15_RS06905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820358.1;locus_tag=NYQ15_RS06905;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1320544 1321488 . - . ID=gene-NYQ15_RS06910;Name=cbEPF1;gbkey=Gene;gene=cbEPF1;gene_biotype=protein_coding;locus_tag=NYQ15_RS06910 NZ_CP103431.1 Protein Homology CDS 1320544 1321488 . - 0 ID=cds-WP_230454463.1;Parent=gene-NYQ15_RS06910;Dbxref=GenBank:WP_230454463.1;Name=WP_230454463.1;gbkey=CDS;gene=cbEPF1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820359.1;locus_tag=NYQ15_RS06910;product=Dot/Icm T4SS effector protein CbEPF1;protein_id=WP_230454463.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1321723 1322403 . - . ID=gene-NYQ15_RS06915;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=NYQ15_RS06915 NZ_CP103431.1 Protein Homology CDS 1321723 1322403 . - 0 ID=cds-WP_005771031.1;Parent=gene-NYQ15_RS06915;Dbxref=GenBank:WP_005771031.1;Name=WP_005771031.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820360.1;locus_tag=NYQ15_RS06915;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_005771031.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1322546 1323127 . - . ID=gene-NYQ15_RS06925;Name=NYQ15_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06925 NZ_CP103431.1 Protein Homology CDS 1322546 1323127 . - 0 ID=cds-WP_005771033.1;Parent=gene-NYQ15_RS06925;Dbxref=GenBank:WP_005771033.1;Name=WP_005771033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820361.1;locus_tag=NYQ15_RS06925;product=hypothetical protein;protein_id=WP_005771033.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1323228 1324520 . + . ID=gene-NYQ15_RS06930;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=NYQ15_RS06930 NZ_CP103431.1 Protein Homology CDS 1323228 1324520 . + 0 ID=cds-WP_005771035.1;Parent=gene-NYQ15_RS06930;Dbxref=GenBank:WP_005771035.1;Name=WP_005771035.1;Ontology_term=GO:0008153,GO:0009396,GO:0046820;gbkey=CDS;gene=pabB;go_function=4-amino-4-deoxychorismate synthase activity|0046820||IEA;go_process=para-aminobenzoic acid biosynthetic process|0008153||IEA,folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820362.1;locus_tag=NYQ15_RS06930;product=aminodeoxychorismate synthase component I;protein_id=WP_005771035.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1324517 1324996 . + . ID=gene-NYQ15_RS06935;Name=NYQ15_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06935 NZ_CP103431.1 Protein Homology CDS 1324517 1324996 . + 0 ID=cds-WP_005771036.1;Parent=gene-NYQ15_RS06935;Dbxref=GenBank:WP_005771036.1;Name=WP_005771036.1;Ontology_term=GO:0008270,GO:0052717;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,tRNA-specific adenosine-34 deaminase activity|0052717||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820363.1;locus_tag=NYQ15_RS06935;product=nucleoside deaminase;protein_id=WP_005771036.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1325029 1327173 . - . ID=gene-NYQ15_RS06940;Name=NYQ15_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06940 NZ_CP103431.1 Protein Homology CDS 1325029 1327173 . - 0 ID=cds-WP_259430921.1;Parent=gene-NYQ15_RS06940;Dbxref=GenBank:WP_259430921.1;Name=WP_259430921.1;Ontology_term=GO:0015970,GO:0005524,GO:0005525,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820364.1;locus_tag=NYQ15_RS06940;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=WP_259430921.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1327251 1328615 . + . ID=gene-NYQ15_RS06945;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=pseudogene;locus_tag=NYQ15_RS06945;pseudo=true NZ_CP103431.1 Protein Homology CDS 1327251 1328615 . + 0 ID=cds-NYQ15_RS06945;Parent=gene-NYQ15_RS06945;Note=internal stop;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820365.1;locus_tag=NYQ15_RS06945;product=RIP metalloprotease RseP;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1329172 1331152 . - . ID=gene-NYQ15_RS06950;Name=coxK2;gbkey=Gene;gene=coxK2;gene_biotype=pseudogene;locus_tag=NYQ15_RS06950;pseudo=true NZ_CP103431.1 Protein Homology CDS 1329172 1331152 . - 0 ID=cds-NYQ15_RS06950;Parent=gene-NYQ15_RS06950;Note=frameshifted;gbkey=CDS;gene=coxK2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771043.1;locus_tag=NYQ15_RS06950;product=Dot/Icm T4SS effector CoxK2;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1331376 1332116 . + . ID=gene-NYQ15_RS06955;Name=NYQ15_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06955 NZ_CP103431.1 Protein Homology CDS 1331376 1332116 . + 0 ID=cds-WP_005771677.1;Parent=gene-NYQ15_RS06955;Dbxref=GenBank:WP_005771677.1;Name=WP_005771677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771677.1;locus_tag=NYQ15_RS06955;product=hypothetical protein;protein_id=WP_005771677.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1332152 1332997 . - . ID=gene-NYQ15_RS06960;Name=NYQ15_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06960 NZ_CP103431.1 Protein Homology CDS 1332152 1332997 . - 0 ID=cds-WP_259430922.1;Parent=gene-NYQ15_RS06960;Dbxref=GenBank:WP_259430922.1;Name=WP_259430922.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820369.1;locus_tag=NYQ15_RS06960;product=DoxX family protein;protein_id=WP_259430922.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1333175 1333993 . - . ID=gene-NYQ15_RS06965;Name=NYQ15_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06965 NZ_CP103431.1 Protein Homology CDS 1333175 1333993 . - 0 ID=cds-WP_011996650.1;Parent=gene-NYQ15_RS06965;Dbxref=GenBank:WP_011996650.1;Name=WP_011996650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820370.1;locus_tag=NYQ15_RS06965;product=phosphatidate cytidylyltransferase;protein_id=WP_011996650.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1333983 1334696 . - . ID=gene-NYQ15_RS06970;Name=NYQ15_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06970 NZ_CP103431.1 Protein Homology CDS 1333983 1334696 . - 0 ID=cds-WP_005771680.1;Parent=gene-NYQ15_RS06970;Dbxref=GenBank:WP_005771680.1;Name=WP_005771680.1;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820371.1;locus_tag=NYQ15_RS06970;product=isoprenyl transferase;protein_id=WP_005771680.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1334693 1335250 . - . ID=gene-NYQ15_RS06975;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=NYQ15_RS06975 NZ_CP103431.1 Protein Homology CDS 1334693 1335250 . - 0 ID=cds-WP_005771681.1;Parent=gene-NYQ15_RS06975;Dbxref=GenBank:WP_005771681.1;Name=WP_005771681.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820372.1;locus_tag=NYQ15_RS06975;product=ribosome recycling factor;protein_id=WP_005771681.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1335328 1336059 . - . ID=gene-NYQ15_RS06980;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=NYQ15_RS06980 NZ_CP103431.1 Protein Homology CDS 1335328 1336059 . - 0 ID=cds-WP_005771682.1;Parent=gene-NYQ15_RS06980;Dbxref=GenBank:WP_005771682.1;Name=WP_005771682.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820373.1;locus_tag=NYQ15_RS06980;product=UMP kinase;protein_id=WP_005771682.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1336059 1336949 . - . ID=gene-NYQ15_RS06985;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=NYQ15_RS06985 NZ_CP103431.1 Protein Homology CDS 1336059 1336949 . - 0 ID=cds-WP_005772548.1;Parent=gene-NYQ15_RS06985;Dbxref=GenBank:WP_005772548.1;Name=WP_005772548.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820374.1;locus_tag=NYQ15_RS06985;product=translation elongation factor Ts;protein_id=WP_005772548.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1337220 1337900 . - . ID=gene-NYQ15_RS06990;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=pseudogene;locus_tag=NYQ15_RS06990;partial=true;pseudo=true;start_range=.,1337220 NZ_CP103431.1 Protein Homology CDS 1337220 1337900 . - 0 ID=cds-NYQ15_RS06990;Parent=gene-NYQ15_RS06990;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017130857.1;locus_tag=NYQ15_RS06990;partial=true;product=30S ribosomal protein S2;pseudo=true;start_range=.,1337220;transl_table=11 NZ_CP103431.1 RefSeq gene 1338120 1338770 . + . ID=gene-NYQ15_RS06995;Name=NYQ15_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS06995 NZ_CP103431.1 Protein Homology CDS 1338120 1338770 . + 0 ID=cds-WP_005771687.1;Parent=gene-NYQ15_RS06995;Dbxref=GenBank:WP_005771687.1;Name=WP_005771687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820376.1;locus_tag=NYQ15_RS06995;product=CBU_1387 family Dot/Icm T4SS effector;protein_id=WP_005771687.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1338861 1339637 . + . ID=gene-NYQ15_RS07000;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=NYQ15_RS07000 NZ_CP103431.1 Protein Homology CDS 1338861 1339637 . + 0 ID=cds-WP_005771690.1;Parent=gene-NYQ15_RS07000;Dbxref=GenBank:WP_005771690.1;Name=WP_005771690.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220633.1;locus_tag=NYQ15_RS07000;product=type I methionyl aminopeptidase;protein_id=WP_005771690.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1339634 1341022 . - . ID=gene-NYQ15_RS07005;Name=NYQ15_RS07005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS07005;pseudo=true NZ_CP103431.1 Protein Homology CDS 1339634 1341022 . - 0 ID=cds-NYQ15_RS07005;Parent=gene-NYQ15_RS07005;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012503.5;locus_tag=NYQ15_RS07005;product=pyridoxal phosphate-dependent decarboxylase family protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1341187 1341843 . + . ID=gene-NYQ15_RS07010;Name=NYQ15_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07010 NZ_CP103431.1 Protein Homology CDS 1341187 1341843 . + 0 ID=cds-WP_005772543.1;Parent=gene-NYQ15_RS07010;Dbxref=GenBank:WP_005772543.1;Name=WP_005772543.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771694.1;locus_tag=NYQ15_RS07010;product=phosphoadenylyl-sulfate reductase;protein_id=WP_005772543.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1341871 1342661 . + . ID=gene-NYQ15_RS07015;Name=NYQ15_RS07015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS07015;pseudo=true NZ_CP103431.1 Protein Homology CDS 1341871 1342661 . + 0 ID=cds-NYQ15_RS07015;Parent=gene-NYQ15_RS07015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014709.5;locus_tag=NYQ15_RS07015;product=phosphosulfolactate synthase;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1342652 1343347 . + . ID=gene-NYQ15_RS07020;Name=NYQ15_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07020 NZ_CP103431.1 Protein Homology CDS 1342652 1343347 . + 0 ID=cds-WP_005771696.1;Parent=gene-NYQ15_RS07020;Dbxref=GenBank:WP_005771696.1;Name=WP_005771696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253129.1;locus_tag=NYQ15_RS07020;product=2-phosphosulfolactate phosphatase;protein_id=WP_005771696.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1343312 1344625 . - . ID=gene-NYQ15_RS07025;Name=NYQ15_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07025 NZ_CP103431.1 Protein Homology CDS 1343312 1344625 . - 0 ID=cds-WP_310795125.1;Parent=gene-NYQ15_RS07025;Dbxref=GenBank:WP_310795125.1;Name=WP_310795125.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF012873.5;locus_tag=NYQ15_RS07025;product=condensation domain-containing protein;protein_id=WP_310795125.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1344600 1347008 . - . ID=gene-NYQ15_RS07030;Name=NYQ15_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07030 NZ_CP103431.1 Protein Homology CDS 1344600 1347008 . - 0 ID=cds-WP_259430924.1;Parent=gene-NYQ15_RS07030;Dbxref=GenBank:WP_259430924.1;Name=WP_259430924.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01733.1;locus_tag=NYQ15_RS07030;product=amino acid adenylation domain-containing protein;protein_id=WP_259430924.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1347047 1347742 . - . ID=gene-NYQ15_RS07035;Name=NYQ15_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07035 NZ_CP103431.1 Protein Homology CDS 1347047 1347742 . - 0 ID=cds-WP_032075105.1;Parent=gene-NYQ15_RS07035;Dbxref=GenBank:WP_032075105.1;Name=WP_032075105.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771700.1;locus_tag=NYQ15_RS07035;product=condensation domain-containing protein;protein_id=WP_032075105.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1347944 1348471 . + . ID=gene-NYQ15_RS07040;Name=NYQ15_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07040 NZ_CP103431.1 Protein Homology CDS 1347944 1348471 . + 0 ID=cds-WP_098953114.1;Parent=gene-NYQ15_RS07040;Dbxref=GenBank:WP_098953114.1;Name=WP_098953114.1;Ontology_term=GO:0018104,GO:0016746,GO:0071972;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820379.1;locus_tag=NYQ15_RS07040;product=L%2CD-transpeptidase;protein_id=WP_098953114.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1348490 1348936 . - . ID=gene-NYQ15_RS07045;Name=NYQ15_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07045 NZ_CP103431.1 Protein Homology CDS 1348490 1348936 . - 0 ID=cds-WP_005772546.1;Parent=gene-NYQ15_RS07045;Dbxref=GenBank:WP_005772546.1;Name=WP_005772546.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820380.1;locus_tag=NYQ15_RS07045;product=GtrA family protein;protein_id=WP_005772546.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1348933 1349817 . - . ID=gene-NYQ15_RS07050;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=NYQ15_RS07050 NZ_CP103431.1 Protein Homology CDS 1348933 1349817 . - 0 ID=cds-WP_005772553.1;Parent=gene-NYQ15_RS07050;Dbxref=GenBank:WP_005772553.1;Name=WP_005772553.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820381.1;locus_tag=NYQ15_RS07050;product=succinate--CoA ligase subunit alpha;protein_id=WP_005772553.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1349817 1350989 . - . ID=gene-NYQ15_RS07055;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=NYQ15_RS07055 NZ_CP103431.1 Protein Homology CDS 1349817 1350989 . - 0 ID=cds-WP_005772545.1;Parent=gene-NYQ15_RS07055;Dbxref=GenBank:WP_005772545.1;Name=WP_005772545.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820382.1;locus_tag=NYQ15_RS07055;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_005772545.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1351191 1352408 . - . ID=gene-NYQ15_RS07060;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=NYQ15_RS07060 NZ_CP103431.1 Protein Homology CDS 1351191 1352408 . - 0 ID=cds-WP_005771710.1;Parent=gene-NYQ15_RS07060;Dbxref=GenBank:WP_005771710.1;Name=WP_005771710.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820383.1;locus_tag=NYQ15_RS07060;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_005771710.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1352418 1355222 . - . ID=gene-NYQ15_RS07065;Name=NYQ15_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07065 NZ_CP103431.1 Protein Homology CDS 1352418 1355222 . - 0 ID=cds-WP_259430925.1;Parent=gene-NYQ15_RS07065;Dbxref=GenBank:WP_259430925.1;Name=WP_259430925.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820384.1;locus_tag=NYQ15_RS07065;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_259430925.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1355246 1355977 . - . ID=gene-NYQ15_RS07070;Name=NYQ15_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07070 NZ_CP103431.1 Protein Homology CDS 1355246 1355977 . - 0 ID=cds-WP_005771712.1;Parent=gene-NYQ15_RS07070;Dbxref=GenBank:WP_005771712.1;Name=WP_005771712.1;Ontology_term=GO:0008177,GO:0046872;gbkey=CDS;go_function=succinate dehydrogenase (quinone) activity|0008177||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820385.1;locus_tag=NYQ15_RS07070;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_005771712.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1355984 1357747 . - . ID=gene-NYQ15_RS07075;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=NYQ15_RS07075 NZ_CP103431.1 Protein Homology CDS 1355984 1357747 . - 0 ID=cds-WP_005771713.1;Parent=gene-NYQ15_RS07075;Dbxref=GenBank:WP_005771713.1;Name=WP_005771713.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820386.1;locus_tag=NYQ15_RS07075;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_005771713.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1357760 1358107 . - . ID=gene-NYQ15_RS07080;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=NYQ15_RS07080 NZ_CP103431.1 Protein Homology CDS 1357760 1358107 . - 0 ID=cds-WP_012570837.1;Parent=gene-NYQ15_RS07080;Dbxref=GenBank:WP_012570837.1;Name=WP_012570837.1;Ontology_term=GO:0006099,GO:0000104,GO:0020037,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhD;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,heme binding|0020037||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820387.2;locus_tag=NYQ15_RS07080;product=succinate dehydrogenase%2C hydrophobic membrane anchor protein;protein_id=WP_012570837.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1358095 1358592 . - . ID=gene-NYQ15_RS07085;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;locus_tag=NYQ15_RS07085 NZ_CP103431.1 Protein Homology CDS 1358095 1358592 . - 0 ID=cds-WP_012570838.1;Parent=gene-NYQ15_RS07085;Dbxref=GenBank:WP_012570838.1;Name=WP_012570838.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0045273;gbkey=CDS;gene=sdhC;go_component=respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: protein motif:HMM:NF013307.5;locus_tag=NYQ15_RS07085;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=WP_012570838.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1358605 1358937 . - . ID=gene-NYQ15_RS07090;Name=NYQ15_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07090 NZ_CP103431.1 Protein Homology CDS 1358605 1358937 . - 0 ID=cds-WP_005771716.1;Parent=gene-NYQ15_RS07090;Dbxref=GenBank:WP_005771716.1;Name=WP_005771716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820389.1;locus_tag=NYQ15_RS07090;product=hypothetical protein;protein_id=WP_005771716.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1358947 1359228 . + . ID=gene-NYQ15_RS07095;Name=NYQ15_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07095 NZ_CP103431.1 Protein Homology CDS 1358947 1359228 . + 0 ID=cds-WP_010958205.1;Parent=gene-NYQ15_RS07095;Dbxref=GenBank:WP_010958205.1;Name=WP_010958205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002333003.1;locus_tag=NYQ15_RS07095;product=hypothetical protein;protein_id=WP_010958205.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1359364 1359784 . - . ID=gene-NYQ15_RS07100;Name=coxDFB3;end_range=1359784,.;gbkey=Gene;gene=coxDFB3;gene_biotype=pseudogene;locus_tag=NYQ15_RS07100;partial=true;pseudo=true NZ_CP103431.1 Protein Homology CDS 1359364 1359784 . - 1 ID=cds-NYQ15_RS07100;Parent=gene-NYQ15_RS07100;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1359784,.;gbkey=CDS;gene=coxDFB3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996640.1;locus_tag=NYQ15_RS07100;partial=true;product=Dot/Icm T4SS effector CoxDFB3;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1359815 1360199 . - . ID=gene-NYQ15_RS07105;Name=coxDFB3;gbkey=Gene;gene=coxDFB3;gene_biotype=pseudogene;locus_tag=NYQ15_RS07105;partial=true;pseudo=true;start_range=.,1359815 NZ_CP103431.1 Protein Homology CDS 1359815 1360199 . - 0 ID=cds-NYQ15_RS07105;Parent=gene-NYQ15_RS07105;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=coxDFB3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996640.1;locus_tag=NYQ15_RS07105;partial=true;product=Dot/Icm T4SS effector CoxDFB3;pseudo=true;start_range=.,1359815;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1360731 1361178 . + . ID=gene-NYQ15_RS07110;Name=NYQ15_RS07110;end_range=1361178,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS07110;partial=true;pseudo=true NZ_CP103431.1 Protein Homology CDS 1360731 1361178 . + 0 ID=cds-NYQ15_RS07110;Parent=gene-NYQ15_RS07110;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1361178,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996639.1;locus_tag=NYQ15_RS07110;partial=true;product=CBU_1409 family Dot/Icm T4SS effector;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1361293 1361569 . + . ID=gene-NYQ15_RS07115;Name=NYQ15_RS07115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS07115;partial=true;pseudo=true;start_range=.,1361293 NZ_CP103431.1 Protein Homology CDS 1361293 1361569 . + 1 ID=cds-NYQ15_RS07115;Parent=gene-NYQ15_RS07115;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996639.1;locus_tag=NYQ15_RS07115;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1361293;transl_table=11 NZ_CP103431.1 RefSeq gene 1361803 1363095 . + . ID=gene-NYQ15_RS07120;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=NYQ15_RS07120 NZ_CP103431.1 Protein Homology CDS 1361803 1363095 . + 0 ID=cds-WP_005771719.1;Parent=gene-NYQ15_RS07120;Dbxref=GenBank:WP_005771719.1;Name=WP_005771719.1;Ontology_term=GO:0006099,GO:0004108,GO:0005737;gbkey=CDS;gene=gltA;go_component=cytoplasm|0005737||IEA;go_function=citrate (Si)-synthase activity|0004108||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820394.1;locus_tag=NYQ15_RS07120;product=citrate synthase;protein_id=WP_005771719.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1363349 1364170 . - . ID=gene-NYQ15_RS07130;Name=NYQ15_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07130 NZ_CP103431.1 Protein Homology CDS 1363349 1364170 . - 0 ID=cds-WP_005771723.1;Parent=gene-NYQ15_RS07130;Dbxref=GenBank:WP_005771723.1;Name=WP_005771723.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820396.2;locus_tag=NYQ15_RS07130;product=outer membrane protein;protein_id=WP_005771723.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1364192 1364971 . - . ID=gene-NYQ15_RS07135;Name=NYQ15_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07135 NZ_CP103431.1 Protein Homology CDS 1364192 1364971 . - 0 ID=cds-WP_005771725.1;Parent=gene-NYQ15_RS07135;Dbxref=GenBank:WP_005771725.1;Name=WP_005771725.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820397.1;locus_tag=NYQ15_RS07135;product=outer membrane protein;protein_id=WP_005771725.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1365015 1365806 . - . ID=gene-NYQ15_RS07140;Name=NYQ15_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07140 NZ_CP103431.1 Protein Homology CDS 1365015 1365806 . - 0 ID=cds-WP_005771726.1;Parent=gene-NYQ15_RS07140;Dbxref=GenBank:WP_005771726.1;Name=WP_005771726.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820398.1;locus_tag=NYQ15_RS07140;product=outer membrane protein;protein_id=WP_005771726.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1365898 1366860 . - . ID=gene-NYQ15_RS07145;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=NYQ15_RS07145 NZ_CP103431.1 Protein Homology CDS 1365898 1366860 . - 0 ID=cds-WP_005771727.1;Parent=gene-NYQ15_RS07145;Dbxref=GenBank:WP_005771727.1;Name=WP_005771727.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996634.1;locus_tag=NYQ15_RS07145;product=thiamine-phosphate kinase;protein_id=WP_005771727.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1367051 1367701 . + . ID=gene-NYQ15_RS07150;Name=NYQ15_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07150 NZ_CP103431.1 Protein Homology CDS 1367051 1367701 . + 0 ID=cds-WP_259430926.1;Parent=gene-NYQ15_RS07150;Dbxref=GenBank:WP_259430926.1;Name=WP_259430926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220648.1;locus_tag=NYQ15_RS07150;product=S24 family peptidase;protein_id=WP_259430926.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1367824 1368240 . - . ID=gene-NYQ15_RS07155;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=NYQ15_RS07155 NZ_CP103431.1 Protein Homology CDS 1367824 1368240 . - 0 ID=cds-WP_005771734.1;Parent=gene-NYQ15_RS07155;Dbxref=GenBank:WP_005771734.1;Name=WP_005771734.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820401.1;locus_tag=NYQ15_RS07155;product=transcription antitermination factor NusB;protein_id=WP_005771734.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1368230 1368703 . - . ID=gene-NYQ15_RS07160;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=NYQ15_RS07160 NZ_CP103431.1 Protein Homology CDS 1368230 1368703 . - 0 ID=cds-WP_005771735.1;Parent=gene-NYQ15_RS07160;Dbxref=GenBank:WP_005771735.1;Name=WP_005771735.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820402.1;locus_tag=NYQ15_RS07160;product=transcriptional regulator NrdR;protein_id=WP_005771735.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1368703 1369962 . - . ID=gene-NYQ15_RS07165;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=NYQ15_RS07165 NZ_CP103431.1 Protein Homology CDS 1368703 1369962 . - 0 ID=cds-WP_005771737.1;Parent=gene-NYQ15_RS07165;Dbxref=GenBank:WP_005771737.1;Name=WP_005771737.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820403.1;locus_tag=NYQ15_RS07165;product=serine hydroxymethyltransferase;protein_id=WP_005771737.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1370325 1371161 . + . ID=gene-NYQ15_RS07170;Name=NYQ15_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07170 NZ_CP103431.1 Protein Homology CDS 1370325 1371161 . + 0 ID=cds-WP_098953118.1;Parent=gene-NYQ15_RS07170;Dbxref=GenBank:WP_098953118.1;Name=WP_098953118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771739.1;locus_tag=NYQ15_RS07170;product=hypothetical protein;protein_id=WP_098953118.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1371253 1372608 . - . ID=gene-NYQ15_RS07175;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=NYQ15_RS07175 NZ_CP103431.1 Protein Homology CDS 1371253 1372608 . - 0 ID=cds-WP_005771741.1;Parent=gene-NYQ15_RS07175;Dbxref=GenBank:WP_005771741.1;Name=WP_005771741.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820406.1;locus_tag=NYQ15_RS07175;product=DNA repair protein RadA;protein_id=WP_005771741.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1372688 1372831 . + . ID=gene-NYQ15_RS07180;Name=NYQ15_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07180 NZ_CP103431.1 Protein Homology CDS 1372688 1372831 . + 0 ID=cds-WP_005772979.1;Parent=gene-NYQ15_RS07180;Dbxref=GenBank:WP_005772979.1;Name=WP_005772979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002333004.1;locus_tag=NYQ15_RS07180;product=hypothetical protein;protein_id=WP_005772979.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1372982 1373986 . - . ID=gene-NYQ15_RS07190;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=NYQ15_RS07190 NZ_CP103431.1 Protein Homology CDS 1372982 1373986 . - 0 ID=cds-WP_012220651.1;Parent=gene-NYQ15_RS07190;Dbxref=GenBank:WP_012220651.1;Name=WP_012220651.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820408.1;locus_tag=NYQ15_RS07190;product=porphobilinogen synthase;protein_id=WP_012220651.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1374004 1374456 . - . ID=gene-NYQ15_RS07195;Name=coxDFB4;gbkey=Gene;gene=coxDFB4;gene_biotype=protein_coding;locus_tag=NYQ15_RS07195 NZ_CP103431.1 Protein Homology CDS 1374004 1374456 . - 0 ID=cds-WP_005771746.1;Parent=gene-NYQ15_RS07195;Dbxref=GenBank:WP_005771746.1;Name=WP_005771746.1;gbkey=CDS;gene=coxDFB4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820409.1;locus_tag=NYQ15_RS07195;product=Dot/Icm type IV secretion system effector CoxDFB4;protein_id=WP_005771746.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1374441 1374554 . + . ID=gene-NYQ15_RS07200;Name=NYQ15_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07200 NZ_CP103431.1 Protein Homology CDS 1374441 1374554 . + 0 ID=cds-WP_010958219.1;Parent=gene-NYQ15_RS07200;Dbxref=GenBank:WP_010958219.1;Name=WP_010958219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820410.1;locus_tag=NYQ15_RS07200;product=hypothetical protein;protein_id=WP_010958219.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1374815 1378840 . - . ID=gene-NYQ15_RS07205;Name=NYQ15_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07205 NZ_CP103431.1 Protein Homology CDS 1374815 1378840 . - 0 ID=cds-WP_098953120.1;Parent=gene-NYQ15_RS07205;Dbxref=GenBank:WP_098953120.1;Name=WP_098953120.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF012234.5;locus_tag=NYQ15_RS07205;product=AAA family ATPase;protein_id=WP_098953120.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1378876 1380171 . - . ID=gene-NYQ15_RS07210;Name=NYQ15_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07210 NZ_CP103431.1 GeneMarkS-2+ CDS 1378876 1380171 . - 0 ID=cds-WP_259430929.1;Parent=gene-NYQ15_RS07210;Dbxref=GenBank:WP_259430929.1;Name=WP_259430929.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS07210;product=hypothetical protein;protein_id=WP_259430929.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1380384 1380499 . - . ID=gene-NYQ15_RS07215;Name=NYQ15_RS07215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS07215;pseudo=true NZ_CP103431.1 Protein Homology CDS 1380384 1380499 . - 0 ID=cds-NYQ15_RS07215;Parent=gene-NYQ15_RS07215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002333005.1;locus_tag=NYQ15_RS07215;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1380631 1381176 . + . ID=gene-NYQ15_RS07220;Name=NYQ15_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07220 NZ_CP103431.1 Protein Homology CDS 1380631 1381176 . + 0 ID=cds-WP_005772447.1;Parent=gene-NYQ15_RS07220;Dbxref=GenBank:WP_005772447.1;Name=WP_005772447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820413.1;locus_tag=NYQ15_RS07220;product=DUF962 domain-containing protein;protein_id=WP_005772447.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1381637 1381981 . + . ID=gene-NYQ15_RS07230;Name=NYQ15_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07230 NZ_CP103431.1 Protein Homology CDS 1381637 1381981 . + 0 ID=cds-WP_010958221.1;Parent=gene-NYQ15_RS07230;Dbxref=GenBank:WP_010958221.1;Name=WP_010958221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002333006.1;locus_tag=NYQ15_RS07230;product=hypothetical protein;protein_id=WP_010958221.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1381986 1382915 . - . ID=gene-NYQ15_RS07235;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=NYQ15_RS07235 NZ_CP103431.1 Protein Homology CDS 1381986 1382915 . - 0 ID=cds-WP_005769034.1;Parent=gene-NYQ15_RS07235;Dbxref=GenBank:WP_005769034.1;Name=WP_005769034.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_338283.1;locus_tag=NYQ15_RS07235;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_005769034.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1382893 1383252 . - . ID=gene-NYQ15_RS07240;Name=NYQ15_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07240 NZ_CP103431.1 Protein Homology CDS 1382893 1383252 . - 0 ID=cds-WP_005769039.1;Parent=gene-NYQ15_RS07240;Dbxref=GenBank:WP_005769039.1;Name=WP_005769039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820414.1;locus_tag=NYQ15_RS07240;product=ribosome-binding factor A;protein_id=WP_005769039.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1383340 1385751 . - . ID=gene-NYQ15_RS07245;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=NYQ15_RS07245 NZ_CP103431.1 Protein Homology CDS 1383340 1385751 . - 0 ID=cds-WP_005769041.1;Parent=gene-NYQ15_RS07245;Dbxref=GenBank:WP_005769041.1;Name=WP_005769041.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820415.1;locus_tag=NYQ15_RS07245;product=translation initiation factor IF-2;protein_id=WP_005769041.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1385757 1387268 . - . ID=gene-NYQ15_RS07250;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=NYQ15_RS07250 NZ_CP103431.1 Protein Homology CDS 1385757 1387268 . - 0 ID=cds-WP_005769044.1;Parent=gene-NYQ15_RS07250;Dbxref=GenBank:WP_005769044.1;Name=WP_005769044.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820416.1;locus_tag=NYQ15_RS07250;product=transcription termination factor NusA;protein_id=WP_005769044.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1387272 1387733 . - . ID=gene-NYQ15_RS07255;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=NYQ15_RS07255 NZ_CP103431.1 Protein Homology CDS 1387272 1387733 . - 0 ID=cds-WP_005769046.1;Parent=gene-NYQ15_RS07255;Dbxref=GenBank:WP_005769046.1;Name=WP_005769046.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820417.1;locus_tag=NYQ15_RS07255;product=ribosome maturation factor RimP;protein_id=WP_005769046.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1387794 1387870 . - . ID=gene-NYQ15_RS07260;Name=NYQ15_RS07260;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS07260 NZ_CP103431.1 tRNAscan-SE tRNA 1387794 1387870 . - . ID=rna-NYQ15_RS07260;Parent=gene-NYQ15_RS07260;anticodon=(pos:complement(1387834..1387836));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS07260;product=tRNA-Met NZ_CP103431.1 tRNAscan-SE exon 1387794 1387870 . - . ID=exon-NYQ15_RS07260-1;Parent=rna-NYQ15_RS07260;anticodon=(pos:complement(1387834..1387836));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS07260;product=tRNA-Met NZ_CP103431.1 RefSeq gene 1388112 1389560 . - . ID=gene-NYQ15_RS07265;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=NYQ15_RS07265 NZ_CP103431.1 Protein Homology CDS 1388112 1389560 . - 0 ID=cds-WP_032074855.1;Parent=gene-NYQ15_RS07265;Dbxref=GenBank:WP_032074855.1;Name=WP_032074855.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820418.1;locus_tag=NYQ15_RS07265;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_032074855.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1389570 1391090 . - . ID=gene-NYQ15_RS07270;Name=NYQ15_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07270 NZ_CP103431.1 Protein Homology CDS 1389570 1391090 . - 0 ID=cds-WP_259430930.1;Parent=gene-NYQ15_RS07270;Dbxref=GenBank:WP_259430930.1;Name=WP_259430930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820419.1;locus_tag=NYQ15_RS07270;product=NuoM family protein;protein_id=WP_259430930.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1391095 1393056 . - . ID=gene-NYQ15_RS07275;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=NYQ15_RS07275 NZ_CP103431.1 Protein Homology CDS 1391095 1393056 . - 0 ID=cds-WP_005772452.1;Parent=gene-NYQ15_RS07275;Dbxref=GenBank:WP_005772452.1;Name=WP_005772452.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820420.1;locus_tag=NYQ15_RS07275;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_005772452.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1393113 1393418 . - . ID=gene-NYQ15_RS07280;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=NYQ15_RS07280 NZ_CP103431.1 Protein Homology CDS 1393113 1393418 . - 0 ID=cds-WP_005769056.1;Parent=gene-NYQ15_RS07280;Dbxref=GenBank:WP_005769056.1;Name=WP_005769056.1;gbkey=CDS;gene=nuoK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820421.1;locus_tag=NYQ15_RS07280;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_005769056.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1393415 1394020 . - . ID=gene-NYQ15_RS07285;Name=NYQ15_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07285 NZ_CP103431.1 Protein Homology CDS 1393415 1394020 . - 0 ID=cds-WP_005769059.1;Parent=gene-NYQ15_RS07285;Dbxref=GenBank:WP_005769059.1;Name=WP_005769059.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820422.1;locus_tag=NYQ15_RS07285;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_005769059.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1394034 1394525 . - . ID=gene-NYQ15_RS07290;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=NYQ15_RS07290 NZ_CP103431.1 Protein Homology CDS 1394034 1394525 . - 0 ID=cds-WP_005769060.1;Parent=gene-NYQ15_RS07290;Dbxref=GenBank:WP_005769060.1;Name=WP_005769060.1;Ontology_term=GO:0016651,GO:0051539;gbkey=CDS;gene=nuoI;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820423.3;locus_tag=NYQ15_RS07290;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_005769060.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1394522 1395544 . - . ID=gene-NYQ15_RS07295;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=NYQ15_RS07295 NZ_CP103431.1 Protein Homology CDS 1394522 1395544 . - 0 ID=cds-WP_005769061.1;Parent=gene-NYQ15_RS07295;Dbxref=GenBank:WP_005769061.1;Name=WP_005769061.1;Ontology_term=GO:0016020;gbkey=CDS;gene=nuoH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820424.1;locus_tag=NYQ15_RS07295;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_005769061.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1395544 1397907 . - . ID=gene-NYQ15_RS07300;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=NYQ15_RS07300 NZ_CP103431.1 Protein Homology CDS 1395544 1397907 . - 0 ID=cds-WP_259430931.1;Parent=gene-NYQ15_RS07300;Dbxref=GenBank:WP_259430931.1;Name=WP_259430931.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820425.1;locus_tag=NYQ15_RS07300;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_259430931.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1398018 1399286 . - . ID=gene-NYQ15_RS07305;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=NYQ15_RS07305 NZ_CP103431.1 Protein Homology CDS 1398018 1399286 . - 0 ID=cds-WP_098953215.1;Parent=gene-NYQ15_RS07305;Dbxref=GenBank:WP_098953215.1;Name=WP_098953215.1;Ontology_term=GO:0010181,GO:0050136,GO:0051287,GO:0051539;gbkey=CDS;gene=nuoF;go_function=FMN binding|0010181||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820426.1;locus_tag=NYQ15_RS07305;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_098953215.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1399276 1399800 . - . ID=gene-NYQ15_RS07310;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=NYQ15_RS07310 NZ_CP103431.1 Protein Homology CDS 1399276 1399800 . - 0 ID=cds-WP_005769068.1;Parent=gene-NYQ15_RS07310;Dbxref=GenBank:WP_005769068.1;Name=WP_005769068.1;gbkey=CDS;gene=nuoE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820427.1;locus_tag=NYQ15_RS07310;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_005769068.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1399800 1401074 . - . ID=gene-NYQ15_RS07315;Name=NYQ15_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07315 NZ_CP103431.1 Protein Homology CDS 1399800 1401074 . - 0 ID=cds-WP_077019572.1;Parent=gene-NYQ15_RS07315;Dbxref=GenBank:WP_077019572.1;Name=WP_077019572.1;Ontology_term=GO:0016651,GO:0048038,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,quinone binding|0048038||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820428.2;locus_tag=NYQ15_RS07315;product=NADH-quinone oxidoreductase subunit D;protein_id=WP_077019572.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1401046 1401729 . - . ID=gene-NYQ15_RS07320;Name=NYQ15_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07320 NZ_CP103431.1 Protein Homology CDS 1401046 1401729 . - 0 ID=cds-WP_259411657.1;Parent=gene-NYQ15_RS07320;Dbxref=GenBank:WP_259411657.1;Name=WP_259411657.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820429.1;locus_tag=NYQ15_RS07320;product=NADH-quinone oxidoreductase subunit C;protein_id=WP_259411657.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1401739 1402224 . - . ID=gene-NYQ15_RS07325;Name=NYQ15_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07325 NZ_CP103431.1 Protein Homology CDS 1401739 1402224 . - 0 ID=cds-WP_005769074.1;Parent=gene-NYQ15_RS07325;Dbxref=GenBank:WP_005769074.1;Name=WP_005769074.1;Ontology_term=GO:0008137,GO:0048038,GO:0051539,GO:0045271;gbkey=CDS;go_component=respiratory chain complex I|0045271||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,quinone binding|0048038||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820430.1;locus_tag=NYQ15_RS07325;product=NADH-quinone oxidoreductase subunit B family protein;protein_id=WP_005769074.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1402229 1402591 . - . ID=gene-NYQ15_RS07330;Name=NYQ15_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07330 NZ_CP103431.1 Protein Homology CDS 1402229 1402591 . - 0 ID=cds-WP_010958235.1;Parent=gene-NYQ15_RS07330;Dbxref=GenBank:WP_010958235.1;Name=WP_010958235.1;Ontology_term=GO:0016655,GO:0048038,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820431.2;locus_tag=NYQ15_RS07330;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_010958235.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1402791 1402872 . - . ID=gene-NYQ15_RS07335;Name=NYQ15_RS07335;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS07335 NZ_CP103431.1 tRNAscan-SE tRNA 1402791 1402872 . - . ID=rna-NYQ15_RS07335;Parent=gene-NYQ15_RS07335;anticodon=(pos:complement(1402836..1402838));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS07335;product=tRNA-Leu NZ_CP103431.1 tRNAscan-SE exon 1402791 1402872 . - . ID=exon-NYQ15_RS07335-1;Parent=rna-NYQ15_RS07335;anticodon=(pos:complement(1402836..1402838));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS07335;product=tRNA-Leu NZ_CP103431.1 RefSeq gene 1402882 1403178 . - . ID=gene-NYQ15_RS07340;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=NYQ15_RS07340 NZ_CP103431.1 Protein Homology CDS 1402882 1403178 . - 0 ID=cds-WP_005769079.1;Parent=gene-NYQ15_RS07340;Dbxref=GenBank:WP_005769079.1;Name=WP_005769079.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820432.1;locus_tag=NYQ15_RS07340;product=preprotein translocase subunit SecG;protein_id=WP_005769079.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1403160 1403927 . - . ID=gene-NYQ15_RS07345;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=NYQ15_RS07345 NZ_CP103431.1 Protein Homology CDS 1403160 1403927 . - 0 ID=cds-WP_005769081.1;Parent=gene-NYQ15_RS07345;Dbxref=GenBank:WP_005769081.1;Name=WP_005769081.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769081.1;locus_tag=NYQ15_RS07345;product=triose-phosphate isomerase;protein_id=WP_005769081.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1404779 1406347 . - . ID=gene-NYQ15_RS07355;Name=NYQ15_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07355 NZ_CP103431.1 Protein Homology CDS 1404779 1406347 . - 0 ID=cds-WP_005772707.1;Parent=gene-NYQ15_RS07355;Dbxref=GenBank:WP_005772707.1;Name=WP_005772707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820434.1;locus_tag=NYQ15_RS07355;product=SurA N-terminal domain-containing protein;protein_id=WP_005772707.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1406475 1406963 . - . ID=gene-NYQ15_RS07360;Name=NYQ15_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07360 NZ_CP103431.1 GeneMarkS-2+ CDS 1406475 1406963 . - 0 ID=cds-WP_259411658.1;Parent=gene-NYQ15_RS07360;Dbxref=GenBank:WP_259411658.1;Name=WP_259411658.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS07360;product=hypothetical protein;protein_id=WP_259411658.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1406941 1407279 . - . ID=gene-NYQ15_RS07365;Name=NYQ15_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07365 NZ_CP103431.1 GeneMarkS-2+ CDS 1406941 1407279 . - 0 ID=cds-WP_259430933.1;Parent=gene-NYQ15_RS07365;Dbxref=GenBank:WP_259430933.1;Name=WP_259430933.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS07365;product=hypothetical protein;protein_id=WP_259430933.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1407357 1409027 . - . ID=gene-NYQ15_RS07370;Name=NYQ15_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07370 NZ_CP103431.1 GeneMarkS-2+ CDS 1407357 1409027 . - 0 ID=cds-WP_259430934.1;Parent=gene-NYQ15_RS07370;Dbxref=GenBank:WP_259430934.1;Name=WP_259430934.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS07370;product=hypothetical protein;protein_id=WP_259430934.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1409265 1409909 . - . ID=gene-NYQ15_RS07375;Name=NYQ15_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07375 NZ_CP103431.1 GeneMarkS-2+ CDS 1409265 1409909 . - 0 ID=cds-WP_259430935.1;Parent=gene-NYQ15_RS07375;Dbxref=GenBank:WP_259430935.1;Name=WP_259430935.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS07375;product=hypothetical protein;protein_id=WP_259430935.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1410044 1410931 . - . ID=gene-NYQ15_RS07380;Name=NYQ15_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07380 NZ_CP103431.1 GeneMarkS-2+ CDS 1410044 1410931 . - 0 ID=cds-WP_259430936.1;Parent=gene-NYQ15_RS07380;Dbxref=GenBank:WP_259430936.1;Name=WP_259430936.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS07380;product=hypothetical protein;protein_id=WP_259430936.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1411074 1411143 . - . ID=gene-NYQ15_RS07385;Name=NYQ15_RS07385;end_range=1411143,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07385;partial=true NZ_CP103431.1 Protein Homology CDS 1411074 1411143 . - 1 ID=cds-WP_259411923.1;Parent=gene-NYQ15_RS07385;Dbxref=GenBank:WP_259411923.1;Name=WP_259411923.1;end_range=1411143,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820440.2;locus_tag=NYQ15_RS07385;partial=true;product=hypothetical protein;protein_id=WP_259411923.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1411165 1413098 . - . ID=gene-NYQ15_RS07390;Name=coxTRP1;gbkey=Gene;gene=coxTRP1;gene_biotype=pseudogene;locus_tag=NYQ15_RS07390;partial=true;pseudo=true;start_range=.,1411165 NZ_CP103431.1 Protein Homology CDS 1411165 1413098 . - 0 ID=cds-NYQ15_RS07390;Parent=gene-NYQ15_RS07390;Note=internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;gene=coxTRP1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820440.2;locus_tag=NYQ15_RS07390;partial=true;product=Dot/Icm type IV secretion system effector CoxTRP1;pseudo=true;start_range=.,1411165;transl_table=11 NZ_CP103431.1 RefSeq gene 1413282 1414442 . + . ID=gene-NYQ15_RS07395;Name=NYQ15_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07395 NZ_CP103431.1 Protein Homology CDS 1413282 1414442 . + 0 ID=cds-WP_080592769.1;Parent=gene-NYQ15_RS07395;Dbxref=GenBank:WP_080592769.1;Name=WP_080592769.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820441.1;locus_tag=NYQ15_RS07395;product=ATP-binding protein;protein_id=WP_080592769.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1414565 1414711 . - . ID=gene-NYQ15_RS07400;Name=NYQ15_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07400 NZ_CP103431.1 Protein Homology CDS 1414565 1414711 . - 0 ID=cds-WP_005771989.1;Parent=gene-NYQ15_RS07400;Dbxref=GenBank:WP_005771989.1;Name=WP_005771989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002333007.1;locus_tag=NYQ15_RS07400;product=hypothetical protein;protein_id=WP_005771989.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1414809 1415141 . + . ID=gene-NYQ15_RS07405;Name=NYQ15_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07405 NZ_CP103431.1 Protein Homology CDS 1414809 1415141 . + 0 ID=cds-WP_259430938.1;Parent=gene-NYQ15_RS07405;Dbxref=GenBank:WP_259430938.1;Name=WP_259430938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820442.1;locus_tag=NYQ15_RS07405;product=hypothetical protein;protein_id=WP_259430938.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1415237 1416025 . - . ID=gene-NYQ15_RS07410;Name=coxCC7;gbkey=Gene;gene=coxCC7;gene_biotype=pseudogene;locus_tag=NYQ15_RS07410;pseudo=true NZ_CP103431.1 Protein Homology CDS 1415237 1416025 . - 0 ID=cds-NYQ15_RS07410;Parent=gene-NYQ15_RS07410;Note=internal stop;gbkey=CDS;gene=coxCC7;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820443.1;locus_tag=NYQ15_RS07410;product=Dot/Icm T4SS effector CoxCC7;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1416531 1418801 . - . ID=gene-NYQ15_RS07415;Name=coxCC8;gbkey=Gene;gene=coxCC8;gene_biotype=protein_coding;locus_tag=NYQ15_RS07415 NZ_CP103431.1 Protein Homology CDS 1416531 1418801 . - 0 ID=cds-WP_005771993.1;Parent=gene-NYQ15_RS07415;Dbxref=GenBank:WP_005771993.1;Name=WP_005771993.1;gbkey=CDS;gene=coxCC8;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771993.1;locus_tag=NYQ15_RS07415;product=Dot/Icm T4SS effector CoxCC8;protein_id=WP_005771993.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1419081 1419157 . - . ID=gene-NYQ15_RS07425;Name=NYQ15_RS07425;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS07425 NZ_CP103431.1 tRNAscan-SE tRNA 1419081 1419157 . - . ID=rna-NYQ15_RS07425;Parent=gene-NYQ15_RS07425;anticodon=(pos:complement(1419121..1419123));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS07425;product=tRNA-Asp NZ_CP103431.1 tRNAscan-SE exon 1419081 1419157 . - . ID=exon-NYQ15_RS07425-1;Parent=rna-NYQ15_RS07425;anticodon=(pos:complement(1419121..1419123));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS07425;product=tRNA-Asp NZ_CP103431.1 RefSeq gene 1419260 1419332 . - . ID=gene-NYQ15_RS07430;Name=NYQ15_RS07430;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS07430 NZ_CP103431.1 tRNAscan-SE tRNA 1419260 1419332 . - . ID=rna-NYQ15_RS07430;Parent=gene-NYQ15_RS07430;anticodon=(pos:complement(1419297..1419299));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS07430;product=tRNA-Val NZ_CP103431.1 tRNAscan-SE exon 1419260 1419332 . - . ID=exon-NYQ15_RS07430-1;Parent=rna-NYQ15_RS07430;anticodon=(pos:complement(1419297..1419299));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS07430;product=tRNA-Val NZ_CP103431.1 RefSeq gene 1419370 1419567 . - . ID=gene-NYQ15_RS07435;Name=NYQ15_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07435 NZ_CP103431.1 Protein Homology CDS 1419370 1419567 . - 0 ID=cds-WP_010958243.1;Parent=gene-NYQ15_RS07435;Dbxref=GenBank:WP_010958243.1;Name=WP_010958243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820446.1;locus_tag=NYQ15_RS07435;product=hypothetical protein;protein_id=WP_010958243.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1419570 1419854 . - . ID=gene-NYQ15_RS07440;Name=NYQ15_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07440 NZ_CP103431.1 Protein Homology CDS 1419570 1419854 . - 0 ID=cds-WP_005772706.1;Parent=gene-NYQ15_RS07440;Dbxref=GenBank:WP_005772706.1;Name=WP_005772706.1;Ontology_term=GO:0030261,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820447.1;locus_tag=NYQ15_RS07440;product=HU family DNA-binding protein;protein_id=WP_005772706.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1420159 1420617 . + . ID=gene-NYQ15_RS07445;Name=NYQ15_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07445 NZ_CP103431.1 Protein Homology CDS 1420159 1420617 . + 0 ID=cds-WP_005771996.1;Parent=gene-NYQ15_RS07445;Dbxref=GenBank:WP_005771996.1;Name=WP_005771996.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820448.1;locus_tag=NYQ15_RS07445;product=EVE domain-containing protein;protein_id=WP_005771996.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1420623 1420964 . + . ID=gene-NYQ15_RS07450;Name=NYQ15_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07450 NZ_CP103431.1 Protein Homology CDS 1420623 1420964 . + 0 ID=cds-WP_005772705.1;Parent=gene-NYQ15_RS07450;Dbxref=GenBank:WP_005772705.1;Name=WP_005772705.1;Ontology_term=GO:0004497;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820449.1;locus_tag=NYQ15_RS07450;product=antibiotic biosynthesis monooxygenase;protein_id=WP_005772705.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1420941 1422374 . - . ID=gene-NYQ15_RS07455;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=NYQ15_RS07455 NZ_CP103431.1 Protein Homology CDS 1420941 1422374 . - 0 ID=cds-WP_040070886.1;Parent=gene-NYQ15_RS07455;Dbxref=GenBank:WP_040070886.1;Name=WP_040070886.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820450.1;locus_tag=NYQ15_RS07455;product=metalloprotease TldD;protein_id=WP_040070886.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1422445 1425906 . - . ID=gene-NYQ15_RS07460;Name=NYQ15_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07460 NZ_CP103431.1 Protein Homology CDS 1422445 1425906 . - 0 ID=cds-WP_005771999.1;Parent=gene-NYQ15_RS07460;Dbxref=GenBank:WP_005771999.1;Name=WP_005771999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820451.2;locus_tag=NYQ15_RS07460;product=YhdP family protein;protein_id=WP_005771999.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1425906 1426394 . - . ID=gene-NYQ15_RS07465;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=NYQ15_RS07465 NZ_CP103431.1 Protein Homology CDS 1425906 1426394 . - 0 ID=cds-WP_005772000.1;Parent=gene-NYQ15_RS07465;Dbxref=GenBank:WP_005772000.1;Name=WP_005772000.1;Ontology_term=GO:0008360,GO:0016020;gbkey=CDS;gene=mreD;go_component=membrane|0016020||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820452.1;locus_tag=NYQ15_RS07465;product=rod shape-determining protein MreD;protein_id=WP_005772000.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1426400 1427278 . - . ID=gene-NYQ15_RS07470;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=NYQ15_RS07470 NZ_CP103431.1 Protein Homology CDS 1426400 1427278 . - 0 ID=cds-WP_005773001.1;Parent=gene-NYQ15_RS07470;Dbxref=GenBank:WP_005773001.1;Name=WP_005773001.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820453.1;locus_tag=NYQ15_RS07470;product=rod shape-determining protein MreC;protein_id=WP_005773001.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1427361 1428407 . - . ID=gene-NYQ15_RS07475;Name=NYQ15_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07475 NZ_CP103431.1 Protein Homology CDS 1427361 1428407 . - 0 ID=cds-WP_026051278.1;Parent=gene-NYQ15_RS07475;Dbxref=GenBank:WP_026051278.1;Name=WP_026051278.1;Ontology_term=GO:0000902,GO:0008360,GO:0005524,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA;go_process=cell morphogenesis|0000902||IEA,regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820454.2;locus_tag=NYQ15_RS07475;product=rod shape-determining protein;protein_id=WP_026051278.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1428621 1428821 . + . ID=gene-NYQ15_RS07480;Name=NYQ15_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07480 NZ_CP103431.1 Protein Homology CDS 1428621 1428821 . + 0 ID=cds-WP_259411662.1;Parent=gene-NYQ15_RS07480;Dbxref=GenBank:WP_259411662.1;Name=WP_259411662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820455.1;locus_tag=NYQ15_RS07480;product=hypothetical protein;protein_id=WP_259411662.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1428969 1429268 . + . ID=gene-NYQ15_RS07485;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=NYQ15_RS07485 NZ_CP103431.1 Protein Homology CDS 1428969 1429268 . + 0 ID=cds-WP_005772004.1;Parent=gene-NYQ15_RS07485;Dbxref=GenBank:WP_005772004.1;Name=WP_005772004.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820456.1;locus_tag=NYQ15_RS07485;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_005772004.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1429272 1430723 . + . ID=gene-NYQ15_RS07490;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=NYQ15_RS07490 NZ_CP103431.1 Protein Homology CDS 1429272 1430723 . + 0 ID=cds-WP_005772005.1;Parent=gene-NYQ15_RS07490;Dbxref=GenBank:WP_005772005.1;Name=WP_005772005.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820457.1;locus_tag=NYQ15_RS07490;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_005772005.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1430728 1432161 . + . ID=gene-NYQ15_RS07495;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=NYQ15_RS07495 NZ_CP103431.1 Protein Homology CDS 1430728 1432161 . + 0 ID=cds-WP_005772006.1;Parent=gene-NYQ15_RS07495;Dbxref=GenBank:WP_005772006.1;Name=WP_005772006.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820458.1;locus_tag=NYQ15_RS07495;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_005772006.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1432195 1432299 . - . ID=gene-NYQ15_RS07500;Name=NYQ15_RS07500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS07500;partial=true;pseudo=true;start_range=.,1432195 NZ_CP103431.1 Protein Homology CDS 1432195 1432299 . - 0 ID=cds-NYQ15_RS07500;Parent=gene-NYQ15_RS07500;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332956.1;locus_tag=NYQ15_RS07500;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1432195;transl_table=11 NZ_CP103431.1 RefSeq gene 1432305 1433240 . - . ID=gene-NYQ15_RS07505;Name=NYQ15_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07505 NZ_CP103431.1 Protein Homology CDS 1432305 1433240 . - 0 ID=cds-WP_011996608.1;Parent=gene-NYQ15_RS07505;Dbxref=GenBank:WP_011996608.1;Name=WP_011996608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820459.1;locus_tag=NYQ15_RS07505;product=LysR substrate-binding domain-containing protein;protein_id=WP_011996608.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1433368 1433907 . + . ID=gene-NYQ15_RS07510;Name=NYQ15_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07510 NZ_CP103431.1 Protein Homology CDS 1433368 1433907 . + 0 ID=cds-WP_005772008.1;Parent=gene-NYQ15_RS07510;Dbxref=GenBank:WP_005772008.1;Name=WP_005772008.1;Ontology_term=GO:0008379;gbkey=CDS;go_function=thioredoxin peroxidase activity|0008379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820460.1;locus_tag=NYQ15_RS07510;product=peroxiredoxin;protein_id=WP_005772008.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1434009 1434542 . + . ID=gene-NYQ15_RS07515;Name=NYQ15_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07515 NZ_CP103431.1 Protein Homology CDS 1434009 1434542 . + 0 ID=cds-WP_032075161.1;Parent=gene-NYQ15_RS07515;Dbxref=GenBank:WP_032075161.1;Name=WP_032075161.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220673.1;locus_tag=NYQ15_RS07515;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_032075161.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1434571 1434963 . - . ID=gene-NYQ15_RS07520;Name=NYQ15_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07520 NZ_CP103431.1 Protein Homology CDS 1434571 1434963 . - 0 ID=cds-WP_012570875.1;Parent=gene-NYQ15_RS07520;Dbxref=GenBank:WP_012570875.1;Name=WP_012570875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820462.2;locus_tag=NYQ15_RS07520;product=PilX N-terminal domain-containing pilus assembly protein;protein_id=WP_012570875.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1434987 1435637 . - . ID=gene-NYQ15_RS07525;Name=NYQ15_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07525 NZ_CP103431.1 Protein Homology CDS 1434987 1435637 . - 0 ID=cds-WP_259411663.1;Parent=gene-NYQ15_RS07525;Dbxref=GenBank:WP_259411663.1;Name=WP_259411663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820463.1;locus_tag=NYQ15_RS07525;product=PilW family protein;protein_id=WP_259411663.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1435634 1435987 . - . ID=gene-NYQ15_RS07530;Name=NYQ15_RS07530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS07530;pseudo=true NZ_CP103431.1 Protein Homology CDS 1435634 1435987 . - 0 ID=cds-NYQ15_RS07530;Parent=gene-NYQ15_RS07530;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820464.1;locus_tag=NYQ15_RS07530;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1436062 1436130 . - . ID=gene-NYQ15_RS07535;Name=NYQ15_RS07535;end_range=1436130,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS07535;partial=true;pseudo=true;start_range=.,1436062 NZ_CP103431.1 Protein Homology CDS 1436062 1436130 . - 0 ID=cds-NYQ15_RS07535;Parent=gene-NYQ15_RS07535;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1436130,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002332956.1;locus_tag=NYQ15_RS07535;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1436062;transl_table=11 NZ_CP103431.1 RefSeq gene 1436208 1436957 . - . ID=gene-NYQ15_RS07540;Name=NYQ15_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07540 NZ_CP103431.1 Protein Homology CDS 1436208 1436957 . - 0 ID=cds-WP_010958256.1;Parent=gene-NYQ15_RS07540;Dbxref=GenBank:WP_010958256.1;Name=WP_010958256.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820465.1;locus_tag=NYQ15_RS07540;product=slipin family protein;protein_id=WP_010958256.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1436957 1438333 . - . ID=gene-NYQ15_RS07545;Name=NYQ15_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07545 NZ_CP103431.1 Protein Homology CDS 1436957 1438333 . - 0 ID=cds-WP_005772017.1;Parent=gene-NYQ15_RS07545;Dbxref=GenBank:WP_005772017.1;Name=WP_005772017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820466.1;locus_tag=NYQ15_RS07545;product=nodulation protein NfeD;protein_id=WP_005772017.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1438423 1439709 . + . ID=gene-NYQ15_RS07550;Name=NYQ15_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07550 NZ_CP103431.1 Protein Homology CDS 1438423 1439709 . + 0 ID=cds-WP_005772018.1;Parent=gene-NYQ15_RS07550;Dbxref=GenBank:WP_005772018.1;Name=WP_005772018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820467.1;locus_tag=NYQ15_RS07550;product=MFS transporter;protein_id=WP_005772018.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1439706 1440384 . - . ID=gene-NYQ15_RS07555;Name=NYQ15_RS07555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS07555;pseudo=true NZ_CP103431.1 Protein Homology CDS 1439706 1440384 . - 0 ID=cds-NYQ15_RS07555;Parent=gene-NYQ15_RS07555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820468.2;locus_tag=NYQ15_RS07555;product=cyclin family putative virulence effector;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1440703 1442085 . - . ID=gene-NYQ15_RS07560;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=NYQ15_RS07560 NZ_CP103431.1 Protein Homology CDS 1440703 1442085 . - 0 ID=cds-WP_010958260.1;Parent=gene-NYQ15_RS07560;Dbxref=GenBank:WP_010958260.1;Name=WP_010958260.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820470.2;locus_tag=NYQ15_RS07560;product=cysteine--tRNA ligase;protein_id=WP_010958260.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1442076 1443473 . - . ID=gene-NYQ15_RS07565;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=NYQ15_RS07565 NZ_CP103431.1 Protein Homology CDS 1442076 1443473 . - 0 ID=cds-WP_005772712.1;Parent=gene-NYQ15_RS07565;Dbxref=GenBank:WP_005772712.1;Name=WP_005772712.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820471.2;locus_tag=NYQ15_RS07565;product=glutamate--tRNA ligase;protein_id=WP_005772712.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1443630 1444361 . + . ID=gene-NYQ15_RS07570;Name=NYQ15_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07570 NZ_CP103431.1 Protein Homology CDS 1443630 1444361 . + 0 ID=cds-WP_005772711.1;Parent=gene-NYQ15_RS07570;Dbxref=GenBank:WP_005772711.1;Name=WP_005772711.1;Ontology_term=GO:0009245,GO:0016462;gbkey=CDS;go_function=pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820472.1;locus_tag=NYQ15_RS07570;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_005772711.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1444431 1444742 . - . ID=gene-NYQ15_RS07575;Name=NYQ15_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07575 NZ_CP103431.1 Protein Homology CDS 1444431 1444742 . - 0 ID=cds-WP_259430939.1;Parent=gene-NYQ15_RS07575;Dbxref=GenBank:WP_259430939.1;Name=WP_259430939.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820473.2;locus_tag=NYQ15_RS07575;product=HigA family addiction module antitoxin;protein_id=WP_259430939.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1444748 1445086 . - . ID=gene-NYQ15_RS07580;Name=NYQ15_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07580 NZ_CP103431.1 Protein Homology CDS 1444748 1445086 . - 0 ID=cds-WP_011996617.1;Parent=gene-NYQ15_RS07580;Dbxref=GenBank:WP_011996617.1;Name=WP_011996617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820474.2;locus_tag=NYQ15_RS07580;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_011996617.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1446524 1446590 . + . ID=gene-NYQ15_RS07585;Name=NYQ15_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07585;partial=true;start_range=.,1446524 NZ_CP103431.1 Protein Homology CDS 1446524 1446590 . + 1 ID=cds-WP_259411917.1-2;Parent=gene-NYQ15_RS07585;Dbxref=GenBank:WP_259411917.1;Name=WP_259411917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771875.1;locus_tag=NYQ15_RS07585;partial=true;product=hypothetical protein;protein_id=WP_259411917.1;start_range=.,1446524;transl_table=11 NZ_CP103431.1 RefSeq gene 1446918 1448591 . + . ID=gene-NYQ15_RS07590;Name=NYQ15_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07590 NZ_CP103431.1 Protein Homology CDS 1446918 1448591 . + 0 ID=cds-WP_098953166.1;Parent=gene-NYQ15_RS07590;Dbxref=GenBank:WP_098953166.1;Name=WP_098953166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820476.2;locus_tag=NYQ15_RS07590;product=CBU_1493 family Dot/Icm T4SS effector;protein_id=WP_098953166.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1448765 1449520 . - . ID=gene-NYQ15_RS07595;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=NYQ15_RS07595 NZ_CP103431.1 Protein Homology CDS 1448765 1449520 . - 0 ID=cds-WP_010958266.1;Parent=gene-NYQ15_RS07595;Dbxref=GenBank:WP_010958266.1;Name=WP_010958266.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820477.2;locus_tag=NYQ15_RS07595;product=pyridoxine 5'-phosphate synthase;protein_id=WP_010958266.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1449568 1451935 . - . ID=gene-NYQ15_RS07600;Name=NYQ15_RS07600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS07600;pseudo=true NZ_CP103431.1 Protein Homology CDS 1449568 1451935 . - 0 ID=cds-NYQ15_RS07600;Parent=gene-NYQ15_RS07600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996596.1;locus_tag=NYQ15_RS07600;product=CBUD_0487 family Dot/Icm T4SS effector;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1451932 1452063 . - . ID=gene-NYQ15_RS07605;Name=NYQ15_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07605 NZ_CP103431.1 Protein Homology CDS 1451932 1452063 . - 0 ID=cds-WP_005772029.1;Parent=gene-NYQ15_RS07605;Dbxref=GenBank:WP_005772029.1;Name=WP_005772029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820480.1;locus_tag=NYQ15_RS07605;product=hypothetical protein;protein_id=WP_005772029.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1452060 1453229 . - . ID=gene-NYQ15_RS07610;Name=NYQ15_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07610 NZ_CP103431.1 Protein Homology CDS 1452060 1453229 . - 0 ID=cds-WP_098953168.1;Parent=gene-NYQ15_RS07610;Dbxref=GenBank:WP_098953168.1;Name=WP_098953168.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570877.1;locus_tag=NYQ15_RS07610;product=ATP-binding protein;protein_id=WP_098953168.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1453407 1454102 . - . ID=gene-NYQ15_RS07615;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=NYQ15_RS07615 NZ_CP103431.1 Protein Homology CDS 1453407 1454102 . - 0 ID=cds-WP_005772032.1;Parent=gene-NYQ15_RS07615;Dbxref=GenBank:WP_005772032.1;Name=WP_005772032.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820484.1;locus_tag=NYQ15_RS07615;product=DNA repair protein RecO;protein_id=WP_005772032.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1454099 1454986 . - . ID=gene-NYQ15_RS07620;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=NYQ15_RS07620 NZ_CP103431.1 Protein Homology CDS 1454099 1454986 . - 0 ID=cds-WP_005772033.1;Parent=gene-NYQ15_RS07620;Dbxref=GenBank:WP_005772033.1;Name=WP_005772033.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820485.1;locus_tag=NYQ15_RS07620;product=GTPase Era;protein_id=WP_005772033.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1454983 1455684 . - . ID=gene-NYQ15_RS07625;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=NYQ15_RS07625 NZ_CP103431.1 Protein Homology CDS 1454983 1455684 . - 0 ID=cds-WP_259430940.1;Parent=gene-NYQ15_RS07625;Dbxref=GenBank:WP_259430940.1;Name=WP_259430940.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820486.1;locus_tag=NYQ15_RS07625;product=ribonuclease III;protein_id=WP_259430940.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1455705 1456475 . - . ID=gene-NYQ15_RS07630;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=NYQ15_RS07630 NZ_CP103431.1 Protein Homology CDS 1455705 1456475 . - 0 ID=cds-WP_005772035.1;Parent=gene-NYQ15_RS07630;Dbxref=GenBank:WP_005772035.1;Name=WP_005772035.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820487.1;locus_tag=NYQ15_RS07630;product=signal peptidase I;protein_id=WP_005772035.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1456472 1458316 . - . ID=gene-NYQ15_RS07635;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=NYQ15_RS07635 NZ_CP103431.1 Protein Homology CDS 1456472 1458316 . - 0 ID=cds-WP_012569797.1;Parent=gene-NYQ15_RS07635;Dbxref=GenBank:WP_012569797.1;Name=WP_012569797.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820488.1;locus_tag=NYQ15_RS07635;product=translation elongation factor 4;protein_id=WP_012569797.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1458452 1458889 . - . ID=gene-NYQ15_RS07640;Name=NYQ15_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07640 NZ_CP103431.1 Protein Homology CDS 1458452 1458889 . - 0 ID=cds-WP_005772037.1;Parent=gene-NYQ15_RS07640;Dbxref=GenBank:WP_005772037.1;Name=WP_005772037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820489.1;locus_tag=NYQ15_RS07640;product=thioesterase family protein;protein_id=WP_005772037.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1458906 1461135 . - . ID=gene-NYQ15_RS07645;Name=NYQ15_RS07645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS07645;pseudo=true NZ_CP103431.1 Protein Homology CDS 1458906 1461135 . - 0 ID=cds-NYQ15_RS07645;Parent=gene-NYQ15_RS07645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820490.1;locus_tag=NYQ15_RS07645;product=heavy metal translocating P-type ATPase;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1461158 1462789 . - . ID=gene-NYQ15_RS07650;Name=NYQ15_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07650 NZ_CP103431.1 Protein Homology CDS 1461158 1462789 . - 0 ID=cds-WP_005772038.1;Parent=gene-NYQ15_RS07650;Dbxref=GenBank:WP_005772038.1;Name=WP_005772038.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820491.1;locus_tag=NYQ15_RS07650;product=ATP-binding protein;protein_id=WP_005772038.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1462867 1464216 . - . ID=gene-NYQ15_RS07655;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=NYQ15_RS07655 NZ_CP103431.1 Protein Homology CDS 1462867 1464216 . - 0 ID=cds-WP_005772040.1;Parent=gene-NYQ15_RS07655;Dbxref=GenBank:WP_005772040.1;Name=WP_005772040.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820492.1;locus_tag=NYQ15_RS07655;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_005772040.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1464192 1465142 . - . ID=gene-NYQ15_RS07660;Name=NYQ15_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07660 NZ_CP103431.1 Protein Homology CDS 1464192 1465142 . - 0 ID=cds-WP_005772042.1;Parent=gene-NYQ15_RS07660;Dbxref=GenBank:WP_005772042.1;Name=WP_005772042.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820493.1;locus_tag=NYQ15_RS07660;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_005772042.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1465291 1466076 . + . ID=gene-NYQ15_RS07665;Name=NYQ15_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07665 NZ_CP103431.1 Protein Homology CDS 1465291 1466076 . + 0 ID=cds-WP_005772043.1;Parent=gene-NYQ15_RS07665;Dbxref=GenBank:WP_005772043.1;Name=WP_005772043.1;Ontology_term=GO:0030001,GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820494.1;locus_tag=NYQ15_RS07665;product=ZIP family metal transporter;protein_id=WP_005772043.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1466073 1466786 . - . ID=gene-NYQ15_RS07670;Name=NYQ15_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07670 NZ_CP103431.1 Protein Homology CDS 1466073 1466786 . - 0 ID=cds-WP_005772044.1;Parent=gene-NYQ15_RS07670;Dbxref=GenBank:WP_005772044.1;Name=WP_005772044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820495.1;locus_tag=NYQ15_RS07670;product=rhodanese-like domain-containing protein;protein_id=WP_005772044.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1466790 1467566 . - . ID=gene-NYQ15_RS07675;Name=NYQ15_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07675 NZ_CP103431.1 Protein Homology CDS 1466790 1467566 . - 0 ID=cds-WP_259430941.1;Parent=gene-NYQ15_RS07675;Dbxref=GenBank:WP_259430941.1;Name=WP_259430941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820496.1;locus_tag=NYQ15_RS07675;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_259430941.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1467615 1468379 . + . ID=gene-NYQ15_RS07680;Name=NYQ15_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07680 NZ_CP103431.1 Protein Homology CDS 1467615 1468379 . + 0 ID=cds-WP_052367327.1;Parent=gene-NYQ15_RS07680;Dbxref=GenBank:WP_052367327.1;Name=WP_052367327.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996590.1;locus_tag=NYQ15_RS07680;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_052367327.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1468383 1468601 . + . ID=gene-NYQ15_RS07685;Name=NYQ15_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07685 NZ_CP103431.1 Protein Homology CDS 1468383 1468601 . + 0 ID=cds-WP_005772046.1;Parent=gene-NYQ15_RS07685;Dbxref=GenBank:WP_005772046.1;Name=WP_005772046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820498.1;locus_tag=NYQ15_RS07685;product=hypothetical protein;protein_id=WP_005772046.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1468765 1469013 . + . ID=gene-NYQ15_RS07690;Name=NYQ15_RS07690;end_range=1469013,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS07690;partial=true;pseudo=true NZ_CP103431.1 Protein Homology CDS 1468765 1469013 . + 0 ID=cds-NYQ15_RS07690;Parent=gene-NYQ15_RS07690;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1469013,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820499.1;locus_tag=NYQ15_RS07690;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1469306 1469764 . + . ID=gene-NYQ15_RS07695;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=NYQ15_RS07695 NZ_CP103431.1 Protein Homology CDS 1469306 1469764 . + 0 ID=cds-WP_005772048.1;Parent=gene-NYQ15_RS07695;Dbxref=GenBank:WP_005772048.1;Name=WP_005772048.1;Ontology_term=GO:0006400,GO:0008175;gbkey=CDS;gene=trmL;go_function=tRNA methyltransferase activity|0008175||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820500.1;locus_tag=NYQ15_RS07695;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_005772048.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1469792 1470790 . - . ID=gene-NYQ15_RS07700;Name=NYQ15_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07700 NZ_CP103431.1 Protein Homology CDS 1469792 1470790 . - 0 ID=cds-WP_005772682.1;Parent=gene-NYQ15_RS07700;Dbxref=GenBank:WP_005772682.1;Name=WP_005772682.1;Ontology_term=GO:0046167,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate biosynthetic process|0046167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820501.1;locus_tag=NYQ15_RS07700;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_005772682.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1470859 1471344 . - . ID=gene-NYQ15_RS07705;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=NYQ15_RS07705 NZ_CP103431.1 Protein Homology CDS 1470859 1471344 . - 0 ID=cds-WP_005772050.1;Parent=gene-NYQ15_RS07705;Dbxref=GenBank:WP_005772050.1;Name=WP_005772050.1;Ontology_term=GO:0015031,GO:0051262,GO:0051082;gbkey=CDS;gene=secB;go_function=unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,protein tetramerization|0051262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820502.1;locus_tag=NYQ15_RS07705;product=protein-export chaperone SecB;protein_id=WP_005772050.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1471357 1471614 . - . ID=gene-NYQ15_RS07710;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=NYQ15_RS07710 NZ_CP103431.1 Protein Homology CDS 1471357 1471614 . - 0 ID=cds-WP_005772051.1;Parent=gene-NYQ15_RS07710;Dbxref=GenBank:WP_005772051.1;Name=WP_005772051.1;Ontology_term=GO:0045454;gbkey=CDS;gene=grxC;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820503.1;locus_tag=NYQ15_RS07710;product=glutaredoxin 3;protein_id=WP_005772051.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1471619 1472053 . - . ID=gene-NYQ15_RS07715;Name=NYQ15_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07715 NZ_CP103431.1 Protein Homology CDS 1471619 1472053 . - 0 ID=cds-WP_010958278.1;Parent=gene-NYQ15_RS07715;Dbxref=GenBank:WP_010958278.1;Name=WP_010958278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820504.1;locus_tag=NYQ15_RS07715;product=rhodanese-like domain-containing protein;protein_id=WP_010958278.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1472432 1472665 . + . ID=gene-NYQ15_RS07720;Name=NYQ15_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07720 NZ_CP103431.1 GeneMarkS-2+ CDS 1472432 1472665 . + 0 ID=cds-WP_040947956.1;Parent=gene-NYQ15_RS07720;Dbxref=GenBank:WP_040947956.1;Name=WP_040947956.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS07720;product=hypothetical protein;protein_id=WP_040947956.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1472778 1473437 . + . ID=gene-NYQ15_RS07725;Name=NYQ15_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07725 NZ_CP103431.1 Protein Homology CDS 1472778 1473437 . + 0 ID=cds-WP_040933696.1;Parent=gene-NYQ15_RS07725;Dbxref=GenBank:WP_040933696.1;Name=WP_040933696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569786.1;locus_tag=NYQ15_RS07725;product=hypothetical protein;protein_id=WP_040933696.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1473491 1476518 . - . ID=gene-NYQ15_RS07730;Name=NYQ15_RS07730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS07730;pseudo=true NZ_CP103431.1 Protein Homology CDS 1473491 1476518 . - 0 ID=cds-NYQ15_RS07730;Parent=gene-NYQ15_RS07730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996586.1;locus_tag=NYQ15_RS07730;product=CBUD_0461 family Dot/Icm T4SS effector;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1476571 1476666 . - . ID=gene-NYQ15_RS07735;Name=NYQ15_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07735 NZ_CP103431.1 Protein Homology CDS 1476571 1476666 . - 0 ID=cds-WP_010958280.1;Parent=gene-NYQ15_RS07735;Dbxref=GenBank:WP_010958280.1;Name=WP_010958280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002333009.1;locus_tag=NYQ15_RS07735;product=hypothetical protein;protein_id=WP_010958280.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1476738 1478120 . + . ID=gene-NYQ15_RS07740;Name=NYQ15_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07740 NZ_CP103431.1 Protein Homology CDS 1476738 1478120 . + 0 ID=cds-WP_005772058.1;Parent=gene-NYQ15_RS07740;Dbxref=GenBank:WP_005772058.1;Name=WP_005772058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569785.1;locus_tag=NYQ15_RS07740;product=N-acetylmuramoyl-L-alanine amidase-like domain-containing protein;protein_id=WP_005772058.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1478292 1480202 . - . ID=gene-NYQ15_RS07745;Name=NYQ15_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07745 NZ_CP103431.1 Protein Homology CDS 1478292 1480202 . - 0 ID=cds-WP_032075174.1;Parent=gene-NYQ15_RS07745;Dbxref=GenBank:WP_032075174.1;Name=WP_032075174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820512.1;locus_tag=NYQ15_RS07745;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_032075174.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1480269 1482206 . - . ID=gene-NYQ15_RS07750;Name=NYQ15_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07750 NZ_CP103431.1 Protein Homology CDS 1480269 1482206 . - 0 ID=cds-WP_012570881.1;Parent=gene-NYQ15_RS07750;Dbxref=GenBank:WP_012570881.1;Name=WP_012570881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820513.1;locus_tag=NYQ15_RS07750;product=CBU_1530 family Dot/Icm T4SS effector;protein_id=WP_012570881.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1482302 1482543 . - . ID=gene-NYQ15_RS07755;Name=NYQ15_RS07755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS07755;pseudo=true NZ_CP103431.1 Protein Homology CDS 1482302 1482543 . - 0 ID=cds-NYQ15_RS07755;Parent=gene-NYQ15_RS07755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002333010.1;locus_tag=NYQ15_RS07755;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1482561 1483891 . + . ID=gene-NYQ15_RS07760;Name=caeB;gbkey=Gene;gene=caeB;gene_biotype=pseudogene;locus_tag=NYQ15_RS07760;pseudo=true NZ_CP103431.1 Protein Homology CDS 1482561 1483891 . + 0 ID=cds-NYQ15_RS07760;Parent=gene-NYQ15_RS07760;Note=frameshifted;gbkey=CDS;gene=caeB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996582.1;locus_tag=NYQ15_RS07760;product=Dot/Icm type IV secretion system anti-apoptotic effector CaeB;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1484204 1485889 . - . ID=gene-NYQ15_RS07765;Name=NYQ15_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07765 NZ_CP103431.1 GeneMarkS-2+ CDS 1484204 1485889 . - 0 ID=cds-WP_242438631.1;Parent=gene-NYQ15_RS07765;Dbxref=GenBank:WP_242438631.1;Name=WP_242438631.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS07765;product=hypothetical protein;protein_id=WP_242438631.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1486042 1487601 . + . ID=gene-NYQ15_RS07770;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;locus_tag=NYQ15_RS07770 NZ_CP103431.1 Protein Homology CDS 1486042 1487601 . + 0 ID=cds-WP_005772067.1;Parent=gene-NYQ15_RS07770;Dbxref=GenBank:WP_005772067.1;Name=WP_005772067.1;Ontology_term=GO:0006096,GO:0046537;gbkey=CDS;gene=gpmI;go_function=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase activity|0046537||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820519.1;locus_tag=NYQ15_RS07770;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_005772067.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1487605 1488846 . + . ID=gene-NYQ15_RS07775;Name=NYQ15_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07775 NZ_CP103431.1 Protein Homology CDS 1487605 1488846 . + 0 ID=cds-WP_010958285.1;Parent=gene-NYQ15_RS07775;Dbxref=GenBank:WP_010958285.1;Name=WP_010958285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820520.2;locus_tag=NYQ15_RS07775;product=murein hydrolase activator EnvC;protein_id=WP_010958285.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1488843 1490213 . + . ID=gene-NYQ15_RS07780;Name=NYQ15_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07780 NZ_CP103431.1 Protein Homology CDS 1488843 1490213 . + 0 ID=cds-WP_005772638.1;Parent=gene-NYQ15_RS07780;Dbxref=GenBank:WP_005772638.1;Name=WP_005772638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820521.1;locus_tag=NYQ15_RS07780;product=S41 family peptidase;protein_id=WP_005772638.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1490237 1491517 . + . ID=gene-NYQ15_RS07785;Name=NYQ15_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07785 NZ_CP103431.1 Protein Homology CDS 1490237 1491517 . + 0 ID=cds-WP_011996578.1;Parent=gene-NYQ15_RS07785;Dbxref=GenBank:WP_011996578.1;Name=WP_011996578.1;Ontology_term=GO:0006865;gbkey=CDS;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820522.1;locus_tag=NYQ15_RS07785;product=amino acid permease;protein_id=WP_011996578.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1491544 1491873 . + . ID=gene-NYQ15_RS07790;Name=NYQ15_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07790 NZ_CP103431.1 Protein Homology CDS 1491544 1491873 . + 0 ID=cds-WP_010958288.1;Parent=gene-NYQ15_RS07790;Dbxref=GenBank:WP_010958288.1;Name=WP_010958288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820523.1;locus_tag=NYQ15_RS07790;product=hypothetical protein;protein_id=WP_010958288.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1491907 1492005 . + . ID=gene-NYQ15_RS07795;Name=NYQ15_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07795 NZ_CP103431.1 Protein Homology CDS 1491907 1492005 . + 0 ID=cds-WP_010958289.1;Parent=gene-NYQ15_RS07795;Dbxref=GenBank:WP_010958289.1;Name=WP_010958289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820524.1;locus_tag=NYQ15_RS07795;product=hypothetical protein;protein_id=WP_010958289.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1492040 1492369 . - . ID=gene-NYQ15_RS07800;Name=NYQ15_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07800 NZ_CP103431.1 Protein Homology CDS 1492040 1492369 . - 0 ID=cds-WP_005772072.1;Parent=gene-NYQ15_RS07800;Dbxref=GenBank:WP_005772072.1;Name=WP_005772072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820525.1;locus_tag=NYQ15_RS07800;product=membrane protein;protein_id=WP_005772072.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1492684 1493250 . - . ID=gene-NYQ15_RS07805;Name=mceF;gbkey=Gene;gene=mceF;gene_biotype=protein_coding;locus_tag=NYQ15_RS07805 NZ_CP103431.1 Protein Homology CDS 1492684 1493250 . - 0 ID=cds-WP_010958291.1;Parent=gene-NYQ15_RS07805;Dbxref=GenBank:WP_010958291.1;Name=WP_010958291.1;gbkey=CDS;gene=mceF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820526.1;locus_tag=NYQ15_RS07805;product=Dot/Icm T4SS effector MceF;protein_id=WP_010958291.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1494434 1494766 . + . ID=gene-NYQ15_RS07810;Name=NYQ15_RS07810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS07810;partial=true;pseudo=true;start_range=.,1494434 NZ_CP103431.1 GeneMarkS-2+ CDS 1494434 1494766 . + 0 ID=cds-NYQ15_RS07810;Parent=gene-NYQ15_RS07810;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS07810;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1494434;transl_table=11 NZ_CP103431.1 RefSeq gene 1494968 1495129 . + . ID=gene-NYQ15_RS07815;Name=NYQ15_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07815 NZ_CP103431.1 Protein Homology CDS 1494968 1495129 . + 0 ID=cds-WP_259430942.1;Parent=gene-NYQ15_RS07815;Dbxref=GenBank:WP_259430942.1;Name=WP_259430942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220702.1;locus_tag=NYQ15_RS07815;product=hypothetical protein;protein_id=WP_259430942.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1495401 1496195 . - . ID=gene-NYQ15_RS07820;Name=NYQ15_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07820 NZ_CP103431.1 Protein Homology CDS 1495401 1496195 . - 0 ID=cds-WP_005772639.1;Parent=gene-NYQ15_RS07820;Dbxref=GenBank:WP_005772639.1;Name=WP_005772639.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820530.1;locus_tag=NYQ15_RS07820;product=thymidylate synthase;protein_id=WP_005772639.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1496192 1496566 . - . ID=gene-NYQ15_RS07825;Name=NYQ15_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07825 NZ_CP103431.1 Protein Homology CDS 1496192 1496566 . - 0 ID=cds-WP_005772079.1;Parent=gene-NYQ15_RS07825;Dbxref=GenBank:WP_005772079.1;Name=WP_005772079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820531.1;locus_tag=NYQ15_RS07825;product=hypothetical protein;protein_id=WP_005772079.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1496568 1497353 . - . ID=gene-NYQ15_RS07830;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=NYQ15_RS07830 NZ_CP103431.1 Protein Homology CDS 1496568 1497353 . - 0 ID=cds-WP_005772080.1;Parent=gene-NYQ15_RS07830;Dbxref=GenBank:WP_005772080.1;Name=WP_005772080.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820532.1;locus_tag=NYQ15_RS07830;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_005772080.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1497408 1499681 . - . ID=gene-NYQ15_RS07835;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=NYQ15_RS07835 NZ_CP103431.1 Protein Homology CDS 1497408 1499681 . - 0 ID=cds-WP_032075181.1;Parent=gene-NYQ15_RS07835;Dbxref=GenBank:WP_032075181.1;Name=WP_032075181.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010948557.1;locus_tag=NYQ15_RS07835;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_032075181.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1499689 1500198 . - . ID=gene-NYQ15_RS07840;Name=NYQ15_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07840 NZ_CP103431.1 Protein Homology CDS 1499689 1500198 . - 0 ID=cds-WP_005772082.1;Parent=gene-NYQ15_RS07840;Dbxref=GenBank:WP_005772082.1;Name=WP_005772082.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772082.1;locus_tag=NYQ15_RS07840;product=RNA pyrophosphohydrolase;protein_id=WP_005772082.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1500592 1500693 . + . ID=gene-NYQ15_RS07850;Name=NYQ15_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07850 NZ_CP103431.1 Protein Homology CDS 1500592 1500693 . + 0 ID=cds-WP_010958296.1;Parent=gene-NYQ15_RS07850;Dbxref=GenBank:WP_010958296.1;Name=WP_010958296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002333011.1;locus_tag=NYQ15_RS07850;product=hypothetical protein;protein_id=WP_010958296.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1500715 1503540 . + . ID=gene-NYQ15_RS07855;Name=NYQ15_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07855 NZ_CP103431.1 Protein Homology CDS 1500715 1503540 . + 0 ID=cds-WP_005772083.1;Parent=gene-NYQ15_RS07855;Dbxref=GenBank:WP_005772083.1;Name=WP_005772083.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820536.1;locus_tag=NYQ15_RS07855;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_005772083.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1503590 1504795 . + . ID=gene-NYQ15_RS07860;Name=NYQ15_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07860 NZ_CP103431.1 Protein Homology CDS 1503590 1504795 . + 0 ID=cds-WP_010958298.1;Parent=gene-NYQ15_RS07860;Dbxref=GenBank:WP_010958298.1;Name=WP_010958298.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820537.1;locus_tag=NYQ15_RS07860;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_010958298.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1506114 1506233 . + . ID=gene-NYQ15_RS07865;Name=NYQ15_RS07865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS07865;partial=true;pseudo=true;start_range=.,1506114 NZ_CP103431.1 Protein Homology CDS 1506114 1506233 . + 0 ID=cds-NYQ15_RS07865;Parent=gene-NYQ15_RS07865;Note=too many ambiguous residues%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771875.1;locus_tag=NYQ15_RS07865;partial=true;product=ISAs1 family transposase;pseudo=true;start_range=.,1506114;transl_table=11 NZ_CP103431.1 RefSeq gene 1506343 1508046 . + . ID=gene-NYQ15_RS07870;Name=coxCC11;gbkey=Gene;gene=coxCC11;gene_biotype=protein_coding;locus_tag=NYQ15_RS07870 NZ_CP103431.1 Protein Homology CDS 1506343 1508046 . + 0 ID=cds-WP_259430944.1;Parent=gene-NYQ15_RS07870;Dbxref=GenBank:WP_259430944.1;Name=WP_259430944.1;gbkey=CDS;gene=coxCC11;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820539.1;locus_tag=NYQ15_RS07870;product=Dot/Icm T4SS effector CoxCC11;protein_id=WP_259430944.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1508450 1508725 . + . ID=gene-NYQ15_RS07875;Name=NYQ15_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07875 NZ_CP103431.1 Protein Homology CDS 1508450 1508725 . + 0 ID=cds-WP_005772089.1;Parent=gene-NYQ15_RS07875;Dbxref=GenBank:WP_005772089.1;Name=WP_005772089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820541.1;locus_tag=NYQ15_RS07875;product=FmdB family zinc ribbon protein;protein_id=WP_005772089.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1508722 1509351 . + . ID=gene-NYQ15_RS07880;Name=NYQ15_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07880 NZ_CP103431.1 Protein Homology CDS 1508722 1509351 . + 0 ID=cds-WP_005772090.1;Parent=gene-NYQ15_RS07880;Dbxref=GenBank:WP_005772090.1;Name=WP_005772090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820542.1;locus_tag=NYQ15_RS07880;product=DUF502 domain-containing protein;protein_id=WP_005772090.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1509520 1509612 . + . ID=gene-NYQ15_RS07885;Name=NYQ15_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07885 NZ_CP103431.1 Protein Homology CDS 1509520 1509612 . + 0 ID=cds-WP_010958300.1;Parent=gene-NYQ15_RS07885;Dbxref=GenBank:WP_010958300.1;Name=WP_010958300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002333012.1;locus_tag=NYQ15_RS07885;product=hypothetical protein;protein_id=WP_010958300.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1509661 1509786 . + . ID=gene-NYQ15_RS07890;Name=NYQ15_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07890 NZ_CP103431.1 Protein Homology CDS 1509661 1509786 . + 0 ID=cds-WP_010958301.1;Parent=gene-NYQ15_RS07890;Dbxref=GenBank:WP_010958301.1;Name=WP_010958301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820543.1;locus_tag=NYQ15_RS07890;product=hypothetical protein;protein_id=WP_010958301.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1509869 1510657 . + . ID=gene-NYQ15_RS07895;Name=NYQ15_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07895 NZ_CP103431.1 Protein Homology CDS 1509869 1510657 . + 0 ID=cds-WP_010958302.1;Parent=gene-NYQ15_RS07895;Dbxref=GenBank:WP_010958302.1;Name=WP_010958302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820544.2;locus_tag=NYQ15_RS07895;product=hypothetical protein;protein_id=WP_010958302.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1510654 1511319 . - . ID=gene-NYQ15_RS07900;Name=NYQ15_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07900 NZ_CP103431.1 GeneMarkS-2+ CDS 1510654 1511319 . - 0 ID=cds-WP_259423712.1;Parent=gene-NYQ15_RS07900;Dbxref=GenBank:WP_259423712.1;Name=WP_259423712.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS07900;product=hypothetical protein;protein_id=WP_259423712.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1511450 1513201 . - . ID=gene-NYQ15_RS07905;Name=NYQ15_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07905 NZ_CP103431.1 GeneMarkS-2+ CDS 1511450 1513201 . - 0 ID=cds-WP_259423713.1;Parent=gene-NYQ15_RS07905;Dbxref=GenBank:WP_259423713.1;Name=WP_259423713.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS07905;product=hypothetical protein;protein_id=WP_259423713.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1513296 1515128 . + . ID=gene-NYQ15_RS07910;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=NYQ15_RS07910 NZ_CP103431.1 Protein Homology CDS 1513296 1515128 . + 0 ID=cds-WP_098953219.1;Parent=gene-NYQ15_RS07910;Dbxref=GenBank:WP_098953219.1;Name=WP_098953219.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820548.2;locus_tag=NYQ15_RS07910;product=aspartate--tRNA ligase;protein_id=WP_098953219.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1515144 1515878 . + . ID=gene-NYQ15_RS07915;Name=cvpC;gbkey=Gene;gene=cvpC;gene_biotype=protein_coding;locus_tag=NYQ15_RS07915 NZ_CP103431.1 Protein Homology CDS 1515144 1515878 . + 0 ID=cds-WP_005772098.1;Parent=gene-NYQ15_RS07915;Dbxref=GenBank:WP_005772098.1;Name=WP_005772098.1;gbkey=CDS;gene=cvpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820549.1;locus_tag=NYQ15_RS07915;product=Dot/Icm type IV secretion system effector transcriptional regulator CvpC;protein_id=WP_005772098.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1515993 1516511 . + . ID=gene-NYQ15_RS07920;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=NYQ15_RS07920 NZ_CP103431.1 Protein Homology CDS 1515993 1516511 . + 0 ID=cds-WP_005772101.1;Parent=gene-NYQ15_RS07920;Dbxref=GenBank:WP_005772101.1;Name=WP_005772101.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820550.1;locus_tag=NYQ15_RS07920;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_005772101.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1516508 1517110 . + . ID=gene-NYQ15_RS07925;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=NYQ15_RS07925 NZ_CP103431.1 Protein Homology CDS 1516508 1517110 . + 0 ID=cds-WP_005772102.1;Parent=gene-NYQ15_RS07925;Dbxref=GenBank:WP_005772102.1;Name=WP_005772102.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820551.1;locus_tag=NYQ15_RS07925;product=Holliday junction branch migration protein RuvA;protein_id=WP_005772102.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1517210 1518853 . + . ID=gene-NYQ15_RS07930;Name=coxCC12;gbkey=Gene;gene=coxCC12;gene_biotype=protein_coding;locus_tag=NYQ15_RS07930 NZ_CP103431.1 Protein Homology CDS 1517210 1518853 . + 0 ID=cds-WP_040070914.1;Parent=gene-NYQ15_RS07930;Dbxref=GenBank:WP_040070914.1;Name=WP_040070914.1;gbkey=CDS;gene=coxCC12;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820552.1;locus_tag=NYQ15_RS07930;product=Dot/Icm T4SS effector CoxCC12;protein_id=WP_040070914.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1518963 1520018 . + . ID=gene-NYQ15_RS07935;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=NYQ15_RS07935 NZ_CP103431.1 Protein Homology CDS 1518963 1520018 . + 0 ID=cds-WP_005772105.1;Parent=gene-NYQ15_RS07935;Dbxref=GenBank:WP_005772105.1;Name=WP_005772105.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820553.1;locus_tag=NYQ15_RS07935;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_005772105.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1521588 1522823 . + . ID=gene-NYQ15_RS07940;Name=NYQ15_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07940 NZ_CP103431.1 Protein Homology CDS 1521588 1522823 . + 0 ID=cds-WP_005772426.1;Parent=gene-NYQ15_RS07940;Dbxref=GenBank:WP_005772426.1;Name=WP_005772426.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820556.1;locus_tag=NYQ15_RS07940;product=MFS transporter;protein_id=WP_005772426.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1522899 1523612 . + . ID=gene-NYQ15_RS07945;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=NYQ15_RS07945 NZ_CP103431.1 Protein Homology CDS 1522899 1523612 . + 0 ID=cds-WP_005772108.1;Parent=gene-NYQ15_RS07945;Dbxref=GenBank:WP_005772108.1;Name=WP_005772108.1;Ontology_term=GO:0043213,GO:0016020;gbkey=CDS;gene=tolQ;go_component=membrane|0016020||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820557.1;locus_tag=NYQ15_RS07945;product=protein TolQ;protein_id=WP_005772108.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1523590 1524033 . + . ID=gene-NYQ15_RS07950;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=NYQ15_RS07950 NZ_CP103431.1 Protein Homology CDS 1523590 1524033 . + 0 ID=cds-WP_005772109.1;Parent=gene-NYQ15_RS07950;Dbxref=GenBank:WP_005772109.1;Name=WP_005772109.1;Ontology_term=GO:0061024,GO:1902600,GO:0015078,GO:0098567;gbkey=CDS;gene=tolR;go_component=periplasmic side of plasma membrane|0098567||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=membrane organization|0061024||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820558.1;locus_tag=NYQ15_RS07950;product=protein TolR;protein_id=WP_005772109.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1524176 1524343 . + . ID=gene-NYQ15_RS10600;Name=NYQ15_RS10600;end_range=1524343,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10600;partial=true NZ_CP103431.1 Protein Homology CDS 1524176 1524343 . + 0 ID=cds-WP_409049870.1;Parent=gene-NYQ15_RS10600;Dbxref=GenBank:WP_409049870.1;Name=WP_409049870.1;end_range=1524343,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820559.1;locus_tag=NYQ15_RS10600;partial=true;product=hypothetical protein;protein_id=WP_409049870.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1524538 1526698 . + . ID=gene-NYQ15_RS07955;Name=NYQ15_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07955;partial=true;start_range=.,1524538 NZ_CP103431.1 Protein Homology CDS 1524538 1526698 . + 1 ID=cds-WP_259430946.1;Parent=gene-NYQ15_RS07955;Dbxref=GenBank:WP_259430946.1;Name=WP_259430946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820559.1;locus_tag=NYQ15_RS07955;partial=true;product=CBU_1576 family Dot/Icm T4SS effector;protein_id=WP_259430946.1;start_range=.,1524538;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1526664 1527609 . - . ID=gene-NYQ15_RS07960;Name=NYQ15_RS07960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS07960;pseudo=true NZ_CP103431.1 Protein Homology CDS 1526664 1527609 . - 0 ID=cds-NYQ15_RS07960;Parent=gene-NYQ15_RS07960;Note=frameshifted;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820560.1;locus_tag=NYQ15_RS07960;product=L%2CD-transpeptidase family protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1527612 1528448 . - . ID=gene-NYQ15_RS07965;Name=NYQ15_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07965 NZ_CP103431.1 Protein Homology CDS 1527612 1528448 . - 0 ID=cds-WP_005772112.1;Parent=gene-NYQ15_RS07965;Dbxref=GenBank:WP_005772112.1;Name=WP_005772112.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820561.1;locus_tag=NYQ15_RS07965;product=YihY family inner membrane protein;protein_id=WP_005772112.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1528559 1529152 . + . ID=gene-NYQ15_RS07970;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=NYQ15_RS07970 NZ_CP103431.1 Protein Homology CDS 1528559 1529152 . + 0 ID=cds-WP_005772113.1;Parent=gene-NYQ15_RS07970;Dbxref=GenBank:WP_005772113.1;Name=WP_005772113.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820562.1;locus_tag=NYQ15_RS07970;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_005772113.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1529149 1530246 . + . ID=gene-NYQ15_RS07975;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=NYQ15_RS07975 NZ_CP103431.1 Protein Homology CDS 1529149 1530246 . + 0 ID=cds-WP_098953218.1;Parent=gene-NYQ15_RS07975;Dbxref=GenBank:WP_098953218.1;Name=WP_098953218.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820563.1;locus_tag=NYQ15_RS07975;product=cell division protein ZapE;protein_id=WP_098953218.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1530820 1531200 . - . ID=gene-NYQ15_RS07990;Name=mnhG;gbkey=Gene;gene=mnhG;gene_biotype=protein_coding;locus_tag=NYQ15_RS07990 NZ_CP103431.1 Protein Homology CDS 1530820 1531200 . - 0 ID=cds-WP_005772117.1;Parent=gene-NYQ15_RS07990;Dbxref=GenBank:WP_005772117.1;Name=WP_005772117.1;Ontology_term=GO:0098662,GO:0015297,GO:0051139;gbkey=CDS;gene=mnhG;go_function=antiporter activity|0015297||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=inorganic cation transmembrane transport|0098662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820565.1;locus_tag=NYQ15_RS07990;product=monovalent cation/H(+) antiporter subunit G;protein_id=WP_005772117.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1531193 1531495 . - . ID=gene-NYQ15_RS07995;Name=NYQ15_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS07995 NZ_CP103431.1 Protein Homology CDS 1531193 1531495 . - 0 ID=cds-WP_005772118.1;Parent=gene-NYQ15_RS07995;Dbxref=GenBank:WP_005772118.1;Name=WP_005772118.1;Ontology_term=GO:0034220,GO:0015075,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic ion transmembrane transporter activity|0015075||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820566.1;locus_tag=NYQ15_RS07995;product=monovalent cation/H+ antiporter complex subunit F;protein_id=WP_005772118.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1531492 1531839 . - . ID=gene-NYQ15_RS08000;Name=NYQ15_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08000 NZ_CP103431.1 Protein Homology CDS 1531492 1531839 . - 0 ID=cds-WP_005772119.1;Parent=gene-NYQ15_RS08000;Dbxref=GenBank:WP_005772119.1;Name=WP_005772119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820567.1;locus_tag=NYQ15_RS08000;product=Na+/H+ antiporter subunit E;protein_id=WP_005772119.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1531836 1533335 . - . ID=gene-NYQ15_RS08005;Name=NYQ15_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08005 NZ_CP103431.1 Protein Homology CDS 1531836 1533335 . - 0 ID=cds-WP_005772120.1;Parent=gene-NYQ15_RS08005;Dbxref=GenBank:WP_005772120.1;Name=WP_005772120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820568.1;locus_tag=NYQ15_RS08005;product=proton-conducting transporter membrane subunit;protein_id=WP_005772120.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1533332 1533703 . - . ID=gene-NYQ15_RS08010;Name=NYQ15_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08010 NZ_CP103431.1 Protein Homology CDS 1533332 1533703 . - 0 ID=cds-WP_005772121.1;Parent=gene-NYQ15_RS08010;Dbxref=GenBank:WP_005772121.1;Name=WP_005772121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820569.1;locus_tag=NYQ15_RS08010;product=NADH-quinone oxidoreductase subunit K;protein_id=WP_005772121.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1533700 1534107 . - . ID=gene-NYQ15_RS08015;Name=NYQ15_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08015 NZ_CP103431.1 Protein Homology CDS 1533700 1534107 . - 0 ID=cds-WP_040070921.1;Parent=gene-NYQ15_RS08015;Dbxref=GenBank:WP_040070921.1;Name=WP_040070921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820570.1;locus_tag=NYQ15_RS08015;product=Na+/H+ antiporter subunit B;protein_id=WP_040070921.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1534104 1536410 . - . ID=gene-NYQ15_RS08020;Name=NYQ15_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08020 NZ_CP103431.1 Protein Homology CDS 1534104 1536410 . - 0 ID=cds-WP_005772123.1;Parent=gene-NYQ15_RS08020;Dbxref=GenBank:WP_005772123.1;Name=WP_005772123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820571.1;locus_tag=NYQ15_RS08020;product=putative monovalent cation/H+ antiporter subunit A;protein_id=WP_005772123.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1536531 1536839 . - . ID=gene-NYQ15_RS08025;Name=NYQ15_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08025 NZ_CP103431.1 Protein Homology CDS 1536531 1536839 . - 0 ID=cds-WP_005772124.1;Parent=gene-NYQ15_RS08025;Dbxref=GenBank:WP_005772124.1;Name=WP_005772124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820572.1;locus_tag=NYQ15_RS08025;product=bacteriophage holin;protein_id=WP_005772124.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1536928 1538181 . + . ID=gene-NYQ15_RS08030;Name=NYQ15_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08030 NZ_CP103431.1 Protein Homology CDS 1536928 1538181 . + 0 ID=cds-WP_005772126.1;Parent=gene-NYQ15_RS08030;Dbxref=GenBank:WP_005772126.1;Name=WP_005772126.1;Ontology_term=GO:0006814,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820573.1;locus_tag=NYQ15_RS08030;product=sodium:proton antiporter;protein_id=WP_005772126.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1539809 1540033 . + . ID=gene-NYQ15_RS08035;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=NYQ15_RS08035 NZ_CP103431.1 Protein Homology CDS 1539809 1540033 . + 0 ID=cds-WP_005772127.1;Parent=gene-NYQ15_RS08035;Dbxref=GenBank:WP_005772127.1;Name=WP_005772127.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820576.3;locus_tag=NYQ15_RS08035;product=30S ribosomal protein S21;protein_id=WP_005772127.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1540061 1540510 . + . ID=gene-NYQ15_RS08040;Name=NYQ15_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08040 NZ_CP103431.1 Protein Homology CDS 1540061 1540510 . + 0 ID=cds-WP_005772128.1;Parent=gene-NYQ15_RS08040;Dbxref=GenBank:WP_005772128.1;Name=WP_005772128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820577.1;locus_tag=NYQ15_RS08040;product=CBU_1594 family Dot/Icm type IV secretion system effector;protein_id=WP_005772128.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1540608 1542269 . + . ID=gene-NYQ15_RS08045;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=NYQ15_RS08045 NZ_CP103431.1 Protein Homology CDS 1540608 1542269 . + 0 ID=cds-WP_005772129.1;Parent=gene-NYQ15_RS08045;Dbxref=GenBank:WP_005772129.1;Name=WP_005772129.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772129.1;locus_tag=NYQ15_RS08045;product=DNA primase;protein_id=WP_005772129.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1542389 1544485 . + . ID=gene-NYQ15_RS08050;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=NYQ15_RS08050 NZ_CP103431.1 Protein Homology CDS 1542389 1544485 . + 0 ID=cds-WP_259430948.1;Parent=gene-NYQ15_RS08050;Dbxref=GenBank:WP_259430948.1;Name=WP_259430948.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820579.1;locus_tag=NYQ15_RS08050;product=RNA polymerase sigma factor RpoD;protein_id=WP_259430948.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1544609 1544719 . - . ID=gene-NYQ15_RS08055;Name=NYQ15_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08055 NZ_CP103431.1 Protein Homology CDS 1544609 1544719 . - 0 ID=cds-WP_010958323.1;Parent=gene-NYQ15_RS08055;Dbxref=GenBank:WP_010958323.1;Name=WP_010958323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820580.1;locus_tag=NYQ15_RS08055;product=lipoprotein;protein_id=WP_010958323.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1544836 1546602 . + . ID=gene-NYQ15_RS08060;Name=NYQ15_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08060 NZ_CP103431.1 GeneMarkS-2+ CDS 1544836 1546602 . + 0 ID=cds-WP_040070923.1;Parent=gene-NYQ15_RS08060;Dbxref=GenBank:WP_040070923.1;Name=WP_040070923.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS08060;product=hypothetical protein;protein_id=WP_040070923.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1547039 1547115 . - . ID=gene-NYQ15_RS08065;Name=NYQ15_RS08065;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS08065 NZ_CP103431.1 tRNAscan-SE tRNA 1547039 1547115 . - . ID=rna-NYQ15_RS08065;Parent=gene-NYQ15_RS08065;anticodon=(pos:complement(1547079..1547081));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS08065;product=tRNA-Ile NZ_CP103431.1 tRNAscan-SE exon 1547039 1547115 . - . ID=exon-NYQ15_RS08065-1;Parent=rna-NYQ15_RS08065;anticodon=(pos:complement(1547079..1547081));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS08065;product=tRNA-Ile NZ_CP103431.1 RefSeq gene 1547181 1547726 . - . ID=gene-NYQ15_RS08070;Name=NYQ15_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08070 NZ_CP103431.1 Protein Homology CDS 1547181 1547726 . - 0 ID=cds-WP_005773037.1;Parent=gene-NYQ15_RS08070;Dbxref=GenBank:WP_005773037.1;Name=WP_005773037.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820583.1;locus_tag=NYQ15_RS08070;product=outer membrane protein;protein_id=WP_005773037.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1548055 1548540 . + . ID=gene-NYQ15_RS08075;Name=NYQ15_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08075 NZ_CP103431.1 Protein Homology CDS 1548055 1548540 . + 0 ID=cds-WP_010958324.1;Parent=gene-NYQ15_RS08075;Dbxref=GenBank:WP_010958324.1;Name=WP_010958324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820584.1;locus_tag=NYQ15_RS08075;product=ATP-dependent zinc protease;protein_id=WP_010958324.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1548537 1549442 . + . ID=gene-NYQ15_RS08080;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=NYQ15_RS08080 NZ_CP103431.1 Protein Homology CDS 1548537 1549442 . + 0 ID=cds-WP_005769646.1;Parent=gene-NYQ15_RS08080;Dbxref=GenBank:WP_005769646.1;Name=WP_005769646.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820585.1;locus_tag=NYQ15_RS08080;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_005769646.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1549445 1550473 . + . ID=gene-NYQ15_RS08085;Name=NYQ15_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08085 NZ_CP103431.1 Protein Homology CDS 1549445 1550473 . + 0 ID=cds-WP_005772722.1;Parent=gene-NYQ15_RS08085;Dbxref=GenBank:WP_005772722.1;Name=WP_005772722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820586.1;locus_tag=NYQ15_RS08085;product=succinylglutamate desuccinylase/aspartoacylase family protein;protein_id=WP_005772722.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1550466 1552724 . + . ID=gene-NYQ15_RS08090;Name=NYQ15_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08090 NZ_CP103431.1 Protein Homology CDS 1550466 1552724 . + 0 ID=cds-WP_230454423.1;Parent=gene-NYQ15_RS08090;Dbxref=GenBank:WP_230454423.1;Name=WP_230454423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996555.1;locus_tag=NYQ15_RS08090;product=mechanosensitive ion channel family protein;protein_id=WP_230454423.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1552876 1553085 . - . ID=gene-NYQ15_RS10605;Name=NYQ15_RS10605;end_range=1553085,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS10605;partial=true;pseudo=true;start_range=.,1552876 NZ_CP103431.1 Protein Homology CDS 1552876 1553085 . - 0 ID=cds-NYQ15_RS10605;Parent=gene-NYQ15_RS10605;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;end_range=1553085,.;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477429.1;locus_tag=NYQ15_RS10605;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,1552876;transl_table=11 NZ_CP103431.1 RefSeq gene 1553124 1553522 . - . ID=gene-NYQ15_RS08100;Name=NYQ15_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08100 NZ_CP103431.1 Protein Homology CDS 1553124 1553522 . - 0 ID=cds-WP_005772725.1;Parent=gene-NYQ15_RS08100;Dbxref=GenBank:WP_005772725.1;Name=WP_005772725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820589.1;locus_tag=NYQ15_RS08100;product=CBU_1607 family Dot/Icm T4SS effector;protein_id=WP_005772725.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1553819 1554481 . - . ID=gene-NYQ15_RS08105;Name=NYQ15_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08105 NZ_CP103431.1 Protein Homology CDS 1553819 1554481 . - 0 ID=cds-WP_099116150.1;Parent=gene-NYQ15_RS08105;Dbxref=GenBank:WP_099116150.1;Name=WP_099116150.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769637.1;locus_tag=NYQ15_RS08105;product=ankyrin repeat domain-containing protein;protein_id=WP_099116150.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1554631 1556508 . - . ID=gene-NYQ15_RS08110;Name=NYQ15_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08110 NZ_CP103431.1 Protein Homology CDS 1554631 1556508 . - 0 ID=cds-WP_230454424.1;Parent=gene-NYQ15_RS08110;Dbxref=GenBank:WP_230454424.1;Name=WP_230454424.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF024206.5;locus_tag=NYQ15_RS08110;product=ankyrin repeat domain-containing protein;protein_id=WP_230454424.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1556721 1556816 . - . ID=gene-NYQ15_RS08115;Name=NYQ15_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08115 NZ_CP103431.1 Protein Homology CDS 1556721 1556816 . - 0 ID=cds-WP_040070926.1;Parent=gene-NYQ15_RS08115;Dbxref=GenBank:WP_040070926.1;Name=WP_040070926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820594.1;locus_tag=NYQ15_RS08115;product=hypothetical protein;protein_id=WP_040070926.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1556920 1557075 . - . ID=gene-NYQ15_RS08120;Name=NYQ15_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08120 NZ_CP103431.1 Protein Homology CDS 1556920 1557075 . - 0 ID=cds-WP_005769630.1;Parent=gene-NYQ15_RS08120;Dbxref=GenBank:WP_005769630.1;Name=WP_005769630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820595.1;locus_tag=NYQ15_RS08120;product=hypothetical protein;protein_id=WP_005769630.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1557108 1557491 . - . ID=gene-NYQ15_RS08125;Name=NYQ15_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08125 NZ_CP103431.1 Protein Homology CDS 1557108 1557491 . - 0 ID=cds-WP_080512865.1;Parent=gene-NYQ15_RS08125;Dbxref=GenBank:WP_080512865.1;Name=WP_080512865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820596.1;locus_tag=NYQ15_RS08125;product=CBU_1614 family Dot/Icm T4SS effector;protein_id=WP_080512865.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1557645 1558862 . - . ID=gene-NYQ15_RS08130;Name=NYQ15_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08130 NZ_CP103431.1 Protein Homology CDS 1557645 1558862 . - 0 ID=cds-WP_259430949.1;Parent=gene-NYQ15_RS08130;Dbxref=GenBank:WP_259430949.1;Name=WP_259430949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996551.1;locus_tag=NYQ15_RS08130;product=hypothetical protein;protein_id=WP_259430949.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1559184 1559513 . + . ID=gene-NYQ15_RS08135;Name=NYQ15_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08135 NZ_CP103431.1 Protein Homology CDS 1559184 1559513 . + 0 ID=cds-WP_077019604.1;Parent=gene-NYQ15_RS08135;Dbxref=GenBank:WP_077019604.1;Name=WP_077019604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820600.1;locus_tag=NYQ15_RS08135;product=hypothetical protein;protein_id=WP_077019604.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1559570 1559869 . + . ID=gene-NYQ15_RS08140;Name=NYQ15_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08140 NZ_CP103431.1 Protein Homology CDS 1559570 1559869 . + 0 ID=cds-WP_012220725.1;Parent=gene-NYQ15_RS08140;Dbxref=GenBank:WP_012220725.1;Name=WP_012220725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220725.1;locus_tag=NYQ15_RS08140;product=hypothetical protein;protein_id=WP_012220725.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1559890 1560096 . + . ID=gene-NYQ15_RS08145;Name=NYQ15_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08145 NZ_CP103431.1 GeneMarkS-2+ CDS 1559890 1560096 . + 0 ID=cds-WP_040953395.1;Parent=gene-NYQ15_RS08145;Dbxref=GenBank:WP_040953395.1;Name=WP_040953395.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS08145;product=hypothetical protein;protein_id=WP_040953395.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1560314 1560451 . + . ID=gene-NYQ15_RS08150;Name=NYQ15_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08150 NZ_CP103431.1 Protein Homology CDS 1560314 1560451 . + 0 ID=cds-WP_005769621.1;Parent=gene-NYQ15_RS08150;Dbxref=GenBank:WP_005769621.1;Name=WP_005769621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820603.1;locus_tag=NYQ15_RS08150;product=hypothetical protein;protein_id=WP_005769621.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1560466 1563477 . - . ID=gene-NYQ15_RS08155;Name=NYQ15_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08155 NZ_CP103431.1 Protein Homology CDS 1560466 1563477 . - 0 ID=cds-WP_005769619.1;Parent=gene-NYQ15_RS08155;Dbxref=GenBank:WP_005769619.1;Name=WP_005769619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820604.1;locus_tag=NYQ15_RS08155;product=type IVa secretion system protein IcmB;protein_id=WP_005769619.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1563550 1564188 . - . ID=gene-NYQ15_RS08160;Name=icmJ;gbkey=Gene;gene=icmJ;gene_biotype=protein_coding;locus_tag=NYQ15_RS08160 NZ_CP103431.1 Protein Homology CDS 1563550 1564188 . - 0 ID=cds-WP_010958331.1;Parent=gene-NYQ15_RS08160;Dbxref=GenBank:WP_010958331.1;Name=WP_010958331.1;gbkey=CDS;gene=icmJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820605.1;locus_tag=NYQ15_RS08160;product=type IVB secretion system protein IcmJDotN;protein_id=WP_010958331.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1564201 1564617 . - . ID=gene-NYQ15_RS08165;Name=NYQ15_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08165 NZ_CP103431.1 Protein Homology CDS 1564201 1564617 . - 0 ID=cds-WP_005769614.1;Parent=gene-NYQ15_RS08165;Dbxref=GenBank:WP_005769614.1;Name=WP_005769614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820606.1;locus_tag=NYQ15_RS08165;product=hypothetical protein;protein_id=WP_005769614.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1564711 1565220 . - . ID=gene-NYQ15_RS08170;Name=NYQ15_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08170 NZ_CP103431.1 Protein Homology CDS 1564711 1565220 . - 0 ID=cds-WP_005769612.1;Parent=gene-NYQ15_RS08170;Dbxref=GenBank:WP_005769612.1;Name=WP_005769612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820607.1;locus_tag=NYQ15_RS08170;product=hypothetical protein;protein_id=WP_005769612.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1565291 1566025 . - . ID=gene-NYQ15_RS08175;Name=icmG;gbkey=Gene;gene=icmG;gene_biotype=protein_coding;locus_tag=NYQ15_RS08175 NZ_CP103431.1 Protein Homology CDS 1565291 1566025 . - 0 ID=cds-WP_005772726.1;Parent=gene-NYQ15_RS08175;Dbxref=GenBank:WP_005772726.1;Name=WP_005772726.1;gbkey=CDS;gene=icmG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820608.1;locus_tag=NYQ15_RS08175;product=type IVB secretion system protein IcmG/DotF;protein_id=WP_005772726.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1566043 1569162 . - . ID=gene-NYQ15_RS08180;Name=dotG;gbkey=Gene;gene=dotG;gene_biotype=protein_coding;locus_tag=NYQ15_RS08180 NZ_CP103431.1 Protein Homology CDS 1566043 1569162 . - 0 ID=cds-WP_259430950.1;Parent=gene-NYQ15_RS08180;Dbxref=GenBank:WP_259430950.1;Name=WP_259430950.1;gbkey=CDS;gene=dotG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820609.2;locus_tag=NYQ15_RS08180;product=type IVB secretion system protein DotG/IcmE;protein_id=WP_259430950.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1569149 1570204 . - . ID=gene-NYQ15_RS08185;Name=NYQ15_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08185 NZ_CP103431.1 Protein Homology CDS 1569149 1570204 . - 0 ID=cds-WP_080592772.1;Parent=gene-NYQ15_RS08185;Dbxref=GenBank:WP_080592772.1;Name=WP_080592772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820610.2;locus_tag=NYQ15_RS08185;product=DotH/IcmK family type IV secretion protein;protein_id=WP_080592772.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1570215 1570871 . - . ID=gene-NYQ15_RS08190;Name=icmL.1;gbkey=Gene;gene=icmL.1;gene_biotype=protein_coding;locus_tag=NYQ15_RS08190 NZ_CP103431.1 Protein Homology CDS 1570215 1570871 . - 0 ID=cds-WP_005769605.1;Parent=gene-NYQ15_RS08190;Dbxref=GenBank:WP_005769605.1;Name=WP_005769605.1;gbkey=CDS;gene=icmL.1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820611.1;locus_tag=NYQ15_RS08190;product=type IVB secretion system apparatus protein IcmL.1;protein_id=WP_005769605.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1570873 1571496 . - . ID=gene-NYQ15_RS08195;Name=icmL.2;gbkey=Gene;gene=icmL.2;gene_biotype=protein_coding;locus_tag=NYQ15_RS08195 NZ_CP103431.1 Protein Homology CDS 1570873 1571496 . - 0 ID=cds-WP_005769604.1;Parent=gene-NYQ15_RS08195;Dbxref=GenBank:WP_005769604.1;Name=WP_005769604.1;gbkey=CDS;gene=icmL.2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820612.1;locus_tag=NYQ15_RS08195;product=type IVB secretion system apparatus protein IcmL.2;protein_id=WP_005769604.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1571503 1572141 . - . ID=gene-NYQ15_RS08200;Name=NYQ15_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08200 NZ_CP103431.1 Protein Homology CDS 1571503 1572141 . - 0 ID=cds-WP_011996543.1;Parent=gene-NYQ15_RS08200;Dbxref=GenBank:WP_011996543.1;Name=WP_011996543.1;Ontology_term=GO:0015288,GO:0042834;gbkey=CDS;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820613.2;locus_tag=NYQ15_RS08200;product=OmpA family protein;protein_id=WP_011996543.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1572151 1574529 . - . ID=gene-NYQ15_RS08205;Name=NYQ15_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08205 NZ_CP103431.1 Protein Homology CDS 1572151 1574529 . - 0 ID=cds-WP_005769598.1;Parent=gene-NYQ15_RS08205;Dbxref=GenBank:WP_005769598.1;Name=WP_005769598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820614.1;locus_tag=NYQ15_RS08205;product=TraM recognition domain-containing protein;protein_id=WP_005769598.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1574505 1575668 . - . ID=gene-NYQ15_RS08210;Name=icmP;gbkey=Gene;gene=icmP;gene_biotype=protein_coding;locus_tag=NYQ15_RS08210 NZ_CP103431.1 Protein Homology CDS 1574505 1575668 . - 0 ID=cds-WP_005772719.1;Parent=gene-NYQ15_RS08210;Dbxref=GenBank:WP_005772719.1;Name=WP_005772719.1;gbkey=CDS;gene=icmP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820615.1;locus_tag=NYQ15_RS08210;product=type IVB secretion system coupling complex protein DotM/IcmP;protein_id=WP_005772719.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1575669 1576385 . - . ID=gene-NYQ15_RS08215;Name=icmQ;gbkey=Gene;gene=icmQ;gene_biotype=protein_coding;locus_tag=NYQ15_RS08215 NZ_CP103431.1 Protein Homology CDS 1575669 1576385 . - 0 ID=cds-WP_005772730.1;Parent=gene-NYQ15_RS08215;Dbxref=GenBank:WP_005772730.1;Name=WP_005772730.1;gbkey=CDS;gene=icmQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820616.1;locus_tag=NYQ15_RS08215;product=Dot/Icm secretion system protein IcmQ;protein_id=WP_005772730.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1576382 1576531 . - . ID=gene-NYQ15_RS08220;Name=icmR;gbkey=Gene;gene=icmR;gene_biotype=protein_coding;locus_tag=NYQ15_RS08220 NZ_CP103431.1 Protein Homology CDS 1576382 1576531 . - 0 ID=cds-WP_005769595.1;Parent=gene-NYQ15_RS08220;Dbxref=GenBank:WP_005769595.1;Name=WP_005769595.1;Note=CoxigA as found in the Coxiella burnetii Icm/Dot type IV secretion system (T4SS) lacks any sequence homology to IcmR from Legionella system T4SS%2C but is called functionally homologous (i. e. analogous).;gbkey=CDS;gene=icmR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002333017.1;locus_tag=NYQ15_RS08220;product=type IVB secretion system protein CoxigA/IcmR;protein_id=WP_005769595.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1577161 1578333 . - . ID=gene-NYQ15_RS08230;Name=NYQ15_RS08230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS08230;partial=true;pseudo=true;start_range=.,1577161 NZ_CP103431.1 Protein Homology CDS 1577161 1578333 . - 0 ID=cds-NYQ15_RS08230;Parent=gene-NYQ15_RS08230;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820618.1;locus_tag=NYQ15_RS08230;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1577161;transl_table=11 NZ_CP103431.1 RefSeq gene 1578418 1579623 . - . ID=gene-NYQ15_RS08235;Name=NYQ15_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08235 NZ_CP103431.1 Protein Homology CDS 1578418 1579623 . - 0 ID=cds-WP_005769587.1;Parent=gene-NYQ15_RS08235;Dbxref=GenBank:WP_005769587.1;Name=WP_005769587.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820620.1;locus_tag=NYQ15_RS08235;product=ATP-binding protein;protein_id=WP_005769587.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1579735 1580931 . - . ID=gene-NYQ15_RS08240;Name=NYQ15_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08240 NZ_CP103431.1 Protein Homology CDS 1579735 1580931 . - 0 ID=cds-WP_098953196.1;Parent=gene-NYQ15_RS08240;Dbxref=GenBank:WP_098953196.1;Name=WP_098953196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820621.1;locus_tag=NYQ15_RS08240;product=CBU_1639 family Dot/Icm T4SS effector;protein_id=WP_098953196.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1582639 1582896 . + . ID=gene-NYQ15_RS08255;Name=icmT;gbkey=Gene;gene=icmT;gene_biotype=protein_coding;locus_tag=NYQ15_RS08255 NZ_CP103431.1 Protein Homology CDS 1582639 1582896 . + 0 ID=cds-WP_005769580.1;Parent=gene-NYQ15_RS08255;Dbxref=GenBank:WP_005769580.1;Name=WP_005769580.1;gbkey=CDS;gene=icmT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820623.1;locus_tag=NYQ15_RS08255;product=IcmT/TraK family protein;protein_id=WP_005769580.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1582896 1583234 . + . ID=gene-NYQ15_RS08260;Name=NYQ15_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08260 NZ_CP103431.1 Protein Homology CDS 1582896 1583234 . + 0 ID=cds-WP_005769577.1;Parent=gene-NYQ15_RS08260;Dbxref=GenBank:WP_005769577.1;Name=WP_005769577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820624.1;locus_tag=NYQ15_RS08260;product=type IV secretion IcmS family protein;protein_id=WP_005769577.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1583391 1583900 . + . ID=gene-NYQ15_RS08265;Name=dotD;gbkey=Gene;gene=dotD;gene_biotype=protein_coding;locus_tag=NYQ15_RS08265 NZ_CP103431.1 Protein Homology CDS 1583391 1583900 . + 0 ID=cds-WP_005769575.1;Parent=gene-NYQ15_RS08265;Dbxref=GenBank:WP_005769575.1;Name=WP_005769575.1;gbkey=CDS;gene=dotD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820625.2;locus_tag=NYQ15_RS08265;product=type IVB secretion system lipoprotein DotD;protein_id=WP_005769575.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1583903 1584727 . + . ID=gene-NYQ15_RS08270;Name=NYQ15_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08270 NZ_CP103431.1 Protein Homology CDS 1583903 1584727 . + 0 ID=cds-WP_005769573.1;Parent=gene-NYQ15_RS08270;Dbxref=GenBank:WP_005769573.1;Name=WP_005769573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820626.1;locus_tag=NYQ15_RS08270;product=type IV secretion system DotC family protein;protein_id=WP_005769573.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1584765 1585883 . + . ID=gene-NYQ15_RS08275;Name=dotB;gbkey=Gene;gene=dotB;gene_biotype=protein_coding;locus_tag=NYQ15_RS08275 NZ_CP103431.1 Protein Homology CDS 1584765 1585883 . + 0 ID=cds-WP_005769572.1;Parent=gene-NYQ15_RS08275;Dbxref=GenBank:WP_005769572.1;Name=WP_005769572.1;gbkey=CDS;gene=dotB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820627.1;locus_tag=NYQ15_RS08275;product=Dot/Icm type IV secretion system ATPase DotB;protein_id=WP_005769572.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1585890 1587224 . + . ID=gene-NYQ15_RS08280;Name=NYQ15_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08280 NZ_CP103431.1 Protein Homology CDS 1585890 1587224 . + 0 ID=cds-WP_005769570.1;Parent=gene-NYQ15_RS08280;Dbxref=GenBank:WP_005769570.1;Name=WP_005769570.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820628.1;locus_tag=NYQ15_RS08280;product=BCCT family transporter;protein_id=WP_005769570.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1587545 1587640 . - . ID=gene-NYQ15_RS08285;Name=NYQ15_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08285 NZ_CP103431.1 Protein Homology CDS 1587545 1587640 . - 0 ID=cds-WP_010958348.1;Parent=gene-NYQ15_RS08285;Dbxref=GenBank:WP_010958348.1;Name=WP_010958348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820629.1;locus_tag=NYQ15_RS08285;product=hypothetical protein;protein_id=WP_010958348.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1587695 1590139 . - . ID=gene-NYQ15_RS08290;Name=dotA;gbkey=Gene;gene=dotA;gene_biotype=protein_coding;locus_tag=NYQ15_RS08290 NZ_CP103431.1 Protein Homology CDS 1587695 1590139 . - 0 ID=cds-WP_032075204.1;Parent=gene-NYQ15_RS08290;Dbxref=GenBank:WP_032075204.1;Name=WP_032075204.1;gbkey=CDS;gene=dotA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820630.2;locus_tag=NYQ15_RS08290;product=type IVB secretion system protein DotA;protein_id=WP_032075204.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1590136 1590630 . - . ID=gene-NYQ15_RS08295;Name=icmV;gbkey=Gene;gene=icmV;gene_biotype=protein_coding;locus_tag=NYQ15_RS08295 NZ_CP103431.1 Protein Homology CDS 1590136 1590630 . - 0 ID=cds-WP_010958350.1;Parent=gene-NYQ15_RS08295;Dbxref=GenBank:WP_010958350.1;Name=WP_010958350.1;gbkey=CDS;gene=icmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820631.2;locus_tag=NYQ15_RS08295;product=type IVB secretion system protein IcmV;protein_id=WP_010958350.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1590820 1591269 . + . ID=gene-NYQ15_RS08300;Name=icmW;gbkey=Gene;gene=icmW;gene_biotype=protein_coding;locus_tag=NYQ15_RS08300 NZ_CP103431.1 Protein Homology CDS 1590820 1591269 . + 0 ID=cds-WP_005769558.1;Parent=gene-NYQ15_RS08300;Dbxref=GenBank:WP_005769558.1;Name=WP_005769558.1;gbkey=CDS;gene=icmW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820632.1;locus_tag=NYQ15_RS08300;product=type IVB secretion system protein IcmW;protein_id=WP_005769558.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1591266 1591724 . + . ID=gene-NYQ15_RS08305;Name=NYQ15_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08305 NZ_CP103431.1 Protein Homology CDS 1591266 1591724 . + 0 ID=cds-WP_259430953.1;Parent=gene-NYQ15_RS08305;Dbxref=GenBank:WP_259430953.1;Name=WP_259430953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820633.1;locus_tag=NYQ15_RS08305;product=hypothetical protein;protein_id=WP_259430953.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1591740 1592870 . + . ID=gene-NYQ15_RS08310;Name=NYQ15_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08310 NZ_CP103431.1 Protein Homology CDS 1591740 1592870 . + 0 ID=cds-WP_011996534.1;Parent=gene-NYQ15_RS08310;Dbxref=GenBank:WP_011996534.1;Name=WP_011996534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820634.1;locus_tag=NYQ15_RS08310;product=phosphoesterase;protein_id=WP_011996534.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1592952 1593386 . + . ID=gene-NYQ15_RS08315;Name=NYQ15_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08315 NZ_CP103431.1 Protein Homology CDS 1592952 1593386 . + 0 ID=cds-WP_005769550.1;Parent=gene-NYQ15_RS08315;Dbxref=GenBank:WP_005769550.1;Name=WP_005769550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769550.1;locus_tag=NYQ15_RS08315;product=hypothetical protein;protein_id=WP_005769550.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1593587 1593769 . + . ID=gene-NYQ15_RS08320;Name=NYQ15_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08320 NZ_CP103431.1 Protein Homology CDS 1593587 1593769 . + 0 ID=cds-WP_010958352.1;Parent=gene-NYQ15_RS08320;Dbxref=GenBank:WP_010958352.1;Name=WP_010958352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002333019.1;locus_tag=NYQ15_RS08320;product=virulence factor;protein_id=WP_010958352.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1593794 1595284 . - . ID=gene-NYQ15_RS08325;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=NYQ15_RS08325 NZ_CP103431.1 Protein Homology CDS 1593794 1595284 . - 0 ID=cds-WP_011996533.1;Parent=gene-NYQ15_RS08325;Dbxref=GenBank:WP_011996533.1;Name=WP_011996533.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820637.2;locus_tag=NYQ15_RS08325;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_011996533.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1595292 1595395 . - . ID=gene-NYQ15_RS08330;Name=NYQ15_RS08330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS08330;pseudo=true NZ_CP103431.1 Protein Homology CDS 1595292 1595395 . - 0 ID=cds-NYQ15_RS08330;Parent=gene-NYQ15_RS08330;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820638.1;locus_tag=NYQ15_RS08330;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1595563 1596327 . - . ID=gene-NYQ15_RS08335;Name=NYQ15_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08335 NZ_CP103431.1 Protein Homology CDS 1595563 1596327 . - 0 ID=cds-WP_005770612.1;Parent=gene-NYQ15_RS08335;Dbxref=GenBank:WP_005770612.1;Name=WP_005770612.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820639.1;locus_tag=NYQ15_RS08335;product=glycosyltransferase family 2 protein;protein_id=WP_005770612.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1596368 1597453 . - . ID=gene-NYQ15_RS08340;Name=NYQ15_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08340 NZ_CP103431.1 Protein Homology CDS 1596368 1597453 . - 0 ID=cds-WP_005770610.1;Parent=gene-NYQ15_RS08340;Dbxref=GenBank:WP_005770610.1;Name=WP_005770610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820640.1;locus_tag=NYQ15_RS08340;product=glycosyltransferase;protein_id=WP_005770610.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1597502 1598812 . + . ID=gene-NYQ15_RS08345;Name=NYQ15_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08345 NZ_CP103431.1 Protein Homology CDS 1597502 1598812 . + 0 ID=cds-WP_012570637.1;Parent=gene-NYQ15_RS08345;Dbxref=GenBank:WP_012570637.1;Name=WP_012570637.1;Ontology_term=GO:0008754,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=O antigen ligase activity|0008754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820641.2;locus_tag=NYQ15_RS08345;product=O-antigen ligase;protein_id=WP_012570637.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1598809 1599693 . + . ID=gene-NYQ15_RS08350;Name=NYQ15_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08350 NZ_CP103431.1 Protein Homology CDS 1598809 1599693 . + 0 ID=cds-WP_005770606.1;Parent=gene-NYQ15_RS08350;Dbxref=GenBank:WP_005770606.1;Name=WP_005770606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820642.1;locus_tag=NYQ15_RS08350;product=Rossmann-like and DUF2520 domain-containing protein;protein_id=WP_005770606.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1599678 1600709 . - . ID=gene-NYQ15_RS08355;Name=waaF;gbkey=Gene;gene=waaF;gene_biotype=protein_coding;locus_tag=NYQ15_RS08355 NZ_CP103431.1 Protein Homology CDS 1599678 1600709 . - 0 ID=cds-WP_005770604.1;Parent=gene-NYQ15_RS08355;Dbxref=GenBank:WP_005770604.1;Name=WP_005770604.1;Ontology_term=GO:0009103,GO:0008920,GO:0016757;gbkey=CDS;gene=waaF;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA,glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820643.1;locus_tag=NYQ15_RS08355;product=lipopolysaccharide heptosyltransferase II;protein_id=WP_005770604.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1600713 1600919 . - . ID=gene-NYQ15_RS08360;Name=NYQ15_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08360 NZ_CP103431.1 Protein Homology CDS 1600713 1600919 . - 0 ID=cds-WP_010958359.1;Parent=gene-NYQ15_RS08360;Dbxref=GenBank:WP_010958359.1;Name=WP_010958359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820644.2;locus_tag=NYQ15_RS08360;product=zinc-finger domain-containing protein;protein_id=WP_010958359.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1600980 1601111 . - . ID=gene-NYQ15_RS08365;Name=NYQ15_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08365 NZ_CP103431.1 Protein Homology CDS 1600980 1601111 . - 0 ID=cds-WP_005770599.1;Parent=gene-NYQ15_RS08365;Dbxref=GenBank:WP_005770599.1;Name=WP_005770599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820645.1;locus_tag=NYQ15_RS08365;product=hypothetical protein;protein_id=WP_005770599.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1601182 1601775 . + . ID=gene-NYQ15_RS08370;Name=NYQ15_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08370 NZ_CP103431.1 Protein Homology CDS 1601182 1601775 . + 0 ID=cds-WP_005772235.1;Parent=gene-NYQ15_RS08370;Dbxref=GenBank:WP_005772235.1;Name=WP_005772235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820646.1;locus_tag=NYQ15_RS08370;product=CBS domain-containing protein;protein_id=WP_005772235.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1601772 1603511 . - . ID=gene-NYQ15_RS08375;Name=NYQ15_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08375 NZ_CP103431.1 Protein Homology CDS 1601772 1603511 . - 0 ID=cds-WP_011996527.1;Parent=gene-NYQ15_RS08375;Dbxref=GenBank:WP_011996527.1;Name=WP_011996527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820647.1;locus_tag=NYQ15_RS08375;product=CBU_1665 family Dot/Icm T4SS effector;protein_id=WP_011996527.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1603892 1604791 . - . ID=gene-NYQ15_RS08380;Name=NYQ15_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08380 NZ_CP103431.1 Protein Homology CDS 1603892 1604791 . - 0 ID=cds-WP_242438583.1;Parent=gene-NYQ15_RS08380;Dbxref=GenBank:WP_242438583.1;Name=WP_242438583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220745.1;locus_tag=NYQ15_RS08380;product=hypothetical protein;protein_id=WP_242438583.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1604818 1605279 . - . ID=gene-NYQ15_RS08385;Name=NYQ15_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08385 NZ_CP103431.1 Protein Homology CDS 1604818 1605279 . - 0 ID=cds-WP_012220746.1;Parent=gene-NYQ15_RS08385;Dbxref=GenBank:WP_012220746.1;Name=WP_012220746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220746.1;locus_tag=NYQ15_RS08385;product=hypothetical protein;protein_id=WP_012220746.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1605527 1606585 . - . ID=gene-NYQ15_RS08395;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=NYQ15_RS08395 NZ_CP103431.1 Protein Homology CDS 1605527 1606585 . - 0 ID=cds-WP_005770591.1;Parent=gene-NYQ15_RS08395;Dbxref=GenBank:WP_005770591.1;Name=WP_005770591.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820651.1;locus_tag=NYQ15_RS08395;product=RNA polymerase sigma factor RpoS;protein_id=WP_005770591.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1606665 1607357 . - . ID=gene-NYQ15_RS08400;Name=NYQ15_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08400 NZ_CP103431.1 Protein Homology CDS 1606665 1607357 . - 0 ID=cds-WP_005770589.1;Parent=gene-NYQ15_RS08400;Dbxref=GenBank:WP_005770589.1;Name=WP_005770589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820652.1;locus_tag=NYQ15_RS08400;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_005770589.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1607359 1608135 . - . ID=gene-NYQ15_RS08405;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=NYQ15_RS08405 NZ_CP103431.1 Protein Homology CDS 1607359 1608135 . - 0 ID=cds-WP_005770587.1;Parent=gene-NYQ15_RS08405;Dbxref=GenBank:WP_005770587.1;Name=WP_005770587.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010653396.1;locus_tag=NYQ15_RS08405;product=5'/3'-nucleotidase SurE;protein_id=WP_005770587.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1608205 1608474 . - . ID=gene-NYQ15_RS08410;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=NYQ15_RS08410 NZ_CP103431.1 Protein Homology CDS 1608205 1608474 . - 0 ID=cds-WP_005770584.1;Parent=gene-NYQ15_RS08410;Dbxref=GenBank:WP_005770584.1;Name=WP_005770584.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820655.1;locus_tag=NYQ15_RS08410;product=cell division protein FtsB;protein_id=WP_005770584.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1608481 1609767 . - . ID=gene-NYQ15_RS08415;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=NYQ15_RS08415 NZ_CP103431.1 Protein Homology CDS 1608481 1609767 . - 0 ID=cds-WP_005770583.1;Parent=gene-NYQ15_RS08415;Dbxref=GenBank:WP_005770583.1;Name=WP_005770583.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820656.1;locus_tag=NYQ15_RS08415;product=phosphopyruvate hydratase;protein_id=WP_005770583.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1609924 1610766 . - . ID=gene-NYQ15_RS08420;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=NYQ15_RS08420 NZ_CP103431.1 Protein Homology CDS 1609924 1610766 . - 0 ID=cds-WP_012570635.1;Parent=gene-NYQ15_RS08420;Dbxref=GenBank:WP_012570635.1;Name=WP_012570635.1;Ontology_term=GO:0009058,GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820657.1;locus_tag=NYQ15_RS08420;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_012570635.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1611079 1612164 . - . ID=gene-NYQ15_RS08425;Name=NYQ15_RS08425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS08425;pseudo=true NZ_CP103431.1 Protein Homology CDS 1611079 1612164 . - 0 ID=cds-NYQ15_RS08425;Parent=gene-NYQ15_RS08425;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820658.1;locus_tag=NYQ15_RS08425;product=CBU_1676 family Dot/Icm T4SS effector;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1612234 1612668 . - . ID=gene-NYQ15_RS08430;Name=NYQ15_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08430 NZ_CP103431.1 Protein Homology CDS 1612234 1612668 . - 0 ID=cds-WP_005770580.1;Parent=gene-NYQ15_RS08430;Dbxref=GenBank:WP_005770580.1;Name=WP_005770580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820659.1;locus_tag=NYQ15_RS08430;product=CBU_1677 family Dot/Icm type IV secretion system effector;protein_id=WP_005770580.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1612801 1613313 . + . ID=gene-NYQ15_RS08435;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=NYQ15_RS08435 NZ_CP103431.1 Protein Homology CDS 1612801 1613313 . + 0 ID=cds-WP_005772212.1;Parent=gene-NYQ15_RS08435;Dbxref=GenBank:WP_005772212.1;Name=WP_005772212.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820660.1;locus_tag=NYQ15_RS08435;product=spermidine N1-acetyltransferase;protein_id=WP_005772212.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1613491 1614726 . + . ID=gene-NYQ15_RS08440;Name=NYQ15_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08440 NZ_CP103431.1 GeneMarkS-2+ CDS 1613491 1614726 . + 0 ID=cds-WP_235206087.1;Parent=gene-NYQ15_RS08440;Dbxref=GenBank:WP_235206087.1;Name=WP_235206087.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS08440;product=hypothetical protein;protein_id=WP_235206087.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1614900 1615196 . - . ID=gene-NYQ15_RS08445;Name=NYQ15_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08445 NZ_CP103431.1 Protein Homology CDS 1614900 1615196 . - 0 ID=cds-WP_010958368.1;Parent=gene-NYQ15_RS08445;Dbxref=GenBank:WP_010958368.1;Name=WP_010958368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820663.2;locus_tag=NYQ15_RS08445;product=hypothetical protein;protein_id=WP_010958368.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1615237 1616904 . - . ID=gene-NYQ15_RS08450;Name=NYQ15_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08450 NZ_CP103431.1 Protein Homology CDS 1615237 1616904 . - 0 ID=cds-WP_005770567.1;Parent=gene-NYQ15_RS08450;Dbxref=GenBank:WP_005770567.1;Name=WP_005770567.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820664.1;locus_tag=NYQ15_RS08450;product=CTP synthase;protein_id=WP_005770567.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1616939 1617070 . - . ID=gene-NYQ15_RS08455;Name=NYQ15_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08455 NZ_CP103431.1 Protein Homology CDS 1616939 1617070 . - 0 ID=cds-WP_005770565.1;Parent=gene-NYQ15_RS08455;Dbxref=GenBank:WP_005770565.1;Name=WP_005770565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820665.1;locus_tag=NYQ15_RS08455;product=hypothetical protein;protein_id=WP_005770565.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1617240 1617332 . + . ID=gene-NYQ15_RS08460;Name=NYQ15_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08460 NZ_CP103431.1 Protein Homology CDS 1617240 1617332 . + 0 ID=cds-WP_010958371.1;Parent=gene-NYQ15_RS08460;Dbxref=GenBank:WP_010958371.1;Name=WP_010958371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820666.1;locus_tag=NYQ15_RS08460;product=hypothetical protein;protein_id=WP_010958371.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1617407 1618828 . + . ID=gene-NYQ15_RS08465;Name=NYQ15_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08465 NZ_CP103431.1 Protein Homology CDS 1617407 1618828 . + 0 ID=cds-WP_259430954.1;Parent=gene-NYQ15_RS08465;Dbxref=GenBank:WP_259430954.1;Name=WP_259430954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820667.1;locus_tag=NYQ15_RS08465;product=CBU_1685 family Dot/Icm T4SS effector;protein_id=WP_259430954.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1618850 1621171 . + . ID=gene-NYQ15_RS08470;Name=cetCb5;gbkey=Gene;gene=cetCb5;gene_biotype=protein_coding;locus_tag=NYQ15_RS08470 NZ_CP103431.1 Protein Homology CDS 1618850 1621171 . + 0 ID=cds-WP_259423724.1;Parent=gene-NYQ15_RS08470;Dbxref=GenBank:WP_259423724.1;Name=WP_259423724.1;gbkey=CDS;gene=cetCb5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820668.1;locus_tag=NYQ15_RS08470;product=Dot/Icm T4SS effector CetCb5;protein_id=WP_259423724.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1621232 1622632 . - . ID=gene-NYQ15_RS08475;Name=NYQ15_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08475 NZ_CP103431.1 Protein Homology CDS 1621232 1622632 . - 0 ID=cds-WP_143433546.1;Parent=gene-NYQ15_RS08475;Dbxref=GenBank:WP_143433546.1;Name=WP_143433546.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022752.5;locus_tag=NYQ15_RS08475;product=glycoside hydrolase;protein_id=WP_143433546.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1622752 1623531 . - . ID=gene-NYQ15_RS08480;Name=NYQ15_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08480 NZ_CP103431.1 GeneMarkS-2+ CDS 1622752 1623531 . - 0 ID=cds-WP_005772223.1;Parent=gene-NYQ15_RS08480;Dbxref=GenBank:WP_005772223.1;Name=WP_005772223.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS08480;product=hypothetical protein;protein_id=WP_005772223.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1623685 1624251 . - . ID=gene-NYQ15_RS08485;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=NYQ15_RS08485 NZ_CP103431.1 Protein Homology CDS 1623685 1624251 . - 0 ID=cds-WP_259430955.1;Parent=gene-NYQ15_RS08485;Dbxref=GenBank:WP_259430955.1;Name=WP_259430955.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820669.1;locus_tag=NYQ15_RS08485;product=dCTP deaminase;protein_id=WP_259430955.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1624251 1625171 . - . ID=gene-NYQ15_RS08490;Name=NYQ15_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08490 NZ_CP103431.1 Protein Homology CDS 1624251 1625171 . - 0 ID=cds-WP_005770555.1;Parent=gene-NYQ15_RS08490;Dbxref=GenBank:WP_005770555.1;Name=WP_005770555.1;Ontology_term=GO:0005524,GO:0016887,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820670.1;locus_tag=NYQ15_RS08490;product=Mrp/NBP35 family ATP-binding protein;protein_id=WP_005770555.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1625397 1625498 . + . ID=gene-NYQ15_RS08495;Name=NYQ15_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08495 NZ_CP103431.1 Protein Homology CDS 1625397 1625498 . + 0 ID=cds-WP_010958374.1;Parent=gene-NYQ15_RS08495;Dbxref=GenBank:WP_010958374.1;Name=WP_010958374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820671.1;locus_tag=NYQ15_RS08495;product=hypothetical protein;protein_id=WP_010958374.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1625605 1625931 . - . ID=gene-NYQ15_RS08500;Name=NYQ15_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08500 NZ_CP103431.1 Protein Homology CDS 1625605 1625931 . - 0 ID=cds-WP_005770554.1;Parent=gene-NYQ15_RS08500;Dbxref=GenBank:WP_005770554.1;Name=WP_005770554.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820672.1;locus_tag=NYQ15_RS08500;product=helix-turn-helix domain-containing protein;protein_id=WP_005770554.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1625924 1626094 . - . ID=gene-NYQ15_RS08505;Name=NYQ15_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08505 NZ_CP103431.1 Protein Homology CDS 1625924 1626094 . - 0 ID=cds-WP_005770552.1;Parent=gene-NYQ15_RS08505;Dbxref=GenBank:WP_005770552.1;Name=WP_005770552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820673.1;locus_tag=NYQ15_RS08505;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_005770552.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1626167 1626292 . + . ID=gene-NYQ15_RS08510;Name=NYQ15_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08510 NZ_CP103431.1 Protein Homology CDS 1626167 1626292 . + 0 ID=cds-WP_010958376.1;Parent=gene-NYQ15_RS08510;Dbxref=GenBank:WP_010958376.1;Name=WP_010958376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002333021.1;locus_tag=NYQ15_RS08510;product=hypothetical protein;protein_id=WP_010958376.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1626289 1626549 . - . ID=gene-NYQ15_RS08515;Name=NYQ15_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08515 NZ_CP103431.1 GeneMarkS-2+ CDS 1626289 1626549 . - 0 ID=cds-WP_259430956.1;Parent=gene-NYQ15_RS08515;Dbxref=GenBank:WP_259430956.1;Name=WP_259430956.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS08515;product=hypothetical protein;protein_id=WP_259430956.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1626539 1628059 . - . ID=gene-NYQ15_RS08520;Name=NYQ15_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08520 NZ_CP103431.1 GeneMarkS-2+ CDS 1626539 1628059 . - 0 ID=cds-WP_259430957.1;Parent=gene-NYQ15_RS08520;Dbxref=GenBank:WP_259430957.1;Name=WP_259430957.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS08520;product=hypothetical protein;protein_id=WP_259430957.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1628279 1629919 . + . ID=gene-NYQ15_RS08525;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=NYQ15_RS08525 NZ_CP103431.1 Protein Homology CDS 1628279 1629919 . + 0 ID=cds-WP_005772215.1;Parent=gene-NYQ15_RS08525;Dbxref=GenBank:WP_005772215.1;Name=WP_005772215.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820676.1;locus_tag=NYQ15_RS08525;product=methionine--tRNA ligase;protein_id=WP_005772215.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1629912 1630553 . + . ID=gene-NYQ15_RS08530;Name=NYQ15_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08530 NZ_CP103431.1 Protein Homology CDS 1629912 1630553 . + 0 ID=cds-WP_005772219.1;Parent=gene-NYQ15_RS08530;Dbxref=GenBank:WP_005772219.1;Name=WP_005772219.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820677.1;locus_tag=NYQ15_RS08530;product=RnfABCDGE type electron transport complex subunit B;protein_id=WP_005772219.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1630540 1631196 . + . ID=gene-NYQ15_RS08535;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=NYQ15_RS08535 NZ_CP103431.1 Protein Homology CDS 1630540 1631196 . + 0 ID=cds-WP_005770546.1;Parent=gene-NYQ15_RS08535;Dbxref=GenBank:WP_005770546.1;Name=WP_005770546.1;Ontology_term=GO:0006281,GO:0140078;gbkey=CDS;gene=nth;go_function=class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820678.1;locus_tag=NYQ15_RS08535;product=endonuclease III;protein_id=WP_005770546.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1631171 1632430 . - . ID=gene-NYQ15_RS08540;Name=NYQ15_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08540 NZ_CP103431.1 Protein Homology CDS 1631171 1632430 . - 0 ID=cds-WP_043902269.1;Parent=gene-NYQ15_RS08540;Dbxref=GenBank:WP_043902269.1;Name=WP_043902269.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820679.1;locus_tag=NYQ15_RS08540;product=ATP-binding protein;protein_id=WP_043902269.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1632434 1633990 . - . ID=gene-NYQ15_RS08545;Name=NYQ15_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08545 NZ_CP103431.1 Protein Homology CDS 1632434 1633990 . - 0 ID=cds-WP_005772234.1;Parent=gene-NYQ15_RS08545;Dbxref=GenBank:WP_005772234.1;Name=WP_005772234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820680.1;locus_tag=NYQ15_RS08545;product=LbtU family siderophore porin;protein_id=WP_005772234.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1634269 1634366 . + . ID=gene-NYQ15_RS08555;Name=NYQ15_RS08555;end_range=1634366,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08555;partial=true;start_range=.,1634269 NZ_CP103431.1 Protein Homology CDS 1634269 1634366 . + 1 ID=cds-WP_259411840.1;Parent=gene-NYQ15_RS08555;Dbxref=GenBank:WP_259411840.1;Name=WP_259411840.1;end_range=1634366,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819062.3;locus_tag=NYQ15_RS08555;partial=true;product=hypothetical protein;protein_id=WP_259411840.1;start_range=.,1634269;transl_table=11 NZ_CP103431.1 RefSeq gene 1635645 1637051 . + . ID=gene-NYQ15_RS08565;Name=NYQ15_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08565 NZ_CP103431.1 Protein Homology CDS 1635645 1637051 . + 0 ID=cds-WP_005770542.1;Parent=gene-NYQ15_RS08565;Dbxref=GenBank:WP_005770542.1;Name=WP_005770542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820682.1;locus_tag=NYQ15_RS08565;product=hypothetical protein;protein_id=WP_005770542.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1637126 1637260 . - . ID=gene-NYQ15_RS08570;Name=NYQ15_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08570 NZ_CP103431.1 Protein Homology CDS 1637126 1637260 . - 0 ID=cds-WP_010958383.1;Parent=gene-NYQ15_RS08570;Dbxref=GenBank:WP_010958383.1;Name=WP_010958383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820683.1;locus_tag=NYQ15_RS08570;product=hypothetical protein;protein_id=WP_010958383.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1637340 1638395 . + . ID=gene-NYQ15_RS08575;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=NYQ15_RS08575 NZ_CP103431.1 Protein Homology CDS 1637340 1638395 . + 0 ID=cds-WP_011996513.1;Parent=gene-NYQ15_RS08575;Dbxref=GenBank:WP_011996513.1;Name=WP_011996513.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820684.1;locus_tag=NYQ15_RS08575;product=dihydroorotase;protein_id=WP_011996513.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1638382 1639056 . + . ID=gene-NYQ15_RS08580;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=NYQ15_RS08580 NZ_CP103431.1 Protein Homology CDS 1638382 1639056 . + 0 ID=cds-WP_005770539.1;Parent=gene-NYQ15_RS08580;Dbxref=GenBank:WP_005770539.1;Name=WP_005770539.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820685.1;locus_tag=NYQ15_RS08580;product=ribonuclease T;protein_id=WP_005770539.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1639053 1639442 . - . ID=gene-NYQ15_RS08585;Name=NYQ15_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08585 NZ_CP103431.1 Protein Homology CDS 1639053 1639442 . - 0 ID=cds-WP_011996512.1;Parent=gene-NYQ15_RS08585;Dbxref=GenBank:WP_011996512.1;Name=WP_011996512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820686.2;locus_tag=NYQ15_RS08585;product=hypothetical protein;protein_id=WP_011996512.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1639500 1640102 . - . ID=gene-NYQ15_RS08590;Name=NYQ15_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08590 NZ_CP103431.1 Protein Homology CDS 1639500 1640102 . - 0 ID=cds-WP_259411679.1;Parent=gene-NYQ15_RS08590;Dbxref=GenBank:WP_259411679.1;Name=WP_259411679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820687.1;locus_tag=NYQ15_RS08590;product=peroxiredoxin;protein_id=WP_259411679.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1640140 1640232 . - . ID=gene-NYQ15_RS08595;Name=NYQ15_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08595 NZ_CP103431.1 Protein Homology CDS 1640140 1640232 . - 0 ID=cds-WP_010958387.1;Parent=gene-NYQ15_RS08595;Dbxref=GenBank:WP_010958387.1;Name=WP_010958387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820688.1;locus_tag=NYQ15_RS08595;product=hypothetical protein;protein_id=WP_010958387.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1640319 1640900 . + . ID=gene-NYQ15_RS08600;Name=NYQ15_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08600 NZ_CP103431.1 Protein Homology CDS 1640319 1640900 . + 0 ID=cds-WP_005770533.1;Parent=gene-NYQ15_RS08600;Dbxref=GenBank:WP_005770533.1;Name=WP_005770533.1;Ontology_term=GO:0004784,GO:0046872;gbkey=CDS;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820689.1;locus_tag=NYQ15_RS08600;product=superoxide dismutase;protein_id=WP_005770533.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1640902 1641621 . + . ID=gene-NYQ15_RS08605;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=NYQ15_RS08605 NZ_CP103431.1 Protein Homology CDS 1640902 1641621 . + 0 ID=cds-WP_005770530.1;Parent=gene-NYQ15_RS08605;Dbxref=GenBank:WP_005770530.1;Name=WP_005770530.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820690.1;locus_tag=NYQ15_RS08605;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_005770530.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1641624 1642061 . + . ID=gene-NYQ15_RS08610;Name=NYQ15_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08610 NZ_CP103431.1 Protein Homology CDS 1641624 1642061 . + 0 ID=cds-WP_005772210.1;Parent=gene-NYQ15_RS08610;Dbxref=GenBank:WP_005772210.1;Name=WP_005772210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820691.1;locus_tag=NYQ15_RS08610;product=hypothetical protein;protein_id=WP_005772210.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1642220 1642408 . + . ID=gene-NYQ15_RS08615;Name=NYQ15_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08615 NZ_CP103431.1 Protein Homology CDS 1642220 1642408 . + 0 ID=cds-WP_005770527.1;Parent=gene-NYQ15_RS08615;Dbxref=GenBank:WP_005770527.1;Name=WP_005770527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820692.1;locus_tag=NYQ15_RS08615;product=hypothetical protein;protein_id=WP_005770527.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1642425 1642715 . + . ID=gene-NYQ15_RS08620;Name=NYQ15_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08620 NZ_CP103431.1 Protein Homology CDS 1642425 1642715 . + 0 ID=cds-WP_005770525.1;Parent=gene-NYQ15_RS08620;Dbxref=GenBank:WP_005770525.1;Name=WP_005770525.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820693.1;locus_tag=NYQ15_RS08620;product=GIY-YIG nuclease family protein;protein_id=WP_005770525.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1642812 1644287 . - . ID=gene-NYQ15_RS08625;Name=gcvPB;gbkey=Gene;gene=gcvPB;gene_biotype=protein_coding;locus_tag=NYQ15_RS08625 NZ_CP103431.1 Protein Homology CDS 1642812 1644287 . - 0 ID=cds-WP_040070411.1;Parent=gene-NYQ15_RS08625;Dbxref=GenBank:WP_040070411.1;Name=WP_040070411.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPB;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820694.1;locus_tag=NYQ15_RS08625;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPB;protein_id=WP_040070411.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1644355 1645695 . - . ID=gene-NYQ15_RS08630;Name=gcvPA;gbkey=Gene;gene=gcvPA;gene_biotype=protein_coding;locus_tag=NYQ15_RS08630 NZ_CP103431.1 Protein Homology CDS 1644355 1645695 . - 0 ID=cds-WP_005770511.1;Parent=gene-NYQ15_RS08630;Dbxref=GenBank:WP_005770511.1;Name=WP_005770511.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPA;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820695.1;locus_tag=NYQ15_RS08630;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPA;protein_id=WP_005770511.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1645698 1646090 . - . ID=gene-NYQ15_RS08635;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=NYQ15_RS08635 NZ_CP103431.1 Protein Homology CDS 1645698 1646090 . - 0 ID=cds-WP_005770508.1;Parent=gene-NYQ15_RS08635;Dbxref=GenBank:WP_005770508.1;Name=WP_005770508.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820696.1;locus_tag=NYQ15_RS08635;product=glycine cleavage system protein GcvH;protein_id=WP_005770508.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1646101 1647252 . - . ID=gene-NYQ15_RS08640;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=NYQ15_RS08640 NZ_CP103431.1 Protein Homology CDS 1646101 1647252 . - 0 ID=cds-WP_259431115.1;Parent=gene-NYQ15_RS08640;Dbxref=GenBank:WP_259431115.1;Name=WP_259431115.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253378.1;locus_tag=NYQ15_RS08640;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_259431115.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1648754 1650412 . - . ID=gene-NYQ15_RS08650;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=NYQ15_RS08650 NZ_CP103431.1 Protein Homology CDS 1648754 1650412 . - 0 ID=cds-WP_005770500.1;Parent=gene-NYQ15_RS08650;Dbxref=GenBank:WP_005770500.1;Name=WP_005770500.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=NYQ15_RS08650;product=chaperonin GroEL;protein_id=WP_005770500.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1650440 1650730 . - . ID=gene-NYQ15_RS08655;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=NYQ15_RS08655 NZ_CP103431.1 Protein Homology CDS 1650440 1650730 . - 0 ID=cds-WP_005770495.1;Parent=gene-NYQ15_RS08655;Dbxref=GenBank:WP_005770495.1;Name=WP_005770495.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=groES;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820700.3;locus_tag=NYQ15_RS08655;product=co-chaperone GroES;protein_id=WP_005770495.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1650852 1653605 . + . ID=gene-NYQ15_RS08660;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=NYQ15_RS08660 NZ_CP103431.1 Protein Homology CDS 1650852 1653605 . + 0 ID=cds-WP_080592794.1;Parent=gene-NYQ15_RS08660;Dbxref=GenBank:WP_080592794.1;Name=WP_080592794.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820701.2;locus_tag=NYQ15_RS08660;product=aconitate hydratase AcnA;protein_id=WP_080592794.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1653616 1654326 . + . ID=gene-NYQ15_RS08665;Name=NYQ15_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08665 NZ_CP103431.1 Protein Homology CDS 1653616 1654326 . + 0 ID=cds-WP_005770491.1;Parent=gene-NYQ15_RS08665;Dbxref=GenBank:WP_005770491.1;Name=WP_005770491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820702.1;locus_tag=NYQ15_RS08665;product=MBL fold metallo-hydrolase;protein_id=WP_005770491.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1654342 1654848 . - . ID=gene-NYQ15_RS08670;Name=NYQ15_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08670 NZ_CP103431.1 GeneMarkS-2+ CDS 1654342 1654848 . - 0 ID=cds-WP_259430958.1;Parent=gene-NYQ15_RS08670;Dbxref=GenBank:WP_259430958.1;Name=WP_259430958.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS08670;product=hypothetical protein;protein_id=WP_259430958.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1654923 1656146 . - . ID=gene-NYQ15_RS08675;Name=NYQ15_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08675;partial=true;start_range=.,1654923 NZ_CP103431.1 Protein Homology CDS 1654923 1656146 . - 0 ID=cds-WP_259430959.1;Parent=gene-NYQ15_RS08675;Dbxref=GenBank:WP_259430959.1;Name=WP_259430959.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.5;locus_tag=NYQ15_RS08675;partial=true;product=AMP-binding protein;protein_id=WP_259430959.1;start_range=.,1654923;transl_table=11 NZ_CP103431.1 RefSeq gene 1656342 1658120 . + . ID=gene-NYQ15_RS08680;Name=dsbD;gbkey=Gene;gene=dsbD;gene_biotype=protein_coding;locus_tag=NYQ15_RS08680 NZ_CP103431.1 Protein Homology CDS 1656342 1658120 . + 0 ID=cds-WP_259411682.1;Parent=gene-NYQ15_RS08680;Dbxref=GenBank:WP_259411682.1;Name=WP_259411682.1;Ontology_term=GO:0047134;gbkey=CDS;gene=dsbD;go_function=protein-disulfide reductase (NAD(P)H) activity|0047134||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569593.1;locus_tag=NYQ15_RS08680;product=protein-disulfide reductase DsbD;protein_id=WP_259411682.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1658129 1660372 . - . ID=gene-NYQ15_RS08685;Name=cetCb6;gbkey=Gene;gene=cetCb6;gene_biotype=protein_coding;locus_tag=NYQ15_RS08685 NZ_CP103431.1 Protein Homology CDS 1658129 1660372 . - 0 ID=cds-WP_032074793.1;Parent=gene-NYQ15_RS08685;Dbxref=GenBank:WP_032074793.1;Name=WP_032074793.1;gbkey=CDS;gene=cetCb6;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820705.1;locus_tag=NYQ15_RS08685;product=Dot/Icm T4SS effector CetCb6;protein_id=WP_032074793.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1660965 1661429 . + . ID=gene-NYQ15_RS08690;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=NYQ15_RS08690 NZ_CP103431.1 Protein Homology CDS 1660965 1661429 . + 0 ID=cds-WP_005770468.1;Parent=gene-NYQ15_RS08690;Dbxref=GenBank:WP_005770468.1;Name=WP_005770468.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820706.1;locus_tag=NYQ15_RS08690;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_005770468.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1661436 1662782 . + . ID=gene-NYQ15_RS08695;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=NYQ15_RS08695 NZ_CP103431.1 Protein Homology CDS 1661436 1662782 . + 0 ID=cds-WP_005770466.1;Parent=gene-NYQ15_RS08695;Dbxref=GenBank:WP_005770466.1;Name=WP_005770466.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820707.1;locus_tag=NYQ15_RS08695;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_005770466.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1662834 1663844 . - . ID=gene-NYQ15_RS08700;Name=NYQ15_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08700 NZ_CP103431.1 Protein Homology CDS 1662834 1663844 . - 0 ID=cds-WP_005772857.1;Parent=gene-NYQ15_RS08700;Dbxref=GenBank:WP_005772857.1;Name=WP_005772857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820708.1;locus_tag=NYQ15_RS08700;product=ornithine cyclodeaminase;protein_id=WP_005772857.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1663837 1664454 . - . ID=gene-NYQ15_RS08705;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=NYQ15_RS08705 NZ_CP103431.1 Protein Homology CDS 1663837 1664454 . - 0 ID=cds-WP_005772856.1;Parent=gene-NYQ15_RS08705;Dbxref=GenBank:WP_005772856.1;Name=WP_005772856.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820709.1;locus_tag=NYQ15_RS08705;product=nicotinamide riboside transporter PnuC;protein_id=WP_005772856.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1664489 1665439 . - . ID=gene-NYQ15_RS08710;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=NYQ15_RS08710 NZ_CP103431.1 Protein Homology CDS 1664489 1665439 . - 0 ID=cds-WP_011996505.1;Parent=gene-NYQ15_RS08710;Dbxref=GenBank:WP_011996505.1;Name=WP_011996505.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820710.2;locus_tag=NYQ15_RS08710;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_011996505.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1665529 1666305 . - . ID=gene-NYQ15_RS08715;Name=NYQ15_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08715 NZ_CP103431.1 Protein Homology CDS 1665529 1666305 . - 0 ID=cds-WP_010958400.1;Parent=gene-NYQ15_RS08715;Dbxref=GenBank:WP_010958400.1;Name=WP_010958400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820711.1;locus_tag=NYQ15_RS08715;product=phosphoserine phosphatase;protein_id=WP_010958400.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1666376 1667245 . + . ID=gene-NYQ15_RS08720;Name=NYQ15_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08720 NZ_CP103431.1 Protein Homology CDS 1666376 1667245 . + 0 ID=cds-WP_259430960.1;Parent=gene-NYQ15_RS08720;Dbxref=GenBank:WP_259430960.1;Name=WP_259430960.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF037979.1;locus_tag=NYQ15_RS08720;product=sodium-dependent transporter;protein_id=WP_259430960.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1667278 1667727 . + . ID=gene-NYQ15_RS08725;Name=NYQ15_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08725 NZ_CP103431.1 Protein Homology CDS 1667278 1667727 . + 0 ID=cds-WP_250637149.1;Parent=gene-NYQ15_RS08725;Dbxref=GenBank:WP_250637149.1;Name=WP_250637149.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012435.5;locus_tag=NYQ15_RS08725;product=hypothetical protein;protein_id=WP_250637149.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1667727 1668893 . + . ID=gene-NYQ15_RS08730;Name=NYQ15_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08730 NZ_CP103431.1 Protein Homology CDS 1667727 1668893 . + 0 ID=cds-WP_005772858.1;Parent=gene-NYQ15_RS08730;Dbxref=GenBank:WP_005772858.1;Name=WP_005772858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820712.1;locus_tag=NYQ15_RS08730;product=phosphoglycerate dehydrogenase;protein_id=WP_005772858.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1669036 1670935 . + . ID=gene-NYQ15_RS08735;Name=NYQ15_RS08735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS08735;pseudo=true NZ_CP103431.1 Protein Homology CDS 1669036 1670935 . + 0 ID=cds-NYQ15_RS08735;Parent=gene-NYQ15_RS08735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820713.1;locus_tag=NYQ15_RS08735;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1671034 1671747 . - . ID=gene-NYQ15_RS08740;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=NYQ15_RS08740 NZ_CP103431.1 Protein Homology CDS 1671034 1671747 . - 0 ID=cds-WP_005770451.1;Parent=gene-NYQ15_RS08740;Dbxref=GenBank:WP_005770451.1;Name=WP_005770451.1;Ontology_term=GO:0032297,GO:0016818;gbkey=CDS;gene=hda;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820714.1;locus_tag=NYQ15_RS08740;product=DnaA regulatory inactivator Hda;protein_id=WP_005770451.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1671750 1672895 . - . ID=gene-NYQ15_RS08745;Name=NYQ15_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08745 NZ_CP103431.1 Protein Homology CDS 1671750 1672895 . - 0 ID=cds-WP_010958404.1;Parent=gene-NYQ15_RS08745;Dbxref=GenBank:WP_010958404.1;Name=WP_010958404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820715.2;locus_tag=NYQ15_RS08745;product=DUF2066 domain-containing protein;protein_id=WP_010958404.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1672923 1674014 . + . ID=gene-NYQ15_RS08750;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=NYQ15_RS08750 NZ_CP103431.1 Protein Homology CDS 1672923 1674014 . + 0 ID=cds-WP_080592787.1;Parent=gene-NYQ15_RS08750;Dbxref=GenBank:WP_080592787.1;Name=WP_080592787.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820716.2;locus_tag=NYQ15_RS08750;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_080592787.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1674011 1674658 . + . ID=gene-NYQ15_RS08755;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=NYQ15_RS08755 NZ_CP103431.1 Protein Homology CDS 1674011 1674658 . + 0 ID=cds-WP_005770445.1;Parent=gene-NYQ15_RS08755;Dbxref=GenBank:WP_005770445.1;Name=WP_005770445.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820717.1;locus_tag=NYQ15_RS08755;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_005770445.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1674744 1675082 . + . ID=gene-NYQ15_RS08760;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=NYQ15_RS08760 NZ_CP103431.1 Protein Homology CDS 1674744 1675082 . + 0 ID=cds-WP_259430961.1;Parent=gene-NYQ15_RS08760;Dbxref=GenBank:WP_259430961.1;Name=WP_259430961.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820718.1;locus_tag=NYQ15_RS08760;product=integration host factor subunit beta;protein_id=WP_259430961.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1675048 1675905 . - . ID=gene-NYQ15_RS08765;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=NYQ15_RS08765 NZ_CP103431.1 Protein Homology CDS 1675048 1675905 . - 0 ID=cds-WP_259430962.1;Parent=gene-NYQ15_RS08765;Dbxref=GenBank:WP_259430962.1;Name=WP_259430962.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820719.1;locus_tag=NYQ15_RS08765;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_259430962.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1676174 1677358 . + . ID=gene-NYQ15_RS08770;Name=NYQ15_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08770 NZ_CP103431.1 Protein Homology CDS 1676174 1677358 . + 0 ID=cds-WP_005770438.1;Parent=gene-NYQ15_RS08770;Dbxref=GenBank:WP_005770438.1;Name=WP_005770438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770438.1;locus_tag=NYQ15_RS08770;product=penicillin-binding protein activator;protein_id=WP_005770438.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1677408 1677770 . + . ID=gene-NYQ15_RS08775;Name=NYQ15_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08775 NZ_CP103431.1 Protein Homology CDS 1677408 1677770 . + 0 ID=cds-WP_005772860.1;Parent=gene-NYQ15_RS08775;Dbxref=GenBank:WP_005772860.1;Name=WP_005772860.1;Ontology_term=GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820722.1;locus_tag=NYQ15_RS08775;product=YraN family protein;protein_id=WP_005772860.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1677776 1678375 . + . ID=gene-NYQ15_RS08780;Name=NYQ15_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08780 NZ_CP103431.1 Protein Homology CDS 1677776 1678375 . + 0 ID=cds-WP_005770434.1;Parent=gene-NYQ15_RS08780;Dbxref=GenBank:WP_005770434.1;Name=WP_005770434.1;Ontology_term=GO:1901135,GO:0008968,GO:0097367;gbkey=CDS;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820723.1;locus_tag=NYQ15_RS08780;product=phosphoheptose isomerase;protein_id=WP_005770434.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1678375 1678950 . + . ID=gene-NYQ15_RS08785;Name=NYQ15_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08785 NZ_CP103431.1 Protein Homology CDS 1678375 1678950 . + 0 ID=cds-WP_005772861.1;Parent=gene-NYQ15_RS08785;Dbxref=GenBank:WP_005772861.1;Name=WP_005772861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820724.1;locus_tag=NYQ15_RS08785;product=BON domain-containing protein;protein_id=WP_005772861.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1679360 1680052 . - . ID=gene-NYQ15_RS08790;Name=NYQ15_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08790 NZ_CP103431.1 Protein Homology CDS 1679360 1680052 . - 0 ID=cds-WP_005773030.1;Parent=gene-NYQ15_RS08790;Dbxref=GenBank:WP_005773030.1;Name=WP_005773030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820725.1;locus_tag=NYQ15_RS08790;product=site-2 protease family protein;protein_id=WP_005773030.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1680140 1680544 . - . ID=gene-NYQ15_RS08795;Name=NYQ15_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08795 NZ_CP103431.1 Protein Homology CDS 1680140 1680544 . - 0 ID=cds-WP_012570624.1;Parent=gene-NYQ15_RS08795;Dbxref=GenBank:WP_012570624.1;Name=WP_012570624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820726.2;locus_tag=NYQ15_RS08795;product=ClpXP protease specificity-enhancing factor;protein_id=WP_012570624.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1680546 1681208 . - . ID=gene-NYQ15_RS08800;Name=NYQ15_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08800 NZ_CP103431.1 Protein Homology CDS 1680546 1681208 . - 0 ID=cds-WP_010958413.1;Parent=gene-NYQ15_RS08800;Dbxref=GenBank:WP_010958413.1;Name=WP_010958413.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820727.2;locus_tag=NYQ15_RS08800;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_010958413.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1681239 1681658 . - . ID=gene-NYQ15_RS08805;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=NYQ15_RS08805 NZ_CP103431.1 Protein Homology CDS 1681239 1681658 . - 0 ID=cds-WP_005773029.1;Parent=gene-NYQ15_RS08805;Dbxref=GenBank:WP_005773029.1;Name=WP_005773029.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820728.1;locus_tag=NYQ15_RS08805;product=30S ribosomal protein S9;protein_id=WP_005773029.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1681677 1682105 . - . ID=gene-NYQ15_RS08810;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=NYQ15_RS08810 NZ_CP103431.1 Protein Homology CDS 1681677 1682105 . - 0 ID=cds-WP_005770421.1;Parent=gene-NYQ15_RS08810;Dbxref=GenBank:WP_005770421.1;Name=WP_005770421.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820729.1;locus_tag=NYQ15_RS08810;product=50S ribosomal protein L13;protein_id=WP_005770421.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1682240 1682506 . + . ID=gene-NYQ15_RS08815;Name=NYQ15_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08815 NZ_CP103431.1 Protein Homology CDS 1682240 1682506 . + 0 ID=cds-WP_010958414.1;Parent=gene-NYQ15_RS08815;Dbxref=GenBank:WP_010958414.1;Name=WP_010958414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002333027.1;locus_tag=NYQ15_RS08815;product=hypothetical protein;protein_id=WP_010958414.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1682533 1682784 . + . ID=gene-NYQ15_RS08820;Name=NYQ15_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08820 NZ_CP103431.1 Protein Homology CDS 1682533 1682784 . + 0 ID=cds-WP_230454440.1;Parent=gene-NYQ15_RS08820;Dbxref=GenBank:WP_230454440.1;Name=WP_230454440.1;Ontology_term=GO:0030261,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: protein motif:HMM:NF012442.5;locus_tag=NYQ15_RS08820;product=HU family DNA-binding protein;protein_id=WP_230454440.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1682892 1684154 . + . ID=gene-NYQ15_RS08825;Name=coxDFB5;gbkey=Gene;gene=coxDFB5;gene_biotype=protein_coding;locus_tag=NYQ15_RS08825 NZ_CP103431.1 Protein Homology CDS 1682892 1684154 . + 0 ID=cds-WP_005772846.1;Parent=gene-NYQ15_RS08825;Dbxref=GenBank:WP_005772846.1;Name=WP_005772846.1;gbkey=CDS;gene=coxDFB5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820731.1;locus_tag=NYQ15_RS08825;product=Dot/Icm T4SS effector CoxDFB5;protein_id=WP_005772846.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1684190 1685428 . + . ID=gene-NYQ15_RS08830;Name=NYQ15_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08830 NZ_CP103431.1 Protein Homology CDS 1684190 1685428 . + 0 ID=cds-WP_005770413.1;Parent=gene-NYQ15_RS08830;Dbxref=GenBank:WP_005770413.1;Name=WP_005770413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820732.1;locus_tag=NYQ15_RS08830;product=CBU_1752 family Dot/Icm T4SS effector;protein_id=WP_005770413.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1685598 1685918 . + . ID=gene-NYQ15_RS08835;Name=NYQ15_RS08835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS08835;partial=true;pseudo=true;start_range=.,1685598 NZ_CP103431.1 Protein Homology CDS 1685598 1685918 . + 0 ID=cds-NYQ15_RS08835;Parent=gene-NYQ15_RS08835;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819382.1;locus_tag=NYQ15_RS08835;partial=true;product=DUF4351 domain-containing protein;pseudo=true;start_range=.,1685598;transl_table=11 NZ_CP103431.1 RefSeq gene 1685940 1686536 . - . ID=gene-NYQ15_RS08840;Name=NYQ15_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08840 NZ_CP103431.1 Protein Homology CDS 1685940 1686536 . - 0 ID=cds-WP_005770409.1;Parent=gene-NYQ15_RS08840;Dbxref=GenBank:WP_005770409.1;Name=WP_005770409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820734.1;locus_tag=NYQ15_RS08840;product=CBU_1754 family Dot/Icm T4SS effector;protein_id=WP_005770409.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1686546 1686671 . - . ID=gene-NYQ15_RS08845;Name=NYQ15_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08845 NZ_CP103431.1 Protein Homology CDS 1686546 1686671 . - 0 ID=cds-WP_012570622.1;Parent=gene-NYQ15_RS08845;Dbxref=GenBank:WP_012570622.1;Name=WP_012570622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820735.1;locus_tag=NYQ15_RS08845;product=hypothetical protein;protein_id=WP_012570622.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1686718 1687899 . + . ID=gene-NYQ15_RS08850;Name=NYQ15_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08850 NZ_CP103431.1 Protein Homology CDS 1686718 1687899 . + 0 ID=cds-WP_005772840.1;Parent=gene-NYQ15_RS08850;Dbxref=GenBank:WP_005772840.1;Name=WP_005772840.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820736.1;locus_tag=NYQ15_RS08850;product=multidrug effflux MFS transporter;protein_id=WP_005772840.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1687914 1690468 . - . ID=gene-NYQ15_RS08855;Name=ankM;gbkey=Gene;gene=ankM;gene_biotype=pseudogene;locus_tag=NYQ15_RS08855;pseudo=true NZ_CP103431.1 Protein Homology CDS 1687914 1690468 . - 0 ID=cds-NYQ15_RS08855;Parent=gene-NYQ15_RS08855;Note=frameshifted;gbkey=CDS;gene=ankM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996490.1;locus_tag=NYQ15_RS08855;product=Dot/Icm T4SS effector AnkM;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1692249 1694222 . - . ID=gene-NYQ15_RS08865;Name=NYQ15_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08865 NZ_CP103431.1 Protein Homology CDS 1692249 1694222 . - 0 ID=cds-WP_259430963.1;Parent=gene-NYQ15_RS08865;Dbxref=GenBank:WP_259430963.1;Name=WP_259430963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820741.1;locus_tag=NYQ15_RS08865;product=PAS domain-containing hybrid sensor histidine kinase/response regulator;protein_id=WP_259430963.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1694276 1695658 . - . ID=gene-NYQ15_RS08870;Name=NYQ15_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08870 NZ_CP103431.1 Protein Homology CDS 1694276 1695658 . - 0 ID=cds-WP_259430964.1;Parent=gene-NYQ15_RS08870;Dbxref=GenBank:WP_259430964.1;Name=WP_259430964.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820742.1;locus_tag=NYQ15_RS08870;product=FAD-dependent oxidoreductase;protein_id=WP_259430964.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1695816 1697150 . + . ID=gene-NYQ15_RS08875;Name=NYQ15_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08875 NZ_CP103431.1 Protein Homology CDS 1695816 1697150 . + 0 ID=cds-WP_080592786.1;Parent=gene-NYQ15_RS08875;Dbxref=GenBank:WP_080592786.1;Name=WP_080592786.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820743.2;locus_tag=NYQ15_RS08875;product=ATP-binding protein;protein_id=WP_080592786.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1697174 1697281 . - . ID=gene-NYQ15_RS08880;Name=NYQ15_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08880 NZ_CP103431.1 Protein Homology CDS 1697174 1697281 . - 0 ID=cds-WP_010958426.1;Parent=gene-NYQ15_RS08880;Dbxref=GenBank:WP_010958426.1;Name=WP_010958426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820744.1;locus_tag=NYQ15_RS08880;product=hypothetical protein;protein_id=WP_010958426.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1697280 1697636 . + . ID=gene-NYQ15_RS08885;Name=NYQ15_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08885 NZ_CP103431.1 Protein Homology CDS 1697280 1697636 . + 0 ID=cds-WP_011996487.1;Parent=gene-NYQ15_RS08885;Dbxref=GenBank:WP_011996487.1;Name=WP_011996487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002333030.1;locus_tag=NYQ15_RS08885;product=hypothetical protein;protein_id=WP_011996487.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1697762 1697980 . - . ID=gene-NYQ15_RS08890;Name=NYQ15_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08890 NZ_CP103431.1 Protein Homology CDS 1697762 1697980 . - 0 ID=cds-WP_005770388.1;Parent=gene-NYQ15_RS08890;Dbxref=GenBank:WP_005770388.1;Name=WP_005770388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820745.1;locus_tag=NYQ15_RS08890;product=FeoC-like transcriptional regulator;protein_id=WP_005770388.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1697980 1700430 . - . ID=gene-NYQ15_RS08895;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=NYQ15_RS08895 NZ_CP103431.1 Protein Homology CDS 1697980 1700430 . - 0 ID=cds-WP_039669183.1;Parent=gene-NYQ15_RS08895;Dbxref=GenBank:WP_039669183.1;Name=WP_039669183.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820746.1;locus_tag=NYQ15_RS08895;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_039669183.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1700431 1700700 . - . ID=gene-NYQ15_RS08900;Name=NYQ15_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08900 NZ_CP103431.1 Protein Homology CDS 1700431 1700700 . - 0 ID=cds-WP_010958429.1;Parent=gene-NYQ15_RS08900;Dbxref=GenBank:WP_010958429.1;Name=WP_010958429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820747.2;locus_tag=NYQ15_RS08900;product=FeoA family protein;protein_id=WP_010958429.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1700762 1701223 . - . ID=gene-NYQ15_RS08905;Name=NYQ15_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08905 NZ_CP103431.1 Protein Homology CDS 1700762 1701223 . - 0 ID=cds-WP_005770385.1;Parent=gene-NYQ15_RS08905;Dbxref=GenBank:WP_005770385.1;Name=WP_005770385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820748.1;locus_tag=NYQ15_RS08905;product=hypothetical protein;protein_id=WP_005770385.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1701286 1701903 . - . ID=gene-NYQ15_RS08910;Name=coxH3;gbkey=Gene;gene=coxH3;gene_biotype=protein_coding;locus_tag=NYQ15_RS08910 NZ_CP103431.1 Protein Homology CDS 1701286 1701903 . - 0 ID=cds-WP_005770384.1;Parent=gene-NYQ15_RS08910;Dbxref=GenBank:WP_005770384.1;Name=WP_005770384.1;gbkey=CDS;gene=coxH3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820749.1;locus_tag=NYQ15_RS08910;product=Dot/Icm type IV secretion system effector CoxH3;protein_id=WP_005770384.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1702008 1703324 . - . ID=gene-NYQ15_RS08915;Name=NYQ15_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08915 NZ_CP103431.1 Protein Homology CDS 1702008 1703324 . - 0 ID=cds-WP_012570617.1;Parent=gene-NYQ15_RS08915;Dbxref=GenBank:WP_012570617.1;Name=WP_012570617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820750.2;locus_tag=NYQ15_RS08915;product=AAA-associated domain-containing protein;protein_id=WP_012570617.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1703422 1705167 . - . ID=gene-NYQ15_RS08920;Name=NYQ15_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08920 NZ_CP103431.1 Protein Homology CDS 1703422 1705167 . - 0 ID=cds-WP_005772661.1;Parent=gene-NYQ15_RS08920;Dbxref=GenBank:WP_005772661.1;Name=WP_005772661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820751.1;locus_tag=NYQ15_RS08920;product=ABC transporter permease subunit;protein_id=WP_005772661.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1705402 1706019 . - . ID=gene-NYQ15_RS08925;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=NYQ15_RS08925 NZ_CP103431.1 Protein Homology CDS 1705402 1706019 . - 0 ID=cds-WP_005772651.1;Parent=gene-NYQ15_RS08925;Dbxref=GenBank:WP_005772651.1;Name=WP_005772651.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820752.1;locus_tag=NYQ15_RS08925;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_005772651.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1706161 1706670 . + . ID=gene-NYQ15_RS08930;Name=NYQ15_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08930 NZ_CP103431.1 Protein Homology CDS 1706161 1706670 . + 0 ID=cds-WP_011996482.1;Parent=gene-NYQ15_RS08930;Dbxref=GenBank:WP_011996482.1;Name=WP_011996482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996482.1;locus_tag=NYQ15_RS08930;product=SEL1-like repeat protein;protein_id=WP_011996482.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1706841 1707759 . + . ID=gene-NYQ15_RS08935;Name=NYQ15_RS08935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS08935;pseudo=true NZ_CP103431.1 Protein Homology CDS 1706841 1707759 . + 0 ID=cds-NYQ15_RS08935;Parent=gene-NYQ15_RS08935;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770376.1;locus_tag=NYQ15_RS08935;product=CbuK_0231 family Dot/Icm T4SS effector;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1707774 1707958 . - . ID=gene-NYQ15_RS08940;Name=NYQ15_RS08940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS08940;pseudo=true NZ_CP103431.1 Protein Homology CDS 1707774 1707958 . - 0 ID=cds-NYQ15_RS08940;Parent=gene-NYQ15_RS08940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820757.1;locus_tag=NYQ15_RS08940;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1708022 1709113 . - . ID=gene-NYQ15_RS08945;Name=fba;gbkey=Gene;gene=fba;gene_biotype=protein_coding;locus_tag=NYQ15_RS08945 NZ_CP103431.1 Protein Homology CDS 1708022 1709113 . - 0 ID=cds-WP_005770375.1;Parent=gene-NYQ15_RS08945;Dbxref=GenBank:WP_005770375.1;Name=WP_005770375.1;Note=catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle%2C glycolysis%2C and/or gluconeogenesis;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;gene=fba;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820758.1;locus_tag=NYQ15_RS08945;product=class II fructose-bisphosphate aldolase;protein_id=WP_005770375.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1709176 1709275 . + . ID=gene-NYQ15_RS10610;Name=NYQ15_RS10610;end_range=1709275,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS10610;partial=true;pseudo=true NZ_CP103431.1 Protein Homology CDS 1709176 1709275 . + 0 ID=cds-NYQ15_RS10610;Parent=gene-NYQ15_RS10610;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1709275,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820613.2;locus_tag=NYQ15_RS10610;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1709350 1710939 . + . ID=gene-NYQ15_RS08950;Name=NYQ15_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08950 NZ_CP103431.1 Protein Homology CDS 1709350 1710939 . + 0 ID=cds-WP_012570578.1;Parent=gene-NYQ15_RS08950;Dbxref=GenBank:WP_012570578.1;Name=WP_012570578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820760.2;locus_tag=NYQ15_RS08950;product=hypothetical protein;protein_id=WP_012570578.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1710943 1712397 . - . ID=gene-NYQ15_RS08955;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=NYQ15_RS08955 NZ_CP103431.1 Protein Homology CDS 1710943 1712397 . - 0 ID=cds-WP_098953235.1;Parent=gene-NYQ15_RS08955;Dbxref=GenBank:WP_098953235.1;Name=WP_098953235.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: protein motif:HMM:NF004978.0;locus_tag=NYQ15_RS08955;product=pyruvate kinase;protein_id=WP_098953235.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1712384 1713598 . - . ID=gene-NYQ15_RS08960;Name=NYQ15_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08960 NZ_CP103431.1 Protein Homology CDS 1712384 1713598 . - 0 ID=cds-WP_010958437.1;Parent=gene-NYQ15_RS08960;Dbxref=GenBank:WP_010958437.1;Name=WP_010958437.1;Ontology_term=GO:0006096,GO:0004618,GO:0005524,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphoglycerate kinase activity|0004618||IEA,ATP binding|0005524||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820762.2;locus_tag=NYQ15_RS08960;product=phosphoglycerate kinase;protein_id=WP_010958437.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1713670 1714674 . - . ID=gene-NYQ15_RS08965;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=NYQ15_RS08965 NZ_CP103431.1 Protein Homology CDS 1713670 1714674 . - 0 ID=cds-WP_005770078.1;Parent=gene-NYQ15_RS08965;Dbxref=GenBank:WP_005770078.1;Name=WP_005770078.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820763.1;locus_tag=NYQ15_RS08965;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_005770078.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1714689 1716707 . - . ID=gene-NYQ15_RS08970;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=NYQ15_RS08970 NZ_CP103431.1 Protein Homology CDS 1714689 1716707 . - 0 ID=cds-WP_259411687.1;Parent=gene-NYQ15_RS08970;Dbxref=GenBank:WP_259411687.1;Name=WP_259411687.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820764.2;locus_tag=NYQ15_RS08970;product=transketolase;protein_id=WP_259411687.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1717088 1717178 . + . ID=gene-NYQ15_RS08975;Name=NYQ15_RS08975;end_range=1717178,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08975;partial=true;start_range=.,1717088 NZ_CP103431.1 Protein Homology CDS 1717088 1717178 . + 2 ID=cds-WP_259431116.1;Parent=gene-NYQ15_RS08975;Dbxref=GenBank:WP_259431116.1;Name=WP_259431116.1;end_range=1717178,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819062.3;locus_tag=NYQ15_RS08975;partial=true;product=hypothetical protein;protein_id=WP_259431116.1;start_range=.,1717088;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1717194 1717394 . + . ID=gene-NYQ15_RS08980;Name=NYQ15_RS08980;end_range=1717394,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS08980;partial=true;pseudo=true;start_range=.,1717194 NZ_CP103431.1 Protein Homology CDS 1717194 1717394 . + 0 ID=cds-NYQ15_RS08980;Parent=gene-NYQ15_RS08980;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1717394,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820075.3;locus_tag=NYQ15_RS08980;partial=true;product=IS110 family transposase;pseudo=true;start_range=.,1717194;transl_table=11 NZ_CP103431.1 RefSeq gene 1718273 1719475 . - . ID=gene-NYQ15_RS08990;Name=NYQ15_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS08990 NZ_CP103431.1 Protein Homology CDS 1718273 1719475 . - 0 ID=cds-WP_259430965.1;Parent=gene-NYQ15_RS08990;Dbxref=GenBank:WP_259430965.1;Name=WP_259430965.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820766.2;locus_tag=NYQ15_RS08990;product=ATP-binding protein;protein_id=WP_259430965.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1719512 1721347 . + . ID=gene-NYQ15_RS08995;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=NYQ15_RS08995 NZ_CP103431.1 Protein Homology CDS 1719512 1721347 . + 0 ID=cds-WP_005772156.1;Parent=gene-NYQ15_RS08995;Dbxref=GenBank:WP_005772156.1;Name=WP_005772156.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820767.1;locus_tag=NYQ15_RS08995;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_005772156.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1721344 1721935 . + . ID=gene-NYQ15_RS09000;Name=NYQ15_RS09000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS09000;pseudo=true NZ_CP103431.1 Protein Homology CDS 1721344 1721935 . + 0 ID=cds-NYQ15_RS09000;Parent=gene-NYQ15_RS09000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820768.2;locus_tag=NYQ15_RS09000;product=ORF6N domain-containing protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1722324 1723190 . - . ID=gene-NYQ15_RS09005;Name=NYQ15_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09005 NZ_CP103431.1 Protein Homology CDS 1722324 1723190 . - 0 ID=cds-WP_005772155.1;Parent=gene-NYQ15_RS09005;Dbxref=GenBank:WP_005772155.1;Name=WP_005772155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820769.1;locus_tag=NYQ15_RS09005;product=CBU_1789 family Dot/Icm type IV secretion system effector;protein_id=WP_005772155.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1723370 1725272 . + . ID=gene-NYQ15_RS09010;Name=NYQ15_RS09010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS09010;pseudo=true NZ_CP103431.1 Protein Homology CDS 1723370 1725272 . + 0 ID=cds-NYQ15_RS09010;Parent=gene-NYQ15_RS09010;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820770.1;locus_tag=NYQ15_RS09010;product=CBU_1790 family Dot/Icm T4SS effector;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1725970 1726491 . - . ID=gene-NYQ15_RS09015;Name=NYQ15_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09015 NZ_CP103431.1 Protein Homology CDS 1725970 1726491 . - 0 ID=cds-WP_052294009.1;Parent=gene-NYQ15_RS09015;Dbxref=GenBank:WP_052294009.1;Name=WP_052294009.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.5;locus_tag=NYQ15_RS09015;product=MFS transporter;protein_id=WP_052294009.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1726596 1727413 . + . ID=gene-NYQ15_RS09020;Name=NYQ15_RS09020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS09020;pseudo=true NZ_CP103431.1 Protein Homology CDS 1726596 1727413 . + 0 ID=cds-NYQ15_RS09020;Parent=gene-NYQ15_RS09020;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820773.2;locus_tag=NYQ15_RS09020;product=CBU_1794 family Dot/Icm T4SS effector;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1727443 1730151 . - . ID=gene-NYQ15_RS09025;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=NYQ15_RS09025 NZ_CP103431.1 Protein Homology CDS 1727443 1730151 . - 0 ID=cds-WP_005770098.1;Parent=gene-NYQ15_RS09025;Dbxref=GenBank:WP_005770098.1;Name=WP_005770098.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820774.2;locus_tag=NYQ15_RS09025;product=DNA polymerase I;protein_id=WP_005770098.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1730202 1731830 . + . ID=gene-NYQ15_RS09030;Name=NYQ15_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09030 NZ_CP103431.1 Protein Homology CDS 1730202 1731830 . + 0 ID=cds-WP_005772168.1;Parent=gene-NYQ15_RS09030;Dbxref=GenBank:WP_005772168.1;Name=WP_005772168.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820775.1;locus_tag=NYQ15_RS09030;product=APC family permease;protein_id=WP_005772168.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1731835 1732275 . + . ID=gene-NYQ15_RS09035;Name=NYQ15_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09035 NZ_CP103431.1 Protein Homology CDS 1731835 1732275 . + 0 ID=cds-WP_005770102.1;Parent=gene-NYQ15_RS09035;Dbxref=GenBank:WP_005770102.1;Name=WP_005770102.1;Ontology_term=GO:0047617;gbkey=CDS;go_function=fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820776.1;locus_tag=NYQ15_RS09035;product=acyl-CoA thioesterase;protein_id=WP_005770102.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1732404 1734347 . + . ID=gene-NYQ15_RS09040;Name=NYQ15_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09040 NZ_CP103431.1 Protein Homology CDS 1732404 1734347 . + 0 ID=cds-WP_005772166.1;Parent=gene-NYQ15_RS09040;Dbxref=GenBank:WP_005772166.1;Name=WP_005772166.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820777.1;locus_tag=NYQ15_RS09040;product=APC family permease;protein_id=WP_005772166.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1734729 1735190 . - . ID=gene-NYQ15_RS09045;Name=NYQ15_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09045 NZ_CP103431.1 Protein Homology CDS 1734729 1735190 . - 0 ID=cds-WP_005770117.1;Parent=gene-NYQ15_RS09045;Dbxref=GenBank:WP_005770117.1;Name=WP_005770117.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820778.1;locus_tag=NYQ15_RS09045;product=GNAT family N-acetyltransferase;protein_id=WP_005770117.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1735187 1735945 . - . ID=gene-NYQ15_RS09050;Name=NYQ15_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09050 NZ_CP103431.1 Protein Homology CDS 1735187 1735945 . - 0 ID=cds-WP_005770119.1;Parent=gene-NYQ15_RS09050;Dbxref=GenBank:WP_005770119.1;Name=WP_005770119.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820779.1;locus_tag=NYQ15_RS09050;product=queuosine precursor transporter;protein_id=WP_005770119.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1735954 1736250 . - . ID=gene-NYQ15_RS09055;Name=NYQ15_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09055 NZ_CP103431.1 Protein Homology CDS 1735954 1736250 . - 0 ID=cds-WP_010958451.1;Parent=gene-NYQ15_RS09055;Dbxref=GenBank:WP_010958451.1;Name=WP_010958451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820780.2;locus_tag=NYQ15_RS09055;product=hypothetical protein;protein_id=WP_010958451.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1736274 1736912 . - . ID=gene-NYQ15_RS09060;Name=NYQ15_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09060 NZ_CP103431.1 Protein Homology CDS 1736274 1736912 . - 0 ID=cds-WP_005770124.1;Parent=gene-NYQ15_RS09060;Dbxref=GenBank:WP_005770124.1;Name=WP_005770124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820781.1;locus_tag=NYQ15_RS09060;product=hypothetical protein;protein_id=WP_005770124.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1737102 1737230 . + . ID=gene-NYQ15_RS09065;Name=NYQ15_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09065 NZ_CP103431.1 Protein Homology CDS 1737102 1737230 . + 0 ID=cds-WP_012570583.1;Parent=gene-NYQ15_RS09065;Dbxref=GenBank:WP_012570583.1;Name=WP_012570583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820782.1;locus_tag=NYQ15_RS09065;product=hypothetical protein;protein_id=WP_012570583.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1737249 1737503 . + . ID=gene-NYQ15_RS09070;Name=NYQ15_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09070 NZ_CP103431.1 Protein Homology CDS 1737249 1737503 . + 0 ID=cds-WP_005772150.1;Parent=gene-NYQ15_RS09070;Dbxref=GenBank:WP_005772150.1;Name=WP_005772150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820783.1;locus_tag=NYQ15_RS09070;product=helix-turn-helix transcriptional regulator;protein_id=WP_005772150.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1737517 1737900 . + . ID=gene-NYQ15_RS09075;Name=NYQ15_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09075 NZ_CP103431.1 Protein Homology CDS 1737517 1737900 . + 0 ID=cds-WP_259430966.1;Parent=gene-NYQ15_RS09075;Dbxref=GenBank:WP_259430966.1;Name=WP_259430966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820784.1;locus_tag=NYQ15_RS09075;product=LuxR family transcriptional regulator;protein_id=WP_259430966.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1737976 1738263 . - . ID=gene-NYQ15_RS09080;Name=NYQ15_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09080 NZ_CP103431.1 Protein Homology CDS 1737976 1738263 . - 0 ID=cds-WP_005772195.1;Parent=gene-NYQ15_RS09080;Dbxref=GenBank:WP_005772195.1;Name=WP_005772195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820785.1;locus_tag=NYQ15_RS09080;product=hypothetical protein;protein_id=WP_005772195.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1738704 1738955 . - . ID=gene-NYQ15_RS09085;Name=NYQ15_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09085 NZ_CP103431.1 GeneMarkS-2+ CDS 1738704 1738955 . - 0 ID=cds-WP_234949166.1;Parent=gene-NYQ15_RS09085;Dbxref=GenBank:WP_234949166.1;Name=WP_234949166.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS09085;product=hypothetical protein;protein_id=WP_234949166.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1738970 1739179 . - . ID=gene-NYQ15_RS09090;Name=NYQ15_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09090 NZ_CP103431.1 Protein Homology CDS 1738970 1739179 . - 0 ID=cds-WP_012220807.1;Parent=gene-NYQ15_RS09090;Dbxref=GenBank:WP_012220807.1;Name=WP_012220807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220807.1;locus_tag=NYQ15_RS09090;product=hypothetical protein;protein_id=WP_012220807.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1739384 1740577 . - . ID=gene-NYQ15_RS09095;Name=NYQ15_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09095 NZ_CP103431.1 Protein Homology CDS 1739384 1740577 . - 0 ID=cds-WP_259430967.1;Parent=gene-NYQ15_RS09095;Dbxref=GenBank:WP_259430967.1;Name=WP_259430967.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820787.1;locus_tag=NYQ15_RS09095;product=ABC transporter permease;protein_id=WP_259430967.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1740588 1741253 . - . ID=gene-NYQ15_RS09100;Name=NYQ15_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09100 NZ_CP103431.1 Protein Homology CDS 1740588 1741253 . - 0 ID=cds-WP_005770141.1;Parent=gene-NYQ15_RS09100;Dbxref=GenBank:WP_005770141.1;Name=WP_005770141.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820788.1;locus_tag=NYQ15_RS09100;product=ABC transporter ATP-binding protein;protein_id=WP_005770141.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1741246 1742421 . - . ID=gene-NYQ15_RS09105;Name=NYQ15_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09105 NZ_CP103431.1 Protein Homology CDS 1741246 1742421 . - 0 ID=cds-WP_005770142.1;Parent=gene-NYQ15_RS09105;Dbxref=GenBank:WP_005770142.1;Name=WP_005770142.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820789.1;locus_tag=NYQ15_RS09105;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_005770142.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1742424 1743947 . - . ID=gene-NYQ15_RS09110;Name=NYQ15_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09110 NZ_CP103431.1 Protein Homology CDS 1742424 1743947 . - 0 ID=cds-WP_005770144.1;Parent=gene-NYQ15_RS09110;Dbxref=GenBank:WP_005770144.1;Name=WP_005770144.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820790.1;locus_tag=NYQ15_RS09110;product=TolC family protein;protein_id=WP_005770144.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1744014 1745141 . + . ID=gene-NYQ15_RS09115;Name=NYQ15_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09115 NZ_CP103431.1 Protein Homology CDS 1744014 1745141 . + 0 ID=cds-WP_080592731.1;Parent=gene-NYQ15_RS09115;Dbxref=GenBank:WP_080592731.1;Name=WP_080592731.1;Ontology_term=GO:0008615,GO:0033711,GO:0070403;gbkey=CDS;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,NAD+ binding|0070403||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820791.1;locus_tag=NYQ15_RS09115;product=4-phosphoerythronate dehydrogenase;protein_id=WP_080592731.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1745122 1745250 . + . ID=gene-NYQ15_RS09120;Name=NYQ15_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09120 NZ_CP103431.1 Protein Homology CDS 1745122 1745250 . + 0 ID=cds-WP_005770146.1;Parent=gene-NYQ15_RS09120;Dbxref=GenBank:WP_005770146.1;Name=WP_005770146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820792.1;locus_tag=NYQ15_RS09120;product=hypothetical protein;protein_id=WP_005770146.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1745287 1746000 . + . ID=gene-NYQ15_RS09125;Name=NYQ15_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09125 NZ_CP103431.1 Protein Homology CDS 1745287 1746000 . + 0 ID=cds-WP_010958460.1;Parent=gene-NYQ15_RS09125;Dbxref=GenBank:WP_010958460.1;Name=WP_010958460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820793.1;locus_tag=NYQ15_RS09125;product=outer membrane beta-barrel protein;protein_id=WP_010958460.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1746148 1748136 . - . ID=gene-NYQ15_RS09135;Name=NYQ15_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09135 NZ_CP103431.1 Protein Homology CDS 1746148 1748136 . - 0 ID=cds-WP_259430968.1;Parent=gene-NYQ15_RS09135;Dbxref=GenBank:WP_259430968.1;Name=WP_259430968.1;Ontology_term=GO:0006260,GO:0032508,GO:0003678;gbkey=CDS;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA duplex unwinding|0032508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820794.1;locus_tag=NYQ15_RS09135;product=primosomal protein N';protein_id=WP_259430968.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1748208 1748774 . + . ID=gene-NYQ15_RS09140;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=NYQ15_RS09140 NZ_CP103431.1 Protein Homology CDS 1748208 1748774 . + 0 ID=cds-WP_005772139.1;Parent=gene-NYQ15_RS09140;Dbxref=GenBank:WP_005772139.1;Name=WP_005772139.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820795.1;locus_tag=NYQ15_RS09140;product=elongation factor P;protein_id=WP_005772139.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1748779 1749744 . + . ID=gene-NYQ15_RS09145;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=NYQ15_RS09145 NZ_CP103431.1 Protein Homology CDS 1748779 1749744 . + 0 ID=cds-WP_005770152.1;Parent=gene-NYQ15_RS09145;Dbxref=GenBank:WP_005770152.1;Name=WP_005770152.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820796.1;locus_tag=NYQ15_RS09145;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_005770152.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1749965 1751410 . + . ID=gene-NYQ15_RS09150;Name=NYQ15_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09150 NZ_CP103431.1 Protein Homology CDS 1749965 1751410 . + 0 ID=cds-WP_005772145.1;Parent=gene-NYQ15_RS09150;Dbxref=GenBank:WP_005772145.1;Name=WP_005772145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820797.1;locus_tag=NYQ15_RS09150;product=CBU_1818 family Dot/Icm T4SS effector;protein_id=WP_005772145.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1751463 1752596 . + . ID=gene-NYQ15_RS09155;Name=NYQ15_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09155 NZ_CP103431.1 Protein Homology CDS 1751463 1752596 . + 0 ID=cds-WP_098953079.1;Parent=gene-NYQ15_RS09155;Dbxref=GenBank:WP_098953079.1;Name=WP_098953079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820798.1;locus_tag=NYQ15_RS09155;product=CBU_1819 family Dot/Icm T4SS effector;protein_id=WP_098953079.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1752613 1753137 . - . ID=gene-NYQ15_RS09160;Name=NYQ15_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09160 NZ_CP103431.1 Protein Homology CDS 1752613 1753137 . - 0 ID=cds-WP_010958464.1;Parent=gene-NYQ15_RS09160;Dbxref=GenBank:WP_010958464.1;Name=WP_010958464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820799.1;locus_tag=NYQ15_RS09160;product=DUF6036 family nucleotidyltransferase;protein_id=WP_010958464.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1753140 1753637 . - . ID=gene-NYQ15_RS09165;Name=NYQ15_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09165 NZ_CP103431.1 Protein Homology CDS 1753140 1753637 . - 0 ID=cds-WP_005770158.1;Parent=gene-NYQ15_RS09165;Dbxref=GenBank:WP_005770158.1;Name=WP_005770158.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820800.1;locus_tag=NYQ15_RS09165;product=plasmid mobilization protein;protein_id=WP_005770158.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1753753 1754343 . - . ID=gene-NYQ15_RS09170;Name=NYQ15_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09170 NZ_CP103431.1 Protein Homology CDS 1753753 1754343 . - 0 ID=cds-WP_080592730.1;Parent=gene-NYQ15_RS09170;Dbxref=GenBank:WP_080592730.1;Name=WP_080592730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820801.2;locus_tag=NYQ15_RS09170;product=superoxide dismutase family protein;protein_id=WP_080592730.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1754403 1755451 . + . ID=gene-NYQ15_RS09175;Name=coxH4;gbkey=Gene;gene=coxH4;gene_biotype=pseudogene;locus_tag=NYQ15_RS09175;pseudo=true NZ_CP103431.1 Protein Homology CDS 1754403 1755451 . + 0 ID=cds-NYQ15_RS09175;Parent=gene-NYQ15_RS09175;Note=frameshifted;gbkey=CDS;gene=coxH4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820802.1;locus_tag=NYQ15_RS09175;product=Dot/Icm T4SS effector CoxH4;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1755753 1756100 . + . ID=gene-NYQ15_RS09180;Name=coxDFB6;gbkey=Gene;gene=coxDFB6;gene_biotype=protein_coding;locus_tag=NYQ15_RS09180 NZ_CP103431.1 Protein Homology CDS 1755753 1756100 . + 0 ID=cds-WP_005772185.1;Parent=gene-NYQ15_RS09180;Dbxref=GenBank:WP_005772185.1;Name=WP_005772185.1;gbkey=CDS;gene=coxDFB6;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820804.1;locus_tag=NYQ15_RS09180;product=Dot/Icm T4SS effector CoxDFB6;protein_id=WP_005772185.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1756105 1756953 . - . ID=gene-NYQ15_RS09185;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=NYQ15_RS09185 NZ_CP103431.1 Protein Homology CDS 1756105 1756953 . - 0 ID=cds-WP_005770170.1;Parent=gene-NYQ15_RS09185;Dbxref=GenBank:WP_005770170.1;Name=WP_005770170.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820805.1;locus_tag=NYQ15_RS09185;product=archaetidylserine decarboxylase;protein_id=WP_005770170.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1756960 1758105 . + . ID=gene-NYQ15_RS09190;Name=NYQ15_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09190 NZ_CP103431.1 Protein Homology CDS 1756960 1758105 . + 0 ID=cds-WP_011996382.1;Parent=gene-NYQ15_RS09190;Dbxref=GenBank:WP_011996382.1;Name=WP_011996382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820806.2;locus_tag=NYQ15_RS09190;product=CCA-adding protein;protein_id=WP_011996382.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1758139 1759392 . - . ID=gene-NYQ15_RS09195;Name=NYQ15_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09195 NZ_CP103431.1 Protein Homology CDS 1758139 1759392 . - 0 ID=cds-WP_010958470.1;Parent=gene-NYQ15_RS09195;Dbxref=GenBank:WP_010958470.1;Name=WP_010958470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820807.2;locus_tag=NYQ15_RS09195;product=class I SAM-dependent methyltransferase;protein_id=WP_010958470.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1759399 1760031 . + . ID=gene-NYQ15_RS09200;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=NYQ15_RS09200 NZ_CP103431.1 Protein Homology CDS 1759399 1760031 . + 0 ID=cds-WP_005770176.1;Parent=gene-NYQ15_RS09200;Dbxref=GenBank:WP_005770176.1;Name=WP_005770176.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820808.1;locus_tag=NYQ15_RS09200;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_005770176.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1760110 1760184 . + . ID=gene-NYQ15_RS09205;Name=NYQ15_RS09205;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS09205 NZ_CP103431.1 tRNAscan-SE tRNA 1760110 1760184 . + . ID=rna-NYQ15_RS09205;Parent=gene-NYQ15_RS09205;anticodon=(pos:1760142..1760144);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS09205;product=tRNA-Gln NZ_CP103431.1 tRNAscan-SE exon 1760110 1760184 . + . ID=exon-NYQ15_RS09205-1;Parent=rna-NYQ15_RS09205;anticodon=(pos:1760142..1760144);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS09205;product=tRNA-Gln NZ_CP103431.1 RefSeq gene 1760206 1761165 . + . ID=gene-NYQ15_RS09210;Name=NYQ15_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09210 NZ_CP103431.1 Protein Homology CDS 1760206 1761165 . + 0 ID=cds-WP_005770178.1;Parent=gene-NYQ15_RS09210;Dbxref=GenBank:WP_005770178.1;Name=WP_005770178.1;Ontology_term=GO:0006015,GO:0009156,GO:0009165,GO:0016310,GO:0000287,GO:0004749,GO:0005524,GO:0016301,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,ribose phosphate diphosphokinase activity|0004749||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA,ribonucleoside monophosphate biosynthetic process|0009156||IEA,nucleotide biosynthetic process|0009165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820809.1;locus_tag=NYQ15_RS09210;product=ribose-phosphate pyrophosphokinase;protein_id=WP_005770178.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1761170 1762618 . + . ID=gene-NYQ15_RS09215;Name=NYQ15_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09215 NZ_CP103431.1 Protein Homology CDS 1761170 1762618 . + 0 ID=cds-WP_259430969.1;Parent=gene-NYQ15_RS09215;Dbxref=GenBank:WP_259430969.1;Name=WP_259430969.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820810.1;locus_tag=NYQ15_RS09215;product=glycosyltransferase family 39 protein;protein_id=WP_259430969.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1763225 1763887 . - . ID=gene-NYQ15_RS09220;Name=NYQ15_RS09220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS09220;partial=true;pseudo=true;start_range=.,1763225 NZ_CP103431.1 Protein Homology CDS 1763225 1763887 . - 0 ID=cds-NYQ15_RS09220;Parent=gene-NYQ15_RS09220;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024629.5;locus_tag=NYQ15_RS09220;partial=true;product=glycosyltransferase family 39 protein;pseudo=true;start_range=.,1763225;transl_table=11 NZ_CP103431.1 RefSeq gene 1763823 1763960 . - . ID=gene-NYQ15_RS09225;Name=NYQ15_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09225 NZ_CP103431.1 Protein Homology CDS 1763823 1763960 . - 0 ID=cds-WP_011996386.1;Parent=gene-NYQ15_RS09225;Dbxref=GenBank:WP_011996386.1;Name=WP_011996386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820812.1;locus_tag=NYQ15_RS09225;product=hypothetical protein;protein_id=WP_011996386.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1763990 1764904 . + . ID=gene-NYQ15_RS09230;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=NYQ15_RS09230 NZ_CP103431.1 Protein Homology CDS 1763990 1764904 . + 0 ID=cds-WP_005770192.1;Parent=gene-NYQ15_RS09230;Dbxref=GenBank:WP_005770192.1;Name=WP_005770192.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820813.1;locus_tag=NYQ15_RS09230;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_005770192.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1765250 1766629 . - . ID=gene-NYQ15_RS09240;Name=NYQ15_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09240 NZ_CP103431.1 Protein Homology CDS 1765250 1766629 . - 0 ID=cds-WP_005772180.1;Parent=gene-NYQ15_RS09240;Dbxref=GenBank:WP_005772180.1;Name=WP_005772180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820814.1;locus_tag=NYQ15_RS09240;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_005772180.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1766631 1767887 . - . ID=gene-NYQ15_RS09245;Name=NYQ15_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09245 NZ_CP103431.1 Protein Homology CDS 1766631 1767887 . - 0 ID=cds-WP_005770198.1;Parent=gene-NYQ15_RS09245;Dbxref=GenBank:WP_005770198.1;Name=WP_005770198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820815.1;locus_tag=NYQ15_RS09245;product=homoserine dehydrogenase;protein_id=WP_005770198.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1767901 1768941 . - . ID=gene-NYQ15_RS09250;Name=NYQ15_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09250 NZ_CP103431.1 Protein Homology CDS 1767901 1768941 . - 0 ID=cds-WP_012570594.1;Parent=gene-NYQ15_RS09250;Dbxref=GenBank:WP_012570594.1;Name=WP_012570594.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820816.2;locus_tag=NYQ15_RS09250;product=NAD(P)-dependent oxidoreductase;protein_id=WP_012570594.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1768938 1769507 . - . ID=gene-NYQ15_RS09255;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=NYQ15_RS09255 NZ_CP103431.1 Protein Homology CDS 1768938 1769507 . - 0 ID=cds-WP_005772173.1;Parent=gene-NYQ15_RS09255;Dbxref=GenBank:WP_005772173.1;Name=WP_005772173.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820817.1;locus_tag=NYQ15_RS09255;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_005772173.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1769517 1770743 . - . ID=gene-NYQ15_RS09260;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=NYQ15_RS09260 NZ_CP103431.1 Protein Homology CDS 1769517 1770743 . - 0 ID=cds-WP_005770204.1;Parent=gene-NYQ15_RS09260;Dbxref=GenBank:WP_005770204.1;Name=WP_005770204.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820818.1;locus_tag=NYQ15_RS09260;product=L-2-hydroxyglutarate oxidase;protein_id=WP_005770204.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1770893 1771627 . + . ID=gene-NYQ15_RS09265;Name=NYQ15_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09265 NZ_CP103431.1 Protein Homology CDS 1770893 1771627 . + 0 ID=cds-WP_005770208.1;Parent=gene-NYQ15_RS09265;Dbxref=GenBank:WP_005770208.1;Name=WP_005770208.1;Ontology_term=GO:0006412,GO:0003735,GO:0008097;gbkey=CDS;go_function=structural constituent of ribosome|0003735||IEA,5S rRNA binding|0008097||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820819.1;locus_tag=NYQ15_RS09265;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_005770208.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1771634 1772197 . + . ID=gene-NYQ15_RS09270;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=NYQ15_RS09270 NZ_CP103431.1 Protein Homology CDS 1771634 1772197 . + 0 ID=cds-WP_005770211.1;Parent=gene-NYQ15_RS09270;Dbxref=GenBank:WP_005770211.1;Name=WP_005770211.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820820.1;locus_tag=NYQ15_RS09270;product=aminoacyl-tRNA hydrolase;protein_id=WP_005770211.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1772242 1773333 . + . ID=gene-NYQ15_RS09275;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=NYQ15_RS09275 NZ_CP103431.1 Protein Homology CDS 1772242 1773333 . + 0 ID=cds-WP_259431117.1;Parent=gene-NYQ15_RS09275;Dbxref=GenBank:WP_259431117.1;Name=WP_259431117.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820821.3;locus_tag=NYQ15_RS09275;product=redox-regulated ATPase YchF;protein_id=WP_259431117.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1773337 1773741 . + . ID=gene-NYQ15_RS09280;Name=NYQ15_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09280 NZ_CP103431.1 Protein Homology CDS 1773337 1773741 . + 0 ID=cds-WP_012570596.1;Parent=gene-NYQ15_RS09280;Dbxref=GenBank:WP_012570596.1;Name=WP_012570596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820822.2;locus_tag=NYQ15_RS09280;product=hypothetical protein;protein_id=WP_012570596.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1773807 1773880 . + . ID=gene-NYQ15_RS09285;Name=NYQ15_RS09285;gbkey=Gene;gene_biotype=tRNA;locus_tag=NYQ15_RS09285 NZ_CP103431.1 tRNAscan-SE tRNA 1773807 1773880 . + . ID=rna-NYQ15_RS09285;Parent=gene-NYQ15_RS09285;anticodon=(pos:1773841..1773843);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS09285;product=tRNA-Met NZ_CP103431.1 tRNAscan-SE exon 1773807 1773880 . + . ID=exon-NYQ15_RS09285-1;Parent=rna-NYQ15_RS09285;anticodon=(pos:1773841..1773843);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=NYQ15_RS09285;product=tRNA-Met NZ_CP103431.1 RefSeq gene 1774540 1775151 . + . ID=gene-NYQ15_RS09295;Name=NYQ15_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09295 NZ_CP103431.1 Protein Homology CDS 1774540 1775151 . + 0 ID=cds-WP_005772143.1;Parent=gene-NYQ15_RS09295;Dbxref=GenBank:WP_005772143.1;Name=WP_005772143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820823.1;locus_tag=NYQ15_RS09295;product=hypothetical protein;protein_id=WP_005772143.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1775264 1775860 . - . ID=gene-NYQ15_RS09300;Name=NYQ15_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09300 NZ_CP103431.1 Protein Homology CDS 1775264 1775860 . - 0 ID=cds-WP_012569658.1;Parent=gene-NYQ15_RS09300;Dbxref=GenBank:WP_012569658.1;Name=WP_012569658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017252934.1;locus_tag=NYQ15_RS09300;product=DUF2076 domain-containing protein;protein_id=WP_012569658.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1775847 1776092 . - . ID=gene-NYQ15_RS09305;Name=NYQ15_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09305 NZ_CP103431.1 Protein Homology CDS 1775847 1776092 . - 0 ID=cds-WP_005770224.1;Parent=gene-NYQ15_RS09305;Dbxref=GenBank:WP_005770224.1;Name=WP_005770224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820825.1;locus_tag=NYQ15_RS09305;product=hypothetical protein;protein_id=WP_005770224.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1776253 1777071 . + . ID=gene-NYQ15_RS09310;Name=NYQ15_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09310 NZ_CP103431.1 GeneMarkS-2+ CDS 1776253 1777071 . + 0 ID=cds-WP_259430970.1;Parent=gene-NYQ15_RS09310;Dbxref=GenBank:WP_259430970.1;Name=WP_259430970.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS09310;product=hypothetical protein;protein_id=WP_259430970.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1777135 1777629 . + . ID=gene-NYQ15_RS09315;Name=NYQ15_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09315 NZ_CP103431.1 GeneMarkS-2+ CDS 1777135 1777629 . + 0 ID=cds-WP_039669157.1;Parent=gene-NYQ15_RS09315;Dbxref=GenBank:WP_039669157.1;Name=WP_039669157.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS09315;product=hypothetical protein;protein_id=WP_039669157.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1777698 1778060 . + . ID=gene-NYQ15_RS09320;Name=NYQ15_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09320 NZ_CP103431.1 Protein Homology CDS 1777698 1778060 . + 0 ID=cds-WP_011996397.1;Parent=gene-NYQ15_RS09320;Dbxref=GenBank:WP_011996397.1;Name=WP_011996397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002333035.1;locus_tag=NYQ15_RS09320;product=hypothetical protein;protein_id=WP_011996397.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1778195 1778395 . - . ID=gene-NYQ15_RS09325;Name=NYQ15_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09325 NZ_CP103431.1 Protein Homology CDS 1778195 1778395 . - 0 ID=cds-WP_010958485.1;Parent=gene-NYQ15_RS09325;Dbxref=GenBank:WP_010958485.1;Name=WP_010958485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820826.1;locus_tag=NYQ15_RS09325;product=hypothetical protein;protein_id=WP_010958485.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1778613 1779098 . - . ID=gene-NYQ15_RS09330;Name=NYQ15_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09330 NZ_CP103431.1 Protein Homology CDS 1778613 1779098 . - 0 ID=cds-WP_011996398.1;Parent=gene-NYQ15_RS09330;Dbxref=GenBank:WP_011996398.1;Name=WP_011996398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820827.2;locus_tag=NYQ15_RS09330;product=YjdF family protein;protein_id=WP_011996398.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1779313 1781109 . + . ID=gene-NYQ15_RS09335;Name=NYQ15_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09335 NZ_CP103431.1 Protein Homology CDS 1779313 1781109 . + 0 ID=cds-WP_259430971.1;Parent=gene-NYQ15_RS09335;Dbxref=GenBank:WP_259430971.1;Name=WP_259430971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820828.2;locus_tag=NYQ15_RS09335;product=hypothetical protein;protein_id=WP_259430971.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1781102 1782496 . + . ID=gene-NYQ15_RS09340;Name=NYQ15_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09340 NZ_CP103431.1 Protein Homology CDS 1781102 1782496 . + 0 ID=cds-WP_005770236.1;Parent=gene-NYQ15_RS09340;Dbxref=GenBank:WP_005770236.1;Name=WP_005770236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820829.1;locus_tag=NYQ15_RS09340;product=glycosyltransferase family 39 protein;protein_id=WP_005770236.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1782474 1782923 . - . ID=gene-NYQ15_RS09345;Name=NYQ15_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09345 NZ_CP103431.1 Protein Homology CDS 1782474 1782923 . - 0 ID=cds-WP_005772970.1;Parent=gene-NYQ15_RS09345;Dbxref=GenBank:WP_005772970.1;Name=WP_005772970.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820830.1;locus_tag=NYQ15_RS09345;product=GtrA family protein;protein_id=WP_005772970.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1783006 1783314 . - . ID=gene-NYQ15_RS09350;Name=NYQ15_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09350 NZ_CP103431.1 Protein Homology CDS 1783006 1783314 . - 0 ID=cds-WP_010958490.1;Parent=gene-NYQ15_RS09350;Dbxref=GenBank:WP_010958490.1;Name=WP_010958490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820831.2;locus_tag=NYQ15_RS09350;product=hypothetical protein;protein_id=WP_010958490.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1783706 1784053 . - . ID=gene-NYQ15_RS09355;Name=NYQ15_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09355 NZ_CP103431.1 Protein Homology CDS 1783706 1784053 . - 0 ID=cds-WP_011996401.1;Parent=gene-NYQ15_RS09355;Dbxref=GenBank:WP_011996401.1;Name=WP_011996401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820832.2;locus_tag=NYQ15_RS09355;product=tetratricopeptide repeat protein;protein_id=WP_011996401.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1784080 1785219 . - . ID=gene-NYQ15_RS09360;Name=NYQ15_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09360 NZ_CP103431.1 Protein Homology CDS 1784080 1785219 . - 0 ID=cds-WP_098953081.1;Parent=gene-NYQ15_RS09360;Dbxref=GenBank:WP_098953081.1;Name=WP_098953081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820833.2;locus_tag=NYQ15_RS09360;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_098953081.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1785268 1786859 . - . ID=gene-NYQ15_RS09365;Name=NYQ15_RS09365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS09365;pseudo=true NZ_CP103431.1 Protein Homology CDS 1785268 1786859 . - 0 ID=cds-NYQ15_RS09365;Parent=gene-NYQ15_RS09365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820834.1;locus_tag=NYQ15_RS09365;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1786980 1788377 . - . ID=gene-NYQ15_RS09370;Name=NYQ15_RS09370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS09370;pseudo=true NZ_CP103431.1 Protein Homology CDS 1786980 1788377 . - 0 ID=cds-NYQ15_RS09370;Parent=gene-NYQ15_RS09370;Note=internal stop;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820835.1;locus_tag=NYQ15_RS09370;product=ABC transporter permease;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1788388 1789398 . - . ID=gene-NYQ15_RS09375;Name=NYQ15_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09375 NZ_CP103431.1 Protein Homology CDS 1788388 1789398 . - 0 ID=cds-WP_259430972.1;Parent=gene-NYQ15_RS09375;Dbxref=GenBank:WP_259430972.1;Name=WP_259430972.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820836.2;locus_tag=NYQ15_RS09375;product=ABC transporter permease;protein_id=WP_259430972.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1789423 1791657 . - . ID=gene-NYQ15_RS09380;Name=NYQ15_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09380 NZ_CP103431.1 Protein Homology CDS 1789423 1791657 . - 0 ID=cds-WP_098953082.1;Parent=gene-NYQ15_RS09380;Dbxref=GenBank:WP_098953082.1;Name=WP_098953082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996405.1;locus_tag=NYQ15_RS09380;product=ABC transporter substrate-binding protein;protein_id=WP_098953082.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1791692 1792720 . + . ID=gene-NYQ15_RS09385;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=NYQ15_RS09385 NZ_CP103431.1 Protein Homology CDS 1791692 1792720 . + 0 ID=cds-WP_005772677.1;Parent=gene-NYQ15_RS09385;Dbxref=GenBank:WP_005772677.1;Name=WP_005772677.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820839.1;locus_tag=NYQ15_RS09385;product=EF-P beta-lysylation protein EpmB;protein_id=WP_005772677.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1792710 1794519 . - . ID=gene-NYQ15_RS09390;Name=NYQ15_RS09390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS09390;pseudo=true NZ_CP103431.1 Protein Homology CDS 1792710 1794519 . - 0 ID=cds-NYQ15_RS09390;Parent=gene-NYQ15_RS09390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820840.1;locus_tag=NYQ15_RS09390;product=CBU_1863 family Dot/Icm T4SS effector;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1794783 1794878 . - . ID=gene-NYQ15_RS09395;Name=NYQ15_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09395 NZ_CP103431.1 Protein Homology CDS 1794783 1794878 . - 0 ID=cds-WP_010958498.1;Parent=gene-NYQ15_RS09395;Dbxref=GenBank:WP_010958498.1;Name=WP_010958498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820841.1;locus_tag=NYQ15_RS09395;product=hypothetical protein;protein_id=WP_010958498.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1794899 1795441 . - . ID=gene-NYQ15_RS09400;Name=NYQ15_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09400 NZ_CP103431.1 Protein Homology CDS 1794899 1795441 . - 0 ID=cds-WP_032074756.1;Parent=gene-NYQ15_RS09400;Dbxref=GenBank:WP_032074756.1;Name=WP_032074756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820842.2;locus_tag=NYQ15_RS09400;product=PH domain-containing protein;protein_id=WP_032074756.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1795444 1797705 . - . ID=gene-NYQ15_RS09405;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=NYQ15_RS09405 NZ_CP103431.1 Protein Homology CDS 1795444 1797705 . - 0 ID=cds-WP_011996407.1;Parent=gene-NYQ15_RS09405;Dbxref=GenBank:WP_011996407.1;Name=WP_011996407.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820843.1;locus_tag=NYQ15_RS09405;product=DNA topoisomerase IV subunit A;protein_id=WP_011996407.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1797748 1797906 . + . ID=gene-NYQ15_RS09410;Name=NYQ15_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09410 NZ_CP103431.1 Protein Homology CDS 1797748 1797906 . + 0 ID=cds-WP_010958501.1;Parent=gene-NYQ15_RS09410;Dbxref=GenBank:WP_010958501.1;Name=WP_010958501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820844.1;locus_tag=NYQ15_RS09410;product=hypothetical protein;protein_id=WP_010958501.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1798278 1798931 . + . ID=gene-NYQ15_RS09420;Name=NYQ15_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09420 NZ_CP103431.1 Protein Homology CDS 1798278 1798931 . + 0 ID=cds-WP_259430973.1;Parent=gene-NYQ15_RS09420;Dbxref=GenBank:WP_259430973.1;Name=WP_259430973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820846.1;locus_tag=NYQ15_RS09420;product=hypothetical protein;protein_id=WP_259430973.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1799218 1799865 . + . ID=gene-NYQ15_RS09425;Name=coq7;gbkey=Gene;gene=coq7;gene_biotype=protein_coding;locus_tag=NYQ15_RS09425 NZ_CP103431.1 Protein Homology CDS 1799218 1799865 . + 0 ID=cds-WP_005770265.1;Parent=gene-NYQ15_RS09425;Dbxref=GenBank:WP_005770265.1;Name=WP_005770265.1;Ontology_term=GO:0006744,GO:0004497;gbkey=CDS;gene=coq7;go_function=monooxygenase activity|0004497||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820847.1;locus_tag=NYQ15_RS09425;product=2-polyprenyl-3-methyl-6-methoxy-1%2C4-benzoquinone monooxygenase;protein_id=WP_005770265.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1799815 1800420 . - . ID=gene-NYQ15_RS09430;Name=NYQ15_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09430 NZ_CP103431.1 Protein Homology CDS 1799815 1800420 . - 0 ID=cds-WP_005770266.1;Parent=gene-NYQ15_RS09430;Dbxref=GenBank:WP_005770266.1;Name=WP_005770266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820848.1;locus_tag=NYQ15_RS09430;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_005770266.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1800401 1801096 . - . ID=gene-NYQ15_RS09435;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=NYQ15_RS09435 NZ_CP103431.1 Protein Homology CDS 1800401 1801096 . - 0 ID=cds-WP_010958506.1;Parent=gene-NYQ15_RS09435;Dbxref=GenBank:WP_010958506.1;Name=WP_010958506.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820849.2;locus_tag=NYQ15_RS09435;product=ribulose-phosphate 3-epimerase;protein_id=WP_010958506.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1801096 1801911 . - . ID=gene-NYQ15_RS09440;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=NYQ15_RS09440 NZ_CP103431.1 Protein Homology CDS 1801096 1801911 . - 0 ID=cds-WP_259430974.1;Parent=gene-NYQ15_RS09440;Dbxref=GenBank:WP_259430974.1;Name=WP_259430974.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820850.1;locus_tag=NYQ15_RS09440;product=co-chaperone DjlA;protein_id=WP_259430974.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1801947 1803254 . + . ID=gene-NYQ15_RS09445;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=NYQ15_RS09445 NZ_CP103431.1 Protein Homology CDS 1801947 1803254 . + 0 ID=cds-WP_005770273.1;Parent=gene-NYQ15_RS09445;Dbxref=GenBank:WP_005770273.1;Name=WP_005770273.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820851.1;locus_tag=NYQ15_RS09445;product=glutamate--cysteine ligase;protein_id=WP_005770273.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1803308 1804273 . + . ID=gene-NYQ15_RS09450;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=NYQ15_RS09450 NZ_CP103431.1 Protein Homology CDS 1803308 1804273 . + 0 ID=cds-WP_259430975.1;Parent=gene-NYQ15_RS09450;Dbxref=GenBank:WP_259430975.1;Name=WP_259430975.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820852.1;locus_tag=NYQ15_RS09450;product=glutathione synthase;protein_id=WP_259430975.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1804680 1805444 . + . ID=gene-NYQ15_RS09455;Name=NYQ15_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09455 NZ_CP103431.1 Protein Homology CDS 1804680 1805444 . + 0 ID=cds-WP_005770277.1;Parent=gene-NYQ15_RS09455;Dbxref=GenBank:WP_005770277.1;Name=WP_005770277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820853.1;locus_tag=NYQ15_RS09455;product=class I SAM-dependent methyltransferase;protein_id=WP_005770277.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1805427 1806710 . - . ID=gene-NYQ15_RS09460;Name=NYQ15_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09460 NZ_CP103431.1 Protein Homology CDS 1805427 1806710 . - 0 ID=cds-WP_005770279.1;Parent=gene-NYQ15_RS09460;Dbxref=GenBank:WP_005770279.1;Name=WP_005770279.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820854.1;locus_tag=NYQ15_RS09460;product=ATP-binding protein;protein_id=WP_005770279.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1806855 1807274 . - . ID=gene-NYQ15_RS09465;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=NYQ15_RS09465 NZ_CP103431.1 Protein Homology CDS 1806855 1807274 . - 0 ID=cds-WP_012569674.1;Parent=gene-NYQ15_RS09465;Dbxref=GenBank:WP_012569674.1;Name=WP_012569674.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820855.1;locus_tag=NYQ15_RS09465;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_012569674.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1807370 1807999 . + . ID=gene-NYQ15_RS09470;Name=NYQ15_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09470 NZ_CP103431.1 Protein Homology CDS 1807370 1807999 . + 0 ID=cds-WP_005770284.1;Parent=gene-NYQ15_RS09470;Dbxref=GenBank:WP_005770284.1;Name=WP_005770284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820856.1;locus_tag=NYQ15_RS09470;product=peptide deformylase;protein_id=WP_005770284.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1807996 1808415 . + . ID=gene-NYQ15_RS09475;Name=NYQ15_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09475 NZ_CP103431.1 Protein Homology CDS 1807996 1808415 . + 0 ID=cds-WP_005770286.1;Parent=gene-NYQ15_RS09475;Dbxref=GenBank:WP_005770286.1;Name=WP_005770286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820857.1;locus_tag=NYQ15_RS09475;product=CopD family protein;protein_id=WP_005770286.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1808412 1808585 . - . ID=gene-NYQ15_RS09480;Name=NYQ15_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09480 NZ_CP103431.1 Protein Homology CDS 1808412 1808585 . - 0 ID=cds-WP_005770288.1;Parent=gene-NYQ15_RS09480;Dbxref=GenBank:WP_005770288.1;Name=WP_005770288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820858.1;locus_tag=NYQ15_RS09480;product=rubredoxin;protein_id=WP_005770288.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1808628 1809935 . + . ID=gene-NYQ15_RS09485;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=NYQ15_RS09485 NZ_CP103431.1 Protein Homology CDS 1808628 1809935 . + 0 ID=cds-WP_005770290.1;Parent=gene-NYQ15_RS09485;Dbxref=GenBank:WP_005770290.1;Name=WP_005770290.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820859.1;locus_tag=NYQ15_RS09485;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_005770290.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1809932 1810486 . + . ID=gene-NYQ15_RS09490;Name=NYQ15_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09490 NZ_CP103431.1 Protein Homology CDS 1809932 1810486 . + 0 ID=cds-WP_005770292.1;Parent=gene-NYQ15_RS09490;Dbxref=GenBank:WP_005770292.1;Name=WP_005770292.1;Ontology_term=GO:0008616,GO:0046872,GO:0070497;gbkey=CDS;go_function=metal ion binding|0046872||IEA,6-carboxy-5%2C6%2C7%2C8-tetrahydropterin synthase activity|0070497||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820860.1;locus_tag=NYQ15_RS09490;product=6-carboxytetrahydropterin synthase;protein_id=WP_005770292.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1810489 1810968 . + . ID=gene-NYQ15_RS09495;Name=NYQ15_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09495 NZ_CP103431.1 Protein Homology CDS 1810489 1810968 . + 0 ID=cds-WP_005772674.1;Parent=gene-NYQ15_RS09495;Dbxref=GenBank:WP_005772674.1;Name=WP_005772674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820861.1;locus_tag=NYQ15_RS09495;product=DUF2165 family protein;protein_id=WP_005772674.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1811035 1811136 . - . ID=gene-NYQ15_RS10615;Name=NYQ15_RS10615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS10615;partial=true;pseudo=true;start_range=.,1811035 NZ_CP103431.1 Protein Homology CDS 1811035 1811136 . - 0 ID=cds-NYQ15_RS10615;Parent=gene-NYQ15_RS10615;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819398.1;locus_tag=NYQ15_RS10615;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1811035;transl_table=11 NZ_CP103431.1 RefSeq gene 1811203 1811343 . - . ID=gene-NYQ15_RS09510;Name=NYQ15_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09510 NZ_CP103431.1 Protein Homology CDS 1811203 1811343 . - 0 ID=cds-WP_005770298.1;Parent=gene-NYQ15_RS09510;Dbxref=GenBank:WP_005770298.1;Name=WP_005770298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820863.1;locus_tag=NYQ15_RS09510;product=hypothetical protein;protein_id=WP_005770298.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1811353 1813734 . - . ID=gene-NYQ15_RS09515;Name=NYQ15_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09515 NZ_CP103431.1 Protein Homology CDS 1811353 1813734 . - 0 ID=cds-WP_098953084.1;Parent=gene-NYQ15_RS09515;Dbxref=GenBank:WP_098953084.1;Name=WP_098953084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820864.1;locus_tag=NYQ15_RS09515;product=penicillin-binding protein 1A;protein_id=WP_098953084.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1813804 1814598 . + . ID=gene-NYQ15_RS09520;Name=pilM;gbkey=Gene;gene=pilM;gene_biotype=protein_coding;locus_tag=NYQ15_RS09520 NZ_CP103431.1 Protein Homology CDS 1813804 1814598 . + 0 ID=cds-WP_005770303.1;Parent=gene-NYQ15_RS09520;Dbxref=GenBank:WP_005770303.1;Name=WP_005770303.1;Ontology_term=GO:0043683,GO:0005524,GO:0046872;gbkey=CDS;gene=pilM;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820865.1;locus_tag=NYQ15_RS09520;product=type IV pilus biogenesis protein PilM;protein_id=WP_005770303.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1814595 1814975 . + . ID=gene-NYQ15_RS09525;Name=NYQ15_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09525 NZ_CP103431.1 GeneMarkS-2+ CDS 1814595 1814975 . + 0 ID=cds-WP_259430976.1;Parent=gene-NYQ15_RS09525;Dbxref=GenBank:WP_259430976.1;Name=WP_259430976.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS09525;product=PilN domain-containing protein;protein_id=WP_259430976.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1815183 1815492 . + . ID=gene-NYQ15_RS09530;Name=pilO;gbkey=Gene;gene=pilO;gene_biotype=pseudogene;locus_tag=NYQ15_RS09530;pseudo=true NZ_CP103431.1 Protein Homology CDS 1815183 1815492 . + 0 ID=cds-NYQ15_RS09530;Parent=gene-NYQ15_RS09530;Note=frameshifted;Ontology_term=GO:0043107,GO:0043683;gbkey=CDS;gene=pilO;go_process=type IV pilus-dependent motility|0043107||IEA,type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820867.1;locus_tag=NYQ15_RS09530;product=type 4a pilus biogenesis protein PilO;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1815473 1816534 . + . ID=gene-NYQ15_RS09535;Name=NYQ15_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09535 NZ_CP103431.1 Protein Homology CDS 1815473 1816534 . + 0 ID=cds-WP_012570606.1;Parent=gene-NYQ15_RS09535;Dbxref=GenBank:WP_012570606.1;Name=WP_012570606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820868.2;locus_tag=NYQ15_RS09535;product=secretin N-terminal domain-containing protein;protein_id=WP_012570606.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1816467 1817021 . + . ID=gene-NYQ15_RS09540;Name=NYQ15_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09540 NZ_CP103431.1 Protein Homology CDS 1816467 1817021 . + 0 ID=cds-WP_005770313.1;Parent=gene-NYQ15_RS09540;Dbxref=GenBank:WP_005770313.1;Name=WP_005770313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770313.1;locus_tag=NYQ15_RS09540;product=shikimate kinase;protein_id=WP_005770313.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1817002 1818084 . + . ID=gene-NYQ15_RS09545;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=NYQ15_RS09545 NZ_CP103431.1 Protein Homology CDS 1817002 1818084 . + 0 ID=cds-WP_005770315.1;Parent=gene-NYQ15_RS09545;Dbxref=GenBank:WP_005770315.1;Name=WP_005770315.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820870.1;locus_tag=NYQ15_RS09545;product=3-dehydroquinate synthase;protein_id=WP_005770315.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1818592 1818858 . + . ID=gene-NYQ15_RS09550;Name=NYQ15_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09550 NZ_CP103431.1 Protein Homology CDS 1818592 1818858 . + 0 ID=cds-WP_005770317.1;Parent=gene-NYQ15_RS09550;Dbxref=GenBank:WP_005770317.1;Name=WP_005770317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820872.1;locus_tag=NYQ15_RS09550;product=hypothetical protein;protein_id=WP_005770317.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1818867 1820105 . - . ID=gene-NYQ15_RS09555;Name=NYQ15_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09555 NZ_CP103431.1 Protein Homology CDS 1818867 1820105 . - 0 ID=cds-WP_080592762.1;Parent=gene-NYQ15_RS09555;Dbxref=GenBank:WP_080592762.1;Name=WP_080592762.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820873.2;locus_tag=NYQ15_RS09555;product=MFS transporter;protein_id=WP_080592762.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1821727 1822308 . - . ID=gene-NYQ15_RS09565;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=NYQ15_RS09565 NZ_CP103431.1 Protein Homology CDS 1821727 1822308 . - 0 ID=cds-WP_005772800.1;Parent=gene-NYQ15_RS09565;Dbxref=GenBank:WP_005772800.1;Name=WP_005772800.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820876.1;locus_tag=NYQ15_RS09565;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_005772800.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1822814 1824145 . - . ID=gene-NYQ15_RS09570;Name=NYQ15_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09570 NZ_CP103431.1 Protein Homology CDS 1822814 1824145 . - 0 ID=cds-WP_005769950.1;Parent=gene-NYQ15_RS09570;Dbxref=GenBank:WP_005769950.1;Name=WP_005769950.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820878.1;locus_tag=NYQ15_RS09570;product=pitrilysin family protein;protein_id=WP_005769950.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1824145 1825524 . - . ID=gene-NYQ15_RS09575;Name=NYQ15_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09575 NZ_CP103431.1 Protein Homology CDS 1824145 1825524 . - 0 ID=cds-WP_012569538.1;Parent=gene-NYQ15_RS09575;Dbxref=GenBank:WP_012569538.1;Name=WP_012569538.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820879.1;locus_tag=NYQ15_RS09575;product=pitrilysin family protein;protein_id=WP_012569538.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1825713 1826687 . + . ID=gene-NYQ15_RS09580;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=NYQ15_RS09580 NZ_CP103431.1 Protein Homology CDS 1825713 1826687 . + 0 ID=cds-WP_005769954.1;Parent=gene-NYQ15_RS09580;Dbxref=GenBank:WP_005769954.1;Name=WP_005769954.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820880.1;locus_tag=NYQ15_RS09580;product=signal recognition particle-docking protein FtsY;protein_id=WP_005769954.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1826694 1827347 . + . ID=gene-NYQ15_RS09585;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=NYQ15_RS09585 NZ_CP103431.1 Protein Homology CDS 1826694 1827347 . + 0 ID=cds-WP_005769957.1;Parent=gene-NYQ15_RS09585;Dbxref=GenBank:WP_005769957.1;Name=WP_005769957.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820881.1;locus_tag=NYQ15_RS09585;product=cell division ATP-binding protein FtsE;protein_id=WP_005769957.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1827344 1828285 . + . ID=gene-NYQ15_RS09590;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=NYQ15_RS09590 NZ_CP103431.1 Protein Homology CDS 1827344 1828285 . + 0 ID=cds-WP_012570562.1;Parent=gene-NYQ15_RS09590;Dbxref=GenBank:WP_012570562.1;Name=WP_012570562.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820882.2;locus_tag=NYQ15_RS09590;product=permease-like cell division protein FtsX;protein_id=WP_012570562.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1828327 1828476 . + . ID=gene-NYQ15_RS09595;Name=NYQ15_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09595 NZ_CP103431.1 Protein Homology CDS 1828327 1828476 . + 0 ID=cds-WP_259430977.1;Parent=gene-NYQ15_RS09595;Dbxref=GenBank:WP_259430977.1;Name=WP_259430977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820883.1;locus_tag=NYQ15_RS09595;product=hypothetical protein;protein_id=WP_259430977.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1828630 1828788 . + . ID=gene-NYQ15_RS10620;Name=NYQ15_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10620 NZ_CP103431.1 Protein Homology CDS 1828630 1828788 . + 0 ID=cds-WP_349815958.1;Parent=gene-NYQ15_RS10620;Dbxref=GenBank:WP_349815958.1;Name=WP_349815958.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014691.5;locus_tag=NYQ15_RS10620;product=hypothetical protein;protein_id=WP_349815958.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1828765 1829481 . - . ID=gene-NYQ15_RS09600;Name=NYQ15_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09600 NZ_CP103431.1 Protein Homology CDS 1828765 1829481 . - 0 ID=cds-WP_005769964.1;Parent=gene-NYQ15_RS09600;Dbxref=GenBank:WP_005769964.1;Name=WP_005769964.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820884.1;locus_tag=NYQ15_RS09600;product=GNAT family N-acetyltransferase;protein_id=WP_005769964.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1829500 1829610 . - . ID=gene-NYQ15_RS09605;Name=NYQ15_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09605 NZ_CP103431.1 Protein Homology CDS 1829500 1829610 . - 0 ID=cds-WP_259411694.1;Parent=gene-NYQ15_RS09605;Dbxref=GenBank:WP_259411694.1;Name=WP_259411694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820885.1;locus_tag=NYQ15_RS09605;product=hypothetical protein;protein_id=WP_259411694.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1829647 1830513 . + . ID=gene-NYQ15_RS09610;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=NYQ15_RS09610 NZ_CP103431.1 Protein Homology CDS 1829647 1830513 . + 0 ID=cds-WP_005772804.1;Parent=gene-NYQ15_RS09610;Dbxref=GenBank:WP_005772804.1;Name=WP_005772804.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820886.1;locus_tag=NYQ15_RS09610;product=RNA polymerase sigma factor RpoH;protein_id=WP_005772804.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1830539 1831297 . + . ID=gene-NYQ15_RS09615;Name=NYQ15_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09615 NZ_CP103431.1 Protein Homology CDS 1830539 1831297 . + 0 ID=cds-WP_005769970.1;Parent=gene-NYQ15_RS09615;Dbxref=GenBank:WP_005769970.1;Name=WP_005769970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820887.1;locus_tag=NYQ15_RS09615;product=DsbA family protein;protein_id=WP_005769970.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1831930 1832889 . + . ID=gene-NYQ15_RS09625;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=NYQ15_RS09625 NZ_CP103431.1 Protein Homology CDS 1831930 1832889 . + 0 ID=cds-WP_005772809.1;Parent=gene-NYQ15_RS09625;Dbxref=GenBank:WP_005772809.1;Name=WP_005772809.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820890.1;locus_tag=NYQ15_RS09625;product=glycine--tRNA ligase subunit alpha;protein_id=WP_005772809.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1832892 1834961 . + . ID=gene-NYQ15_RS09630;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=NYQ15_RS09630 NZ_CP103431.1 Protein Homology CDS 1832892 1834961 . + 0 ID=cds-WP_005769978.1;Parent=gene-NYQ15_RS09630;Dbxref=GenBank:WP_005769978.1;Name=WP_005769978.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_040948212.1;locus_tag=NYQ15_RS09630;product=glycine--tRNA ligase subunit beta;protein_id=WP_005769978.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1834958 1836250 . + . ID=gene-NYQ15_RS09635;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=NYQ15_RS09635 NZ_CP103431.1 Protein Homology CDS 1834958 1836250 . + 0 ID=cds-WP_005772810.1;Parent=gene-NYQ15_RS09635;Dbxref=GenBank:WP_005772810.1;Name=WP_005772810.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820892.1;locus_tag=NYQ15_RS09635;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_005772810.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1836237 1836677 . - . ID=gene-NYQ15_RS09640;Name=NYQ15_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09640 NZ_CP103431.1 Protein Homology CDS 1836237 1836677 . - 0 ID=cds-WP_005769983.1;Parent=gene-NYQ15_RS09640;Dbxref=GenBank:WP_005769983.1;Name=WP_005769983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820893.1;locus_tag=NYQ15_RS09640;product=universal stress protein;protein_id=WP_005769983.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1837201 1837335 . + . ID=gene-NYQ15_RS09645;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=NYQ15_RS09645 NZ_CP103431.1 Protein Homology CDS 1837201 1837335 . + 0 ID=cds-WP_005769984.1;Parent=gene-NYQ15_RS09645;Dbxref=GenBank:WP_005769984.1;Name=WP_005769984.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000831329.1;locus_tag=NYQ15_RS09645;product=50S ribosomal protein L34;protein_id=WP_005769984.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1837332 1837700 . + . ID=gene-NYQ15_RS09650;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=NYQ15_RS09650 NZ_CP103431.1 Protein Homology CDS 1837332 1837700 . + 0 ID=cds-WP_012570564.1;Parent=gene-NYQ15_RS09650;Dbxref=GenBank:WP_012570564.1;Name=WP_012570564.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820895.2;locus_tag=NYQ15_RS09650;product=ribonuclease P protein component;protein_id=WP_012570564.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1837640 1837906 . + . ID=gene-NYQ15_RS09655;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=NYQ15_RS09655 NZ_CP103431.1 Protein Homology CDS 1837640 1837906 . + 0 ID=cds-WP_259411696.1;Parent=gene-NYQ15_RS09655;Dbxref=GenBank:WP_259411696.1;Name=WP_259411696.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820896.3;locus_tag=NYQ15_RS09655;product=membrane protein insertion efficiency factor YidD;protein_id=WP_259411696.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1837910 1839610 . + . ID=gene-NYQ15_RS09660;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=NYQ15_RS09660 NZ_CP103431.1 Protein Homology CDS 1837910 1839610 . + 0 ID=cds-WP_005769990.1;Parent=gene-NYQ15_RS09660;Dbxref=GenBank:WP_005769990.1;Name=WP_005769990.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820897.1;locus_tag=NYQ15_RS09660;product=membrane protein insertase YidC;protein_id=WP_005769990.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1839755 1839856 . + . ID=gene-NYQ15_RS09665;Name=NYQ15_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09665 NZ_CP103431.1 Protein Homology CDS 1839755 1839856 . + 0 ID=cds-WP_010958539.1;Parent=gene-NYQ15_RS09665;Dbxref=GenBank:WP_010958539.1;Name=WP_010958539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820898.1;locus_tag=NYQ15_RS09665;product=hypothetical protein;protein_id=WP_010958539.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1840041 1841462 . + . ID=gene-NYQ15_RS09670;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=NYQ15_RS09670 NZ_CP103431.1 Protein Homology CDS 1840041 1841462 . + 0 ID=cds-WP_012570565.1;Parent=gene-NYQ15_RS09670;Dbxref=GenBank:WP_012570565.1;Name=WP_012570565.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820899.1;locus_tag=NYQ15_RS09670;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_012570565.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1841775 1843658 . + . ID=gene-NYQ15_RS09675;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=NYQ15_RS09675 NZ_CP103431.1 Protein Homology CDS 1841775 1843658 . + 0 ID=cds-WP_005769999.1;Parent=gene-NYQ15_RS09675;Dbxref=GenBank:WP_005769999.1;Name=WP_005769999.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820901.2;locus_tag=NYQ15_RS09675;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_005769999.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1843690 1844304 . + . ID=gene-NYQ15_RS09680;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=NYQ15_RS09680 NZ_CP103431.1 Protein Homology CDS 1843690 1844304 . + 0 ID=cds-WP_005772434.1;Parent=gene-NYQ15_RS09680;Dbxref=GenBank:WP_005772434.1;Name=WP_005772434.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820902.1;locus_tag=NYQ15_RS09680;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_005772434.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1844311 1845081 . + . ID=gene-NYQ15_RS09685;Name=NYQ15_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09685 NZ_CP103431.1 Protein Homology CDS 1844311 1845081 . + 0 ID=cds-WP_005770002.1;Parent=gene-NYQ15_RS09685;Dbxref=GenBank:WP_005770002.1;Name=WP_005770002.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820903.1;locus_tag=NYQ15_RS09685;product=ParA family protein;protein_id=WP_005770002.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1845072 1845944 . + . ID=gene-NYQ15_RS09690;Name=NYQ15_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09690 NZ_CP103431.1 Protein Homology CDS 1845072 1845944 . + 0 ID=cds-WP_012570567.1;Parent=gene-NYQ15_RS09690;Dbxref=GenBank:WP_012570567.1;Name=WP_012570567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820904.2;locus_tag=NYQ15_RS09690;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_012570567.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1845954 1848764 . + . ID=gene-NYQ15_RS09695;Name=NYQ15_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09695 NZ_CP103431.1 Protein Homology CDS 1845954 1848764 . + 0 ID=cds-WP_259430978.1;Parent=gene-NYQ15_RS09695;Dbxref=GenBank:WP_259430978.1;Name=WP_259430978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820905.2;locus_tag=NYQ15_RS09695;product=AMP-binding protein;protein_id=WP_259430978.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1848751 1850145 . + . ID=gene-NYQ15_RS09700;Name=NYQ15_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09700 NZ_CP103431.1 Protein Homology CDS 1848751 1850145 . + 0 ID=cds-WP_259430979.1;Parent=gene-NYQ15_RS09700;Dbxref=GenBank:WP_259430979.1;Name=WP_259430979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820906.2;locus_tag=NYQ15_RS09700;product=MFS transporter;protein_id=WP_259430979.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1850188 1850364 . + . ID=gene-NYQ15_RS09705;Name=NYQ15_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09705 NZ_CP103431.1 Protein Homology CDS 1850188 1850364 . + 0 ID=cds-WP_005770008.1;Parent=gene-NYQ15_RS09705;Dbxref=GenBank:WP_005770008.1;Name=WP_005770008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770008.1;locus_tag=NYQ15_RS09705;product=DUF1328 domain-containing protein;protein_id=WP_005770008.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1850460 1850750 . + . ID=gene-NYQ15_RS09710;Name=NYQ15_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09710 NZ_CP103431.1 Protein Homology CDS 1850460 1850750 . + 0 ID=cds-WP_010958547.1;Parent=gene-NYQ15_RS09710;Dbxref=GenBank:WP_010958547.1;Name=WP_010958547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002333040.1;locus_tag=NYQ15_RS09710;product=hypothetical protein;protein_id=WP_010958547.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1850770 1850901 . + . ID=gene-NYQ15_RS09715;Name=NYQ15_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09715 NZ_CP103431.1 Protein Homology CDS 1850770 1850901 . + 0 ID=cds-WP_005770012.1;Parent=gene-NYQ15_RS09715;Dbxref=GenBank:WP_005770012.1;Name=WP_005770012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820908.1;locus_tag=NYQ15_RS09715;product=hypothetical protein;protein_id=WP_005770012.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1850903 1851103 . - . ID=gene-NYQ15_RS09720;Name=NYQ15_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09720 NZ_CP103431.1 Protein Homology CDS 1850903 1851103 . - 0 ID=cds-WP_259430980.1;Parent=gene-NYQ15_RS09720;Dbxref=GenBank:WP_259430980.1;Name=WP_259430980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820909.2;locus_tag=NYQ15_RS09720;product=DUF6496 domain-containing protein;protein_id=WP_259430980.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1851205 1852029 . + . ID=gene-NYQ15_RS09725;Name=NYQ15_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09725 NZ_CP103431.1 Protein Homology CDS 1851205 1852029 . + 0 ID=cds-WP_005770018.1;Parent=gene-NYQ15_RS09725;Dbxref=GenBank:WP_005770018.1;Name=WP_005770018.1;Ontology_term=GO:0006303,GO:0045027;gbkey=CDS;go_function=DNA end binding|0045027||IEA;go_process=double-strand break repair via nonhomologous end joining|0006303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770018.1;locus_tag=NYQ15_RS09725;product=Ku protein;protein_id=WP_005770018.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1852026 1854473 . + . ID=gene-NYQ15_RS09730;Name=ligD;gbkey=Gene;gene=ligD;gene_biotype=protein_coding;locus_tag=NYQ15_RS09730 NZ_CP103431.1 Protein Homology CDS 1852026 1854473 . + 0 ID=cds-WP_005770020.1;Parent=gene-NYQ15_RS09730;Dbxref=GenBank:WP_005770020.1;Name=WP_005770020.1;Ontology_term=GO:0006303;gbkey=CDS;gene=ligD;go_process=double-strand break repair via nonhomologous end joining|0006303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820911.2;locus_tag=NYQ15_RS09730;product=DNA ligase D;protein_id=WP_005770020.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1854827 1855327 . - . ID=gene-NYQ15_RS09735;Name=NYQ15_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09735 NZ_CP103431.1 Protein Homology CDS 1854827 1855327 . - 0 ID=cds-WP_259411698.1;Parent=gene-NYQ15_RS09735;Dbxref=GenBank:WP_259411698.1;Name=WP_259411698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017252870.1;locus_tag=NYQ15_RS09735;product=hypothetical protein;protein_id=WP_259411698.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1855349 1856146 . - . ID=gene-NYQ15_RS09740;Name=NYQ15_RS09740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS09740;pseudo=true NZ_CP103431.1 Protein Homology CDS 1855349 1856146 . - 0 ID=cds-NYQ15_RS09740;Parent=gene-NYQ15_RS09740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820913.1;locus_tag=NYQ15_RS09740;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1856423 1857601 . - . ID=gene-NYQ15_RS09745;Name=NYQ15_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09745 NZ_CP103431.1 Protein Homology CDS 1856423 1857601 . - 0 ID=cds-WP_039669140.1;Parent=gene-NYQ15_RS09745;Dbxref=GenBank:WP_039669140.1;Name=WP_039669140.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770025.1;locus_tag=NYQ15_RS09745;product=ATP-binding protein;protein_id=WP_039669140.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1857690 1858175 . + . ID=gene-NYQ15_RS09750;Name=NYQ15_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09750 NZ_CP103431.1 Protein Homology CDS 1857690 1858175 . + 0 ID=cds-WP_012570571.1;Parent=gene-NYQ15_RS09750;Dbxref=GenBank:WP_012570571.1;Name=WP_012570571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820914.2;locus_tag=NYQ15_RS09750;product=ATP synthase subunit I;protein_id=WP_012570571.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1858176 1858970 . + . ID=gene-NYQ15_RS09755;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=NYQ15_RS09755 NZ_CP103431.1 Protein Homology CDS 1858176 1858970 . + 0 ID=cds-WP_259430981.1;Parent=gene-NYQ15_RS09755;Dbxref=GenBank:WP_259430981.1;Name=WP_259430981.1;Ontology_term=GO:0015986,GO:0015078,GO:0045263;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820915.1;locus_tag=NYQ15_RS09755;product=F0F1 ATP synthase subunit A;protein_id=WP_259430981.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1858988 1859290 . + . ID=gene-NYQ15_RS09760;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=NYQ15_RS09760 NZ_CP103431.1 Protein Homology CDS 1858988 1859290 . + 0 ID=cds-WP_005770030.1;Parent=gene-NYQ15_RS09760;Dbxref=GenBank:WP_005770030.1;Name=WP_005770030.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820916.1;locus_tag=NYQ15_RS09760;product=F0F1 ATP synthase subunit C;protein_id=WP_005770030.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1859419 1859889 . + . ID=gene-NYQ15_RS09765;Name=NYQ15_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09765 NZ_CP103431.1 Protein Homology CDS 1859419 1859889 . + 0 ID=cds-WP_005770032.1;Parent=gene-NYQ15_RS09765;Dbxref=GenBank:WP_005770032.1;Name=WP_005770032.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820917.1;locus_tag=NYQ15_RS09765;product=F0F1 ATP synthase subunit B;protein_id=WP_005770032.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1859889 1860446 . + . ID=gene-NYQ15_RS09770;Name=NYQ15_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09770 NZ_CP103431.1 Protein Homology CDS 1859889 1860446 . + 0 ID=cds-WP_259430982.1;Parent=gene-NYQ15_RS09770;Dbxref=GenBank:WP_259430982.1;Name=WP_259430982.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820918.1;locus_tag=NYQ15_RS09770;product=F0F1 ATP synthase subunit delta;protein_id=WP_259430982.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1860454 1862001 . + . ID=gene-NYQ15_RS09775;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=NYQ15_RS09775 NZ_CP103431.1 Protein Homology CDS 1860454 1862001 . + 0 ID=cds-WP_005770035.1;Parent=gene-NYQ15_RS09775;Dbxref=GenBank:WP_005770035.1;Name=WP_005770035.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820919.1;locus_tag=NYQ15_RS09775;product=F0F1 ATP synthase subunit alpha;protein_id=WP_005770035.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1862100 1862969 . + . ID=gene-NYQ15_RS09780;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=NYQ15_RS09780 NZ_CP103431.1 Protein Homology CDS 1862100 1862969 . + 0 ID=cds-WP_005770036.1;Parent=gene-NYQ15_RS09780;Dbxref=GenBank:WP_005770036.1;Name=WP_005770036.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820920.1;locus_tag=NYQ15_RS09780;product=F0F1 ATP synthase subunit gamma;protein_id=WP_005770036.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1863005 1864456 . + . ID=gene-NYQ15_RS09785;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=NYQ15_RS09785 NZ_CP103431.1 Protein Homology CDS 1863005 1864456 . + 0 ID=cds-WP_010958557.1;Parent=gene-NYQ15_RS09785;Dbxref=GenBank:WP_010958557.1;Name=WP_010958557.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820921.2;locus_tag=NYQ15_RS09785;product=F0F1 ATP synthase subunit beta;protein_id=WP_010958557.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1864580 1865008 . + . ID=gene-NYQ15_RS09790;Name=NYQ15_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09790 NZ_CP103431.1 Protein Homology CDS 1864580 1865008 . + 0 ID=cds-WP_005770045.1;Parent=gene-NYQ15_RS09790;Dbxref=GenBank:WP_005770045.1;Name=WP_005770045.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820922.1;locus_tag=NYQ15_RS09790;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_005770045.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1865027 1866394 . + . ID=gene-NYQ15_RS09795;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=NYQ15_RS09795 NZ_CP103431.1 Protein Homology CDS 1865027 1866394 . + 0 ID=cds-WP_005770048.1;Parent=gene-NYQ15_RS09795;Dbxref=GenBank:WP_005770048.1;Name=WP_005770048.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134,GO:0005737;gbkey=CDS;gene=glmU;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820923.1;locus_tag=NYQ15_RS09795;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_005770048.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1867171 1868319 . + . ID=gene-NYQ15_RS09805;Name=NYQ15_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09805 NZ_CP103431.1 Protein Homology CDS 1867171 1868319 . + 0 ID=cds-WP_005770051.1;Parent=gene-NYQ15_RS09805;Dbxref=GenBank:WP_005770051.1;Name=WP_005770051.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770051.1;locus_tag=NYQ15_RS09805;product=ATP-binding protein;protein_id=WP_005770051.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1868416 1868862 . - . ID=gene-NYQ15_RS09810;Name=NYQ15_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09810 NZ_CP103431.1 Protein Homology CDS 1868416 1868862 . - 0 ID=cds-WP_005772444.1;Parent=gene-NYQ15_RS09810;Dbxref=GenBank:WP_005772444.1;Name=WP_005772444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820925.1;locus_tag=NYQ15_RS09810;product=hypothetical protein;protein_id=WP_005772444.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1868924 1869040 . + . ID=gene-NYQ15_RS09815;Name=NYQ15_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09815 NZ_CP103431.1 Protein Homology CDS 1868924 1869040 . + 0 ID=cds-WP_005770055.1;Parent=gene-NYQ15_RS09815;Dbxref=GenBank:WP_005770055.1;Name=WP_005770055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820926.1;locus_tag=NYQ15_RS09815;product=hypothetical protein;protein_id=WP_005770055.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1869106 1870704 . + . ID=gene-NYQ15_RS09820;Name=NYQ15_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09820 NZ_CP103431.1 Protein Homology CDS 1869106 1870704 . + 0 ID=cds-WP_005770057.1;Parent=gene-NYQ15_RS09820;Dbxref=GenBank:WP_005770057.1;Name=WP_005770057.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820927.1;locus_tag=NYQ15_RS09820;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_005770057.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1870662 1871234 . - . ID=gene-NYQ15_RS09825;Name=NYQ15_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09825 NZ_CP103431.1 Protein Homology CDS 1870662 1871234 . - 0 ID=cds-WP_005770059.1;Parent=gene-NYQ15_RS09825;Dbxref=GenBank:WP_005770059.1;Name=WP_005770059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820928.1;locus_tag=NYQ15_RS09825;product=hypothetical protein;protein_id=WP_005770059.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1871472 1872344 . - . ID=gene-NYQ15_RS09830;Name=NYQ15_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09830 NZ_CP103431.1 Protein Homology CDS 1871472 1872344 . - 0 ID=cds-WP_005772436.1;Parent=gene-NYQ15_RS09830;Dbxref=GenBank:WP_005772436.1;Name=WP_005772436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820929.1;locus_tag=NYQ15_RS09830;product=phosphosulfolactate synthase;protein_id=WP_005772436.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1872333 1873592 . + . ID=gene-NYQ15_RS09835;Name=NYQ15_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09835 NZ_CP103431.1 Protein Homology CDS 1872333 1873592 . + 0 ID=cds-WP_050497409.1;Parent=gene-NYQ15_RS09835;Dbxref=GenBank:WP_050497409.1;Name=WP_050497409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820930.2;locus_tag=NYQ15_RS09835;product=NAD(P) transhydrogenase subunit alpha;protein_id=WP_050497409.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1873975 1874274 . + . ID=gene-NYQ15_RS09845;Name=NYQ15_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09845 NZ_CP103431.1 Protein Homology CDS 1873975 1874274 . + 0 ID=cds-WP_005770065.1;Parent=gene-NYQ15_RS09845;Dbxref=GenBank:WP_005770065.1;Name=WP_005770065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820931.1;locus_tag=NYQ15_RS09845;product=NAD(P) transhydrogenase subunit alpha;protein_id=WP_005770065.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1874271 1875641 . + . ID=gene-NYQ15_RS09850;Name=NYQ15_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09850 NZ_CP103431.1 Protein Homology CDS 1874271 1875641 . + 0 ID=cds-WP_098953128.1;Parent=gene-NYQ15_RS09850;Dbxref=GenBank:WP_098953128.1;Name=WP_098953128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820932.1;locus_tag=NYQ15_RS09850;product=NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta;protein_id=WP_098953128.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1875733 1875963 . + . ID=gene-NYQ15_RS10625;Name=NYQ15_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10625 NZ_CP103431.1 Protein Homology CDS 1875733 1875963 . + 0 ID=cds-WP_080515057.1;Parent=gene-NYQ15_RS10625;Dbxref=GenBank:WP_080515057.1;Name=WP_080515057.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024571.5;locus_tag=NYQ15_RS10625;product=AAA family ATPase;protein_id=WP_080515057.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1875935 1876315 . + . ID=gene-NYQ15_RS09855;Name=NYQ15_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09855 NZ_CP103431.1 Protein Homology CDS 1875935 1876315 . + 0 ID=cds-WP_017253490.1;Parent=gene-NYQ15_RS09855;Dbxref=GenBank:WP_017253490.1;Name=WP_017253490.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025019.5;locus_tag=NYQ15_RS09855;product=DUF4143 domain-containing protein;protein_id=WP_017253490.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1876301 1877092 . - . ID=gene-NYQ15_RS09860;Name=NYQ15_RS09860;end_range=1877092,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09860;partial=true NZ_CP103431.1 Protein Homology CDS 1876301 1877092 . - 0 ID=cds-WP_310795114.1;Parent=gene-NYQ15_RS09860;Dbxref=GenBank:WP_310795114.1;Name=WP_310795114.1;Ontology_term=GO:0006364,GO:0008168;end_range=1877092,.;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: protein motif:HMM:TIGR00046.1;locus_tag=NYQ15_RS09860;partial=true;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_310795114.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1878588 1880699 . + . ID=gene-NYQ15_RS09865;Name=NYQ15_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09865 NZ_CP103431.1 Protein Homology CDS 1878588 1880699 . + 0 ID=cds-WP_005772913.1;Parent=gene-NYQ15_RS09865;Dbxref=GenBank:WP_005772913.1;Name=WP_005772913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772913.1;locus_tag=NYQ15_RS09865;product=CbuK_2014 family Dot/Icm T4SS effector;protein_id=WP_005772913.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1880670 1881503 . - . ID=gene-NYQ15_RS09870;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=NYQ15_RS09870 NZ_CP103431.1 Protein Homology CDS 1880670 1881503 . - 0 ID=cds-WP_005772914.1;Parent=gene-NYQ15_RS09870;Dbxref=GenBank:WP_005772914.1;Name=WP_005772914.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820939.1;locus_tag=NYQ15_RS09870;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_005772914.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1881506 1882591 . - . ID=gene-NYQ15_RS09875;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=NYQ15_RS09875 NZ_CP103431.1 Protein Homology CDS 1881506 1882591 . - 0 ID=cds-WP_005772919.1;Parent=gene-NYQ15_RS09875;Dbxref=GenBank:WP_005772919.1;Name=WP_005772919.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820940.1;locus_tag=NYQ15_RS09875;product=peptide chain release factor 1;protein_id=WP_005772919.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1882588 1883829 . - . ID=gene-NYQ15_RS09880;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=NYQ15_RS09880 NZ_CP103431.1 Protein Homology CDS 1882588 1883829 . - 0 ID=cds-WP_005769672.1;Parent=gene-NYQ15_RS09880;Dbxref=GenBank:WP_005769672.1;Name=WP_005769672.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820941.1;locus_tag=NYQ15_RS09880;product=glutamyl-tRNA reductase;protein_id=WP_005769672.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1883960 1884772 . + . ID=gene-NYQ15_RS09885;Name=NYQ15_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09885 NZ_CP103431.1 Protein Homology CDS 1883960 1884772 . + 0 ID=cds-WP_230454451.1;Parent=gene-NYQ15_RS09885;Dbxref=GenBank:WP_230454451.1;Name=WP_230454451.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.5;locus_tag=NYQ15_RS09885;product=MFS transporter;protein_id=WP_230454451.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1884756 1885136 . + . ID=gene-NYQ15_RS09890;Name=NYQ15_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09890 NZ_CP103431.1 GeneMarkS-2+ CDS 1884756 1885136 . + 0 ID=cds-WP_080775235.1;Parent=gene-NYQ15_RS09890;Dbxref=GenBank:WP_080775235.1;Name=WP_080775235.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS09890;product=hypothetical protein;protein_id=WP_080775235.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1885114 1885467 . - . ID=gene-NYQ15_RS09895;Name=NYQ15_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09895 NZ_CP103431.1 Protein Homology CDS 1885114 1885467 . - 0 ID=cds-WP_005769675.1;Parent=gene-NYQ15_RS09895;Dbxref=GenBank:WP_005769675.1;Name=WP_005769675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820943.3;locus_tag=NYQ15_RS09895;product=dihydroneopterin aldolase;protein_id=WP_005769675.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1885460 1885903 . - . ID=gene-NYQ15_RS09900;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=NYQ15_RS09900 NZ_CP103431.1 Protein Homology CDS 1885460 1885903 . - 0 ID=cds-WP_005769678.1;Parent=gene-NYQ15_RS09900;Dbxref=GenBank:WP_005769678.1;Name=WP_005769678.1;Ontology_term=GO:0006355,GO:0008270,GO:0019899;gbkey=CDS;gene=dksA;go_function=zinc ion binding|0008270||IEA,enzyme binding|0019899||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820944.1;locus_tag=NYQ15_RS09900;product=RNA polymerase-binding protein DksA;protein_id=WP_005769678.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1886045 1886875 . - . ID=gene-NYQ15_RS09905;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=NYQ15_RS09905 NZ_CP103431.1 Protein Homology CDS 1886045 1886875 . - 0 ID=cds-WP_040070979.1;Parent=gene-NYQ15_RS09905;Dbxref=GenBank:WP_040070979.1;Name=WP_040070979.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820945.1;locus_tag=NYQ15_RS09905;product=diaminopimelate epimerase;protein_id=WP_040070979.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1886865 1886987 . - . ID=gene-NYQ15_RS09910;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=NYQ15_RS09910 NZ_CP103431.1 Protein Homology CDS 1886865 1886987 . - 0 ID=cds-WP_005769682.1;Parent=gene-NYQ15_RS09910;Dbxref=GenBank:WP_005769682.1;Name=WP_005769682.1;gbkey=CDS;gene=lptM;inference=COORDINATES: protein motif:HMM:NF025012.5;locus_tag=NYQ15_RS09910;product=LPS translocon maturation chaperone LptM;protein_id=WP_005769682.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1887224 1887445 . - . ID=gene-NYQ15_RS09915;Name=NYQ15_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09915 NZ_CP103431.1 Protein Homology CDS 1887224 1887445 . - 0 ID=cds-WP_005769684.1;Parent=gene-NYQ15_RS09915;Dbxref=GenBank:WP_005769684.1;Name=WP_005769684.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820947.1;locus_tag=NYQ15_RS09915;product=response regulator transcription factor;protein_id=WP_005769684.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1887460 1887615 . - . ID=gene-NYQ15_RS09920;Name=NYQ15_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09920 NZ_CP103431.1 Protein Homology CDS 1887460 1887615 . - 0 ID=cds-WP_010958573.1;Parent=gene-NYQ15_RS09920;Dbxref=GenBank:WP_010958573.1;Name=WP_010958573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820948.1;locus_tag=NYQ15_RS09920;product=hypothetical protein;protein_id=WP_010958573.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1887625 1887720 . + . ID=gene-NYQ15_RS09925;Name=NYQ15_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09925 NZ_CP103431.1 Protein Homology CDS 1887625 1887720 . + 0 ID=cds-WP_010958574.1;Parent=gene-NYQ15_RS09925;Dbxref=GenBank:WP_010958574.1;Name=WP_010958574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820949.1;locus_tag=NYQ15_RS09925;product=hypothetical protein;protein_id=WP_010958574.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1887717 1888427 . + . ID=gene-NYQ15_RS09930;Name=NYQ15_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09930 NZ_CP103431.1 Protein Homology CDS 1887717 1888427 . + 0 ID=cds-WP_012570934.1;Parent=gene-NYQ15_RS09930;Dbxref=GenBank:WP_012570934.1;Name=WP_012570934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820950.2;locus_tag=NYQ15_RS09930;product=alpha/beta hydrolase;protein_id=WP_012570934.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1888407 1889066 . - . ID=gene-NYQ15_RS09935;Name=murU;gbkey=Gene;gene=murU;gene_biotype=protein_coding;locus_tag=NYQ15_RS09935 NZ_CP103431.1 Protein Homology CDS 1888407 1889066 . - 0 ID=cds-WP_005769691.1;Parent=gene-NYQ15_RS09935;Dbxref=GenBank:WP_005769691.1;Name=WP_005769691.1;Ontology_term=GO:0009252,GO:0016779;gbkey=CDS;gene=murU;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820951.1;locus_tag=NYQ15_RS09935;product=N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU;protein_id=WP_005769691.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1889072 1890169 . - . ID=gene-NYQ15_RS09940;Name=NYQ15_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09940 NZ_CP103431.1 Protein Homology CDS 1889072 1890169 . - 0 ID=cds-WP_011997404.1;Parent=gene-NYQ15_RS09940;Dbxref=GenBank:WP_011997404.1;Name=WP_011997404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820952.2;locus_tag=NYQ15_RS09940;product=aminoglycoside phosphotransferase family protein;protein_id=WP_011997404.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1890151 1892763 . + . ID=gene-NYQ15_RS09945;Name=NYQ15_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09945 NZ_CP103431.1 Protein Homology CDS 1890151 1892763 . + 0 ID=cds-WP_005772437.1;Parent=gene-NYQ15_RS09945;Dbxref=GenBank:WP_005772437.1;Name=WP_005772437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820953.1;locus_tag=NYQ15_RS09945;product=LPS-assembly protein LptD;protein_id=WP_005772437.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1892769 1893734 . + . ID=gene-NYQ15_RS09950;Name=NYQ15_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09950 NZ_CP103431.1 Protein Homology CDS 1892769 1893734 . + 0 ID=cds-WP_005769698.1;Parent=gene-NYQ15_RS09950;Dbxref=GenBank:WP_005769698.1;Name=WP_005769698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820955.2;locus_tag=NYQ15_RS09950;product=SurA N-terminal domain-containing protein;protein_id=WP_005769698.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1893734 1894657 . + . ID=gene-NYQ15_RS09955;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=NYQ15_RS09955 NZ_CP103431.1 Protein Homology CDS 1893734 1894657 . + 0 ID=cds-WP_005769700.1;Parent=gene-NYQ15_RS09955;Dbxref=GenBank:WP_005769700.1;Name=WP_005769700.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820956.1;locus_tag=NYQ15_RS09955;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_005769700.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1894809 1895585 . + . ID=gene-NYQ15_RS09960;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=NYQ15_RS09960 NZ_CP103431.1 Protein Homology CDS 1894809 1895585 . + 0 ID=cds-WP_005772431.1;Parent=gene-NYQ15_RS09960;Dbxref=GenBank:WP_005772431.1;Name=WP_005772431.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820957.2;locus_tag=NYQ15_RS09960;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_005772431.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1895592 1895675 . + . ID=gene-NYQ15_RS09965;Name=NYQ15_RS09965;end_range=1895675,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS09965;partial=true;pseudo=true NZ_CP103431.1 Protein Homology CDS 1895592 1895675 . + 0 ID=cds-NYQ15_RS09965;Parent=gene-NYQ15_RS09965;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1895675,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819535.1;locus_tag=NYQ15_RS09965;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1895698 1896132 . + . ID=gene-NYQ15_RS09970;Name=NYQ15_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09970 NZ_CP103431.1 Protein Homology CDS 1895698 1896132 . + 0 ID=cds-WP_005769705.1;Parent=gene-NYQ15_RS09970;Dbxref=GenBank:WP_005769705.1;Name=WP_005769705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820958.1;locus_tag=NYQ15_RS09970;product=universal stress protein;protein_id=WP_005769705.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1896301 1896675 . + . ID=gene-NYQ15_RS09975;Name=NYQ15_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09975 NZ_CP103431.1 Protein Homology CDS 1896301 1896675 . + 0 ID=cds-WP_005769706.1;Parent=gene-NYQ15_RS09975;Dbxref=GenBank:WP_005769706.1;Name=WP_005769706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820959.1;locus_tag=NYQ15_RS09975;product=hypothetical protein;protein_id=WP_005769706.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1896720 1897418 . + . ID=gene-NYQ15_RS09980;Name=NYQ15_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09980 NZ_CP103431.1 Protein Homology CDS 1896720 1897418 . + 0 ID=cds-WP_010958581.1;Parent=gene-NYQ15_RS09980;Dbxref=GenBank:WP_010958581.1;Name=WP_010958581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820960.1;locus_tag=NYQ15_RS09980;product=outer membrane beta-barrel protein;protein_id=WP_010958581.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1897482 1898423 . + . ID=gene-NYQ15_RS09985;Name=NYQ15_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09985 NZ_CP103431.1 Protein Homology CDS 1897482 1898423 . + 0 ID=cds-WP_005769709.1;Parent=gene-NYQ15_RS09985;Dbxref=GenBank:WP_005769709.1;Name=WP_005769709.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820961.1;locus_tag=NYQ15_RS09985;product=S49 family peptidase;protein_id=WP_005769709.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1898436 1899311 . + . ID=gene-NYQ15_RS09990;Name=NYQ15_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS09990 NZ_CP103431.1 Protein Homology CDS 1898436 1899311 . + 0 ID=cds-WP_005772440.1;Parent=gene-NYQ15_RS09990;Dbxref=GenBank:WP_005772440.1;Name=WP_005772440.1;Ontology_term=GO:0008803;gbkey=CDS;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820962.1;locus_tag=NYQ15_RS09990;product=symmetrical bis(5'-nucleosyl)-tetraphosphatase;protein_id=WP_005772440.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1899314 1899451 . + . ID=gene-NYQ15_RS10630;Name=NYQ15_RS10630;end_range=1899451,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS10630;partial=true;pseudo=true;start_range=.,1899314 NZ_CP103431.1 Protein Homology CDS 1899314 1899451 . + 0 ID=cds-NYQ15_RS10630;Parent=gene-NYQ15_RS10630;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0008219;end_range=1899451,.;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820967.1;locus_tag=NYQ15_RS10630;partial=true;product=Txe/YoeB family addiction module toxin;pseudo=true;start_range=.,1899314;transl_table=11 NZ_CP103431.1 RefSeq gene 1899460 1899594 . + . ID=gene-NYQ15_RS10000;Name=NYQ15_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10000 NZ_CP103431.1 Protein Homology CDS 1899460 1899594 . + 0 ID=cds-WP_010958583.1;Parent=gene-NYQ15_RS10000;Dbxref=GenBank:WP_010958583.1;Name=WP_010958583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002333045.1;locus_tag=NYQ15_RS10000;product=hypothetical protein;protein_id=WP_010958583.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1901233 1901487 . + . ID=gene-NYQ15_RS10005;Name=NYQ15_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10005 NZ_CP103431.1 Protein Homology CDS 1901233 1901487 . + 0 ID=cds-WP_005769716.1;Parent=gene-NYQ15_RS10005;Dbxref=GenBank:WP_005769716.1;Name=WP_005769716.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820966.1;locus_tag=NYQ15_RS10005;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_005769716.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1901487 1901762 . + . ID=gene-NYQ15_RS10010;Name=NYQ15_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10010 NZ_CP103431.1 Protein Homology CDS 1901487 1901762 . + 0 ID=cds-WP_005769718.1;Parent=gene-NYQ15_RS10010;Dbxref=GenBank:WP_005769718.1;Name=WP_005769718.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820967.1;locus_tag=NYQ15_RS10010;product=Txe/YoeB family addiction module toxin;protein_id=WP_005769718.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1901735 1902220 . - . ID=gene-NYQ15_RS10015;Name=NYQ15_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10015 NZ_CP103431.1 Protein Homology CDS 1901735 1902220 . - 0 ID=cds-WP_005769725.1;Parent=gene-NYQ15_RS10015;Dbxref=GenBank:WP_005769725.1;Name=WP_005769725.1;Ontology_term=GO:0004146,GO:0050661;gbkey=CDS;go_function=dihydrofolate reductase activity|0004146||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820968.1;locus_tag=NYQ15_RS10015;product=dihydrofolate reductase;protein_id=WP_005769725.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1902217 1903020 . - . ID=gene-NYQ15_RS10020;Name=NYQ15_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10020 NZ_CP103431.1 Protein Homology CDS 1902217 1903020 . - 0 ID=cds-WP_010958584.1;Parent=gene-NYQ15_RS10020;Dbxref=GenBank:WP_010958584.1;Name=WP_010958584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820969.2;locus_tag=NYQ15_RS10020;product=epoxyqueuosine reductase QueH;protein_id=WP_010958584.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1903216 1903503 . + . ID=gene-NYQ15_RS10025;Name=NYQ15_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10025 NZ_CP103431.1 Protein Homology CDS 1903216 1903503 . + 0 ID=cds-WP_005769730.1;Parent=gene-NYQ15_RS10025;Dbxref=GenBank:WP_005769730.1;Name=WP_005769730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820970.2;locus_tag=NYQ15_RS10025;product=acylphosphatase;protein_id=WP_005769730.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1903479 1904033 . - . ID=gene-NYQ15_RS10030;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=NYQ15_RS10030 NZ_CP103431.1 Protein Homology CDS 1903479 1904033 . - 0 ID=cds-WP_005769732.1;Parent=gene-NYQ15_RS10030;Dbxref=GenBank:WP_005769732.1;Name=WP_005769732.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820971.1;locus_tag=NYQ15_RS10030;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_005769732.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1904046 1904990 . - . ID=gene-NYQ15_RS10035;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=NYQ15_RS10035 NZ_CP103431.1 Protein Homology CDS 1904046 1904990 . - 0 ID=cds-WP_005772142.1;Parent=gene-NYQ15_RS10035;Dbxref=GenBank:WP_005772142.1;Name=WP_005772142.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820972.1;locus_tag=NYQ15_RS10035;product=methionyl-tRNA formyltransferase;protein_id=WP_005772142.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1905178 1906104 . + . ID=gene-NYQ15_RS10040;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=NYQ15_RS10040 NZ_CP103431.1 Protein Homology CDS 1905178 1906104 . + 0 ID=cds-WP_012570936.1;Parent=gene-NYQ15_RS10040;Dbxref=GenBank:WP_012570936.1;Name=WP_012570936.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820973.1;locus_tag=NYQ15_RS10040;product=DNA-processing protein DprA;protein_id=WP_012570936.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1906101 1906580 . + . ID=gene-NYQ15_RS10045;Name=NYQ15_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10045 NZ_CP103431.1 Protein Homology CDS 1906101 1906580 . + 0 ID=cds-WP_011997413.1;Parent=gene-NYQ15_RS10045;Dbxref=GenBank:WP_011997413.1;Name=WP_011997413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820974.2;locus_tag=NYQ15_RS10045;product=DUF494 domain-containing protein;protein_id=WP_011997413.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1906583 1908880 . + . ID=gene-NYQ15_RS10050;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=NYQ15_RS10050 NZ_CP103431.1 Protein Homology CDS 1906583 1908880 . + 0 ID=cds-WP_259430983.1;Parent=gene-NYQ15_RS10050;Dbxref=GenBank:WP_259430983.1;Name=WP_259430983.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820975.1;locus_tag=NYQ15_RS10050;product=type I DNA topoisomerase;protein_id=WP_259430983.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1908894 1909046 . + . ID=gene-NYQ15_RS10635;Name=NYQ15_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10635 NZ_CP103431.1 Protein Homology CDS 1908894 1909046 . + 0 ID=cds-WP_005769747.1;Parent=gene-NYQ15_RS10635;Dbxref=GenBank:WP_005769747.1;Name=WP_005769747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769747.1;locus_tag=NYQ15_RS10635;product=hypothetical protein;protein_id=WP_005769747.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1909088 1909588 . + . ID=gene-NYQ15_RS10060;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=NYQ15_RS10060 NZ_CP103431.1 Protein Homology CDS 1909088 1909588 . + 0 ID=cds-WP_005769750.1;Parent=gene-NYQ15_RS10060;Dbxref=GenBank:WP_005769750.1;Name=WP_005769750.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820977.1;locus_tag=NYQ15_RS10060;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_005769750.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1909591 1910151 . + . ID=gene-NYQ15_RS10065;Name=NYQ15_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10065 NZ_CP103431.1 Protein Homology CDS 1909591 1910151 . + 0 ID=cds-WP_005769752.1;Parent=gene-NYQ15_RS10065;Dbxref=GenBank:WP_005769752.1;Name=WP_005769752.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820978.1;locus_tag=NYQ15_RS10065;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_005769752.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1910812 1911867 . - . ID=gene-NYQ15_RS10080;Name=NYQ15_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10080 NZ_CP103431.1 Protein Homology CDS 1910812 1911867 . - 0 ID=cds-WP_005769755.1;Parent=gene-NYQ15_RS10080;Dbxref=GenBank:WP_005769755.1;Name=WP_005769755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820979.1;locus_tag=NYQ15_RS10080;product=glycosyltransferase family 9 protein;protein_id=WP_005769755.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1911875 1913152 . - . ID=gene-NYQ15_RS10085;Name=NYQ15_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10085 NZ_CP103431.1 Protein Homology CDS 1911875 1913152 . - 0 ID=cds-WP_005769757.1;Parent=gene-NYQ15_RS10085;Dbxref=GenBank:WP_005769757.1;Name=WP_005769757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820980.1;locus_tag=NYQ15_RS10085;product=ATP-binding protein;protein_id=WP_005769757.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1913149 1913886 . - . ID=gene-NYQ15_RS10090;Name=NYQ15_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10090 NZ_CP103431.1 Protein Homology CDS 1913149 1913886 . - 0 ID=cds-WP_005772201.1;Parent=gene-NYQ15_RS10090;Dbxref=GenBank:WP_005772201.1;Name=WP_005772201.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820981.1;locus_tag=NYQ15_RS10090;product=response regulator;protein_id=WP_005772201.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1913935 1915122 . - . ID=gene-NYQ15_RS10095;Name=NYQ15_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10095 NZ_CP103431.1 Protein Homology CDS 1913935 1915122 . - 0 ID=cds-WP_259430984.1;Parent=gene-NYQ15_RS10095;Dbxref=GenBank:WP_259430984.1;Name=WP_259430984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820982.1;locus_tag=NYQ15_RS10095;product=CBU_2007 family Dot/Icm T4SS effector;protein_id=WP_259430984.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1915268 1917046 . + . ID=gene-NYQ15_RS10100;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=NYQ15_RS10100 NZ_CP103431.1 Protein Homology CDS 1915268 1917046 . + 0 ID=cds-WP_080592734.1;Parent=gene-NYQ15_RS10100;Dbxref=GenBank:WP_080592734.1;Name=WP_080592734.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820983.1;locus_tag=NYQ15_RS10100;product=arginine--tRNA ligase;protein_id=WP_080592734.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1917043 1918377 . + . ID=gene-NYQ15_RS10105;Name=NYQ15_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10105 NZ_CP103431.1 Protein Homology CDS 1917043 1918377 . + 0 ID=cds-WP_011997421.1;Parent=gene-NYQ15_RS10105;Dbxref=GenBank:WP_011997421.1;Name=WP_011997421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820984.2;locus_tag=NYQ15_RS10105;product=YdgA family protein;protein_id=WP_011997421.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1918374 1918688 . + . ID=gene-NYQ15_RS10110;Name=NYQ15_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10110 NZ_CP103431.1 Protein Homology CDS 1918374 1918688 . + 0 ID=cds-WP_012570939.1;Parent=gene-NYQ15_RS10110;Dbxref=GenBank:WP_012570939.1;Name=WP_012570939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820985.1;locus_tag=NYQ15_RS10110;product=hypothetical protein;protein_id=WP_012570939.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1918948 1919493 . + . ID=gene-NYQ15_RS10115;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=NYQ15_RS10115 NZ_CP103431.1 Protein Homology CDS 1918948 1919493 . + 0 ID=cds-WP_005769770.1;Parent=gene-NYQ15_RS10115;Dbxref=GenBank:WP_005769770.1;Name=WP_005769770.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769770.1;locus_tag=NYQ15_RS10115;product=ATP-dependent protease subunit HslV;protein_id=WP_005769770.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1919572 1920915 . + . ID=gene-NYQ15_RS10120;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=NYQ15_RS10120 NZ_CP103431.1 Protein Homology CDS 1919572 1920915 . + 0 ID=cds-WP_005769774.1;Parent=gene-NYQ15_RS10120;Dbxref=GenBank:WP_005769774.1;Name=WP_005769774.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820987.3;locus_tag=NYQ15_RS10120;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_005769774.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1920869 1921966 . - . ID=gene-NYQ15_RS10125;Name=NYQ15_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10125 NZ_CP103431.1 Protein Homology CDS 1920869 1921966 . - 0 ID=cds-WP_005769777.1;Parent=gene-NYQ15_RS10125;Dbxref=GenBank:WP_005769777.1;Name=WP_005769777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820988.1;locus_tag=NYQ15_RS10125;product=CBU_2013 family Dot/Icm T4SS effector;protein_id=WP_005769777.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1922290 1922673 . + . ID=gene-NYQ15_RS10130;Name=NYQ15_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10130 NZ_CP103431.1 Protein Homology CDS 1922290 1922673 . + 0 ID=cds-WP_010958601.1;Parent=gene-NYQ15_RS10130;Dbxref=GenBank:WP_010958601.1;Name=WP_010958601.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820989.1;locus_tag=NYQ15_RS10130;product=DUF421 domain-containing protein;protein_id=WP_010958601.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1922694 1924172 . - . ID=gene-NYQ15_RS10135;Name=NYQ15_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10135 NZ_CP103431.1 Protein Homology CDS 1922694 1924172 . - 0 ID=cds-WP_005769778.1;Parent=gene-NYQ15_RS10135;Dbxref=GenBank:WP_005769778.1;Name=WP_005769778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997427.1;locus_tag=NYQ15_RS10135;product=peptide MFS transporter;protein_id=WP_005769778.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1924354 1924950 . + . ID=gene-NYQ15_RS10140;Name=NYQ15_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10140 NZ_CP103431.1 Protein Homology CDS 1924354 1924950 . + 0 ID=cds-WP_011997428.1;Parent=gene-NYQ15_RS10140;Dbxref=GenBank:WP_011997428.1;Name=WP_011997428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820990.2;locus_tag=NYQ15_RS10140;product=CBU_2016 family Dot/Icm T4SS effector;protein_id=WP_011997428.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1925030 1925782 . + . ID=gene-NYQ15_RS10145;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=NYQ15_RS10145 NZ_CP103431.1 Protein Homology CDS 1925030 1925782 . + 0 ID=cds-WP_005769782.1;Parent=gene-NYQ15_RS10145;Dbxref=GenBank:WP_005769782.1;Name=WP_005769782.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820991.1;locus_tag=NYQ15_RS10145;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_005769782.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1925782 1926396 . + . ID=gene-NYQ15_RS10150;Name=NYQ15_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10150 NZ_CP103431.1 Protein Homology CDS 1925782 1926396 . + 0 ID=cds-WP_005772169.1;Parent=gene-NYQ15_RS10150;Dbxref=GenBank:WP_005772169.1;Name=WP_005772169.1;Ontology_term=GO:0032934;gbkey=CDS;go_function=sterol binding|0032934||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820992.2;locus_tag=NYQ15_RS10150;product=SCP2 domain-containing protein;protein_id=WP_005772169.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1926393 1927847 . + . ID=gene-NYQ15_RS10155;Name=ubiB;end_range=1927847,.;gbkey=Gene;gene=ubiB;gene_biotype=pseudogene;locus_tag=NYQ15_RS10155;partial=true;pseudo=true NZ_CP103431.1 Protein Homology CDS 1926393 1927847 . + 0 ID=cds-NYQ15_RS10155;Parent=gene-NYQ15_RS10155;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006744;end_range=1927847,.;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: protein motif:HMM:NF003404.0;locus_tag=NYQ15_RS10155;partial=true;product=ubiquinone biosynthesis regulatory protein kinase UbiB;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1927904 1928053 . + . ID=gene-NYQ15_RS10640;Name=NYQ15_RS10640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS10640;partial=true;pseudo=true;start_range=.,1927904 NZ_CP103431.1 Protein Homology CDS 1927904 1928053 . + 0 ID=cds-NYQ15_RS10640;Parent=gene-NYQ15_RS10640;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019479.5;locus_tag=NYQ15_RS10640;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1927904;transl_table=11 NZ_CP103431.1 RefSeq gene 1928423 1929853 . - . ID=gene-NYQ15_RS10160;Name=NYQ15_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10160 NZ_CP103431.1 Protein Homology CDS 1928423 1929853 . - 0 ID=cds-WP_010958606.1;Parent=gene-NYQ15_RS10160;Dbxref=GenBank:WP_010958606.1;Name=WP_010958606.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820994.1;locus_tag=NYQ15_RS10160;product=amino acid permease;protein_id=WP_010958606.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1929915 1931210 . - . ID=gene-NYQ15_RS10165;Name=NYQ15_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10165 NZ_CP103431.1 Protein Homology CDS 1929915 1931210 . - 0 ID=cds-WP_011997431.1;Parent=gene-NYQ15_RS10165;Dbxref=GenBank:WP_011997431.1;Name=WP_011997431.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820995.2;locus_tag=NYQ15_RS10165;product=ATP-binding protein;protein_id=WP_011997431.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1931259 1932677 . - . ID=gene-NYQ15_RS10170;Name=NYQ15_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10170 NZ_CP103431.1 Protein Homology CDS 1931259 1932677 . - 0 ID=cds-WP_259430985.1;Parent=gene-NYQ15_RS10170;Dbxref=GenBank:WP_259430985.1;Name=WP_259430985.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769795.1;locus_tag=NYQ15_RS10170;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_259430985.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1932684 1932929 . - . ID=gene-NYQ15_RS10175;Name=NYQ15_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10175 NZ_CP103431.1 Protein Homology CDS 1932684 1932929 . - 0 ID=cds-WP_005772157.1;Parent=gene-NYQ15_RS10175;Dbxref=GenBank:WP_005772157.1;Name=WP_005772157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820996.1;locus_tag=NYQ15_RS10175;product=accessory factor UbiK family protein;protein_id=WP_005772157.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1933007 1933957 . + . ID=gene-NYQ15_RS10180;Name=NYQ15_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10180 NZ_CP103431.1 Protein Homology CDS 1933007 1933957 . + 0 ID=cds-WP_005772186.1;Parent=gene-NYQ15_RS10180;Dbxref=GenBank:WP_005772186.1;Name=WP_005772186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820997.1;locus_tag=NYQ15_RS10180;product=pyridoxal-phosphate dependent enzyme;protein_id=WP_005772186.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1934036 1935199 . + . ID=gene-NYQ15_RS10185;Name=NYQ15_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10185 NZ_CP103431.1 Protein Homology CDS 1934036 1935199 . + 0 ID=cds-WP_005769800.1;Parent=gene-NYQ15_RS10185;Dbxref=GenBank:WP_005769800.1;Name=WP_005769800.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_820998.1;locus_tag=NYQ15_RS10185;product=cystathionine gamma-synthase;protein_id=WP_005769800.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1935359 1935892 . - . ID=gene-NYQ15_RS10190;Name=NYQ15_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10190 NZ_CP103431.1 Protein Homology CDS 1935359 1935892 . - 0 ID=cds-WP_052106978.1;Parent=gene-NYQ15_RS10190;Dbxref=GenBank:WP_052106978.1;Name=WP_052106978.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022461.5;locus_tag=NYQ15_RS10190;product=DUF2846 domain-containing protein;protein_id=WP_052106978.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1935941 1936228 . - . ID=gene-NYQ15_RS10195;Name=NYQ15_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10195 NZ_CP103431.1 Protein Homology CDS 1935941 1936228 . - 0 ID=cds-WP_005769804.1;Parent=gene-NYQ15_RS10195;Dbxref=GenBank:WP_005769804.1;Name=WP_005769804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821000.1;locus_tag=NYQ15_RS10195;product=hypothetical protein;protein_id=WP_005769804.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1936437 1937183 . - . ID=gene-NYQ15_RS10200;Name=NYQ15_RS10200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS10200;pseudo=true NZ_CP103431.1 Protein Homology CDS 1936437 1937183 . - 0 ID=cds-NYQ15_RS10200;Parent=gene-NYQ15_RS10200;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821001.1;locus_tag=NYQ15_RS10200;product=CBU_2028 family Dot/Icm T4SS effector;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1937277 1937909 . - . ID=gene-NYQ15_RS10205;Name=NYQ15_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10205 NZ_CP103431.1 Protein Homology CDS 1937277 1937909 . - 0 ID=cds-WP_005772184.1;Parent=gene-NYQ15_RS10205;Dbxref=GenBank:WP_005772184.1;Name=WP_005772184.1;Ontology_term=GO:0005515,GO:0070064;gbkey=CDS;go_function=protein binding|0005515||IEA,proline-rich region binding|0070064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821002.1;locus_tag=NYQ15_RS10205;product=SH3 domain-containing protein;protein_id=WP_005772184.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1938047 1939228 . + . ID=gene-NYQ15_RS10210;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=NYQ15_RS10210 NZ_CP103431.1 Protein Homology CDS 1938047 1939228 . + 0 ID=cds-WP_005772164.1;Parent=gene-NYQ15_RS10210;Dbxref=GenBank:WP_005772164.1;Name=WP_005772164.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821003.1;locus_tag=NYQ15_RS10210;product=methionine adenosyltransferase;protein_id=WP_005772164.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1939230 1940546 . + . ID=gene-NYQ15_RS10215;Name=ahcY;gbkey=Gene;gene=ahcY;gene_biotype=protein_coding;locus_tag=NYQ15_RS10215 NZ_CP103431.1 Protein Homology CDS 1939230 1940546 . + 0 ID=cds-WP_012570946.1;Parent=gene-NYQ15_RS10215;Dbxref=GenBank:WP_012570946.1;Name=WP_012570946.1;Ontology_term=GO:0006730,GO:0004013;gbkey=CDS;gene=ahcY;go_function=adenosylhomocysteinase activity|0004013||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821004.2;locus_tag=NYQ15_RS10215;product=adenosylhomocysteinase;protein_id=WP_012570946.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1940573 1941406 . + . ID=gene-NYQ15_RS10220;Name=NYQ15_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10220 NZ_CP103431.1 Protein Homology CDS 1940573 1941406 . + 0 ID=cds-WP_005769820.1;Parent=gene-NYQ15_RS10220;Dbxref=GenBank:WP_005769820.1;Name=WP_005769820.1;Ontology_term=GO:0005515,GO:0046872,GO:0052621;gbkey=CDS;go_function=protein binding|0005515||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769820.1;locus_tag=NYQ15_RS10220;product=sensor domain-containing diguanylate cyclase;protein_id=WP_005769820.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1941358 1941618 . - . ID=gene-NYQ15_RS10225;Name=NYQ15_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10225 NZ_CP103431.1 Protein Homology CDS 1941358 1941618 . - 0 ID=cds-WP_077019609.1;Parent=gene-NYQ15_RS10225;Dbxref=GenBank:WP_077019609.1;Name=WP_077019609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821006.1;locus_tag=NYQ15_RS10225;product=hypothetical protein;protein_id=WP_077019609.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1941742 1942233 . + . ID=gene-NYQ15_RS10230;Name=NYQ15_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10230 NZ_CP103431.1 Protein Homology CDS 1941742 1942233 . + 0 ID=cds-WP_259430986.1;Parent=gene-NYQ15_RS10230;Dbxref=GenBank:WP_259430986.1;Name=WP_259430986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220026.1;locus_tag=NYQ15_RS10230;product=hypothetical protein;protein_id=WP_259430986.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1942407 1942847 . + . ID=gene-NYQ15_RS10235;Name=NYQ15_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10235 NZ_CP103431.1 Protein Homology CDS 1942407 1942847 . + 0 ID=cds-WP_172401463.1;Parent=gene-NYQ15_RS10235;Dbxref=GenBank:WP_172401463.1;Name=WP_172401463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220024.1;locus_tag=NYQ15_RS10235;product=hypothetical protein;protein_id=WP_172401463.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1943121 1943540 . + . ID=gene-NYQ15_RS10240;Name=NYQ15_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10240 NZ_CP103431.1 GeneMarkS-2+ CDS 1943121 1943540 . + 0 ID=cds-WP_230454379.1;Parent=gene-NYQ15_RS10240;Dbxref=GenBank:WP_230454379.1;Name=WP_230454379.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS10240;product=hypothetical protein;protein_id=WP_230454379.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1943562 1944866 . + . ID=gene-NYQ15_RS10245;Name=NYQ15_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10245 NZ_CP103431.1 Protein Homology CDS 1943562 1944866 . + 0 ID=cds-WP_259431118.1;Parent=gene-NYQ15_RS10245;Dbxref=GenBank:WP_259431118.1;Name=WP_259431118.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012869.5;locus_tag=NYQ15_RS10245;product=ATP-binding cassette domain-containing protein;protein_id=WP_259431118.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1944863 1945675 . + . ID=gene-NYQ15_RS10250;Name=NYQ15_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10250 NZ_CP103431.1 Protein Homology CDS 1944863 1945675 . + 0 ID=cds-WP_259430987.1;Parent=gene-NYQ15_RS10250;Dbxref=GenBank:WP_259430987.1;Name=WP_259430987.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012869.5;locus_tag=NYQ15_RS10250;product=ABC transporter transmembrane domain-containing protein;protein_id=WP_259430987.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1945669 1946973 . + . ID=gene-NYQ15_RS10255;Name=NYQ15_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10255 NZ_CP103431.1 Protein Homology CDS 1945669 1946973 . + 0 ID=cds-WP_032075246.1;Parent=gene-NYQ15_RS10255;Dbxref=GenBank:WP_032075246.1;Name=WP_032075246.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF012235.5;locus_tag=NYQ15_RS10255;product=peptidase domain-containing ABC transporter;protein_id=WP_032075246.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1946970 1948301 . + . ID=gene-NYQ15_RS10260;Name=NYQ15_RS10260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS10260;pseudo=true NZ_CP103431.1 Protein Homology CDS 1946970 1948301 . + 0 ID=cds-NYQ15_RS10260;Parent=gene-NYQ15_RS10260;Note=frameshifted;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821012.1;locus_tag=NYQ15_RS10260;product=HlyD family type I secretion periplasmic adaptor subunit;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1948327 1948662 . + . ID=gene-NYQ15_RS10265;Name=NYQ15_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10265 NZ_CP103431.1 Protein Homology CDS 1948327 1948662 . + 0 ID=cds-WP_259411844.1;Parent=gene-NYQ15_RS10265;Dbxref=GenBank:WP_259411844.1;Name=WP_259411844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821013.2;locus_tag=NYQ15_RS10265;product=PAS domain S-box protein;protein_id=WP_259411844.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1948659 1949114 . + . ID=gene-NYQ15_RS10270;Name=NYQ15_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10270 NZ_CP103431.1 GeneMarkS-2+ CDS 1948659 1949114 . + 0 ID=cds-WP_259430988.1;Parent=gene-NYQ15_RS10270;Dbxref=GenBank:WP_259430988.1;Name=WP_259430988.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS10270;product=PAS domain-containing protein;protein_id=WP_259430988.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1949093 1950391 . + . ID=gene-NYQ15_RS10275;Name=NYQ15_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10275 NZ_CP103431.1 Protein Homology CDS 1949093 1950391 . + 0 ID=cds-WP_259430989.1;Parent=gene-NYQ15_RS10275;Dbxref=GenBank:WP_259430989.1;Name=WP_259430989.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012772.5;locus_tag=NYQ15_RS10275;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_259430989.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1950460 1951203 . + . ID=gene-NYQ15_RS10280;Name=NYQ15_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10280 NZ_CP103431.1 GeneMarkS-2+ CDS 1950460 1951203 . + 0 ID=cds-WP_242438556.1;Parent=gene-NYQ15_RS10280;Dbxref=GenBank:WP_242438556.1;Name=WP_242438556.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS10280;product=hypothetical protein;protein_id=WP_242438556.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1951234 1951455 . + . ID=gene-NYQ15_RS10285;Name=NYQ15_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10285 NZ_CP103431.1 GeneMarkS-2+ CDS 1951234 1951455 . + 0 ID=cds-WP_242438554.1;Parent=gene-NYQ15_RS10285;Dbxref=GenBank:WP_242438554.1;Name=WP_242438554.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS10285;product=hypothetical protein;protein_id=WP_242438554.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1951413 1952771 . + . ID=gene-NYQ15_RS10290;Name=NYQ15_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10290 NZ_CP103431.1 GeneMarkS-2+ CDS 1951413 1952771 . + 0 ID=cds-WP_242438552.1;Parent=gene-NYQ15_RS10290;Dbxref=GenBank:WP_242438552.1;Name=WP_242438552.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS10290;product=chitinase;protein_id=WP_242438552.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1952941 1953015 . + . ID=gene-NYQ15_RS10645;Name=NYQ15_RS10645;end_range=1953015,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS10645;partial=true;pseudo=true NZ_CP103431.1 Protein Homology CDS 1952941 1953015 . + 0 ID=cds-NYQ15_RS10645;Parent=gene-NYQ15_RS10645;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1953015,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_819398.1;locus_tag=NYQ15_RS10645;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1953081 1953953 . - . ID=gene-NYQ15_RS10300;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=NYQ15_RS10300 NZ_CP103431.1 Protein Homology CDS 1953081 1953953 . - 0 ID=cds-WP_005769837.1;Parent=gene-NYQ15_RS10300;Dbxref=GenBank:WP_005769837.1;Name=WP_005769837.1;Ontology_term=GO:0009086,GO:0004489,GO:0005829;gbkey=CDS;gene=metF;go_component=cytosol|0005829||IEA;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821018.1;locus_tag=NYQ15_RS10300;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=WP_005769837.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1953971 1956298 . - . ID=gene-NYQ15_RS10305;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=NYQ15_RS10305 NZ_CP103431.1 Protein Homology CDS 1953971 1956298 . - 0 ID=cds-WP_005772138.1;Parent=gene-NYQ15_RS10305;Dbxref=GenBank:WP_005772138.1;Name=WP_005772138.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821019.1;locus_tag=NYQ15_RS10305;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_005772138.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1956483 1957553 . - . ID=gene-NYQ15_RS10310;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=NYQ15_RS10310 NZ_CP103431.1 Protein Homology CDS 1956483 1957553 . - 0 ID=cds-WP_005769841.1;Parent=gene-NYQ15_RS10310;Dbxref=GenBank:WP_005769841.1;Name=WP_005769841.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821020.1;locus_tag=NYQ15_RS10310;product=tryptophan--tRNA ligase;protein_id=WP_005769841.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1957585 1958169 . - . ID=gene-NYQ15_RS10315;Name=NYQ15_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10315 NZ_CP103431.1 Protein Homology CDS 1957585 1958169 . - 0 ID=cds-WP_032075249.1;Parent=gene-NYQ15_RS10315;Dbxref=GenBank:WP_032075249.1;Name=WP_032075249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253275.1;locus_tag=NYQ15_RS10315;product=hypothetical protein;protein_id=WP_032075249.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1958405 1958623 . - . ID=gene-NYQ15_RS10320;Name=NYQ15_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10320 NZ_CP103431.1 GeneMarkS-2+ CDS 1958405 1958623 . - 0 ID=cds-WP_259411706.1;Parent=gene-NYQ15_RS10320;Dbxref=GenBank:WP_259411706.1;Name=WP_259411706.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS10320;product=hypothetical protein;protein_id=WP_259411706.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1958750 1958989 . - . ID=gene-NYQ15_RS10325;Name=NYQ15_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10325 NZ_CP103431.1 Protein Homology CDS 1958750 1958989 . - 0 ID=cds-WP_005769844.1;Parent=gene-NYQ15_RS10325;Dbxref=GenBank:WP_005769844.1;Name=WP_005769844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002333049.1;locus_tag=NYQ15_RS10325;product=hypothetical protein;protein_id=WP_005769844.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1959053 1959955 . - . ID=gene-NYQ15_RS10330;Name=coxCC15;gbkey=Gene;gene=coxCC15;gene_biotype=protein_coding;locus_tag=NYQ15_RS10330 NZ_CP103431.1 Protein Homology CDS 1959053 1959955 . - 0 ID=cds-WP_259430990.1;Parent=gene-NYQ15_RS10330;Dbxref=GenBank:WP_259430990.1;Name=WP_259430990.1;gbkey=CDS;gene=coxCC15;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821023.1;locus_tag=NYQ15_RS10330;product=Dot/Icm T4SS effector CoxCC15;protein_id=WP_259430990.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1960330 1962501 . + . ID=gene-NYQ15_RS10335;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=NYQ15_RS10335 NZ_CP103431.1 Protein Homology CDS 1960330 1962501 . + 0 ID=cds-WP_098953087.1;Parent=gene-NYQ15_RS10335;Dbxref=GenBank:WP_098953087.1;Name=WP_098953087.1;Ontology_term=GO:0006268,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821025.2;locus_tag=NYQ15_RS10335;product=DNA helicase II;protein_id=WP_098953087.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1962498 1963211 . + . ID=gene-NYQ15_RS10340;Name=NYQ15_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10340 NZ_CP103431.1 Protein Homology CDS 1962498 1963211 . + 0 ID=cds-WP_005769852.1;Parent=gene-NYQ15_RS10340;Dbxref=GenBank:WP_005769852.1;Name=WP_005769852.1;Ontology_term=GO:0030001,GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821026.1;locus_tag=NYQ15_RS10340;product=ZIP family metal transporter;protein_id=WP_005769852.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1963257 1963919 . - . ID=gene-NYQ15_RS10345;Name=NYQ15_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10345 NZ_CP103431.1 Protein Homology CDS 1963257 1963919 . - 0 ID=cds-WP_080720836.1;Parent=gene-NYQ15_RS10345;Dbxref=GenBank:WP_080720836.1;Name=WP_080720836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821027.2;locus_tag=NYQ15_RS10345;product=CBU_2056 family Dot/Icm T4SS effector;protein_id=WP_080720836.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1964108 1965085 . - . ID=gene-NYQ15_RS10350;Name=NYQ15_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10350 NZ_CP103431.1 Protein Homology CDS 1964108 1965085 . - 0 ID=cds-WP_259423756.1;Parent=gene-NYQ15_RS10350;Dbxref=GenBank:WP_259423756.1;Name=WP_259423756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821028.1;locus_tag=NYQ15_RS10350;product=DUF4351 domain-containing protein;protein_id=WP_259423756.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1965503 1966831 . - . ID=gene-NYQ15_RS10360;Name=NYQ15_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10360 NZ_CP103431.1 Protein Homology CDS 1965503 1966831 . - 0 ID=cds-WP_259430991.1;Parent=gene-NYQ15_RS10360;Dbxref=GenBank:WP_259430991.1;Name=WP_259430991.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821029.1;locus_tag=NYQ15_RS10360;product=MFS transporter;protein_id=WP_259430991.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1967009 1968601 . - . ID=gene-NYQ15_RS10365;Name=NYQ15_RS10365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS10365;pseudo=true NZ_CP103431.1 Protein Homology CDS 1967009 1968601 . - 0 ID=cds-NYQ15_RS10365;Parent=gene-NYQ15_RS10365;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997457.1;locus_tag=NYQ15_RS10365;product=CBUD_2154 family Dot/Icm T4SS effector;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1968739 1968843 . - . ID=gene-NYQ15_RS10370;Name=NYQ15_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10370 NZ_CP103431.1 Protein Homology CDS 1968739 1968843 . - 0 ID=cds-WP_230454383.1;Parent=gene-NYQ15_RS10370;Dbxref=GenBank:WP_230454383.1;Name=WP_230454383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821032.1;locus_tag=NYQ15_RS10370;product=hypothetical protein;protein_id=WP_230454383.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1968805 1969218 . + . ID=gene-NYQ15_RS10375;Name=NYQ15_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10375 NZ_CP103431.1 GeneMarkS-2+ CDS 1968805 1969218 . + 0 ID=cds-WP_259411845.1;Parent=gene-NYQ15_RS10375;Dbxref=GenBank:WP_259411845.1;Name=WP_259411845.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS10375;product=hypothetical protein;protein_id=WP_259411845.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1969188 1970273 . + . ID=gene-NYQ15_RS10380;Name=NYQ15_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10380 NZ_CP103431.1 GeneMarkS-2+ CDS 1969188 1970273 . + 0 ID=cds-WP_259430992.1;Parent=gene-NYQ15_RS10380;Dbxref=GenBank:WP_259430992.1;Name=WP_259430992.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NYQ15_RS10380;product=hypothetical protein;protein_id=WP_259430992.1;transl_table=11 NZ_CP103431.1 RefSeq pseudogene 1970312 1970949 . - . ID=gene-NYQ15_RS10385;Name=NYQ15_RS10385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NYQ15_RS10385;pseudo=true NZ_CP103431.1 Protein Homology CDS 1970312 1970949 . - 0 ID=cds-NYQ15_RS10385;Parent=gene-NYQ15_RS10385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821036.1;locus_tag=NYQ15_RS10385;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP103431.1 RefSeq gene 1970930 1971754 . - . ID=gene-NYQ15_RS10390;Name=NYQ15_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10390 NZ_CP103431.1 Protein Homology CDS 1970930 1971754 . - 0 ID=cds-WP_259430993.1;Parent=gene-NYQ15_RS10390;Dbxref=GenBank:WP_259430993.1;Name=WP_259430993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769864.1;locus_tag=NYQ15_RS10390;product=sulfite exporter TauE/SafE family protein;protein_id=WP_259430993.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1971766 1973166 . - . ID=gene-NYQ15_RS10395;Name=NYQ15_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10395 NZ_CP103431.1 Protein Homology CDS 1971766 1973166 . - 0 ID=cds-WP_077019610.1;Parent=gene-NYQ15_RS10395;Dbxref=GenBank:WP_077019610.1;Name=WP_077019610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821037.2;locus_tag=NYQ15_RS10395;product=MFS transporter;protein_id=WP_077019610.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1973105 1974445 . - . ID=gene-NYQ15_RS10400;Name=NYQ15_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10400 NZ_CP103431.1 Protein Homology CDS 1973105 1974445 . - 0 ID=cds-WP_098953085.1;Parent=gene-NYQ15_RS10400;Dbxref=GenBank:WP_098953085.1;Name=WP_098953085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821038.1;locus_tag=NYQ15_RS10400;product=MFS transporter;protein_id=WP_098953085.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1974586 1975176 . - . ID=gene-NYQ15_RS10405;Name=NYQ15_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10405 NZ_CP103431.1 Protein Homology CDS 1974586 1975176 . - 0 ID=cds-WP_005769872.1;Parent=gene-NYQ15_RS10405;Dbxref=GenBank:WP_005769872.1;Name=WP_005769872.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821039.1;locus_tag=NYQ15_RS10405;product=thymidine kinase;protein_id=WP_005769872.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1975193 1975603 . - . ID=gene-NYQ15_RS10410;Name=NYQ15_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10410 NZ_CP103431.1 Protein Homology CDS 1975193 1975603 . - 0 ID=cds-WP_005769874.1;Parent=gene-NYQ15_RS10410;Dbxref=GenBank:WP_005769874.1;Name=WP_005769874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821040.1;locus_tag=NYQ15_RS10410;product=chorismate mutase;protein_id=WP_005769874.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1975679 1976161 . + . ID=gene-NYQ15_RS10415;Name=NYQ15_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10415 NZ_CP103431.1 Protein Homology CDS 1975679 1976161 . + 0 ID=cds-WP_005769876.1;Parent=gene-NYQ15_RS10415;Dbxref=GenBank:WP_005769876.1;Name=WP_005769876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821041.1;locus_tag=NYQ15_RS10415;product=DUF6790 family protein;protein_id=WP_005769876.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1976382 1976879 . + . ID=gene-NYQ15_RS10420;Name=eirA;gbkey=Gene;gene=eirA;gene_biotype=protein_coding;locus_tag=NYQ15_RS10420 NZ_CP103431.1 Protein Homology CDS 1976382 1976879 . + 0 ID=cds-WP_005769879.1;Parent=gene-NYQ15_RS10420;Dbxref=GenBank:WP_005769879.1;Name=WP_005769879.1;gbkey=CDS;gene=eirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821042.1;locus_tag=NYQ15_RS10420;product=T4SS-associated protein EirA;protein_id=WP_005769879.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1976915 1977817 . + . ID=gene-NYQ15_RS10425;Name=NYQ15_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10425 NZ_CP103431.1 Protein Homology CDS 1976915 1977817 . + 0 ID=cds-WP_005769881.1;Parent=gene-NYQ15_RS10425;Dbxref=GenBank:WP_005769881.1;Name=WP_005769881.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821043.1;locus_tag=NYQ15_RS10425;product=acyltransferase;protein_id=WP_005769881.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1977801 1978724 . + . ID=gene-NYQ15_RS10430;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=NYQ15_RS10430 NZ_CP103431.1 Protein Homology CDS 1977801 1978724 . + 0 ID=cds-WP_005769883.1;Parent=gene-NYQ15_RS10430;Dbxref=GenBank:WP_005769883.1;Name=WP_005769883.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821044.1;locus_tag=NYQ15_RS10430;product=hydroxymethylbilane synthase;protein_id=WP_005769883.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1978724 1979425 . + . ID=gene-NYQ15_RS10435;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=NYQ15_RS10435 NZ_CP103431.1 Protein Homology CDS 1978724 1979425 . + 0 ID=cds-WP_005772174.1;Parent=gene-NYQ15_RS10435;Dbxref=GenBank:WP_005772174.1;Name=WP_005772174.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821045.1;locus_tag=NYQ15_RS10435;product=type I 3-dehydroquinate dehydratase;protein_id=WP_005772174.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1979435 1979752 . + . ID=gene-NYQ15_RS10440;Name=NYQ15_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10440 NZ_CP103431.1 Protein Homology CDS 1979435 1979752 . + 0 ID=cds-WP_005769887.1;Parent=gene-NYQ15_RS10440;Dbxref=GenBank:WP_005769887.1;Name=WP_005769887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821046.1;locus_tag=NYQ15_RS10440;product=CBU_2076 family Dot/Icm type IV secretion system effector;protein_id=WP_005769887.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1979742 1980548 . + . ID=gene-NYQ15_RS10445;Name=NYQ15_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10445 NZ_CP103431.1 Protein Homology CDS 1979742 1980548 . + 0 ID=cds-WP_005769890.1;Parent=gene-NYQ15_RS10445;Dbxref=GenBank:WP_005769890.1;Name=WP_005769890.1;Ontology_term=GO:0006780,GO:0006782,GO:0004852;gbkey=CDS;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA,protoporphyrinogen IX biosynthetic process|0006782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821047.1;locus_tag=NYQ15_RS10445;product=uroporphyrinogen-III synthase;protein_id=WP_005769890.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1980693 1981739 . - . ID=gene-NYQ15_RS10460;Name=coxFIC1;gbkey=Gene;gene=coxFIC1;gene_biotype=protein_coding;locus_tag=NYQ15_RS10460 NZ_CP103431.1 Protein Homology CDS 1980693 1981739 . - 0 ID=cds-WP_005769896.1;Parent=gene-NYQ15_RS10460;Dbxref=GenBank:WP_005769896.1;Name=WP_005769896.1;gbkey=CDS;gene=coxFIC1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821048.1;locus_tag=NYQ15_RS10460;product=Dot/Icm type IV secretion system effector CoxFIC1;protein_id=WP_005769896.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1982049 1982453 . + . ID=gene-NYQ15_RS10465;Name=NYQ15_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10465 NZ_CP103431.1 Protein Homology CDS 1982049 1982453 . + 0 ID=cds-WP_010958637.1;Parent=gene-NYQ15_RS10465;Dbxref=GenBank:WP_010958637.1;Name=WP_010958637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821049.1;locus_tag=NYQ15_RS10465;product=hypothetical protein;protein_id=WP_010958637.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1982534 1983496 . + . ID=gene-NYQ15_RS10470;Name=NYQ15_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10470 NZ_CP103431.1 Protein Homology CDS 1982534 1983496 . + 0 ID=cds-WP_080592796.1;Parent=gene-NYQ15_RS10470;Dbxref=GenBank:WP_080592796.1;Name=WP_080592796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821050.2;locus_tag=NYQ15_RS10470;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_080592796.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1983501 1984679 . + . ID=gene-NYQ15_RS10475;Name=NYQ15_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10475 NZ_CP103431.1 Protein Homology CDS 1983501 1984679 . + 0 ID=cds-WP_005772915.1;Parent=gene-NYQ15_RS10475;Dbxref=GenBank:WP_005772915.1;Name=WP_005772915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821051.1;locus_tag=NYQ15_RS10475;product=heme biosynthesis protein HemY;protein_id=WP_005772915.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1984682 1985449 . + . ID=gene-NYQ15_RS10480;Name=NYQ15_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10480 NZ_CP103431.1 Protein Homology CDS 1984682 1985449 . + 0 ID=cds-WP_005769907.1;Parent=gene-NYQ15_RS10480;Dbxref=GenBank:WP_005769907.1;Name=WP_005769907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821052.2;locus_tag=NYQ15_RS10480;product=phosphodiester glycosidase family protein;protein_id=WP_005769907.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1985521 1986201 . + . ID=gene-NYQ15_RS10485;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=NYQ15_RS10485 NZ_CP103431.1 Protein Homology CDS 1985521 1986201 . + 0 ID=cds-WP_005769910.1;Parent=gene-NYQ15_RS10485;Dbxref=GenBank:WP_005769910.1;Name=WP_005769910.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772910.1;locus_tag=NYQ15_RS10485;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_005769910.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1987120 1988376 . - . ID=gene-NYQ15_RS10490;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=NYQ15_RS10490 NZ_CP103431.1 Protein Homology CDS 1987120 1988376 . - 0 ID=cds-WP_005769919.1;Parent=gene-NYQ15_RS10490;Dbxref=GenBank:WP_005769919.1;Name=WP_005769919.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821056.1;locus_tag=NYQ15_RS10490;product=transcription termination factor Rho;protein_id=WP_005769919.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1988552 1988890 . - . ID=gene-NYQ15_RS10495;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=NYQ15_RS10495 NZ_CP103431.1 Protein Homology CDS 1988552 1988890 . - 0 ID=cds-WP_032075265.1;Parent=gene-NYQ15_RS10495;Dbxref=GenBank:WP_032075265.1;Name=WP_032075265.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821057.1;locus_tag=NYQ15_RS10495;product=thioredoxin TrxA;protein_id=WP_032075265.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1989303 1990655 . + . ID=gene-NYQ15_RS10505;Name=NYQ15_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10505 NZ_CP103431.1 Protein Homology CDS 1989303 1990655 . + 0 ID=cds-WP_012570955.1;Parent=gene-NYQ15_RS10505;Dbxref=GenBank:WP_012570955.1;Name=WP_012570955.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821058.1;locus_tag=NYQ15_RS10505;product=sodium-dependent transporter;protein_id=WP_012570955.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1990750 1991331 . - . ID=gene-NYQ15_RS10510;Name=NYQ15_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10510 NZ_CP103431.1 Protein Homology CDS 1990750 1991331 . - 0 ID=cds-WP_011997466.1;Parent=gene-NYQ15_RS10510;Dbxref=GenBank:WP_011997466.1;Name=WP_011997466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821059.2;locus_tag=NYQ15_RS10510;product=YggT family protein;protein_id=WP_011997466.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1991328 1992152 . - . ID=gene-NYQ15_RS10515;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=NYQ15_RS10515 NZ_CP103431.1 Protein Homology CDS 1991328 1992152 . - 0 ID=cds-WP_005769923.1;Parent=gene-NYQ15_RS10515;Dbxref=GenBank:WP_005769923.1;Name=WP_005769923.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821060.1;locus_tag=NYQ15_RS10515;product=pyrroline-5-carboxylate reductase;protein_id=WP_005769923.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1992149 1992835 . - . ID=gene-NYQ15_RS10520;Name=NYQ15_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10520 NZ_CP103431.1 Protein Homology CDS 1992149 1992835 . - 0 ID=cds-WP_005769924.1;Parent=gene-NYQ15_RS10520;Dbxref=GenBank:WP_005769924.1;Name=WP_005769924.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821061.1;locus_tag=NYQ15_RS10520;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_005769924.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1992825 1994378 . - . ID=gene-NYQ15_RS10525;Name=NYQ15_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10525 NZ_CP103431.1 Protein Homology CDS 1992825 1994378 . - 0 ID=cds-WP_259430994.1;Parent=gene-NYQ15_RS10525;Dbxref=GenBank:WP_259430994.1;Name=WP_259430994.1;Ontology_term=GO:0006094,GO:0004611,GO:0005524,GO:0017076;gbkey=CDS;go_function=phosphoenolpyruvate carboxykinase activity|0004611||IEA,ATP binding|0005524||IEA,purine nucleotide binding|0017076||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821062.1;locus_tag=NYQ15_RS10525;product=phosphoenolpyruvate carboxykinase;protein_id=WP_259430994.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1994473 1995057 . + . ID=gene-NYQ15_RS10530;Name=NYQ15_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10530 NZ_CP103431.1 Protein Homology CDS 1994473 1995057 . + 0 ID=cds-WP_010958648.1;Parent=gene-NYQ15_RS10530;Dbxref=GenBank:WP_010958648.1;Name=WP_010958648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821063.2;locus_tag=NYQ15_RS10530;product=YqgE/AlgH family protein;protein_id=WP_010958648.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1995050 1995475 . + . ID=gene-NYQ15_RS10535;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=NYQ15_RS10535 NZ_CP103431.1 Protein Homology CDS 1995050 1995475 . + 0 ID=cds-WP_259430995.1;Parent=gene-NYQ15_RS10535;Dbxref=GenBank:WP_259430995.1;Name=WP_259430995.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821064.2;locus_tag=NYQ15_RS10535;product=Holliday junction resolvase RuvX;protein_id=WP_259430995.1;transl_table=11 NZ_CP103431.1 RefSeq gene 1995468 1996400 . + . ID=gene-NYQ15_RS10540;Name=NYQ15_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NYQ15_RS10540 NZ_CP103431.1 Protein Homology CDS 1995468 1996400 . + 0 ID=cds-WP_010958650.1;Parent=gene-NYQ15_RS10540;Dbxref=GenBank:WP_010958650.1;Name=WP_010958650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_821065.1;locus_tag=NYQ15_RS10540;product=aspartate carbamoyltransferase;protein_id=WP_010958650.1;transl_table=11 ###